Citrus Sinensis ID: 027816
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 218 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ASX2 | 266 | Tropinone reductase homol | no | no | 0.940 | 0.770 | 0.610 | 4e-70 | |
| P50165 | 268 | Tropinone reductase homol | N/A | no | 0.944 | 0.768 | 0.597 | 2e-67 | |
| P50162 | 273 | Tropinone reductase 1 OS= | N/A | no | 0.922 | 0.736 | 0.592 | 2e-64 | |
| P50163 | 260 | Tropinone reductase 2 OS= | N/A | no | 0.903 | 0.757 | 0.593 | 2e-61 | |
| P50164 | 260 | Tropinone reductase 2 OS= | N/A | no | 0.903 | 0.757 | 0.578 | 3e-61 | |
| P16542 | 272 | Granaticin polyketide syn | N/A | no | 0.848 | 0.680 | 0.371 | 2e-24 | |
| Q8WNV7 | 279 | Dehydrogenase/reductase S | yes | no | 0.866 | 0.677 | 0.340 | 3e-22 | |
| Q8SPU8 | 279 | Dehydrogenase/reductase S | yes | no | 0.922 | 0.720 | 0.328 | 5e-22 | |
| Q99LB2 | 279 | Dehydrogenase/reductase S | yes | no | 0.899 | 0.702 | 0.343 | 5e-22 | |
| Q9BTZ2 | 278 | Dehydrogenase/reductase S | yes | no | 0.908 | 0.712 | 0.34 | 1e-21 |
| >sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 264 bits (674), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/208 (61%), Positives = 155/208 (74%), Gaps = 3/208 (1%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA AE +S RWSLK T LVTGGT+GIG A VEE AG GAV+HTC+RNE ELN+CL +
Sbjct: 1 MAGAE---QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK 57
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF V+GSVCDA+ +REKL+Q V S F GKL+IL+NN+G KPT++Y+AE++S
Sbjct: 58 WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS 117
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++TN ES YHL QL +PLLKASG G+I+F+SS+ G+ GSIY ATK A+NQL RN
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARN 177
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERV 208
LACEWA D IR N+VAP T L E V
Sbjct: 178 LACEWASDGIRANAVAPAVIATPLAEAV 205
|
Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 155/206 (75%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA E RWSL+GMTALVTGGTRGIG A VEELA GA V+TCSR++ +L++CL++
Sbjct: 1 MAGREIGGGDRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEK 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W+ KGF VSG VCD +S QR+ L++ V S FNGKLNIL+NN GT I K ++AE+YS
Sbjct: 61 WRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
IM TNFE++Y+LCQL +PLLKASG SIVF SS G+ V SIY A+K A+NQ+T++
Sbjct: 121 IIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKS 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVE 206
LACEWAKD+IR N+VAPW T ++E
Sbjct: 181 LACEWAKDSIRVNAVAPWIINTPIIE 206
|
Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/201 (59%), Positives = 151/201 (75%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSLKG TALVTGG++GIG A VEELAGLGA V+TCSRNE EL++CL+ W+ KG V GS
Sbjct: 16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 75
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD S +R+KL+Q V F+GKLNILVNN G I K +++ ++Y+ IM TNFE+ Y
Sbjct: 76 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 135
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ YPLLKAS G+++F+SS+ G S + S S+Y A+K A+NQ+T++LACEWAKDNIR
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 195
Query: 192 TNSVAPWYTKTSLVERVMFSN 212
NSVAP T LVE + N
Sbjct: 196 VNSVAPGVILTPLVETAIKKN 216
|
Catalyzes the stereospecific reduction of tropinone to tropine. Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 0 EC: 6 |
| >sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 235 bits (599), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 143/197 (72%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ RW+L+G TALVTGG+RGIG VEELA LGA V+TCSRN+ ELN CL +W+SKGF V
Sbjct: 2 AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 61
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
SVCD +S +R++L+ V + F+GKLNILVNN G I K +Y+ E+YS IM+ NFE+
Sbjct: 62 ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 121
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL L +P LKAS G++VFISSV G V ++YGATK AM+QLTR LA EWAKDN
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 181
Query: 190 IRTNSVAPWYTKTSLVE 206
IR N V P TSLVE
Sbjct: 182 IRVNGVGPGVIATSLVE 198
|
Catalyzes the stereospecific reduction of tropinone to pseudotropine. Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 6 |
| >sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/197 (57%), Positives = 145/197 (73%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ RW+L+G TALVTGG+RGIG VEELA LGA V+TCSRN+ EL++CL +W+SKGF V
Sbjct: 2 AGRWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVE 61
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
SVCD +S +RE+ ++ V + F+GKLNILVNN G I K +Y+ E+YS IM+ NFE+
Sbjct: 62 ASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEA 121
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL L +P LKAS G++VFISS+ G S + ++YGATK AM+QLTR LA EWAKDN
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDN 181
Query: 190 IRTNSVAPWYTKTSLVE 206
IR N V P TS+VE
Sbjct: 182 IRVNGVGPGVIATSMVE 198
|
Catalyzes the stereospecific reduction of tropinone to pseudotropine. Hyoscyamus niger (taxid: 4079) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 6 |
| >sp|P16542|DHK1_STRVN Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
ALVTG T GIG A LA LGA C+R+E L + +KE + +GF V G+VCD A P
Sbjct: 20 ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPA 79
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
Q + ++ G ++ILVNN G + T E + E + ++TTN S + + + V
Sbjct: 80 QIRAYVAAAVQRY-GTVDILVNNAGRSGGGATAEIADELWLDVITTNLTSVFLMTKEV-- 136
Query: 140 LLKASGV-----GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
L A G+ G I+ I+S GG V Y A+K + LT+ L E A+ I N+
Sbjct: 137 -LNAGGMLAKKRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLELARTGITVNA 195
Query: 195 VAPWYTKTSLVERV 208
V P + +T + ERV
Sbjct: 196 VCPGFVETPMAERV 209
|
Streptomyces violaceoruber (taxid: 1935) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: - |
| >sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 105 bits (261), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
R L+ ALVT T GIG A LA GA V SR + +++ + Q +G V+G+
Sbjct: 28 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGT 87
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNF 127
VC + RE+L+ + +G ++ILV+N N P I+ + E + KI+ N
Sbjct: 88 VCHVGKAEDRERLVA-MAVNLHGGVDILVSNAAVN---PFFGNIIDATEEVWDKILHVNV 143
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
++T + + V P ++ G GS++ +SSVG + Y +K A+ LT+NLA E A
Sbjct: 144 KATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAP 203
Query: 188 DNIRTNSVAPWYTKTSL 204
NIR N +AP KT+
Sbjct: 204 RNIRVNCLAPGLIKTNF 220
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 3/204 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ R L ALVT T GIG A LA GA V SR + +++ + + +G V+
Sbjct: 26 ARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVT 85
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFE 128
G+VC + RE+L+ K +G ++IL++N + ++ E + KI+ N +
Sbjct: 86 GTVCHVGKAEDRERLVA-TAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVK 144
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+T L + V P + G GSIV +SS+ S S Y +K A+ LT+NLA E A+
Sbjct: 145 ATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAES 204
Query: 189 NIRTNSVAPWYTKTSLVERVMFSN 212
N+R N +AP +TS RV++ +
Sbjct: 205 NVRVNCLAPGLIRTSF-SRVLWED 227
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Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 2/198 (1%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
SS + R L ALVT T GIG A LA GA V SR + +++ + Q +G
Sbjct: 22 SSGLTRRNPLSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEG 81
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMT 124
V+G VC + REKLI + G ++ILV+N N ++ + E + K+++
Sbjct: 82 LSVTGIVCHVGKAEDREKLITTALKRHQG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLS 140
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N +T + + V P ++ G GS+V + SV G + S Y +K A+ LT+N A E
Sbjct: 141 INVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAE 200
Query: 185 WAKDNIRTNSVAPWYTKT 202
A NIR N +AP KT
Sbjct: 201 LAPKNIRVNCLAPGLIKT 218
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 102/200 (51%), Gaps = 2/200 (1%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
SS + R L ALVT T GIG A LA GA V SR + +++ + Q +G
Sbjct: 21 SSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEG 80
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-EYSAEEYSKIMT 124
V+G+VC + RE+L+ K +G ++ILV+N N +I + + E + K +
Sbjct: 81 LSVTGTVCHVGKAEDRERLVA-TAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLD 139
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N ++ + + V P ++ G GS+V +SS+ S S Y +K A+ LT+ LA E
Sbjct: 140 INVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIE 199
Query: 185 WAKDNIRTNSVAPWYTKTSL 204
A NIR N +AP KTS
Sbjct: 200 LAPRNIRVNCLAPGLIKTSF 219
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 218 | ||||||
| 255566458 | 272 | tropinone reductase, putative [Ricinus c | 0.958 | 0.768 | 0.803 | 1e-93 | |
| 224098461 | 266 | predicted protein [Populus trichocarpa] | 0.944 | 0.774 | 0.787 | 9e-91 | |
| 388514699 | 271 | unknown [Lotus japonicus] | 0.986 | 0.793 | 0.782 | 9e-89 | |
| 388490946 | 271 | unknown [Lotus japonicus] | 0.986 | 0.793 | 0.777 | 7e-88 | |
| 388501792 | 269 | unknown [Medicago truncatula] | 0.958 | 0.776 | 0.746 | 1e-87 | |
| 449465852 | 273 | PREDICTED: tropinone reductase homolog A | 0.958 | 0.765 | 0.751 | 2e-87 | |
| 225449410 | 268 | PREDICTED: tropinone reductase homolog A | 0.958 | 0.779 | 0.727 | 3e-87 | |
| 297810701 | 262 | hypothetical protein ARALYDRAFT_487407 [ | 0.908 | 0.755 | 0.772 | 2e-86 | |
| 225449408 | 268 | PREDICTED: tropinone reductase homolog A | 0.958 | 0.779 | 0.717 | 1e-85 | |
| 15239327 | 264 | tropine dehydrogenase [Arabidopsis thali | 0.908 | 0.75 | 0.757 | 2e-85 |
| >gi|255566458|ref|XP_002524214.1| tropinone reductase, putative [Ricinus communis] gi|223536491|gb|EEF38138.1| tropinone reductase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/209 (80%), Positives = 184/209 (88%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA AESSFK S WSL G TALVTGGTRGIG ATV ELA LGA VHTCSRN ELNKCLKE
Sbjct: 1 MAMAESSFKESIWSLHGRTALVTGGTRGIGNATVVELARLGARVHTCSRNGEELNKCLKE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W+ KG +V+GSVCDA+S QREKLI+EVGS FNG LNILVNNVGTNIRKPT EY+AEEYS
Sbjct: 61 WEEKGLLVTGSVCDASSRAQREKLIEEVGSVFNGSLNILVNNVGTNIRKPTNEYTAEEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+IM TNFES YH+CQL +PLLKASGVGSIVFISSV GL H+GSGSIYGATK A++QLT+N
Sbjct: 121 EIMITNFESAYHMCQLAHPLLKASGVGSIVFISSVAGLQHIGSGSIYGATKGAIHQLTKN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
LACEWAKDNIRTNSVAPWY +TSLVER++
Sbjct: 181 LACEWAKDNIRTNSVAPWYIRTSLVERLL 209
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224098461|ref|XP_002311182.1| predicted protein [Populus trichocarpa] gi|222851002|gb|EEE88549.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 338 bits (867), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 182/207 (87%), Gaps = 1/207 (0%)
Query: 4 AESS-FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62
AESS FK SRWSL GMTALVTGGTRGIG ATVEELAG GA VHTCSRNE ELNKCLKEW+
Sbjct: 2 AESSRFKDSRWSLHGMTALVTGGTRGIGNATVEELAGFGARVHTCSRNEEELNKCLKEWE 61
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
+KGFVV+GSVCDA+S QREKLI+EVGS F+GKLNILVNNVGTNIRKPT YSAEE+S +
Sbjct: 62 AKGFVVTGSVCDASSRVQREKLIEEVGSVFHGKLNILVNNVGTNIRKPTTGYSAEEFSNL 121
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ TNFES YHL Q+ +PLLK SG GS+VFISSV GL H+GSGSIYGA+K A+NQLT+NLA
Sbjct: 122 LATNFESAYHLSQIAHPLLKESGAGSVVFISSVAGLLHIGSGSIYGASKGAINQLTKNLA 181
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERVM 209
CEWAKDNIRTN VAPWY +TSLVE ++
Sbjct: 182 CEWAKDNIRTNCVAPWYIRTSLVEHLL 208
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388514699|gb|AFK45411.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 332 bits (850), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 169/216 (78%), Positives = 187/216 (86%), Gaps = 1/216 (0%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MAN ESS +SSRWSLKG TALVTGGTRGIG A VEELA GA V+TCSRNEVELN CLKE
Sbjct: 1 MANPESSSRSSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEVELNACLKE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF VSGSVCDA+SP QREKL + V S FNGKLNILVNNVGTNIRKPTIEY+AEEYS
Sbjct: 61 WQEKGFSVSGSVCDASSPPQREKLFELVASAFNGKLNILVNNVGTNIRKPTIEYTAEEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
K+M+TN +S +HL QL YPLLKASG GSIVFISSV L+HVGSG++Y A+KAA+NQLT+
Sbjct: 121 KLMSTNLDSAHHLSQLAYPLLKASGNGSIVFISSVAALAHVGSGAVYAASKAAINQLTKY 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVMFSNLSLI 216
LACEWAKDNIR+NSVAPWYTKTSLVE V+ SN L+
Sbjct: 181 LACEWAKDNIRSNSVAPWYTKTSLVEPVL-SNKELV 215
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388490946|gb|AFK33539.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 328 bits (842), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 168/216 (77%), Positives = 186/216 (86%), Gaps = 1/216 (0%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MAN ESS +SSRWSLKG TALVTGGTRGIG A VEELA GA V+TCSRNEVELN CLKE
Sbjct: 1 MANPESSSRSSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEVELNACLKE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF VSGSVCDA+SP QREKL + V S FNGKLNILVNNVGTNIRKPTIEY+AEEYS
Sbjct: 61 WQEKGFSVSGSVCDASSPPQREKLFELVASAFNGKLNILVNNVGTNIRKPTIEYTAEEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
K+M+TN +S +HL QL YPLLKASG GSIVFISSV L+HVGSG++Y A+KAA+NQLT+
Sbjct: 121 KLMSTNLDSAHHLSQLAYPLLKASGNGSIVFISSVAALAHVGSGAVYAASKAAINQLTKY 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVMFSNLSLI 216
LACEWAK NIR+NSVAPWYTKTSLVE V+ SN L+
Sbjct: 181 LACEWAKGNIRSNSVAPWYTKTSLVEPVL-SNKELV 215
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388501792|gb|AFK38962.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 156/209 (74%), Positives = 175/209 (83%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
M N ESS + SRWSLKG TALVTGGTRGIG A VEELA GA V TCSRNE ELNKCL E
Sbjct: 1 MENQESSMRGSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVFTCSRNEEELNKCLNE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W+ KGF V GSVCDA+SP QRE+LI++V S FNGKLNILV+N GTN+RKPTIEY+AE+YS
Sbjct: 61 WKEKGFSVYGSVCDASSPSQREELIRQVASAFNGKLNILVSNAGTNVRKPTIEYTAEDYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
K+MTTN +S YHLCQL YPLLK SG GSIVFISSV L VG+GSIY +KAA+NQLT+N
Sbjct: 121 KVMTTNLDSAYHLCQLAYPLLKESGNGSIVFISSVASLISVGTGSIYAVSKAAINQLTKN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
LACEWAKDNI +N VAPWYTKTSLVE+ +
Sbjct: 181 LACEWAKDNIGSNCVAPWYTKTSLVEQFI 209
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449465852|ref|XP_004150641.1| PREDICTED: tropinone reductase homolog At1g07440-like [Cucumis sativus] gi|449531117|ref|XP_004172534.1| PREDICTED: tropinone reductase homolog At1g07440-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 157/209 (75%), Positives = 177/209 (84%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA A S +SRWSL+G TALVTGGTRGIG A VEELAGLGA VHTC+RNE +LN+CLKE
Sbjct: 1 MAEASGSAGNSRWSLEGFTALVTGGTRGIGHAVVEELAGLGASVHTCARNESDLNQCLKE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W++KG+VV+GSVCDA+S QRE+LIQEV S FNG LNILVNNVGTNIRKP+ EYS EE S
Sbjct: 61 WEAKGYVVTGSVCDASSRTQREELIQEVASSFNGTLNILVNNVGTNIRKPSAEYSLEEVS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+MTTNFES +HL QL +PLLKASG GSIVFISSVGGL +GSGSIY ATK+A+NQLTRN
Sbjct: 121 TLMTTNFESAFHLSQLSHPLLKASGNGSIVFISSVGGLVSIGSGSIYAATKSAINQLTRN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
L CEWAKDNIR N VAPWY T LVE++M
Sbjct: 181 LTCEWAKDNIRVNCVAPWYINTPLVEKLM 209
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449410|ref|XP_002277835.1| PREDICTED: tropinone reductase homolog At1g07440 [Vitis vinifera] gi|296086189|emb|CBI31630.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/209 (72%), Positives = 177/209 (84%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA F SS WSL+G TALVTGGTRGIG A VEELAGLG+ VHTCSRNE EL+KCL+E
Sbjct: 1 MAEGNGGFSSSGWSLRGTTALVTGGTRGIGYAVVEELAGLGSTVHTCSRNEAELDKCLRE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W +KGF V+GSVCD + QRE+L+++V S FNGKLNIL+NNVGTNIRKPT++++A EYS
Sbjct: 61 WHAKGFAVTGSVCDGSDRAQREQLMEKVSSIFNGKLNILINNVGTNIRKPTVDFTAAEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
IMTTN ES YHLCQL +PLLKASG GSIVFISSV G+ +G+GSIY ATKAAMNQLT+N
Sbjct: 121 TIMTTNLESAYHLCQLAHPLLKASGAGSIVFISSVAGVLSLGTGSIYAATKAAMNQLTKN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
L+CEWAKDNIR+NSVAPWY KTSLVE ++
Sbjct: 181 LSCEWAKDNIRSNSVAPWYIKTSLVEHLL 209
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297810701|ref|XP_002873234.1| hypothetical protein ARALYDRAFT_487407 [Arabidopsis lyrata subsp. lyrata] gi|297319071|gb|EFH49493.1| hypothetical protein ARALYDRAFT_487407 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/198 (77%), Positives = 171/198 (86%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL G TALVTGGTRGIG+A VEELA GA VHTCSRN+ ELN CL +W+S G VVSGS
Sbjct: 6 RWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKSNGLVVSGS 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA+ DQREKLIQE S F+GKLNILVNNVGTN+RKPT+EYS+EEY+KIMTTN ES +
Sbjct: 66 VCDASVRDQREKLIQEASSAFSGKLNILVNNVGTNVRKPTVEYSSEEYAKIMTTNLESAF 125
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ +PLLKASGVGSIVFISSV GL H+ SGSIYGATK A+NQLTRNLACEWA+DNIR
Sbjct: 126 HLSQIAHPLLKASGVGSIVFISSVAGLVHLQSGSIYGATKGALNQLTRNLACEWARDNIR 185
Query: 192 TNSVAPWYTKTSLVERVM 209
TN VAPWY KTSLVE ++
Sbjct: 186 TNCVAPWYIKTSLVETLL 203
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225449408|ref|XP_002282755.1| PREDICTED: tropinone reductase homolog At1g07440 [Vitis vinifera] gi|296086188|emb|CBI31629.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/209 (71%), Positives = 175/209 (83%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA + SF S WSL+G TALVTGGTRGIG A VEELAGLGA VHTCSRNE EL+KCL+E
Sbjct: 1 MAESNGSFGGSGWSLRGTTALVTGGTRGIGYAVVEELAGLGATVHTCSRNEAELDKCLRE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
W +KGF V+ S+CD + QREKL+++V S FNGKLNILVNNVGT+ RKPT++Y+A EYS
Sbjct: 61 WHAKGFSVTASICDGSDRAQREKLMEKVSSIFNGKLNILVNNVGTSFRKPTVDYTAAEYS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
IMTTN ES YHLCQL +PLLKASG GSIVF+SSV G+ +G+GSIY ATKAA+NQLT+N
Sbjct: 121 TIMTTNLESAYHLCQLAHPLLKASGAGSIVFVSSVAGVVSLGTGSIYAATKAAINQLTKN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
ACEWAKDNIR+NSVAPWY KTSLVE ++
Sbjct: 181 FACEWAKDNIRSNSVAPWYIKTSLVEHLL 209
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15239327|ref|NP_196225.1| tropine dehydrogenase [Arabidopsis thaliana] gi|8978342|dbj|BAA98195.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana] gi|27754526|gb|AAO22710.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gi|28394081|gb|AAO42448.1| putative short chain alcohol dehydrogenase [Arabidopsis thaliana] gi|332003577|gb|AED90960.1| tropine dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/198 (75%), Positives = 170/198 (85%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL G TALVTGGTRGIG+A VEELA GA VHTCSRN+ ELN CL +W++ G VVSGS
Sbjct: 6 RWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGS 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA+ DQREKLIQE S F+GKLNIL+NNVGTN+RKPT+EYS+EEY+KIM+TN ES +
Sbjct: 66 VCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAF 125
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ +PLLKASGVGSIVFISSV GL H+ SGSIYGATK A+NQLTRNLACEWA DNIR
Sbjct: 126 HLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIR 185
Query: 192 TNSVAPWYTKTSLVERVM 209
TN VAPWY KTSLVE ++
Sbjct: 186 TNCVAPWYIKTSLVETLL 203
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 218 | ||||||
| TAIR|locus:2152815 | 264 | AT5G06060 [Arabidopsis thalian | 0.908 | 0.75 | 0.666 | 6.3e-69 | |
| TAIR|locus:2043087 | 322 | AT2G29260 [Arabidopsis thalian | 0.917 | 0.621 | 0.606 | 3.3e-63 | |
| TAIR|locus:2043177 | 269 | SAG13 "senescence-associated g | 0.935 | 0.758 | 0.598 | 1.2e-60 | |
| TAIR|locus:2043037 | 268 | AT2G29150 [Arabidopsis thalian | 0.977 | 0.794 | 0.564 | 3.2e-58 | |
| TAIR|locus:2043167 | 271 | AT2G29360 [Arabidopsis thalian | 0.940 | 0.756 | 0.563 | 5.1e-58 | |
| TAIR|locus:2043052 | 262 | AT2G29290 [Arabidopsis thalian | 0.908 | 0.755 | 0.565 | 1.7e-57 | |
| TAIR|locus:2025072 | 266 | AT1G07440 [Arabidopsis thalian | 0.940 | 0.770 | 0.562 | 3.6e-57 | |
| TAIR|locus:2043152 | 268 | AT2G29370 [Arabidopsis thalian | 0.926 | 0.753 | 0.561 | 4.2e-56 | |
| TAIR|locus:2025057 | 260 | AT1G07450 [Arabidopsis thalian | 0.908 | 0.761 | 0.557 | 2.3e-55 | |
| TAIR|locus:2042992 | 260 | TRI "tropinone reductase" [Ara | 0.894 | 0.75 | 0.564 | 7e-54 |
| TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 132/198 (66%), Positives = 151/198 (76%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL G TALVTGGTRGIG+A VEELA GA VHTCSRN+ ELN CL +W++ G VVSGS
Sbjct: 6 RWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGS 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA+ DQREKLIQE S F+GKLNIL+NNVGTN+RKPT+EYS+EEY+KIM+TN ES +
Sbjct: 66 VCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAF 125
Query: 132 HLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ +PLLKA IYGATK A+NQLTRNLACEWA DNIR
Sbjct: 126 HLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIR 185
Query: 192 TNSVAPWYTKTSLVERVM 209
TN VAPWY KTSLVE ++
Sbjct: 186 TNCVAPWYIKTSLVETLL 203
|
|
| TAIR|locus:2043087 AT2G29260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 122/201 (60%), Positives = 147/201 (73%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL GM+ALVTGGTRGIG+A VEELAGLGA VHTC+RNE EL CL +W GF V+GS
Sbjct: 65 RWSLNGMSALVTGGTRGIGRAIVEELAGLGAEVHTCARNEYELENCLSDWNRSGFRVAGS 124
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD + QRE L++ V S F GKL+ILVNNVGTNIRKP +E++A E+S +M+TNFES +
Sbjct: 125 VCDVSDRSQREALMETVSSVFEGKLHILVNNVGTNIRKPMVEFTAGEFSTLMSTNFESVF 184
Query: 132 HLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNIR 191
HLCQL YPLL+ + +TK A+NQLTR+LACEWAKDNIR
Sbjct: 185 HLCQLAYPLLRESKAGSVVFISSVSGFVSLKNMSVQSSTKGAINQLTRSLACEWAKDNIR 244
Query: 192 TNSVAPWYTKTSLVERVMFSN 212
N+VAPWY KTS+VE+V+ SN
Sbjct: 245 INAVAPWYIKTSMVEQVL-SN 264
|
|
| TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 122/204 (59%), Positives = 145/204 (71%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA ++SRWSL GMTALVTGG++GIG+A VEELA LGA VHTC+R+E +L + L+E
Sbjct: 1 MAKEGGLGENSRWSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLRE 60
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ+KGF V+ SVCD +S DQR KL++ V S + GKLNILVNNVGT+I KPT EY+AE++S
Sbjct: 61 WQAKGFQVTTSVCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFS 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRN 180
+M TN ES +HL QL +PLLKA IYGATK AMNQL RN
Sbjct: 121 FVMATNLESAFHLSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARN 180
Query: 181 LACEWAKDNIRTNSVAPWYTKTSL 204
LACEWA DNIRTNSV PWY T L
Sbjct: 181 LACEWASDNIRTNSVCPWYITTPL 204
|
|
| TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 122/216 (56%), Positives = 150/216 (69%)
Query: 1 MANA-ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59
MA A E+S SRWSL+GMTALVTGG++G+G+A VEELA LGA VHTC+R+E +L + L+
Sbjct: 1 MAKAGENSRDKSRWSLEGMTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLR 60
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
EWQ+KGF V+ SVCD +S +QREKL++ V S F GKLNILVNN GT I KP+ EY+AE+Y
Sbjct: 61 EWQAKGFEVTTSVCDVSSREQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDY 120
Query: 120 SKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTR 179
S +M TN ES +HL Q+ +PLLKA IYGA+K AMNQL R
Sbjct: 121 SFLMATNLESAFHLSQIAHPLLKASGSGSIVFMSSVAGLVHTGAS-IYGASKGAMNQLGR 179
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERVMFSNLSL 215
+LACEWA DNIR NSV PW T L + FS+ L
Sbjct: 180 SLACEWASDNIRVNSVCPWVITTPLTSFI-FSDEKL 214
|
|
| TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 116/206 (56%), Positives = 145/206 (70%)
Query: 1 MANAESSFKSS-RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59
MA S + RWSL GMTALVTGG++GIG+A VEELA LGA +HTC+R+E +L + L+
Sbjct: 1 MAKTGESLRDKPRWSLVGMTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLR 60
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+WQ+KGF V+ SVCD +S D+REKL++ V + F GKLNILVNNVGT I KPT++++AE++
Sbjct: 61 KWQAKGFQVTTSVCDVSSRDKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDF 120
Query: 120 SKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTR 179
S M TN ES +HL QL +PLLKA IYG +K AMNQL R
Sbjct: 121 SFTMATNLESAFHLSQLAHPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGR 180
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLV 205
NLACEWA DNIRTNSV PW+ +T LV
Sbjct: 181 NLACEWASDNIRTNSVCPWFIETPLV 206
|
|
| TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 112/198 (56%), Positives = 140/198 (70%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL+GM ALVTGGT+GIG+A VEEL+ LGA VHTC+R+E +L + L+EWQ KGF V+ S
Sbjct: 4 RWSLQGMNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVTTS 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
+CD + +QREKL++ V S F GKLNILVNNVGT + KPT EY+AEE+S +M TN +S +
Sbjct: 64 ICDVSLREQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAF 123
Query: 132 HLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNIR 191
H+ QL +PLLKA IYGATK AMNQL RNLACEWA DNIR
Sbjct: 124 HISQLAHPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIR 183
Query: 192 TNSVAPWYTKTSLVERVM 209
TN++ PW T L+ ++
Sbjct: 184 TNAICPWLITTPLISDLL 201
|
|
| TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 117/208 (56%), Positives = 140/208 (67%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA AE +S RWSLK T LVTGGT+GIG A VEE AG GAV+HTC+RNE ELN+CL +
Sbjct: 1 MAGAE---QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK 57
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF V+GSVCDA+ +REKL+Q V S F GKL+IL+NN+G KPT++Y+AE++S
Sbjct: 58 WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS 117
Query: 121 KIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRN 180
++TN ES YHL QL +PLLKA IY ATK A+NQL RN
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARN 177
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERV 208
LACEWA D IR N+VAP T L E V
Sbjct: 178 LACEWASDGIRANAVAPAVIATPLAEAV 205
|
|
| TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 114/203 (56%), Positives = 139/203 (68%)
Query: 1 MANAESSFKSS-RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59
MA S + +WSL+GMTALVTGG++G+G+A VEELA LGA VHTC+R+E +L + L+
Sbjct: 1 MAKRGESLRDKPKWSLEGMTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLR 60
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
EWQ+KG V+ SVCD +S DQREKL++ V S F GKL+ILV NVG + KPT E +AEE+
Sbjct: 61 EWQAKGLQVTTSVCDVSSRDQREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEF 120
Query: 120 SKIMTTNFESTYHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTR 179
S I+ TN EST+H QL +PLLKA IYGATK AMNQL R
Sbjct: 121 SFIIATNLESTFHFSQLAHPLLKASGSGNIVLMSSVAGVVNLGNTSIYGATKGAMNQLAR 180
Query: 180 NLACEWAKDNIRTNSVAPWYTKT 202
NLACEWA DNIR NSV PW+ T
Sbjct: 181 NLACEWASDNIRANSVCPWFITT 203
|
|
| TAIR|locus:2025057 AT1G07450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 111/199 (55%), Positives = 136/199 (68%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSG 70
+RWSL+GMTALVTGG++GIG A VEEL G GA VH C +E LN+CL W +KGF VSG
Sbjct: 4 NRWSLQGMTALVTGGSKGIGYAIVEELVGFGARVHICDIDETLLNECLSGWHAKGFEVSG 63
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
S+CD +S QR +L+Q V S F KLNIL+NNVG I KPT+E +AE++S +M TN ES
Sbjct: 64 SICDVSSRPQRVQLMQTVSSLFGAKLNILINNVGKYILKPTLESTAEDFSSLMATNLESA 123
Query: 131 YHLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNI 190
Y++ QL +PLLKA IYG TK A+NQL R+LACEWA DNI
Sbjct: 124 YYISQLAHPLLKASGNGNIVFISSVTGVVSGTST-IYGVTKGALNQLARDLACEWASDNI 182
Query: 191 RTNSVAPWYTKTSLVERVM 209
R NSVAPW T TSLV++ +
Sbjct: 183 RANSVAPWVTATSLVQKYL 201
|
|
| TAIR|locus:2042992 TRI "tropinone reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 110/195 (56%), Positives = 134/195 (68%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSL+G+TALVTGG GIG A VEELAG GA +H C ++ LN+ L EW+ KGF VSGS
Sbjct: 4 RWSLQGLTALVTGGASGIGHAIVEELAGFGAKIHVCDISKTLLNQSLSEWEKKGFQVSGS 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCDA++ +RE L+Q V + F+GKLNILVNNVGT KPTIEY AE++S +++TN ES Y
Sbjct: 64 VCDASNRLERETLMQTVTTIFDGKLNILVNNVGTIRTKPTIEYEAEDFSFLISTNLESAY 123
Query: 132 HLCQLVYPLLKAXXXXXXXXXXXXXXXXXXXXXXIYGATKAAMNQLTRNLACEWAKDNIR 191
HL QL +PLLKA IYG TK A+NQL RNLACEWAKD IR
Sbjct: 124 HLSQLSHPLLKASGNGIITFISSAAGIVSFDAASIYGLTKGALNQLARNLACEWAKDGIR 183
Query: 192 TNSVAPWYTKTSLVE 206
N+VAP + T+L +
Sbjct: 184 ANAVAPNFITTALAK 198
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.921 |
| 4th Layer | 1.1.1.269 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 218 | |||
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 1e-114 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 3e-78 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 1e-60 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-49 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-48 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-45 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 3e-44 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-43 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 3e-43 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 5e-41 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-40 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-40 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 6e-39 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 1e-36 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 7e-36 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 9e-36 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 2e-35 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 4e-35 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 9e-35 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 9e-35 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 1e-34 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 1e-34 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 3e-34 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 3e-34 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 4e-34 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 4e-34 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 2e-33 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 2e-33 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 2e-32 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 5e-32 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 1e-31 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 2e-31 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 2e-31 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 2e-31 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 3e-31 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 4e-31 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 6e-31 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 6e-31 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 8e-31 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 1e-30 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-30 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 2e-30 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 3e-30 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 3e-30 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-30 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 8e-30 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 9e-30 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 2e-29 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 2e-29 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 3e-29 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 5e-29 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 7e-29 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 1e-28 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 1e-28 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 2e-28 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 2e-28 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 3e-28 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 6e-28 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 7e-28 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 8e-28 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 9e-28 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 9e-28 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 1e-27 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 2e-27 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 2e-27 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 3e-27 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 3e-27 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 3e-26 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 3e-26 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 3e-26 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 4e-26 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 4e-26 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 6e-26 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 8e-26 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 1e-25 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 1e-25 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 1e-25 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 1e-25 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 2e-25 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 2e-25 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-25 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 3e-25 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 5e-25 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 9e-25 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 1e-24 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 2e-24 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 2e-24 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 2e-24 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 4e-24 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 5e-24 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 7e-24 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 1e-23 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 1e-23 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 3e-23 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 3e-23 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 4e-23 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 4e-23 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 6e-23 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 7e-23 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 8e-23 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 9e-23 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 1e-22 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 3e-22 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 4e-22 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 4e-22 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 7e-22 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 9e-22 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 1e-21 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 2e-21 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 2e-21 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 2e-21 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 2e-21 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 2e-21 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 2e-21 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 2e-21 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 4e-21 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 5e-21 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 6e-21 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 7e-21 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 8e-21 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 1e-20 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 2e-20 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 2e-20 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 2e-20 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 3e-20 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 4e-20 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 5e-20 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 5e-20 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 5e-20 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 6e-20 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 8e-20 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-19 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 2e-19 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 3e-19 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 3e-19 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 3e-19 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 3e-19 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 5e-19 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 6e-19 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 7e-19 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 1e-18 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 1e-18 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 2e-18 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 3e-18 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 3e-18 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 8e-18 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 2e-17 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 3e-17 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 3e-17 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 3e-17 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 5e-17 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 5e-17 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 8e-17 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 9e-17 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 9e-17 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 1e-16 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 1e-16 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 2e-16 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 3e-16 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 4e-16 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 4e-16 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 4e-16 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 7e-16 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 1e-15 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 2e-15 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 2e-15 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 4e-15 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 4e-15 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 4e-15 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-15 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 5e-15 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 6e-15 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 6e-15 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 6e-15 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 1e-13 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 1e-13 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 1e-13 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 2e-13 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 2e-13 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 2e-13 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 3e-13 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-13 | |
| PRK08017 | 256 | PRK08017, PRK08017, oxidoreductase; Provisional | 3e-13 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 4e-13 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 5e-13 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 5e-13 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 1e-12 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 1e-12 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 1e-12 | |
| PRK07792 | 306 | PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-12 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 2e-12 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 2e-12 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 2e-12 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 4e-12 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 6e-12 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 7e-12 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 8e-12 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 1e-11 | |
| PRK08416 | 260 | PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro | 1e-11 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 1e-11 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 2e-11 | |
| PRK08261 | 450 | PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-11 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 2e-11 | |
| cd05361 | 242 | cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de | 3e-11 | |
| PRK07102 | 243 | PRK07102, PRK07102, short chain dehydrogenase; Pro | 4e-11 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 6e-11 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 1e-10 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 3e-10 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 3e-10 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 4e-10 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 1e-09 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-09 | |
| PRK06483 | 236 | PRK06483, PRK06483, dihydromonapterin reductase; P | 1e-09 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 2e-09 | |
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 4e-09 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 4e-09 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 7e-09 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 8e-09 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 1e-08 | |
| cd05334 | 221 | cd05334, DHPR_SDR_c_like, dihydropteridine reducta | 2e-08 | |
| cd09808 | 255 | cd09808, DHRS-12_like_SDR_c-like, human dehydrogen | 2e-08 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 3e-08 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 3e-08 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 3e-08 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 4e-08 | |
| COG0623 | 259 | COG0623, FabI, Enoyl-[acyl-carrier-protein] | 5e-08 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 6e-08 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 7e-08 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 8e-08 | |
| cd05372 | 250 | cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) | 1e-07 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 1e-07 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 2e-07 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 2e-07 | |
| PRK05717 | 255 | PRK05717, PRK05717, oxidoreductase; Validated | 3e-07 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 3e-07 | |
| PRK07370 | 258 | PRK07370, PRK07370, enoyl-(acyl carrier protein) r | 4e-07 | |
| PRK09009 | 235 | PRK09009, PRK09009, C factor cell-cell signaling p | 6e-07 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 7e-07 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 8e-07 | |
| PRK06953 | 222 | PRK06953, PRK06953, short chain dehydrogenase; Pro | 1e-06 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 2e-06 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 2e-06 | |
| PRK08415 | 274 | PRK08415, PRK08415, enoyl-(acyl carrier protein) r | 3e-06 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 3e-06 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 4e-06 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 7e-06 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 7e-06 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 8e-06 | |
| PRK06101 | 240 | PRK06101, PRK06101, short chain dehydrogenase; Pro | 2e-05 | |
| PRK07023 | 243 | PRK07023, PRK07023, short chain dehydrogenase; Pro | 2e-05 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 3e-05 | |
| PRK07533 | 258 | PRK07533, PRK07533, enoyl-(acyl carrier protein) r | 4e-05 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 4e-05 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 9e-05 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 1e-04 | |
| PRK08303 | 305 | PRK08303, PRK08303, short chain dehydrogenase; Pro | 3e-04 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 4e-04 | |
| PRK08159 | 272 | PRK08159, PRK08159, enoyl-(acyl carrier protein) r | 5e-04 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 6e-04 | |
| PRK07453 | 322 | PRK07453, PRK07453, protochlorophyllide oxidoreduc | 0.002 | |
| TIGR02685 | 267 | TIGR02685, pter_reduc_Leis, pteridine reductase | 0.002 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 324 bits (833), Expect = e-114
Identities = 131/198 (66%), Positives = 159/198 (80%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RW+L+G TALVTGGT+GIG A VEELAGLGA V+TC+RN+ EL++CL EW+ KGF V GS
Sbjct: 1 RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS 60
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD +S +R++L+ V S F GKLNILVNN GTNIRK +Y+ E+YS IM+TNFE+ Y
Sbjct: 61 VCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAY 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL +L +PLLKASG G+IVFISSV G+ V SG+ YGATK A+NQLTR+LACEWAKDNIR
Sbjct: 121 HLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIR 180
Query: 192 TNSVAPWYTKTSLVERVM 209
N+VAPW T LVE V+
Sbjct: 181 VNAVAPWVIATPLVEPVI 198
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 235 bits (600), Expect = 3e-78
Identities = 88/202 (43%), Positives = 118/202 (58%), Gaps = 3/202 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFV 67
RW L G TAL+TG ++GIG A E GLGA V +R+ L + E +
Sbjct: 2 QHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE 61
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
V G D + + R ++ V ++G L+ILVNN G NIRK I+Y+ +E+ I TN
Sbjct: 62 VHGLAADVSDDEDRRAILDWVEDHWDG-LHILVNNAGGNIRKAAIDYTEDEWRGIFETNL 120
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S + L + +PLLK +IV I SV GL+HV SG+ YG TKAA+ Q+TRNLA EWA+
Sbjct: 121 FSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAE 180
Query: 188 DNIRTNSVAPWYTKTSLVERVM 209
D IR N+VAPWY +T L +
Sbjct: 181 DGIRVNAVAPWYIRTPLTSGPL 202
|
Length = 257 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 1e-60
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 2/190 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
ALVTG + GIG+A LA GA V RNE L + L ++ G D + +
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAE-LAAIEALGGNAVAVQADVSDEE 59
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
E L++E +F G+L+ILVNN G P E + E++ +++ N + L + P
Sbjct: 60 DVEALVEEALEEF-GRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY 199
+K G G IV ISSV GL + + Y A+KAA+ LTR+LA E A IR N+VAP
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178
Query: 200 TKTSLVERVM 209
T ++ ++
Sbjct: 179 VDTPMLAKLG 188
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 161 bits (410), Expect = 1e-49
Identities = 65/201 (32%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFV-VSG 70
L G ALVTG + GIG+A LA GA VV E + G +
Sbjct: 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61
Query: 71 SVCD-AASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFE 128
D + + E L+ +F G+++ILVNN G P E + E++ +++ N
Sbjct: 62 VAADVSDDEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLL 120
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ L + PL+K IV ISSV GL + Y A+KAA+ LT+ LA E A
Sbjct: 121 GAFLLTRAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPR 177
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
IR N+VAP Y T + +
Sbjct: 178 GIRVNAVAPGYIDTPMTAALE 198
|
Length = 251 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 156 bits (398), Expect = 8e-48
Identities = 64/186 (34%), Positives = 89/186 (47%), Gaps = 5/186 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL+G TALVTG +RGIG+A LA GA V NE E ++ G V
Sbjct: 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + LI+ F G L+ILVNN G S E++ +++ N T+++
Sbjct: 62 DVSDEAAVRALIEAAVEAF-GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNV 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIR 191
+ P + + G IV ISSV G+ G+ + Y A KA + T+ LA E A I
Sbjct: 121 VRAALPPMIKARYGRIVNISSVSGV--TGNPGQTNYSAAKAGVIGFTKALALELASRGIT 178
Query: 192 TNSVAP 197
N+VAP
Sbjct: 179 VNAVAP 184
|
Length = 246 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 150 bits (381), Expect = 3e-45
Identities = 65/196 (33%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G A+VTG + GIG+ A GA V RNE + E + G D
Sbjct: 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAAD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHL 133
+ E + +F G ++ILVNN GT R P ++ E+ +I N +S Y
Sbjct: 62 VSDEADVEAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLW 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q P ++ G G+IV ++S GL Y A+K A+ LT+ LA E D IR N
Sbjct: 121 TQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVN 180
Query: 194 SVAPWYTKTSLVERVM 209
+VAP +T L+E M
Sbjct: 181 AVAPVVVETGLLEAFM 196
|
Length = 251 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 3e-44
Identities = 62/196 (31%), Positives = 83/196 (42%), Gaps = 2/196 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+G ALVTG RGIG+A LA GA V + + ++ G
Sbjct: 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQV 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + + F G+L+ILV N G P E E++ +++ N T+ L
Sbjct: 63 DVRDRAALKAAVAAGVEDF-GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLL 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRT 192
Q P L +G G IV SSV G G Y A+KA + TR LA E A NI
Sbjct: 122 TQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITV 181
Query: 193 NSVAPWYTKTSLVERV 208
NSV P T + +
Sbjct: 182 NSVHPGGVDTPMAGNL 197
|
Length = 251 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 1e-43
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G A+VTG + GIG+A E LA GA VV NE + L+E + +G
Sbjct: 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D +S + E L++++ KF GK++ILVNN G + + + EE+ +++ N L
Sbjct: 63 DVSSEEDVENLVEQIVEKF-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLL 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P + G IV ISS+ GL +Y A+K A+N T+ LA E A IR N
Sbjct: 122 TRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVN 181
Query: 194 SVAPWYTKTS 203
+VAP T
Sbjct: 182 AVAPGAIDTE 191
|
Length = 247 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 3e-43
Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLKG ALVTG +RGIG LA GA + SRNE + + + + +G + C
Sbjct: 2 SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTC 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + + + ++ + F GK++ILVNN G R P E+ E+ ++ N + +
Sbjct: 62 DVSDEEAIKAAVEAIEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFV 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNIR 191
Q V + G G I+ I S+ LS +G + Y A+K + LT+ LA EWA+ I+
Sbjct: 121 SQAVARHMIKQGHGKIINICSL--LSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQ 178
Query: 192 TNSVAPWYTKTSLVERV 208
N++AP Y T + E V
Sbjct: 179 VNAIAPGYFATEMTEAV 195
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 140 bits (354), Expect = 5e-41
Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G+ LVTGG GIG+A E A GA VH C +E L G V+ +V
Sbjct: 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR--LPGAKVTATVA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYH 132
D A P Q E++ +F G L++LVNN G I+ + E++ + + N ++
Sbjct: 66 DVADPAQVERVFDTAVERF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFY 124
Query: 133 LCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ PLLKASG G I+ +SSV G + Y A+K A+ L ++LA E IR
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184
Query: 192 TNSVAPWYTKTSLVERVM 209
N++ P + + RV+
Sbjct: 185 VNAILPGIVRGPRMRRVI 202
|
Length = 264 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 138 bits (351), Expect = 1e-40
Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 2/196 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
SL+G ALVTG +RGIG+A E LA GA VV + +E + E + G
Sbjct: 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + E+ + E ++F G ++ILVNN G + E++ +++ TN ++
Sbjct: 62 GDVSDAESVERAVDEAKAEF-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + V + G I+ ISSV GL + Y A+KA + T++LA E A I
Sbjct: 121 LTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITV 180
Query: 193 NSVAPWYTKTSLVERV 208
N+VAP + +T + + +
Sbjct: 181 NAVAPGFIETDMTDAL 196
|
Length = 248 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 2e-40
Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
SL G ALVTG RG+G+A LA GA VV +E + ++ ++ G
Sbjct: 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D E + +F G+++ILVNN G KP + S +E+ +++ N +H
Sbjct: 63 ADVTDKAALEAAVAAAVERF-GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFH 121
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + V P ++ G IV ISSV GL S Y A KA + LT+ LA E A+ I
Sbjct: 122 LLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITV 181
Query: 193 NSVAPWYTKTSLVERV 208
N VAP T + E
Sbjct: 182 NMVAPGDIDTDMKEAT 197
|
Length = 249 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 6e-39
Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 18/201 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
SLKG A+VTGG+RGIG A LA GA V + + +E K G
Sbjct: 5 SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD +S + EK +++ F GK++IL+ N G + KP ++Y+ E+++K++ N ++
Sbjct: 65 CDVSSQESVEKTFKQIQKDF-GKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFN 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI---------YGATKAAMNQLTRNLAC 183
Q + K G GS++ +S+ SG+I Y A+KAA+ L ++LA
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASM-------SGTIVNRPQPQAAYNASKAAVIHLAKSLAV 176
Query: 184 EWAKDNIRTNSVAPWYTKTSL 204
EWAK IR NS++P Y T L
Sbjct: 177 EWAKYFIRVNSISPGYIDTDL 197
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 1e-36
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +RGIG+A +LA GA V+ T +E + ++E ++ G G VCD +
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV- 137
+ + +++E+ + G ++ILVNN G + E++ ++ TN ++L Q V
Sbjct: 61 EDVKAVVEEIEEEL-GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
++K G I+ ISSV GL + Y A+KA + T++LA E A NI N+VAP
Sbjct: 120 RIMIKQRS-GRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178
Query: 198 WYTKT 202
+ T
Sbjct: 179 GFIDT 183
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 7e-36
Identities = 60/186 (32%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G ALVT + GIG A LA GA V C+RN L + E ++ G V V D
Sbjct: 1 GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
P+ ++L+++ G F G+++ILVNN G P E + E++ + S + +
Sbjct: 61 DPEDIDRLVEKAGDAF-GRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V P +K G G IV ISS+ + + +A + L + L+ E A D + NSV
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVL 179
Query: 197 PWYTKT 202
P Y T
Sbjct: 180 PGYIDT 185
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 9e-36
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-QSKGFVVSGSV 72
+LKG AL+TG + GIG+AT LA GA V +R E L E ++ V
Sbjct: 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV 62
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D A+ E I+ + +F G+++ILVNN G + P E +++ +++ TN + +
Sbjct: 63 TDRAAV---EAAIEALPEEF-GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLN 118
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V P + G I+ + S+ G G++YGATKAA+ + L E A IR
Sbjct: 119 GTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRV 178
Query: 193 NSVAPWYTKTSLVERVMFSN 212
++P LVE FS
Sbjct: 179 TVISP-----GLVETTEFST 193
|
Length = 246 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 2e-35
Identities = 65/193 (33%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TALVTGG+RG+G E L GA V +R EL + ++ G D
Sbjct: 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A E+L +E +F G ++ILVNN G P ++ E + K+M N + L
Sbjct: 70 VADEADIERLAEETLERF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLS 128
Query: 135 QLVYPL-LKASGVGSIVFISSVGGL--SHVGS-GSI-YGATKAAMNQLTRNLACEWAKDN 189
Q V + G G I+ ++SV GL + +I Y +K A+ TR LA EW
Sbjct: 129 QAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHG 188
Query: 190 IRTNSVAPWYTKT 202
IR N++AP + T
Sbjct: 189 IRVNAIAPGFFPT 201
|
Length = 259 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 4e-35
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
ALVTG RGIG V +LA G V +R+ +++ +++G V D
Sbjct: 2 VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYHLCQL 136
E V K+ G L+ILVNN G + + E+ + M TNF T + Q
Sbjct: 62 DASIEAAADFVEEKY-GGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQA 120
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
+ PLLK S G IV +SS GL + S YG +KAA+N LTR LA E + I+ N+
Sbjct: 121 LLPLLKKSPAGRIVNVSS--GLGSLTSA--YGVSKAALNALTRILAKELKETGIKVNACC 176
Query: 197 PWYTKTSL 204
P + KT +
Sbjct: 177 PGWVKTDM 184
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 9e-35
Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 5/195 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG ALVTG GIG LA GA V N+ + Q G G D
Sbjct: 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ I F G ++ILVNN G P ++ E++ K++ + +
Sbjct: 62 VTDEEAINAGIDYAVETF-GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTT 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P++KA G G I+ ++SV G VGS + Y + K + LT+ +A E A +
Sbjct: 121 KAALPIMKAQGGGRIINMASVHG--LVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTV 178
Query: 193 NSVAPWYTKTSLVER 207
N++ P Y T LV +
Sbjct: 179 NAICPGYVDTPLVRK 193
|
Length = 258 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 9e-35
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 2/194 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVC 73
+KG TAL+TG + GIG ++LA G + +R E +L KE + K V V
Sbjct: 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + P+ E+L E+ + G +++LVNN G P +E S +E +++ N + L
Sbjct: 64 DLSDPEALERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V P + G G I+ I S GL ++Y ATKA + + L E ++
Sbjct: 123 TKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVT 182
Query: 194 SVAPWYTKTSLVER 207
+V P T+T +
Sbjct: 183 AVCPGPTRTEFFDA 196
|
Length = 265 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-34
Identities = 73/199 (36%), Positives = 106/199 (53%), Gaps = 8/199 (4%)
Query: 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG 65
F +SL G A+VTGG G+GQ LA GA ++ T + + L E +G
Sbjct: 5 KFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIE--KEG 62
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125
V+ D P+ EK+++E +F GK++ILVNN GT R P +EY E+++ +M
Sbjct: 63 RKVTFVQVDLTKPESAEKVVKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDI 121
Query: 126 NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLAC 183
N S YHL Q V ++ G G I+ I+S+ LS G + Y A+K + LT+ A
Sbjct: 122 NLNSVYHLSQAVAKVMAKQGSGKIINIASM--LSFQGGKFVPAYTASKHGVAGLTKAFAN 179
Query: 184 EWAKDNIRTNSVAPWYTKT 202
E A NI+ N++AP Y KT
Sbjct: 180 ELAAYNIQVNAIAPGYIKT 198
|
Length = 258 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 1e-34
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 8/171 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDA 75
T L+TGGT G+G A LA GA + SR + + E ++ G V+ + CD
Sbjct: 2 TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
A D L+ + + G L+ +V+N G P E + E + +++ ++L +
Sbjct: 62 ADRDALAALLAALPAAL-GPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
L L +G+ V SSV G+ + Y A AA++ L + E
Sbjct: 121 LTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 3e-34
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
L+TG + GIG A LA G V +RN +L + V+ D
Sbjct: 2 VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLE---LDVTDE 58
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ + ++EV +F G++++LVNN G + P E S EE ++ N + +
Sbjct: 59 ESIKAAVKEVIERF-GRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFL 117
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
PL++ G G IV +SSV GL Y A+KAA+ L+ +L E A I+ + P
Sbjct: 118 PLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEPG 177
Query: 199 YTKTSLVERVMFSNL 213
+T + S L
Sbjct: 178 PVRTGFADNAAGSAL 192
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 3e-34
Identities = 63/186 (33%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTG GIG+AT + LA GA V +E E + G C
Sbjct: 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRAL-GVAC 477
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + +E F G ++I+V+N G I P E S E++ + N + +
Sbjct: 478 DVTDEAAVQAAFEEAALAFGG-VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLV 536
Query: 134 CQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIR 191
+ ++KA G+G SIVFI+S + + G YGA KAA L R LA E D IR
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAV-NPGPNFGAYGAAKAAELHLVRQLALELGPDGIR 595
Query: 192 TNSVAP 197
N V P
Sbjct: 596 VNGVNP 601
|
Length = 681 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 4e-34
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
LKG A+VTGG RG+G A L GA V + E E
Sbjct: 2 RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFH---L 58
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D D ++ F G+L++LVNN G + EE+ +++ N +
Sbjct: 59 DVTDEDGWTAVVDTAREAF-GRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLG 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK--DNIR 191
+ V P +K +G GSI+ +SS+ GL + + Y A+K A+ LT++ A E A IR
Sbjct: 118 TRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIR 177
Query: 192 TNSVAPWYTKTSLVE 206
NSV P Y T + +
Sbjct: 178 VNSVHPGYIYTPMTD 192
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 4e-34
Identities = 60/194 (30%), Positives = 98/194 (50%), Gaps = 9/194 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +RGIG+A LA GA V R+E + ++E ++ G + D +
Sbjct: 2 VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ E L+++V ++F G ++ILVNN G + S E++ ++ N +++ Q V
Sbjct: 62 EAVEALVEKVEAEF-GPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAVI 120
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ G I+ ISSV GL G+ Y A+KA + T++LA E A I N+
Sbjct: 121 RAMIKRRSGRIINISSVVGL----IGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176
Query: 195 VAPWYTKTSLVERV 208
VAP + T + + +
Sbjct: 177 VAPGFIDTDMTDAL 190
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 2e-33
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 5/198 (2%)
Query: 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV 67
+ +SLKG AL+TG + GIG A + A GA + N+ ++K L ++ G
Sbjct: 1 MSENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIE 60
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
G VCD D + ++ ++ + G ++ILVNN G R P +E SAE++ +++ +
Sbjct: 61 AHGYVCDVTDEDGVQAMVSQIEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDL 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEW 185
+ + + + V P + G G I+ I S+ +S +G + S Y A K + LT+N+A E+
Sbjct: 120 NAPFIVSKAVIPSMIKKGHGKIINICSM--MSELGRETVSAYAAAKGGLKMLTKNIASEY 177
Query: 186 AKDNIRTNSVAPWYTKTS 203
+ NI+ N + P Y T
Sbjct: 178 GEANIQCNGIGPGYIATP 195
|
Length = 265 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 120 bits (302), Expect = 2e-33
Identities = 60/198 (30%), Positives = 86/198 (43%), Gaps = 7/198 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L G ALVTG RG+G A E LA GA V E + ++ G
Sbjct: 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A P ++ + G L+ LVNN G K E + + +M N T+ +
Sbjct: 64 DLADPASVQRFFDAAAAAL-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLM 122
Query: 134 CQLVYPLLKASGVGSIVFISS--VG-GLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ P L+ SG G IV ++S G +G+ Y A+K A+ +TR+LA E I
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALWGAPKLGA---YVASKGAVIGMTRSLARELGGRGI 179
Query: 191 RTNSVAPWYTKTSLVERV 208
N++AP T T V
Sbjct: 180 TVNAIAPGLTATEATAYV 197
|
Length = 250 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 2e-32
Identities = 66/188 (35%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK----CLKEWQSKGFVVSG 70
L G A++TG + GIG T A LGA + R+ L + CL+ S+ ++
Sbjct: 1 LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILL- 59
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
V D + ++++I +KF G+L+ILVNN G + + EEY K+M N +
Sbjct: 60 VVADLTEEEGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAV 118
Query: 131 YHLCQLVYPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+L +L P L + G IV +SSV GG S G Y +KAA++Q TR A E A
Sbjct: 119 IYLTKLAVPHLIKTK-GEIVNVSSVAGGRSFPGVLY-YCISKAALDQFTRCTALELAPKG 176
Query: 190 IRTNSVAP 197
+R NSV+P
Sbjct: 177 VRVNSVSP 184
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 116 bits (292), Expect = 5e-32
Identities = 60/191 (31%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVC 73
LKG A +TGG GIG+A + A LGA V R L +E S C
Sbjct: 1 LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D P+ E + E +F GK++IL+NN N P S + ++ + T++
Sbjct: 61 DVRDPEAVEAAVDETLKEF-GKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNT 119
Query: 134 CQLVYP-LLKASGVGSIVFISS------VGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
+ V L++A GSI+ IS+ H A KA ++ LTR+LA EW
Sbjct: 120 TKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSA------AAKAGVDALTRSLAVEWG 173
Query: 187 KDNIRTNSVAP 197
IR N++AP
Sbjct: 174 PYGIRVNAIAP 184
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 1e-31
Identities = 64/194 (32%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV--ELNKCLKEWQSKGFVVSG 70
L G ALVTG +RGIG+A + LA GA VV+ S E+ ++ K V
Sbjct: 1 LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQA 60
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D + P Q +L F G ++ILVNN G ++KP E S EE+ ++ T N +
Sbjct: 61 ---DVSDPSQVARLFDAAEKAF-GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGA 116
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ + Q L+ G I+ ISS ++ + Y +KAA+ TR LA E I
Sbjct: 117 FFVLQEAAKRLRDGG--RIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGI 174
Query: 191 RTNSVAPWYTKTSL 204
N+VAP T +
Sbjct: 175 TVNAVAPGPVDTDM 188
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-31
Identities = 69/193 (35%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
R L ALVT T GIG A LA GA V SR + +++ + Q +G V+G+
Sbjct: 5 RDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGT 64
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE-YSKIMTTNFEST 130
VC + RE+L+ +G ++ILV+N N I S EE + KI+ N ++T
Sbjct: 65 VCHVGKAEDRERLV-ATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKAT 123
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ + V P ++ G GS+V +SSV Y +K A+ LT+NLA E A NI
Sbjct: 124 ALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNI 183
Query: 191 RTNSVAPWYTKTS 203
R N +AP KTS
Sbjct: 184 RVNCLAPGLIKTS 196
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 114 bits (289), Expect = 2e-31
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL----NKCLKEWQSKGFVVSG 70
L+G ++TG + GIG+ LA LGA + +R E L ++CL+ VV
Sbjct: 1 LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D + + E++++E F G L+IL+NN G ++R + S + KIM N+
Sbjct: 61 ---DMSDLEDAEQVVEEALKLF-GGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGP 116
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
L + P L GSIV +SS+ G V + Y A+K A+ +L E ++ NI
Sbjct: 117 VALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNI 176
Query: 191 RTNSVAPWYTKTSLVER 207
V P T++
Sbjct: 177 SVTVVCPGLIDTNIAMN 193
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 2e-31
Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 14/206 (6%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHT----CSRNEVELNKCLKEWQSKGFVV 68
SL L+TGG+ G+G+A LA GA V R E + ++ G
Sbjct: 2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKA 61
Query: 69 SGSVCD----AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT 124
G D AA+ + ++E G+L+ILVNN G E S EE+ ++
Sbjct: 62 LGLAFDVRDFAATRAALDAGVEE-----FGRLDILVNNAGIATDAAFAELSIEEWDDVID 116
Query: 125 TNFESTYHLCQ-LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
N + +++ Q + P+++A G IV I+SV G+ Y A+KA + LT+ LA
Sbjct: 117 VNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLAN 176
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERVM 209
E A I N+VAP T + +
Sbjct: 177 ELAPRGITVNAVAPGAINTPMADNAA 202
|
Length = 249 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 3e-31
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 3/195 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
R+SL G ALVTG RG+G LAG GA V RN L + ++ G
Sbjct: 4 LQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAE 63
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D A + + +G+L+ILVNNVG R+P E ++ T+ +
Sbjct: 64 ALAFDIADEEAVAAAFARID-AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVA 122
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
L +L +K G G I+ I+S+ G ++ G ++Y A K + L R LA E+
Sbjct: 123 PILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGD-AVYPAAKQGLTGLMRALAAEFGPH 181
Query: 189 NIRTNSVAPWYTKTS 203
I +N++AP Y T
Sbjct: 182 GITSNAIAPGYFATE 196
|
Length = 256 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 4e-31
Identities = 67/193 (34%), Positives = 89/193 (46%), Gaps = 5/193 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G TALVTG GIG A LA GA V E K G V D
Sbjct: 1 GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
D+ +I ++F G L+ILVNN G P E+ E++ +I+ S +H +
Sbjct: 61 KEDEIADMIAAAAAEF-GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
P +K G G I+ I+S GL V S S Y A K + LT+ LA E A+ I N+
Sbjct: 120 ALPHMKKQGWGRIINIASAHGL--VASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNA 177
Query: 195 VAPWYTKTSLVER 207
+ P Y +T LVE+
Sbjct: 178 ICPGYVRTPLVEK 190
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 6e-31
Identities = 61/182 (33%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDA 75
ALVTGG+RGIG+A LA GA VV +++ + E + G VV V
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADV--- 57
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ P E++ V +F G+L++LV+N +P E + + M TN ++ H Q
Sbjct: 58 SQPQDVEEMFAAVKERF-GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQ 116
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L++ G G IV ISS+G + + + G KAA+ L R LA E IR N+V
Sbjct: 117 QAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAV 176
Query: 196 AP 197
+P
Sbjct: 177 SP 178
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 6e-31
Identities = 63/190 (33%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV- 72
L G LVTGGTRGIG GA V C R E V G
Sbjct: 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------------TVDGRPA 49
Query: 73 ----CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
D PDQ L+ + + G+L++LVNN G + E S + KI+ N
Sbjct: 50 EFHAADVRDPDQVAALVDAIVERH-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLL 108
Query: 129 STYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ + Q +++ G GSIV I SV G + YGA KA + LTR+LA EWA
Sbjct: 109 APLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP 168
Query: 188 DNIRTNSVAP 197
+R N+V
Sbjct: 169 K-VRVNAVVV 177
|
Length = 252 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 8e-31
Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G ALVTGG GIG A + LA GA V + K + Q + G CD
Sbjct: 1 GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRAL-GVQCDVT 59
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
S Q + ++ +F G L+I+V+N G P E S E++++ M N + + +
Sbjct: 60 SEAQVQSAFEQAVLEFGG-LDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSRE 118
Query: 137 VYPLLKASGVG-SIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ ++K+ G+G +IVF +S + G + Y A KAA L R LA E +D IR N+
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAV-APGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNT 177
Query: 195 VAP 197
V P
Sbjct: 178 VNP 180
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-30
Identities = 56/192 (29%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G + LVTG + GIG+A LA GA V +RN L++ E + + V D A
Sbjct: 9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLD--VGDDA 66
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ G + LVN G + ++ +AE + ++M N + +
Sbjct: 67 A--------IRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARH 118
Query: 137 VYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
V ++ A GSIV +SS L + Y A+KAA++ +TR L E IR NSV
Sbjct: 119 VARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSV 178
Query: 196 APWYTKTSLVER 207
P T T +
Sbjct: 179 NPTVTLTPMAAE 190
|
Length = 245 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 1e-30
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL+G AL+TG RGIG+A LA G V +R E L +E ++ G V +
Sbjct: 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + ++ I+++ ++ G ++IL+NN G + +E E+ KI+ N Y+
Sbjct: 64 DVSDYEEVTAAIEQLKNEL-GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYA 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V P + G I+ ISS G S Y A+K + LT +L E K NIR
Sbjct: 123 TRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVT 182
Query: 194 SVAPWYTKTSLV----------ERVM 209
++ P T + ++VM
Sbjct: 183 ALTPSTVATDMAVDLGLTDGNPDKVM 208
|
Length = 239 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 2e-30
Identities = 63/184 (34%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
A+VTGG GIG+A LA GA V Q G G C+ S
Sbjct: 2 AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKP-TIEYSAEEYSKIMTTNFESTYHLCQLVY 138
E +++ S+F G + ILVNN G KP + + E++ N S + L QL
Sbjct: 62 DLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++ +G G+I+ ISS+ + + YG++KAA+N +TRNLA + IR N+VAP
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG 180
Query: 199 YTKT 202
KT
Sbjct: 181 AVKT 184
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-30
Identities = 57/185 (30%), Positives = 90/185 (48%), Gaps = 5/185 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL----NKCLKEWQSKGFVVSGSV 72
G L+TGG+ GIG+A +EL GA V +R+E +L + E + G VS
Sbjct: 1 GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + ++ E+ + K G +++VN G +I + +AEE+ + M N+ + +
Sbjct: 61 ADLSDYEEVEQAFAQAVEKG-GPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLN 119
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V PL+K G IVF+SS L + S Y +K A+ L +L E NIR
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV 179
Query: 193 NSVAP 197
+ V P
Sbjct: 180 SVVYP 184
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-30
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV 67
F S L G A++TG GIG+ A GA V N N + E Q G
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
CD S + L SK GK++ILVNN G KP + ++ + N
Sbjct: 62 AFACRCDITSEQELSALADFALSKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNV 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S +HL QLV P ++ +G G I+ I+S+ + + + Y ++KAA + L RN+A + +
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 188 DNIRTNSVAPWYTKTSLVERVM 209
NIR N +AP T ++ V+
Sbjct: 180 KNIRVNGIAPGAILTDALKSVI 201
|
Length = 255 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 5e-30
Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
KG AL+TGGTRGIG+A E GA V + K L+E KG CD
Sbjct: 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE---KGVFTIK--CD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ DQ +K + V +F G++++LVNN G P E+ E+Y+K++ N +
Sbjct: 60 VGNRDQVKKSKEVVEKEF-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTT 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNIRTN 193
PLLK S G+IV I+S G+ G + Y TKA + LTR LA E K IR N
Sbjct: 119 YEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVN 178
Query: 194 SVAPWYTKTSL 204
+VAP + +T +
Sbjct: 179 AVAPGWVETDM 189
|
Length = 255 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 8e-30
Identities = 66/200 (33%), Positives = 97/200 (48%), Gaps = 5/200 (2%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
R+ L A+VTG RG+G A A GA V +R E +L++ ++ ++ G
Sbjct: 5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVV 64
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D A P+ L + F G+L+I+VNNVG + P + S ++ + T N + +
Sbjct: 65 AADLAHPEATAGLAGQAVEAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAH 123
Query: 132 HLCQLVYPL-LKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDN 189
L PL L+ SG GS++ ISS G G G YG KAA+ TR A +
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMG-RLAGRGFAAYGTAKAALAHYTRLAALDLCP-R 181
Query: 190 IRTNSVAPWYTKTSLVERVM 209
IR N++AP TS +E V
Sbjct: 182 IRVNAIAPGSILTSALEVVA 201
|
Length = 263 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 9e-30
Identities = 62/193 (32%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L+G +VTGG+ GIG A V+EL GA V + + + ++ FV
Sbjct: 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG-----QHENYQFV----PT 56
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK---------PTIEYSAEEYSKIMT 124
D +S ++ + E+ KF G+++ LVNN G NI + E + + K+
Sbjct: 57 DVSSAEEVNHTVAEIIEKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFN 115
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N + + + Q V + G IV +SS GL S Y ATKAA+N TR+ A E
Sbjct: 116 INQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKE 175
Query: 185 WAKDNIRTNSVAP 197
K NIR VAP
Sbjct: 176 LGKHNIRVVGVAP 188
|
Length = 266 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-29
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 3/184 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLKG AL+TGG++GIG A E L G V +R++ EL + E +KG V+ G
Sbjct: 3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVL-GLAA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D ++ + + + F G L++L+ N G P E + EE+ ++ TN ++
Sbjct: 62 DVRDEADVQRAVDAIVAAF-GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYT 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P LK G G I+ ISS+ G + G+ Y A+K + + + + I+ +
Sbjct: 121 IKAAVPALKRGG-GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179
Query: 194 SVAP 197
++ P
Sbjct: 180 TIMP 183
|
Length = 237 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 2e-29
Identities = 65/198 (32%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQS-KGF------VVSG 70
ALVTG RGIG A EL G V+ T N C K+W GF +
Sbjct: 4 IALVTGAKRGIGSAIARELLNDGYRVIATYFSG----NDCAKDWFEEYGFTEDQVRLKEL 59
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
V D + I+E G ++ILVNN G S +E++ ++ TN S
Sbjct: 60 DVTDTEECAEALAEIEEE----EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSV 115
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+++ Q ++ + G G I+ ISSV GL + Y A KA M T+ LA E A+ I
Sbjct: 116 FNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGI 175
Query: 191 RTNSVAPWYTKTSLVERV 208
N +AP Y T +VE++
Sbjct: 176 TVNCIAPGYIATPMVEQM 193
|
Length = 245 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 3e-29
Identities = 59/193 (30%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ LVTG GIG+A + A G V RN + + + S G D
Sbjct: 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRN---VERARERADSLGPDHHALAMDV 60
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHL 133
+ Q + +++ +F G++++LVNN G T++ + EE++++ N Y +
Sbjct: 61 SDEAQIREGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLV 119
Query: 134 CQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ L+ G G +IV ++S GL + + Y A+KAA+ LTR+LACEWA IR
Sbjct: 120 AREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRV 179
Query: 193 NSVAPWYTKTSLV 205
N+V P Y +T +V
Sbjct: 180 NAVLPGYVRTQMV 192
|
Length = 520 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 5e-29
Identities = 61/190 (32%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+S+ G LVTGG+RGIG+ + GA V +R +E + G ++
Sbjct: 2 FSVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIP- 60
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D +S + E L+ V + + +L++LVNN G P + + K+M N +S +
Sbjct: 61 ADLSSEEGIEALVARVAER-SDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFF 119
Query: 133 LCQLVYPLLKASGV----GSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAK 187
L Q + PLL+A+ ++ I S+ G+ G + YGA+KAA++QLTR LA E A
Sbjct: 120 LTQALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAG 179
Query: 188 DNIRTNSVAP 197
++I N++AP
Sbjct: 180 EHITVNAIAP 189
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 7e-29
Identities = 67/200 (33%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC---LKEWQSKGFVVSGS 71
G ALVTGG GIG+AT A GA V R+ + ++E + V+
Sbjct: 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVA-- 62
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT-IEYSAEEYSKIMTTNFEST 130
CD + + L+++ + + G+L+ NN G I + E S E+ IM N +
Sbjct: 63 -CDVTRDAEVKALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGV 120
Query: 131 YHLC---QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ LC Q+ PL+ A G G+IV +SV GL SIY A+K A+ LT++ A E+AK
Sbjct: 121 W-LCMKYQI--PLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAK 177
Query: 188 DNIRTNSVAPWYTKTSLVER 207
IR N+V P T + R
Sbjct: 178 KGIRVNAVCPAVIDTDMFRR 197
|
Length = 253 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 1e-28
Identities = 58/203 (28%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKG---FVVSGSVCDA 75
A++TGG GIG AT + L GA V RNE L+ K FV CD
Sbjct: 3 AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFV----QCDV 58
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS--KIMTTNFESTYHL 133
S +Q ++ KF G+++IL+NN G K + K + N +
Sbjct: 59 TSWEQLAAAFKKAIEKF-GRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINT 117
Query: 134 CQLVYPLLKAS---GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW-AKDN 189
L + + G IV I SV GL +Y A+K + TR+LA K
Sbjct: 118 TYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTG 177
Query: 190 IRTNSVAPWYTKTSLVERVMFSN 212
+R N++ P +T T L+ ++
Sbjct: 178 VRVNAICPGFTNTPLLPDLVAKE 200
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 1e-28
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 25/211 (11%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-----QSKGFVVSGS 71
G ++TG GIG+ T ELA GA V RNE K + ++ V
Sbjct: 1 GKVVVITGANSGIGKETARELAKRGAHVIIACRNE---EKGEEAAAEIKKETGNAKVEVI 57
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D +S + +E ++F +L+IL+NN G P + + + N+ +
Sbjct: 58 QLDLSSLASVRQFAEEFLARFP-RLDILINNAGIMA--PPRRLTKDGFELQFAVNYLGHF 114
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGG---------LSHVGSGS-----IYGATKAAMNQL 177
L L+ P+LKAS IV +SS+ L + YG +K A
Sbjct: 115 LLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILF 174
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208
TR LA + N++ P +T L+ R
Sbjct: 175 TRELARRLEGTGVTVNALHPGVVRTELLRRN 205
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 2e-28
Identities = 55/194 (28%), Positives = 81/194 (41%), Gaps = 3/194 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSV 72
L G ALVTG +GIG A A GA V + + G V
Sbjct: 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + F G L++LVNN G N+ + + E++ + + + ++
Sbjct: 65 ADVTDAASVAAAVAAAEEAF-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWN 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
C+ V P + G GSIV I+S + Y K + LTR L E+A N+R
Sbjct: 124 GCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRV 183
Query: 193 NSVAPWYTKTSLVE 206
N++AP Y +T L E
Sbjct: 184 NAIAPGYIETQLTE 197
|
Length = 260 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 2e-28
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G T L+TGGT GIG A + G V R E L E + + + V
Sbjct: 2 KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERL----AEAKKELPNIHTIVL 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGT----NIRKPTIEYSAEEYSKIMTTNFES 129
D + E L + + S++ L+IL+NN G ++R P + ++ + TN
Sbjct: 58 DVGDAESVEALAEALLSEYP-NLDILINNAGIQRPIDLRDPASD--LDKADTEIDTNLIG 114
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
L + P LK +IV +SS + + +Y ATKAA++ T L +
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174
Query: 190 IRTNSVAPWYTKTSL 204
+ + P T L
Sbjct: 175 VEVVEIVPPAVDTEL 189
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 3e-28
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L G TA+VTG GIG+ ELA GA V N+ N E G G
Sbjct: 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAM 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + D I +V +F G ++ILV+N G I P YS ++ K+ + + +
Sbjct: 64 DVTNEDAVNAGIDKVAERF-GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLT 122
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNI 190
+ + K G ++++ SV SH S S Y K + L R LA E AK N+
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVH--SHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNV 180
Query: 191 RTNSVAPWYTKTSLVER 207
R++ V P + +T LV++
Sbjct: 181 RSHVVCPGFVRTPLVDK 197
|
Length = 262 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 6e-28
Identities = 62/195 (31%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE----LNKCL--------KEWQ 62
L G A VTG +RGIG+A LA GA V ++ E K L +E +
Sbjct: 1 LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
+ G V D DQ L++ +F G+L+ILVNN G + A+ + +
Sbjct: 61 AAGGQALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLSLVEDTPAKRFDLM 119
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
N TY L Q P + +G G I+ IS L Y A KA M++LT LA
Sbjct: 120 QRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLA 179
Query: 183 CEWAKDNIRTNSVAP 197
E + I NS+ P
Sbjct: 180 AELRRHGIAVNSLWP 194
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 7e-28
Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 5/194 (2%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+ L G ALVTG ++GIG A E LA GA V R+ +L + + +G
Sbjct: 6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D D I ++ G ++ILVNN G R P ++ A+ + +++ TN S ++
Sbjct: 66 FDVTDHDAVRAAIDAFEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFY 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNI 190
+ Q V + A G G I+ I+SV S + I Y ATK A+ LT+ +A +WAK +
Sbjct: 125 VGQAVARHMIARGAGKIINIASVQ--SALARPGIAPYTATKGAVGNLTKGMATDWAKHGL 182
Query: 191 RTNSVAPWYTKTSL 204
+ N++AP Y T L
Sbjct: 183 QCNAIAPGYFDTPL 196
|
Length = 255 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 8e-28
Identities = 66/195 (33%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSV 72
LK +VTGG GIG A LA GA+ R+ E + L+ Q + V +
Sbjct: 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDL 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D Q +++ +KF G+++ LVNN G N +E E + + N Y
Sbjct: 65 TD---DAQCRDAVEQTVAKF-GRIDGLVNNAGVNDGV-GLEAGREAFVASLERNLIHYYV 119
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P LKAS G+IV ISS L+ G S Y A K A LTR A AKD +R
Sbjct: 120 MAHYCLPHLKASR-GAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRV 178
Query: 193 NSVAPWYTKTSLVER 207
N+V P T L E
Sbjct: 179 NAVIPAEVMTPLYEN 193
|
Length = 258 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 9e-28
Identities = 63/195 (32%), Positives = 96/195 (49%), Gaps = 12/195 (6%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+SL+G ALVTG G+GQ LA GA + R E ++ ++ ++ G
Sbjct: 1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGR--SEPSETQQQVEALGRRFLSLT 58
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + + L+ +F G ++ILVNN G R E+S +++ +M N +S +
Sbjct: 59 ADLSDIEAIKALVDSAVEEF-GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFF 117
Query: 133 LCQLV-YPLLKASGVGSIVFISSV----GGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
L Q LK G I+ I+S+ GG+ V S Y A+K A+ LT+ LA EWA
Sbjct: 118 LTQAAAKHFLKQGRGGKIINIASMLSFQGGI-RVPS---YTASKHAVAGLTKLLANEWAA 173
Query: 188 DNIRTNSVAPWYTKT 202
I N++AP Y T
Sbjct: 174 KGINVNAIAPGYMAT 188
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 105 bits (264), Expect = 9e-28
Identities = 59/195 (30%), Positives = 102/195 (52%), Gaps = 4/195 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+ A++TG + GIGQA+ LA GA V E +++ + + +S G D
Sbjct: 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAE-AVSETVDKIKSNGGKAKAYHVD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYHL 133
+ Q + E+ +F G++++L NN G + I EY + + KIM + T+ +
Sbjct: 63 ISDEQQVKDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLM 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+++ PL+ G GSI+ SS G + S Y A K A+ T+++A E+ +D IR N
Sbjct: 122 TKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180
Query: 194 SVAPWYTKTSLVERV 208
++AP +T LV+++
Sbjct: 181 AIAPGTIETPLVDKL 195
|
Length = 272 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 1e-27
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A+VTG GIG+AT + A GA V R+ + + G D
Sbjct: 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S + E L+ V +++ G+L++LVNN G + ++ +M N +
Sbjct: 62 VGSAEAVEALVDFVAARW-GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWA 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P+++ G GSIV +S L+ + Y A+K A+ LTR +A + A D IR N+
Sbjct: 121 KYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNA 180
Query: 195 VAP 197
VAP
Sbjct: 181 VAP 183
|
Length = 252 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-27
Identities = 61/203 (30%), Positives = 94/203 (46%), Gaps = 9/203 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTG +RGIG+ +L GA V+ R +L +E +++G C
Sbjct: 1 LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNV-------GTNIRKPTIEYSAEEYSKIMTTN 126
D + D+ E L + V + G+L+ILVNN + KP E + I
Sbjct: 61 DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
+ Y PL+ +G G IV ISS GGL ++ YG KAA++++ ++A E
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYL-FNVAYGVGKAAIDRMAADMAHELK 179
Query: 187 KDNIRTNSVAPWYTKTSLVERVM 209
+ S+ P + +T LV +
Sbjct: 180 PHGVAVVSLWPGFVRTELVLEMP 202
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 2e-27
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG T GIG A L G V C+R E L +KE + G G CD S
Sbjct: 5 VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ E L+ +++ G +++LVNN G + T E + E + ++ TN + + + V
Sbjct: 65 PEIEALVAAAVARY-GPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVL 123
Query: 139 PL--LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
+ G G I+ I+S GG V + Y A+K + T+ L E A+ I N+V
Sbjct: 124 KAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 183
Query: 197 PWYTKTSLVERV 208
P + +T + V
Sbjct: 184 PGFVETPMAASV 195
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 3e-27
Identities = 62/185 (33%), Positives = 96/185 (51%), Gaps = 10/185 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G ALVTG +GIG+ATV+ LA GA V SR + +L+ ++E +
Sbjct: 4 DFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPG----IEPVCV 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + D E+ + VG +++LVNN I +P +E + E + + N + H+
Sbjct: 60 DLSDWDATEEALGSVGP-----VDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHV 114
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q+V + A GV GSIV +SS + + ++Y +TKAA++ LT+ +A E IR
Sbjct: 115 SQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRV 174
Query: 193 NSVAP 197
NSV P
Sbjct: 175 NSVNP 179
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 3e-27
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
ALVTG +RGIG+AT L G V C+R+E L + V G D
Sbjct: 3 ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG---VLGLAGDVRDEA 59
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
+ + + F G L+ LVNN G + KP E + EE+ ++ TN ++ P
Sbjct: 60 DVRRAVDAMEEAFGG-LDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
L G G+IV + S+ G + G+ Y A+K + L+ + + NIR +V P
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMP 176
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 3e-26
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TAL+TG +GIG+ A GA + + E+ K E +G + V D
Sbjct: 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVAD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
P I+ K G+++ILVNN G ++ S E+ + N + +++
Sbjct: 63 VRDPASVAAAIKRAKEKE-GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVT 121
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V P + A G IV +SSV G G Y TKAA+ LT++LA E+A+ IR N
Sbjct: 122 KAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVN 181
Query: 194 SVAPWYTKTSLVERV 208
++ P Y +T + E +
Sbjct: 182 AICPGYVRTPMAESI 196
|
Length = 263 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 3e-26
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN---KCLKEWQSKGFVVSGSVCDAAS 77
L+TGG G+G AT LA GA + NE L L E V+ D +
Sbjct: 7 LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLL-IKADVSD 65
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYHLCQL 136
Q E + +F G+++ NN G ++ T ++ A+E+ K+++ N ++ +
Sbjct: 66 EAQVEAYVDATVEQF-GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEK 124
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V +++ G G IV +SVGG+ VG+ S Y A K + LTRN A E+ + IR N++A
Sbjct: 125 VLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIA 184
Query: 197 PWYTKTSLVERVM 209
P T +VE +
Sbjct: 185 PGAILTPMVEGSL 197
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 3e-26
Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGS 71
L G A+VTGG GIG A E A GA V R+E E+ L +KG V
Sbjct: 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLV---- 67
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
CD + E + V S F G+++ILVN+ G + P + S E++ K + N + ++
Sbjct: 68 -CDVSDSQSVEAAVAAVISAF-GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSF 125
Query: 132 HLCQLVYPLLKASGVGSIVFISS----VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ Q V + A+G G IV ++S V HV Y A+KA + +T+ LA EW
Sbjct: 126 LMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVA----YCASKAGVVGMTKVLALEWGP 181
Query: 188 DNIRTNSVAPWYTKTSL 204
I N+++P T L
Sbjct: 182 YGITVNAISPTVVLTEL 198
|
Length = 255 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 4e-26
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +RGIG LA G V RN +L L V DA P
Sbjct: 2 VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDL-AALSASGGDVEAVP---YDARDP 57
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ L+ + +F G++++LV+N G E S E + N + L + +
Sbjct: 58 EDARALVDALRDRF-GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P L+ +G G +VF++S+ G + + Y A+K A+ L L E +R ++V P
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176
Query: 199 YTKTSLVERVM 209
+ T + + +
Sbjct: 177 FVDTPMAQGLT 187
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 4e-26
Identities = 68/199 (34%), Positives = 99/199 (49%), Gaps = 33/199 (16%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVH---------TCSRNEVELNKCLKEWQ 62
LKG AL+TGG GIG+A A GA +V+ T R E E KCL
Sbjct: 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCL---- 99
Query: 63 SKGFVVSGSVCDAA-SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-SAEEYS 120
++ G V D A D E+ ++E+G +L+ILVNN + ++E +AE+
Sbjct: 100 ----LIPGDVSDEAFCKDAVEETVRELG-----RLDILVNNAAFQYPQQSLEDITAEQLD 150
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLT 178
K TN S +H+ + P LK G +I+ S+ G G+ ++ Y ATK A++ T
Sbjct: 151 KTFKTNIYSYFHMTKAALPHLK-QG-SAIINTGSITGYE--GNETLIDYSATKGAIHAFT 206
Query: 179 RNLACEWAKDNIRTNSVAP 197
R+LA + IR N+VAP
Sbjct: 207 RSLAQSLVQKGIRVNAVAP 225
|
Length = 290 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 6e-26
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTGG GIG A + LA G V C NE L+E + GF D +S
Sbjct: 3 ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSF 62
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ + + +V ++ G +++LVNN G + + E++S ++ TN S +++ Q V
Sbjct: 63 ESCKAAVAKVEAEL-GPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVI 121
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
++ G G I+ ISSV G + Y A KA M T+ LA E A + N+++P
Sbjct: 122 DGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPG 181
Query: 199 YTKTSLVERV 208
Y T +V +
Sbjct: 182 YIATDMVMAM 191
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.9 bits (249), Expect = 8e-26
Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL+G +TGG G+G+AT LA GA V R L++ L + + G
Sbjct: 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--I 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D P + + EV +F G+L+ LVN G + + A+ + ++ N ++T +
Sbjct: 62 DLVDPQAARRAVDEVNRQF-GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNA 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P L ASG G IV I + L Y A KA + +LT LA E I N
Sbjct: 121 SKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVN 180
Query: 194 SVAP 197
+V P
Sbjct: 181 AVLP 184
|
Length = 239 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-25
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 7/207 (3%)
Query: 3 NAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62
A ++ S + +TGG RGIG+A + A G + R+ K +
Sbjct: 255 PASTAQAPSPLAESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG 314
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSK 121
+ V + D A E ++ +++ G+L++LVNN G + KP++E SAE++++
Sbjct: 315 DEHLSVQADITDEA---AVESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTR 370
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ N + + L+ GV IV + S+ L + + Y A+KAA+ L+R+L
Sbjct: 371 VYDVNLSGAFACARAAARLMSQGGV--IVNLGSIASLLALPPRNAYCASKAAVTMLSRSL 428
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERV 208
ACEWA IR N+VAP Y +T V +
Sbjct: 429 ACEWAPAGIRVNTVAPGYIETPAVLAL 455
|
Length = 520 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 1e-25
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L+G A+VTG G G+ A GA V N + + + V
Sbjct: 1 MRLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADV 60
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTY 131
A + +++ SKF G+L+ILVNN G R KP +E EE+ ++ N +S Y
Sbjct: 61 TKRADVEA---MVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIY 116
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
Q + P ++ G G I+ I+S GL + Y A+K + T+ +A E A NIR
Sbjct: 117 LSAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176
Query: 192 TNSVAPWYTKTSLVERVM 209
N + P +T L+ M
Sbjct: 177 VNCLCPVAGETPLLSMFM 194
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 1e-25
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS-VCD-AAS 77
A+VTG T GIG+A EELA G V SR + +L+ KE + K V + + D +A
Sbjct: 4 AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTYHLCQ 135
D E++ +E+ G ILVNNVG + P +E +E I+ N +T + +
Sbjct: 64 DDIYERIEKELEGLDIG---ILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTR 120
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L+ P + G+IV ISS GL + Y A+KA ++ +R L E+ I S+
Sbjct: 121 LILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSL 180
Query: 196 APWYTKTSL 204
P+ T +
Sbjct: 181 LPYLVATKM 189
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.7 bits (249), Expect = 1e-25
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 6/195 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G A+VTGG IG A L GA V + + ++
Sbjct: 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIA---T 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D E+ + V ++F G+++ILVN T + + S ++ + N S L
Sbjct: 60 DITDDAAIERAVATVVARF-GRVDILVNLACTYL-DDGLASSRADWLAALDVNLVSAAML 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q +P L G G+IV +S+ +Y A+KAA+ QLTR++A + A D IR N
Sbjct: 118 AQAAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVN 176
Query: 194 SVAPWYTKTSLVERV 208
SV+P +T + +++ +
Sbjct: 177 SVSPGWTWSRVMDEL 191
|
Length = 261 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 2e-25
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
R L G L+TG + GIG+AT ++A GA V +RN L++ + E ++KG
Sbjct: 364 DLRGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAH 423
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAE---EYSKIMTTN 126
CD + ++++ ++ G ++ LVNN G +IR+ ++E S + +Y + M N
Sbjct: 424 AYTCDLTDSAAVDHTVKDILAEH-GHVDYLVNNAGRSIRR-SVENSTDRFHDYERTMAVN 481
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
+ L + P ++ G +V +SS+G ++ S Y A+KAA++ + A E
Sbjct: 482 YFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETL 541
Query: 187 KDNI----------RTNSVAP 197
D I RT +AP
Sbjct: 542 SDGITFTTIHMPLVRTPMIAP 562
|
Length = 657 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.3 bits (248), Expect = 2e-25
Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTG +RGIG+A + LA GA V SR + G C
Sbjct: 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALAC 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYH 132
+Q + L + + G+L+ILVNN N ++ + K + N +
Sbjct: 65 HIGEMEQIDALFAHIRERH-GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFF 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ L+K G GSIV ++SV G+S IY TKAA+ +T+ A E A IR
Sbjct: 124 MSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRV 183
Query: 193 NSVAPWYTKT 202
N++ P T T
Sbjct: 184 NALLPGLTDT 193
|
Length = 252 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 2e-25
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSG 70
+SLK +VTG RGIG+A LA G+ VV+ R E E+N+ LK + G G
Sbjct: 2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAE-EMNETLKMVKENGGEGIG 60
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
+ D ++ + E L + ++ G +ILVNN G + P + + K ++T+F+S
Sbjct: 61 VLADVSTREGCETLAKATIDRY-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSV 119
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ Q + ++ G +IV I+SV G+ SIYGA KAA+ LT+ LA E A I
Sbjct: 120 IYCSQELAKEMREGG--AIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KI 176
Query: 191 RTNSVAPWYTKTSLVERVM 209
R N++AP + KT L E +
Sbjct: 177 RVNAIAPGFVKTKLGESLF 195
|
Length = 252 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 98.9 bits (247), Expect = 3e-25
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G TAL+TGGT GIG T + GA V R+ L E V+ D
Sbjct: 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIR---AD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A ++ L Q + F G+L+ + N G P ++ + + TN + Y L
Sbjct: 61 AGDVAAQKALAQALAEAF-GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLI 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q + PLL A+ SIV S+ +H+G + S+Y A+KAA+ L + L+ E IR
Sbjct: 120 QALLPLL-ANP-ASIVLNGSIN--AHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRV 175
Query: 193 NSVAPWYTKTSL 204
N+V+P +T L
Sbjct: 176 NAVSPGPVQTPL 187
|
Length = 249 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 97.8 bits (244), Expect = 5e-25
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 23/200 (11%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV--ELNKCLKEWQSKGFVVSG 70
LKG ALVTG + GIG+A LA GA VV+ S+ + E+ + +K K V
Sbjct: 1 LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQA 60
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
V + L Q +F G L+ILVNN G + E + E+++K++ N
Sbjct: 61 DVSK---EEDVVALFQSAIKEF-GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQ 116
Query: 131 YHLC--QLVYPLLKASGVGSIVFISSV------GGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ LC + + K+ G I+ +SSV G + Y A+K + +T+ LA
Sbjct: 117 F-LCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVN------YAASKGGVKMMTKTLA 169
Query: 183 CEWAKDNIRTNSVAPWYTKT 202
E+A IR N++AP T
Sbjct: 170 QEYAPKGIRVNAIAPGAINT 189
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 9e-25
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G ++TG + GIG+A LA GA + +RNE L +E G D +
Sbjct: 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE-YSKIMTTNFESTYHLCQ 135
+ E+LI+ ++F G ++ILVNN G + E + + ++M N+ +
Sbjct: 61 DAEACERLIEAAVARF-GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTH 119
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
P LKAS G IV +SS+ GL+ V + S Y A+K A++ +L E A D + V
Sbjct: 120 AALPHLKASR-GQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVV 178
Query: 196 APWYTKTSLVER 207
P + T + +R
Sbjct: 179 CPGFVATDIRKR 190
|
Length = 263 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 1e-24
Identities = 62/192 (32%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G A+VTG GIG A LA GA V + + + + V D
Sbjct: 1 LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
Q L + +F G L++LVNN G ++ I+ + + M N T+
Sbjct: 61 EQ---QVAALFERAVEEFGG-LDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLC 116
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
C+ P + A G GSIV +SS+ G S YGA+KAA+ LTR LA E IR N
Sbjct: 117 CRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCN 176
Query: 194 SVAPWYTKTSLV 205
++AP T L+
Sbjct: 177 ALAPGLIDTPLL 188
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.4 bits (240), Expect = 2e-24
Identities = 57/186 (30%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
A+VTG GIGQA E LA GA V N + K+ + G D
Sbjct: 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNV---GTNIRKPTIEYSAEEYSKIMTTNFESTY 131
+ PD + + S F G ++ LVNN G I + Y K M+ N +
Sbjct: 64 VSDPDSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGAL 122
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ VY + G G+IV SS + + YG K +N LT+ LA E NIR
Sbjct: 123 VCTRAVYKHMAKRGGGAIVNQSSTAAWLY---SNFYGLAKVGLNGLTQQLARELGGMNIR 179
Query: 192 TNSVAP 197
N++AP
Sbjct: 180 VNAIAP 185
|
Length = 250 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 96.1 bits (239), Expect = 2e-24
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G ALVTG + GIG+AT LA GA V +R L E +++G D
Sbjct: 1 LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
Q + ++ G+L+ILVNN G + P + ++++++ TN +
Sbjct: 61 VTDEQQVDAAVERTVEAL-GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTT 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
P G+IV ISSV G V + ++Y ATK +N + L E + +R
Sbjct: 120 HAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVV 179
Query: 195 VAPWYTKTSLVERV 208
+ P T L + +
Sbjct: 180 IEPGTVDTELRDHI 193
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 96.4 bits (240), Expect = 2e-24
Identities = 60/191 (31%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+G +VTG +GIG+ E LAG GA V R+E+ +++ L E + G D
Sbjct: 2 FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAGDAAHVHTAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ + +++ +F G++++L+NNVG T KP Y E+ + + T
Sbjct: 61 LETYAGAQGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119
Query: 134 CQLVYPLLKASGVGSIVFISSVG--GLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
C+ V P + G IV +SS+ G+ + Y A K +N LT +LA E A+D IR
Sbjct: 120 CRAVLPHMLERQQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTASLAFEHARDGIR 175
Query: 192 TNSVAPWYTKT 202
N+VAP T+
Sbjct: 176 VNAVAPGGTEA 186
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 4e-24
Identities = 73/211 (34%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVV-------HTCSRNEVELNKC 57
E S+K S LKG AL+TGG GIG+A A GA V E + K
Sbjct: 15 EKSYKGSG-KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETK--KL 71
Query: 58 LKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-SA 116
++E K ++ G D L++EV +F GKL+ILVNN + +IE +
Sbjct: 72 IEEEGRKCLLIPG---DLGDESFCRDLVKEVVKEF-GKLDILVNNAAYQHPQESIEDITT 127
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAM 174
E+ K TN S ++L + P LK G SI+ +SV + GS + Y ATK A+
Sbjct: 128 EQLEKTFRTNIFSMFYLTKAALPHLK-KG-SSIINTTSVTA--YKGSPHLLDYAATKGAI 183
Query: 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205
TR L+ + A+ IR N+VAP T L+
Sbjct: 184 VAFTRGLSLQLAEKGIRVNAVAPGPIWTPLI 214
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 95.6 bits (238), Expect = 5e-24
Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK-GFVVSGSVC 73
KG ALVTG T GIG LA GA +V + E+ +K G V
Sbjct: 1 KGKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGA 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + P E ++ +F G ++ILVNN G P ++ E++ I+ N + +H
Sbjct: 61 DLSKPAAIEDMVAYAQRQF-GGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHT 119
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIR 191
+L P +K G G I+ I+SV GL V S S Y A K + LT+ +A E A +
Sbjct: 120 TRLALPHMKKQGWGRIINIASVHGL--VASANKSAYVAAKHGVVGLTKVVALETAGTGVT 177
Query: 192 TNSVAPWYTKTSLVER 207
N++ P + T LVE+
Sbjct: 178 CNAICPGWVLTPLVEK 193
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 7e-24
Identities = 58/185 (31%), Positives = 91/185 (49%), Gaps = 9/185 (4%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
G +VTG +GIG+ A GA V R+E+ +++ E ++ G D
Sbjct: 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADL 65
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLC 134
+ + + F G++++L+NNVG I KP EY E+ + + T C
Sbjct: 66 ETYAGAQAAMAAAVEAF-GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCC 124
Query: 135 QLVYPLLKASGVGSIVFISSV--GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V P + A G G+IV +SS+ G++ V Y A K +N LT +LA E+A+ IR
Sbjct: 125 RAVLPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFEYAEHGIRV 180
Query: 193 NSVAP 197
N+VAP
Sbjct: 181 NAVAP 185
|
Length = 260 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 1e-23
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G T L+TGG GIG A + LG V C RNE L + E + VC
Sbjct: 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE----IHTEVC 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT----TNFES 129
D A D R +L++ + ++ LN+L+NN G I++ AE+ TN +
Sbjct: 58 DVADRDSRRELVEWLKKEYP-NLNVLINNAG--IQRNEDLTGAEDLLDDAEQEIATNLLA 114
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD- 188
L L+ P L +I+ +SS + S +Y ATKAA++ T L E KD
Sbjct: 115 PIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALR-EQLKDT 173
Query: 189 NIRTNSVAPWYTKTS 203
++ +AP T+
Sbjct: 174 SVEVIELAPPLVDTT 188
|
Length = 245 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 1e-23
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC-DAA 76
T L+TG + GIG+AT A GA + R L + E +K V + D +
Sbjct: 1 KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ E ++ + +F ++ILVNN G + P E E++ ++ TN + ++ +
Sbjct: 61 DRESIEAALENLPEEF-RDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTR 119
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L+ P++ A G I+ + S+ G G++Y ATKAA+ Q + NL + IR ++
Sbjct: 120 LILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNI 179
Query: 196 APWYTKT--SLV 205
P +T SLV
Sbjct: 180 EPGLVETEFSLV 191
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 93.5 bits (233), Expect = 3e-23
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
LVTG +GIG A LA GA V RN +L + + + + G+ + D A
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
++++Q + + G +++LVN G S E++ N +++ Q V P
Sbjct: 61 AVDEVVQRLERE-YGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+K G+IV + S ++V + Y A+KAA+ LT+ L E A IR N V+P
Sbjct: 120 RMKRRRSGAIVTVGS--NAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSP 177
Query: 198 WYTKT 202
T T
Sbjct: 178 GSTDT 182
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 3e-23
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLK A++TGGT +G A LA GA V RN+ + +K KE + G
Sbjct: 2 SLKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI--------------EYSAEEY 119
D E+ +E+ ++F G ++IL+N G N T + E +
Sbjct: 62 DVLDRASLERAREEIVAQF-GTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
+ N ++ Q+ + GSI+ ISS+ S + Y A KAA++ T+
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQ 180
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210
LA E+A +R N++AP + T +++
Sbjct: 181 WLAVEFATTGVRVNAIAPGFFVTPQNRKLLI 211
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 92.9 bits (231), Expect = 4e-23
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
+VTG +GIG+A L GA V V L G + + D A
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLL-------LEYGDPLRLTPLDVADAA 53
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
++ + ++ +G ++ LVN G T S E++ + N ++L Q V P
Sbjct: 54 AVREVCSRLLAE-HGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+K G+IV ++S +HV S+ YGA+KAA+ L++ L E A +R N V+P
Sbjct: 113 HMKDRRTGAIVTVAS--NAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSP 170
Query: 198 WYTKTSL 204
T T++
Sbjct: 171 GSTDTAM 177
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 93.1 bits (231), Expect = 4e-23
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 4/197 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELA--GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L G A+VTGG +GIG+A LA G V++ S E N + E +G V
Sbjct: 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAEN-LVNELGKEGHDVYAV 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + + +L++E + F GK++ILVNN G + + + E++ +++ N S +
Sbjct: 62 QADVSKVEDANRLVEEAVNHF-GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVF 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ V P + + G I+ ISS+ G + + Y A KA M T++LA E AK N+
Sbjct: 121 NTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVT 180
Query: 192 TNSVAPWYTKTSLVERV 208
N++ P + T +V V
Sbjct: 181 VNAICPGFIDTEMVAEV 197
|
Length = 247 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 92.5 bits (230), Expect = 6e-23
Identities = 61/193 (31%), Positives = 83/193 (43%), Gaps = 6/193 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTGG +GIG+ E LA G V NE + KE G D +
Sbjct: 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
DQ I + KF G +++VNN G P +E + EE K+ N + Q
Sbjct: 62 DQVFSAIDQAAEKF-GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120
Query: 139 PLLKASGV-GSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
K G G I+ +S+ G H G+ S Y +TK A+ LT+ A E A I N+
Sbjct: 121 RQFKKQGHGGKIINAASIAG--HEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAY 178
Query: 196 APWYTKTSLVERV 208
P KT + E +
Sbjct: 179 CPGIVKTPMWEEI 191
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 7e-23
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 13/201 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A++TGG GIG+AT A GA V ++ E +S CD
Sbjct: 2 LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPD--ISFVHCD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTN----FE 128
+ ++F G+L+I+ NN G +E S EE+ +++ N F
Sbjct: 60 VTVEADVRAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFL 118
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
T H +++ P + GSIV ++SV G+ Y A+K A+ LTR+ A E +
Sbjct: 119 GTKHAARVMIP----AKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEH 174
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
IR N V+P+ T L+
Sbjct: 175 GIRVNCVSPYGVATPLLTAGF 195
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.3 bits (230), Expect = 8e-23
Identities = 65/195 (33%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G AL+TGG GIG+A VE GA V R+ +L + + VV G D
Sbjct: 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEG---D 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNFES 129
S ++ + + F GKL+ V N G T++ E + +I N +
Sbjct: 61 VTSYADNQRAVDQTVDAF-GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKG 119
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ P LKASG GS++F S G G +Y A+K A+ L R LA E A
Sbjct: 120 YLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK- 177
Query: 190 IRTNSVAPWYTKTSL 204
IR N VAP T T L
Sbjct: 178 IRVNGVAPGGTVTDL 192
|
Length = 263 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.3 bits (230), Expect = 9e-23
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSG 70
L G A++TG + GIG+A + A GA V +R + EL++ + E +++G ++G
Sbjct: 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFES 129
V D A + L+ +F G L+I NN GT P E S E + + + TN S
Sbjct: 63 DVRDEAY---AKALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTS 118
Query: 130 TYHLCQLVYPLLKASGVGSIVFISS-VG---GLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+ + P + A G GS++F S+ VG G + + Y A+KA + LT+ LA E+
Sbjct: 119 AFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAA---YAASKAGLIGLTQVLAAEY 175
Query: 186 AKDNIRTNSVAPWYTKT 202
IR N++ P T T
Sbjct: 176 GAQGIRVNALLPGGTDT 192
|
Length = 254 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 1e-22
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV--------ELNKCLKEWQSKGFVVSGS 71
A +TG G+G+A +A GA V N+ E+N E + V
Sbjct: 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQ--- 58
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D Q + L+ + G L++LVNN G + +E+ ++M N ES +
Sbjct: 59 --DVTDEAQWQALLAQAADAMGG-LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIF 115
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD--N 189
C+ P L+AS SIV ISSV + Y A+KAA+ LT+++A + A+ +
Sbjct: 116 LGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLD 175
Query: 190 IRTNSVAPWYTKTSLVE 206
+R NS+ P + +T +V+
Sbjct: 176 VRCNSIHPTFIRTGIVD 192
|
Length = 251 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.3 bits (227), Expect = 3e-22
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G L+TG + GIG+A E+ A GA V +R E L+ G CD
Sbjct: 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCD 97
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAE---EYSKIMTTNFESTY 131
+ D + L+ +V + G ++IL+NN G +IR+P E S + + + M N+ +
Sbjct: 98 LSDLDAVDALVADVEKRI-GGVDILINNAGRSIRRPLAE-SLDRWHDVERTMVLNYYAPL 155
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNI 190
L + + P + G G I+ +++ G LS S+Y A+KAA++ ++R + EW +
Sbjct: 156 RLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGV 215
Query: 191 RTNSV 195
+ ++
Sbjct: 216 HSTTL 220
|
Length = 293 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.5 bits (224), Expect = 4e-22
Identities = 61/199 (30%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+ L G AL+TG + GIG+ GA V +R+ L K E + G V
Sbjct: 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVC 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD + Q ++ +V ++ G ++I V N G P ++ EE+ ++ TN +
Sbjct: 65 CDVSQHQQVTSMLDQVTAELGG-IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFL 123
Query: 133 LCQLVYPLLKASGVG-SIVFISSVGGLSHV----GSGSIYGATKAAMNQLTRNLACEWAK 187
Q + G G I+ +S+ G H+ S Y A+KAA+ LT+ +A E A
Sbjct: 124 TAQAAAKAMVKQGQGGVIINTASMSG--HIINVPQQVSHYCASKAAVIHLTKAMAVELAP 181
Query: 188 DNIRTNSVAPWYTKTSLVE 206
IR NSV+P Y T LVE
Sbjct: 182 HKIRVNSVSPGYILTELVE 200
|
Length = 253 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 4e-22
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTGGT+G+G A A GA + C RN + E ++ G
Sbjct: 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + + +++ F G+L+ LVN G R ++ S E + + N + + L
Sbjct: 64 DLSDVEDCRRVVAAADEAF-GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFL 122
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNI 190
Q L++ G+IV I S+ +H G + Y A+K A+ LTRN A ++ I
Sbjct: 123 MQEAIKLMRRRKAEGTIVNIGSMS--AHGGQPFLAAYCASKGALATLTRNAAYALLRNRI 180
Query: 191 RTNSVAPWYTKT 202
R N + + T
Sbjct: 181 RVNGLNIGWMAT 192
|
Length = 260 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 90.0 bits (224), Expect = 7e-22
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 5/191 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK L+TG + GIGQA E LA GA + RN +L G V D
Sbjct: 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRW-VVAD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S RE ++ + G +N+L+NN G N + E +++ N + L
Sbjct: 62 LTSEAGREAVLARA--REMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLT 119
Query: 135 QLVYPLLKASGVGSIVFI-SSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ + PLL+A +V + S+ G + + G + Y A+K A+ + L E A +R
Sbjct: 120 RALLPLLRAQPSAMVVNVGSTFGSIGYPGY-ASYCASKFALRGFSEALRRELADTGVRVL 178
Query: 194 SVAPWYTKTSL 204
+AP T+T++
Sbjct: 179 YLAPRATRTAM 189
|
Length = 263 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 9e-22
Identities = 53/206 (25%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-------------VVHTCSRNEVELNKCLKEW 61
L+G A +TG RG G+A LA GA +L++ +
Sbjct: 1 LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60
Query: 62 QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
++ G V D + ++++ +F G+L+++V N G + E S E++
Sbjct: 61 EALGRKVLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLSYGRSWELSEEQWDT 119
Query: 122 IMTTNFESTYHLCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++ N + C+ V P +++ GSI+ SSV GL + + Y A K + LT+
Sbjct: 120 VLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKT 179
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVE 206
LA E A+ IR NS+ P+ T ++
Sbjct: 180 LANELAEYGIRVNSIHPYSVDTPMIA 205
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.8 bits (221), Expect = 1e-21
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 4/191 (2%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
L+TGG GIG+ E A GA V NE + + G V CD +
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
++ + +++ + G + IL+NN G K +E EE K N + + +
Sbjct: 61 EEVYEAAKKIKKEV-GDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE---WAKDNIRTNSV 195
P + G IV I+SV GL + Y A+KAA +L E + K I+T V
Sbjct: 120 PDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179
Query: 196 APWYTKTSLVE 206
P++ T + +
Sbjct: 180 CPYFINTGMFQ 190
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 2e-21
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 9/186 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGSV 72
L+G A+VTGG+ GIG ATVE L GA V C R+E L + G + +
Sbjct: 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD V ++F G +++LVNN G + + + + + + S +
Sbjct: 66 CDVLDEADVAAFAAAVEARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVIN 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLS---HVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ PLL+AS SIV ++S+ L H+ + S A +A + L ++LA E A
Sbjct: 125 PTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATS---AARAGLLNLVKSLATELAPKG 181
Query: 190 IRTNSV 195
+R NS+
Sbjct: 182 VRVNSI 187
|
Length = 265 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 2e-21
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 9/205 (4%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+SL G L+TG +GIG LA GA + + + + +G +
Sbjct: 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAP 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
+ + E I+ + G +++L+NN G R P E+ +E++ ++ N + +
Sbjct: 65 FNVTHKQEVEAAIEHIEKDI-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFL 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNI 190
+ Q V + G I+ I S+ S +G +I Y A+K A+ LTR + E A+ NI
Sbjct: 124 VSQAVARYMVKRQAGKIINICSMQ--SELGRDTITPYAASKGAVKMLTRGMCVELARHNI 181
Query: 191 RTNSVAPWYTKT----SLVERVMFS 211
+ N +AP Y KT +LVE F+
Sbjct: 182 QVNGIAPGYFKTEMTKALVEDEAFT 206
|
Length = 254 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 2e-21
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 8/183 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
++TG +RGIG+A EEL G +VV +R+E L + LKE G V+ D +
Sbjct: 1 VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQE-LKEELRPGLRVTTVKADLS 59
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
E+L++ + +G+ ++L+NN G+ +E K N S L
Sbjct: 60 DAAGVEQLLEAIRKL-DGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118
Query: 136 LVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ K G+ ++V +SS ++ +Y ++KAA + R LA E + ++R S
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAE--EPDVRVLS 176
Query: 195 VAP 197
AP
Sbjct: 177 YAP 179
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 2e-21
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 20 ALVTGGTRGIGQATVEELAGLG-AVVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDA 75
L+TG +RGIG V +L G V R+ EL L S+ ++ V D
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAA-LGASHSRLHILELDVTDE 59
Query: 76 ASPDQREKLIQEVGSKF-NGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ + + V + + L++L+NN G + P E +E+ ++ N L
Sbjct: 60 IA-----ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLL 114
Query: 134 CQLVYPLLKASGVGSIVFISSVGG---LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
Q PLL I+ ISS G + G Y A+KAA+N LT++LA E +D I
Sbjct: 115 TQAFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGI 174
Query: 191 RTNSVAPWYTKTSL 204
S+ P + +T +
Sbjct: 175 TVVSLHPGWVRTDM 188
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 2e-21
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVCD 74
+ L+TG IG+A + L GA + N L + +E + V D
Sbjct: 1 EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI---EYSAEEYSKIMTTNFESTY 131
S + ++LI+ KF G+++IL+NN + + E+ E++++++ N +
Sbjct: 61 ITSKESIKELIESYLEKF-GRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGL----------SHVGSGSIYGATKAAMNQLTRNL 181
Q L K G GSI+ I+S+ G+ + + S Y KA + LT+ L
Sbjct: 120 LCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYL 179
Query: 182 ACEWAKDNIRTNSVAP 197
A +A IR N+++P
Sbjct: 180 AKYYADTGIRVNAISP 195
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 2e-21
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK A+VTGG++GIG+A V L G+ V E N F D
Sbjct: 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND------VDYFK-----VD 52
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ +Q K I V SK+ G+++ILVNN G +E+ +I+ N + +
Sbjct: 53 VSNKEQVIKGIDYVISKY-GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMS 111
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P + G I+ I+SV + + + Y +K A+ LTR++A ++A IR +
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVA 170
Query: 195 VAPWYTKTSLVE 206
V P +T L+E
Sbjct: 171 VCPGSIRTPLLE 182
|
Length = 258 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 2e-21
Identities = 51/181 (28%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDA 75
ALVTG +RGIG+A LA G + +R+ + +E ++ G V +V D
Sbjct: 7 ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD- 65
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
++ +++ ++ +F G+L++ VNN + + +P +E + M N ++ Q
Sbjct: 66 --VEKIKEMFAQIDEEF-GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQ 122
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L++ G G I+ +SS+G + ++ + + G +KAA+ LTR LA E A I N+V
Sbjct: 123 EAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAV 182
Query: 196 A 196
+
Sbjct: 183 S 183
|
Length = 250 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 87.4 bits (217), Expect = 4e-21
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
L+TG + GIG+A E A G V +R L++ E + V + D +
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
+ + +I E+ G L++++ N G + S + + + + TN + + P
Sbjct: 61 RNQLVIAEL-EAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY 199
+A G G +V ISSV L + + Y A+KAA++ L +L + K IR + P +
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179
Query: 200 TKTSLVERV 208
T L +
Sbjct: 180 IDTPLTANM 188
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 5e-21
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ALVTGGT+GIG ATV L GA V T +R+ + + FV + D
Sbjct: 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD-----DLPEGVEFVAA----D 57
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA---EEYSKIMTTNFESTY 131
+ + + + V + G ++ILV+ +G + P ++A EE+ + N +
Sbjct: 58 LTTAEGCAAVARAVLERL-GGVDILVHVLGGS-SAPAGGFAALTDEEWQDELNLNLLAAV 115
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNI 190
L + + P + A G G I+ ++S+ + + Y A KAA++ +++L+ E A +
Sbjct: 116 RLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGV 175
Query: 191 RTNSVAPWYTKTS----LVERVM 209
R N+V+P + +T L ER+
Sbjct: 176 RVNTVSPGWIETEAAVALAERLA 198
|
Length = 260 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 6e-21
Identities = 71/208 (34%), Positives = 115/208 (55%), Gaps = 20/208 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQS---KGFVVS 69
+L G ALVTG +RGIG+A LA GA+V RN+ ++ ++E +S K F++
Sbjct: 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIE 62
Query: 70 GSVCDAASPDQREKLIQEVGSKFN-----GKLNILVNNVGTNIRKPTIEYSAEE-YSKIM 123
D S D +KL++++ ++ +++ILVNN G + TIE + EE + +IM
Sbjct: 63 A---DLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQG-TIENTTEEIFDEIM 118
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSI-YGATKAAMNQLTRNL 181
N ++ + L Q PLL+A G ++ ISS +G +GSI YG +K A+N +T L
Sbjct: 119 AVNIKAPFFLIQQTLPLLRAE--GRVINISSAE--VRLGFTGSIAYGLSKGALNTMTLPL 174
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERVM 209
A + I N++ P YTKT + +++
Sbjct: 175 AKHLGERGITVNTIMPGYTKTDINAKLL 202
|
Length = 254 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 7e-21
Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG + GIG+AT E+LA G V SRN G + D
Sbjct: 6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA------PIPGVELL--ELDVTDD 57
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ + EV ++ G++++LVNN G + E S + + TN + + V
Sbjct: 58 ASVQAAVDEVIARA-GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL 116
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++A G G I+ ISSV G ++Y A+K A+ + +L E + IR + V P
Sbjct: 117 PHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPA 176
Query: 199 YTKTSL 204
YTKT+
Sbjct: 177 YTKTNF 182
|
Length = 270 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.1 bits (216), Expect = 8e-21
Identities = 54/185 (29%), Positives = 78/185 (42%), Gaps = 6/185 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVCDAAS 77
TALVTG GIGQA G V + L FV V+ + DAAS
Sbjct: 4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAAS 63
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
L + G +++LV N G + + + N E+ Y + V
Sbjct: 64 LAAA--LANAAAER--GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAV 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+ G++V I SV G++ +G + Y A KA + T+ LA E+ + IR N+VAP
Sbjct: 120 LEGMLKRSRGAVVNIGSVNGMAALGHPA-YSAAKAGLIHYTKLLAVEYGRFGIRANAVAP 178
Query: 198 WYTKT 202
KT
Sbjct: 179 GTVKT 183
|
Length = 257 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 1e-20
Identities = 56/194 (28%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+KG LVTG RGIG+A VE+L GA V+ +R+ + + + + V
Sbjct: 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV----TDLGPRVVPLQLDV 58
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTY 131
D AS + +V ILVNN G +E + M TN+
Sbjct: 59 TDPASVAAAAEAASDV--------TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPL 110
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ + P+L A+G G+IV + SV + + Y A+KAA LT+ L E A R
Sbjct: 111 AMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTR 170
Query: 192 TNSVAPWYTKTSLV 205
V P T +
Sbjct: 171 VLGVHPGPIDTDMA 184
|
Length = 238 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 2e-20
Identities = 49/195 (25%), Positives = 80/195 (41%), Gaps = 14/195 (7%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ G T VTG +GIG A GA V + + + +
Sbjct: 1 MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE---------DYPFA 51
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
V D + ++ Q + ++ G L++LVN G T S E++ + N
Sbjct: 52 TFVLDVSDAAAVAQVCQRLLAE-TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGG 110
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAK 187
++L + V P + G+IV + S +HV + YGA+KAA+ L + + E A
Sbjct: 111 AFNLFRAVMPQFRRQRSGAIVTVGS--NAAHVPRIGMAAYGASKAALTSLAKCVGLELAP 168
Query: 188 DNIRTNSVAPWYTKT 202
+R N V+P T T
Sbjct: 169 YGVRCNVVSPGSTDT 183
|
Length = 252 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 85.6 bits (212), Expect = 2e-20
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
G AL+T +GIG+A A GA V NE +L + +G ++ V D
Sbjct: 1 DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKEL-----ERGPGITTRVLDV 55
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+Q L +E G ++++L N G ++ +++ M N S Y + +
Sbjct: 56 TDKEQVAALAKEEG-----RIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIK 110
Query: 136 LVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
V P + A GSI+ +SSV + V + +Y TKAA+ LT+++A ++A+ IR N+
Sbjct: 111 AVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNA 170
Query: 195 VAPWYTKT-SLVERV 208
+ P T SL ER+
Sbjct: 171 ICPGTVDTPSLEERI 185
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 2e-20
Identities = 54/192 (28%), Positives = 81/192 (42%), Gaps = 3/192 (1%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAAS 77
A++TG +GIG+A E LA G + N E ++E G+ D
Sbjct: 4 VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D E LI + KF G +++VNN G P + + E+ K+ N Q
Sbjct: 64 KDDVEALIDQAVEKF-GSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122
Query: 138 YPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
K G G I+ SS+ G+ + Y A+K A+ LT+ A E A I N+ A
Sbjct: 123 ARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYA 182
Query: 197 PWYTKTSLVERV 208
P KT + + +
Sbjct: 183 PGIVKTEMWDYI 194
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 3e-20
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
AL+TG + GIG+AT A G + +R++ L E +S G + D ++P
Sbjct: 8 RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ I E+ +F G ++L+NN G P +E ++ ++ N S + C V
Sbjct: 68 EAIAPGIAELLEQF-GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++A G G I+ +SS+ + Y +KAA+ T+ LA E IR ++
Sbjct: 127 PGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLG 186
Query: 199 YTKTSL 204
T L
Sbjct: 187 AVNTPL 192
|
Length = 241 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 85.3 bits (212), Expect = 4e-20
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLKG A++TGG +G A +ELA GA V RN+ + + E ++ G
Sbjct: 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKA 66
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY---------------SAEE 118
D + E+ Q++ F G +IL+N G N K T + E
Sbjct: 67 DVLDKESLEQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG 125
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
+ + N T Q+ + G+I+ ISS+ + + Y A KAA++ T
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFT 185
Query: 179 RNLACEWAKDNIRTNSVAP 197
+ LA +AK IR N++AP
Sbjct: 186 QWLAVHFAKVGIRVNAIAP 204
|
Length = 278 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 5e-20
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVV 68
+ L G A VTG GIGQ LA GA V R + L + + ++ G +
Sbjct: 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQI 63
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
+ V A + ++ G L + VN G P E E++ +M N
Sbjct: 64 AADVTSKADLRAA---VARTEAEL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLT 119
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVG-SGSIYGATKAAMNQLTRNLACEWA 186
+ CQ + +G GSIV I+S+ G + + G + Y A+KA + L+++LA EW
Sbjct: 120 GVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWV 179
Query: 187 KDNIRTNSVAPWYTKTSLVER 207
IR NS++P YT T + R
Sbjct: 180 GRGIRVNSISPGYTATPMNTR 200
|
Length = 254 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 84.6 bits (209), Expect = 5e-20
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG------FVV 68
L LVTG + GIG+ A GA V RNE +L + +G F++
Sbjct: 2 LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNF 127
C + + ++L Q + + +L+ +++N G P E + + + + N
Sbjct: 62 DLLTCTS---ENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNV 117
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+T+ L Q + PLL S GS+VF SS G + Y +K A L + LA E+ +
Sbjct: 118 NATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQ 177
Query: 188 DNIRTNSVAPWYTKTS 203
N+R N + P T+T+
Sbjct: 178 RNLRVNCINPGGTRTA 193
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 5e-20
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L A+VTG +RGIG A LA G AV + + ++ + E ++ G
Sbjct: 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A +L + F G++++LVNN G ++ E++ + + TN + +
Sbjct: 63 DVADAAAVTRLFDAAETAF-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVV 121
Query: 134 CQLVYPLLKASGVGSIVFIS-SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ L G I+ +S SV L G Y A+KAA+ L LA E I
Sbjct: 122 LREAARHLGQGG--RIINLSTSVIALPLPG-YGPYAASKAAVEGLVHVLANELRGRGITV 178
Query: 193 NSVAPWYTKTSL 204
N+VAP T L
Sbjct: 179 NAVAPGPVATEL 190
|
Length = 245 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 6e-20
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 31/209 (14%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGS 71
L+G ALVTG + G+G + LA GA V SR L + E +++G VVS
Sbjct: 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66
Query: 72 VCDAASPDQREKLIQ--------EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
V D S I+ E G+ ++ILVNN G + + ++ + ++ +
Sbjct: 67 VTDYQS-------IKAAVAHAETEAGT-----IDILVNNSGVSTTQKLVDVTPADFDFVF 114
Query: 124 TTNFESTYHLCQLVYP--LLKASGVGS------IVFISSVGGLSHVGSGSIYGATKAAMN 175
TN + + Q V + +A G G+ I+ I+SV GL + +Y +KAA+
Sbjct: 115 DTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVV 174
Query: 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSL 204
+TR +A EW + I N++ P Y T +
Sbjct: 175 HMTRAMALEWGRHGINVNAICPGYIDTEI 203
|
Length = 258 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 8e-20
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEEL--AGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
+ AL+TGG R IG A L AG +H R+ E + E + + GS
Sbjct: 3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAELNA---LRPGS 58
Query: 72 VC----DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
D PD +L+ + F G+L+ LVNN + P + ++ + +N
Sbjct: 59 AAALQADLLDPDALPELVAACVAAF-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNL 117
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
++ + L Q P L+ G+IV I+ + + +Y A KAA+ LTR+LA E A
Sbjct: 118 KAPFFLSQAAAPQLRKQR-GAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP 176
Query: 188 DNIRTNSVAP 197
+ +R N+VAP
Sbjct: 177 E-VRVNAVAP 185
|
Length = 249 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 82.7 bits (205), Expect = 2e-19
Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 19/190 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVC 73
T L+TG GIG A GA V ++K K S F + +
Sbjct: 3 FMTKTVLITGAASGIGLAQARAFLAQGAQV-------YGVDKQDKPDLSGNFHFLQLDLS 55
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYH 132
D P L V ++IL N G + KP ++ S EE+ I TN ST+
Sbjct: 56 DDLEP-----LFDWVP-----SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFL 105
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + P + G I+ + S+ G G+ Y A+K A+ T+ LA ++AKD I+
Sbjct: 106 LTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQV 165
Query: 193 NSVAPWYTKT 202
+AP KT
Sbjct: 166 FGIAPGAVKT 175
|
Length = 235 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 2e-19
Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 11/195 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG AL+TGG G+G+A VE GA V R+ ++ + ++ V G D
Sbjct: 2 LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEG---D 58
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNFES 129
S E+ + +F GKL+ + N G T++ E E + ++ N +
Sbjct: 59 VRSLADNERAVARCVERF-GKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKG 117
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ P L A+ GS++F S G G G +Y A+K A+ L + LA E A +
Sbjct: 118 YILGAKAALPALYATE-GSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAP-H 175
Query: 190 IRTNSVAPWYTKTSL 204
IR N VAP T L
Sbjct: 176 IRVNGVAPGGMVTDL 190
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 3e-19
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVH-TCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
A+VT GIG+A LA G + T +E + +E +S G D +
Sbjct: 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD 63
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL- 136
+ + + ++ + G++++LVNN G + P ++ +E+ KI T + + + Q+
Sbjct: 64 LPEGAQALDKLIQRL-GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIA 122
Query: 137 VYPLLKASGVGSIVFISSVGGLSH-----VGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
++K G I+ I+SV H G+ S Y A K A+ LT+ +A E + I
Sbjct: 123 ARHMVKQGQGGRIINITSV----HEHTPLPGA-SAYTAAKHALGGLTKAMALELVEHGIL 177
Query: 192 TNSVAP 197
N+VAP
Sbjct: 178 VNAVAP 183
|
Length = 256 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 3e-19
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+SL+G A+VTG G+GQ LA G + N VE + +++ + G
Sbjct: 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDI--VGINIVEPTETIEQVTALGRRFLSLT 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D D L++ ++F G ++ILVNN G R+ IE+S +++ +M N +S +
Sbjct: 64 ADLRKIDGIPALLERAVAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFF 122
Query: 133 LCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDN 189
+ Q A G G I+ I+S+ LS G + Y A+K+ + +TR +A EWAK N
Sbjct: 123 MSQAAAKHFIAQGNGGKIINIASM--LSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHN 180
Query: 190 IRTNSVAPWYTKTS 203
I N++AP Y T+
Sbjct: 181 INVNAIAPGYMATN 194
|
Length = 253 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 3e-19
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 16/206 (7%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RW G ALVTG + GIG A L G V C+R ++ E QS G +
Sbjct: 3 RWR--GRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAG---YPT 57
Query: 72 V----CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
+ CD ++ +Q + + ++ G +++ +NN G +P + E + ++ N
Sbjct: 58 LFPYQCDLSNEEQILSMFSAIRTQHQG-VDVCINNAGLARPEPLLSGKTEGWKEMFDVNV 116
Query: 128 ESTYHLCQLVYPLLKASGV--GSIVFISSVGG--LSHVGSGSIYGATKAAMNQLTRNLAC 183
+ + Y +K V G I+ I+S+ G + V Y ATK A+ LT L
Sbjct: 117 LALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQ 176
Query: 184 E--WAKDNIRTNSVAPWYTKTSLVER 207
E AK +IR S++P +T +
Sbjct: 177 ELREAKTHIRATSISPGLVETEFAFK 202
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 82.7 bits (205), Expect = 3e-19
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
++ + G +V GGT GI + A GA V SR++ +++ + + Q G
Sbjct: 2 TTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGL 61
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
G D E ++ +F G +++LV+ N P SA + ++ +
Sbjct: 62 GVSADVRDYAAVEAAFAQIADEF-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLG 120
Query: 130 TYHLCQLVYPLLKASGVGSIVFISS------VGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
T+++ + YPLL+ G SI+ IS+ + +HV A KA ++ LTR LA
Sbjct: 121 TFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVC------AAKAGVDMLTRTLAL 173
Query: 184 EWAKDNIRTNSVAP 197
EW + IR NS+ P
Sbjct: 174 EWGPEGIRVNSIVP 187
|
Length = 264 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 5e-19
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 10/189 (5%)
Query: 18 MTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
ALVTGG RGIG LA G + ++ EL +E ++ G V D A
Sbjct: 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNN--VGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
E ++ + + G+++ LVNN VG +R ++ + E + +++ N + L
Sbjct: 63 DLSAHEAMLDAAQAAW-GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLT 121
Query: 135 QLVYP-LLKASG-----VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
Q V +L SIVF+SSV + + Y +KA ++ + A A++
Sbjct: 122 QAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEE 181
Query: 189 NIRTNSVAP 197
I V P
Sbjct: 182 GIGVYEVRP 190
|
Length = 256 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 84.1 bits (208), Expect = 6e-19
Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 6/188 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---GFVVSG 70
+L A VTGG GIG+ T LA GA V N E + G V+
Sbjct: 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA- 469
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D + +V + G ++I+VNN G P E + +E+ +
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGG-VDIVVNNAGIATSSPFEETTLQEWQLNLDILATGY 528
Query: 131 YHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ + + + ++ G+ G+IVFI+S + + S Y A KAA L R LA E
Sbjct: 529 FLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYG 588
Query: 190 IRTNSVAP 197
IR N+V P
Sbjct: 589 IRVNTVNP 596
|
Length = 676 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 81.8 bits (202), Expect = 7e-19
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-----FVVSG 70
+VTGG+RGIG+ V GA V C+R E E G FV
Sbjct: 8 ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFV--- 64
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFES 129
CD + + LI +F G+++ LVNN G + + T E SA+E+ ++ N S
Sbjct: 65 -PCDVTKEEDIKTLISVTVERF-GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLIS 122
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ + P L+ S G+I+ +SS+ G + Y ATK A+ +T+ LA + ++
Sbjct: 123 YFLASKYALPHLRKSQ-GNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYG 181
Query: 190 IRTNSVAPWYTKTSLVE 206
+R N ++P T L E
Sbjct: 182 VRVNCISPGNIWTPLWE 198
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 1e-18
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+K T LVTG RGIG+A VE L GA V+ R+ + ++ K + V
Sbjct: 1 IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI-MTTNFESTYH 132
D S I+ ++ +++++NN G +E A E K M N
Sbjct: 61 DPES-------IKAAAAQAK-DVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLR 112
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L Q P+LKA+G G+IV ++SV L + + Y A+K+A LT+ L E A
Sbjct: 113 LAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLV 172
Query: 193 NSVAP 197
SV P
Sbjct: 173 LSVHP 177
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 1e-18
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 4/187 (2%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
+TG GIG+AT A G V NE L E + G +G++ D
Sbjct: 5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGA-GNAWTGAL-DVTDRAA 62
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
+ + + + G+L++L NN G P + E + +++ N + + P
Sbjct: 63 WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY 122
Query: 141 LKASGVGSIVF-ISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY 199
LKA+ G+ V SS + ++Y ATK A+ LT L EW + IR V P +
Sbjct: 123 LKAT-PGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLF 181
Query: 200 TKTSLVE 206
T++++
Sbjct: 182 VDTAMLD 188
|
Length = 260 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 2e-18
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 21/203 (10%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
KG+ A+VTGG G+G ATVE L GA V K V V
Sbjct: 1 KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKL-GDNCRFVPVDVTSE 59
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNI------RKPTIEYSAEEYSKIMTTNFES 129
+ + +KF G+L+I+VN G + +K +S E + +++ N
Sbjct: 60 ---KDVKAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIG 115
Query: 130 TYHLCQLVYPLLKAS--------GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
T+++ +L + + GV I+ +SV + Y A+K + +T +
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGV--IINTASVAAFEGQIGQAAYSASKGGIVGMTLPI 173
Query: 182 ACEWAKDNIRTNSVAPWYTKTSL 204
A + A IR ++AP T L
Sbjct: 174 ARDLAPQGIRVVTIAPGLFDTPL 196
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 3e-18
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 20/200 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGFVVSGSVC 73
A+VTG +RGIG+A ELA G + + + + + L G
Sbjct: 3 VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAA----GRRAIYFQA 58
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
D E L+ + F G+L+ LVNN G +R ++ + + + +++ N +
Sbjct: 59 DIGELSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPF 117
Query: 132 HLCQLV------YPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACE 184
L Q V P SI+F++S+ L G Y +KA ++ TR LA
Sbjct: 118 FLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGE-YCISKAGLSMATRLLAYR 176
Query: 185 WAKDNIRTNSVAPWYTKTSL 204
A + I + + P T +
Sbjct: 177 LADEGIAVHEIRPGLIHTDM 196
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 3e-18
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVS 69
L+G ++TGG+ G+G+A A VV +E E N +E + G V
Sbjct: 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
G D LIQ +F G L++++NN G P+ E S E+++K++ TN
Sbjct: 64 G---DVTVESDVVNLIQTAVKEF-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTG 119
Query: 130 TYHLCQ--LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ + + Y ++ G+I+ +SSV Y A+K + +T LA E+A
Sbjct: 120 AFLGSREAIKY-FVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAP 178
Query: 188 DNIRTNSVAP 197
IR N++ P
Sbjct: 179 KGIRVNNIGP 188
|
Length = 261 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 8e-18
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 1/168 (0%)
Query: 22 VTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81
+TG + GIG+AT A GA V +R+ L++ +E + G V D A Q
Sbjct: 5 ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64
Query: 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL 141
E+ +F G+++ VNN G + + + EE+ ++ N+ + P L
Sbjct: 65 ERAADTAVERF-GRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123
Query: 142 KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ G G+++ + S+ G + Y A+K A+ T +L E A D
Sbjct: 124 RRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDG 171
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 2e-17
Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 7/189 (3%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS---KGFVVSGSVCDAAS 77
++TG G+G+A A G + NE + LK + GF CD
Sbjct: 4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQR---CDVRD 60
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
Q L Q K+ G ++++VNN G E S E++ + N C+
Sbjct: 61 YSQLTALAQACEEKWGG-IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAF 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
PL K G IV I+S+ GL + S Y KA + L+ L E A D I + V P
Sbjct: 120 LPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179
Query: 198 WYTKTSLVE 206
+ +T+L++
Sbjct: 180 SFFQTNLLD 188
|
Length = 270 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 3e-17
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 5/184 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G AL+TG GIG+A E GA V E VS V
Sbjct: 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D ++++ +F G ++IL NN P ++ S + Y ++ N + + L
Sbjct: 64 Q---DSIDRIVAAAVERF-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLM 119
Query: 135 QLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q V + G G I+ ++S G S Y ATKAA+ T++ A + I N
Sbjct: 120 QAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVN 179
Query: 194 SVAP 197
++AP
Sbjct: 180 AIAP 183
|
Length = 257 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 3e-17
Identities = 57/196 (29%), Positives = 86/196 (43%), Gaps = 5/196 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK TA+VTGG GIG AT A GA V N K + ++KG CD
Sbjct: 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D + + G +++LVNN G + P + + +++ N H+
Sbjct: 61 ITDRDSVDTAVAAAEQAL-GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMH 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRT 192
V P + G G IV I+S VGS ++Y A K + ++ +A E A+ I
Sbjct: 120 HAVLPGMVERGAGRIVNIASDAA--RVGSSGEAVYAACKGGLVAFSKTMAREHARHGITV 177
Query: 193 NSVAPWYTKTSLVERV 208
N V P T T+L++ +
Sbjct: 178 NVVCPGPTDTALLDDI 193
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 3e-17
Identities = 52/192 (27%), Positives = 78/192 (40%), Gaps = 11/192 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
LVTG +RG+G A A GA VV R+ E + + V D
Sbjct: 2 VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRD--- 58
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNV------GTNIRKPTIEYSAEEYSKIMTTNFESTY 131
DQ + +I+E + F G ++ +VNN + RK E+Y + + +
Sbjct: 59 RDQVQAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+L Q V P K G G ++ I + + V Y KAA+ TRN+A E I
Sbjct: 118 NLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGIT 177
Query: 192 TNSVAPWYTKTS 203
N V+ K +
Sbjct: 178 VNMVSGGLLKVT 189
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 5e-17
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Query: 22 VTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81
+TG GIG+ T A G V +E L L VV+G++ D
Sbjct: 5 ITGAASGIGRETALLFARNGWFVGLYDIDEDGL-AALAAELGAENVVAGAL-DVTDRAAW 62
Query: 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL 141
+ + + G+L+ L NN G P + + +++ N + + P L
Sbjct: 63 AAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPYL 122
Query: 142 KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201
KA+ ++ +S + ++Y ATK A+ LT L EWA+ IR V PW+
Sbjct: 123 KATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVD 182
Query: 202 TSLVE 206
T ++
Sbjct: 183 TPILT 187
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 5e-17
Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 8/197 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVC 73
L G L+TG ++GIG A E A G +H +R+ L + ++ V V+
Sbjct: 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D +SP+ RE+L E G ++ILVNN G + + L
Sbjct: 65 DLSSPEAREQLAAEAGD-----IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDL 119
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT-KAAMNQLTRNLACEWAKDNIRT 192
+L YP +KA G G IV + G + + I G+ AA+ TR L + D +R
Sbjct: 120 TRLAYPRMKARGSGVIVNVIGAAG-ENPDADYICGSAGNAALMAFTRALGGKSLDDGVRV 178
Query: 193 NSVAPWYTKTSLVERVM 209
V P T + ++
Sbjct: 179 VGVNPGPVATDRMLTLL 195
|
Length = 259 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 8e-17
Identities = 67/218 (30%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 3 NAESSFKSSRWS--LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---VELNKC 57
SS SS S L G ALVTGG GIG++ V GA V + +
Sbjct: 2 ATASSSASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDS 61
Query: 58 LKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG------TNIRKPT 111
L + F CD D + + KF G L+I+VNN G +IR
Sbjct: 62 LGGEPNVCFFH----CDVTVEDDVSRAVDFTVDKF-GTLDIMVNNAGLTGPPCPDIRN-- 114
Query: 112 IEYSAEEYSKIMTTN----FESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSI 166
E+ K+ N F H +++ PL K GSIV + SV + +G +
Sbjct: 115 --VELSEFEKVFDVNVKGVFLGMKHAARIMIPLKK----GSIVSLCSVASAIGGLGPHA- 167
Query: 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204
Y +K A+ LTR++A E K IR N V+P+ T+L
Sbjct: 168 YTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL 205
|
Length = 280 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 76.1 bits (187), Expect = 9e-17
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TAL+TG RGIG+A + GA V N E +S V D
Sbjct: 1 LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
AS D+ + + ++ G ++ILVNN P ++ + E Y ++ N T +
Sbjct: 61 QASIDR---CVAALVDRW-GSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMM 116
Query: 135 QLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q V + A G G I+ ++S G +Y ATKAA+ LT++ + I N
Sbjct: 117 QAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 176
Query: 194 SVAP 197
++AP
Sbjct: 177 AIAP 180
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 9e-17
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK ++TGG +G+G+A E LA GA + N+ +L + + E + G V G +
Sbjct: 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR----------KPTIEYSAEEYSKIMT 124
+ E ++ F G+LN L+NN G +R K T + S E++ ++
Sbjct: 63 VTDEEDVEATFAQIAEDF-GQLNGLINNAGI-LRDGLLVKAKDGKVTSKMSLEQFQSVID 120
Query: 125 TNFESTYHLC--QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
N + LC + ++++ G I+ ISS+ ++G + Y A+KA + +T A
Sbjct: 121 VNLTGVF-LCGREAAAKMIESGSKGVIINISSIARAGNMGQ-TNYSASKAGVAAMTVTWA 178
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVE 206
E A+ IR ++AP +T +
Sbjct: 179 KELARYGIRVAAIAPGVIETEMTA 202
|
Length = 253 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 1e-16
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 7/195 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-C 73
LK LVTG GIG+ A GA V R E +L E ++ G +
Sbjct: 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPL 69
Query: 74 D--AASPDQREKLIQEVGSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFEST 130
D A+P ++L + +F G+L+ +++N G P + E + +M N +T
Sbjct: 70 DLLTATPQNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNAT 128
Query: 131 YHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ L Q + PLL S S+VF SS VG G+ Y +K A + + LA E+ N
Sbjct: 129 FMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGA-YAVSKFATEGMMQVLADEYQGTN 187
Query: 190 IRTNSVAPWYTKTSL 204
+R N + P T+T++
Sbjct: 188 LRVNCINPGGTRTAM 202
|
Length = 247 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 75.8 bits (187), Expect = 1e-16
Identities = 51/177 (28%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
+TG +RG G+A E G V +R+ L +++ + ++ V D A+
Sbjct: 7 FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFA 66
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
++ F G+L+I+VNN G + E + E + TNF + Q V P
Sbjct: 67 ---AVETAVEHF-GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122
Query: 141 LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
L+ G I+ ISS+GG+S IY A+K A+ ++ LA E A+ I+ V P
Sbjct: 123 LREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEP 179
|
Length = 275 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 2e-16
Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 13/197 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A++TGG GIG AT LA GA V + E K + FV D
Sbjct: 5 LAGRVAVITGGGSGIGLATARRLAAEGATV-VVGDIDPEAGKAAADEVGGLFV----PTD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNFEST 130
D L + G ++I NN G I P + + + ++ N S
Sbjct: 60 VTDEDAVNALFDTAAETY-GSVDIAFNNAG--ISPPEDDSILNTGLDAWQRVQDVNLTSV 116
Query: 131 YHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
Y C+ P + G GSI+ +S V + S Y A+K + ++R L ++A+
Sbjct: 117 YLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQG 176
Query: 190 IRTNSVAPWYTKTSLVE 206
IR N++ P T L++
Sbjct: 177 IRVNALCPGPVNTPLLQ 193
|
Length = 255 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 3e-16
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKC---LKEWQSKGFVVSGSVC 73
ALVTG + IG+A E LA G VVH +R+E E + L ++ +V +
Sbjct: 2 VALVTGAAKRIGRAIAEALAAEGYRVVVH-YNRSEAEAQRLKDELNALRNSAVLVQADLS 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A+ L+ F G+ ++LVNN P + S + ++++ N ++ Y L
Sbjct: 61 DFAA---CADLVAAAFRAF-GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLL 116
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRT 192
Q L S GSI+ I +G Y +KAA+ LTR+ A E A NIR
Sbjct: 117 IQAFARRLAGSRNGSIINI-IDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NIRV 174
Query: 193 NSVAP 197
N +AP
Sbjct: 175 NGIAP 179
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 4e-16
Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV--VSG 70
L G LVT GT GIG AT GA V +E L + E ++ + V
Sbjct: 15 LAGKVVLVTAAAGT-GIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEA 73
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
VCD S Q + LI + G+L++LVNN G + P ++ + +E+S+++ T
Sbjct: 74 VVCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGT 132
Query: 131 YHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ + ++A G G IV +SV G + Y A KA + LTR A E A+
Sbjct: 133 FRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYG 192
Query: 190 IRTNSVAP 197
+R N+VAP
Sbjct: 193 VRINAVAP 200
|
Length = 262 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 4e-16
Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV-----HTCSRNEVELNKCLKEWQSKGFVVS 69
L+G AL+TG GIG+AT A GA + ++ E+ + ++ K +
Sbjct: 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALP 112
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFE 128
G + D A Q L++ + G L+ILVN G K + + E++ TN
Sbjct: 113 GDLKDEAFCRQ---LVERAVKELGG-LDILVNIAGKQTAVKDIADITTEQFDATFKTNVY 168
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWA 186
+ + LC+ P L SI+ S+ S+ S ++ Y +TKAA+ T+ LA + A
Sbjct: 169 AMFWLCKAAIPHLPPGA--SIINTGSIQ--SYQPSPTLLDYASTKAAIVAFTKALAKQVA 224
Query: 187 KDNIRTNSVAP 197
+ IR N+VAP
Sbjct: 225 EKGIRVNAVAP 235
|
Length = 300 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 4e-16
Identities = 53/202 (26%), Positives = 79/202 (39%), Gaps = 14/202 (6%)
Query: 14 SLKGMTALVTGGTR--GIGQATVEELAGLGAVV--HTCSRNEVELNKCL---------KE 60
L ALVTG +R GIG A LA G + S + + + +E
Sbjct: 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
+S G D + P ++ V + G +IL+NN + E +AE+
Sbjct: 62 IESYGVRCEHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLD 120
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
K N +T L G I+ ++S L + Y ATK A+ T++
Sbjct: 121 KHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKS 180
Query: 181 LACEWAKDNIRTNSVAPWYTKT 202
LA E A+ I N+V P T T
Sbjct: 181 LAPELAEKGITVNAVNPGPTDT 202
|
Length = 256 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 7e-16
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKEWQSK 64
G LVTG G+G+A A GA V ++ +K + E ++
Sbjct: 2 RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61
Query: 65 GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT 124
G +V + S + EK+++ F G+++ILVNN G + + S E++ +M
Sbjct: 62 G---GKAVANYDSVEDGEKIVKTAIDAF-GRVDILVNNAGILRDRSFAKMSEEDWDLVMR 117
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLAC 183
+ + ++ + + +P ++ G I+ SS GL + G + Y A K + L+ LA
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQAN-YSAAKLGLLGLSNTLAI 176
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERVMFSNLS 214
E AK NI N++AP + + E VM +L
Sbjct: 177 EGAKYNITCNTIAP-AAGSRMTETVMPEDLF 206
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.0 bits (179), Expect = 1e-15
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 10/194 (5%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
+ L G A++TG G+GQ LA GA +V E ++ K ++
Sbjct: 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITAD 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
+ + ++ + + G ++IL+NN G R+ +E+ +++ ++ N ++ +
Sbjct: 64 LIQQ---KDIDSIVSQ-AVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVF 119
Query: 132 HLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKD 188
L Q V G G I+ I+S+ LS G + Y A+K+A+ LTR LA E ++
Sbjct: 120 FLSQAVAKQFVKQGNGGKIINIASM--LSFQGGIRVPSYTASKSAVMGLTRALATELSQY 177
Query: 189 NIRTNSVAPWYTKT 202
NI N++AP Y T
Sbjct: 178 NINVNAIAPGYMAT 191
|
Length = 251 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 2e-15
Identities = 53/189 (28%), Positives = 78/189 (41%), Gaps = 20/189 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
T LVTG T+GIG A LA LG V +R+ ++ F CD A
Sbjct: 5 TVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----------DFPGELFACDLADI 53
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+Q + ++ ++ +VNNVG + +P + + N + + Q
Sbjct: 54 EQTAATLAQINEIH--PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111
Query: 139 PLLKASGVGSIVFISS---VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
+K G IV I S G L + Y A K+A+ TR A E A+ I N+V
Sbjct: 112 EGMKLREQGRIVNICSRAIFGALDR----TSYSAAKSALVGCTRTWALELAEYGITVNAV 167
Query: 196 APWYTKTSL 204
AP +T L
Sbjct: 168 APGPIETEL 176
|
Length = 234 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 72.1 bits (177), Expect = 2e-15
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 13/189 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVC 73
LKG LVTGG G+G+A V+ GA V ++ L+E ++ G V G
Sbjct: 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEG 58
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNFE 128
D S D ++ + + F GK++ L+ N G T + + E + ++ N +
Sbjct: 59 DVRSLDDHKEAVARCVAAF-GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVK 117
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ P L AS GS++F S G G G +Y A K A+ L + LA E A
Sbjct: 118 GYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAP- 175
Query: 189 NIRTNSVAP 197
+R N VAP
Sbjct: 176 YVRVNGVAP 184
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 4e-15
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+G +TGG RGIG AT LA LGA V +E + E G VV G +
Sbjct: 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---GLVVGGPL- 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D P + V + G +++LVNN G P ++ +I+ N
Sbjct: 58 DVTDPASFAAFLDAVEADL-GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILG 116
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+L P + G G +V ++S+ G V + Y A+K A+ T E + +
Sbjct: 117 SKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVS 176
Query: 194 SVAPWYTKTSLV 205
V P + T L+
Sbjct: 177 VVLPSFVNTELI 188
|
Length = 273 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 4e-15
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 2/190 (1%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G +VTG GIG+ T A GA V +E + + ++ G V D +
Sbjct: 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVS 374
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
D E + V ++ G +I+VNN G + ++ SAE++ +++ N H C+L
Sbjct: 375 DADAMEAFAEWVRAEH-GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRL 433
Query: 137 VYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
+ G G IV ++S + S Y +KAA+ L+ L E A I ++
Sbjct: 434 FGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAI 493
Query: 196 APWYTKTSLV 205
P + T++V
Sbjct: 494 CPGFVDTNIV 503
|
Length = 582 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.5 bits (175), Expect = 4e-15
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 7/197 (3%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G A++TGG GIG AT E A GA V ++ L + + +++GF V G +CD
Sbjct: 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
++ L E + G ++++ +N G + P +E + +++ ++ + + H +
Sbjct: 66 HREEVTHLADE-AFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEA 124
Query: 137 VYP-LLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
P LL+ G +VF +S GL + G G+ YG K + L LA E D I +
Sbjct: 125 FLPRLLEQGTGGHVVFTASFAGLVPNAGLGA-YGVAKYGVVGLAETLAREVTADGIGVSV 183
Query: 195 VAPWYTKTSLV---ERV 208
+ P +T+LV ER+
Sbjct: 184 LCPMVVETNLVANSERI 200
|
Length = 275 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 5e-15
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 7/184 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG + G + G+G A GA V SRNE +L K +K+ SK + V D
Sbjct: 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSKYGNIHYVVGD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+S + +I++ N ++ LV VG + E+S E +++T + + +
Sbjct: 62 VSSTESARNVIEKAAKVLNA-IDGLVVTVGGYVEDTVEEFSGLE--EMLTNHIKIPLYAV 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIRTN 193
LK SIV +SS+ G+ + Y KA + + LA E IR N
Sbjct: 119 NASLRFLKEG--SSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVN 176
Query: 194 SVAP 197
+AP
Sbjct: 177 GIAP 180
|
Length = 238 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 71.1 bits (174), Expect = 5e-15
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 21 LVTGGTRGIGQATVEELA--GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
LVTG +RGIG+A LA G VH + + Q++G D A
Sbjct: 2 LVTGASRGIGRAIANRLAADGFEICVH-YHSGRSDAESVVSAIQAQGGNARLLQFDVADR 60
Query: 79 DQ-REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ-L 136
R L ++ +G +V N G S E++ ++ TN + Y++
Sbjct: 61 VACRTLLEADIAE--HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPC 118
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
P+++A G I+ ++SV G+ Y A KA + T+ LA E AK I N +A
Sbjct: 119 TMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIA 178
Query: 197 PWYTKTSLVERV 208
P T ++ V
Sbjct: 179 PGLIDTEMLAEV 190
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 70.9 bits (174), Expect = 6e-15
Identities = 49/184 (26%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
++TGG+ G+G+A + A GA V R + +L + E + V D
Sbjct: 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+P+ +K+++++ KF G+++ L+NN N P + S ++ ++ T++ Q
Sbjct: 61 NPEDVQKMVEQIDEKF-GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQA 119
Query: 137 VYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGAT-KAAMNQLTRNLACEWAKD-NIRTN 193
V G+ G+I+ + + G G I+ A KA + +TR LA EW + IR N
Sbjct: 120 VGKYWIEKGIKGNIINMVATYAW-DAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVN 178
Query: 194 SVAP 197
++AP
Sbjct: 179 AIAP 182
|
Length = 252 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 6e-15
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 2/190 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
A VTGG GIG + + L G VV C N K L++ ++ GF S +
Sbjct: 6 AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW 65
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
D + +V ++ G++++LVNN G + + E+++ ++ TN S +++ + V
Sbjct: 66 DSTKAAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
+ G G I+ ISSV G + Y KA ++ T +LA E A + N+V+P
Sbjct: 125 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 184
Query: 199 YTKTSLVERV 208
Y T +V+ +
Sbjct: 185 YIGTDMVKAI 194
|
Length = 246 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 6e-15
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 16/195 (8%)
Query: 24 GGTRGIGQATVEELAGLGAVV----HTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
I A + A GA V + +++ KE + V+ D S +
Sbjct: 3 ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPAD--VI---PLDVTSDE 57
Query: 80 QREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
++L ++V GK++ LV+++ KP ++ S E + K + + S L +
Sbjct: 58 DIDELFEKVKEDG-GKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAK 116
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
PL+ G SIV +S + G KAA+ L R LA E + IR N++
Sbjct: 117 AAKPLMNEGG--SIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTI 174
Query: 196 APWYTKTSLVERVMF 210
+ TKT+ +
Sbjct: 175 SAGPTKTTAGSGIGG 189
|
Length = 239 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 67.6 bits (165), Expect = 1e-13
Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 15/196 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVV----HTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
ALVTGG+RGIG+AT LA G V E+ + + K FV+ + D
Sbjct: 3 IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYHL 133
I + L LVNN G + T+E +AE +++++TN + Y L
Sbjct: 63 ENQVVAMFTAIDQHD----EPLAALVNNAGILFTQCTVENLTAERINRVLSTNV-TGYFL 117
Query: 134 C--QLVYPLLKASGV--GSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
C + V + G G+IV +SS L G Y A+K A++ LT L+ E A
Sbjct: 118 CCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQ 177
Query: 189 NIRTNSVAPWYTKTSL 204
IR N V P + T +
Sbjct: 178 GIRVNCVRPGFIYTEM 193
|
Length = 247 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 1e-13
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 20 ALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
++TG +RGIG AT A G AV RN ++ + +G D A
Sbjct: 5 MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE 64
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-SAEEYSKIMTTNFESTYHLC--Q 135
+L + V + G+L+ LVNN G + +E A ++I TN ++ LC +
Sbjct: 65 ADVLRLFEAVDREL-GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSF-LCARE 122
Query: 136 LVYPLLKASGV--GSIVFISSVGGLSHVGSGS---IYGATKAAMNQLTRNLACEWAKDNI 190
V + G G+IV +SS+ + +GS Y A+K A++ +T LA E A + I
Sbjct: 123 AVKRMSTRHGGRGGAIVNVSSMA--ARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGI 180
Query: 191 RTNSVAP 197
R N+V P
Sbjct: 181 RVNAVRP 187
|
Length = 248 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 1e-13
Identities = 51/198 (25%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L T LVTG ++G+G+ + A GA V +R++ +L K V +G
Sbjct: 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDA-----IVEAGHPE 57
Query: 74 DAASP--------DQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYS 120
A + E+ + GKL+ +V+ G + + T+ +Y
Sbjct: 58 PFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQY- 116
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+I T + L + ++PLLK S S++F+ G + +GA+KAA+N L +
Sbjct: 117 RINTV---APMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKV 173
Query: 181 LACEWAK-DNIRTNSVAP 197
A EW + N+R N + P
Sbjct: 174 AADEWERFGNLRANVLVP 191
|
Length = 239 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 2e-13
Identities = 52/192 (27%), Positives = 79/192 (41%), Gaps = 14/192 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G LV GG+RGIG A V GA V T + ++ + +E +G+
Sbjct: 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE--------TGATA 55
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
R+ +I V G L+ILV N G + +E A++ ++ N + YH
Sbjct: 56 VQTDSADRDAVIDVVRKS--GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHA 113
Query: 134 CQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
V + G I+ I SV G V + Y A+K+A+ + R LA ++ I
Sbjct: 114 S--VEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITI 171
Query: 193 NSVAPWYTKTSL 204
N V P T
Sbjct: 172 NVVQPGPIDTDA 183
|
Length = 237 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.6 bits (162), Expect = 2e-13
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV--HTCSRNEVELNKCLKEWQSKGFVVSGSV 72
LKG ALVTG +RGIG+A + LA GA+V H +R E E + + E QS G
Sbjct: 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIG 60
Query: 73 CDAASPDQREKLIQEVGSKFNG-----KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
+ S E L + ++ K +IL+NN G E + + + ++++ N
Sbjct: 61 ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNA 120
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
++ + + Q L+ + I+ ISS + Y TK A+N +T LA +
Sbjct: 121 KAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 178
Query: 188 DNIRTNSVAPWYTKTSL 204
I N++ P + KT +
Sbjct: 179 RGITVNAILPGFIKTDM 195
|
Length = 252 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 2e-13
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ALVTG + GIG+ L GA+V +L E + + ++ D
Sbjct: 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D+ + L Q+ + G ++ILVNN G + S E++ ++ N +T+ L
Sbjct: 64 R---DEVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLT 119
Query: 135 -QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+L +P+++ G I+ I+SV G++ + Y A+KA M +++LA E A N+ N
Sbjct: 120 RELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVN 178
Query: 194 SVAPWYTKTSLVERV 208
VAP + ++++ ++
Sbjct: 179 CVAPGFIESAMTGKL 193
|
Length = 245 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 3e-13
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 35/202 (17%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCS-RNEVELNKCLKEWQSKGFVVS 69
SLKG L+ GG + +G +LA GA +H S ++ + + + ++ G
Sbjct: 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV 64
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D + EKL + + F G+ +I +N VG ++KP +E S EY ++ N +S
Sbjct: 65 AFQADLTTAAAVEKLFDDAKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKS 123
Query: 130 TY--------------HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175
+ + LV LL A S Y +KA +
Sbjct: 124 AFFFIKEAGRHLNDNGKIVTLVTSLLGA----------------FTPFYSAYAGSKAPVE 167
Query: 176 QLTRNLACEWAKDNIRTNSVAP 197
TR + E+ I +V P
Sbjct: 168 HFTRAASKEFGARGISVTAVGP 189
|
Length = 257 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 3e-13
Identities = 49/186 (26%), Positives = 75/186 (40%), Gaps = 12/186 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
T LVTGG+RG+G A A GA VV ++E E + + V D
Sbjct: 7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDRE- 65
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNV-------GTNIRKPTIEYSAEEYSKIMTTNFEST 130
Q + + F + +VNN G RK + + E++ + + + +
Sbjct: 66 --QVQAMFATATEHFGKPITTVVNNALADFSFDGDA-RKKADDITWEDFQQQLEGSVKGA 122
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ Q P ++ G G I+ I + + V Y KAA+ LTRNLA E I
Sbjct: 123 LNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGI 182
Query: 191 RTNSVA 196
N V+
Sbjct: 183 TVNMVS 188
|
Length = 253 |
| >gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 3e-13
Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+ L+TG + GIG EL G V R ++ + S GF +G + D P
Sbjct: 4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSLGF--TGILLDLDDP 57
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ E+ EV + + +L L NN G + P S ++ + +TNF T+ L L+
Sbjct: 58 ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLL 117
Query: 139 PLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
P + G G IV SSV GL S G G+ Y A+K A+ + L E I+ + + P
Sbjct: 118 PAMLPHGEGRIVMTSSVMGLISTPGRGA-YAASKYALEAWSDALRMELRHSGIKVSLIEP 176
Query: 198 WYTKTSLVERV 208
+T + V
Sbjct: 177 GPIRTRFTDNV 187
|
Length = 256 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 4e-13
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 6/190 (3%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
ALVTG +GIG A + L G V NE + G D + D
Sbjct: 5 ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
Q +++V F G LN++VNN G P + E++ K+ N Q
Sbjct: 65 QVFAAVRQVVDTF-GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123
Query: 140 LLKASGVG-SIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
K G G I+ +S G VG+ ++Y +TK A+ LT+ A + A + I N+ A
Sbjct: 124 AFKKLGHGGKIINATSQAG--VVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYA 181
Query: 197 PWYTKTSLVE 206
P KT ++
Sbjct: 182 PGIVKTPMMF 191
|
Length = 256 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 5e-13
Identities = 59/189 (31%), Positives = 81/189 (42%), Gaps = 9/189 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG +V+G G+G+ A GA V +R L++ E G D
Sbjct: 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNN---VGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
DQ L+ +F G+++ LVNN V + KP + + ++ N T
Sbjct: 63 ITDEDQCANLVALALERF-GRVDALVNNAFRVPS--MKPLADADFAHWRAVIELNVLGTL 119
Query: 132 HLCQLVYPLLKASGVGSIVFI-SSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
L Q P L SG GSIV I S V S G+ Y K A+ +++LA E I
Sbjct: 120 RLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGA-YKMAKGALLAASQSLATELGPQGI 177
Query: 191 RTNSVAPWY 199
R NSVAP Y
Sbjct: 178 RVNSVAPGY 186
|
Length = 258 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 5e-13
Identities = 57/184 (30%), Positives = 80/184 (43%), Gaps = 7/184 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG + GIG+AT LA G V+ +R V+ + L +S V D AS
Sbjct: 5 VALVTGASSGIGKATARRLAAQGYTVYGAARR-VDKMEDLAS--LGVHPLSLDVTDEASI 61
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
I G++++LVNN G + +E + N L QLV
Sbjct: 62 KAAVDTII----AEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++A G I+ ISS+GG + G+ Y ATK A+ + L E A I + P
Sbjct: 118 PHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPG 177
Query: 199 YTKT 202
KT
Sbjct: 178 GIKT 181
|
Length = 273 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 1e-12
Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 10/188 (5%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS--GSVC 73
A+V GG + +G LA G V N + +E ++ G
Sbjct: 1 MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
DA S L + V F G++++LV N G ++ ++ + + N Y L
Sbjct: 61 DATSEQSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNL-VGYFL 118
Query: 134 C--QLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDN 189
C + +++ G I+ I+S G VGS S Y A K LT++LA + A+
Sbjct: 119 CAREFSRLMIRDGIQGRIIQINSKSG--KVGSKHNSGYSAAKFGGVGLTQSLALDLAEYG 176
Query: 190 IRTNSVAP 197
I +S+
Sbjct: 177 ITVHSLML 184
|
Length = 259 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 1e-12
Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAA 76
TAL+TG +RGIG A ELA + R L++ E F V D
Sbjct: 4 PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPGATPFPV-----DLT 57
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
P+ ++++ G+L++LV+N G P E + +E+ + N + L +L
Sbjct: 58 DPEAIAAAVEQL-----GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRL 112
Query: 137 VYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
+ P L+A+ G +VFI+S GL ++ G GS Y A+K A+ L L E N+R SV
Sbjct: 113 LLPALRAAH-GHVVFINSGAGLRANPGWGS-YAASKFALRALADALREEEP-GNVRVTSV 169
Query: 196 APWYTKTSLVERVM 209
P T T + ++
Sbjct: 170 HPGRTDTDMQRGLV 183
|
Length = 227 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 1e-12
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 13/199 (6%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-----SRNEVELNKCLK 59
E ++ S LK ALVTGG GIG+A A GA V + ++ K ++
Sbjct: 38 EKTYVGSG-RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIE 96
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-EYSAEE 118
E K ++ G + D L+ E G L+I+ G + P I + ++E+
Sbjct: 97 ECGRKAVLLPGDLSDEKFA---RSLVHEAHKALGG-LDIMALVAGKQVAIPDIADLTSEQ 152
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
+ K N + + L Q PLL SI+ SS+ Y ATKAA+ +
Sbjct: 153 FQKTFAINVFALFWLTQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYS 210
Query: 179 RNLACEWAKDNIRTNSVAP 197
R LA + A+ IR N VAP
Sbjct: 211 RGLAKQVAEKGIRVNIVAP 229
|
Length = 294 |
| >gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 1e-12
Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 27/211 (12%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVV----HTCSRNEVELNKCLKEWQSKGFVVS 69
L G A+VTG G+G+A LA LGA V + + ++ ++ +K V+
Sbjct: 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVA 68
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM------ 123
G + A+ D+ +G L+I+VNN G + S EE+ ++
Sbjct: 69 GDISQRATADELVATAVGLGG-----LDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRG 123
Query: 124 ---TTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177
T + Y + KA+G G IV SS GL + YGA KA + L
Sbjct: 124 HFLLTRNAAAYWRAK-----AKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITAL 178
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208
T + A + +R N++ P +T++ V
Sbjct: 179 TLSAARALGRYGVRANAICP-RARTAMTADV 208
|
Length = 306 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.4 bits (157), Expect = 2e-12
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 6/200 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW--QSKGFVVSGS 71
S + T LVTGG GIG+ L GA V RN +L +E V
Sbjct: 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYE 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFEST 130
D DQ + + + ++G+L+ +V+ G + P + ++ + + + N T
Sbjct: 64 PADVTDEDQVARAVDAATA-WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGT 122
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
++ + L G GS V ISS+ +H G+ YG TK+A++ L + A E
Sbjct: 123 MYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGA-YGVTKSAVDHLMKLAADELGPSW 181
Query: 190 IRTNSVAPWYTKTSLVERVM 209
+R NS+ P +T LV +
Sbjct: 182 VRVNSIRPGLIRTDLVAPIT 201
|
Length = 276 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC-DAA 76
VTG GIG+AT LA GA + R+ L + + + ++ G V D +
Sbjct: 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ- 135
D ++ + G +++++N G + + E++ +++ N H+ +
Sbjct: 61 DYDAVAAFAADIHAAH-GSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIET 119
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
V P++ A G +V +SS GL + + Y A+K + L+ L + A+ I + V
Sbjct: 120 FVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVV 179
Query: 196 APWYTKTSLVERV 208
P KT LV V
Sbjct: 180 VPGAVKTPLVNTV 192
|
Length = 272 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 2e-12
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 8/179 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
L+TG + GIG+A + G V +R ++ + + GF + D
Sbjct: 3 VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV----EALAAAGF--TAVQLDVNDG 56
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+L +E+ ++ +G L++L+NN G P ++ E + TN + + + ++
Sbjct: 57 AALARLAEELEAE-HGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
PLL+ S G +V I SV G+ Y A+KAA++ L+ L E A ++ V P
Sbjct: 116 PLLRRSR-GLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQP 173
|
Length = 274 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 4e-12
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 7/173 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G A++TG G G A A LG + + L++ + E +++G V G D
Sbjct: 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ Q E L +F G +++L NN G E S ++ ++ N H
Sbjct: 64 VSDAAQVEALADAALERF-GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGV 122
Query: 135 QLVYPLLKASG------VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ PL+ A+ G IV +S+ GL + IY +K A+ LT L
Sbjct: 123 RAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETL 175
|
Length = 287 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 6e-12
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV- 72
LKG T L+TG IG A V+ + G +V ++ LN+ L+ + S+
Sbjct: 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLV 60
Query: 73 -CDAASPDQREKLIQEVGSKFNGKLNILVNNV---GTNIRKPTIEYSAEEYSKIMTTNFE 128
D + E+ + + K+ GK++ VN + K + S +++++ ++ +
Sbjct: 61 ELDITDQESLEEFLSKSAEKY-GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLG 119
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLS----HVGSGSI------YGATKAAMNQLT 178
S++ Q K G G++V ISS+ G+ + G+ Y A KA + LT
Sbjct: 120 SSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLT 179
Query: 179 RNLACEWAKDNIRTNSVAP 197
+ LA + NIR N V+P
Sbjct: 180 KYLAKYFKDSNIRVNCVSP 198
|
Length = 256 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 7e-12
Identities = 43/190 (22%), Positives = 70/190 (36%), Gaps = 21/190 (11%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
++TG + G+G+AT A GA V +R E L E ++ G V D A
Sbjct: 10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ + + G ++ VNN + P + + EE+ ++ + H
Sbjct: 70 EAVQAAADRAEEEL-GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAAL 128
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSG---------SIYGATKAAMNQLTRNLACEWAKD- 188
++ G+I+ VGS S Y A K A+ T +L CE D
Sbjct: 129 RHMRPRDRGAII---------QVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDG 179
Query: 189 -NIRTNSVAP 197
+ V P
Sbjct: 180 SPVSVTMVQP 189
|
Length = 334 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 8e-12
Identities = 47/187 (25%), Positives = 69/187 (36%), Gaps = 18/187 (9%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
LV GG+ GIG A A GA V SR+ L + V + ++ D
Sbjct: 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAAL-DITDEAA 59
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
+ E G + +V P M + F Y +
Sbjct: 60 VDAFFAEAGP-----FDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVA------ 108
Query: 141 LKASGV---GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+A+ + GS+ F+S + SG + GA AA+ L R LA E A +R N+V+P
Sbjct: 109 -RAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSP 165
Query: 198 WYTKTSL 204
T L
Sbjct: 166 GLVDTPL 172
|
Length = 230 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 1e-11
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 19/201 (9%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAV---VHTCSRNEVELNKCLKEWQSKGFVVSGS---- 71
L+TG + GIG LA + V+ R+ L K + W++ G + G+
Sbjct: 2 VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRD---LKKKGRLWEAAGALAGGTLETL 58
Query: 72 ---VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
VCD+ S + + E +++LV N G + P S + + + N
Sbjct: 59 QLDVCDSKSVAAAVERVTE------RHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVF 112
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
T + Q P +K G G I+ SSVGGL + +Y A+K A+ L +LA +
Sbjct: 113 GTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPF 172
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
N+ + + T+ +E+V+
Sbjct: 173 NVHLSLIECGPVHTAFMEKVL 193
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 1e-11
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 9/190 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
+KG T +++GGTRGIG+A V E A G + T + N E NK ++ + K G
Sbjct: 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK------PTIEYSAEEYSKIMTTN 126
+ P+ ++L +++ F+ +++ ++N + R + + + I T
Sbjct: 66 LNILEPETYKELFKKIDEDFD-RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTAT 124
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
+ Q ++ G GSI+ +SS G L ++ + + +G +KAA+ + + A E
Sbjct: 125 VNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELG 184
Query: 187 KDNIRTNSVA 196
+ NIR N+V+
Sbjct: 185 EKNIRVNAVS 194
|
Length = 260 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 1e-11
Identities = 61/205 (29%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 14 SLKGMTALVTGGTR--GIGQATVEELAGLGA-------------VVHTCSRNEVELNKCL 58
LK A+VTG +R GIG A +ELA GA + ++E +
Sbjct: 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQ-- 60
Query: 59 KEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE 118
+E G VS D D ++L+ +V + G +ILVNN + +AEE
Sbjct: 61 EELLKNGVKVSSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEE 119
Query: 119 YSKIMTTNFESTYHL-CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177
K N +T L Q K SG G I+ ++S + Y ATK A++ L
Sbjct: 120 LDKHYMVNVRATTLLSSQFARGFDKKSG-GRIINMTSGQFQGPMVGELAYAATKGAIDAL 178
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKT 202
T +LA E A I N++ P T T
Sbjct: 179 TSSLAAEVAHLGITVNAINPGPTDT 203
|
Length = 256 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 2e-11
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 12/190 (6%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---VELNKCLKEWQSKGFVVSGSVC 73
G A+VTGG GIG+ + G V +E + + F V G
Sbjct: 1 GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGP---NLFFVHG--- 54
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A + ++ + K G++++LVNN + EE+ +I++ N Y L
Sbjct: 55 DVADETLVKFVVYAMLEKL-GRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYEL 113
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ L + G I+ I+S Y A+K + LT LA D IR N
Sbjct: 114 SRYCRDELIKNK-GRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVN 171
Query: 194 SVAPWYTKTS 203
++P + T+
Sbjct: 172 CISPGWINTT 181
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 62.2 bits (152), Expect = 2e-11
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 38/200 (19%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTC---SRNEVELNKCLKEWQSKGFVVSGS 71
L G ALVTG RGIG A E LA GA V C L V G+
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHV-VCLDVPAAGEALAAVANR-------VGGT 259
Query: 72 --VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTI-EYSAEEYSKIMTTNF 127
D +PD ++ + + + G L+I+V+N G I R T+ + ++ N
Sbjct: 260 ALALDITAPDAPARIAEHLAERH-GGLDIVVHNAG--ITRDKTLANMDEARWDSVLAVNL 316
Query: 128 ESTYHLCQLVYPL-----LKASGV----GSIVFISSVGGLS-HVGSGSIYGATKAAMNQL 177
+ PL L A+G G IV +SS+ G++ + G + Y A+KA + L
Sbjct: 317 LA---------PLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQ-TNYAASKAGVIGL 366
Query: 178 TRNLACEWAKDNIRTNSVAP 197
+ LA A+ I N+VAP
Sbjct: 367 VQALAPLLAERGITINAVAP 386
|
Length = 450 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-11
Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 8/195 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
A+VTG + G G T ELA G +V RN E + L Q+ + ++
Sbjct: 5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNP-EKQENLLS-QATQLNLQQNI-KVQQL 61
Query: 79 D----QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D Q V + G++++LVNN G E EEY K TN +
Sbjct: 62 DVTDQNSIHNFQLVLKEI-GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVT 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
Q V P ++ G I+ ISS+ G S Y ++K A+ + +L E I
Sbjct: 121 QAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVAL 180
Query: 195 VAPWYTKTSLVERVM 209
+ P T++ E
Sbjct: 181 IEPGSYNTNIWEVGK 195
|
Length = 280 |
| >gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 3e-11
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNN-VGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
A S + E+L+ V G +++LV+N P S + + + L
Sbjct: 53 ALSEQKPEELVDAVLQAG-GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFAL 111
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q +K +G GSI+FI+S + S+YG +AA L +LA E ++DNI
Sbjct: 112 LQAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVY 171
Query: 194 SVAPWY 199
++ P +
Sbjct: 172 AIGPNF 177
|
Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 4e-11
Identities = 47/187 (25%), Positives = 75/187 (40%), Gaps = 5/187 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVCDA 75
L+ G T I +A A GA ++ +R+ L + + +++G V VS D
Sbjct: 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDI 60
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ + +I++ VGT + E + TNFE L
Sbjct: 61 LDTASHAAFLDSLP----ALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLT 116
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L+ +A G G+IV ISSV G S +YG+ KAA+ L K + +V
Sbjct: 117 LLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTV 176
Query: 196 APWYTKT 202
P + +T
Sbjct: 177 KPGFVRT 183
|
Length = 243 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 6e-11
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTG T G G+ G V R + L + E ++ V + A+
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAA 60
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
++ ++ + +++ +++LVNN G + +P + S E++ ++ TN + ++ +
Sbjct: 61 IEE---MLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V P + G I+ I S G G++YGATKA + Q + NL + +R +
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176
Query: 197 PWYTKTSLVERVMFSNL 213
P LV FSN+
Sbjct: 177 P-----GLVGGTEFSNV 188
|
Length = 248 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 1e-10
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 15/193 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDA 75
ALV G + GIG AT ELA G V +R + + + + ++ G V D
Sbjct: 12 PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP 71
Query: 76 ASPDQ-REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S + + +G + +LV+ G E S E++ + + L
Sbjct: 72 DSVKSFVAQAEEALGE-----IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLA 126
Query: 135 QLVYPLLKASGVGSIVFISSVGGL---SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
V P + G ++F+ S L H+G+ YGA KA + + NL E +R
Sbjct: 127 TAVLPGMIERRRGDLIFVGSDVALRQRPHMGA---YGAAKAGLEAMVTNLQMELEGTGVR 183
Query: 192 TNSVAPWYTKTSL 204
+ V P T T +
Sbjct: 184 ASIVHPGPTLTGM 196
|
Length = 274 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 3e-10
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L G TALVTG +RGIG T + LAG GA VV+ + NK + E ++ G S
Sbjct: 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAP-RANKVVAEIEAAGGRASAV 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + L+ +F G L+ LV N + E+Y+ M N ++
Sbjct: 62 GADLTDEESVAALMDTAREEF-GGLDALVLNASGGMESGM----DEDYA--MRLNRDAQR 114
Query: 132 HLCQLVYPLLKASGVGSIVFISS 154
+L + PL+ A +VF++S
Sbjct: 115 NLARAALPLMPAG--SRVVFVTS 135
|
Length = 248 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 3e-10
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 2/190 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ++TG + GIGQAT E A GA + +R+E L +E ++ G V
Sbjct: 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D DQ + L + S F G++++ VNNVG E E + +++ TN
Sbjct: 64 DVTDADQVKALATQAAS-FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRD 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD-NIRT 192
P+ K G G + + S+GG + + Y A+K + + L E A +I
Sbjct: 123 AHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHV 182
Query: 193 NSVAPWYTKT 202
V P + T
Sbjct: 183 CDVYPAFMDT 192
|
Length = 330 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 57.4 bits (139), Expect = 4e-10
Identities = 39/173 (22%), Positives = 65/173 (37%), Gaps = 2/173 (1%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK-CLKEWQSKGFVVSGSVCDAAS 77
A V G G+G A A G V +R E +L + + G DA
Sbjct: 1 VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D+ L + + G L +LV N G N+ P +E + + K+ + +
Sbjct: 61 EDEVIALFDLIEEEI-GPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ A G G+I+F + L + + K A+ L +++A E I
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGI 172
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 1e-09
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 13/203 (6%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCD 74
A+V GG + +G+ LA G V N K E ++ G G D
Sbjct: 1 MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A + L + V F ++++LV + G ++ ++ + + N Y LC
Sbjct: 61 ATNEQSVIALSKGVDEIFK-RVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVG-YFLC 118
Query: 135 --QLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDNI 190
+ +++ G I+ I+S G VGS S Y A K LT++LA + A+ I
Sbjct: 119 AREFSKLMIRDGIQGRIIQINSKSG--KVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGI 176
Query: 191 RTNSVAPWYTKTSLVERVMFSNL 213
NS+ +L++ MF +L
Sbjct: 177 TVNSLML----GNLLKSPMFQSL 195
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 56.5 bits (136), Expect = 1e-09
Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 34/178 (19%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTGG IG VE L G V R + FV V D
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRL---RDGLDPLLSGVEFV----VLDLTD 53
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D ++L + V +++ + + +A + ++ + N + T +L +
Sbjct: 54 RDLVDELAKGVPD-------AVIHLAA---QSSVPDSNASDPAEFLDVNVDGTLNLLE-- 101
Query: 138 YPLLKASGVGSIVFISSVGG-------------LSHVGSGSIYGATKAAMNQLTRNLA 182
+A+GV VF SSV L + YG +K A QL R A
Sbjct: 102 --AARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYA 157
|
Length = 314 |
| >gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 1e-09
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 21/189 (11%)
Query: 18 MTA--LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
M A L+TG + IG A L G V R + + G D
Sbjct: 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP---AIDGLRQAG--AQCIQADF 55
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ I E+ +G L +++N + KP A+ +++M + + Y L
Sbjct: 56 STNAGIMAFIDELKQHTDG-LRAIIHNASDWLAEKPGAPL-ADVLARMMQIHVNAPYLLN 113
Query: 135 QLVYPLLKASGVGS--IVFIS----SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ LL+ G + I+ I+ G H+ Y A+KAA++ +T + A + A
Sbjct: 114 LALEDLLRGHGHAASDIIHITDYVVEKGSDKHIA----YAASKAALDNMTLSFAAKLAP- 168
Query: 189 NIRTNSVAP 197
++ NS+AP
Sbjct: 169 EVKVNSIAP 177
|
Length = 236 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 2e-09
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 7/194 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGS 71
SL G +VTG RGIG L GA + E EL E + V
Sbjct: 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD 65
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
V D A+ + +E +F G ++++V N G + + + +++ N +
Sbjct: 66 VTDLAA---MQAAAEEAVERF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVF 121
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
H + P L G ++ +SS+ + + Y A+KA + L E A +
Sbjct: 122 HTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVT 180
Query: 192 TNSVAPWYTKTSLV 205
S + T LV
Sbjct: 181 VGSAYLSWIDTDLV 194
|
Length = 296 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 4e-09
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDA 75
G ALVTG T GIG+ +LA G + +RN +L QSK +V
Sbjct: 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112
Query: 76 ASPDQREKLIQEVGSKFNG-KLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTYH 132
S D E ++ + G + +L+NNVG + E E ++ N E T
Sbjct: 113 FSGDIDEG-VKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTK 171
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG---SIYGATKAAMNQLTRNLACEWAKDN 189
+ Q V P + G+I+ I S G + S ++Y ATKA ++Q +R L E+ K
Sbjct: 172 VTQAVLPGMLKRKKGAIINIGS-GAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSG 230
Query: 190 IRTNSVAPWY--TKTSLVERVMF 210
I P Y TK + + R F
Sbjct: 231 IDVQCQVPLYVATKMASIRRSSF 253
|
Length = 320 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.5 bits (131), Expect = 4e-09
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 3/195 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVC 73
L G A T ++GIG LA GA V SRNE L K ++ +S+ V VS V
Sbjct: 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + E+ ++E+ K G+ +I + G +E S E++ + +L
Sbjct: 66 DLTKREDLERTVKEL--KNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYL 123
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ + P ++ G G I++ +SV + + ++ + +M L R LA E I N
Sbjct: 124 TRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVN 183
Query: 194 SVAPWYTKTSLVERV 208
+ P +T V ++
Sbjct: 184 GIMPGIIRTDRVIQL 198
|
Length = 263 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 7e-09
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 8/186 (4%)
Query: 21 LVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASP 78
L+TG G G ++L LG V+ C K L+ S + V P
Sbjct: 4 LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRTLQLDVTK---P 60
Query: 79 DQREKLIQEVGSKFNGK-LNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+Q ++ Q V K L LVNN G ++Y K M N T + +
Sbjct: 61 EQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKA 120
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
PLL+ + G +V +SS+GG +G Y A+KAA+ + +L E ++ + +
Sbjct: 121 FLPLLRRAK-GRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIE 179
Query: 197 PWYTKT 202
P KT
Sbjct: 180 PGNFKT 185
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 8e-09
Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 14/169 (8%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-CDAASP 78
AL+ G T GIG+A LAG G + R+ L V + + D A+
Sbjct: 1 ALILGATGGIGRALARALAGRGWRLLLSGRDAGALA------GLAAEVGALARPADVAAE 54
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ L QE+G L++LV G + KP + +I+ N + L +
Sbjct: 55 LEVWALAQELGP-----LDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV--LKH 107
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
L + +VF+ + L + S Y A KAA+ E
Sbjct: 108 ALALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRG 156
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 1e-08
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 17/169 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSVC 73
T L+TGG G+G+A LA GA +V SR+ L E ++ G V+ C
Sbjct: 2 TYLITGGLGGLGRALARWLAERGARRLVLL-SRSGPDAPGAAALLAELEAAGARVTVVAC 60
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A D ++ + + G L +++ G + E ++ ++ ++L
Sbjct: 61 DVADRDALAAVLAAIPAVE-GPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNL 119
Query: 134 CQLVYPL-LKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTR 179
+L L L V SS+ G+ +GS + Y A A ++ L
Sbjct: 120 HELTADLPLDF-----FVLFSSIAGV--LGSPGQANYAAANAFLDALAE 161
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-08
Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 16/180 (8%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
LV GG +G A V+ G V S + E + +V S Q
Sbjct: 5 LVYGGRGALGSAVVQAFKSRGWWV--ASIDLAENEE-----ADASIIVLDSDSFTEQAKQ 57
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS-AEEYSKIMTTNFESTYHLCQLVYP 139
++ V GK++ L+ G S + + + N +++ L
Sbjct: 58 ---VVASVARLS-GKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATK 113
Query: 140 LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW--AKDNIRTNSVAP 197
L + G+ +V + L YGA KAA++QLT++LA E N++ P
Sbjct: 114 HLLSGGL--LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAILP 171
|
Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221 |
| >gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 2e-08
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS----- 71
G + L+TG GIG+A +A G VH RN+ + KE +++ SG+
Sbjct: 1 GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETE----SGNQNIFL 56
Query: 72 -VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
+ D + P Q + ++E + KL++L+NN G + K E + + K TN T
Sbjct: 57 HIVDMSDPKQVWEFVEEFKEEGK-KLHVLINNAGCMVNKR--ELTEDGLEKNFATNTLGT 113
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLS--------HVGSGSIYGATKAAMNQLTRNLA 182
Y L + P+L+ ++ +SS G L + G A N+ + +
Sbjct: 114 YILTTHLIPVLEKEEDPRVITVSSGGMLVQKLNTNNLQSERTAFDGTMVYAQNKRQQVIM 173
Query: 183 CE-WAKDN--IRTNSVAPWYTKTSLVERVM 209
E WAK + I + + P + T V M
Sbjct: 174 TEQWAKKHPEIHFSVMHPGWADTPAVRNSM 203
|
Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-08
Identities = 47/215 (21%), Positives = 73/215 (33%), Gaps = 55/215 (25%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
T ++TG GIG AT E L G V E V + D ++P
Sbjct: 1 TIVITGAASGIGAATAELLEDAGHTVIGIDLRE-------------ADV----IADLSTP 43
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ R I +V ++ +G L+ LVN G ++ N+ L + +
Sbjct: 44 EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVA--------GLVLKVNYFGLRALMEALL 95
Query: 139 PLLKASGVGSIVFISSVGGL----------------------------SHVGSGSIYGAT 170
P L+ + V +SS+ G G Y +
Sbjct: 96 PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGY-LAYAGS 154
Query: 171 KAAMNQLTRNLACEWAKD-NIRTNSVAPWYTKTSL 204
K A+ TR A W +R N+VAP +T +
Sbjct: 155 KEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPI 189
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 3e-08
Identities = 43/192 (22%), Positives = 68/192 (35%), Gaps = 37/192 (19%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-CDAASP 78
+V G T IG A + L+ G V T R+ SG D
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITAGRS------------------SGDYQVDITDE 42
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY-----SKIMTTNFESTYHL 133
+ L ++V G + +V+ G P E + ++ SK++ +L
Sbjct: 43 ASIKALFEKV-----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLL-----GQINL 92
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P L G GSI S + + G+ A+ R A E + IR N
Sbjct: 93 VRHGLPYL-NDG-GSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG-IRIN 149
Query: 194 SVAPWYTKTSLV 205
+V+P + SL
Sbjct: 150 AVSPGVVEESLE 161
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 3e-08
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 20/187 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFV------VSGS 71
T L+TG + G G+A + G VV T R+E F
Sbjct: 6 TWLITGVSSGFGRALAQAALAAGHRVVGT-VRSEAAR---------ADFEALHPDRALAR 55
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA-EEYSKIMTTNFEST 130
+ D D + ++ + + F G +++LVNN G + IE S E + N
Sbjct: 56 LLDVTDFDAIDAVVADAEATF-GPIDVLVNNAGYG-HEGAIEESPLAEMRRQFEVNVFGA 113
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ + V P ++A G IV I+S+GGL + Y +K A+ ++ +LA E A I
Sbjct: 114 VAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGI 173
Query: 191 RTNSVAP 197
+V P
Sbjct: 174 HVTAVEP 180
|
Length = 277 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 4e-08
Identities = 45/191 (23%), Positives = 63/191 (32%), Gaps = 49/191 (25%)
Query: 20 ALVTGGTRGIGQATVEELA--GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
LVTGG+ GIG A LA G V+ R+ V V +AA
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGSPKVLVVSRRDVV-------------------VHNAAI 41
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D G I E + T L +
Sbjct: 42 LD-----------------------DGRLID--LTGSRIERAIRANVVG---TRRLLEAA 73
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
L+KA +G + ISSV GL Y A+KAA++ L + A E + + +VA
Sbjct: 74 RELMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVAC 133
Query: 198 WYTKTSLVERV 208
S + +
Sbjct: 134 GTWAGSGMAKG 144
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 5e-08
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 14 SLKGMTALVTG--GTRGIGQATVEELAGLGA-VVHTC--SRNEVELNKCLKEWQSKGFVV 68
L+G L+ G R I + LA GA + T R E + + +E S V+
Sbjct: 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSD-LVL 61
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD + + + L + K+ GKL+ LV+++ ++ ++ S E + M
Sbjct: 62 P---CDVTNDESIDALFATIKKKW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMD 117
Query: 125 TNFESTYHLCQLVY---PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
S Y L PL+ G SI+ ++ +G V + ++ G KAA+ R L
Sbjct: 118 I---SAYSFTALAKAARPLMNNGG--SILTLTYLGSERVVPNYNVMGVAKAALEASVRYL 172
Query: 182 ACEWAKDNIRTNSVA 196
A + K+ IR N+++
Sbjct: 173 AADLGKEGIRVNAIS 187
|
Length = 259 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.3 bits (123), Expect = 6e-08
Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 19/191 (9%)
Query: 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCD 74
L+TG +RGIG+AT A G +V +R+ + ++ G VV+G D
Sbjct: 4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAG---D 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
A+ + V S F G+L+ LVNN G P + A ++ TN Y L
Sbjct: 61 VANEADVIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAY-L 118
Query: 134 C--QLVYPLLKASG--VGSIVFISSVGGLSHVGSGS---IYGATKAAMNQLTRNLACEWA 186
C + L G G+IV +SS+ S +GS + Y +K A++ LT LA E
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIA--SRLGSPNEYVDYAGSKGAVDTLTLGLAKELG 176
Query: 187 KDNIRTNSVAP 197
+R N+V P
Sbjct: 177 PHGVRVNAVRP 187
|
Length = 248 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 7e-08
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 13/196 (6%)
Query: 18 MTALV--TGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVC 73
M V TG + GIGQA E A GA + +R L V + V
Sbjct: 1 MPLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVR 60
Query: 74 DAASPDQR-EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS-AEEYSKIMTTNFESTY 131
DA + I G ++++ N G ++ T E + ++M TN+
Sbjct: 61 DADALAAAAADFIAAHGLP-----DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMV 115
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATKAAMNQLTRNLACEWAKDNI 190
Q ++A+ G++V I+SV G+ + G+G+ Y A+KAA + +L E +
Sbjct: 116 ATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGA-YSASKAAAIKYLESLRVELRPAGV 174
Query: 191 RTNSVAPWYTKTSLVE 206
R ++AP Y +T +
Sbjct: 175 RVVTIAPGYIRTPMTA 190
|
Length = 257 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 8e-08
Identities = 46/189 (24%), Positives = 84/189 (44%), Gaps = 14/189 (7%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
TAL+ G +RG+G V+ L G V R + + L+ V D P
Sbjct: 3 TALIIGASRGLGLGLVDRLLERGWQVTATVRG-PQQDTALQALP----GVHIEKLDMNDP 57
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTN--IRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
++L+Q + + + ++L N G + + + +A E ++ TN + L +
Sbjct: 58 ASLDQLLQRLQGQ---RFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARR 114
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGS---IYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ ++ G G + F+SS G + G +Y A+KAA+N +TR+ E + +
Sbjct: 115 LLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVL 173
Query: 194 SVAPWYTKT 202
S+ P + KT
Sbjct: 174 SMHPGWVKT 182
|
Length = 225 |
| >gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 1e-07
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 19/198 (9%)
Query: 17 GMTALVTG--GTRGIGQATVEELAGLGA-VVHTC--SRNEVELNKCLKEWQSKGFVVSGS 71
G L+TG R I + L GA + T + K + V+
Sbjct: 1 GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVL--- 57
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNF 127
CD ++ ++ ++L EV + GKL+ LV+++ ++ P ++ S + + K +
Sbjct: 58 PCDVSNDEEIKELFAEVKKDW-GKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDI-- 114
Query: 128 ESTYHLCQLVYPLLK--ASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
S Y L L L G GSIV +S +G V ++ G KAA+ R LA E
Sbjct: 115 -SAYSLVSLAKAALPIMNPG-GSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYEL 172
Query: 186 AKDNIRTNSVAPWYTKTS 203
+ IR N+++ KT
Sbjct: 173 GRKGIRVNAISAGPIKTL 190
|
This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 1e-07
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 18/196 (9%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL-------KEWQSKGFV 67
L G T +TG +RGIG+A + A GA V ++ K +E ++ G
Sbjct: 1 LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
+ D DQ +++ KF G ++ILVNN T++ + Y +M N
Sbjct: 61 ALPCIVDIRDEDQVRAAVEKAVEKFGG-IDILVNNASAISLTGTLDTPMKRYDLMMGVNT 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------HVGSGSIYGATKAAMNQLTRNL 181
TY + P LK S I+ +S L+ H Y K M+ +
Sbjct: 120 RGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTA----YTMAKYGMSMCVLGM 175
Query: 182 ACEWAKDNIRTNSVAP 197
A E+ I N++ P
Sbjct: 176 AEEFKPGGIAVNALWP 191
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-07
Identities = 53/207 (25%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 20 ALVTGGTRGIGQATVEELA----GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
LVTG +RG G+ +ELA G+V+ +RN+ E + LK G SG
Sbjct: 3 CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARND-EALRQLKA--EIGAERSGLRVVR 59
Query: 76 ASPD--------QREKLIQEVGSKFNGKLNILVNNVGT--NIRKPTIEYS----AEEYSK 121
S D Q K ++E+ + +L+NN GT ++ K ++ S + Y
Sbjct: 60 VSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWA 119
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ T+ + ++V ISS+ + ++Y A KAA + L + L
Sbjct: 120 LNLTSMLCLTSSVLKAFKDSPGLNR-TVVNISSLCAIQPFKGWALYCAGKAARDMLFQVL 178
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERV 208
A E N+R + AP T + ++V
Sbjct: 179 ALEEKNPNVRVLNYAPGVLDTDMQQQV 205
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 2e-07
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 39/227 (17%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC-------LKEWQSKGFVVS 69
G T ++TG GIG+ T ELA GA V R ++ KC ++ + +V
Sbjct: 1 GKTVIITGANTGIGKETARELARRGARVIMACR---DMAKCEEAAAEIRRDTLNHEVIVR 57
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE--YSKIMTTNF 127
D AS E ++ +L++L+NN G +R P YS E + N
Sbjct: 58 H--LDLASLKSIRAFAAEFLAE-EDRLDVLINNAGV-MRCP---YSKTEDGFEMQFGVNH 110
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG---------------SGSIYGATKA 172
+ L L+ LLK S IV +SS L+H +G Y +K
Sbjct: 111 LGHFLLTNLLLDLLKKSAPSRIVNVSS---LAHKAGKINFDDLNSEKSYNTGFAYCQSKL 167
Query: 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMFSN--LSLIF 217
A TR LA + N++ P +T L + LS +
Sbjct: 168 ANVLFTRELARRLQGTGVTVNALHPGVVRTELGRHTGIHHLFLSTLL 214
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 3e-07
Identities = 52/194 (26%), Positives = 79/194 (40%), Gaps = 9/194 (4%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
G ALVTG RGIG L G V + +K K + ++ D A
Sbjct: 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIA---MDVA 66
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIE-YSAEEYSKIMTTNFESTYHLC 134
Q + EV +F G+L+ LV N + T+E S +++++ N L
Sbjct: 67 DEAQVAAGVAEVLGQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLA 125
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P L+A G+IV ++S Y A+K + LT LA + IR N+
Sbjct: 126 KHCAPYLRAHN-GAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPE-IRVNA 183
Query: 195 VAP-WYTKTSLVER 207
V+P W +R
Sbjct: 184 VSPGWIDARDPSQR 197
|
Length = 255 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 3e-07
Identities = 51/207 (24%), Positives = 75/207 (36%), Gaps = 38/207 (18%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-----------------VVHTCSRNEVELNK 56
SL G T +TG +RGIG A A GA +HT + E+E
Sbjct: 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAE-EIE--- 58
Query: 57 CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA 116
+ + V D DQ + + +F G ++I VNN T +
Sbjct: 59 ---AAGGQALPL---VGDVRDEDQVAAAVAKAVERF-GGIDICVNNASAINLTGTEDTPM 111
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------HVGSGSIYGAT 170
+ + + N T+ + Q P LK S I+ +S L H Y
Sbjct: 112 KRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTA----YTMA 167
Query: 171 KAAMNQLTRNLACEWAKDNIRTNSVAP 197
K M+ T LA E+ D I N++ P
Sbjct: 168 KYGMSLCTLGLAEEFRDDGIAVNALWP 194
|
Length = 273 |
| >gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 4e-07
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSA---EEYSKIMTTNFE 128
CD Q E+ + + K+ GKL+ILV+ + + ++SA E +++ + +
Sbjct: 66 CDVQDDAQIEETFETIKQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAY 124
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S LC+ PL+ G SIV ++ +GG+ + + ++ G KAA+ R LA E
Sbjct: 125 SLAPLCKAAKPLMSEGG--SIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPK 182
Query: 189 NIRTNSVA 196
NIR N+++
Sbjct: 183 NIRVNAIS 190
|
Length = 258 |
| >gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 6e-07
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
Query: 18 MTALVTGGTRGIGQATVEELAG--LGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSVCD 74
M L+ GG+ GIG+A V++L A VH R+ ++Q + V D
Sbjct: 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHK------PDFQHDNVQWHALDVTD 54
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG---TNIRKPTIEYS-----AEEYSKIMTTN 126
A Q + + L+ L+N VG T + P E S A+ + + +T N
Sbjct: 55 EAEIKQLSEQFTQ--------LDWLINCVGMLHTQDKGP--EKSLQALDADFFLQNITLN 104
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISS-VGGLS--HVGSGSIYGATKAAMNQLTRNLAC 183
+ L + P LK S IS+ VG +S +G Y A+KAA+N + L+
Sbjct: 105 TLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSI 164
Query: 184 EW 185
EW
Sbjct: 165 EW 166
|
Length = 235 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 7e-07
Identities = 43/200 (21%), Positives = 68/200 (34%), Gaps = 25/200 (12%)
Query: 19 TALVTGGTRGIGQATVEELAGLG----AVVHTCS-----RNEVELNKCLKEWQSKGFVVS 69
T L+TG G G+ LA G A V R E +G +
Sbjct: 4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR---------RGLALR 54
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D R + + +++L+NN G ++ E ++ TN
Sbjct: 55 VEKLDLTDAIDRAQAAEW-------DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFG 107
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
L Q + A G G +VF SS+ GL Y A+K A+ + + E
Sbjct: 108 PLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFG 167
Query: 190 IRTNSVAPWYTKTSLVERVM 209
I+ +V P T + +
Sbjct: 168 IQVATVNPGPYLTGFNDTMA 187
|
Length = 257 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 8e-07
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 11/184 (5%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVT +RGIG EL GA V SRNE L K LKE + G V + D +
Sbjct: 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKA-DLSD 59
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAE-----EYSKIMTTNFESTY 131
D + L++E G ++ LV N G N+R +P + + A E + + Y
Sbjct: 60 KDDLKNLVKEAWELL-GGIDALVWNAG-NVRCEPCMLHEAGYSDWLEAALLHLV--APGY 115
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
L+ L+ G +V++SSV + + T+A + QL + ++ + IR
Sbjct: 116 LTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIR 175
Query: 192 TNSV 195
+V
Sbjct: 176 AYTV 179
|
Length = 259 |
| >gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-06
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
T L+ G +RGIG+ V + G V +R+ L L+ ++ + D A P
Sbjct: 3 TVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA-LQALGAEALAL-----DVADP 56
Query: 79 DQREKLIQEVGSKFNG-KLNILVNNVGTNIRKPTIE----YSAEEYSKIMTTNFESTYHL 133
+ + K +G L+ V G + P E + E++ +M TN L
Sbjct: 57 AS----VAGLAWKLDGEALDAAVYVAG--VYGPRTEGVEPITREDFDAVMHTNVLGPMQL 110
Query: 134 CQLVYPLLKASGVGSIVFISS----VGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
++ PL++A+G G + +SS +G + G +Y A+KAA+N R + +
Sbjct: 111 LPILLPLVEAAG-GVLAVLSSRMGSIGDATGTT-GWLYRASKAALNDALRAASLQA 164
|
Length = 222 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-06
Identities = 41/176 (23%), Positives = 60/176 (34%), Gaps = 36/176 (20%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
LVTGGT IG V L G +V R LN + D
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFH---------EGDLTD 51
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
PD E+L+ EV + + +++ + + E A+ + N T L +
Sbjct: 52 PDALERLLAEV------QPDAVIHLAAQSGVGASFEDPAD----FIRANVLGTLRLLE-- 99
Query: 138 YPLLKASGVGSIVFISSVG-----------GLSHVGSGSIYGATKAAMNQLTRNLA 182
+ +GV VF SS + +G S Y A K A +L A
Sbjct: 100 --AARRAGVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYA 153
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 2e-06
Identities = 51/198 (25%), Positives = 75/198 (37%), Gaps = 37/198 (18%)
Query: 18 MTALVTGGTRGIGQATVEELAGLG-AV-VHTCSRNEVELNKCLKEWQSKG---FVVSGSV 72
ALVTG R IG+A +LA G V VH +R+ E E ++ G +
Sbjct: 10 RAALVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQ--- 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D A + L+ + G + +LVNN ++ + + M TN + +
Sbjct: 66 ADLADEAEVRALVARASAAL-GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFV 124
Query: 133 LCQLVYPLLKASGVGSIV-------------FISSVGGLSHVGSGSIYGATKAAMNQLTR 179
L Q L A G +V F+S Y +KAA+ TR
Sbjct: 125 LAQAFARALPADARGLVVNMIDQRVWNLNPDFLS-------------YTLSKAALWTATR 171
Query: 180 NLACEWAKDNIRTNSVAP 197
LA A IR N++ P
Sbjct: 172 TLAQALAPR-IRVNAIGP 188
|
Length = 258 |
| >gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 3e-06
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK----PTIEYSAEEYSKIMTTNFE 128
D + P+ + L + + GK++ +V++V ++ +E S E ++ M +
Sbjct: 62 LDVSKPEHFKSLAESLKKDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVY 120
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S L + + PLL S++ +S +GG+ +V ++ G KAA+ R LA + K
Sbjct: 121 SLIELTRALLPLLNDGA--SVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKK 178
Query: 189 NIRTNSVAPWYTKT 202
IR N+++ KT
Sbjct: 179 GIRVNAISAGPIKT 192
|
Length = 274 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 3e-06
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASP 78
++TG ++G+G+A +L G V + SR E EL K +++ S S D
Sbjct: 4 VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHS---LDLQDV 60
Query: 79 DQREKLIQEVGS---KFNGKLNILVNNVG--TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ E E+ S + N L+NN G I KP + +EE + N + L
Sbjct: 61 HELETNFNEILSSIQEDNVSSIHLINNAGMVAPI-KPIEKAESEELITNVHLNLLAPMIL 119
Query: 134 CQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN--I 190
K ++ ISS + S Y ++KA ++ T+ +A E ++ +
Sbjct: 120 TSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPV 179
Query: 191 RTNSVAP 197
+ + +P
Sbjct: 180 KIVAFSP 186
|
Length = 251 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 4e-06
Identities = 58/213 (27%), Positives = 82/213 (38%), Gaps = 23/213 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKEWQSKG 65
L G +VTG GIG+A A GA V + + E + G
Sbjct: 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63
Query: 66 --FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
V +G D A D L+ F G L++LVNN G + S EE+ ++
Sbjct: 64 GEAVANGD--DIADWDGAANLVDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVI 120
Query: 124 TTN----FESTYHLCQLVYPLLKASGV--GSIVFISSVGGLS-HVGSGSIYGATKAAMNQ 176
+ F + H KA I+ SS GL VG G+ Y A KA +
Sbjct: 121 AVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGN-YSAAKAGIAA 179
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
LT A E + + N++AP +T + E V
Sbjct: 180 LTLVAAAELGRYGVTVNAIAP-AARTRMTETVF 211
|
Length = 286 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 7e-06
Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 21/149 (14%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV------ELNKCLKEWQSKGFV 67
L G TA+VTGG G+G T LA GA V+ R +V ++
Sbjct: 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG----------- 72
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
V + D A + + +++IL+NN G + + + TN
Sbjct: 73 VEVVMLDLADLESVRAFAERFLDSGR-RIDILINNAG--VMACPETRVGDGWEAQFATNH 129
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVG 156
+ L L++P L A +V +SS G
Sbjct: 130 LGHFALVNLLWPALAAGAGARVVALSSAG 158
|
Length = 315 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 7e-06
Identities = 37/166 (22%), Positives = 57/166 (34%), Gaps = 34/166 (20%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
L+ G T IG+A EL G V RN L+K +E V+ D D
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQE------PVAVVEGDLRDLD 54
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP 139
+Q V +++++ G + E T ++ +
Sbjct: 55 SLSDAVQGV--------DVVIHLAGAPRDTRDFC----------EVDVEGTRNVLE---- 92
Query: 140 LLKASGVGSIVFISSVGGLSHVGSG------SIYGATKAAMNQLTR 179
K +GV +FISS+G + S Y A KA + R
Sbjct: 93 AAKEAGVKHFIFISSLGAYGDLHEETEPSPSSPYLAVKAKTEAVLR 138
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 8e-06
Identities = 47/187 (25%), Positives = 78/187 (41%), Gaps = 10/187 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
T +TG + G G+ E L G V R L+ + + +V+ V D+A+
Sbjct: 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAA- 62
Query: 79 DQREKLIQE-VGSKFN--GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
++ V F G+++++V+N G + E S + + + TN + + +
Sbjct: 63 ------VRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIR 116
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
P L+ G G IV +SS GG S+Y ATK + +A E A I V
Sbjct: 117 AALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIV 176
Query: 196 APWYTKT 202
P +T
Sbjct: 177 EPGPART 183
|
Length = 276 |
| >gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.1 bits (104), Expect = 2e-05
Identities = 45/198 (22%), Positives = 75/198 (37%), Gaps = 22/198 (11%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
L+TG T GIG+ + A G V C RN+ L++ L + F ++ V D P
Sbjct: 3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-LHTQSANIFTLAFDVTD--HP 59
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY------SAEEYSKIMTTNFESTYH 132
+ L S+ + + N G EY A +++ N +
Sbjct: 60 GTKAAL-----SQLPFIPELWIFNAGD------CEYMDDGKVDATLMARVFNVNVLGVAN 108
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ + P L +V + S+ + YGA+KAA+ R L + I
Sbjct: 109 CIEGIQPHLSCGH--RVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEV 166
Query: 193 NSVAPWYTKTSLVERVMF 210
+V P + T L ++ F
Sbjct: 167 VTVFPGFVATPLTDKNTF 184
|
Length = 240 |
| >gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-05
Identities = 50/205 (24%), Positives = 80/205 (39%), Gaps = 52/205 (25%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRN--------------EVELNKCLKEWQS 63
+ A+VTG +RG+G A E+L G V +R+ EVEL+ L + +
Sbjct: 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELD--LSDAAA 59
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGT--NIRKPTIEYSAEEYSK 121
++G + A L L+NN GT I P A ++
Sbjct: 60 AAAWLAGDLLAAFVDGASRVL--------------LINNAGTVEPI-GPLATLDAAAIAR 104
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGS---------IVFISSVGGLSHVGSGSIYGATKA 172
+ N + PL+ + + I+ ISS + S+Y ATKA
Sbjct: 105 AVGLN---------VAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA 155
Query: 173 AMNQLTRNLACEWAKDNIRTNSVAP 197
A++ R +A + A +R S+AP
Sbjct: 156 ALDHHARAVALD-ANRALRIVSLAP 179
|
Length = 243 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-05
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK---EWQSKGFVVSGSVCDAAS 77
L+TG + G+G E A G + C+R L + LK + G V+ + D
Sbjct: 6 LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEE-LKAELLARYPGIKVAVAALDVND 64
Query: 78 PDQREKLIQEVGSKFNGKLNILVN-------NVGT---NIRKPTIEYSAEEYSKIMTTNF 127
DQ ++ E + G ++VN +GT K T E TNF
Sbjct: 65 HDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAE-----------TNF 113
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATKAAMNQLTRNLACEWA 186
+ C+ + + G G +V ISSV + + G + Y A+KA + L L E A
Sbjct: 114 VAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELA 173
Query: 187 KDNIRTNSVAPWYTKTSLVERV 208
K I+ +++ P Y ++ + +
Sbjct: 174 KTPIKVSTIEPGYIRSEMNAKA 195
|
Length = 248 |
| >gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-05
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNFE 128
D P Q E + + ++ G+L+ L++++ ++ ++ S E ++ M +
Sbjct: 67 LDVREPGQLEAVFARIAEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCH 125
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S + +L PL+ G S++ +S G V + ++ G KAA+ R LA E
Sbjct: 126 SFIRMARLAEPLMTNGG--SLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPK 183
Query: 189 NIRTNSVAPWYTKT 202
IR ++++P KT
Sbjct: 184 GIRVHAISPGPLKT 197
|
Length = 258 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 4e-05
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 17/167 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSV 72
T LVTGG G+G LA GA V+ SR+ E L E +++G V+
Sbjct: 2 TYLVTGGLGGLGLELARWLAERGARHLVL--LSRSGAPDPEAEALLAELEARGAEVTVVA 59
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD + D L+ E+ + L +++ G +AE++++++ ++
Sbjct: 60 CDVSDRDAVRALLAEIRADG-PPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWN 118
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQL 177
L + + + V SS+ G+ +GS + Y A A ++ L
Sbjct: 119 LHE----ATRDRPLDFFVLFSSIAGV--LGSPGQANYAAANAFLDAL 159
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 9e-05
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)
Query: 21 LVTGGTRGIGQATVEELA-GLGAVVHTCSR---NEVELNK--CLKEWQSKG---FVVSGS 71
LVTGG GIG+A LA GA + R E K L ++ G +S
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-SAEEYSKIMTTNFEST 130
V DAA+ + L+++V ++ G ++ +++ G +R + +AE++ ++ +
Sbjct: 269 VTDAAAVRR---LLEKVRERY-GAIDGVIHAAGV-LRDALLAQKTAEDFEAVLAPKVDGL 323
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164
+L Q L + V SSV + G
Sbjct: 324 LNLAQ----ALADEPLDFFVLFSSV--SAFFGGA 351
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 7/74 (9%)
Query: 21 LVTGGTRGIGQATVEELAGLGA---VVHTCSRN--EVELNKCLKEWQSKGFVVSGSVCDA 75
L+TGG G+G LA GA V+ SR ++ G VS CD
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVL--LSRRGPAPRAAARAALLRAGGARVSVVRCDV 211
Query: 76 ASPDQREKLIQEVG 89
P L+ E+
Sbjct: 212 TDPAALAALLAELA 225
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------EVELNKCLKEWQS---- 63
L+G ALV G TRG G+ EL GA V+ R+ E + + ++E
Sbjct: 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA 64
Query: 64 ---KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNV 103
+G V D P+Q L++ + + G+L+ILVN++
Sbjct: 65 AGGRGIAVQ---VDHLVPEQVRALVERIDRE-QGRLDILVNDI 103
|
Length = 305 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 4e-04
Identities = 35/184 (19%), Positives = 57/184 (30%), Gaps = 38/184 (20%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTG T +G A V EL G V RN + +
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNP------------EAAAALAGGVEVVL 48
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D R+ G G +L + + + + + A + + V
Sbjct: 49 GDLRDPKSLVAG--AKGVDGVL---LISGLLDGSDAFRAVQVT---------------AV 88
Query: 138 YPLLKASGVG--SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
+A+G G V +S +G + S S KAA+ R+ + +R +
Sbjct: 89 VRAAEAAGAGVKHGVSLSVLGADAA--SPSALARAKAAVEAALRSSGIPYT--TLRRAAF 144
Query: 196 APWY 199
Sbjct: 145 YLGA 148
|
Length = 275 |
| >gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 5e-04
Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNFE 128
CD + + + + K+ GKL+ +V+ +G + ++ S + ++ M +
Sbjct: 67 CDVTDEASIDAVFETLEKKW-GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVY 125
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S + Q L+ G SI+ ++ G + ++ G KAA+ + LA +
Sbjct: 126 SFTAVAQRAEKLMTDGG--SILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPK 183
Query: 189 NIRTNSVAPWYTKT 202
NIR N+++ KT
Sbjct: 184 NIRVNAISAGPIKT 197
|
Length = 272 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 6e-04
Identities = 50/184 (27%), Positives = 74/184 (40%), Gaps = 16/184 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC---D 74
+ L+TG + GIG L G V TC R E ++ E G D
Sbjct: 6 SILITGCSSGIGAYCARALQSDGWRVFATC-RKEEDVAALEAE---------GLEAFQLD 55
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYHL 133
A P+ L+ +V G+L+ L NN G + +E E NF + L
Sbjct: 56 YAEPESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDL 114
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V P+++ G G IV SS+ GL + Y A+K A+ L+ L E I +
Sbjct: 115 TRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVS 174
Query: 194 SVAP 197
+ P
Sbjct: 175 LIEP 178
|
Length = 277 |
| >gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.002
Identities = 34/133 (25%), Positives = 48/133 (36%), Gaps = 14/133 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC----D 74
T ++TG + G+G + LA G V RN L K Q G S D
Sbjct: 8 TVIITGASSGVGLYAAKALAKRGWHVIMACRN---LKKAEAAAQELGIP-PDSYTIIHID 63
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI---EYSAEEYSKIMTTNFESTY 131
D + + + L+ LV N + P + S + Y M TN +
Sbjct: 64 LGDLDSVRRFVDDF-RALGKPLDALVCNAA--VYMPLLKEPLRSPQGYELSMATNHLGHF 120
Query: 132 HLCQLVYPLLKAS 144
LC L+ LK S
Sbjct: 121 LLCNLLLEDLKKS 133
|
Length = 322 |
| >gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase | Back alignment and domain information |
|---|
Score = 38.0 bits (88), Expect = 0.002
Identities = 47/204 (23%), Positives = 75/204 (36%), Gaps = 30/204 (14%)
Query: 20 ALVTGGTRGIGQATVEEL--AGLGAVVH------TCSRNEVELNKCLKEWQSKGFVVSGS 71
A+VTG + IG + L G V+H S ELN +
Sbjct: 4 AVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA---RRPNSAVTCQAD 60
Query: 72 VCDAAS-PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE-----------Y 119
+ ++A+ + E +I F G+ ++LVNN P + A E
Sbjct: 61 LSNSATLFSRCEAIIDACFRAF-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQV 119
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVG------SIVFISSVGGLSHVGSGSIYGATKAA 173
+++ +N + Y L + + SIV + + ++Y K A
Sbjct: 120 AELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHA 179
Query: 174 MNQLTRNLACEWAKDNIRTNSVAP 197
+ LTR+ A E A IR N VAP
Sbjct: 180 LEGLTRSAALELAPLQIRVNGVAP 203
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 218 | |||
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 100.0 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 100.0 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 100.0 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 100.0 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 100.0 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 100.0 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 100.0 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 100.0 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 100.0 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 100.0 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.98 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.98 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.98 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.98 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.98 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.98 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.98 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.97 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.96 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.96 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.96 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.95 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.94 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.94 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.93 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.93 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.93 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.92 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.9 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.9 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.88 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.88 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.88 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.86 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.86 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.86 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.86 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.85 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.85 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.85 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.85 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.84 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.83 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.82 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.82 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.82 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.81 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.81 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.81 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.8 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.78 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.78 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.78 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.77 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.77 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.77 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.76 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.76 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.75 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.73 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.73 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.73 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.72 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.69 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.69 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.69 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.69 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.69 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.68 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.68 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.66 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.65 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.64 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.64 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.63 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.63 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.62 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.58 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.57 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.54 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.54 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.52 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.51 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.48 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.48 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.47 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.47 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.47 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.42 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.37 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.36 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.36 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.3 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.29 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 99.29 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.2 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.19 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.17 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.14 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.13 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.11 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.08 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.01 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.87 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.85 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.82 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.82 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.81 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.76 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.7 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.68 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.66 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.6 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.58 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.56 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.51 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.47 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.47 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.41 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.38 | |
| PLN00106 | 323 | malate dehydrogenase | 98.35 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.3 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.29 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.25 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.23 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.21 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.16 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.07 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.01 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.93 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.93 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.87 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.8 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.8 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.79 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.74 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.72 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.71 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.69 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.63 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.58 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.57 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.56 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.49 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.48 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.44 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.43 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.43 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.39 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.39 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.36 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.35 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.32 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.29 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.25 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.25 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.24 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.19 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.16 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.12 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 97.12 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 97.11 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.11 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 97.08 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.08 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 97.04 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.04 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.02 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 97.02 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.01 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 97.01 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 97.01 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.96 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.96 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.91 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.87 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.83 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.83 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.82 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.8 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.8 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.8 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.77 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.76 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.76 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 96.74 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.74 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.72 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 96.72 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.72 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.71 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.71 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.7 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.69 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.68 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.68 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.68 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.67 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.62 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.61 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.61 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.6 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.59 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.56 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.56 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.55 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.54 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.54 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.53 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.53 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.5 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.49 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.45 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.41 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 96.39 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 96.39 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.37 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.34 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.32 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.31 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.3 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.3 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.28 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.26 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.26 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.25 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.25 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.24 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.2 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.18 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.15 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.11 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 96.1 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.08 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.07 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.07 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.03 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.03 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.02 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.01 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.98 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.94 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.94 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.93 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.91 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 95.91 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.9 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 95.88 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.86 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.82 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.8 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.8 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.74 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 95.74 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 95.73 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 95.7 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.69 | |
| COG2263 | 198 | Predicted RNA methylase [Translation, ribosomal st | 95.67 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 95.62 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.61 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 95.61 | |
| TIGR00537 | 179 | hemK_rel_arch HemK-related putative methylase. The | 95.61 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.6 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.55 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 95.53 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 95.53 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.52 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 95.52 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.52 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.51 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 95.5 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.5 | |
| PRK08223 | 287 | hypothetical protein; Validated | 95.44 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 95.39 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.39 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 95.37 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 95.35 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 95.33 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 95.31 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.31 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.3 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.26 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 95.24 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 95.23 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 95.23 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 95.21 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 95.18 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.15 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.14 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 95.12 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.12 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 95.09 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 95.06 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 95.05 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 95.05 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.04 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.04 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.03 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.03 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.01 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.0 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.95 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 94.95 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 94.94 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 94.92 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 94.88 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 94.88 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.88 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.88 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.84 | |
| PRK07411 | 390 | hypothetical protein; Validated | 94.83 |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-44 Score=283.26 Aligned_cols=192 Identities=30% Similarity=0.419 Sum_probs=184.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+.+++++|||||+|||.++|++|+++|++|++++|++++++++.+++++. +..+..+++|+++.++++++.+++.+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 356889999999999999999999999999999999999999999998765 5789999999999999999999999986
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+.||++|||||+...+++.+.++++.++++++|+.+...+.++++|.|.+++.|+||+++|.++..+.|.++.|++||+
T Consensus 83 -~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa 161 (265)
T COG0300 83 -GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKA 161 (265)
T ss_pred -CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++.+|+++|+.|+.++||+|.+|+||++.|++++
T Consensus 162 ~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~ 195 (265)
T COG0300 162 FVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD 195 (265)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence 9999999999999999999999999999999996
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-44 Score=276.51 Aligned_cols=192 Identities=30% Similarity=0.435 Sum_probs=181.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
...+|+++|||||||||.++|++|++.|++|++++|+.++++.+..++.+ ..+.+..+|++|.++++++++.+.+++
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~- 79 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF- 79 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh-
Confidence 34679999999999999999999999999999999999999999988865 568899999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.++|++++++|+.|.++..++.+|.|.+++.|+||++||+++..+.|+...||++|++
T Consensus 80 g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~a 159 (246)
T COG4221 80 GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAA 159 (246)
T ss_pred CcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHH
Confidence 79999999999998899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+..|++.|+.|+...+|||.+|+||.+.|+.+...
T Consensus 160 V~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v 194 (246)
T COG4221 160 VRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTV 194 (246)
T ss_pred HHHHHHHHHHHhcCCCeeEEEecCceecceecccc
Confidence 99999999999999999999999999977655443
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=285.99 Aligned_cols=196 Identities=28% Similarity=0.334 Sum_probs=178.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CC-eEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GF-VVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~-~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
...++||+|+|||||+|||.++|++|+++|++++++.|..++++...+++.+. .. +++.+++|++|.++++++++.+.
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999988888876776543 22 59999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+++ |++|++|||||........+.+.+++.+.|++|++|+.++.++++|+|++++.|+||++||++|+.+.|....|++
T Consensus 87 ~~f-g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~A 165 (282)
T KOG1205|consen 87 RHF-GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSA 165 (282)
T ss_pred Hhc-CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccch
Confidence 999 7999999999998866777889999999999999999999999999999988899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCC--eEEEEeecccccChhhHHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDN--IRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~g--v~v~~v~PG~v~t~~~~~~~ 209 (218)
||+|+++|.++|++|+.+.+ |++ .|+||+|+|++.....
T Consensus 166 SK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~ 206 (282)
T KOG1205|consen 166 SKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKEL 206 (282)
T ss_pred HHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhh
Confidence 99999999999999999887 566 9999999999766544
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=272.01 Aligned_cols=198 Identities=28% Similarity=0.386 Sum_probs=187.4
Q ss_pred cccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 8 ~~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
++.+..+.+|++||||||++|+|+++|.+|+++|+++++.+.+.+..++..+++...+ .+....||+++.+++.+..++
T Consensus 29 l~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~ 107 (300)
T KOG1201|consen 29 LPKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKK 107 (300)
T ss_pred cccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHH
Confidence 4557778999999999999999999999999999999999999999999988887654 899999999999999999999
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
++++. |++|++|||||+....++.+.+.+++++.+++|+.|++...|+|+|.|.+.+.|+||.++|.+|..+.++..+|
T Consensus 108 Vk~e~-G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~Y 186 (300)
T KOG1201|consen 108 VKKEV-GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADY 186 (300)
T ss_pred HHHhc-CCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhh
Confidence 99999 79999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhc---cCCeEEEEeecccccChhhHH
Q 027816 168 GATKAAMNQLTRNLACEWA---KDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~---~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+||+|+.+|+++|..|+. ..||+...|||++++|+|.+.
T Consensus 187 caSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~ 229 (300)
T KOG1201|consen 187 CASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG 229 (300)
T ss_pred hhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence 9999999999999999985 447999999999999999997
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-41 Score=269.97 Aligned_cols=194 Identities=25% Similarity=0.322 Sum_probs=177.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++..+++|++|.++++++++++. +
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~ 82 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N 82 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence 3578999999999999999999999999999999999988887777666443 4568889999999999999999986 4
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||.++..+.++...|+++|
T Consensus 83 ~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asK 161 (263)
T PRK08339 83 I-GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVR 161 (263)
T ss_pred h-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHH
Confidence 6 689999999998776778899999999999999999999999999999888779999999999998989999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+|+++|+++++.|++++|||||+|+||+++|+|.++.
T Consensus 162 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~ 198 (263)
T PRK08339 162 ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQL 198 (263)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHH
Confidence 9999999999999999999999999999999997654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=262.09 Aligned_cols=193 Identities=25% Similarity=0.359 Sum_probs=172.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++||+++||||++|||+++|++|+++|++|++++|+.. +...+.++..+.++..+.+|+++.++++++++++.+.+
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM 81 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999999988653 23333444445678889999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++...|+++|
T Consensus 82 -g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 160 (251)
T PRK12481 82 -GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK 160 (251)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence 6899999999987777788899999999999999999999999999997654 58999999999998888899999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++++.|+.++|||||+|+||+++|++.+..
T Consensus 161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~ 197 (251)
T PRK12481 161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL 197 (251)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc
Confidence 9999999999999999999999999999999987643
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=260.34 Aligned_cols=194 Identities=28% Similarity=0.427 Sum_probs=178.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh--CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. .+..+..+++|+++.++++++++++.+.
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999888887777765 3557888999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|++|||||.....+..+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++..+|+++|
T Consensus 84 ~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (260)
T PRK07063 84 F-GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAK 162 (260)
T ss_pred h-CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHH
Confidence 8 699999999998766666778899999999999999999999999999887778999999999999989999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++++.|+.+.|||||+|+||+++|++.+..
T Consensus 163 aa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~ 199 (260)
T PRK07063 163 HGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDW 199 (260)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhh
Confidence 9999999999999999999999999999999997653
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=262.41 Aligned_cols=188 Identities=24% Similarity=0.310 Sum_probs=163.7
Q ss_pred ccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++||+++||||+ +|||+++|++|+++|++|++++|+.+. .+..+.+. +.+.. ..+++|++|.++++++++++.+
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence 3578999999997 899999999999999999999998532 22222221 11223 5688999999999999999999
Q ss_pred hcCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCch
Q 027816 91 KFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~ 166 (218)
++ +++|++|||||.... .++.+.+.++|++.+++|+.+++++++.++|+|.++ ++||++||.++..+.+++..
T Consensus 80 ~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~~~~~~ 156 (274)
T PRK08415 80 DL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG--ASVLTLSYLGGVKYVPHYNV 156 (274)
T ss_pred Hc-CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcEEEEecCCCccCCCcchh
Confidence 98 799999999997542 567789999999999999999999999999999653 79999999999888888999
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.+
T Consensus 157 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~ 196 (274)
T PRK08415 157 MGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAAS 196 (274)
T ss_pred hhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHh
Confidence 9999999999999999999999999999999999999864
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=257.89 Aligned_cols=195 Identities=29% Similarity=0.395 Sum_probs=179.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.+++||+++||||++|||++++++|+++|++|++++|+.+++++..+++... ...+..+.+|++|.++++++++++.+
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999998887777666543 34788899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+ +++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++.++||++||..+..+.++...|+++
T Consensus 84 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~as 162 (265)
T PRK07062 84 RF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAA 162 (265)
T ss_pred hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHH
Confidence 98 68999999999877677888999999999999999999999999999988877899999999999998999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+++++++++++.|+.+.||+||+|+||+++|++.++.
T Consensus 163 Kaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~ 200 (265)
T PRK07062 163 RAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRR 200 (265)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhH
Confidence 99999999999999999999999999999999987643
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=261.62 Aligned_cols=189 Identities=20% Similarity=0.253 Sum_probs=164.1
Q ss_pred ccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++|++|||||++ |||+++|++|+++|++|++++|+.+..+. .+++.........+++|++|.++++++++++.++
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~ 82 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK 82 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 36789999999997 99999999999999999999988643332 2233221112346899999999999999999999
Q ss_pred cCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 92 FNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ |++|++|||||.... .++.+.+.++|++.+++|++++++++++++|+|.+ .|+||++||.++..+.+++..|
T Consensus 83 ~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y 159 (271)
T PRK06505 83 W-GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVM 159 (271)
T ss_pred h-CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchh
Confidence 8 699999999997642 45678899999999999999999999999999974 3899999999998888899999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|+|+.+|+++|+.|++++|||||+|+||+++|+|.+
T Consensus 160 ~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~ 198 (271)
T PRK06505 160 GVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA 198 (271)
T ss_pred hhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc
Confidence 999999999999999999999999999999999999853
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=259.19 Aligned_cols=191 Identities=27% Similarity=0.323 Sum_probs=167.0
Q ss_pred CccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChh--hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 13 ~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
++++||+++||||+ +|||+++|++|+++|++|++..|+.+ +.++..+++.+....+..+++|++|.++++++++++
T Consensus 2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 81 (258)
T PRK07370 2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI 81 (258)
T ss_pred cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence 35689999999986 89999999999999999988876543 233444444443345678899999999999999999
Q ss_pred HhhcCCcccEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC
Q 027816 89 GSKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~ 164 (218)
.+.+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++ .++||++||..+..+.++.
T Consensus 82 ~~~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~ 158 (258)
T PRK07370 82 KQKW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNY 158 (258)
T ss_pred HHHc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCccc
Confidence 9998 69999999999753 256778899999999999999999999999999975 3799999999998888999
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
..|+++|+|+.+|+++|+.|++++||+||+|+||+++|++.+
T Consensus 159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~ 200 (258)
T PRK07370 159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASS 200 (258)
T ss_pred chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhh
Confidence 999999999999999999999999999999999999999864
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=258.56 Aligned_cols=192 Identities=30% Similarity=0.477 Sum_probs=175.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 80 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF- 80 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-
Confidence 3678999999999999999999999999999999999 66777777776556678899999999999999999999998
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||... ..++.+.+.+.|++.+++|+.+++++++.++|+|.+.+ ++||++||..+..+.++...|+++|+
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa 159 (272)
T PRK08589 81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKG 159 (272)
T ss_pred CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHH
Confidence 68999999999864 35677889999999999999999999999999998765 89999999999988889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++|+++++.|+.+.||+||+|+||+|+|++.++.
T Consensus 160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~ 195 (272)
T PRK08589 160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKL 195 (272)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhh
Confidence 999999999999999999999999999999997653
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=258.24 Aligned_cols=193 Identities=22% Similarity=0.286 Sum_probs=166.4
Q ss_pred CCCccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+..+++||+++||||+ +|||+++|++|+++|++|++++|+.+..+ ..+++......+..+++|++|.++++++++++
T Consensus 4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 82 (258)
T PRK07533 4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARI 82 (258)
T ss_pred cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHH
Confidence 4456789999999999 49999999999999999999999864322 12222221123457889999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC
Q 027816 89 GSKFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~ 164 (218)
.+++ +++|++|||||.... +++.+.+.++|++.+++|+.+++++++.++|+|++ .++||++||..+..+.+++
T Consensus 83 ~~~~-g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~ 159 (258)
T PRK07533 83 AEEW-GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENY 159 (258)
T ss_pred HHHc-CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccc
Confidence 9998 799999999997642 46778899999999999999999999999999964 4799999999888888889
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
..|+++|+|+.+|+++|+.|+.++|||||+|+||+++|+|.+.
T Consensus 160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~ 202 (258)
T PRK07533 160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG 202 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc
Confidence 9999999999999999999999999999999999999998653
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=258.38 Aligned_cols=187 Identities=24% Similarity=0.295 Sum_probs=166.3
Q ss_pred ccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++||+++||||+ +|||+++|++|+++|++|++++|+. +..+..+++.. ..+..+++|+++.++++++++++.++
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 80 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD--EEDLLVECDVASDESIERAFATIKER 80 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc--CceeEEeCCCCCHHHHHHHHHHHHHH
Confidence 3678999999999 7999999999999999999999984 33444444332 35778899999999999999999999
Q ss_pred cCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 92 FNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ +++|++|||||.... +++.+.+.++|++.+++|+.+++++++.++|+|.+ .++||++||.++..+.+++..|
T Consensus 81 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y 157 (252)
T PRK06079 81 V-GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVM 157 (252)
T ss_pred h-CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhh
Confidence 8 799999999997643 56778999999999999999999999999999964 3799999999998888899999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|+|+++|+++|+.|++++|||||+|+||+|+|+|.+
T Consensus 158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~ 196 (252)
T PRK06079 158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVT 196 (252)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccc
Confidence 999999999999999999999999999999999999864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=256.36 Aligned_cols=194 Identities=30% Similarity=0.404 Sum_probs=177.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 81 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF- 81 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-
Confidence 4678999999999999999999999999999999999988888877776666678889999999999999999999998
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhhhhH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATK 171 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~~sK 171 (218)
+++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++. .+.++...|++||
T Consensus 82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK 161 (254)
T PRK07478 82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASK 161 (254)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHH
Confidence 69999999999753 356778899999999999999999999999999988877899999998876 4678889999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++++.|+.+.||+||+|+||+++|+|.+..
T Consensus 162 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 198 (254)
T PRK07478 162 AGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAM 198 (254)
T ss_pred HHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccc
Confidence 9999999999999999999999999999999987643
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=256.85 Aligned_cols=194 Identities=31% Similarity=0.423 Sum_probs=174.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++||++|||||++|||++++++|+++|++|++++|+.++.+...+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL 84 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999999988888877776666678889999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcC-C-CCchhhh
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHV-G-SGSIYGA 169 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~-~-~~~~Y~~ 169 (218)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+.... + ....|++
T Consensus 85 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a 163 (253)
T PRK05867 85 -GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA 163 (253)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence 6899999999987777788889999999999999999999999999997654 4789999998776532 3 4579999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|++++++++++++|+.++||+||+|+||+++|++.++
T Consensus 164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~ 201 (253)
T PRK05867 164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEP 201 (253)
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCccccc
Confidence 99999999999999999999999999999999998754
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-40 Score=242.30 Aligned_cols=197 Identities=24% Similarity=0.290 Sum_probs=180.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++.|+++||||++|||++++..|++.|++|++.+++.+..+.....+... ..-....||+++.++++..+++..+++
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~- 88 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSL- 88 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhc-
Confidence 356789999999999999999999999999999999999888888877654 345667899999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhH--hCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK--ASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~--~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
|+++++++|||+..++.+...+.++|++.+.+|+.|.+.+.|++...|. ++.+.+||++||+-+..+.-+...|+++|
T Consensus 89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK 168 (256)
T KOG1200|consen 89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASK 168 (256)
T ss_pred CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhc
Confidence 6999999999998888888999999999999999999999999998843 44445999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHhcc
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMFSN 212 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~~~ 212 (218)
.++-+|++..++|++.++||||.|+||+|.|||.+.++++.
T Consensus 169 ~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v 209 (256)
T KOG1200|consen 169 GGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKV 209 (256)
T ss_pred CceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHH
Confidence 99999999999999999999999999999999999887654
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=264.73 Aligned_cols=193 Identities=27% Similarity=0.367 Sum_probs=180.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++..+.+|++|.++++++++++.+.+
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 82 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG- 82 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc-
Confidence 4678999999999999999999999999999999999999888888877667778889999999999999999999887
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||....+++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||+++|..+..+.++...|+++|++
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaa 162 (330)
T PRK06139 83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFG 162 (330)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHH
Confidence 68999999999887788899999999999999999999999999999998877999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccC-CeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKD-NIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~-gv~v~~v~PG~v~t~~~~~ 207 (218)
+.+|+++|+.|+.+. ||+|++|+||+++||+.+.
T Consensus 163 l~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~ 197 (330)
T PRK06139 163 LRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRH 197 (330)
T ss_pred HHHHHHHHHHHhCCCCCeEEEEEecCCccCccccc
Confidence 999999999999874 9999999999999998754
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=258.43 Aligned_cols=193 Identities=27% Similarity=0.445 Sum_probs=178.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++...+.++..+++|++|.++++++++++.+.+
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 81 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL- 81 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence 4679999999999999999999999999999999999988888777776656678889999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||....+++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||.++..+.++...|+++|+
T Consensus 82 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 161 (275)
T PRK05876 82 GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKY 161 (275)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHH
Confidence 6899999999987777888999999999999999999999999999997664 589999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++|+++|+.|+.+.||+|++|+||+++|++..+
T Consensus 162 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 196 (275)
T PRK05876 162 GVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN 196 (275)
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence 99999999999999999999999999999998754
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=255.68 Aligned_cols=190 Identities=22% Similarity=0.242 Sum_probs=166.9
Q ss_pred CccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCCh---hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 13 ~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
++++||+++||||+ +|||+++|++|+++|++|++++|+. +.+++..+++. +..+..+++|++|.+++++++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence 35789999999997 8999999999999999999987753 33444444332 34677889999999999999999
Q ss_pred HHhhcCCcccEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC
Q 027816 88 VGSKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~ 163 (218)
+.+++ |++|++|||||... .+++.+.+.++|++.+++|+.+++.+++.++|+|.+ .|+||++||.++..+.++
T Consensus 81 ~~~~~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~ 157 (257)
T PRK08594 81 IKEEV-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQN 157 (257)
T ss_pred HHHhC-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCC
Confidence 99998 79999999999753 246678899999999999999999999999999964 479999999999988899
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
..+|+++|+|+++|+++++.|++++|||||+|+||+++|++.+.
T Consensus 158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~ 201 (257)
T PRK08594 158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG 201 (257)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh
Confidence 99999999999999999999999999999999999999998653
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=255.92 Aligned_cols=189 Identities=22% Similarity=0.261 Sum_probs=163.8
Q ss_pred ccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++||+++||||++ |||+++|++|+++|++|++.+|+. ..++..+++.........+++|++|.++++++++++.++
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK 83 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999999997 999999999999999999998874 333334444322112245789999999999999999999
Q ss_pred cCCcccEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 92 FNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.+.|+|++ .|+||++||..+..+.+++..|
T Consensus 84 ~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y 160 (260)
T PRK06603 84 W-GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVM 160 (260)
T ss_pred c-CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccch
Confidence 8 69999999999753 246778899999999999999999999999999964 4799999999888888899999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|+|+.+|+++++.|++++|||||+|+||+++|+|.+
T Consensus 161 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~ 199 (260)
T PRK06603 161 GVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASS 199 (260)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhh
Confidence 999999999999999999999999999999999999854
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=260.92 Aligned_cols=193 Identities=25% Similarity=0.355 Sum_probs=167.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh----------hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE----------VELNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~----------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 83 (218)
+++||+++||||++|||+++|++|+++|++|++++|+. +..+...+.+...+..+..+++|+++.+++++
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 57899999999999999999999999999999999974 34455555555555567889999999999999
Q ss_pred HHHHHHhhcCCcccEEEecC-CCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc
Q 027816 84 LIQEVGSKFNGKLNILVNNV-GTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL 158 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~a-g~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~ 158 (218)
+++++.+.+ |++|++|||| |... ..++.+.+.++|.+.+++|+.++++++++++|+|.+++.|+||++||..+.
T Consensus 85 ~~~~~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~ 163 (305)
T PRK08303 85 LVERIDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE 163 (305)
T ss_pred HHHHHHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc
Confidence 999999999 6999999999 7531 256778889999999999999999999999999987767899999997654
Q ss_pred C---cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 159 S---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 159 ~---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
. +.++...|+++|+|+.+|+++|+.|+++.|||||+|+||+++|+|.+.
T Consensus 164 ~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~ 215 (305)
T PRK08303 164 YNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLD 215 (305)
T ss_pred ccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHH
Confidence 3 334567899999999999999999999999999999999999999754
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=254.89 Aligned_cols=193 Identities=44% Similarity=0.527 Sum_probs=174.8
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC---CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
..++.||+++|||+++|||+++|++|++.|++|++++|+++.+++..+.+... ..++..+.||+++.++++++++..
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999988888776544 346999999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCC-CCCCCCHHHHHHHHHhhhhh-HHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC-c
Q 027816 89 GSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFES-TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-S 165 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~-~~~~~~~~~~~~~~~~nv~~-~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-~ 165 (218)
.+++.|++|++|+|||..... ++.+.+.++|++.+++|+.| .+.+.+.+.+++.+++.+.|+++||.++..+.++. .
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~ 162 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGV 162 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcc
Confidence 999448999999999987654 68999999999999999995 66677777788888788999999999888876555 8
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.|+++|+|+++|+|+++.||.+.|||||+|+||++.|++
T Consensus 163 ~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 163 AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 999999999999999999999999999999999999998
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=255.76 Aligned_cols=190 Identities=21% Similarity=0.251 Sum_probs=163.5
Q ss_pred cCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++||+++|||| ++|||+++|++|+++|++|++++|+.. ..+..+++.........+++|++|.++++++++++.+++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 67899999997 679999999999999999999887643 333344443332234578999999999999999999998
Q ss_pred CCcccEEEecCCCCCCC----C-CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 93 NGKLNILVNNVGTNIRK----P-TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~----~-~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+++|++|||||..... + +.+.+.++|++.+++|+.+++++++.++|+|+++ .++||++||.++..+.+++..|
T Consensus 83 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y 160 (261)
T PRK08690 83 -DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVM 160 (261)
T ss_pred -CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccc
Confidence 7999999999986432 2 3467889999999999999999999999999765 4899999999998888999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|+|+++|++.++.|++++|||||+|+||+++|+|.+.
T Consensus 161 ~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~ 200 (261)
T PRK08690 161 GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG 200 (261)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc
Confidence 9999999999999999999999999999999999998653
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=258.47 Aligned_cols=192 Identities=26% Similarity=0.317 Sum_probs=173.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh---------hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---------VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~ 85 (218)
+++|+++||||++|||+++|++|+++|++|++++++. +.+++..+++...+..+..+.+|++|.+++++++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 5789999999999999999999999999999998775 5666666666655667888999999999999999
Q ss_pred HHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC------CCeEEEEecCCccC
Q 027816 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG------VGSIVFISSVGGLS 159 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~------~~~iv~~ss~~~~~ 159 (218)
+++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.++. .++||++||.++..
T Consensus 84 ~~~~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~ 162 (286)
T PRK07791 84 DAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ 162 (286)
T ss_pred HHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence 9999998 7999999999987767788999999999999999999999999999997542 36999999999999
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+.++...|+++|+|+++|+++++.|++++|||||+|+|| ++|+|.+..
T Consensus 163 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~ 210 (286)
T PRK07791 163 GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETV 210 (286)
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhh
Confidence 999999999999999999999999999999999999999 899987543
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=260.26 Aligned_cols=191 Identities=23% Similarity=0.263 Sum_probs=164.0
Q ss_pred CccCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC----------C---CeEEEEEeeC--
Q 027816 13 WSLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK----------G---FVVSGSVCDA-- 75 (218)
Q Consensus 13 ~~~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------~---~~v~~~~~D~-- 75 (218)
++++||++||||| ++|||+++|+.|+++|++|++ +|+.++++.....+... + .....+.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4588999999999 899999999999999999988 78877777665544321 1 1145678888
Q ss_pred CC------------------HHHHHHHHHHHHhhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHH
Q 027816 76 AS------------------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (218)
Q Consensus 76 ~~------------------~~~~~~~~~~~~~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~ 135 (218)
++ .++++++++++.+.+ |++|++|||||... .+++.+.+.++|++.+++|+++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~ 162 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ 162 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 33 348999999999998 79999999998543 3678899999999999999999999999
Q ss_pred HHhHHhHhCCCCeEEEEecCCccCcCCCC-chhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccccChhhHH
Q 027816 136 LVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 136 ~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-~~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~t~~~~~ 207 (218)
.++|+|.++ |+||++||.++..+.+++ ..|+++|+|+++|+++|+.|+++ +|||||+|+||+++|+|.+.
T Consensus 163 ~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~ 234 (303)
T PLN02730 163 HFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA 234 (303)
T ss_pred HHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence 999999764 899999999988887765 58999999999999999999986 79999999999999999764
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=252.32 Aligned_cols=196 Identities=25% Similarity=0.407 Sum_probs=180.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||++|||++++++|+++|++|++.+|+.++..+..+++...+..+..+.+|+++.++++++++++.+.
T Consensus 4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (254)
T PRK08085 4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD 83 (254)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999999999999988887777777665667888999999999999999999998
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++++.+++.++||++||..+..+.++...|+++|
T Consensus 84 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (254)
T PRK08085 84 I-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK 162 (254)
T ss_pred c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence 8 689999999998766778889999999999999999999999999999877778999999998888888999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++.++.|++++||++|+|+||+++|++.++.
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~ 199 (254)
T PRK08085 163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKAL 199 (254)
T ss_pred HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhh
Confidence 9999999999999999999999999999999998754
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=253.65 Aligned_cols=199 Identities=34% Similarity=0.490 Sum_probs=179.2
Q ss_pred ccccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHH
Q 027816 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 7 ~~~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
.|.++.+++++|++|||||++|||++++++|+++|++|++++|+ +..++..+.+...+..+..+++|+++.++++++++
T Consensus 5 ~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 83 (258)
T PRK06935 5 KFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVK 83 (258)
T ss_pred hhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 45566677899999999999999999999999999999999988 44555555554445568889999999999999999
Q ss_pred HHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCch
Q 027816 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 87 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~ 166 (218)
++.+.+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++.++||++||..+..+.++...
T Consensus 84 ~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 162 (258)
T PRK06935 84 EALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPA 162 (258)
T ss_pred HHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchh
Confidence 999998 6899999999987767788889999999999999999999999999998887789999999999888888999
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++|++++++++++++|+.++|||||+|+||+++|++.+.
T Consensus 163 Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~ 203 (258)
T PRK06935 163 YTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAP 203 (258)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhh
Confidence 99999999999999999999999999999999999998654
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=254.91 Aligned_cols=188 Identities=18% Similarity=0.225 Sum_probs=163.4
Q ss_pred cCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++||+++||||++ |||+++|++|+++|++|++++|+. +.++..+++......+..+.+|++|.++++++++++.+++
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence 5789999999986 999999999999999999998873 3444455554443456678999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCC-----CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 93 NGKLNILVNNVGTNIRKP-----TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~-----~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+++|++|||||.....+ +.+.+.++|++.+++|+.+++.+.+.+.|.+.+ .++||++||.++..+.+++..|
T Consensus 83 -g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y 159 (262)
T PRK07984 83 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM 159 (262)
T ss_pred -CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchh
Confidence 69999999999754322 456789999999999999999999999887643 3799999999888888899999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|+|+++|+++++.|+++.|||||+|+||+++|+|.+
T Consensus 160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~ 198 (262)
T PRK07984 160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 198 (262)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh
Confidence 999999999999999999999999999999999999754
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=247.29 Aligned_cols=187 Identities=19% Similarity=0.216 Sum_probs=168.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||+++||||++|||++++++|+++|++|++++|+++++++..+++...+.++....+|+++.++++++++++.+.++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 56799999999999999999999999999999999999998888877766566788889999999999999999999983
Q ss_pred CcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhH
Q 027816 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 94 ~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|++|||||.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|+||++||..+. ++...|+++|
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asK 158 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSN 158 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHH
Confidence 3899999999854 345778889999999999999999999999999998653 6899999997543 5578999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+++++|+++++.|++++|||||+|+||+++|+
T Consensus 159 aal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 159 ALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 99999999999999999999999999999997
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=253.34 Aligned_cols=194 Identities=25% Similarity=0.329 Sum_probs=172.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++++|+++||||++|||+++|++|+++|++|++++| +.+..+...+++... +.++..+++|++|.++++++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999988865 555666665555432 45788999999999999999999999
Q ss_pred hcCCcccEEEecCCCCC------CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC
Q 027816 91 KFNGKLNILVNNVGTNI------RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~------~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~ 164 (218)
++ +++|++|||||... ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+.+.++||++||..+..+.+++
T Consensus 84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 162 (260)
T PRK08416 84 DF-DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY 162 (260)
T ss_pred hc-CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence 98 68999999998642 245667889999999999999999999999999988777899999999988888999
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
..|+++|+++++++++|+.|+.++|||||+|+||+++|+|.+.
T Consensus 163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~ 205 (260)
T PRK08416 163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA 205 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh
Confidence 9999999999999999999999999999999999999999664
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-38 Score=252.29 Aligned_cols=194 Identities=29% Similarity=0.411 Sum_probs=174.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.+++++|+++||||++|||+++|++|+++|++|++++|+.+ ..+...+++...+..+..+.+|+++.++++++++++.+
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 82 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA 82 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999998764 34566666655556678889999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC--Cchhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYG 168 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~--~~~Y~ 168 (218)
.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||.++..+.++ ...|+
T Consensus 83 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~ 161 (254)
T PRK06114 83 EL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYN 161 (254)
T ss_pred Hc-CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHH
Confidence 88 7999999999987767788899999999999999999999999999998877789999999988776553 68999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++|+++++++++++.|+.++|||||+|+||+++|+|.+
T Consensus 162 ~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~ 199 (254)
T PRK06114 162 ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNT 199 (254)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccc
Confidence 99999999999999999999999999999999999864
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=251.77 Aligned_cols=199 Identities=30% Similarity=0.485 Sum_probs=182.8
Q ss_pred ccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 9 ~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+...+++++|+++||||+++||++++++|+++|++|++.+|+.++.++..+.+...+.++..+++|+++.++++++++++
T Consensus 2 ~~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (265)
T PRK07097 2 SENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQI 81 (265)
T ss_pred CccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 34566788999999999999999999999999999999999998887777777655567889999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
.+++ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|.+.+.++||++||..+..+.++...|+
T Consensus 82 ~~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 160 (265)
T PRK07097 82 EKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYA 160 (265)
T ss_pred HHhC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHH
Confidence 9998 689999999998877788889999999999999999999999999999887779999999998888888999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++|++++++++++++|+.++||+||+|+||+++|++.++.
T Consensus 161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 200 (265)
T PRK07097 161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPL 200 (265)
T ss_pred HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhh
Confidence 9999999999999999999999999999999999987654
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=250.67 Aligned_cols=195 Identities=29% Similarity=0.412 Sum_probs=173.2
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+.++++||+++||||++|||++++++|+++|++|++++++.. .+..+.+...+..+..+++|+++.++++++++++.+
T Consensus 4 ~~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 4 DAFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 455788999999999999999999999999999998877543 333444444455788899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++...|++
T Consensus 82 ~~-~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 160 (253)
T PRK08993 82 EF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA 160 (253)
T ss_pred Hh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHH
Confidence 88 6999999999987667788899999999999999999999999999997764 589999999999888888899999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+|+|+++++++++.|+.+.||+||+|+||+++|+|.+..
T Consensus 161 sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~ 199 (253)
T PRK08993 161 SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQL 199 (253)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhh
Confidence 999999999999999999999999999999999987643
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=253.63 Aligned_cols=189 Identities=20% Similarity=0.263 Sum_probs=163.2
Q ss_pred ccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
-+++|+++||||+ +|||+++|++|+++|++|++++|++.. .+..+++.........+++|++|.++++++++++.++
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 4578999999997 899999999999999999999887422 2222223222123556899999999999999999999
Q ss_pred cCCcccEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 92 FNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ +++|++|||||... .+++.+.+.++|++.+++|+.+++++++.++|+|.+ .|+||++||.++..+.+++..|
T Consensus 86 ~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y 162 (272)
T PRK08159 86 W-GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVM 162 (272)
T ss_pred c-CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhh
Confidence 8 69999999999764 246678899999999999999999999999999864 3799999999888888999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|+|+.+|+++|+.|+.+.|||||+|+||+++|+|.+
T Consensus 163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~ 201 (272)
T PRK08159 163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS 201 (272)
T ss_pred hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh
Confidence 999999999999999999999999999999999999864
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=256.33 Aligned_cols=195 Identities=23% Similarity=0.319 Sum_probs=178.4
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+..+++||++|||||++|||++++++|+++|++|++++|+.+++++..+++.. ...+..+++|++|.++++++++++.+
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVE 81 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999988877776643 44567778999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+ +++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+. .++||++||.++..+.++...|+++
T Consensus 82 ~~-g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 159 (296)
T PRK05872 82 RF-GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCAS 159 (296)
T ss_pred Hc-CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHH
Confidence 88 689999999999877788899999999999999999999999999998765 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+++++++++++.|+.+.||+|++|+||+++|+|.+..
T Consensus 160 Kaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~ 197 (296)
T PRK05872 160 KAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDA 197 (296)
T ss_pred HHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhc
Confidence 99999999999999999999999999999999998753
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=248.25 Aligned_cols=197 Identities=31% Similarity=0.486 Sum_probs=181.3
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..+++++|++|||||+++||++++++|+++|++|++.+|++++.++..+.+...+..+..+++|++|.++++++++++.+
T Consensus 4 ~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 4 NLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred cccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44567899999999999999999999999999999999999888777777766566788899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+ +++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.++|.+++.++||++||..+..+.++...|+++
T Consensus 84 ~~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s 162 (255)
T PRK07523 84 EI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTAT 162 (255)
T ss_pred hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHH
Confidence 88 78999999999887778888999999999999999999999999999988777899999999888888999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|++++.+++.++.|++++||+||+|+||+++|++.+..
T Consensus 163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~ 200 (255)
T PRK07523 163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL 200 (255)
T ss_pred HHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh
Confidence 99999999999999999999999999999999997654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=247.77 Aligned_cols=195 Identities=31% Similarity=0.391 Sum_probs=178.3
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|+++||||++|||.+++++|+++|++|++++|+.+..+...+++.+.+..+..+++|+++.++++++++++.+.
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER 82 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999999988888777777666667888999999999999999999999
Q ss_pred cCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|++||+||... ..++.+.+.++|++.+++|+.+++.++++++|++.+.+.++|+++||..+..+.++.+.|++|
T Consensus 83 ~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 161 (252)
T PRK07035 83 H-GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSIT 161 (252)
T ss_pred c-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHH
Confidence 8 68999999999653 356678899999999999999999999999999988777899999999998888999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++++++++++++|+.++||+|++|+||+++|++.+.
T Consensus 162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~ 198 (252)
T PRK07035 162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASA 198 (252)
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccc
Confidence 9999999999999999999999999999999998764
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=247.36 Aligned_cols=192 Identities=28% Similarity=0.341 Sum_probs=169.0
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec-CChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh--
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK-- 91 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-- 91 (218)
+++|+++||||++|||++++++|+++|++|++.. |+.+..+....++...+..+..+.+|+++.++++.+++++.+.
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 3589999999999999999999999999998864 5666666666666555566788899999999999998887653
Q ss_pred --cC-CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 92 --FN-GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 92 --~~-~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
++ +++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+. ++||++||.++..+.++..+|+
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~ 159 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN--SRIINISSAATRISLPDFIAYS 159 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC--CeEEEECCcccccCCCCchhHH
Confidence 32 379999999998766677888999999999999999999999999999653 7999999999999989999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+||+++++++++++.|+.+.|||||+|+||+|+|+|.++.
T Consensus 160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~ 199 (252)
T PRK12747 160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAEL 199 (252)
T ss_pred HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhc
Confidence 9999999999999999999999999999999999997643
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=250.05 Aligned_cols=185 Identities=24% Similarity=0.265 Sum_probs=158.4
Q ss_pred cCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCC---hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 15 LKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 15 ~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+++|+++|||| ++|||+++|++|+++|++|++++|. .+..++..+++ + ....+++|++|.++++++++++.
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~Dv~d~~~v~~~~~~~~ 79 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---G-SDLVFPCDVASDEQIDALFASLG 79 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc---C-CcceeeccCCCHHHHHHHHHHHH
Confidence 57899999997 6899999999999999999988654 23333322222 2 23467899999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCC----C-CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC
Q 027816 90 SKFNGKLNILVNNVGTNIRK----P-TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~----~-~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~ 164 (218)
+++ +++|++|||||..... + +.+.+.++|++.+++|+.++++++++++|+|.+ .++||++||..+..+.++.
T Consensus 80 ~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~ 156 (260)
T PRK06997 80 QHW-DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNY 156 (260)
T ss_pred HHh-CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCc
Confidence 998 7999999999975432 2 346788999999999999999999999999943 4799999999988888889
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
..|+++|+|+.+++++|+.|++++|||||+|+||+++|+|.+
T Consensus 157 ~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~ 198 (260)
T PRK06997 157 NTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS 198 (260)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc
Confidence 999999999999999999999999999999999999998754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=249.13 Aligned_cols=182 Identities=30% Similarity=0.415 Sum_probs=167.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||++|||||++|||+++|++|+++|++|++.+|+.+.. ..+..+++|+++.++++++++++.+++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~- 70 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY- 70 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 57899999999999999999999999999999999986432 147788999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+.+.++||++||..+..+.++...|+++|++
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa 150 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHA 150 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHH
Confidence 68999999999877778889999999999999999999999999999988777899999999999888999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++.|+.+. |+||+|+||+++|+|.++.
T Consensus 151 l~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~ 184 (258)
T PRK06398 151 VLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWA 184 (258)
T ss_pred HHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhh
Confidence 999999999999876 9999999999999997653
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=247.05 Aligned_cols=189 Identities=30% Similarity=0.371 Sum_probs=170.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++ +..+..+++|+++.++++++++++.+.+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 78 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF- 78 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 467899999999999999999999999999999999988776665554 3457888999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||...... .+.+.++|++.+++|+.+++++++.++|+|. ++.++||++||.++..+.++...|+++|++
T Consensus 79 g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa 156 (261)
T PRK08265 79 GRVDILVNLACTYLDDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAA 156 (261)
T ss_pred CCCCEEEECCCCCCCCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence 68999999999764433 3578999999999999999999999999997 556899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.++.|+.+.||+||+|+||+++|++.+..
T Consensus 157 ~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~ 191 (261)
T PRK08265 157 IRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDEL 191 (261)
T ss_pred HHHHHHHHHHHhcccCEEEEEEccCCccChhhhhh
Confidence 99999999999999999999999999999997654
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=245.61 Aligned_cols=194 Identities=32% Similarity=0.441 Sum_probs=178.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+..+...+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~- 82 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY- 82 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence 4678999999999999999999999999999999999988777777776656678899999999999999999999988
Q ss_pred CcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||+|.... .++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.++...|+++|+
T Consensus 83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKa 162 (253)
T PRK06172 83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKH 162 (253)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHH
Confidence 689999999997643 4577889999999999999999999999999998877789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++++.|+.+.||+|++|+||+++|++.++.
T Consensus 163 a~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~ 198 (253)
T PRK06172 163 AVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA 198 (253)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence 999999999999999999999999999999998865
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=248.76 Aligned_cols=195 Identities=29% Similarity=0.365 Sum_probs=177.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+.++..+++|+++.+++..+++++.+++
T Consensus 6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (278)
T PRK08277 6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF 85 (278)
T ss_pred eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999888777777776556678899999999999999999999988
Q ss_pred CCcccEEEecCCCCCC---------------CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCc
Q 027816 93 NGKLNILVNNVGTNIR---------------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG 157 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~---------------~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~ 157 (218)
+++|++|||||.... .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+.++||++||..+
T Consensus 86 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~ 164 (278)
T PRK08277 86 -GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA 164 (278)
T ss_pred -CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence 699999999996432 2456788999999999999999999999999998877789999999999
Q ss_pred cCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 158 LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
..+.++...|+++|+++++++++++.|+.+.|||||+|+||+++|++.+..
T Consensus 165 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~ 215 (278)
T PRK08277 165 FTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRAL 215 (278)
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhh
Confidence 999999999999999999999999999999999999999999999987654
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=247.00 Aligned_cols=197 Identities=44% Similarity=0.705 Sum_probs=180.3
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
..+.++||+++||||++|||++++++|+++|++|++++|+.+..++..+++... +.++..+.+|+++.++++++++++
T Consensus 3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (257)
T PRK09242 3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV 82 (257)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 345778999999999999999999999999999999999998887777766544 457888999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
.+.+ +++|++||++|.....++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||.++..+.++...|+
T Consensus 83 ~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~ 161 (257)
T PRK09242 83 EDHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYG 161 (257)
T ss_pred HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchH
Confidence 9998 689999999998666677788999999999999999999999999999887778999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++|++++.++++++.|+.+.||++|+|+||+++|++.++.
T Consensus 162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~ 201 (257)
T PRK09242 162 MTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGP 201 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccc
Confidence 9999999999999999999999999999999999987643
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=249.63 Aligned_cols=194 Identities=27% Similarity=0.311 Sum_probs=173.3
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+...+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. ...+..+++|++|.++++++++.+.+
T Consensus 12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~ 90 (280)
T PLN02253 12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVD 90 (280)
T ss_pred cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999988776666655532 34688899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCC--CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 91 KFNGKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
.+ +++|+||||||.... .++.+.+.++|++.+++|+.++++++++++++|.+++.++||+++|.++..+.++..+|+
T Consensus 91 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~ 169 (280)
T PLN02253 91 KF-GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYT 169 (280)
T ss_pred Hh-CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccH
Confidence 98 789999999997532 356788999999999999999999999999999877778999999999888888888999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++|++++++++.+++|+.++||+||+|+||+++|++..
T Consensus 170 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~ 207 (280)
T PLN02253 170 GSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL 207 (280)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence 99999999999999999999999999999999998753
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=245.56 Aligned_cols=188 Identities=21% Similarity=0.273 Sum_probs=169.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCC-eEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
|+++||||++|||+++|++|+ +|++|++++|+.+++++..+++.+.+. .+..+++|++|.++++++++++.+.+ +++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence 579999999999999999999 599999999999988888777765443 47788999999999999999999888 799
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|++|||||.....+..+.+.+++++.+++|+.+++++++.++|+|.+++ .++||++||.++..+.++...|+++|+|++
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 158 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD 158 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence 9999999986555555677788889999999999999999999997664 589999999999999899999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|+++++.|+.+.||+||+|+||+++|+|.++
T Consensus 159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~ 190 (246)
T PRK05599 159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTG 190 (246)
T ss_pred HHHHHHHHHhcCCCceEEEecCCcccchhhcC
Confidence 99999999999999999999999999998754
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=243.87 Aligned_cols=191 Identities=27% Similarity=0.326 Sum_probs=175.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+++||||++|||++++++|+++|++|++++|+.+..+....++...+..+..+++|+++.++++++++++.+++ +++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999999999888777777766555678889999999999999999999998 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|++|||||.....++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++...|+++|++++
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (256)
T PRK08643 81 NVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR 160 (256)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence 9999999987777788889999999999999999999999999987754 479999999999889889999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.+++.++.|+.+.||+||+|+||+++||+++..
T Consensus 161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~ 193 (256)
T PRK08643 161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDI 193 (256)
T ss_pred HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHH
Confidence 999999999999999999999999999998754
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=247.28 Aligned_cols=187 Identities=21% Similarity=0.160 Sum_probs=161.1
Q ss_pred ccCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCCh--hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+++|+++|||| ++|||+++|++|+++|++|++++|+. +..++..+++. ..+..+++|++|.++++++++++.
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP---EPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC---CCCcEEeCCCCCHHHHHHHHHHHH
Confidence 367899999999 89999999999999999999998764 33344443332 246788999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCc
Q 027816 90 SKFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~ 165 (218)
+.+ +++|++|||||.... .++.+.++++|++.+++|+.+++.+++.++|+|++ .++||++++. +..+.+.+.
T Consensus 81 ~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~-~~~~~~~~~ 156 (256)
T PRK07889 81 EHV-DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD-ATVAWPAYD 156 (256)
T ss_pred HHc-CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec-ccccCCccc
Confidence 988 799999999998643 35677889999999999999999999999999974 3799999865 345567788
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.|++||+|+.+|+++|+.|+.++|||||+|+||+++|+|.+.
T Consensus 157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~ 198 (256)
T PRK07889 157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA 198 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc
Confidence 899999999999999999999999999999999999998754
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=243.79 Aligned_cols=194 Identities=31% Similarity=0.412 Sum_probs=175.6
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+.+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+++...+.++..+.+|+++.++++++++.+.+.
T Consensus 6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 85 (255)
T PRK06113 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK 85 (255)
T ss_pred ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 44678999999999999999999999999999999999988877776666555567888899999999999999999998
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|++|||||.....++ +.+.++|++.+++|+.++++++++++|+|.+.+.++||++||..+..+.++...|+++|
T Consensus 86 ~-~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 163 (255)
T PRK06113 86 L-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK 163 (255)
T ss_pred c-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHH
Confidence 8 689999999997655444 67899999999999999999999999999877778999999999999988999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++++++|+.+.|||||+|+||+++|++.+.
T Consensus 164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~ 199 (255)
T PRK06113 164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS 199 (255)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc
Confidence 999999999999999999999999999999998664
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=253.01 Aligned_cols=194 Identities=21% Similarity=0.297 Sum_probs=179.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++..+++|++|.++++++++++.+++
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~- 83 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL- 83 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC-
Confidence 4678999999999999999999999999999999999988888877777666778899999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.+++++.+++|+.+++++++.++++|.+++.++||++||..+..+.+....|+++|++
T Consensus 84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a 163 (334)
T PRK07109 84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHA 163 (334)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHH
Confidence 68999999999877777888999999999999999999999999999998877999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc--CCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~--~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|+++++.|+.. .+|++++|+||+++||+.+..
T Consensus 164 ~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~ 200 (334)
T PRK07109 164 IRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA 200 (334)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh
Confidence 99999999999975 479999999999999987653
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=243.46 Aligned_cols=191 Identities=30% Similarity=0.417 Sum_probs=170.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||+++||||++|||+++|++|+++|++|++++|+.. ....+.+...+..+..+.+|+++.+++.++++++.+.+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF- 78 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 578999999999999999999999999999999998753 23333333334568889999999999999999998887
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||.....++.+.+.++|++.+++|+.+++++++.++++|.+++ .++||++||..+..+.+....|+++|+
T Consensus 79 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa 158 (248)
T TIGR01832 79 GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH 158 (248)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence 6899999999987767778889999999999999999999999999997664 589999999988888888899999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++++.|+.++||+||+|+||+++|++.+.
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~ 193 (248)
T TIGR01832 159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQA 193 (248)
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhc
Confidence 99999999999999999999999999999998764
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=244.76 Aligned_cols=188 Identities=26% Similarity=0.250 Sum_probs=169.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++++||||++|||++++++|+++|++|++++|+++.+++..+++... ..+..+++|++|.++++++++++.+.+ +++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY-GEVYAVKADLSDKDDLKNLVKEAWELL-GGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCceEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 47999999999999999999999999999999998887777776543 357889999999999999999999988 6899
Q ss_pred EEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhH-hCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 98 ILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 98 ~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~-~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
+||||||... ..++.+.+.++|.+.+++|+.+++.+.+.++|.|. +++.++||++||.++..+.++...|+++|+++
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~ 158 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL 158 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence 9999999753 34567888999999999999999999999999876 34568999999999988888999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++.|+.++||+||+|+||+++|++.+.
T Consensus 159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~ 191 (259)
T PRK08340 159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARE 191 (259)
T ss_pred HHHHHHHHHHhCCCCEEEEEeccCcccCccHHH
Confidence 999999999999999999999999999998764
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=247.93 Aligned_cols=186 Identities=24% Similarity=0.281 Sum_probs=170.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+++||||+||||++++++|+++|++|++++|+.+.++...+ . .+..+.+|++|.++++++++++.+.+++++
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i 77 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGRL 77 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence 6899999999999999999999999999999999877654432 2 366789999999999999999988775789
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|++|||||....+++.+.+.+++++.+++|+.|++.+++.++|+|.+++.++||++||.++..+.++...|+++|+++++
T Consensus 78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 157 (277)
T PRK05993 78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEG 157 (277)
T ss_pred cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence 99999999887788888999999999999999999999999999998888899999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.|+.++||+|++|+||+++|++.++.
T Consensus 158 ~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~ 189 (277)
T PRK05993 158 LSLTLRMELQGSGIHVSLIEPGPIETRFRANA 189 (277)
T ss_pred HHHHHHHHhhhhCCEEEEEecCCccCchhhHH
Confidence 99999999999999999999999999998754
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=243.44 Aligned_cols=194 Identities=30% Similarity=0.398 Sum_probs=175.4
Q ss_pred CccCCcEEEEecCCC-chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGTR-GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 13 ~~~~~k~vlItGa~~-giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..+++|+++||||+| |||++++++|+++|++|++++|+.++++...+++... ...+..+++|+++.++++++++++.
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 456789999999985 9999999999999999999999988877776666442 2467889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|...+ .++||+++|..+..+.++...|+
T Consensus 93 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~ 171 (262)
T PRK07831 93 ERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYA 171 (262)
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchH
Confidence 988 6899999999987667788899999999999999999999999999998765 68999999999988888999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++|+++++++++++.|+.++|||||+|+||+++||+.+.
T Consensus 172 ~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~ 210 (262)
T PRK07831 172 AAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK 210 (262)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccc
Confidence 999999999999999999999999999999999998653
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=243.17 Aligned_cols=192 Identities=29% Similarity=0.294 Sum_probs=170.8
Q ss_pred ccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCC-----------hhhHHHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRN-----------EVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 14 ~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
.++||+++||||+ +|||+++|++|+++|++|++.+|+ .+...+..+++...+..+..+++|+++.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 4679999999999 599999999999999999887532 222334445555556788899999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~ 160 (218)
++++++++.+++ +++|++|||||.....++.+.+.++|++.+++|+.+++.+.+.++|.|.+++.++||++||..+..+
T Consensus 83 i~~~~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 161 (256)
T PRK12859 83 PKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP 161 (256)
T ss_pred HHHHHHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence 999999999988 6899999999987667788999999999999999999999999999998777789999999999988
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.++...|+++|+++++|+++++.|+.++||+||+|+||+++|++..
T Consensus 162 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~ 207 (256)
T PRK12859 162 MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT 207 (256)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC
Confidence 8999999999999999999999999999999999999999999643
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=245.20 Aligned_cols=190 Identities=27% Similarity=0.380 Sum_probs=175.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+||||++++++|+++|++|++++|+.+.+++..+.+. .+..+.+|+++.++++++++++.+.+
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~- 76 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL- 76 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999888776655543 46778999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||.++..+.++...|+++|++
T Consensus 77 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 156 (273)
T PRK07825 77 GPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHA 156 (273)
T ss_pred CCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHH
Confidence 68999999999887778888899999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++.|+.+.||++++|+||+++|++.+..
T Consensus 157 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~ 191 (273)
T PRK07825 157 VVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT 191 (273)
T ss_pred HHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence 99999999999999999999999999999987654
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=241.70 Aligned_cols=190 Identities=28% Similarity=0.358 Sum_probs=171.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|+++||||++|||++++++|+++|++|++++|+.++.+...+++... ...+..+.+|+++.+++++++++.
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~---- 79 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA---- 79 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh----
Confidence 467899999999999999999999999999999999988877776666543 446788899999999998887654
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||+|.....++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.+++..|+++|+
T Consensus 80 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~ 158 (259)
T PRK06125 80 -GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNA 158 (259)
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHH
Confidence 6899999999987767888999999999999999999999999999998877789999999988888888899999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++++.|+.+.|||||+|+||+++|++.++.
T Consensus 159 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~ 194 (259)
T PRK06125 159 ALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTL 194 (259)
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHH
Confidence 999999999999999999999999999999986654
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=246.94 Aligned_cols=197 Identities=27% Similarity=0.417 Sum_probs=174.9
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+...+++|+++||||+||||+++|++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+
T Consensus 34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 113 (293)
T PRK05866 34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK 113 (293)
T ss_pred CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 44567889999999999999999999999999999999999888877777765556788899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCC--CHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-cCCCCchh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEY--SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIY 167 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~--~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~~~~~~~Y 167 (218)
.+ +++|++|||||.....++.+. +++++++.+++|+.|++.++++++|+|.+.+.++||++||.++.. +.++...|
T Consensus 114 ~~-g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y 192 (293)
T PRK05866 114 RI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVY 192 (293)
T ss_pred Hc-CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchH
Confidence 88 689999999998766555542 467889999999999999999999999888778999999976654 36778899
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|+++++++++++.|+.+.||+|++|+||+++|+|.+..
T Consensus 193 ~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~ 233 (293)
T PRK05866 193 NASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT 233 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc
Confidence 99999999999999999999999999999999999998643
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=243.90 Aligned_cols=195 Identities=26% Similarity=0.302 Sum_probs=173.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-------HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-------LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
.+++|+++||||++|||++++++|+++|++|++++|+.+. ++...+++...+..+..+.+|+++.++++++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 4678999999999999999999999999999999997653 334444454455678889999999999999999
Q ss_pred HHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC--CCC
Q 027816 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--GSG 164 (218)
Q Consensus 87 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--~~~ 164 (218)
++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++|+++||..+..+. ++.
T Consensus 83 ~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 161 (273)
T PRK08278 83 KAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPH 161 (273)
T ss_pred HHHHHh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCc
Confidence 999988 68999999999877777888999999999999999999999999999988777899999998777766 788
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecc-cccChhhHHHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW-YTKTSLVERVM 209 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG-~v~t~~~~~~~ 209 (218)
.+|+++|+++++++++++.|+.++||+||+|+|| +++|++.++..
T Consensus 162 ~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~ 207 (273)
T PRK08278 162 TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLL 207 (273)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcc
Confidence 9999999999999999999999999999999999 68999877653
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=242.45 Aligned_cols=188 Identities=37% Similarity=0.493 Sum_probs=164.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||++|||+++|++|+++|++|++..++.+...+ .+... .+..+.+|+++.++++++++++.+++
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~---~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~- 77 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAK---ELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF- 77 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHH---HHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999887665443222 22222 36778999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-cCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+.. +.++...|+++|+
T Consensus 78 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa 157 (255)
T PRK06463 78 GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKA 157 (255)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHH
Confidence 689999999998766677888999999999999999999999999999877778999999988764 4567788999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++++++++.|+.+.||+||+|+||+++|++..+
T Consensus 158 a~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~ 192 (255)
T PRK06463 158 GIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS 192 (255)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhc
Confidence 99999999999999999999999999999998743
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=251.23 Aligned_cols=190 Identities=27% Similarity=0.331 Sum_probs=162.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
..|++++||||++|||+++|++|+++|++|++++|+++++++..+++... ...+..+.+|+++ ++.+.++++.+.+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~ 128 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI 128 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence 46899999999999999999999999999999999999988887777543 3467888999985 2233344444433
Q ss_pred C-CcccEEEecCCCCCC--CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-c-CCCCchh
Q 027816 93 N-GKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-H-VGSGSIY 167 (218)
Q Consensus 93 ~-~~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~-~~~~~~Y 167 (218)
+ .++|++|||||.... .++.+.+.+++++.+++|+.|++.+++.++|.|.+++.|+||++||.++.. + .|+...|
T Consensus 129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y 208 (320)
T PLN02780 129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVY 208 (320)
T ss_pred cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHH
Confidence 2 257799999998643 457788999999999999999999999999999888889999999998864 3 5788999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++||+++++++++|+.|+.+.||+|++|+||+++|+|.+
T Consensus 209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~ 247 (320)
T PLN02780 209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS 247 (320)
T ss_pred HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence 999999999999999999999999999999999999976
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=241.08 Aligned_cols=196 Identities=31% Similarity=0.473 Sum_probs=180.5
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+.+++|+++||||+++||++++++|+++|++|++++|+++.++...+++...+..+..+.+|+++.+++.++++++.+.
T Consensus 6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (256)
T PRK06124 6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE 85 (256)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999999999999999988877777777655666889999999999999999999998
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++..+|+++|
T Consensus 86 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 164 (256)
T PRK06124 86 H-GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAK 164 (256)
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHH
Confidence 8 689999999998777778889999999999999999999999999999887778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++.++.|+.+.||++++|+||+++|++.+..
T Consensus 165 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~ 201 (256)
T PRK06124 165 QGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAM 201 (256)
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhh
Confidence 9999999999999999999999999999999986543
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=245.89 Aligned_cols=189 Identities=29% Similarity=0.295 Sum_probs=167.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh--hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++|++|||||++|||++++++|+++|++|++.+|+. +..++..+.+...+..+..+.+|+++.++++++++++.+.
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 47789999999999999999999999999999987653 3344444444444556888999999999999999999998
Q ss_pred cCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+. ++||++||..+..+.++..+|+++
T Consensus 126 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~--g~iv~iSS~~~~~~~~~~~~Y~as 202 (294)
T PRK07985 126 L-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG--ASIITTSSIQAYQPSPHLLDYAAT 202 (294)
T ss_pred h-CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC--CEEEEECCchhccCCCCcchhHHH
Confidence 8 69999999999753 3567788999999999999999999999999998653 799999999999888899999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
|++++++++.++.|++++|||||+|+||+++|+|.
T Consensus 203 Kaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~ 237 (294)
T PRK07985 203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ 237 (294)
T ss_pred HHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence 99999999999999999999999999999999985
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=240.53 Aligned_cols=192 Identities=26% Similarity=0.354 Sum_probs=172.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|+++||||+++||+++|++|+++|++|++..|+. +......+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999998888854 44455555565556678889999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++.++++|.+.+ .++||++||..+..+.++...|+++|
T Consensus 84 -g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 162 (261)
T PRK08936 84 -GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASK 162 (261)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHH
Confidence 6899999999987777788889999999999999999999999999998754 58999999999888889999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+|++++++.++.|+.+.||+||+|+||+++|++.+
T Consensus 163 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~ 197 (261)
T PRK08936 163 GGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINA 197 (261)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccc
Confidence 99999999999999999999999999999999865
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=245.48 Aligned_cols=195 Identities=27% Similarity=0.388 Sum_probs=173.3
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
...+++||+++||||++|||+++|++|+++|++|++.+++. +..++..+++...+..+..+++|+++.++++++++++.
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999988754 45566666666666788899999999999999999998
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-------CCeEEEEecCCccCcCC
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-------VGSIVFISSVGGLSHVG 162 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-------~~~iv~~ss~~~~~~~~ 162 (218)
+ + +++|++|||||......+.+.+.++|++.+++|+.++++++++++++|.++. .|+||++||.++..+.+
T Consensus 86 ~-~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 163 (306)
T PRK07792 86 G-L-GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV 163 (306)
T ss_pred H-h-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC
Confidence 8 7 7999999999987777778899999999999999999999999999987531 37999999999998888
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+...|+++|++++++++.++.|+.++||+||+|+|| +.|+|....
T Consensus 164 ~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~ 208 (306)
T PRK07792 164 GQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADV 208 (306)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhh
Confidence 999999999999999999999999999999999999 489887543
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=239.11 Aligned_cols=193 Identities=31% Similarity=0.447 Sum_probs=171.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||++|||++++++|+++|++|++++|+.+ ..+..+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 80 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE- 80 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 467899999999999999999999999999999999875 334444444445567889999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCc-cCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~-~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||.....++.+.+.+++++.+++|+.+++.+++.+++++.+.+.++||++||..+ ..+.++...|+++|+
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~ 160 (263)
T PRK08226 81 GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA 160 (263)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHH
Confidence 6899999999987777788889999999999999999999999999998776789999999877 456678899999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++++.|+.+.||+|++|+||+++|+|.++.
T Consensus 161 a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~ 196 (263)
T PRK08226 161 AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESI 196 (263)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhh
Confidence 999999999999999999999999999999998765
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-36 Score=245.55 Aligned_cols=190 Identities=28% Similarity=0.341 Sum_probs=169.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh--hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++|++|||||++|||++++++|+++|++|++..++.+ ..++..+.+...+.++..+.+|+++.++++++++++.+.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998877543 334455555555667888999999999999999999998
Q ss_pred cCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+ .++||++||..+..+.++...|+++
T Consensus 132 ~-g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~as 208 (300)
T PRK06128 132 L-GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYAST 208 (300)
T ss_pred h-CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHH
Confidence 8 68999999999753 456778899999999999999999999999999864 3699999999999988899999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
|+++++|++.++.|+.++||+||+|+||+++|+|..
T Consensus 209 K~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~ 244 (300)
T PRK06128 209 KAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQP 244 (300)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcc
Confidence 999999999999999999999999999999999853
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-36 Score=242.73 Aligned_cols=194 Identities=25% Similarity=0.358 Sum_probs=176.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||+||||++++++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++.+.+.+
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~- 81 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF- 81 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999888777777766556678889999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC------CeEEEEecCCccCcCCCCchh
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV------GSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~------~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+++|+||||||....+++.+.+.++|++.+++|+.|+++++++++|.|.++.. ++||++||.++..+.++..+|
T Consensus 82 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 161 (287)
T PRK06194 82 GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY 161 (287)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcch
Confidence 68999999999987777888999999999999999999999999999987654 799999999999988999999
Q ss_pred hhhHHHHHHHHHHHHHHhcc--CCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~--~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|++++++++.++.|+.. .+||+++|+||+++|++.+..
T Consensus 162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~ 204 (287)
T PRK06194 162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE 204 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc
Confidence 99999999999999999874 479999999999999987654
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=242.02 Aligned_cols=187 Identities=30% Similarity=0.432 Sum_probs=163.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||++|||++++++|+++|++|++++|+.+..++..+. .+..+..+++|+++.++++++++++.+.+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF- 77 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh-
Confidence 46789999999999999999999999999999999998776655432 23457888999999999999999999998
Q ss_pred CcccEEEecCCCCC-CCCCCCCCH----HHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSA----EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~----~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+++|++|||||... ..++.+.+. ++|++.+++|+.++++++++++|+|.+.+ +++|+++|..+..+.++...|+
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~ 156 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYT 156 (262)
T ss_pred CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhH
Confidence 79999999999753 233444433 57999999999999999999999997654 7999999999888888889999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++|++++++++.++.|+++. ||||+|+||+++|+|.+
T Consensus 157 ~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~ 193 (262)
T TIGR03325 157 AAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRG 193 (262)
T ss_pred HHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcc
Confidence 99999999999999999887 99999999999999865
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=238.76 Aligned_cols=188 Identities=30% Similarity=0.423 Sum_probs=165.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||++|||++++++|+++|++|++++|++. .....+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF- 82 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence 467899999999999999999999999999999999853 344555555555678889999999999999999999988
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+.. ++..+|+++|+
T Consensus 83 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~ 160 (260)
T PRK12823 83 GRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKG 160 (260)
T ss_pred CCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHH
Confidence 68999999999643 4567788999999999999999999999999999887778999999987642 34678999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
++++|++.++.|+.++||+||+|+||+++||+.
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 193 (260)
T PRK12823 161 GVNALTASLAFEYAEHGIRVNAVAPGGTEAPPR 193 (260)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCccCCcch
Confidence 999999999999999999999999999999864
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=239.03 Aligned_cols=189 Identities=23% Similarity=0.318 Sum_probs=170.3
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+++||||+||||++++++|+++|++|++++|+.+.++...+++.... ++..+.+|+++.+++.++++++.+++ +++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 4789999999999999999999999999999999888776666554333 78889999999999999999999988 689
Q ss_pred cEEEecCCCCCCCCCC-CCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~-~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|++|||||........ +.+.++|++.+++|+.|++++++.++|.|.+++.++||++||.++..+.+....|+++|++++
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~ 159 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAI 159 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHH
Confidence 9999999976543333 378899999999999999999999999998887899999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.+++.++.|+.++||++++|+||+++|++.+.
T Consensus 160 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (257)
T PRK07024 160 KYLESLRVELRPAGVRVVTIAPGYIRTPMTAH 191 (257)
T ss_pred HHHHHHHHHhhccCcEEEEEecCCCcCchhhc
Confidence 99999999999999999999999999998764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=238.25 Aligned_cols=186 Identities=24% Similarity=0.350 Sum_probs=167.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
||+++||||++|||++++++|+++|++|++++|+.+..++..+.+......+..+++|+++.++++++++++.+.+ +++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence 5899999999999999999999999999999999887777766665545678899999999999999999999988 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|++|||+|.....++.+.+.++|++.+++|+.++++++++++++|.+. ..++||++||.++..+.++..+|+++|++++
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~ 159 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL 159 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence 999999997655677789999999999999999999999999998654 3589999999999888888899999999999
Q ss_pred HHHHHHHHHhcc-CCeEEEEeecccccCh
Q 027816 176 QLTRNLACEWAK-DNIRTNSVAPWYTKTS 203 (218)
Q Consensus 176 ~~~~~l~~e~~~-~gv~v~~v~PG~v~t~ 203 (218)
+++++|+.|+.+ +||+||+|+||+++|+
T Consensus 160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 160 AMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred HHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 999999999974 6999999999999963
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=236.71 Aligned_cols=193 Identities=27% Similarity=0.367 Sum_probs=172.5
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++|+++||||++|||++++++|+++|++|++. +++........+++...+..+..+.+|++|.++++++++++.+.+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV- 79 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence 458999999999999999999999999988774 455555555555555555668888999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++.++++++++|.+++.++||++||..+..+.++...|+++|++
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a 159 (246)
T PRK12938 80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG 159 (246)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence 68999999999876667788999999999999999999999999999988777899999999988888999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.+++|+.+.||++++|+||+++||+.+..
T Consensus 160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~ 194 (246)
T PRK12938 160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI 194 (246)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc
Confidence 99999999999999999999999999999987643
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=264.46 Aligned_cols=195 Identities=26% Similarity=0.356 Sum_probs=180.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
..++++++|||||+||||++++++|+++|++|++++|+.++.++..+.+...+..+..+.+|++|.++++++++++.+.+
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45678899999999999999999999999999999999988888777776666678899999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|++|||||....+++.+.+.++|++.+++|+.|++++++.++|+|.+++ .|+||++||.++..+.++...|+++|
T Consensus 391 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 469 (582)
T PRK05855 391 -GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSK 469 (582)
T ss_pred -CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence 7999999999998777888899999999999999999999999999998765 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++++.|+.+.||+|++|+||+|+|+|.+..
T Consensus 470 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~ 506 (582)
T PRK05855 470 AAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATT 506 (582)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcc
Confidence 9999999999999999999999999999999987754
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=237.20 Aligned_cols=191 Identities=26% Similarity=0.281 Sum_probs=169.3
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.++++++||+++||||+|+||+++|++|+++|++|++++|+.++.....+.+ +..+.++++|+++.++++++++++.
T Consensus 3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~ 79 (255)
T PRK05717 3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVL 79 (255)
T ss_pred CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHH
Confidence 4667888999999999999999999999999999999999877665544433 2357788999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCC--CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 90 SKFNGKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+.+ +++|++|||||.... .++.+.+.++|++.+++|+.+++++++++.|+|.+.. ++||++||..+..+.+...+|
T Consensus 80 ~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-g~ii~~sS~~~~~~~~~~~~Y 157 (255)
T PRK05717 80 GQF-GRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHN-GAIVNLASTRARQSEPDTEAY 157 (255)
T ss_pred HHh-CCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-cEEEEEcchhhcCCCCCCcch
Confidence 988 689999999998643 4667789999999999999999999999999987654 799999999999888899999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|++++++++.++.++.. +|+|++|+||+++|++..
T Consensus 158 ~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~ 195 (255)
T PRK05717 158 AASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPS 195 (255)
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccc
Confidence 99999999999999999976 499999999999998743
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=236.99 Aligned_cols=191 Identities=32% Similarity=0.476 Sum_probs=171.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++.+|++|||||+++||.+++++|+++|++|++++|+.+.. ....++. ...+..+.+|+++.++++++++++.+.+
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 87 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF 87 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 567899999999999999999999999999999999987643 2233332 2346688999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||+|.....++.+.+.++|++.+++|+.+++++++.+.++|.+++.++||++||..+..+.+....|+++|+
T Consensus 88 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 166 (255)
T PRK06841 88 -GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA 166 (255)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence 6899999999987767777889999999999999999999999999998877789999999999899999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++++.|+.+.||+||+|+||+++|++.++
T Consensus 167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~ 201 (255)
T PRK06841 167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKK 201 (255)
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccc
Confidence 99999999999999999999999999999998653
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=237.17 Aligned_cols=193 Identities=32% Similarity=0.419 Sum_probs=175.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+.+++|++|||||+||||++++++|+++|++|++++|+.+..++..+.+...+..+..+.+|+++.+++.++++++.+.+
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999888777777665555678888999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-CCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+|||+||.....++.+.+.+++++.+++|+.+++.+.+++.++|.+ .+.++||++||.++..+.++..+|+++|
T Consensus 86 -~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 164 (263)
T PRK07814 86 -GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAK 164 (263)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHH
Confidence 68999999999876667788899999999999999999999999999976 4568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++++++++.|+.+ +|++++|+||+++|++.+.
T Consensus 165 ~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~ 199 (263)
T PRK07814 165 AALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEV 199 (263)
T ss_pred HHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhh
Confidence 9999999999999987 6999999999999998653
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=235.42 Aligned_cols=192 Identities=26% Similarity=0.400 Sum_probs=175.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEE-ecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+.+|+++||||+|+||++++++|+++|++|++ ..|+.+..++..+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF- 80 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 45789999999999999999999999998766 5788877777777776666678889999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++++|.+++.++||++||..+..+.+....|+++|++
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a 160 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAA 160 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHH
Confidence 68999999999877778888999999999999999999999999999988877899999998888888889999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++++++.|+.+.||++|+|+||+++|++.+.
T Consensus 161 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~ 194 (250)
T PRK08063 161 LEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH 194 (250)
T ss_pred HHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence 9999999999999999999999999999998764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=239.77 Aligned_cols=187 Identities=34% Similarity=0.440 Sum_probs=165.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||++|||++++++|+++|++|++++|+.+..+...+.+ ...+..+++|+++.++++++++++.+.+
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF- 78 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc-
Confidence 357899999999999999999999999999999999988777665544 2357788999999999999999999988
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHH----HHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEE----YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~----~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+++|++|||||... ..++.+.+.++ |++.+++|+.+++.+++.++|.|.+.+ ++||+++|.++..+.++...|+
T Consensus 79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~ 157 (263)
T PRK06200 79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASG-GSMIFTLSNSSFYPGGGGPLYT 157 (263)
T ss_pred CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcC-CEEEEECChhhcCCCCCCchhH
Confidence 69999999999754 34555666665 889999999999999999999987654 8999999999998888899999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++|++++++++.++.|+++. ||||+|+||+++|+|..
T Consensus 158 ~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~ 194 (263)
T PRK06200 158 ASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRG 194 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcC
Confidence 99999999999999999875 99999999999999864
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=260.58 Aligned_cols=188 Identities=30% Similarity=0.479 Sum_probs=170.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
...||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +..+..+.+|++|.++++++++++.+++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 341 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW- 341 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc-
Confidence 447899999999999999999999999999999999988877766554 2356778999999999999999999998
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|+|. +.++||++||.++..+.++...|+++|+
T Consensus 342 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asKa 419 (520)
T PRK06484 342 GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCASKA 419 (520)
T ss_pred CCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHHHHH
Confidence 79999999999863 35677889999999999999999999999999993 3479999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++|+++++.|+.++|||||+|+||+++|+|.+.
T Consensus 420 al~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 454 (520)
T PRK06484 420 AVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLA 454 (520)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhh
Confidence 99999999999999999999999999999998764
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=236.38 Aligned_cols=190 Identities=26% Similarity=0.345 Sum_probs=172.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||+++||+++|++|+++|++|++++|+.+..++..+.+. ..+..+.+|+++.++++++++++.+.+
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---PAAIAVSLDVTRQDSIDRIVAAAVERF- 78 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---CceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999887776655442 347888999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||.....++.+.+.++|++.+++|+.+++.++++++++|.+++ .++||++||..+..+.++...|+++|+
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 158 (257)
T PRK07067 79 GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKA 158 (257)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHH
Confidence 6899999999987767788889999999999999999999999999987653 479999999988888889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+++.+++|+.++||++|+|+||+++|++.++
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~ 193 (257)
T PRK07067 159 AVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQ 193 (257)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhh
Confidence 99999999999999999999999999999998764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=236.36 Aligned_cols=190 Identities=25% Similarity=0.346 Sum_probs=170.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+|+++||||++|||++++++|+++|++|+++.+ +.+..+...+++...+..+..+.+|+++.++++++++++.+.+ ++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999999999999999999999988754 5555566666665556678899999999999999999999998 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
+|++|||+|.....++.+.+.++|++.+++|+.+++++++++.++|.+++ .++||++||..+..+.++...|+++|+++
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 160 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL 160 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence 99999999987766777889999999999999999999999999986643 47999999999988999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++.++.++||++|+|+||+++|++.+.
T Consensus 161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~ 193 (256)
T PRK12743 161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGM 193 (256)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEeCCccCccccc
Confidence 999999999999999999999999999998653
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=235.89 Aligned_cols=185 Identities=35% Similarity=0.477 Sum_probs=167.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++++|+++||||++|||++++++|+++|++|++++|+.+. ......+..+++|+++.++++++++.+.+.+
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 73 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH 73 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999998754 1123457788999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++.+++.+.++|.++ +.++||++||..+..+.++...|+++|
T Consensus 74 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 152 (252)
T PRK07856 74 -GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK 152 (252)
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence 699999999998776777888999999999999999999999999999865 457999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++|++.++.|+.+. |++|+|+||+++|++.+.
T Consensus 153 ~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~ 187 (252)
T PRK07856 153 AGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSEL 187 (252)
T ss_pred HHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhh
Confidence 99999999999999888 999999999999998764
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=239.54 Aligned_cols=184 Identities=28% Similarity=0.319 Sum_probs=168.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++|+++||||+||||++++++|+++|++|++++|+.++++...+ . .+..+.+|++|.++++++++++.+.+ ++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~--~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~ 74 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----L--GVHPLSLDVTDEASIKAAVDTIIAEE-GR 74 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----C--CCeEEEeeCCCHHHHHHHHHHHHHhc-CC
Confidence 57899999999999999999999999999999999877654322 1 36778999999999999999999987 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|++|||||....+++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|++++
T Consensus 75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~ 154 (273)
T PRK06182 75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE 154 (273)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence 99999999998777888999999999999999999999999999998887789999999988888888889999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++++++.|+.+.||++++|+||+++|++.+
T Consensus 155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 185 (273)
T PRK06182 155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGD 185 (273)
T ss_pred HHHHHHHHHhcccCCEEEEEecCCcccccch
Confidence 9999999999999999999999999999864
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=238.67 Aligned_cols=190 Identities=27% Similarity=0.339 Sum_probs=176.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+||||++++++|+++|++|++++|+.+..+...+++...+..+..+++|+++.++++++++++.+.+ +++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 579999999999999999999999999999999988888777776666678889999999999999999998887 6899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
+||||||....+++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++.+.|+++|++++++
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL 159 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence 99999998877778889999999999999999999999999999887778999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++.|+.+.||++++|+||+++|++.+..
T Consensus 160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~ 190 (270)
T PRK05650 160 SETLLVELADDEIGVHVVCPSFFQTNLLDSF 190 (270)
T ss_pred HHHHHHHhcccCcEEEEEecCccccCccccc
Confidence 9999999999999999999999999987643
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=234.98 Aligned_cols=191 Identities=29% Similarity=0.333 Sum_probs=174.3
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+++|+++||||++|||++++++|+++|++|++++|+++..+...+++...+..+..+.+|+++.++++++++++.+.+ +
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-G 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-C
Confidence 568999999999999999999999999999999999988777777776555678899999999999999999999998 6
Q ss_pred cccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 95 KLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 95 ~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
++|++|||||.... .++.+.+.++|++.+++|+.+++.+++++.++|.+.+ ++||++||..+..+.++...|+++|++
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~~~~~~~~~~~Y~~sK~a 160 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMVLRHSQPKYGAYKMAKGA 160 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechhhccCCCCcchhHHHHHH
Confidence 89999999997543 5677889999999999999999999999999987664 799999999998888999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++.+++.++.|+++.||++++|+||++.||+.+.
T Consensus 161 ~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~ 194 (258)
T PRK07890 161 LLAASQSLATELGPQGIRVNSVAPGYIWGDPLKG 194 (258)
T ss_pred HHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHH
Confidence 9999999999999999999999999999998764
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=236.17 Aligned_cols=191 Identities=32% Similarity=0.358 Sum_probs=170.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++||++|||||+||||++++++|+++|++|++++|+++.. +..+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK08628 3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF 81 (258)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 568899999999999999999999999999999999988766 5555665556678899999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||......+.+.. ++|++.+++|+.+++.+.+.++|++++. .++||++||..+..+.++...|+++|+
T Consensus 82 -~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (258)
T PRK08628 82 -GRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKG 158 (258)
T ss_pred -CCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHH
Confidence 6899999999975544444444 9999999999999999999999988765 479999999999888889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++++.++.|+.++||++|+|+||.++|++.++
T Consensus 159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~ 193 (258)
T PRK08628 159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYEN 193 (258)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHH
Confidence 99999999999999999999999999999998764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=244.41 Aligned_cols=191 Identities=23% Similarity=0.255 Sum_probs=166.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.+++||+++||||++|||+++|++|+++|++|++++|+.++.++..+++... ...+.++.+|+++.++++++++++.+
T Consensus 10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~ 89 (313)
T PRK05854 10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA 89 (313)
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999998888777776543 34688899999999999999999998
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc----------
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------- 160 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---------- 160 (218)
++ +++|++|||||.... +..+.+.++|++.|++|+.|++.+++.++|.|+++ .++||++||.++..+
T Consensus 90 ~~-~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~ 166 (313)
T PRK05854 90 EG-RPIHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWE 166 (313)
T ss_pred hC-CCccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccccc
Confidence 88 699999999997643 33456788999999999999999999999999765 479999999876543
Q ss_pred --CCCCchhhhhHHHHHHHHHHHHHHh--ccCCeEEEEeecccccChhhH
Q 027816 161 --VGSGSIYGATKAAMNQLTRNLACEW--AKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~l~~e~--~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.++...|+.||.++.++++.|++++ ...||+||+|+||+|+|++.+
T Consensus 167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~ 216 (313)
T PRK05854 167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLA 216 (313)
T ss_pred ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccc
Confidence 2456789999999999999999864 457899999999999999874
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=235.88 Aligned_cols=185 Identities=29% Similarity=0.372 Sum_probs=165.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||++|||||++|||++++++|+++|++|++++|+++.. ....+..+++|+++.++++++++++.+.+
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 357899999999999999999999999999999999986531 12347788999999999999999999988
Q ss_pred CCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-CCchhhh
Q 027816 93 NGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSIYGA 169 (218)
Q Consensus 93 ~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~-~~~~Y~~ 169 (218)
+++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.+ +..+|++
T Consensus 76 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~ 154 (260)
T PRK06523 76 -GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAA 154 (260)
T ss_pred -CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHH
Confidence 68999999999642 3456778999999999999999999999999999887778999999998887755 7899999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|++++++++.++.|+.+.||++|+|+||+++|++.+.
T Consensus 155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~ 192 (260)
T PRK06523 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA 192 (260)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHH
Confidence 99999999999999999999999999999999998754
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=236.05 Aligned_cols=190 Identities=24% Similarity=0.292 Sum_probs=173.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+..+|.|+||||.+|+|+.+|++|.++|+.|++...+++..+....+.. ......++.|++++++++++.+-+.++.+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLG 103 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence 4568999999999999999999999999999999988777666665543 45577779999999999999999988764
Q ss_pred -CcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 94 -GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 94 -~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
..+..||||||+. ..++.++.+.+++++.+++|++|++.+++.++|.+++++ ||||++||..+..+.|..++||+||
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~~~p~~g~Y~~SK 182 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRVALPALGPYCVSK 182 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCccCcccccchhhH
Confidence 2589999999965 567889999999999999999999999999999998875 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+|++.|+.++++|+.++||+|..|.||+.+|++..
T Consensus 183 ~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 183 FAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred HHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 99999999999999999999999999999999986
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=244.27 Aligned_cols=190 Identities=20% Similarity=0.215 Sum_probs=151.5
Q ss_pred CccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHH-------------------------hhhCC
Q 027816 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-------------------------WQSKG 65 (218)
Q Consensus 13 ~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-------------------------~~~~~ 65 (218)
.+++||+++|||++ +|||+++|++|+++|++|++.++.+ .++...+. +....
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 46789999999996 9999999999999999999976541 11110000 00000
Q ss_pred CeEEEEEeeCCC--------HHHHHHHHHHHHhhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHH
Q 027816 66 FVVSGSVCDAAS--------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (218)
Q Consensus 66 ~~v~~~~~D~~~--------~~~~~~~~~~~~~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~ 135 (218)
.....+.+|+++ .++++++++++.+++ |++|++|||||... ..++.+.+.++|++.+++|+.|++++++
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~ 161 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS 161 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 011111222222 246899999999999 79999999998753 4678899999999999999999999999
Q ss_pred HHhHHhHhCCCCeEEEEecCCccCcCCCCc-hhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccccChhhH
Q 027816 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGS-IYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 136 ~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~-~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|+|+++ |+||+++|..+..+.++.. .|+++|+|+++|+++|+.|+++ .|||||+|+||+++|+|.+
T Consensus 162 a~~p~m~~~--G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~ 232 (299)
T PRK06300 162 HFGPIMNPG--GSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK 232 (299)
T ss_pred HHHHHhhcC--CeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence 999999753 6899999999888888765 8999999999999999999987 5999999999999999875
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=220.66 Aligned_cols=185 Identities=29% Similarity=0.405 Sum_probs=170.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+.|.+||||||++|||+++|++|.+.|-+|++++|+++.+++...+. ..++...||+.|.++.+++++.+++++
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~- 76 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY- 76 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC-
Confidence 467899999999999999999999999999999999999998876654 457888999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCC--CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 94 GKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~--~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+.++++++|||.-..-.+ .+...++.++.+.+|+.+++++.+.++|++.+++.+.||++||..++.|+...+.||++|
T Consensus 77 P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTK 156 (245)
T COG3967 77 PNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATK 156 (245)
T ss_pred CchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhH
Confidence 689999999998643333 355677888999999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+|++.|+.+|+.++...+|+|.-+.|..|+|+
T Consensus 157 AaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 157 AAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 99999999999999999999999999999997
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=231.88 Aligned_cols=194 Identities=29% Similarity=0.416 Sum_probs=177.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||+|+||++++++|+++|++|++++|+.+......+++. .+..+..+++|++|.++++++++++.+++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~- 79 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW- 79 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999887766666554 34568889999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||+|.....++.+.+.+++++.+++|+.+++.+.+.+++.|++++.++|+++||..+..+.++..+|+.+|++
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a 159 (252)
T PRK06138 80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGA 159 (252)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHH
Confidence 68999999999877777788899999999999999999999999999988877899999999888888899999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++.+++.++.|+.++|+++++|+||++.|++.++..
T Consensus 160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~ 195 (252)
T PRK06138 160 IASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIF 195 (252)
T ss_pred HHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhh
Confidence 999999999999999999999999999999977653
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=233.66 Aligned_cols=189 Identities=27% Similarity=0.301 Sum_probs=165.1
Q ss_pred EEEEecCCCchHHHHHHHHHh----CCCeEEEecCChhhHHHHHHHhhh--CCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 19 TALVTGGTRGIGQATVEELAG----LGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++||||++|||+++|++|++ +|++|++++|+.+.+++..+++.. .+..+..+.+|+++.++++++++++.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 799999999999888887777754 24568889999999999999999998876
Q ss_pred CCc----ccEEEecCCCCCC-C-CCCCC-CHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCccCcCCC
Q 027816 93 NGK----LNILVNNVGTNIR-K-PTIEY-SAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 93 ~~~----id~vv~~ag~~~~-~-~~~~~-~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~~~~~~ 163 (218)
++ .|++|||||.... . ...+. +.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++
T Consensus 82 -g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~ 160 (256)
T TIGR01500 82 -RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG 160 (256)
T ss_pred -ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence 33 3699999997532 1 22333 5789999999999999999999999998652 478999999999989899
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
...|+++|+++++|+++|+.|+.+.||+||+|+||+++|+|.+..
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~ 205 (256)
T TIGR01500 161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQV 205 (256)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHH
Confidence 999999999999999999999999999999999999999998754
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=231.59 Aligned_cols=191 Identities=31% Similarity=0.363 Sum_probs=175.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+|+||.+++++|+++|++|++++|+.+..+...+++...+..+..+.+|+++.++++++++++.+.+ +++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999887777777776666678899999999999999999999988 6899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
+||||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|.+.+ .++||++||..+..+.+....|+++|+++++
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 159 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG 159 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence 999999987777888999999999999999999999999999988764 3799999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++.++.|+.+.||+|++|+||+++|++.+...
T Consensus 160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~ 192 (254)
T TIGR02415 160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEID 192 (254)
T ss_pred HHHHHHHHhcccCeEEEEEecCcccChhhhhhh
Confidence 999999999999999999999999999987654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=235.15 Aligned_cols=182 Identities=38% Similarity=0.532 Sum_probs=164.8
Q ss_pred cCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEEE
Q 027816 24 GGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILV 100 (218)
Q Consensus 24 Ga~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vv 100 (218)
|++ +|||+++|++|+++|++|++++|+.++++...+++... +.. .+++|+++.++++++++++.+.++|++|++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 667 99999999999999999999999999876666665443 333 4999999999999999999999856999999
Q ss_pred ecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 101 NNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 101 ~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
||+|.... .++.+.+.++|++.+++|+.+++.+++++.|+|+++ ++||++||.++..+.+++..|+++|+|+++
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~ 156 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEG 156 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHH
Confidence 99998765 677788999999999999999999999999988776 799999999999999999999999999999
Q ss_pred HHHHHHHHhcc-CCeEEEEeecccccChhhHHHH
Q 027816 177 LTRNLACEWAK-DNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 177 ~~~~l~~e~~~-~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++++++.||++ +|||||+|+||+++|++.+...
T Consensus 157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~ 190 (241)
T PF13561_consen 157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIP 190 (241)
T ss_dssp HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHH
T ss_pred HHHHHHHHhccccCeeeeeecccceeccchhccc
Confidence 99999999999 9999999999999999977653
|
... |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=233.31 Aligned_cols=191 Identities=27% Similarity=0.434 Sum_probs=171.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+||||.+++++|+++|++|++++|+.+..+...+.+......+..+.+|+++.++++++++++.+.+
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~- 84 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF- 84 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5779999999999999999999999999999999999887776666665444456788999999999999999999888
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.++|.+.+++|+.++++++++++|+|.+++ ++||++||.++..+.++...|+++|++
T Consensus 85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~~~~~~~Y~asK~a 163 (264)
T PRK07576 85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKAG 163 (264)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccCCCCccHHHHHHHH
Confidence 6899999999976666778889999999999999999999999999987654 799999999888888899999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeeccccc-ChhhH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTK-TSLVE 206 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~-t~~~~ 206 (218)
+++|+++++.|+.+.||+|++|+||+++ |+..+
T Consensus 164 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~ 197 (264)
T PRK07576 164 VDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMA 197 (264)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecccccCcHHHh
Confidence 9999999999999999999999999997 66443
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=233.01 Aligned_cols=192 Identities=27% Similarity=0.329 Sum_probs=174.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||+|+||++++++|+++|++|++++|+.+..+....++ .....+..+.+|++|.++++++++.+.+ +
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~- 78 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M- 78 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c-
Confidence 457899999999999999999999999999999999988877766665 3345788899999999999999999876 5
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++||+||.....++.+.+.+++++.+++|+.|++++++.++++|.+.+.++||++||..+..+.++...|+++|++
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 158 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA 158 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence 68999999999877677888899999999999999999999999999988877899999999998888899999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.++.|+.+.||+|++|+||+++|++.+..
T Consensus 159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~ 193 (263)
T PRK09072 159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA 193 (263)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcccccchhhh
Confidence 99999999999999999999999999999987653
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=232.62 Aligned_cols=192 Identities=28% Similarity=0.319 Sum_probs=169.5
Q ss_pred ccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCC-----------hhhHHHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 14 SLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRN-----------EVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 14 ~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
++++|++|||||++ |||.+++++|+++|++|++++|+ ........+++...+..+..+.+|+++.++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 46789999999994 99999999999999999999987 222222334444445578899999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~ 160 (218)
+.++++++.+.+ +++|+||||||.....++.+.+.+++++.+++|+.+++++++++++.|.+.+.++||++||..+..+
T Consensus 82 ~~~~~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~ 160 (256)
T PRK12748 82 PNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP 160 (256)
T ss_pred HHHHHHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence 999999999988 6899999999987667788889999999999999999999999999998776789999999988888
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.++...|+++|++++++++.++.|+.+.||+|++|+||+++|++..
T Consensus 161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~ 206 (256)
T PRK12748 161 MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT 206 (256)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence 8889999999999999999999999999999999999999998654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=231.66 Aligned_cols=194 Identities=27% Similarity=0.408 Sum_probs=175.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++.+|+++||||+|+||++++++|+++|++|++++|+.++++...+++.....++..+.+|+++.++++++++++.+.+
T Consensus 5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA 84 (258)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45789999999999999999999999999999999999988877777665555678889999999999999999998888
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--------CCeEEEEecCCccCcCCCC
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--------VGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--------~~~iv~~ss~~~~~~~~~~ 164 (218)
+++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++++.|.++. .+++|++||..+..+.+..
T Consensus 85 -~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~ 163 (258)
T PRK06949 85 -GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQI 163 (258)
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCc
Confidence 7999999999987666777888999999999999999999999999987653 3799999999988888889
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.+|+++|++++.+++.++.|+.++||+|++|+||+++|++.+.
T Consensus 164 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~ 206 (258)
T PRK06949 164 GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHH 206 (258)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchh
Confidence 9999999999999999999999999999999999999998753
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=230.33 Aligned_cols=194 Identities=30% Similarity=0.461 Sum_probs=173.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec-CChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++||||+|+||++++++|+++|++|++.. |+.+..++..+++.+.+.++.++.+|+++.+++.++++++.+.+
T Consensus 3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK12935 3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF 82 (247)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999987765 45555666666665555678999999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||......+.+.+.+++++.+++|+.+++.+++.++|+|.+.+.++||++||..+..+.++...|+++|+
T Consensus 83 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 161 (247)
T PRK12935 83 -GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKA 161 (247)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHH
Confidence 6999999999987766777889999999999999999999999999998777789999999988888889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++.++.|+.+.||+++.|+||+++|++.+..
T Consensus 162 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~ 197 (247)
T PRK12935 162 GMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV 197 (247)
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc
Confidence 999999999999998999999999999999986653
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=234.80 Aligned_cols=187 Identities=27% Similarity=0.335 Sum_probs=171.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+|+++||||+|+||++++++|+++|++|++++|+.+.++...+.+ ...+..+++|+++.++++++++++.+.+ ++
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 77 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GR 77 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 4689999999999999999999999999999999988776554433 2357788999999999999999999888 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|++|||||....+++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||.++..+.++...|+++|++++
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~ 157 (275)
T PRK08263 78 LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE 157 (275)
T ss_pred CCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence 99999999998778888999999999999999999999999999998877789999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++.++.|+.+.|++|+.|+||+++|++..
T Consensus 158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~ 188 (275)
T PRK08263 158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAG 188 (275)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence 9999999999999999999999999999874
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=229.70 Aligned_cols=188 Identities=31% Similarity=0.439 Sum_probs=168.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+.+|+++||||+|+||++++++|+++|++|++++|+.+..+...+++ +..+..+++|+++.+++.++++.+.+.+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF- 78 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 356899999999999999999999999999999999987666555444 3457788999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+. +++|+++|..+..+.+...+|+++|++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~i~~~S~~~~~~~~~~~~Y~~sK~a 156 (249)
T PRK06500 79 GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANP--ASIVLNGSINAHIGMPNSSVYAASKAA 156 (249)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechHhccCCCCccHHHHHHHH
Confidence 689999999998766677788999999999999999999999999998643 689999998888888899999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++++++.|+.++||++++|+||+++||+.+.
T Consensus 157 ~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~ 190 (249)
T PRK06500 157 LLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGK 190 (249)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHh
Confidence 9999999999999999999999999999998764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=228.26 Aligned_cols=194 Identities=30% Similarity=0.408 Sum_probs=177.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+|+||++++++|+++|++|++++|+.++.++..+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL- 82 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4568999999999999999999999999999999999888777766665555678899999999999999999999888
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++||++|....+++.+.++++|++.+++|+.+++++++.+.+++.+++.+++|++||..+..+.++...|+.+|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 162 (239)
T PRK07666 83 GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFG 162 (239)
T ss_pred CCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHH
Confidence 68999999999876667778899999999999999999999999999988877899999999999998899999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.++.|+.+.||++++|+||+++|++....
T Consensus 163 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~ 197 (239)
T PRK07666 163 VLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL 197 (239)
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc
Confidence 99999999999999999999999999999987643
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=231.25 Aligned_cols=190 Identities=23% Similarity=0.261 Sum_probs=170.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+|++|||||+++||++++++|+++|++|++++|+.+..+...+.+... ...+..+.+|+++.++++++++++.+.+ +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-G 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999999999988777666555432 2468899999999999999999999988 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
++|++|||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++ .++||++||..+..+.+...+|+++|++
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa 160 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG 160 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence 899999999988777788899999999999999999999999999998765 5899999998888888888999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccc-cChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYT-KTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v-~t~~~~~ 207 (218)
+++++++++.|+.++||+||+|+||.+ .|++.+.
T Consensus 161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~ 195 (259)
T PRK12384 161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS 195 (259)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh
Confidence 999999999999999999999999974 7777653
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=229.44 Aligned_cols=190 Identities=27% Similarity=0.371 Sum_probs=174.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++|+++||||+|+||++++++|+++|++|++++|+.+..+...+.+......+..+.+|+++.+++.++++.+.+++ ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 46899999999999999999999999999999999888777766665555678889999999999999999999988 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|++|||+|.....++.+.+.+++++.+++|+.+++++++.++++|.+.+.++||++||..+..+.++..+|+.+|++++
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~ 163 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA 163 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence 99999999987666777889999999999999999999999999998877789999999998888888999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.+++.++.|+.+.|+++++|+||+++|++.+
T Consensus 164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~ 194 (241)
T PRK07454 164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWD 194 (241)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence 9999999999999999999999999999865
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=254.07 Aligned_cols=190 Identities=31% Similarity=0.489 Sum_probs=172.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++ +..+..+++|+++.++++++++++.+.+ +
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 78 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF-G 78 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-C
Confidence 46899999999999999999999999999999999988877666554 3456788999999999999999999998 6
Q ss_pred cccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCC-eEEEEecCCccCcCCCCchhhhhH
Q 027816 95 KLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 95 ~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~-~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.+ +||++||..+..+.++...|+++|
T Consensus 79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asK 158 (520)
T PRK06484 79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASK 158 (520)
T ss_pred CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHH
Confidence 8999999999742 3467788999999999999999999999999999876555 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++|+++++.|+.+.||+|++|+||+++|++.+..
T Consensus 159 aal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~ 195 (520)
T PRK06484 159 AAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAEL 195 (520)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhh
Confidence 9999999999999999999999999999999997653
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=233.95 Aligned_cols=187 Identities=24% Similarity=0.274 Sum_probs=169.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+|+++||||+||||++++++|+++|++|++++|+.+..+...+. ....+..+.+|++|.+++.++++++.+.+ ++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~ 78 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GP 78 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence 468999999999999999999999999999999998776554332 23357788999999999999999999888 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|+||||||....++..+.+.++|.+.+++|+.++++++++++|++++.+.++||++||.++..+.++..+|+++|++++
T Consensus 79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~ 158 (277)
T PRK06180 79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE 158 (277)
T ss_pred CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence 99999999987777788899999999999999999999999999998877789999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++++++.|+.++|+++++|+||+++|++..
T Consensus 159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~ 189 (277)
T PRK06180 159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAG 189 (277)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence 9999999999999999999999999998743
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=231.84 Aligned_cols=188 Identities=24% Similarity=0.331 Sum_probs=172.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|++|||||+||||++++++|+++|++|++++|+.+..++..+.+. +..+..+++|+++.++++++++.+.+.+.+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 689999999999999999999999999999999988777766543 346888999999999999999998876337899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
+||||||....+.+.+.+.+++++.+++|+.+++++++++.++|+..+.++||++||..+..+.++...|+.+|++++++
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL 159 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence 99999998877778888999999999999999999999999999888778999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++.|+.+.||++++|+||+++|++.+.
T Consensus 160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~ 189 (260)
T PRK08267 160 TEALDLEWRRHGIRVADVMPLFVDTAMLDG 189 (260)
T ss_pred HHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence 999999999999999999999999998764
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=232.51 Aligned_cols=191 Identities=22% Similarity=0.244 Sum_probs=165.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhh-HHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVE-LNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~-~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+|+++||||++|||+++|++|+++| ++|++++|+.+. +++..+++...+ ..+..+++|++|.++++++++++.+ .
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence 35899999999999999999999995 899999999876 777776665543 3688899999999999999998876 4
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|+|+|..........+.++..+.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+
T Consensus 86 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa 164 (253)
T PRK07904 86 -GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA 164 (253)
T ss_pred -CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence 6899999999975432222234556678899999999999999999999887899999999988888788889999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++.+|+++++.|+.++||+|++|+||+++|++.++.
T Consensus 165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~ 200 (253)
T PRK07904 165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA 200 (253)
T ss_pred HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC
Confidence 999999999999999999999999999999988754
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=228.50 Aligned_cols=195 Identities=25% Similarity=0.311 Sum_probs=171.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCC--HHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAAS--PDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~--~~~~~~~~~~~~~ 90 (218)
.+++|+++||||+||||++++++|+++|++|++++|+.+..+...+++... ...+..+.+|+++ .+++.++++++.+
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999998877776666432 2356677899975 5688888988888
Q ss_pred hcCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 91 KFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
.+++++|++|||||... ..++.+.+.++|.+.+++|+.+++.+++.++|.|.+.+.+++|+++|..+..+.++...|++
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 162 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGA 162 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHH
Confidence 77458999999999753 35678889999999999999999999999999998877789999999999888888899999
Q ss_pred hHHHHHHHHHHHHHHhccC-CeEEEEeecccccChhhHHH
Q 027816 170 TKAAMNQLTRNLACEWAKD-NIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~-gv~v~~v~PG~v~t~~~~~~ 208 (218)
+|++++.+++.++.|+.+. +|||++|+||+++||+..+.
T Consensus 163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~ 202 (239)
T PRK08703 163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS 202 (239)
T ss_pred hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc
Confidence 9999999999999999877 69999999999999987654
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=230.62 Aligned_cols=195 Identities=30% Similarity=0.429 Sum_probs=177.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|++|||||+|+||++++++|+++|++|++++|+++..++..+.+...+..+..+++|+++.++++++++++.+.+
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 82 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF- 82 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 3678999999999999999999999999999999999988888777776666678889999999999999999998887
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHh-HhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL-KASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l-~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.+++++.+++|+.+++.+++.+++.+ +..+.++||++||..+..+.+....|+++|+
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~ 162 (262)
T PRK13394 83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKH 162 (262)
T ss_pred CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence 689999999998776677788899999999999999999999999999 6666789999999988888888899999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++++++.++.++.+.+|++++|+||+++||+.+..+
T Consensus 163 a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~ 199 (262)
T PRK13394 163 GLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQI 199 (262)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhh
Confidence 9999999999999989999999999999999876543
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=228.39 Aligned_cols=192 Identities=23% Similarity=0.367 Sum_probs=173.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+|+++||||++|||++++++|+++|++|++++|+.++.+...+.+... +..+..+++|+++.++++++++++.+.+ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-G 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999999999988877766655432 4578889999999999999999999988 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC-CchhhhhHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-GSIYGATKAA 173 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-~~~Y~~sK~a 173 (218)
++|++|||||.....++.+.+.+.+++.+++|+.+++++++.+++.+.+.+.++||++||..+..+.++ ...|+.+|++
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a 160 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG 160 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence 899999999987777777888999999999999999999999999998877789999999988877775 6899999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++++++.++.|+...|+++++|+||+++|++.+...
T Consensus 161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~ 196 (248)
T PRK08251 161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK 196 (248)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc
Confidence 999999999999988999999999999999987643
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=229.74 Aligned_cols=193 Identities=29% Similarity=0.415 Sum_probs=178.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+++|+++||||+|+||++++++|+++|++|++++|+.+..++...++...+..+..+.+|+++.++++++++++.+.+ +
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 80 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-G 80 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 568999999999999999999999999999999999988877777776556678899999999999999999999988 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|+||||||.....++.+.+.+++++.+++|+.+++.+++.+++.|++.+.++||++||..+..+.++...|+++|+++
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~ 160 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL 160 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence 89999999998777777888999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++.++.|+.+.||++++++||+++||+....
T Consensus 161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~ 194 (258)
T PRK12429 161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ 194 (258)
T ss_pred HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh
Confidence 9999999999999999999999999999987654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=229.25 Aligned_cols=194 Identities=30% Similarity=0.387 Sum_probs=177.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||+|+||++++++|+++|++|++++|++++.+...+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 82 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL- 82 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999888877777766555678889999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||+|.....++.+.+.++|++.++.|+.+++.+++.+.+++.+++.+++|++||..+..+.+....|+++|++
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~ 162 (250)
T PRK12939 83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGA 162 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHH
Confidence 68999999999877677788899999999999999999999999999988777899999999888888889999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.++.++.+++|+++.|+||+++|++.+..
T Consensus 163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~ 197 (250)
T PRK12939 163 VIGMTRSLARELGGRGITVNAIAPGLTATEATAYV 197 (250)
T ss_pred HHHHHHHHHHHHhhhCEEEEEEEECCCCCcccccc
Confidence 99999999999999999999999999999987643
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=230.40 Aligned_cols=195 Identities=33% Similarity=0.498 Sum_probs=172.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++++|++|||||+|+||.+++++|+++|++|++++|+.++.+...+++...+..+..+++|++|.++++++++++.+.+
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35678999999999999999999999999999999999888777776665555677889999999999999999999987
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHH-hHhCCCCeEEEEecCCccCcCCC----Cchh
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL-LKASGVGSIVFISSVGGLSHVGS----GSIY 167 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~-l~~~~~~~iv~~ss~~~~~~~~~----~~~Y 167 (218)
+++|++|||||.....+..+.+.+.|++.+++|+.+++++++++.++ |.+++.++||++||..+..+.+. ...|
T Consensus 88 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y 166 (259)
T PRK08213 88 -GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY 166 (259)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence 68999999999866666778899999999999999999999999998 77666689999999877665443 4899
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|++++.+++.+++++.++|++++.|+||+++|++.++.
T Consensus 167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~ 207 (259)
T PRK08213 167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT 207 (259)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh
Confidence 99999999999999999999999999999999999986543
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=228.73 Aligned_cols=193 Identities=28% Similarity=0.413 Sum_probs=176.5
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+++|++|||||+|+||++++++|+++|++|++++|+.+..++..+.+......+..+.+|+++.++++++++++.+.+ +
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~ 79 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-G 79 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 468999999999999999999999999999999999888777766665555668889999999999999999999888 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|++||++|.....++.+.+.++|++.+++|+.+++++++.++++|.+.+.++||++||..+..+.++..+|+.+|+++
T Consensus 80 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~ 159 (250)
T TIGR03206 80 PVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL 159 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence 89999999998766677788899999999999999999999999999887778999999999998889999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+.++++++.++.+.|++++.|+||+++|++....
T Consensus 160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~ 193 (250)
T TIGR03206 160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDI 193 (250)
T ss_pred HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhh
Confidence 9999999999988899999999999999987654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=234.55 Aligned_cols=184 Identities=31% Similarity=0.375 Sum_probs=168.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++|+++||||+||||++++++|+++|++|++++|+.+..+. ...+..+++|++|.++++++++.+.+.+ ++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~ 73 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GR 73 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CC
Confidence 46799999999999999999999999999999998765432 1246788999999999999999999998 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|+||||||....+++.+.+.+++++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+....|+++|++++
T Consensus 74 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 153 (270)
T PRK06179 74 IDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE 153 (270)
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence 99999999998777788889999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++.++.|+.+.||++++|+||+++|++.+..
T Consensus 154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~ 186 (270)
T PRK06179 154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANA 186 (270)
T ss_pred HHHHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence 999999999999999999999999999987643
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=229.05 Aligned_cols=181 Identities=20% Similarity=0.233 Sum_probs=159.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|++|||||++|||++++++|+++|++|++++|+.+...+. +...+ +..+.+|+++.++++++++++.+.+ +++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 75 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDG---LRQAG--AQCIQADFSTNAGIMAFIDELKQHT-DGL 75 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC-CCc
Confidence 57999999999999999999999999999999987654322 22222 5678999999999999999999988 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
|++|||||........+.+.++|++.+++|+.+++.+++.++|.|.+.+ .++||++||..+..+.++...|+++|+++
T Consensus 76 d~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal 155 (236)
T PRK06483 76 RAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL 155 (236)
T ss_pred cEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence 9999999976555556778999999999999999999999999998765 57999999998888888899999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
++|+++++.|+++ +||||+|+||++.|+.
T Consensus 156 ~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~ 184 (236)
T PRK06483 156 DNMTLSFAAKLAP-EVKVNSIAPALILFNE 184 (236)
T ss_pred HHHHHHHHHHHCC-CcEEEEEccCceecCC
Confidence 9999999999987 5999999999998754
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=229.31 Aligned_cols=190 Identities=25% Similarity=0.288 Sum_probs=163.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|+++||||+||||++++++|+++|++|++..+ +.+..+....++ ..++..+++|+++.++++++++++.+.+
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 356899999999999999999999999999887654 444444444333 2457888999999999999999999888
Q ss_pred CCcccEEEecCCCCC------CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCch
Q 027816 93 NGKLNILVNNVGTNI------RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 93 ~~~id~vv~~ag~~~------~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~ 166 (218)
+.++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++++|.+.+.++||+++|..+..+..+..+
T Consensus 79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~ 158 (253)
T PRK08642 79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHD 158 (253)
T ss_pred CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccc
Confidence 434999999998631 24577889999999999999999999999999998777789999999877777777889
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
|+++|++++++++.+++|+.+.|||||+|+||+++|++..
T Consensus 159 Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~ 198 (253)
T PRK08642 159 YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS 198 (253)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh
Confidence 9999999999999999999999999999999999998654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=233.28 Aligned_cols=183 Identities=34% Similarity=0.409 Sum_probs=163.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++++|+++||||++|||++++++|+++|++|++.+++.+... ...+..+++|+++.++++++++++.+.+
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF 75 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999998876432 1257788999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCC---------CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC
Q 027816 93 NGKLNILVNNVGTNIRKP---------TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~---------~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~ 163 (218)
+++|++|||||...... ..+.+.++|++.+++|+.+++++++++.++|.+++.++||++||..+..+.++
T Consensus 76 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 154 (266)
T PRK06171 76 -GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEG 154 (266)
T ss_pred -CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCC
Confidence 69999999999754322 34678999999999999999999999999998877789999999999999899
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeeccccc-Chhh
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK-TSLV 205 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~-t~~~ 205 (218)
...|+++|++++++++.++.|+.+.||+||+|+||+++ |++.
T Consensus 155 ~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~ 197 (266)
T PRK06171 155 QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLR 197 (266)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCc
Confidence 99999999999999999999999999999999999997 6653
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=230.68 Aligned_cols=190 Identities=26% Similarity=0.402 Sum_probs=160.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC----hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN----EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+++|+++||||++|||+++|++|+++|++|+++.++ .+..+...+++...+..+..+++|+++.++++++++++.
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 84 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK 84 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 5678999999999999999999999999986665432 233444455554444568889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEE-ecCCccCcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFI-SSVGGLSHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~-ss~~~~~~~~~~~~Y~ 168 (218)
+++ +++|++|||||.....++.+.+.++|++.+++|+.+++++++++.|+|++. ++++++ ||..+ ...++...|+
T Consensus 85 ~~~-~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~--~~iv~~~ss~~~-~~~~~~~~Y~ 160 (257)
T PRK12744 85 AAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN--GKIVTLVTSLLG-AFTPFYSAYA 160 (257)
T ss_pred Hhh-CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC--CCEEEEecchhc-ccCCCcccch
Confidence 988 689999999998766778888999999999999999999999999988644 577766 44333 3457789999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++|+++++|+++++.|+.+.||+|++|+||+++|++..+
T Consensus 161 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~ 199 (257)
T PRK12744 161 GSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYP 199 (257)
T ss_pred hhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcc
Confidence 999999999999999999999999999999999998643
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=228.28 Aligned_cols=194 Identities=33% Similarity=0.482 Sum_probs=175.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+|+||.+++++|+++|++|++++|+.+..+.....+.. +..+.++.+|+++.++++++++++.+.+
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF- 79 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 46789999999999999999999999999999999998877766666543 4568889999999999999999998888
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+|||++|... ..++.+.+.++|++.+++|+.+++.+++.+++++.+++.++||++||..+..+.++...|+.+|+
T Consensus 80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~ 159 (251)
T PRK07231 80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKG 159 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHH
Confidence 68999999999753 34577889999999999999999999999999998887789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++.+++.++.++++.||++++++||+++|++.+...
T Consensus 160 ~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~ 196 (251)
T PRK07231 160 AVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFM 196 (251)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhh
Confidence 9999999999999988999999999999999877654
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=231.81 Aligned_cols=190 Identities=24% Similarity=0.347 Sum_probs=170.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCC-eEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
|+++||||+||||++++++|+++|++|++++|+.+..++..+++...+. .+...++|+++.++++++++++.+.+ +++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence 5799999999999999999999999999999998887777666654332 34557899999999999999999888 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|++|||+|....+++.+.+.++|++.+++|+.+++.+++.++|.|.++ ..++||++||..+..+.++...|+++|++++
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR 159 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence 999999998776778889999999999999999999999999999764 3579999999988888889999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++.++.|+.++||+|++|+||+++|++.++.
T Consensus 160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~ 192 (272)
T PRK07832 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTV 192 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhcc
Confidence 999999999999999999999999999987653
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=232.08 Aligned_cols=178 Identities=25% Similarity=0.293 Sum_probs=154.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+++|||+ ||||+++|++|+ +|++|++++|+.+.+++..+++...+.++..+++|++|.++++++++++ +.+ +++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~i 77 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GPV 77 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CCC
Confidence 589999998 699999999996 8999999999988877777766655567888999999999999999988 456 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC---------------
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--------------- 161 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--------------- 161 (218)
|++|||||... ..++|++.+++|+.+++++++.++|+|.++ +++|+++|.++..+.
T Consensus 78 d~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~~~~~~~~~~ 148 (275)
T PRK06940 78 TGLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAPG--GAGVVIASQSGHRLPALTAEQERALATTPT 148 (275)
T ss_pred CEEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC--CCEEEEEecccccCcccchhhhcccccccc
Confidence 99999999742 236799999999999999999999999654 678999998776542
Q ss_pred ---------------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 162 ---------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 162 ---------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++...|++||+|++++++.++.|+.+.|||||+|+||+++|+|.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~ 209 (275)
T PRK06940 149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD 209 (275)
T ss_pred ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence 2467899999999999999999999999999999999999998754
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=230.72 Aligned_cols=191 Identities=26% Similarity=0.286 Sum_probs=172.5
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+.+|++|||||+|+||++++++|+++|++|++++|+.+..+...+.+... ...+..+.+|++|.+++++ ++++.+.+
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 35789999999999999999999999999999999988776665554332 3468889999999999999 89888887
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||....+.+.+.+.+++++.+++|+.+++.+++.++|+|++.+.++||++||..+..+.++...|+++|+
T Consensus 80 -~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 158 (280)
T PRK06914 80 -GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKY 158 (280)
T ss_pred -CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHH
Confidence 6899999999987777778889999999999999999999999999998877789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++++.|+.++||++++|+||+++|++.+.
T Consensus 159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 193 (280)
T PRK06914 159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEV 193 (280)
T ss_pred HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhc
Confidence 99999999999999999999999999999998764
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=231.89 Aligned_cols=192 Identities=30% Similarity=0.374 Sum_probs=169.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..+++|++|||||++|||.+++++|+++|++|++++|+.+. .+...+.+...+..+.++.+|+++.++++++++++.+.
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 36778999999999999999999999999999999987543 44444445444567888999999999999999999998
Q ss_pred cCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|+||||||... ..++.+.+.++|.+.+++|+.+++++++++++.|++. ++||++||..+..+.++...|+++
T Consensus 122 ~-~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~--g~iV~isS~~~~~~~~~~~~Y~~s 198 (290)
T PRK06701 122 L-GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG--SAIINTGSITGYEGNETLIDYSAT 198 (290)
T ss_pred c-CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC--CeEEEEecccccCCCCCcchhHHH
Confidence 8 68999999999754 3567788999999999999999999999999988543 699999999999888889999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++++++++++.++.++||||++|+||+++|++.+.
T Consensus 199 K~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~ 235 (290)
T PRK06701 199 KGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS 235 (290)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence 9999999999999999999999999999999997653
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=225.86 Aligned_cols=190 Identities=27% Similarity=0.368 Sum_probs=171.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+|+||++++++|+++|+.|++.+|+.+.+++..+.+ +..+..+.+|+++.++++++++++.+.+
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 78 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL- 78 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 567899999999999999999999999999999999887776655443 2357788999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.++|++.+++|+.+.+++++++.+.+.+++.++||++||..+..+.++...|+++|++
T Consensus 79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a 158 (245)
T PRK12936 79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAG 158 (245)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHH
Confidence 68999999999877677778889999999999999999999999988877667899999999888888999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++.++.++.+.|+++++|+||+++|++.+.
T Consensus 159 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~ 192 (245)
T PRK12936 159 MIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK 192 (245)
T ss_pred HHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence 9999999999999999999999999999998754
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-34 Score=227.23 Aligned_cols=186 Identities=25% Similarity=0.331 Sum_probs=169.3
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++++|++|||||+|+||++++++|+++|++|++++|+. +......+..+++|+++.++++++++++.+.+
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 457889999999999999999999999999999999976 11223457888999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||+|....+++.+.+.++|.+.+++|+.+++.++++++++|++++.++||++||..+..+.++...|+++|+
T Consensus 75 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK08220 75 -GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKA 153 (252)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHH
Confidence 6899999999987777788889999999999999999999999999998877789999999988888888999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++.+++.++.|+.++||+||+|+||+++|++.+..
T Consensus 154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~ 189 (252)
T PRK08220 154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTL 189 (252)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhh
Confidence 999999999999999999999999999999987654
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=231.12 Aligned_cols=182 Identities=24% Similarity=0.346 Sum_probs=165.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+||||++++++|+++|++|++++|+.+..+... .. .+..+.+|+++.++++++++.+.+.+ +++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 74 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEH-GGLD 74 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 68999999999999999999999999999999887655432 22 25678899999999999999998887 6899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
++|||||....+++.+.+.++|++.+++|+.+++.+++.++|.|.+. .++||++||.++..+.+...+|+++|++++.+
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~ 153 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL 153 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence 99999998777778888999999999999999999999999999765 47999999999998888999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++.|+.+.||+|++|+||+++|++.+.
T Consensus 154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~ 183 (274)
T PRK05693 154 SDALRLELAPFGVQVMEVQPGAIASQFASN 183 (274)
T ss_pred HHHHHHHhhhhCeEEEEEecCccccccccc
Confidence 999999999999999999999999998765
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=237.50 Aligned_cols=194 Identities=23% Similarity=0.228 Sum_probs=165.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..+++||+++||||++|||+++|++|+++|++|++++|+.+..++..+++... +..+..+.+|++|.++++++++++.
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 90 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR 90 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999988877666665432 3467888999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC----------
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------- 159 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~---------- 159 (218)
+++ +++|+||||||..... .+.+.++++..+++|+.|++.+++.+++.|++.+.++||++||.++..
T Consensus 91 ~~~-~~iD~li~nAg~~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~ 167 (306)
T PRK06197 91 AAY-PRIDLLINNAGVMYTP--KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQ 167 (306)
T ss_pred hhC-CCCCEEEECCccccCC--CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccC
Confidence 988 6899999999975432 345677899999999999999999999999887778999999976433
Q ss_pred ---cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEe--ecccccChhhHHH
Q 027816 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV--APWYTKTSLVERV 208 (218)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v--~PG~v~t~~~~~~ 208 (218)
+.++..+|++||++++++++.+++++++.|++++++ +||+|+|+|.++.
T Consensus 168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~ 221 (306)
T PRK06197 168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL 221 (306)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence 234457899999999999999999998888777665 6999999987643
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=220.22 Aligned_cols=186 Identities=24% Similarity=0.340 Sum_probs=169.5
Q ss_pred CCcEEEEecCC-CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~-~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+.|.|+||||+ ||||.+++++|+++|+.|+.++|..+...++.... .+.....|+++++++.++..++++.-.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~G 80 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDG 80 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence 46899999998 89999999999999999999999998887765432 2677889999999999999999995448
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|++++|||.....|..|.+.++.++.|++|++|++++++++.. +....+|.||++.|.++..+.|..+.|.+||+|+
T Consensus 81 kld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h-~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAi 159 (289)
T KOG1209|consen 81 KLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSH-FLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAI 159 (289)
T ss_pred ceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHH-HHHHccceEEEecceeEEeccchhhhhhHHHHHH
Confidence 999999999998888999999999999999999999999999984 4444569999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+.+++.|+.|+.++||+|..+-||.|.|+...+
T Consensus 160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k 192 (289)
T KOG1209|consen 160 HAYARTLRLELKPFGVRVINAITGGVATDIADK 192 (289)
T ss_pred HHhhhhcEEeeeccccEEEEecccceecccccC
Confidence 999999999999999999999999999988765
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=222.04 Aligned_cols=188 Identities=30% Similarity=0.414 Sum_probs=166.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh--CCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++++||.+++||+.||||++.+++|++.|..+.++.-+.+..+. ..++++ ...++.+++||+++..++++.++++..
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a-~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA-IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH-HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 36789999999999999999999999999987777766666443 334433 467899999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEEEEecCCccCcCCCCchh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
.+ |.+|++||+||+.. ..+|++.+++|+.|.++-....+|+|.+.. +|-||++||.++..|+|-.+.|
T Consensus 80 ~f-g~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY 150 (261)
T KOG4169|consen 80 TF-GTIDILINGAGILD--------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY 150 (261)
T ss_pred Hh-CceEEEEccccccc--------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence 99 79999999999742 456999999999999999999999998763 4789999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHh--ccCCeEEEEeecccccChhhHHHHh
Q 027816 168 GATKAAMNQLTRNLACEW--AKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~--~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
++||+++.+|+|+++.+. .+.||++++||||++.|++.+.+..
T Consensus 151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~ 195 (261)
T KOG4169|consen 151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDA 195 (261)
T ss_pred hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHh
Confidence 999999999999998874 4569999999999999999998854
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=234.25 Aligned_cols=191 Identities=20% Similarity=0.248 Sum_probs=163.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.+|+++||||++|||++++++|+++| ++|++++|+.++.++..+++......+..+.+|+++.++++++++++.+.+ +
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~ 80 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-R 80 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence 47899999999999999999999999 999999999988877776665445567888999999999999999998887 6
Q ss_pred cccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCccCc-----------
Q 027816 95 KLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSH----------- 160 (218)
Q Consensus 95 ~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~~~----------- 160 (218)
++|++|||||.... .+..+.+.++|++.+++|+.+++++++.++|+|.+++ .++||++||.++...
T Consensus 81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~ 160 (314)
T TIGR01289 81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN 160 (314)
T ss_pred CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence 89999999997532 2334678999999999999999999999999998763 479999999876421
Q ss_pred ----------------------CCCCchhhhhHHHHHHHHHHHHHHhc-cCCeEEEEeecccc-cChhhHH
Q 027816 161 ----------------------VGSGSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYT-KTSLVER 207 (218)
Q Consensus 161 ----------------------~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gv~v~~v~PG~v-~t~~~~~ 207 (218)
..+...|++||++...+++.|++++. +.||+|++|+||+| +|+|.+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~ 231 (314)
T TIGR01289 161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFRE 231 (314)
T ss_pred ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccc
Confidence 12346799999999999999999985 46999999999999 6998753
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=236.28 Aligned_cols=188 Identities=26% Similarity=0.274 Sum_probs=163.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++++|+++||||+||||++++++|+++|++|++++|+.++.++..+++. .+..+.+|++|.++++++++++.+.+
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~ 97 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG 97 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence 46688999999999999999999999999999999999887776655543 26788999999999999999999887
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC------------c
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------H 160 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------~ 160 (218)
+++|+||||||.... ..+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+.. +
T Consensus 98 -~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~ 174 (315)
T PRK06196 98 -RRIDILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG 174 (315)
T ss_pred -CCCCEEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence 689999999997542 2345678899999999999999999999999887768999999975432 2
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.++...|++||++++.+++.++.++.+.||++++|+||+++|++.+.
T Consensus 175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~ 221 (315)
T PRK06196 175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRH 221 (315)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcccc
Confidence 33457899999999999999999999999999999999999998653
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=224.57 Aligned_cols=189 Identities=26% Similarity=0.334 Sum_probs=169.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|+++||||+|+||++++++|+++|++|+++.|+.+ ..+...+++...+.++..+.+|+++.++++++++++.+.+
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999888776543 3455555555556678899999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||.....++.+.+.++|++.+++|+.+++.+++.+++.|.+ .++||++||.++..+.++...|+++|+
T Consensus 82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (245)
T PRK12937 82 -GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKA 158 (245)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHHH
Confidence 68999999999876667788899999999999999999999999998864 369999999988888899999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+++.++++++.|+.+.|+++++|+||+++|+|.
T Consensus 159 a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~ 191 (245)
T PRK12937 159 AVEGLVHVLANELRGRGITVNAVAPGPVATELF 191 (245)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCccCchh
Confidence 999999999999999999999999999999985
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=228.10 Aligned_cols=192 Identities=24% Similarity=0.316 Sum_probs=172.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+.+|+++||||+|+||++++++|+++|++|++++|+.+..+...+++...+..+..+.+|+++.+++.++++++.+.+
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 85 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL- 85 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc-
Confidence 4567899999999999999999999999999999998877766655555545578888999999999999999998887
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....+..+.+.+++++.+++|+.+++++++.+++.+.+++.++||++||..+..+.++...|+++|++
T Consensus 86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 165 (274)
T PRK07775 86 GEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG 165 (274)
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence 68999999999876667778889999999999999999999999999887777899999999888888888999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++++.+++++.+.||++++|+||+++|++..
T Consensus 166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~ 198 (274)
T PRK07775 166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGW 198 (274)
T ss_pred HHHHHHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence 999999999999888999999999999998643
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=217.69 Aligned_cols=187 Identities=33% Similarity=0.389 Sum_probs=169.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++.|+++++||+.-|||++++++|++.|+.|+.++|+++.+.++.++.. ..+.+++.|+++.+.+.+.+...
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v----- 75 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV----- 75 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc-----
Confidence 5689999999999999999999999999999999999999998887643 34889999999888777666655
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHh-HHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~-~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|.+++|||+....++.+++.+++++.|++|+.+.+++.|... .++.++.+|.||++||.++..+..+...||++|+
T Consensus 76 ~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKa 155 (245)
T KOG1207|consen 76 FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKA 155 (245)
T ss_pred CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHH
Confidence 689999999999988899999999999999999999999999844 4555667789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+++++++++.|+++.+||||+|+|-.+.|.|-+.-
T Consensus 156 ALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dn 191 (245)
T KOG1207|consen 156 ALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDN 191 (245)
T ss_pred HHHHHHHHHHHhhCcceeEeeccCCeEEEecccccc
Confidence 999999999999999999999999999999997754
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=224.82 Aligned_cols=188 Identities=26% Similarity=0.333 Sum_probs=166.6
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCC-hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
++||||++|||.++|++|+++|++|++++|+ .+..+...+++.....++..+++|+++.+++++++++..+.+ +++|+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence 5899999999999999999999999888765 445566666665556678899999999999999999988888 68999
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHh-HHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~-~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
++||+|.....++.+.+.++|++.+++|+.++++++++++ |.+++.+.++||++||.++..+.++...|+++|++++++
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 159 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA 159 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence 9999998766677788999999999999999999999875 555555668999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++.|+...||++++|+||+++|+|.++.
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 190 (239)
T TIGR01831 160 TKALAVELAKRKITVNCIAPGLIDTEMLAEV 190 (239)
T ss_pred HHHHHHHHhHhCeEEEEEEEccCccccchhh
Confidence 9999999999999999999999999998753
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=227.12 Aligned_cols=189 Identities=25% Similarity=0.378 Sum_probs=166.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||+++||||+||||.+++++|+++|++|++++|+....+...+++. ...+++|+++.++++++++++.+.+
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY- 77 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 3678999999999999999999999999999999998877665554432 2467899999999999999998887
Q ss_pred CcccEEEecCCCCCC--CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-CCCchhhhh
Q 027816 94 GKLNILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGAT 170 (218)
Q Consensus 94 ~~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-~~~~~Y~~s 170 (218)
+++|++|||||.... .++.+.+.+.|++.+++|+.+++++++.++|+|.+++.++||++||..+..+. ++...|+++
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~s 157 (255)
T PRK06057 78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTAS 157 (255)
T ss_pred CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHH
Confidence 689999999997542 35667889999999999999999999999999987777899999998777765 467889999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|++++++++.++.++.++||++++|+||+++||+.+..
T Consensus 158 Kaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~ 195 (255)
T PRK06057 158 KGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL 195 (255)
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh
Confidence 99999999999999999999999999999999987654
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=225.51 Aligned_cols=189 Identities=25% Similarity=0.246 Sum_probs=166.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+..+|++|||||++|||++++++|+++|++|+++.+ +.+..+...+++...+..+..+.+|++|.+++.++++++.+.+
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL 85 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999999999887665 4455555655555555678889999999999999999999888
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++++++|+.+.+++++++.+++.+...++||+++|..+..+.+.+..|+++|+
T Consensus 86 -~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~ 164 (258)
T PRK09134 86 -GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKA 164 (258)
T ss_pred -CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHH
Confidence 6899999999987767778889999999999999999999999999998776789999999877777777889999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+++++++.+++|+.+. |+|++|+||++.|+.
T Consensus 165 a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~ 195 (258)
T PRK09134 165 ALWTATRTLAQALAPR-IRVNAIGPGPTLPSG 195 (258)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEeecccccCCc
Confidence 9999999999999765 999999999998854
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=224.52 Aligned_cols=190 Identities=30% Similarity=0.367 Sum_probs=168.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||+|+||++++++|+++|++|++++|+.+..+...+++......+..+.+|+++.++++++++++.+.+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 81 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF- 81 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence 4678999999999999999999999999999999999877766666655444567788999999999999999999988
Q ss_pred CcccEEEecCCCCC---CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 94 GKLNILVNNVGTNI---RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 94 ~~id~vv~~ag~~~---~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+++|+||||||... ..++.+.++++|++.+++|+.+++++++++++++...+.++||++||.+++. +...|+++
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~s 158 (250)
T PRK07774 82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLA 158 (250)
T ss_pred CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHH
Confidence 68999999999753 3456678899999999999999999999999999877778999999987654 35789999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++++.+++++++++.+.||+++.|+||+++|++.+.
T Consensus 159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 195 (250)
T PRK07774 159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRT 195 (250)
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccc
Confidence 9999999999999999999999999999999998754
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=224.90 Aligned_cols=193 Identities=32% Similarity=0.460 Sum_probs=170.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++||||+|+||+++|++|+++|++|++. .|+.+..+...+.+...+..+..+.+|++|.+++.++++++.+.+
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999998774 788777666666665545568889999999999999999998876
Q ss_pred C-----CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 93 N-----GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 93 ~-----~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ +++|++||+||.....++.+.+.+.|++.+++|+.+++++++.+++++.+. +++|++||..+..+.++...|
T Consensus 83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~v~~sS~~~~~~~~~~~~Y 160 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE--GRVINISSAEVRLGFTGSIAY 160 (254)
T ss_pred ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC--CEEEEECCHHhcCCCCCCcch
Confidence 2 369999999998777777888999999999999999999999999988654 689999999888888999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|++++++++++++++.+.|+++++|+||+++|++.++.
T Consensus 161 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~ 201 (254)
T PRK12746 161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKL 201 (254)
T ss_pred HhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhh
Confidence 99999999999999999999999999999999999987654
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=226.69 Aligned_cols=193 Identities=27% Similarity=0.319 Sum_probs=172.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++|++|||||+|+||++++++|+++|++|++++|+.+..+...+++... ...+..+.+|+++.++++++++++.+.
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999988776666655432 246788899999999999999999998
Q ss_pred cCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|++|||||... ..++.+.+.++|.+.+++|+.++++++++++++|.+.+.++|+++||..+..+.++..+|+++
T Consensus 84 ~-~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s 162 (276)
T PRK05875 84 H-GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVT 162 (276)
T ss_pred c-CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHH
Confidence 8 68999999999653 356677889999999999999999999999999987777899999999888888888999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++++.+++.++.|+...+|+++.|+||+++|++.+.
T Consensus 163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~ 199 (276)
T PRK05875 163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP 199 (276)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence 9999999999999999999999999999999998754
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=223.77 Aligned_cols=190 Identities=27% Similarity=0.328 Sum_probs=164.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++... ...+.++++|++|.+++.++++++.+.+
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999999988887776666432 3346677999999999999999999988
Q ss_pred CCcccEEEecCCCCC---CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-------
Q 027816 93 NGKLNILVNNVGTNI---RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG------- 162 (218)
Q Consensus 93 ~~~id~vv~~ag~~~---~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~------- 162 (218)
+++|++||||+... ..++.+.+.++|.+.+++|+.+++.++++++|+|++++.++||++||.++..+..
T Consensus 82 -~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~ 160 (256)
T PRK09186 82 -GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT 160 (256)
T ss_pred -CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence 68999999997532 2456788999999999999999999999999999887778999999987654321
Q ss_pred ---CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 163 ---SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 163 ---~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
....|+++|++++++++.++.|+.+.||+|+.|+||+++++..
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~ 206 (256)
T PRK09186 161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP 206 (256)
T ss_pred ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC
Confidence 2246999999999999999999999999999999999987653
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=232.54 Aligned_cols=186 Identities=20% Similarity=0.249 Sum_probs=160.2
Q ss_pred EEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEE
Q 027816 21 LVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (218)
Q Consensus 21 lItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v 99 (218)
+||||++|||++++++|+++| ++|++++|+.+..++..+++......+..+++|+++.++++++++++.+.+ +++|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence 699999999999999999999 999999999888777776665444568888999999999999999998877 689999
Q ss_pred EecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCccCc----------------
Q 027816 100 VNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSH---------------- 160 (218)
Q Consensus 100 v~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~~~---------------- 160 (218)
|||||.... .+..+.+.++|++.|++|+.|++.+++.++|.|.+++ .++||++||.++..+
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 999998543 3566789999999999999999999999999998775 589999999876421
Q ss_pred -------------------CCCCchhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccc-cChhhHH
Q 027816 161 -------------------VGSGSIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYT-KTSLVER 207 (218)
Q Consensus 161 -------------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v-~t~~~~~ 207 (218)
.++...|++||+|...+++.+++++.. .||+|++|+||+| +|+|.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~ 227 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE 227 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence 023467999999988889999999965 6999999999999 7888653
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=223.96 Aligned_cols=192 Identities=28% Similarity=0.376 Sum_probs=173.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|+++||||+++||+.++++|+++|++ |++++|+.+......+.+...+..+..+.+|+++.++++++++.+.+.+
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999998 9999999877766666665555678888999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|++||++|.....++.+.+.++|++.+++|+.+++++++.+++++.++. .+++|++||..+..+.+....|+++|
T Consensus 83 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK 161 (260)
T PRK06198 83 -GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK 161 (260)
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence 6899999999987666777889999999999999999999999999997653 47999999998888888889999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++++++++++.|+.+.+|++++|+||+++|++..
T Consensus 162 ~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~ 196 (260)
T PRK06198 162 GALATLTRNAAYALLRNRIRVNGLNIGWMATEGED 196 (260)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchh
Confidence 99999999999999999999999999999999753
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=223.11 Aligned_cols=188 Identities=30% Similarity=0.446 Sum_probs=168.1
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCC-hhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
++||||+||||++++++|+++|++|++++|+ .+.+++..+.+.... ..+..+++|+++.++++++++++.+.+ +++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 80 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL 80 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence 7999999999999999999999999999998 666666665554332 245567899999999999999999988 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|++|||||.....++.+.+.+++++.+++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|++++.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 99999999877777888899999999999999999999999999988777899999999999888999999999999999
Q ss_pred HHHHHHHHhccCC--eEEEEeecccccChhhHHH
Q 027816 177 LTRNLACEWAKDN--IRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 177 ~~~~l~~e~~~~g--v~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.|+.+.+ |+|+.|+||+++||+.++.
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~ 194 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPI 194 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccCCcchhHH
Confidence 9999999997664 9999999999999998654
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-33 Score=222.55 Aligned_cols=190 Identities=31% Similarity=0.397 Sum_probs=169.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
|+++||||+|+||+++|++|+++|++|++++|+.+. ..............+..+.+|+++.++++++++++.+.+ +++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999999998542 222333333344568889999999999999999999988 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|++|||+|.....++.+.+.++|++.+++|+.+++++++.+++.+++.+.++||++||..+..+.++...|+++|+++++
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 99999999877677788999999999999999999999999999988777899999999998888899999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++.++.|+.+.|+++++|+||+++|++.+..
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~ 193 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIATPMVEQM 193 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccCCcchhhc
Confidence 99999999999999999999999999987643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=253.61 Aligned_cols=194 Identities=26% Similarity=0.397 Sum_probs=175.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
..+++|+++||||+||||++++++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+.+
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 36789999999999999999999999999999999999988888777776666678899999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCC--CHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 93 NGKLNILVNNVGTNIRKPTIEY--SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~--~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+++|++|||||......+.+. ..+++++.+++|+.+++++++.++|+|.+++.++||++||.++..+.++...|+++
T Consensus 447 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 525 (657)
T PRK07201 447 -GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVAS 525 (657)
T ss_pred -CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHH
Confidence 689999999997644443322 36889999999999999999999999988878899999999998888999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++++++++++.|+.+.||+|++|+||+++|+|.++
T Consensus 526 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~ 562 (657)
T PRK07201 526 KAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP 562 (657)
T ss_pred HHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence 9999999999999999999999999999999999764
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=225.99 Aligned_cols=187 Identities=23% Similarity=0.286 Sum_probs=169.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.|++|||||+|+||++++++|+++|++|++++|+.+..+...+.. ...+..+++|++|.++++++++++.+.+ +++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 77 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRI 77 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 378999999999999999999999999999999987766554432 2357888999999999999999988887 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|+||||||....++..+.+.+++++.+++|+.++++++++++|+|++++.++||++||..+..+.++..+|+++|++++.
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (276)
T PRK06482 78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG 157 (276)
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence 99999999887777788889999999999999999999999999988877899999999888888899999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.++.++.++||+++.++||.+.|++.+.
T Consensus 158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~ 188 (276)
T PRK06482 158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAG 188 (276)
T ss_pred HHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence 9999999999999999999999999988653
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=222.52 Aligned_cols=189 Identities=26% Similarity=0.311 Sum_probs=164.3
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|+++||||++|||.+++++|+++|++|+++ .|+.+..+...+++.....++..+++|+++.++++++++++.+.+ ++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GR 80 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CC
Confidence 3689999999999999999999999998775 466666666666665555678899999999999999999998888 68
Q ss_pred ccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEEEEecCCccCcCCC-Cchhhhh
Q 027816 96 LNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGS-GSIYGAT 170 (218)
Q Consensus 96 id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~~~~~-~~~Y~~s 170 (218)
+|++|||||.... .++.+.+.++|++.+++|+.+++.+++.+++.+..++ .++||++||.++..+.+. ..+|+++
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS 160 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence 9999999997643 4567889999999999999999999999999886553 468999999888777654 5789999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
|++++++++.++.++.+.||+|+.|+||+++|++.+
T Consensus 161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~ 196 (248)
T PRK06947 161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA 196 (248)
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence 999999999999999999999999999999999864
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=220.08 Aligned_cols=173 Identities=24% Similarity=0.250 Sum_probs=148.2
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+++||||++|||++++++|+++|++|++++|+.+++++..+++ .+..+++|+++.++++++++++. +++|+
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id~ 72 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLDT 72 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCcE
Confidence 5899999999999999999999999999999988776665543 25577899999999999988764 25899
Q ss_pred EEecCCCCCC------CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 99 LVNNVGTNIR------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 99 vv~~ag~~~~------~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+|||||.... .++.+ +.++|++.+++|+.++++++++++|.|++ .|+||++||.+ .+....|+++|+
T Consensus 73 lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKa 145 (223)
T PRK05884 73 IVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKA 145 (223)
T ss_pred EEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHH
Confidence 9999985211 12333 57899999999999999999999999964 37999999976 355689999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+.+|++.++.|+.++|||||+|+||+++|++.+.
T Consensus 146 al~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~ 180 (223)
T PRK05884 146 ALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG 180 (223)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh
Confidence 99999999999999999999999999999998754
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-33 Score=220.74 Aligned_cols=189 Identities=26% Similarity=0.292 Sum_probs=163.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEec-CChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+|++|||||+++||.+++++|+++|++|+++. |+++..+...+.+...+..+..+.+|+++.++++++++++.+.+ ++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CC
Confidence 57899999999999999999999999988876 44555555555554445567889999999999999999999988 68
Q ss_pred ccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEEEEecCCccCcCCCC-chhhhh
Q 027816 96 LNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSG-SIYGAT 170 (218)
Q Consensus 96 id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~~~~~~-~~Y~~s 170 (218)
+|+||||||.... .++.+.+.++|++.+++|+.+++.+++.+++.|.++. .++||++||.++..+.++. ..|+++
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s 160 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS 160 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence 9999999998643 4567889999999999999999999999999987542 4689999999888877763 679999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
|++++++++.++.|+.++||++++|+||.+.||+..
T Consensus 161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~ 196 (248)
T PRK06123 161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA 196 (248)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence 999999999999999999999999999999999754
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-33 Score=220.00 Aligned_cols=189 Identities=31% Similarity=0.396 Sum_probs=169.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
|++|||||+|+||++++++|+++|++|+++.| +.+..+....++......+..+.+|+++.++++++++++.+.+ +++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999988887 5555555555444445568889999999999999999999888 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|+||||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|++.+.++||++||..+..+.++...|+++|++++.
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~ 159 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG 159 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence 99999999876667778899999999999999999999999999988877899999999988888899999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.++.|+.+.|++++.++||+++|++.+.
T Consensus 160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~ 190 (242)
T TIGR01829 160 FTKALAQEGATKGVTVNTISPGYIATDMVMA 190 (242)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCCCcCccccc
Confidence 9999999999999999999999999998764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=221.70 Aligned_cols=191 Identities=35% Similarity=0.495 Sum_probs=165.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh--HHHHHHHhhhCC-CeEEEEEeeCCC-HHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE--LNKCLKEWQSKG-FVVSGSVCDAAS-PDQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~D~~~-~~~~~~~~~~~~ 89 (218)
.+.+|+++||||++|||+++|++|+++|++|+++.++.+. .+...+...... ..+....+|+++ .++++.+++.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999998888777654 233332222111 367788899998 999999999999
Q ss_pred hhcCCcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC-chh
Q 027816 90 SKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIY 167 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-~~Y 167 (218)
+.+ |++|++++|||.... .++.+.+.++|++.+++|+.+.+.+.+.+.|.+.++ +||++||..+. +.++. ..|
T Consensus 82 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y 156 (251)
T COG1028 82 EEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAY 156 (251)
T ss_pred HHc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchH
Confidence 998 689999999999877 488899999999999999999999999888888733 99999999998 77774 999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++||+|+.+|++.++.|+.++||++++|+||+++|++.+...
T Consensus 157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~ 198 (251)
T COG1028 157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALE 198 (251)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhh
Confidence 999999999999999999999999999999999999998654
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=219.95 Aligned_cols=188 Identities=24% Similarity=0.305 Sum_probs=169.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+|+++||||+||||++++++|+++|++|++++|+.+..+...+++... ...+..+++|+++.++++++++++.+ .
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~ 76 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----L 76 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----c
Confidence 368999999999999999999999999999999988777666655432 45788899999999999999998754 4
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|++|||+|.....++.+.+.+++.+.+++|+.+++++++.+.|+|.+++.++||++||..+..+.++...|+++|++++
T Consensus 77 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 156 (243)
T PRK07102 77 PDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALT 156 (243)
T ss_pred CCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHH
Confidence 69999999987666777889999999999999999999999999998877789999999998888889999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++.++.|+.+.||++++|+||+++|++.++.
T Consensus 157 ~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~ 189 (243)
T PRK07102 157 AFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL 189 (243)
T ss_pred HHHHHHHHHhhccCcEEEEEecCcccChhhhcc
Confidence 999999999999999999999999999987654
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=225.12 Aligned_cols=185 Identities=23% Similarity=0.220 Sum_probs=153.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHH----HHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSGSVCDAASPDQR----EKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~----~~~~~~~~~~ 91 (218)
++++||||++|||++++++|+++|++|++++| +++.++...+++... ...+..+.+|++|.+++ +++++++.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 58999999999999999999999999998765 456666666666432 34566789999999865 5666666677
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCH-----------HHHHHHHHhhhhhHHHHHHHHhHHhHhC------CCCeEEEEec
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSA-----------EEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISS 154 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~-----------~~~~~~~~~nv~~~~~~~~~~~~~l~~~------~~~~iv~~ss 154 (218)
+ +++|+||||||.....++.+.+. ++|.+.+++|+.+++.++++++|+|... ..++|++++|
T Consensus 82 ~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s 160 (267)
T TIGR02685 82 F-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD 160 (267)
T ss_pred c-CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence 7 68999999999765555544333 3588999999999999999999998543 2368999999
Q ss_pred CCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 155 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..+..+.++..+|+++|+++++++++++.|+.+.||+|++|+||+++||
T Consensus 161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 9888888999999999999999999999999999999999999998765
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=222.30 Aligned_cols=190 Identities=27% Similarity=0.388 Sum_probs=166.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|+++||||+|+||++++++|+++|++|++++|+.+ ......+.+......+..+.+|+++.+++.++++++.+.+ ++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 80 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GR 80 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 478999999999999999999999999999987643 4444455554445568889999999999999999999988 68
Q ss_pred ccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC------CCeEEEEecCCccCcCCCCchh
Q 027816 96 LNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG------VGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 96 id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~------~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+|++|||||... ..++.+.+.++|++.+++|+.+++++++.+++.|.++. .++||++||..+..+.++...|
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 160 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEY 160 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCccc
Confidence 999999999753 24567788999999999999999999999999998654 3569999999998888889999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|++++++++.++.|+.++|+++++|+||+++|++.+.
T Consensus 161 ~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~ 200 (256)
T PRK12745 161 CISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP 200 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc
Confidence 9999999999999999999999999999999999998654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=219.35 Aligned_cols=181 Identities=27% Similarity=0.377 Sum_probs=154.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|++|||||+||||++++++|+++|++|+++.+ +.+..++..++. .+..+.+|+++.+++.+.+++ +
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~ 73 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S 73 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence 467899999999999999999999999999888765 444444443332 245678999999988877754 3
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~~sK 171 (218)
+++|++|||||.....+..+.+.++|++.+++|+.+++++++.+.++|.+ .++||++||..+. .+.++...|+++|
T Consensus 74 -~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sK 150 (237)
T PRK12742 74 -GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASK 150 (237)
T ss_pred -CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhH
Confidence 68999999999876666778899999999999999999999999998864 3799999998874 5678889999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++.+++.++.|+.+.||+||+|+||+++|++.+
T Consensus 151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~ 185 (237)
T PRK12742 151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANP 185 (237)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccc
Confidence 99999999999999999999999999999999854
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-33 Score=229.05 Aligned_cols=193 Identities=21% Similarity=0.212 Sum_probs=162.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++.+|+++||||++|||++++++|+++|++|++++|+.++.+...+++......+..+.+|+++.++++++++++.+..
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 81 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG- 81 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC-
Confidence 4468999999999999999999999999999999999988877777764444568889999999999999999977665
Q ss_pred CcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC--CeEEEEecCCccC-----------
Q 027816 94 GKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGLS----------- 159 (218)
Q Consensus 94 ~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~--~~iv~~ss~~~~~----------- 159 (218)
+++|+||||||.... ....+.+.++|++.+++|+.|++++++.++|+|++.+. ++||++||.....
T Consensus 82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~ 161 (322)
T PRK07453 82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA 161 (322)
T ss_pred CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence 689999999997543 23346789999999999999999999999999987653 5999999965421
Q ss_pred ------------------------cCCCCchhhhhHHHHHHHHHHHHHHhc-cCCeEEEEeecccc-cChhhHH
Q 027816 160 ------------------------HVGSGSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYT-KTSLVER 207 (218)
Q Consensus 160 ------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gv~v~~v~PG~v-~t~~~~~ 207 (218)
+..+..+|+.||.+...+++.+++++. ..||++++|+||.| .|++.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~ 235 (322)
T PRK07453 162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN 235 (322)
T ss_pred ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence 012346799999999999999999995 46999999999999 5887654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=219.93 Aligned_cols=184 Identities=24% Similarity=0.368 Sum_probs=164.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++++||||+||||.+++++|+++|++|++++|+.+.++...+.+ +.++..+.+|+++.++++++++++.+.+ +++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 47899999999999999999999999999999988766655443 2357888999999999999999998888 6899
Q ss_pred EEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 98 ILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 98 ~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
++||+||... ..+..+.+.++|++.+++|+.+++.+++.++|++.+++.++||++||..+..+.++...|+++|+++++
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 156 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence 9999999753 346677899999999999999999999999999988777899999999888888889999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+++.++.|+.+.||++++|+||++.|++.
T Consensus 157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~ 185 (248)
T PRK10538 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEF 185 (248)
T ss_pred HHHHHHHHhcCCCcEEEEEeCCeeccccc
Confidence 99999999999999999999999985443
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=219.48 Aligned_cols=195 Identities=28% Similarity=0.362 Sum_probs=172.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCC--CHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAA--SPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~--~~~~~~~~~~~~~~ 90 (218)
.+++|+++||||+++||.+++++|+++|++|++++|+.++.+...+++... ...+..+.+|++ +.+++.++++.+.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999988877776666543 234556667775 78999999999998
Q ss_pred hcCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 91 KFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
.+ +++|+||||||... ..++.+.+.++|++.+++|+.+.+++++.++++|.+++.++||++||..+..+.++..+|++
T Consensus 89 ~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 167 (247)
T PRK08945 89 QF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV 167 (247)
T ss_pred Hh-CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHH
Confidence 88 69999999999753 34667888999999999999999999999999998888889999999998888899999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+|++++.+++.++.++...||++++|+||+++|++.+...
T Consensus 168 sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~ 207 (247)
T PRK08945 168 SKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAF 207 (247)
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhc
Confidence 9999999999999999999999999999999999865543
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=221.57 Aligned_cols=190 Identities=31% Similarity=0.439 Sum_probs=172.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|++|||||+|+||++++++|+++|++|++++|+.+..+...+++...+..+..+.+|+++.++++++++++.+++ +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 4789999999999999999999999999999999887777766666556678889999999999999999999888 689
Q ss_pred cEEEecCCCCCCCCCCCC-CHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEY-SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~-~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|+||||+|.....++.+. +.+++.+.+++|+.+++.+++.+++++.+. .+++|++||..+..+.++...|+++|++++
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~ 158 (263)
T PRK06181 80 DILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALH 158 (263)
T ss_pred CEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHH
Confidence 999999998776677777 899999999999999999999999998765 379999999998888889999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++.++.++.+.++++++++||+++|++.+..
T Consensus 159 ~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~ 191 (263)
T PRK06181 159 GFFDSLRIELADDGVAVTVVCPGFVATDIRKRA 191 (263)
T ss_pred HHHHHHHHHhhhcCceEEEEecCccccCcchhh
Confidence 999999999999999999999999999987754
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=219.09 Aligned_cols=194 Identities=30% Similarity=0.403 Sum_probs=170.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC----ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR----NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
++.+|+++||||+|+||+++|++|+++|++|++++| +.+..++..+++...+..+..+.+|+++.++++++++++.
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 356889999999999999999999999999988665 3444455555555555678899999999999999999998
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHh-HHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~-~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+.+ +++|+||||+|.....++.+.+.++|++.+++|+.+++.+++++. +.+.+++.+++|++||..+..+.++...|+
T Consensus 83 ~~~-~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~ 161 (249)
T PRK12827 83 EEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYA 161 (249)
T ss_pred HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhH
Confidence 887 689999999998776778888999999999999999999999999 666666668999999999988888999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.+|++++.+++.++.|+.+.|+++++|+||+++|++..+.
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~ 201 (249)
T PRK12827 162 ASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA 201 (249)
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc
Confidence 9999999999999999998899999999999999986643
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=219.05 Aligned_cols=192 Identities=26% Similarity=0.357 Sum_probs=168.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++++++||||+|+||.+++++|+++|++|++++|+.++.+...+++...+..+..+++|+++.++++++++.+.+.+
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF- 80 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 3678999999999999999999999999999999999888777777666556678889999999999999999998877
Q ss_pred CcccEEEecCCCCCCCC--------C-CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCC
Q 027816 94 GKLNILVNNVGTNIRKP--------T-IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~--------~-~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~ 163 (218)
+++|+||||+|...... + .+.+.++|.+.+++|+.+++.+.+.+++.|.+. ..+.||++||.. ..+.++
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~ 159 (253)
T PRK08217 81 GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG 159 (253)
T ss_pred CCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC
Confidence 68999999999654322 2 567889999999999999999999999998765 446888888864 457778
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
...|+++|+++++++++|+.|+.+.||++++++||+++|++.++
T Consensus 160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~ 203 (253)
T PRK08217 160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA 203 (253)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence 89999999999999999999999999999999999999998764
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=218.05 Aligned_cols=194 Identities=31% Similarity=0.379 Sum_probs=176.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+|+||++++++|+++|++|++++|+.++.....+.+...+..+..+.+|+++.++++++++++.+.+
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 81 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF- 81 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 3568999999999999999999999999999999999887777766666555678889999999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~~sK~ 172 (218)
+++|+|||++|.....++.+.+.+++++.++.|+.+++.+++.+++.+.+++.++||++||..+. .+.++...|+.+|+
T Consensus 82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~ 161 (251)
T PRK12826 82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKA 161 (251)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHH
Confidence 68999999999877777778899999999999999999999999999987777899999999887 67788899999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++.++.++.+.|++++.|+||.++||+.++.
T Consensus 162 a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~ 197 (251)
T PRK12826 162 GLVGFTRALALELAARNITVNSVHPGGVDTPMAGNL 197 (251)
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc
Confidence 999999999999998999999999999999987644
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=218.35 Aligned_cols=194 Identities=34% Similarity=0.448 Sum_probs=175.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+.+|+++||||+|+||.+++++|+++|++|+++ +|+.+..+...+.+...+..+....+|+++.++++++++++.+.+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999888 998877766666665555668889999999999999999999888
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+|||++|.....++.+.+.+++++.+++|+.+++.+++.+++.+.+++.+++|++||..+..+.+....|+.+|+
T Consensus 82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~ 160 (247)
T PRK05565 82 -GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKG 160 (247)
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHH
Confidence 6899999999987666677889999999999999999999999999998887789999999988888888999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++.+++.++.++...|+++++|+||+++|++.+..
T Consensus 161 a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~ 196 (247)
T PRK05565 161 AVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF 196 (247)
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc
Confidence 999999999999999999999999999999887653
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-32 Score=217.57 Aligned_cols=191 Identities=35% Similarity=0.457 Sum_probs=167.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|++|||||+|+||++++++|+++|++|++..| +.+........+...+..+..+.+|+++.+++.++++++.+.+
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999877665 3444444444444445567788999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....+..+.+.+.+++.+++|+.+.+.+++++.+++++. ++||++||.++..+.++...|+++|+
T Consensus 83 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK~ 159 (252)
T PRK06077 83 -GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG--GAIVNIASVAGIRPAYGLSIYGAMKA 159 (252)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC--cEEEEEcchhccCCCCCchHHHHHHH
Confidence 689999999998766777788899999999999999999999999998653 69999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++.+++|+.+ +++++.|.||+++|++.+..
T Consensus 160 ~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~ 194 (252)
T PRK06077 160 AVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESL 194 (252)
T ss_pred HHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhh
Confidence 999999999999987 89999999999999987543
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=218.68 Aligned_cols=185 Identities=22% Similarity=0.264 Sum_probs=164.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|++|||||+|+||++++++|+++|++|++++|+.+..+...+.....+..+..+.+|+++.+++.+.++ +++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCC
Confidence 5789999999999999999999999999999999877666555554445568888999999998877643 478
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|+||||||....+++.+.+.+++++.+++|+.+++.+++.+++.+.+++.++||++||..+..+.++...|+++|++++.
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~ 154 (257)
T PRK09291 75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA 154 (257)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence 99999999887778888999999999999999999999999999988777899999999888888889999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++.++.++.+.||++++|+||++.|++.+..
T Consensus 155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~ 186 (257)
T PRK09291 155 IAEAMHAELKPFGIQVATVNPGPYLTGFNDTM 186 (257)
T ss_pred HHHHHHHHHHhcCcEEEEEecCcccccchhhh
Confidence 99999999999999999999999999886543
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=213.37 Aligned_cols=163 Identities=25% Similarity=0.323 Sum_probs=148.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++++||||++|||++++++|+++ ++|++++|+.+ .+++|+++.++++++++++ +++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~id 57 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEKV-----GKVD 57 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhc-----CCCC
Confidence 36899999999999999999999 99999998753 2579999999999988764 6899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
++|||||.....++.+.+.++|++.+++|+.+++++++.+.|+|.+. ++|+++||..+..+.++...|+++|+++++|
T Consensus 58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDG--GSFTLTSGILSDEPIPGGASAATVNGALEGF 135 (199)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence 99999998766777888999999999999999999999999999753 7899999999988889999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++++.|+ +.||+||+|+||+++|+|..
T Consensus 136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~~ 163 (199)
T PRK07578 136 VKAAALEL-PRGIRINVVSPTVLTESLEK 163 (199)
T ss_pred HHHHHHHc-cCCeEEEEEcCCcccCchhh
Confidence 99999999 88999999999999999854
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=206.70 Aligned_cols=163 Identities=36% Similarity=0.509 Sum_probs=152.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC--hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN--EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
|+++||||++|||++++++|+++|+ +|++++|+ .+..++..+++...+.++..+++|+++.++++++++++.+.+ +
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence 7899999999999999999999976 78999999 667777888888778999999999999999999999999887 7
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|++|||+|....+++.+.+.++|++.|++|+++++.+.+.++| ++.++||++||..+..+.+++..|+++|+|+
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal 155 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAAL 155 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence 999999999998888888999999999999999999999999998 3468999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 027816 175 NQLTRNLACEW 185 (218)
Q Consensus 175 ~~~~~~l~~e~ 185 (218)
++|++++++|+
T Consensus 156 ~~~~~~la~e~ 166 (167)
T PF00106_consen 156 RGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999996
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=224.26 Aligned_cols=191 Identities=32% Similarity=0.351 Sum_probs=168.5
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh--CCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..++.+++++||||++|||+++|++|+.+|++|++.+|+.++.++..+.+.. ....+...++|+++.+++.++.++..
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999988888888864 35788889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc---------
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--------- 160 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--------- 160 (218)
+.+ +++|++|+|||+..... ..+.|.++.+|.+|++|++.+++.++|.|+.+.++|||++||......
T Consensus 110 ~~~-~~ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~ 186 (314)
T KOG1208|consen 110 KKE-GPLDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGE 186 (314)
T ss_pred hcC-CCccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccch
Confidence 888 79999999999876543 567789999999999999999999999999887799999999775110
Q ss_pred ----CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh-hhH
Q 027816 161 ----VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS-LVE 206 (218)
Q Consensus 161 ----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~-~~~ 206 (218)
......|+.||.+...+++.|++.+.. ||.+++++||.|.|+ +.+
T Consensus 187 ~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 187 KAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred hccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec
Confidence 222345999999999999999999977 999999999999999 444
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=216.73 Aligned_cols=180 Identities=20% Similarity=0.262 Sum_probs=157.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++++||||+||||++++++|+++|++|++++|+++.+++..+. ...+..+++|+++.++++++++++. ..+|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d 73 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP----FIPE 73 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence 6899999999999999999999999999999998776554332 2357788999999999999988763 2479
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
.+++|||.....+..+.+.++|++.+++|+.+++++++.+.|+|.+ .++||++||.++..+.++...|+++|++++++
T Consensus 74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 151 (240)
T PRK06101 74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYF 151 (240)
T ss_pred EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence 9999998654334445789999999999999999999999999854 36899999999999999999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++.++.|+.+.||++++|+||+++|++.+.
T Consensus 152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~ 181 (240)
T PRK06101 152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDK 181 (240)
T ss_pred HHHHHHHHHhcCceEEEEeCCcCCCCCcCC
Confidence 999999999999999999999999998764
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-32 Score=214.01 Aligned_cols=190 Identities=28% Similarity=0.433 Sum_probs=171.0
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+.+++++||||+|+||++++++|+++|++|++++|+.++..+..+.+... ..+..+++|+++.+++.++++++.+.+ +
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 81 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF-G 81 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 56799999999999999999999999999999999988777776666443 568889999999999999999999888 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|+|||++|....+++.+.+.+++++.+++|+.+++.+++++++.+.+ +.++||++||.++..+.++...|+.+|+++
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~ 160 (237)
T PRK07326 82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-GGGYIINISSLAGTNFFAGGAAYNASKFGL 160 (237)
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-CCeEEEEECChhhccCCCCCchHHHHHHHH
Confidence 8999999999877677788899999999999999999999999998843 457999999998888888889999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++.++.|+...|+++++|+||++.|++...
T Consensus 161 ~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~ 193 (237)
T PRK07326 161 VGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGH 193 (237)
T ss_pred HHHHHHHHHHhcccCcEEEEEeeccccCccccc
Confidence 999999999999899999999999999987654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=214.37 Aligned_cols=191 Identities=35% Similarity=0.452 Sum_probs=173.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|++|||||+|+||++++++|+++|++|++++|+.+..+...+.+......+..+.+|+++.++++++++++.+.+ +++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence 4789999999999999999999999999999999887777766665555678889999999999999999998887 579
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|+|||++|.....+..+.+++++++.++.|+.+++.+++.+++.+++.+.+++|++||..+..+.+....|+.+|.+++.
T Consensus 80 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~ 159 (255)
T TIGR01963 80 DILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG 159 (255)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence 99999999876666677889999999999999999999999999988777899999999888888889999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++.++.++.+.+++++.++||++.||+.+..
T Consensus 160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~ 191 (255)
T TIGR01963 160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQ 191 (255)
T ss_pred HHHHHHHHhhhcCeEEEEEecCccccHHHHHH
Confidence 99999999988899999999999999987554
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-32 Score=215.99 Aligned_cols=186 Identities=26% Similarity=0.320 Sum_probs=166.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+++||||+|+||++++++|+++|++|++++|+.+..+...+.+. ...+..+++|+++.+++.+.++++.+++ +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 5799999999999999999999999999999999887776666552 3457889999999999999999999988 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|++||++|.....++.+.+.++|.+.+++|+.+++.+++++++.+.+++.++||++||..+... .+...|+.+|++++.
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~ 157 (257)
T PRK07074 79 DVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH 157 (257)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence 9999999987666777888999999999999999999999999998877789999999766543 466799999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++++.|+.++|++|++++||+++|++..
T Consensus 158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~ 187 (257)
T PRK07074 158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWE 187 (257)
T ss_pred HHHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence 999999999999999999999999999864
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=216.51 Aligned_cols=177 Identities=27% Similarity=0.356 Sum_probs=154.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+++||++++++|+++|++|++++|+.... ....+..+.+|+++. ++++.+.+
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~- 65 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWV- 65 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhh-
Confidence 36789999999999999999999999999999999875431 123577889999877 33444444
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|.+.+++.++||++||..+..+.++...|+++|+
T Consensus 66 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 145 (235)
T PRK06550 66 PSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKH 145 (235)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHH
Confidence 68999999999753 35677889999999999999999999999999998877789999999999988889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++++++.++.|+.+.||++|+|+||+++|++.+
T Consensus 146 a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~ 179 (235)
T PRK06550 146 ALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTA 179 (235)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccc
Confidence 9999999999999999999999999999999864
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=213.07 Aligned_cols=193 Identities=31% Similarity=0.424 Sum_probs=171.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++||||+|+||++++++|+++|++|+++.|+.+ ..+...+++...+..+..+.+|+++.+++.++++++.+.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999977777654 3444555554455678888999999999999999999887
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+|||++|.....+..+.+.+++++.+++|+.+.+.+++.+++.+.+.+.+++|++||..+..+.++...|+++|+
T Consensus 82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~ 160 (248)
T PRK05557 82 -GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKA 160 (248)
T ss_pred -CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHH
Confidence 6899999999987766777888999999999999999999999999998877789999999988888888999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+++.++.++.+.++++++|+||+++|++.+.
T Consensus 161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~ 195 (248)
T PRK05557 161 GVIGFTKSLARELASRGITVNAVAPGFIETDMTDA 195 (248)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence 99999999999999899999999999999988664
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=215.17 Aligned_cols=185 Identities=24% Similarity=0.274 Sum_probs=160.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH-HHhhcC--C
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE-VGSKFN--G 94 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-~~~~~~--~ 94 (218)
++++||||+||||++++++|+++|++|++++|+.+.. . ....+.++..+++|+++.+++++++++ +.+.++ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 4799999999999999999999999999999876531 1 112234688899999999999998877 555442 4
Q ss_pred cccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 95 KLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 95 ~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
++|++|||+|.... .++.+.+.++|++.+++|+.+++.+++.+.+.+.+++.++||++||..+..+.++...|+++|++
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 156 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA 156 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence 78999999997653 56778899999999999999999999999999987777899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.++.+ .+.||++++|+||+++|++.+..
T Consensus 157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~ 190 (243)
T PRK07023 157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQATI 190 (243)
T ss_pred HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHH
Confidence 99999999999 77899999999999999987643
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=240.60 Aligned_cols=189 Identities=27% Similarity=0.320 Sum_probs=170.8
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++++|++|||||+||||++++++|+++|++|++++|+.+..+...+.+... ...+..+++|+++.++++++++++.+
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999988877666665432 23577889999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
.+ +++|++|||||.....++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++||++||..+..+.++...|++
T Consensus 490 ~~-g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~a 568 (676)
T TIGR02632 490 AY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSA 568 (676)
T ss_pred hc-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHH
Confidence 98 6899999999987767788889999999999999999999999999998764 478999999999999899999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccC
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t 202 (218)
+|+++++++++++.|+.+.|||||+|+||.|.|
T Consensus 569 SKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~ 601 (676)
T TIGR02632 569 AKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQ 601 (676)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEECCceec
Confidence 999999999999999999999999999999864
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=213.22 Aligned_cols=193 Identities=34% Similarity=0.510 Sum_probs=171.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+++||||+|+||++++++|+++|++|++++|+.+..+...+..... .+..+.+|+++.++++++++++.+.+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~- 84 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF- 84 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 367899999999999999999999999999999999887766655544322 57888999999999999999999888
Q ss_pred CcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEecCCccCcCCCCchhhhhH
Q 027816 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 94 ~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+|||++|.. ......+.+.++|.+.+++|+.+++++++.+++.+...+. ++|+++||..+..+.+....|+.+|
T Consensus 85 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K 164 (264)
T PRK12829 85 GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASK 164 (264)
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHH
Confidence 6899999999987 4456677889999999999999999999999998877655 6789999988888888889999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++++.+++.++.++...++++++|+||+++|++.+...
T Consensus 165 ~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~ 202 (264)
T PRK12829 165 WAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVI 202 (264)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHh
Confidence 99999999999999888999999999999999987654
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-31 Score=211.37 Aligned_cols=193 Identities=34% Similarity=0.436 Sum_probs=175.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++.+|+++||||+|+||++++++|+++|++|++++|++++.+.....+...+.++..+.+|+++.+++.++++++.+.+
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF- 80 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 4567899999999999999999999999999999999888777666666566678889999999999999999998887
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++||++|.....+..+.+.+++.+.++.|+.+.+++++++.+++.+.+.++||++||..+..+.++...|+.+|.+
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~ 160 (246)
T PRK05653 81 GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAG 160 (246)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHH
Confidence 68999999999877667778889999999999999999999999999988777899999998888888888999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++.+++.+++++.+.++++++|+||.+.+++.+.
T Consensus 161 ~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~ 194 (246)
T PRK05653 161 VIGFTKALALELASRGITVNAVAPGFIDTDMTEG 194 (246)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh
Confidence 9999999999998899999999999999998764
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=213.04 Aligned_cols=178 Identities=28% Similarity=0.331 Sum_probs=159.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+|+++||||+|+||++++++|+++|++|++++|+.+.. . ....+.+|+++.++++++++++.+.+ +
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~D~~~~~~~~~~~~~~~~~~--~ 68 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-----PGELFACDLADIEQTAATLAQINEIH--P 68 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CceEEEeeCCCHHHHHHHHHHHHHhC--C
Confidence 578999999999999999999999999999999987541 0 11357899999999999999998875 5
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|++|||+|.....++.+.+.++|++.+++|+.+++.+.+.++|.|++++.++||++||.. ..+.+....|+++|++++
T Consensus 69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~ 147 (234)
T PRK07577 69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALV 147 (234)
T ss_pred CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHH
Confidence 8999999998777777788999999999999999999999999999888778999999985 346677899999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++.++.|+.+.||++++|+||+++|++.+.
T Consensus 148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~ 179 (234)
T PRK07577 148 GCTRTWALELAEYGITVNAVAPGPIETELFRQ 179 (234)
T ss_pred HHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence 99999999999999999999999999998753
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=211.36 Aligned_cols=188 Identities=27% Similarity=0.298 Sum_probs=164.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEE-ecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
|+++||||+|+||++++++|+++|++|++ ..|+.+..++...++...+..+..+++|++|.++++++++++.+++ +++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence 58999999999999999999999999876 4677776666666665555678889999999999999999998887 689
Q ss_pred cEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEEEEecCCccCcCCC-CchhhhhH
Q 027816 97 NILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGS-GSIYGATK 171 (218)
Q Consensus 97 d~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~~~~~-~~~Y~~sK 171 (218)
|++|||+|.. ...++.+.+.++|+..+++|+.+++++++.+++.+.+.. .++||++||..+..+.++ ...|+++|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK 160 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK 160 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence 9999999975 345667889999999999999999999999999887652 478999999988887765 46899999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++.+++.++.|+.+.|+++++|+||+++||+..
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~ 195 (247)
T PRK09730 161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA 195 (247)
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence 99999999999999999999999999999999754
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=202.65 Aligned_cols=191 Identities=27% Similarity=0.334 Sum_probs=159.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhC-CC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC-
Q 027816 17 GMTALVTGGTRGIGQATVEELAGL-GA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (218)
.|.++||||.+|||..++++|.+. |. +++.++|+.++..+..+........++.+++|+++.+++..+++++.+..+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 466999999999999999999975 55 466677878876444444333467899999999999999999999988742
Q ss_pred CcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-----------CeEEEEecCCccCc-
Q 027816 94 GKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-----------GSIVFISSVGGLSH- 160 (218)
Q Consensus 94 ~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-----------~~iv~~ss~~~~~~- 160 (218)
..+|++++|||.... ....+.+.+.|.+++++|..|++.+.|+++|++++... ..||++||..+..+
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~ 162 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG 162 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence 368999999998754 34456778889999999999999999999999987643 37999998766543
Q ss_pred --CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 161 --VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
..+..+|..||+|+++|+|+++.|+.+.+|-|..+|||||+|+|...
T Consensus 163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~ 211 (249)
T KOG1611|consen 163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK 211 (249)
T ss_pred CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC
Confidence 34568999999999999999999999999999999999999999763
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-31 Score=208.89 Aligned_cols=191 Identities=29% Similarity=0.387 Sum_probs=170.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|++|||||+|+||++++++|+++|++|++++|+.++.....+++... .+....+|++|.++++++++++.+.+
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF- 80 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh-
Confidence 467899999999999999999999999999999999887766655555433 35567799999999999999999988
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+|+|++|.....+..+.+.+++++.+++|+.+++.+++++++++.+++.++||++||..+..+.++...|+++|++
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a 160 (239)
T PRK12828 81 GRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAG 160 (239)
T ss_pred CCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHH
Confidence 68999999999876666777889999999999999999999999999988777899999999888888889999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++.+++.++.++.+.|++++.+.||++.|++.+.
T Consensus 161 ~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~ 194 (239)
T PRK12828 161 VARLTEALAAELLDRGITVNAVLPSIIDTPPNRA 194 (239)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh
Confidence 9999999999998889999999999999997654
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-31 Score=210.81 Aligned_cols=184 Identities=30% Similarity=0.381 Sum_probs=162.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++++|+++||||+|+||+++++.|+++|++|++++|+.++.++..+.. .+..+.+|+++.++++++++..
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~---- 75 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAAA---- 75 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHHh----
Confidence 4578899999999999999999999999999999999987766554432 2456789999999988887763
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|++|||||.....+..+.+.++|++.+++|+.+++.+++++++.+.+.+ .++||++||..+..+.++...|+++|
T Consensus 76 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK 154 (245)
T PRK07060 76 -GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASK 154 (245)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHH
Confidence 6899999999987666677788999999999999999999999999887554 47999999999888888999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++.+++.++.++.+.||++++|+||+++|++.+
T Consensus 155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 189 (245)
T PRK07060 155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA 189 (245)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence 99999999999999989999999999999999865
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-31 Score=212.24 Aligned_cols=187 Identities=22% Similarity=0.208 Sum_probs=159.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC-c
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG-K 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~-~ 95 (218)
|+++||||+||||++++++|+++|++|++++|+. +.++...+ ..+..++.+++|+++.++++++++++.+.++. .
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999999999999986 33332222 22346788899999999999999999877631 1
Q ss_pred c--cEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 96 L--NILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 96 i--d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+|+|... ..++.+.+.++|.+.+++|+.+++.+++.+++++.+. ..++||++||..+..+.++..+|+++|
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK 158 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence 2 27899999753 3567788999999999999999999999999999764 347899999999888999999999999
Q ss_pred HHHHHHHHHHHHHhc--cCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++.++.|++ +.+|+|++|+||+++|++.+.
T Consensus 159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~ 196 (251)
T PRK06924 159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ 196 (251)
T ss_pred HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHH
Confidence 999999999999975 468999999999999998764
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=209.61 Aligned_cols=183 Identities=30% Similarity=0.357 Sum_probs=163.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+++.+|+++||||+|+||+++|++|+++|+ +|++++|+.++.++ ....+..+.+|+++.++++++++..
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~--- 71 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA--- 71 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc---
Confidence 356789999999999999999999999999 99999998876543 2345788899999999998887754
Q ss_pred cCCcccEEEecCCC-CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~-~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+++|+|||++|. ....++.+.+.+++.+.+++|+.+++.+++++.+.+++.+.+++|++||..+..+.++...|+.+
T Consensus 72 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~s 149 (238)
T PRK08264 72 --SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSAS 149 (238)
T ss_pred --CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHH
Confidence 579999999998 55567778899999999999999999999999999987777899999999988888899999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++++.+++.++.++.++|++++++.||.++|++.+.
T Consensus 150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~ 186 (238)
T PRK08264 150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG 186 (238)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc
Confidence 9999999999999999999999999999999998654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=228.81 Aligned_cols=189 Identities=26% Similarity=0.358 Sum_probs=166.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh--hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++|+++||||++|||++++++|+++|++|++++++. +.+.+..+++ ....+.+|+++.++++++++.+.+.
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~ 281 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAER 281 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999998843 2333333322 1346789999999999999999988
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||......+.+.+.++|++.+++|+.+++++.+.+++.+..++.++||++||.++..+.++...|+++|
T Consensus 282 ~-g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asK 360 (450)
T PRK08261 282 H-GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASK 360 (450)
T ss_pred C-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHH
Confidence 8 689999999998877778889999999999999999999999999965555568999999999988889999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++|+++++.|+.+.||++|+|+||+++|+|.++.
T Consensus 361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~ 397 (450)
T PRK08261 361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI 397 (450)
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc
Confidence 9999999999999999999999999999999987653
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=207.51 Aligned_cols=194 Identities=34% Similarity=0.440 Sum_probs=170.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++.+|++|||||+|+||++++++|+++|++|++..|+.+ ..+...+.+......+..+.+|+++.++++++++++.+.+
T Consensus 3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 345689999999999999999999999999877665544 3444444444445668889999999999999999998887
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+.+|++||+||.....++.+.+.+++.+.+++|+.+.+++++.+++++++.+.+++|++||..+..+.++...|+.+|+
T Consensus 83 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~ 161 (249)
T PRK12825 83 -GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKA 161 (249)
T ss_pred -CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHH
Confidence 6899999999987767777888999999999999999999999999998887789999999998888888999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++.++.++.+.|++++.|+||.+.|++..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~ 197 (249)
T PRK12825 162 GLVGLTKALARELAEYGITVNMVAPGDIDTDMKEAT 197 (249)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccc
Confidence 999999999999988899999999999999987653
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-31 Score=209.24 Aligned_cols=181 Identities=24% Similarity=0.338 Sum_probs=154.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+|+||++++++|+++|++|++++|+.+..+... .. ..+....+|++|.++++++++.+.+ +++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id 73 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD 73 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence 68999999999999999999999999999999887654332 21 2466778999999999999988754 4799
Q ss_pred EEEecCCCCCC--CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC---CCCchhhhhHH
Q 027816 98 ILVNNVGTNIR--KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---GSGSIYGATKA 172 (218)
Q Consensus 98 ~vv~~ag~~~~--~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---~~~~~Y~~sK~ 172 (218)
+||||||.... .++.+.+.+++.+.+++|+.+++.+++.+++.+++. .+.++++||..+..+. .+...|+++|+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~ 152 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA 152 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence 99999998633 356678899999999999999999999999998754 3789999987765432 35678999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+++.++.|++++||++|+|+||+++|+|.+.
T Consensus 153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~ 187 (225)
T PRK08177 153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGD 187 (225)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence 99999999999999999999999999999998653
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-31 Score=209.47 Aligned_cols=179 Identities=27% Similarity=0.321 Sum_probs=148.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
|+++||||++|||++++++|+++| ..|++..|+.... .....+..+++|+++.++++++.++ + ++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--------~~~~~~~~~~~Dls~~~~~~~~~~~----~-~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--------FQHDNVQWHALDVTDEAEIKQLSEQ----F-TQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--------cccCceEEEEecCCCHHHHHHHHHh----c-CC
Confidence 579999999999999999999986 5666666654321 1134678889999999998885443 4 68
Q ss_pred ccEEEecCCCCC------CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC---cCCCCch
Q 027816 96 LNILVNNVGTNI------RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---HVGSGSI 166 (218)
Q Consensus 96 id~vv~~ag~~~------~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~---~~~~~~~ 166 (218)
+|++|||||... ..++.+.+.+.|++.+++|+.+++.+++.++|.|.+++.++++++||..+.. +.++...
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~ 147 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS 147 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence 999999999863 2346678889999999999999999999999999887778999998865533 3456789
Q ss_pred hhhhHHHHHHHHHHHHHHhcc--CCeEEEEeecccccChhhHHHH
Q 027816 167 YGATKAAMNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~--~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++|+++++|++.|+.|+.+ .+|+|++|+||+++|+|.++..
T Consensus 148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~ 192 (235)
T PRK09009 148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ 192 (235)
T ss_pred hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh
Confidence 999999999999999999987 5999999999999999977643
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.4e-31 Score=236.05 Aligned_cols=192 Identities=32% Similarity=0.435 Sum_probs=175.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+.||+++||||+|+||++++++|+++|++|++++|+.+..+...+.+... ..+..+.+|+++.++++++++++.+.+
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~- 496 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF- 496 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 467899999999999999999999999999999999998877776665443 468889999999999999999999888
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|+||||||.....++.+.+.++|++.+++|+.+++.+++.+.+.|++++. ++||++||..+..+.++..+|+++|+
T Consensus 497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKa 576 (681)
T PRK08324 497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKA 576 (681)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHH
Confidence 68999999999988788889999999999999999999999999999988764 89999999999988899999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccc--cChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYT--KTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v--~t~~~~~ 207 (218)
+++++++.++.|+.+.||++|.|+||.+ .|++..+
T Consensus 577 a~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~ 613 (681)
T PRK08324 577 AELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG 613 (681)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccc
Confidence 9999999999999999999999999999 8877543
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-30 Score=205.94 Aligned_cols=189 Identities=28% Similarity=0.353 Sum_probs=163.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++|++|||||+|+||++++++|+++|++|++++|+. +..+...+.+... ...+..+.+|+++.+++.++++++.+.+
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999864 3344444444332 2357788999999999999999999988
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+|||+||.....++.+.+.+++++.+++|+.+++++++++.|++.+.+ +.++.+++..+..+.++...|+.+|+
T Consensus 84 -~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~sK~ 161 (249)
T PRK09135 84 -GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQR-GAIVNITDIHAERPLKGYPVYCAAKA 161 (249)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCC-eEEEEEeChhhcCCCCCchhHHHHHH
Confidence 6899999999987666677788899999999999999999999999887653 78888888777778888899999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++.+++.++.++.+ ++++++|+||++.||+.+
T Consensus 162 ~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~ 194 (249)
T PRK09135 162 ALEMLTRSLALELAP-EVRVNAVAPGAILWPEDG 194 (249)
T ss_pred HHHHHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence 999999999999965 799999999999999854
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-30 Score=208.08 Aligned_cols=185 Identities=27% Similarity=0.357 Sum_probs=165.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+|+||++++++|+++|++|++++|+.++.+...+ . .+..+.+|+++.+++.++++.+.+..++.+|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----L--GFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----C--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 689999999999999999999999999999999877654321 1 2567889999999999999988775446899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
.++|++|.....+..+.+.+++++.+++|+.|++++.+.+++.+.+.+.++||++||.++..+.+....|+++|++++.+
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~ 156 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW 156 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence 99999998766677788999999999999999999999999999888778999999999988889999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++.++.++.+.++++++|+||+++|++.+..
T Consensus 157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~ 187 (256)
T PRK08017 157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNV 187 (256)
T ss_pred HHHHHHHHhhcCCEEEEEeCCCcccchhhcc
Confidence 9999999999999999999999999987654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-30 Score=205.89 Aligned_cols=176 Identities=27% Similarity=0.381 Sum_probs=154.5
Q ss_pred EEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEEE
Q 027816 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILV 100 (218)
Q Consensus 21 lItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vv 100 (218)
+||||++|||++++++|+++|++|++++|+.++.+...+.+. .+..++.+.+|+++.+++++++++. +++|++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li 74 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV 74 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence 699999999999999999999999999999887766665553 2456788899999999999988764 6899999
Q ss_pred ecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHHHHH
Q 027816 101 NNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180 (218)
Q Consensus 101 ~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~ 180 (218)
||+|.....++.+.+.++|++.+++|+.+++++++ .+.+. +.++||++||.++..+.++...|+++|+++++++++
T Consensus 75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (230)
T PRK07041 75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG 150 (230)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence 99998777777888999999999999999999999 33443 357999999999999989999999999999999999
Q ss_pred HHHHhccCCeEEEEeecccccChhhHHH
Q 027816 181 LACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 181 l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++.|+.. +|+++++||+++|++....
T Consensus 151 la~e~~~--irv~~i~pg~~~t~~~~~~ 176 (230)
T PRK07041 151 LALELAP--VRVNTVSPGLVDTPLWSKL 176 (230)
T ss_pred HHHHhhC--ceEEEEeecccccHHHHhh
Confidence 9999864 9999999999999997643
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.3e-31 Score=211.45 Aligned_cols=193 Identities=32% Similarity=0.344 Sum_probs=171.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+-.|+.++||||+.|||++.|++||++|.+|++++|++++++...+++.+. +.++..+.+|.++.+.+-+-+.+..+.
T Consensus 46 ~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~- 124 (312)
T KOG1014|consen 46 EKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG- 124 (312)
T ss_pred HhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-
Confidence 334689999999999999999999999999999999999999999998654 578999999999988733333333332
Q ss_pred CCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 93 NGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 93 ~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.++-++|||+|... +..+.+.+.+.+++.+.+|+++...+.+..+|.|.+.++|-||+++|.++..+.|..+.|+++
T Consensus 125 -~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysas 203 (312)
T KOG1014|consen 125 -LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSAS 203 (312)
T ss_pred -CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHH
Confidence 37899999999875 566778888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|..++.++++|..|+..+||.|-+|.|..|-|+|.+.-
T Consensus 204 K~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~ 241 (312)
T KOG1014|consen 204 KAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR 241 (312)
T ss_pred HHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence 99999999999999999999999999999999998643
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-31 Score=208.43 Aligned_cols=191 Identities=25% Similarity=0.228 Sum_probs=178.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++++|||+++|||+++|.++..+|+.|.++.|+.+++.+..++++-. ..+|.+..+|+.|.+++..+++++++.. ++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence 68999999999999999999999999999999999999988887633 3448899999999999999999999987 79
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
+|.+++|||...++.+.+.+.++++..+++|+.++++++++.++.|++.. .|+|+.+||.++..+..++++|+++|+|+
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al 192 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL 192 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence 99999999999999999999999999999999999999999999998765 57999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
.++++.+++|+...||+|..+.|+.++||.+++-.
T Consensus 193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En 227 (331)
T KOG1210|consen 193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN 227 (331)
T ss_pred HHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc
Confidence 99999999999999999999999999999877544
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-30 Score=204.26 Aligned_cols=188 Identities=32% Similarity=0.496 Sum_probs=166.8
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+||||++|+||.+++++|+++|++|++++|+. +..+...+.+...+..+....+|+++.++++++++++.+.+ +++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence 58999999999999999999999999998875 44444555555555568889999999999999999998888 68999
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHHH
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 178 (218)
|||++|.....++.+.+.+++++.+++|+.+.+.+++.+.+++.+.+.++++++||.++..+.++...|+++|.+++.++
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~ 159 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT 159 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence 99999987666667788899999999999999999999999987766789999999988888899999999999999999
Q ss_pred HHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 179 ~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+.++.++...|++++.++||+++|++.+..
T Consensus 160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~ 189 (239)
T TIGR01830 160 KSLAKELASRNITVNAVAPGFIDTDMTDKL 189 (239)
T ss_pred HHHHHHHhhcCeEEEEEEECCCCChhhhhc
Confidence 999999998999999999999999887543
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=207.39 Aligned_cols=186 Identities=27% Similarity=0.312 Sum_probs=154.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++||||+||||++++++|+++|++|++++|+.+ ..+.....+...+..+..+++|+++.++++++++++.+.+
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF 82 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999888754 3445555554445567889999999999999999998888
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-----CcCCCCchh
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-----SHVGSGSIY 167 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-----~~~~~~~~Y 167 (218)
+.+|++|||||..... +. ++.+.+++|+.+++++++.+.++|.+ .++||++||..+. .+.+.+.+|
T Consensus 83 -~~~d~vi~~ag~~~~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y 153 (248)
T PRK07806 83 -GGLDALVLNASGGMES---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPV 153 (248)
T ss_pred -CCCcEEEECCCCCCCC---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHH
Confidence 6899999999864221 11 24577899999999999999998854 3689999986543 233556799
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|++++.+++.++.|+++.||+||+|+||+++|++...+
T Consensus 154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~ 194 (248)
T PRK07806 154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATL 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhh
Confidence 99999999999999999999999999999999999876643
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=201.20 Aligned_cols=186 Identities=24% Similarity=0.275 Sum_probs=160.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+|+||.+++++|+++|++|++++|+++..+...+.+.+. ..++.+++|+++.++++++++++...+
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 79 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL- 79 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 357899999999999999999999999999999999988776665555432 357888999999999999999988877
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-cCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~~~~~~~Y~~sK~ 172 (218)
+.+|.+++++|.....+.. ..+++++.+++|+.+++.+++.++|.+++. +++|++||..+.. +.+....|+++|+
T Consensus 80 ~~id~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~iv~~ss~~~~~~~~~~~~~Y~~sK~ 155 (238)
T PRK05786 80 NAIDGLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEG--SSIVLVSSMSGIYKASPDQLSYAVAKA 155 (238)
T ss_pred CCCCEEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcC--CEEEEEecchhcccCCCCchHHHHHHH
Confidence 6899999999865443333 348899999999999999999999998653 6899999976643 5567788999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+++.+++.++.++...||++++|+||+++|++.
T Consensus 156 ~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~ 188 (238)
T PRK05786 156 GLAKAVEILASELLGRGIRVNGIAPTTISGDFE 188 (238)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence 999999999999998999999999999999874
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=194.38 Aligned_cols=197 Identities=29% Similarity=0.372 Sum_probs=174.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+.+|-+.+|||+.+|+|++.+.+|+++|+.|++.+-..++.+...+++ +.++.+...|+++.++++..++..+.+|
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf- 81 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF- 81 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc-
Confidence 457789999999999999999999999999999999888877777666 4568889999999999999999999999
Q ss_pred CcccEEEecCCCCCC------CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC------CCCeEEEEecCCccCcC
Q 027816 94 GKLNILVNNVGTNIR------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGGLSHV 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~------~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~------~~~~iv~~ss~~~~~~~ 161 (218)
|++|.+++|||.... ..-.-.+.|++++.+++|+.|++++++.-...|-++ .+|.||++.|.+++.+-
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq 161 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ 161 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence 799999999997532 112235789999999999999999999988888654 24789999999999999
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHhcccc
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMFSNLS 214 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~~~~~ 214 (218)
.+...|++||.++.+++.-++++++..|||+++|.||.++|||+...++...+
T Consensus 162 ~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~ 214 (260)
T KOG1199|consen 162 TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKS 214 (260)
T ss_pred cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999988766543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-29 Score=195.18 Aligned_cols=177 Identities=23% Similarity=0.294 Sum_probs=148.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+|+||++++++|+++|++|++++|+.+..++... . .+....+|+++.++++++++++.. +++|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~~~---~~~d 72 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----L--GAEALALDVADPASVAGLAWKLDG---EALD 72 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c--cceEEEecCCCHHHHHHHHHHhcC---CCCC
Confidence 589999999999999999999999999999999776554322 2 245789999999999998877632 4799
Q ss_pred EEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC---chhhhhHH
Q 027816 98 ILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG---SIYGATKA 172 (218)
Q Consensus 98 ~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~---~~Y~~sK~ 172 (218)
++||++|... ..+..+.+.++|++.+++|+.+++.++++++|+|.+. .+++++++|..+..+.... ..|+++|+
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~ 151 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKA 151 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHH
Confidence 9999999763 2345677899999999999999999999999988664 4789999998766553322 36999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++++++.++.++ .++++++|+||+++|+|.+
T Consensus 152 a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~ 183 (222)
T PRK06953 152 ALNDALRAASLQA--RHATCIALHPGWVRTDMGG 183 (222)
T ss_pred HHHHHHHHHhhhc--cCcEEEEECCCeeecCCCC
Confidence 9999999999986 5799999999999999865
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-29 Score=197.50 Aligned_cols=178 Identities=16% Similarity=0.169 Sum_probs=136.3
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+.+.+++|+++||||+||||++++++|+++|++|++++|+....... .. .. . ...+.+|+++.+++.+
T Consensus 8 ~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~-~~-~-~~~~~~D~~~~~~~~~------- 75 (245)
T PRK12367 8 AQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--ND-ES-P-NEWIKWECGKEESLDK------- 75 (245)
T ss_pred hHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hc-cC-C-CeEEEeeCCCHHHHHH-------
Confidence 44567899999999999999999999999999999999886322111 11 11 1 2567899999988653
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC---CCCeEEEEecCCccCcCCCCchh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS---GVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~---~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
.+ +++|++|||||... ..+.+.++|++.+++|+.+++++++.++|+|.++ +.+.+++.+|.++..+ +....|
T Consensus 76 ~~-~~iDilVnnAG~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y 150 (245)
T PRK12367 76 QL-ASLDVLILNHGINP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSY 150 (245)
T ss_pred hc-CCCCEEEECCccCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchh
Confidence 23 57999999999743 3456889999999999999999999999999763 2234545556555444 466789
Q ss_pred hhhHHHHHHHH---HHHHHHhccCCeEEEEeecccccChhh
Q 027816 168 GATKAAMNQLT---RNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 168 ~~sK~a~~~~~---~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
++||+++..+. +.++.|+...+++|+.++||+++|++.
T Consensus 151 ~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~ 191 (245)
T PRK12367 151 EISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN 191 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC
Confidence 99999986544 444445577899999999999999974
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=188.22 Aligned_cols=181 Identities=29% Similarity=0.401 Sum_probs=158.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.|+++||||+|+||++++++|+++ ++|++++|+.+..++..+.. ..+..+.+|++|.+++++++++. +++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~i 72 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRL 72 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCC
Confidence 579999999999999999999999 99999999987665544332 24677899999999998888764 479
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|+|||++|.....++.+.+.++|.+.+++|+.+.+.+.+.+++.++++. +++|++||..+..+.++...|+.+|.+++.
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~ 151 (227)
T PRK08219 73 DVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRANPGWGSYAASKFALRA 151 (227)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence 9999999987666777888999999999999999999999999887764 799999999888888889999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++.++.++... +++++|.||+++|++.....
T Consensus 152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~ 183 (227)
T PRK08219 152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLV 183 (227)
T ss_pred HHHHHHHHhcCC-ceEEEEecCCccchHhhhhh
Confidence 999999998766 99999999999999876543
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-27 Score=181.28 Aligned_cols=190 Identities=25% Similarity=0.294 Sum_probs=169.6
Q ss_pred CccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..++||++||+|-. ..|+..||+.+.++|+++.++..++ ++++.++++.+....-..++||+++.++++++|+++.+
T Consensus 2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~ 80 (259)
T COG0623 2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK 80 (259)
T ss_pred CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence 35789999999987 6999999999999999999999887 55555555544444456789999999999999999999
Q ss_pred hcCCcccEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCch
Q 027816 91 KFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~ 166 (218)
++ |.+|++||+-++.+ .+.+.|.+.|.|...+++..++...+++++.|.|.. .++|+.++-..+...+|++..
T Consensus 81 ~~-g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNv 157 (259)
T COG0623 81 KW-GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNV 157 (259)
T ss_pred hh-CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCch
Confidence 99 79999999999876 356778999999999999999999999999999976 479999999999899999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++.+|+++++-+|.|+.++++.|||||.|+-||++|--..
T Consensus 158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAas 197 (259)
T COG0623 158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAAS 197 (259)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhh
Confidence 9999999999999999999999999999999999996544
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=187.25 Aligned_cols=192 Identities=24% Similarity=0.210 Sum_probs=154.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEE--ecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHT--CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~--~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+|++|+||+|.|||..++..+.+++.+... ..|.....+... ...+........|++...-++++++..+++.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~---v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~- 80 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLK---VAYGDDFVHVVGDITEEQLLGALREAPRKKG- 80 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceE---EEecCCcceechHHHHHHHHHHHHhhhhhcC-
Confidence 5689999999999999999998888865433 444433322111 1112334445567777777788888777776
Q ss_pred CcccEEEecCCCCCC-CCC--CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhh
Q 027816 94 GKLNILVNNVGTNIR-KPT--IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 94 ~~id~vv~~ag~~~~-~~~--~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+..|++|||||...+ ... ...+.++|.++|+.|+++.+.+.+.++|.+++.+ .+.+|++||.++..+.++++.||.
T Consensus 81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~ 160 (253)
T KOG1204|consen 81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCS 160 (253)
T ss_pred CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhh
Confidence 689999999998654 222 3678899999999999999999999999998884 689999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHhcc
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMFSN 212 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~~~ 212 (218)
+|+|.++|.+.++.|-. ++|++.++.||.|||+|...+.++.
T Consensus 161 ~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~ 202 (253)
T KOG1204|consen 161 SKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETS 202 (253)
T ss_pred hHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhcc
Confidence 99999999999999965 7999999999999999998776543
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-26 Score=224.30 Aligned_cols=183 Identities=17% Similarity=0.186 Sum_probs=158.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCCh-------------------------------------------
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNE------------------------------------------- 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~------------------------------------------- 51 (218)
+|+++|||||++|||.++|++|+++ |++|++++|+.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5789999999999999999999998 69999999982
Q ss_pred ----hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhh
Q 027816 52 ----VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127 (218)
Q Consensus 52 ----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv 127 (218)
.+.....+.+...+..+.++.+|++|.++++++++++.+. +++|+||||||......+.+.+.++|++.|++|+
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence 0111222333344667889999999999999999999876 4799999999998878889999999999999999
Q ss_pred hhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 128 ~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.|.+++++++.+.+ .++||++||+++..+.++...|+++|.+++.+++.++.++. ++||++|+||+++|+|..
T Consensus 2154 ~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813 2154 DGLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred HHHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence 99999998875432 35799999999999999999999999999999999999973 599999999999999864
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=169.51 Aligned_cols=175 Identities=21% Similarity=0.272 Sum_probs=148.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHH---HHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKC---LKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
|+++||||+++||.+++++|+++|+ .|++++|+.+..+.. .+.+...+.++..+.+|+++.++++++++++.+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL- 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999997 688888876543322 23444445678889999999999999999998887
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|.++|++|.....++.+.+.+++++.+++|+.+++.+++.+ ...+.++++++||..+..+.++...|+++|.+
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~ 155 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELT----RDLPLDFFVLFSSVAGVLGNPGQANYAAANAF 155 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHh----ccCCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence 68999999999876666778899999999999999999999988 33445799999999988888999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeeccccc
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
++.+++.++. .|++++.++||+++
T Consensus 156 ~~~~~~~~~~----~~~~~~~~~~g~~~ 179 (180)
T smart00822 156 LDALAAHRRA----RGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHHh----cCCceEEEeecccc
Confidence 9999877654 48899999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-25 Score=187.88 Aligned_cols=174 Identities=24% Similarity=0.241 Sum_probs=136.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||+++||||+||||++++++|+++|++|++++|+.++.+.... .....+..+.+|++|.+++.+.+
T Consensus 174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~~~~v~~v~~Dvsd~~~v~~~l------- 243 (406)
T PRK07424 174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GEDLPVKTLHWQVGQEAALAELL------- 243 (406)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hcCCCeEEEEeeCCCHHHHHHHh-------
Confidence 46789999999999999999999999999999999998766543222 22234667889999998865533
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC----CeEEEEecCCccCcCCCCchhh
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV----GSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~----~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+++|++|||||... ..+.+.+++++.+++|+.|+++++++++|.|++++. +.+|++|+ ++ ...+..+.|+
T Consensus 244 -~~IDiLInnAGi~~---~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ 317 (406)
T PRK07424 244 -EKVDILIINHGINV---HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYE 317 (406)
T ss_pred -CCCCEEEECCCcCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHH
Confidence 46899999999743 236788999999999999999999999999987642 23455554 33 3334567899
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+||+|+.++++ ++++. .++.+..+.||+++|+|.
T Consensus 318 ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~ 351 (406)
T PRK07424 318 LSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLN 351 (406)
T ss_pred HHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCC
Confidence 99999999985 45542 467788889999999874
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=170.65 Aligned_cols=191 Identities=20% Similarity=0.203 Sum_probs=164.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-----eEEEecCChhhHHHHHHHhhh----CCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-----VVHTCSRNEVELNKCLKEWQS----KGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-----~V~~~~r~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
.|+++|||++||||.+||++|++... ++++++|+-++.+.....+.+ +...+.++++|+++..++.++..+
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 48999999999999999999998764 578889999988877666654 356899999999999999999999
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCC---------------------------CCHHHHHHHHHhhhhhHHHHHHHHhHH
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIE---------------------------YSAEEYSKIMTTNFESTYHLCQLVYPL 140 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~---------------------------~~~~~~~~~~~~nv~~~~~~~~~~~~~ 140 (218)
+.++| .++|.++.|||..+...+.+ .+.|++.+.|++||+|++++.+.+.|.
T Consensus 83 i~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 83 IKQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 99999 79999999999754322221 255788899999999999999999999
Q ss_pred hHhCCCCeEEEEecCCcc---------CcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 141 LKASGVGSIVFISSVGGL---------SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 141 l~~~~~~~iv~~ss~~~~---------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+...+...+|++||..+. ....+..+|..||.+.+-+.-++-+.+.+.|+...+|+||..-|.+....
T Consensus 162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~ 238 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEY 238 (341)
T ss_pred hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhh
Confidence 998877799999997543 34678899999999999999999999999999999999999999887644
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=178.26 Aligned_cols=150 Identities=25% Similarity=0.259 Sum_probs=128.0
Q ss_pred HHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCC
Q 027816 33 TVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI 112 (218)
Q Consensus 33 la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~ 112 (218)
+|++|+++|++|++++|+.+..+. ...+++|+++.++++++++++. +++|+||||||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~---- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGT---- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCC----
Confidence 478999999999999998765321 2346899999999999988773 579999999996421
Q ss_pred CCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC---------------------------cCCCCc
Q 027816 113 EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------------------------HVGSGS 165 (218)
Q Consensus 113 ~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~---------------------------~~~~~~ 165 (218)
+++++.+++|+.+++.+++.++|+|.+ .++||++||.+++. +.++..
T Consensus 62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
T PRK12428 62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT 135 (241)
T ss_pred ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence 247899999999999999999999864 37999999987763 456778
Q ss_pred hhhhhHHHHHHHHHHHH-HHhccCCeEEEEeecccccChhhHH
Q 027816 166 IYGATKAAMNQLTRNLA-CEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~-~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|++||++++++++.++ .|+++.|||||+|+||+++|+|.++
T Consensus 136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~ 178 (241)
T PRK12428 136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD 178 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCccccc
Confidence 99999999999999999 9999999999999999999999764
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-24 Score=163.58 Aligned_cols=174 Identities=21% Similarity=0.337 Sum_probs=140.0
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh---hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++||||+.||||..++++|+++|. +|++++|+. .......+++...+..+.+.++|++|.++++++++++.+.+ +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence 689999999999999999999986 899999983 23456777888888899999999999999999999999988 7
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
+++.|||+||.....++.+.+.+++++.++..+.+..++.+.+. ..+...+|.+||+++..+.++...|+++...+
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~----~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~l 156 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALE----NRPLDFFILFSSISSLLGGPGQSAYAAANAFL 156 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHT----TTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhh----cCCCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence 99999999999888889999999999999999999999999874 35567899999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeeccccc
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
+.+++..+.. |.++.+|+.|..+
T Consensus 157 da~a~~~~~~----g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 157 DALARQRRSR----GLPAVSINWGAWD 179 (181)
T ss_dssp HHHHHHHHHT----TSEEEEEEE-EBS
T ss_pred HHHHHHHHhC----CCCEEEEEccccC
Confidence 9999876654 7789999887654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-23 Score=172.46 Aligned_cols=168 Identities=19% Similarity=0.215 Sum_probs=133.4
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++||++|||||+|+||++++++|+++| ++|++.+|+........+.+. ...+..+.+|++|.+++.++++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------ 73 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------ 73 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence 468999999999999999999999987 689999987665443333332 2357888999999999877664
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
.+|+|||+||.... +..+.+ ..+.+++|+.+++++++++.+ .+.++||++||.....+ ..+|+++|.
T Consensus 74 --~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK~ 140 (324)
T TIGR03589 74 --GVDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATKL 140 (324)
T ss_pred --cCCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHHH
Confidence 37999999996432 222222 356899999999999999853 45579999999754433 478999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+.+.+++.++.++...|+++++++||.+..|
T Consensus 141 ~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~ 171 (324)
T TIGR03589 141 ASDKLFVAANNISGSKGTRFSVVRYGNVVGS 171 (324)
T ss_pred HHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence 9999999998888888999999999999864
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=168.39 Aligned_cols=175 Identities=19% Similarity=0.133 Sum_probs=136.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+||++|||||+|+||++++++|+++|++|++++|+..........+. ....+..+.+|+++.+++.+++++. .
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~------~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF------K 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc------C
Confidence 57899999999999999999999999999999987765433322221 1234667889999999998888853 5
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC------------cCCC
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------HVGS 163 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------~~~~ 163 (218)
+|+|||+|+.. ..+.+.+++.+.+++|+.+++++++++.. ....+++|++||...+. +..+
T Consensus 76 ~d~vih~A~~~----~~~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p 148 (349)
T TIGR02622 76 PEIVFHLAAQP----LVRKSYADPLETFETNVMGTVNLLEAIRA---IGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGG 148 (349)
T ss_pred CCEEEECCccc----ccccchhCHHHHHHHhHHHHHHHHHHHHh---cCCCCEEEEEechhhhCCCCCCCCCccCCCCCC
Confidence 89999999953 22345567788999999999999998742 12246899999864321 1234
Q ss_pred CchhhhhHHHHHHHHHHHHHHhcc----CCeEEEEeecccccChh
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~----~gv~v~~v~PG~v~t~~ 204 (218)
..+|+.+|.+.+.+++.++.++.+ .|++++++.|+.+..|.
T Consensus 149 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 149 HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 578999999999999999998754 48999999999888763
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.1e-22 Score=172.25 Aligned_cols=173 Identities=17% Similarity=0.187 Sum_probs=136.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-----C----CCeEEEEEeeCCCHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-----K----GFVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~----~~~v~~~~~D~~~~~~~~~~ 84 (218)
..+||+++||||+|+||++++++|+++|++|++++|+.++.+...+++.. . ...+..+.+|+++.+++.+.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 45789999999999999999999999999999999999887766554422 1 13578899999999887653
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCC
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGS 163 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~ 163 (218)
+ +.+|+||||+|.... ...++...+++|+.+..++++++. +.+.++||++||.++. .+.+.
T Consensus 157 L--------ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g~p~ 218 (576)
T PLN03209 157 L--------GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVGFPA 218 (576)
T ss_pred h--------cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccCccc
Confidence 3 468999999986421 122467788999999999999874 4456799999998764 22222
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
..|. +|+++..+.+.+..++...||+++.|+||++.|++.+
T Consensus 219 -~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~ 259 (576)
T PLN03209 219 -AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDA 259 (576)
T ss_pred -cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccc
Confidence 2244 7888888889999999889999999999999988654
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.9e-21 Score=157.15 Aligned_cols=188 Identities=16% Similarity=0.093 Sum_probs=140.9
Q ss_pred cCCcEEEEecCCCchHHH--HHHHHHhCCCeEEEecCChhhH------------HHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 15 LKGMTALVTGGTRGIGQA--TVEELAGLGAVVHTCSRNEVEL------------NKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~--la~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
..+|++||||+++|||.+ +|+.| ++|++|+++++..+.. +...+.+...+..+..+.+|+++.++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 457999999999999999 89999 9999988887532211 12233333445567788999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCCC-----------------CC-----------------CCCHHHHHHHHHhh
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKP-----------------TI-----------------EYSAEEYSKIMTTN 126 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~~-----------------~~-----------------~~~~~~~~~~~~~n 126 (218)
++++++++.+++ |++|+||||+|.+.... +. ..+.++++. +++
T Consensus 118 v~~lie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~--Tv~ 194 (398)
T PRK13656 118 KQKVIELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIAD--TVK 194 (398)
T ss_pred HHHHHHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHH--HHH
Confidence 999999999999 79999999999873211 11 122233332 334
Q ss_pred hhhH---HHHH--HHHhHHhHhCCCCeEEEEecCCccCcCCCC--chhhhhHHHHHHHHHHHHHHhccCCeEEEEeeccc
Q 027816 127 FEST---YHLC--QLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY 199 (218)
Q Consensus 127 v~~~---~~~~--~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~--~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~ 199 (218)
++|. ...+ +...+.|. ..+++|..|.+.+....|.+ +..+.+|++++..++.|+.++++.|+|+|++.+|+
T Consensus 195 vMggedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~ 272 (398)
T PRK13656 195 VMGGEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKA 272 (398)
T ss_pred hhccchHHHHHHHHHhccccc--CCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCc
Confidence 4444 2222 33334443 34799999999888877777 59999999999999999999999999999999999
Q ss_pred ccChhhHHH
Q 027816 200 TKTSLVERV 208 (218)
Q Consensus 200 v~t~~~~~~ 208 (218)
+.|.-...+
T Consensus 273 ~~T~Ass~I 281 (398)
T PRK13656 273 VVTQASSAI 281 (398)
T ss_pred ccchhhhcC
Confidence 999876654
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=160.44 Aligned_cols=172 Identities=13% Similarity=0.106 Sum_probs=133.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh--hCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ--SKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++|++|||||+|+||++++++|+++|++|++++|+.+.......... .....+..+.+|+++.++++++++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------- 76 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID------- 76 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence 47899999999999999999999999999988888765443322221 112457888999999998887765
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-----------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----------- 162 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~----------- 162 (218)
.+|+|||+||... .+.+.+++.+.+++|+.+++++++++.+.+ +.++||++||.++..+..
T Consensus 77 -~~d~vih~A~~~~----~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E 148 (325)
T PLN02989 77 -GCETVFHTASPVA----ITVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDE 148 (325)
T ss_pred -CCCEEEEeCCCCC----CCCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCc
Confidence 3699999999642 133445678899999999999999986643 246899999976543211
Q ss_pred -----------CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 163 -----------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 163 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
....|+.+|.+.+.+++.+.++ .|++++.++|+.+..|..
T Consensus 149 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~ 199 (325)
T PLN02989 149 TFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPIL 199 (325)
T ss_pred CCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCC
Confidence 0246999999999999988877 489999999999988754
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=158.39 Aligned_cols=172 Identities=15% Similarity=0.126 Sum_probs=141.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH--HHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK--CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|+||||+|.||++|+++|+++||.|..+.|+++..+. ...+++........+..|+++++++.+.++.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g------ 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG------ 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhC------
Confidence 57899999999999999999999999999999999987544 5677776677789999999999999888884
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcC-CCC-------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHV-GSG------- 164 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~-~~~------- 164 (218)
.|+|+|.|....... .+.-.+.++..+.|+.++++++. +.+ ..|||++||.++.... +..
T Consensus 79 --cdgVfH~Asp~~~~~-----~~~e~~li~pav~Gt~nVL~ac~----~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvd 147 (327)
T KOG1502|consen 79 --CDGVFHTASPVDFDL-----EDPEKELIDPAVKGTKNVLEACK----KTKSVKRVVYTSSTAAVRYNGPNIGENSVVD 147 (327)
T ss_pred --CCEEEEeCccCCCCC-----CCcHHhhhhHHHHHHHHHHHHHh----ccCCcceEEEeccHHHhccCCcCCCCCcccc
Confidence 599999998643321 11233688999999999999994 333 5699999998887643 111
Q ss_pred --------------chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 165 --------------SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 165 --------------~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.-|+.||.-.+..+..++.| .|+...+|+||.|--|...+
T Consensus 148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCccc
Confidence 24899999999988888888 58999999999999988876
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-20 Score=159.42 Aligned_cols=180 Identities=16% Similarity=0.082 Sum_probs=132.1
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh---h----H---------HHHHHHhh-hCCCeEEEEEe
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV---E----L---------NKCLKEWQ-SKGFVVSGSVC 73 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~---~----~---------~~~~~~~~-~~~~~v~~~~~ 73 (218)
....+++|+||||||+|+||++++++|+++|++|++++|... . . ....+.+. .....+.++.+
T Consensus 41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~ 120 (442)
T PLN02572 41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG 120 (442)
T ss_pred CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence 445678899999999999999999999999999998764211 0 0 00111111 11235788899
Q ss_pred eCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEE
Q 027816 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFI 152 (218)
Q Consensus 74 D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ 152 (218)
|++|.+.+.++++.. ++|+|||+|+... .+..+.++++++..+++|+.|++++++++.. .+. .++|++
T Consensus 121 Dl~d~~~v~~~l~~~------~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----~gv~~~~V~~ 189 (442)
T PLN02572 121 DICDFEFLSEAFKSF------EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKE----FAPDCHLVKL 189 (442)
T ss_pred CCCCHHHHHHHHHhC------CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHH----hCCCccEEEE
Confidence 999999988888753 5899999987532 2333455667788899999999999998843 333 479999
Q ss_pred ecCCccC------------------------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 153 SSVGGLS------------------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 153 ss~~~~~------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
||...+. +..+..+|+.+|.+.+.+++.+++. +|+++..+.|+.+-.|.
T Consensus 190 SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~ 262 (442)
T PLN02572 190 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVR 262 (442)
T ss_pred ecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCC
Confidence 9864331 1122368999999999999888776 58999999998886664
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-20 Score=139.79 Aligned_cols=142 Identities=19% Similarity=0.182 Sum_probs=115.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+.+++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+..+..+++|+++.++++++++++.+.+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999887776666665545567788999999999999999999988
Q ss_pred CCcccEEEecCCCCCCC-CCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-------CCeEEEEecCCcc
Q 027816 93 NGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-------VGSIVFISSVGGL 158 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~-~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-------~~~iv~~ss~~~~ 158 (218)
|++|++|||||..... ++++.+.++ ++ .+|+.+.+.+++.+.++|.+++ .|++..+|+.+..
T Consensus 92 -G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 92 -SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred -CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 6899999999987643 444445444 33 6778888889999888877653 4788888876543
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.3e-20 Score=152.14 Aligned_cols=173 Identities=13% Similarity=0.075 Sum_probs=127.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh--hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+-.+|+++||||+|+||++++++|+++|++|+++.|+.+ ........+......+..+.+|++|.+++.+.+.
T Consensus 3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~----- 77 (297)
T PLN02583 3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK----- 77 (297)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-----
Confidence 335789999999999999999999999999999988643 2222333332223457788999999988765554
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-C--------
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-G-------- 162 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-~-------- 162 (218)
..|.++|.++.. .+.. +++++.+++|+.+++++++++.+.+ ..++||++||.++.... +
T Consensus 78 ---~~d~v~~~~~~~-----~~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~ 145 (297)
T PLN02583 78 ---GCSGLFCCFDPP-----SDYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDV 145 (297)
T ss_pred ---CCCEEEEeCccC-----Cccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCC
Confidence 358888876532 1111 2467899999999999999986543 34699999997654211 0
Q ss_pred -----C--------CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 163 -----S--------GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 163 -----~--------~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
. ...|+.||...+.+++.++++ .|+++++|+|+.|..|...
T Consensus 146 ~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~ 199 (297)
T PLN02583 146 DERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLT 199 (297)
T ss_pred CcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCC
Confidence 0 016999999999999888766 4899999999999888643
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-19 Score=152.61 Aligned_cols=176 Identities=22% Similarity=0.198 Sum_probs=130.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+.++++||||||+|+||++++++|+++|++|++++|+.+........+.. ...+..+.+|+++.+.+.++++
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~------- 78 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK------- 78 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------
Confidence 34678999999999999999999999999999999887655544443322 3467888999999998777654
Q ss_pred CcccEEEecCCCCCCCC-CCCCCHHHH--HHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC---------
Q 027816 94 GKLNILVNNVGTNIRKP-TIEYSAEEY--SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--------- 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~-~~~~~~~~~--~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--------- 161 (218)
.+|+|||+|+...... ....+++.+ ...++.|+.++.++++++.+. ...++||++||.+.+...
T Consensus 79 -~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~ 154 (353)
T PLN02896 79 -GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS---KTVKRVVFTSSISTLTAKDSNGRWRAV 154 (353)
T ss_pred -CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc---CCccEEEEEechhhccccccCCCCCCc
Confidence 3699999999754321 122233333 346677889999999988543 124689999996544210
Q ss_pred ----------------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 ----------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 ----------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+...+|+.||.+.+.+++.++++ .|+++++++|+.+-.|.
T Consensus 155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~ 210 (353)
T PLN02896 155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPF 210 (353)
T ss_pred cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Confidence 11237999999999999988877 48999999997776664
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.3e-20 Score=152.45 Aligned_cols=171 Identities=14% Similarity=0.120 Sum_probs=128.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh--hCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ--SKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+||+++||||+|+||++++++|+++|++|+++.|+.+..+....... .....+..+.+|+++.+++.++++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 76 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------- 76 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------
Confidence 57899999999999999999999999999988887765433322211 112457888999999998877776
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-cC-----------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HV----------- 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~~----------- 161 (218)
.+|+|||+|+..... . .+...+.+++|+.++.++++++... .+..+||++||.+... +.
T Consensus 77 -~~d~vih~A~~~~~~---~--~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E 147 (322)
T PLN02986 77 -GCDAVFHTASPVFFT---V--KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVDE 147 (322)
T ss_pred -CCCEEEEeCCCcCCC---C--CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcCc
Confidence 369999999863211 1 1223567899999999999987421 2346899999976431 11
Q ss_pred -----C-----CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 162 -----G-----SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 162 -----~-----~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+ ....|+.+|.+.+.+++.+.++ +|+++++++|+.+..|..
T Consensus 148 ~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~ 198 (322)
T PLN02986 148 TFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLL 198 (322)
T ss_pred ccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCC
Confidence 0 1356999999999999988776 489999999999988764
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-20 Score=154.80 Aligned_cols=178 Identities=19% Similarity=0.093 Sum_probs=128.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH-HHHHHhh----hCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQ----SKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+.++|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+. .....+..+.+|++|.+++.++++..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 456899999999999999999999999999999988654211 1111111 11245788899999999998888864
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCC--ccC------
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVG--GLS------ 159 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~--~~~------ 159 (218)
.+|+|||+|+.... +...+++...+++|+.++.++++++.++..+++ ..++|++||.. +..
T Consensus 83 ------~~d~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E 152 (340)
T PLN02653 83 ------KPDEVYNLAAQSHV----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSE 152 (340)
T ss_pred ------CCCEEEECCcccch----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCC
Confidence 48999999996432 223345677789999999999999977654321 12688887742 221
Q ss_pred --cCCCCchhhhhHHHHHHHHHHHHHHhcc---CCeEEEEeeccccc
Q 027816 160 --HVGSGSIYGATKAAMNQLTRNLACEWAK---DNIRTNSVAPWYTK 201 (218)
Q Consensus 160 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~---~gv~v~~v~PG~v~ 201 (218)
+..+..+|+.||.+.+.+++.++.++.- .++.++.+.|+...
T Consensus 153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~ 199 (340)
T PLN02653 153 TTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGE 199 (340)
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc
Confidence 1123578999999999999999988642 23455666676543
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-19 Score=151.34 Aligned_cols=170 Identities=18% Similarity=0.112 Sum_probs=127.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH--HHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL--KEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++|++|||||+|+||++++++|+++|++|+++.|+.+...... ..+.. ...+..+.+|++|.+++.++++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~------ 79 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA------ 79 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh------
Confidence 45789999999999999999999999999988888764432221 11211 1257788999999988777664
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc------------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------ 160 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~------------ 160 (218)
.+|+|||+|+... .. ..+.+.+.+++|+.++.++++++.+. .+.++||++||.+.+..
T Consensus 80 --~~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E 149 (338)
T PLN00198 80 --GCDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE 149 (338)
T ss_pred --cCCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence 4699999998521 11 12234567899999999999998532 23469999999754431
Q ss_pred ------------CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 161 ------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 161 ------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.++..+|+.||.+.+.+++.++.+ +|++++.++|+.+-.|.
T Consensus 150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPS 202 (338)
T ss_pred ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCC
Confidence 123567999999999999998877 58999999999887764
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.9e-20 Score=152.14 Aligned_cols=166 Identities=16% Similarity=0.116 Sum_probs=128.0
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH-HHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK-CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++|+++||||+|+||++++++|+++|++|++++|+.+.... ....+......+..+.+|+++.+++.++++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 80 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID------- 80 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence 457899999999999999999999999999999997654322 122232222357788899999998877765
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC----C-------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV----G------- 162 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~----~------- 162 (218)
.+|+|||+|+... +++.+.+++|+.++.++++++. +.+..+||++||.++..+. +
T Consensus 81 -~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~ 146 (342)
T PLN02214 81 -GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVYMDPNRDPEAVVDES 146 (342)
T ss_pred -cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeeeccCCCCCCcccCcc
Confidence 3699999998531 2356789999999999999884 3445689999996543211 0
Q ss_pred ----------CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 163 ----------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 163 ----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
....|+.+|.+.+.+++.++++ .|++++.++|+.+--|.
T Consensus 147 ~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~ 195 (342)
T PLN02214 147 CWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPP 195 (342)
T ss_pred cCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCC
Confidence 2247999999999999988877 48999999999887764
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=151.79 Aligned_cols=171 Identities=17% Similarity=0.145 Sum_probs=128.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh--hCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ--SKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+.|+||||||+|+||++++++|+++|++|++++|+.+.......... .....+.++..|+++.+.+.++++
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------- 76 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------- 76 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence 46799999999999999999999999999998887655443322221 112357788999999988877665
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC----C-------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV----G------- 162 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~----~------- 162 (218)
.+|+|||+|+... ... .+.+.+.+++|+.++.++++++.+. ....+||++||.....+. +
T Consensus 77 -~~d~ViH~A~~~~---~~~--~~~~~~~~~~Nv~gt~~ll~aa~~~---~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~ 147 (351)
T PLN02650 77 -GCTGVFHVATPMD---FES--KDPENEVIKPTVNGMLSIMKACAKA---KTVRRIVFTSSAGTVNVEEHQKPVYDEDCW 147 (351)
T ss_pred -CCCEEEEeCCCCC---CCC--CCchhhhhhHHHHHHHHHHHHHHhc---CCceEEEEecchhhcccCCCCCCccCcccC
Confidence 3699999998532 111 1234577899999999999998543 113589999987432210 0
Q ss_pred -----------CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 163 -----------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 163 -----------~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
...+|+.||.+.+.+++.++++ +|++++.++|+.+..|..
T Consensus 148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~ 198 (351)
T PLN02650 148 SDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFI 198 (351)
T ss_pred CchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCC
Confidence 1237999999999999999887 589999999999988753
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-19 Score=148.60 Aligned_cols=172 Identities=17% Similarity=0.128 Sum_probs=123.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHH-HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELN-KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
|++|||||+|+||++++++|+++|++ |++.+|...... .....+ .....+..+.+|++|.++++++++.. .
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~------~ 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPV-AQSERFAFEKVDICDRAELARVFTEH------Q 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhc-ccCCceEEEECCCcChHHHHHHHhhc------C
Confidence 58999999999999999999999986 445555432111 011111 12235677889999999988887742 5
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhH---h--CCCCeEEEEecCCccC-----------
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK---A--SGVGSIVFISSVGGLS----------- 159 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~---~--~~~~~iv~~ss~~~~~----------- 159 (218)
+|+|||+||... .+.+.+++.+.+++|+.++.++++++.+.+. + .+..++|++||.+.+.
T Consensus 75 ~D~Vih~A~~~~----~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E 150 (355)
T PRK10217 75 PDCVMHLAAESH----VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE 150 (355)
T ss_pred CCEEEECCcccC----cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence 899999998642 2334566788999999999999999976532 1 1235899998853221
Q ss_pred --cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 160 --HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 160 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+..+..+|+.||.+.+.+++.+++++ ++++..+.|+.+-.|
T Consensus 151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp 193 (355)
T PRK10217 151 TTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGP 193 (355)
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCC
Confidence 22346789999999999999998874 677888887665443
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.5e-19 Score=146.68 Aligned_cols=171 Identities=14% Similarity=0.116 Sum_probs=125.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh--hhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW--QSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++|++|||||+|+||++++++|+++|++|++++|+.+......... ......+..+.+|+++.+.+.++++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 75 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD------- 75 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence 4689999999999999999999999999999888765433221111 1112467888999999988777665
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCc--cCcC----------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG--LSHV---------- 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~--~~~~---------- 161 (218)
.+|+|||+|+..... .. +...+.+++|+.++.++++++... .+..+||++||.++ +.+.
T Consensus 76 -~~d~Vih~A~~~~~~---~~--~~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E 146 (322)
T PLN02662 76 -GCEGVFHTASPFYHD---VT--DPQAELIDPAVKGTLNVLRSCAKV---PSVKRVVVTSSMAAVAYNGKPLTPDVVVDE 146 (322)
T ss_pred -CCCEEEEeCCcccCC---CC--ChHHHHHHHHHHHHHHHHHHHHhC---CCCCEEEEccCHHHhcCCCcCCCCCCcCCc
Confidence 369999999864211 11 122477899999999999988432 13468999999653 1110
Q ss_pred -----C-----CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 162 -----G-----SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 162 -----~-----~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+ ....|+.+|.+.+.+++.+.++ .+++++.++|+.+..|..
T Consensus 147 ~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~ 197 (322)
T PLN02662 147 TWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLL 197 (322)
T ss_pred ccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCC
Confidence 1 0147999999999999888776 589999999999988753
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-18 Score=145.10 Aligned_cols=168 Identities=22% Similarity=0.238 Sum_probs=123.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH---HHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC---LKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
++++|+++||||+|+||++++++|+++|++|++++|........ ..... .....+..+.+|+++.+++.+++++.
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~- 80 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST- 80 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence 57789999999999999999999999999999988754322111 11111 12235778899999999988887642
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC----------
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------- 159 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~---------- 159 (218)
.+|+|||+|+..... .+.+++.+.+++|+.++.++++++ .+.+..++|++||...+.
T Consensus 81 -----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E~ 147 (352)
T PLN02240 81 -----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTEE 147 (352)
T ss_pred -----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCC
Confidence 689999999964321 233457788999999999999876 444456899999863221
Q ss_pred -cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeec
Q 027816 160 -HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197 (218)
Q Consensus 160 -~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~P 197 (218)
+..+..+|+.+|.+.+.+++.++.+ ..++++..+.|
T Consensus 148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~ 184 (352)
T PLN02240 148 FPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRY 184 (352)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEee
Confidence 1224578999999999999988765 23566766664
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-18 Score=148.05 Aligned_cols=170 Identities=22% Similarity=0.235 Sum_probs=141.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
-++||+||||||+|.||+++++++++.+. ++++.+|++.+.-....++... ..++...-+|+.|.+.++++++..
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-- 324 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-- 324 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence 46899999999999999999999999985 7999999999988888887664 467888999999999998888843
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++|+|+|.|+.-.. | .-..++.+.+.+|++|+.++++++ .+.+..++|.+|+--+..|. ..|+++
T Consensus 325 ----kvd~VfHAAA~KHV-P---l~E~nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~Pt---NvmGaT 389 (588)
T COG1086 325 ----KVDIVFHAAALKHV-P---LVEYNPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNPT---NVMGAT 389 (588)
T ss_pred ----CCceEEEhhhhccC-c---chhcCHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCCc---hHhhHH
Confidence 79999999997322 2 223456788999999999999998 45566789999987776664 899999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccc
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v 200 (218)
|...+.+++++.......+-++.+|.=|=|
T Consensus 390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNV 419 (588)
T COG1086 390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNV 419 (588)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEecce
Confidence 999999999999977655677777765533
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.4e-19 Score=146.26 Aligned_cols=170 Identities=20% Similarity=0.066 Sum_probs=119.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-----HHHHHHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
|++|||||+|+||++++++|+++|++|++++|+.+. .....+... .....+..+.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 689999999999999999999999999999987542 111111110 01235788899999999988888854
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------c
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------H 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~ 160 (218)
++|+|||+|+..... .+.+.....+++|+.++.++++++.+.-. .+..++|++||...+. +
T Consensus 78 ---~~d~ViH~Aa~~~~~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~~~ 149 (343)
T TIGR01472 78 ---KPTEIYNLAAQSHVK----VSFEIPEYTADVDGIGTLRLLEAVRTLGL-IKSVKFYQASTSELYGKVQEIPQNETTP 149 (343)
T ss_pred ---CCCEEEECCcccccc----hhhhChHHHHHHHHHHHHHHHHHHHHhCC-CcCeeEEEeccHHhhCCCCCCCCCCCCC
Confidence 479999999964321 22233456788999999999999854210 1113789998853221 1
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccC---CeEEEEeecc
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKD---NIRTNSVAPW 198 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~---gv~v~~v~PG 198 (218)
..+..+|+.||.+.+.+++.+++++.-. ++.++...|+
T Consensus 150 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~ 190 (343)
T TIGR01472 150 FYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPR 190 (343)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCC
Confidence 2345789999999999999998885322 2333455565
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-18 Score=144.12 Aligned_cols=174 Identities=14% Similarity=0.062 Sum_probs=128.0
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh----h-CCCeEEEEEeeCCCHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ----S-KGFVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~-~~~~v~~~~~D~~~~~~~~~~~ 85 (218)
..+.+++|+||||||+|.||++++++|+++|++|++++|............. . ....+..+.+|+++.+.+.+++
T Consensus 9 ~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~ 88 (348)
T PRK15181 9 TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC 88 (348)
T ss_pred hcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 3456778999999999999999999999999999999886543222111111 1 1134778889999988876666
Q ss_pred HHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----
Q 027816 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----- 160 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----- 160 (218)
+ .+|+|||.|+.... ..+.++..+.+++|+.|+.++++++ ++.+..++|++||...+..
T Consensus 89 ~--------~~d~ViHlAa~~~~----~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~~~~~ 152 (348)
T PRK15181 89 K--------NVDYVLHQAALGSV----PRSLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDHPDLP 152 (348)
T ss_pred h--------CCCEEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCCCCCC
Confidence 4 36999999996422 1123345567999999999999988 4445568999998643321
Q ss_pred ------CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 161 ------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 161 ------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..+..+|+.+|.+.+.+++.++.+ .|+++..+.|+-+-.|
T Consensus 153 ~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp 198 (348)
T PRK15181 153 KIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGR 198 (348)
T ss_pred CCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCc
Confidence 123468999999999999888766 4899999999877555
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=136.98 Aligned_cols=156 Identities=21% Similarity=0.200 Sum_probs=123.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|.||++.+++|++.|++|++.++....-.+.+.... +.+++.|+.|.+-+.++|++- +||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~------~id 69 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEEN------KID 69 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhc------CCC
Confidence 479999999999999999999999999999876554443333221 567899999999998888864 799
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cCCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~~~~~~ 166 (218)
.|+|.||... ...|.++..++++.|+.|++.+++++ ++.+..+|||-||.+-+. +..+..|
T Consensus 70 aViHFAa~~~----VgESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NP 141 (329)
T COG1087 70 AVVHFAASIS----VGESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINP 141 (329)
T ss_pred EEEECccccc----cchhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence 9999999743 34578889999999999999999987 666667788877754322 2335579
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEe
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSV 195 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v 195 (218)
|+.||..+|.+.+.+++.. +.++..+
T Consensus 142 YG~sKlm~E~iL~d~~~a~---~~~~v~L 167 (329)
T COG1087 142 YGRSKLMSEEILRDAAKAN---PFKVVIL 167 (329)
T ss_pred chhHHHHHHHHHHHHHHhC---CCcEEEE
Confidence 9999999999999999884 4555444
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.7e-18 Score=142.40 Aligned_cols=172 Identities=13% Similarity=0.083 Sum_probs=126.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh------CCCeEEEEEeeCCCHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS------KGFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
..+++|+||||||+|+||++++++|+++|++|+++.|+.+..+.. +.+.. ....+..+.+|++|.+++.++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 356789999999999999999999999999999888876654443 22211 01247788999999999888776
Q ss_pred HHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCc-cC-----
Q 027816 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGG-LS----- 159 (218)
Q Consensus 87 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~-~~----- 159 (218)
. +|.++|.|+......... ......++|+.++.++++++. +. +..++|++||..+ ..
T Consensus 128 ~--------~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~~----~~~~v~r~V~~SS~~~~vyg~~~~ 191 (367)
T PLN02686 128 G--------CAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEACV----RTESVRKCVFTSSLLACVWRQNYP 191 (367)
T ss_pred h--------ccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHHH----hcCCccEEEEeccHHHhcccccCC
Confidence 3 488999888643222111 112345678999999999873 32 3568999999531 11
Q ss_pred ---c--------------CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 160 ---H--------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 160 ---~--------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+ ..+..+|+.+|.+.+.+++.++++ +|+++++++|+.+..|.
T Consensus 192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPG 250 (367)
T ss_pred CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCC
Confidence 0 012246999999999999988777 58999999999998885
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=137.16 Aligned_cols=168 Identities=19% Similarity=0.098 Sum_probs=122.4
Q ss_pred EEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhh-HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+|+||||+|+||++++++|+++| ++|++.+|.... .....+.+.. ...+..+.+|+++.+++.++++.. +
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~------~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH------Q 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc------C
Confidence 48999999999999999999987 688888764321 1111122211 234677889999999988887642 5
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc------------CCC
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------VGS 163 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~------------~~~ 163 (218)
+|+|||+|+.... +.+.+++++.+++|+.++.++++++...+ ...++|++||...+.. ...
T Consensus 74 ~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~ 146 (317)
T TIGR01181 74 PDAVVHFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDEVYGDLEKGDAFTETTPLAP 146 (317)
T ss_pred CCEEEEcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence 8999999986421 23445667889999999999999874432 2247999998542221 123
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
...|+.+|.+.+.+++.++.+ .++++..+.|+.+-.|
T Consensus 147 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~ 183 (317)
T TIGR01181 147 SSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGP 183 (317)
T ss_pred CCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCC
Confidence 457999999999999998877 4799999999877654
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-17 Score=138.01 Aligned_cols=165 Identities=19% Similarity=0.186 Sum_probs=118.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
++++||||+|+||++++++|+++|++|++++|...........+.. ....+..+.+|++|.+.+.++++. ..+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~ 74 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAI 74 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCC
Confidence 3689999999999999999999999999887643322222222211 123456778999999998887763 368
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------C-CCC
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------V-GSG 164 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~-~~~ 164 (218)
|+|||+|+...... ..+...+.+++|+.++.++++++ ++.+.++||++||...+.. . ...
T Consensus 75 d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~ 146 (338)
T PRK10675 75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ 146 (338)
T ss_pred CEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence 99999998643221 22345567899999999998876 4555568999998643211 0 235
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecc
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG 198 (218)
..|+.+|.+.+.+++.++++. .++++..+.|+
T Consensus 147 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~ 178 (338)
T PRK10675 147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYF 178 (338)
T ss_pred ChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEee
Confidence 789999999999999987763 35667666653
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=139.27 Aligned_cols=169 Identities=17% Similarity=0.121 Sum_probs=120.0
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCe-EEEecCChh--hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+||||||+|+||++++++|+++|.+ |+.+++... ..... ..+. ....+..+.+|++|.+++++++++. .
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~ 73 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS-DSERYVFEHADICDRAELDRIFAQH------Q 73 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc-cCCceEEEEecCCCHHHHHHHHHhc------C
Confidence 6899999999999999999999975 555555321 11111 1111 1235677899999999998888742 5
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-----CCCeEEEEecCCccC-----------
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-----GVGSIVFISSVGGLS----------- 159 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-----~~~~iv~~ss~~~~~----------- 159 (218)
+|+|||+|+..... .+.+.+++.+++|+.++.++++++.+++... +..++|++||...+.
T Consensus 74 ~d~vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 149 (352)
T PRK10084 74 PDAVMHLAAESHVD----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS 149 (352)
T ss_pred CCEEEECCcccCCc----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence 89999999864321 1223456789999999999999998765321 234799998853221
Q ss_pred ----------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccC
Q 027816 160 ----------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 160 ----------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t 202 (218)
+..+...|+.+|.+.+.+++.+++++ |+++..+.|+.+-.
T Consensus 150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~G 199 (352)
T PRK10084 150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYG 199 (352)
T ss_pred ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeC
Confidence 11234689999999999999998874 66667677765543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.8e-18 Score=138.99 Aligned_cols=164 Identities=21% Similarity=0.251 Sum_probs=119.3
Q ss_pred EEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC----CC--eEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GF--VVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~--~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
||||||+|.||+++++++++.+. +++++++++..+-....++... .. .+..+.+|++|.+.+.+++++.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~---- 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY---- 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence 79999999999999999999985 8999999999988887777421 22 3456689999999988888754
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
++|+|+|.|+.-.... .+. .+.+.+++|+.|+.++++++. +.+..++|++|+--+..| ...|++||.
T Consensus 77 --~pdiVfHaAA~KhVpl-~E~---~p~eav~tNv~GT~nv~~aa~----~~~v~~~v~ISTDKAv~P---tnvmGatKr 143 (293)
T PF02719_consen 77 --KPDIVFHAAALKHVPL-MED---NPFEAVKTNVLGTQNVAEAAI----EHGVERFVFISTDKAVNP---TNVMGATKR 143 (293)
T ss_dssp --T-SEEEE------HHH-HCC---CHHHHHHHHCHHHHHHHHHHH----HTT-SEEEEEEECGCSS-----SHHHHHHH
T ss_pred --CCCEEEEChhcCCCCh-HHh---CHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEccccccCCC---CcHHHHHHH
Confidence 7899999999743222 222 457889999999999999984 456679999999766665 499999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccc
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v 200 (218)
..+.++.+++......+.++.+|.=|=|
T Consensus 144 laE~l~~~~~~~~~~~~t~f~~VRFGNV 171 (293)
T PF02719_consen 144 LAEKLVQAANQYSGNSDTKFSSVRFGNV 171 (293)
T ss_dssp HHHHHHHHHCCTSSSS--EEEEEEE-EE
T ss_pred HHHHHHHHHhhhCCCCCcEEEEEEecce
Confidence 9999999998887556677777775544
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.3e-17 Score=130.57 Aligned_cols=168 Identities=18% Similarity=0.135 Sum_probs=114.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCH-HHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~ 92 (218)
..++|+++||||+|+||+.++++|+++|++|+++.|+.+....... ....+.++.+|+++. +.+ .+.+
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l---~~~~---- 82 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKL---VEAI---- 82 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHH---HHHh----
Confidence 3457899999999999999999999999999999998776543321 123578889999873 332 2222
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC---cCCCCchhhh
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---HVGSGSIYGA 169 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~---~~~~~~~Y~~ 169 (218)
+..+|+||+++|...... . ...+++|+.+..++++++ .+.+.++||++||...+. +.+....|..
T Consensus 83 ~~~~d~vi~~~g~~~~~~--~------~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~ 150 (251)
T PLN00141 83 GDDSDAVICATGFRRSFD--P------FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYIF 150 (251)
T ss_pred hcCCCEEEECCCCCcCCC--C------CCceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchhH
Confidence 125799999988632111 0 112468888988888887 455567999999975332 2233455766
Q ss_pred hHHHHHHHHHHHHHH--hccCCeEEEEeecccccChh
Q 027816 170 TKAAMNQLTRNLACE--WAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 170 sK~a~~~~~~~l~~e--~~~~gv~v~~v~PG~v~t~~ 204 (218)
.|.....+...+..| +...|++++.|+||++.++.
T Consensus 151 ~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~ 187 (251)
T PLN00141 151 LNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDP 187 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCC
Confidence 665444333323333 45679999999999998764
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.2e-17 Score=130.82 Aligned_cols=162 Identities=20% Similarity=0.157 Sum_probs=124.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhh--HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++|||||.|+||+.+++.++++. .+|+.++.-.-. .+.+ ..+ .....+.+++.|+.|.+.+.+++++-
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~----- 73 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV-EDSPRYRFVQGDICDRELVDRLFKEY----- 73 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh-hcCCCceEEeccccCHHHHHHHHHhc-----
Confidence 578999999999999999999876 357777753322 2222 222 22346889999999999988888753
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecC--Ccc-----------Cc
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV--GGL-----------SH 160 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~--~~~-----------~~ 160 (218)
.+|+|+|-|+- ...|-+.++...-+++|+.|++.++++++.++.+ -+++.+|.- .|. -+
T Consensus 74 -~~D~VvhfAAE----SHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp 145 (340)
T COG1088 74 -QPDAVVHFAAE----SHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTP 145 (340)
T ss_pred -CCCeEEEechh----ccccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCC
Confidence 68999999985 3455666777788999999999999999766533 478888872 221 23
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeec
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~P 197 (218)
..+.+||++||++.++|++++.+. +|++++..++
T Consensus 146 ~~PsSPYSASKAasD~lVray~~T---Yglp~~Itrc 179 (340)
T COG1088 146 YNPSSPYSASKAASDLLVRAYVRT---YGLPATITRC 179 (340)
T ss_pred CCCCCCcchhhhhHHHHHHHHHHH---cCCceEEecC
Confidence 456799999999999999999999 5788877765
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-17 Score=136.28 Aligned_cols=159 Identities=25% Similarity=0.244 Sum_probs=121.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++++||||+|+||++++++|+++|++|++++|+.+..... . ...+..+.+|+++.++++++++ .+|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~--------~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA--------GCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh--------CCC
Confidence 4689999999999999999999999999999986653211 1 1247788999999998777665 469
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC---------------
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG--------------- 162 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~--------------- 162 (218)
+|||+|+... .. .+++.+.+++|+.++.++++++. +.+.+++|++||...+...+
T Consensus 67 ~vi~~a~~~~---~~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~ 136 (328)
T TIGR03466 67 ALFHVAADYR---LW---APDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD 136 (328)
T ss_pred EEEEeceecc---cC---CCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence 9999997531 11 12356778899999999999874 44456899999965443211
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
....|+.+|.+.+.+++.++.+ .++++..++|+.+..+
T Consensus 137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~ 174 (328)
T TIGR03466 137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGP 174 (328)
T ss_pred ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCC
Confidence 1357999999999999988776 5899999999877543
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4e-17 Score=134.81 Aligned_cols=168 Identities=21% Similarity=0.236 Sum_probs=122.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+||||||+|+||++++++|+++|++|++++|............... ..+..+.+|+++.++++++++. +++|+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~------~~~d~ 73 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE------HKIDA 73 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence 4799999999999999999999999988876443222222222111 1467788999999998888763 36899
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCchh
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y 167 (218)
|||+||.....+ +.++..+.++.|+.++..+++++ .+.+..++|++||...+.. ..+...|
T Consensus 74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y 145 (328)
T TIGR01179 74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY 145 (328)
T ss_pred EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence 999999643221 23345677899999999999876 4444568999888543321 1234679
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+.+|.+++.+++.++++ ..++++..+.|+.+-.+
T Consensus 146 ~~sK~~~e~~~~~~~~~--~~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 146 GRSKLMSERILRDLSKA--DPGLSYVILRYFNVAGA 179 (328)
T ss_pred HHHHHHHHHHHHHHHHh--ccCCCEEEEecCcccCC
Confidence 99999999999998776 25799999998665443
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.3e-17 Score=136.95 Aligned_cols=169 Identities=13% Similarity=0.078 Sum_probs=120.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+.|+||||||+|.||++++++|+++ |++|++++|+.+.......... .....+.++.+|++|.+.+.++++
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------- 85 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------- 85 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-------
Confidence 4568999999999999999999998 5899999987655433221100 011358888999999988777664
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC------------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV------------ 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~------------ 161 (218)
.+|+|||+|+........ ++..+.+..|+.++.++++++. +.+ .++|++||...+...
T Consensus 86 -~~d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa~----~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~ 155 (386)
T PLN02427 86 -MADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEVYGKTIGSFLPKDHPLR 155 (386)
T ss_pred -cCCEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHHH----hcC-CEEEEEeeeeeeCCCcCCCCCcccccc
Confidence 259999999864322111 1223446689999999998873 333 589999986422110
Q ss_pred ---------------------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 ---------------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 ---------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.....|+.+|.+.+.+++.+++. .|+++..++|+.+-.|.
T Consensus 156 ~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 156 QDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 216 (386)
T ss_pred cccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence 01236999999999999877655 58999999998877653
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=125.15 Aligned_cols=163 Identities=26% Similarity=0.292 Sum_probs=127.3
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v 99 (218)
||||||+|.||++++++|+++|+.|+...|+........... .+....+|+.+.+.++++++.. .+|.|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v 69 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV 69 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence 799999999999999999999999887777665433222211 5788899999999999998876 58999
Q ss_pred EecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-----------CCCchhh
Q 027816 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-----------GSGSIYG 168 (218)
Q Consensus 100 v~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----------~~~~~Y~ 168 (218)
+|+|+... ...+.+...+.++.|+.+..++++++ .+.+..++|++||...+... ....+|+
T Consensus 70 i~~a~~~~----~~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~ 141 (236)
T PF01370_consen 70 IHLAAFSS----NPESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG 141 (236)
T ss_dssp EEEBSSSS----HHHHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred EEeecccc----cccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence 99998632 11223456778889999999999988 44455799999995433221 2346799
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+|...+.+.+.+.++. ++++..+.|+.+-.|.
T Consensus 142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred ccccccccccccccccc---cccccccccccccccc
Confidence 99999999999998884 8999999998887666
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.4e-17 Score=131.11 Aligned_cols=165 Identities=19% Similarity=0.175 Sum_probs=122.1
Q ss_pred EEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 21 LVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 21 lItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
|||||+|.||++|+++|+++| ++|.+.++....... ... .......++.+|++|.+++.++++ ..|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~-~~~~~~~~~~~Di~d~~~l~~a~~--------g~d~ 69 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDL-QKSGVKEYIQGDITDPESLEEALE--------GVDV 69 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhh-hcccceeEEEeccccHHHHHHHhc--------CCce
Confidence 699999999999999999999 688888876654221 111 111223388999999999988887 3599
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------------C
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------------V 161 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------------~ 161 (218)
|+|.|+...... ....++++++|+.|+.++++++ .+.+..++|++||...... .
T Consensus 70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa----~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~ 140 (280)
T PF01073_consen 70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAA----RKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS 140 (280)
T ss_pred EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence 999999643221 2345778999999999999998 4456779999999865443 1
Q ss_pred CCCchhhhhHHHHHHHHHHHHH-Hhc-cCCeEEEEeecccccChhh
Q 027816 162 GSGSIYGATKAAMNQLTRNLAC-EWA-KDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~-e~~-~~gv~v~~v~PG~v~t~~~ 205 (218)
.....|+.||+..|.++..... ++. ...++..+|+|..|--|..
T Consensus 141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d 186 (280)
T PF01073_consen 141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGD 186 (280)
T ss_pred cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccc
Confidence 1335799999999999877654 111 1259999999988876643
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-16 Score=132.20 Aligned_cols=169 Identities=15% Similarity=0.127 Sum_probs=122.0
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+.+.-++|+||||||+|.||++++++|.++|++|++++|...... ......+....+|+++.+.+.+++.
T Consensus 15 ~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~---- 84 (370)
T PLN02695 15 PYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVTK---- 84 (370)
T ss_pred CCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHHh----
Confidence 444457899999999999999999999999999999998643211 0111124567789999887665543
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------- 159 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~----------- 159 (218)
.+|+|||+|+.......... +....++.|+.++.++++++ ++.+..++|++||...+.
T Consensus 85 ----~~D~Vih~Aa~~~~~~~~~~---~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~~ 153 (370)
T PLN02695 85 ----GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVSL 153 (370)
T ss_pred ----CCCEEEEcccccCCcccccc---CchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCCc
Confidence 36999999986432222111 12345678999999999987 444456899999853211
Q ss_pred ------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 160 ------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 160 ------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+..+..+|+.+|.+.+.+++.++.. .|+++..+.|+.+-.|
T Consensus 154 ~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp 200 (370)
T PLN02695 154 KESDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGP 200 (370)
T ss_pred CcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCC
Confidence 2234568999999999999988776 5899999999877665
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-16 Score=132.35 Aligned_cols=165 Identities=16% Similarity=0.143 Sum_probs=120.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH--HHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK--CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..++++++||||+|+||++++++|+++|++|++++|+.+.... ..++.......+..+.+|++|.+++.++++..
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~--- 133 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE--- 133 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---
Confidence 3457899999999999999999999999999999998764321 11111122235788899999999998888754
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
++.+|+||||++..... . .+.+++|+.++.++++++ ++.+..+||++||..... ....|..+|
T Consensus 134 -~~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~~~~~sK 196 (390)
T PLN02657 134 -GDPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLLEFQRAK 196 (390)
T ss_pred -CCCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cchHHHHHH
Confidence 12689999998842211 0 123467888888888877 455567899999986543 345788899
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
...+...+. ...+++...|+|+.+..+
T Consensus 197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~ 223 (390)
T PLN02657 197 LKFEAELQA-----LDSDFTYSIVRPTAFFKS 223 (390)
T ss_pred HHHHHHHHh-----ccCCCCEEEEccHHHhcc
Confidence 988877654 246899999999876543
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=127.35 Aligned_cols=161 Identities=14% Similarity=0.129 Sum_probs=115.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCC-CHHHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-SPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~~~~~~~ 95 (218)
|+||||||+|.||++++++|+++ |++|++++|+.+...... . ...+.++.+|++ +.+.+.++++ .
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~~--------~ 68 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----N-HPRMHFFEGDITINKEWIEYHVK--------K 68 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----c-CCCeEEEeCCCCCCHHHHHHHHc--------C
Confidence 57999999999999999999986 699999998764332211 1 134778889998 5665544433 4
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC--------------
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-------------- 161 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-------------- 161 (218)
+|+|||+|+...+.. ..++.+..+++|+.++.++++++. +.+ .++|++||...+...
T Consensus 69 ~d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa~----~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~ 139 (347)
T PRK11908 69 CDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY 139 (347)
T ss_pred CCEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHHH----hcC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence 799999998643221 122345678999999999999874 333 589999996432210
Q ss_pred ----CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 162 ----GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 162 ----~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.....|+.+|.+.+.+.+.++.+ .|+++..+.|+.+-.|
T Consensus 140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp 182 (347)
T PRK11908 140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGP 182 (347)
T ss_pred CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCC
Confidence 11236999999999999988766 5788888888665443
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=127.12 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=115.1
Q ss_pred EEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhH---HHHHHHhhhC-------C-CeEEEEEeeCCCHHH--HHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVEL---NKCLKEWQSK-------G-FVVSGSVCDAASPDQ--REK 83 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~---~~~~~~~~~~-------~-~~v~~~~~D~~~~~~--~~~ 83 (218)
+|+||||+|+||++++++|+++| ++|+++.|+.+.. +...+.+... . ..+..+.+|+++..- -.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 6899999876532 1222222110 0 468888999886421 001
Q ss_pred HHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC--
Q 027816 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-- 161 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-- 161 (218)
.+..+. ..+|.|||+|+.... . ..+.+.+++|+.++.++++.+. +.+..+++++||.......
T Consensus 81 ~~~~~~----~~~d~vih~a~~~~~----~---~~~~~~~~~nv~g~~~ll~~a~----~~~~~~~v~iSS~~v~~~~~~ 145 (367)
T TIGR01746 81 EWERLA----ENVDTIVHNGALVNW----V---YPYSELRAANVLGTREVLRLAA----SGRAKPLHYVSTISVLAAIDL 145 (367)
T ss_pred HHHHHH----hhCCEEEeCCcEecc----C---CcHHHHhhhhhHHHHHHHHHHh----hCCCceEEEEccccccCCcCC
Confidence 122221 357999999986421 1 1245667899999999998873 3444569999997654321
Q ss_pred --------------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 162 --------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 162 --------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.....|+.+|.+.+.+++.++. .|++++.++||.+..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 146 STVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN 197 (367)
T ss_pred CCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence 1134799999999998876544 3899999999999875
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=122.04 Aligned_cols=156 Identities=26% Similarity=0.264 Sum_probs=122.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH---HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN---KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||||||+|.||++.+.+|.++|+.|++++.-..... ...+.+...+..+.+.+.|++|.+.++++|++.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~----- 76 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV----- 76 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence 579999999999999999999999999999875333222 222333344578999999999999999999976
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cCC
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVG 162 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~~ 162 (218)
.+|.|+|-|+....+ .+.+...++...|+.|+++++..+ ++.+...+|+.||.+-+. +..
T Consensus 77 -~fd~V~Hfa~~~~vg----eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~ 147 (343)
T KOG1371|consen 77 -KFDAVMHFAALAAVG----ESMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTD 147 (343)
T ss_pred -CCceEEeehhhhccc----hhhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCC
Confidence 589999999975433 355666899999999999999987 555566888888854332 122
Q ss_pred -CCchhhhhHHHHHHHHHHHHHHhc
Q 027816 163 -SGSIYGATKAAMNQLTRNLACEWA 186 (218)
Q Consensus 163 -~~~~Y~~sK~a~~~~~~~l~~e~~ 186 (218)
+..+||.+|.+++.+.+.+..-+.
T Consensus 148 ~p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 148 QPTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred CCCCcchhhhHHHHHHHHhhhcccc
Confidence 668999999999999998887753
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.5e-15 Score=137.34 Aligned_cols=170 Identities=14% Similarity=0.074 Sum_probs=122.9
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhC--CCeEEEecCCh--hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++|+||||||+|+||++++++|+++ |++|+.++|.. +........ .....+..+.+|++|.+.+..++..
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~--- 78 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT--- 78 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh---
Confidence 35689999999999999999999998 57898888753 122211111 1123578889999998887665432
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccC----------
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS---------- 159 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~---------- 159 (218)
..+|+|||+|+.... +.+.++..+.+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 79 ---~~~D~ViHlAa~~~~----~~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~~~~~ 147 (668)
T PLN02260 79 ---EGIDTIMHFAAQTHV----DNSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDADVGN 147 (668)
T ss_pred ---cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCccccccCc
Confidence 368999999996432 2223344577899999999999987 3333 46899999954321
Q ss_pred ----cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 160 ----HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 160 ----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+..+..+|+.+|.+.+.+++.+.++ .++++.++.|+.+-.|
T Consensus 148 ~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp 192 (668)
T PLN02260 148 HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGP 192 (668)
T ss_pred cccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCc
Confidence 1113467999999999999988777 4789999999877554
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=125.28 Aligned_cols=159 Identities=18% Similarity=0.228 Sum_probs=108.5
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh--hcCCccc
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS--KFNGKLN 97 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~~~~~id 97 (218)
||||||+|.||++++++|+++|++++++.|+....... .. ...+|+.|..+.+++++.+.+ .+ +++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDF-GDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence 79999999999999999999999655554443322111 11 123566666555555555432 12 3689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~ 166 (218)
+|||+|+..... +.+ ....++.|+.++.++++++. +.+. ++|++||.+.+.. ..+..+
T Consensus 71 ~Vih~A~~~~~~---~~~---~~~~~~~n~~~t~~ll~~~~----~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~ 139 (308)
T PRK11150 71 AIFHEGACSSTT---EWD---GKYMMDNNYQYSKELLHYCL----EREI-PFLYASSAATYGGRTDDFIEEREYEKPLNV 139 (308)
T ss_pred EEEECceecCCc---CCC---hHHHHHHHHHHHHHHHHHHH----HcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence 999999864322 112 23468999999999999883 4443 6999998643221 223468
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
|+.+|.+.+.+++.++.+ .++++..+.|+.+-.|
T Consensus 140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~ 173 (308)
T PRK11150 140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGP 173 (308)
T ss_pred HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCC
Confidence 999999999998888766 4788888888766544
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=136.44 Aligned_cols=163 Identities=14% Similarity=0.123 Sum_probs=118.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHH-HHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ-REKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~~~ 93 (218)
++|+||||||+|.||++++++|+++ |++|+.++|......... . ...+..+.+|++|.++ ++++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~----~-~~~~~~~~gDl~d~~~~l~~~l~------- 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL----G-HPRFHFVEGDISIHSEWIEYHIK------- 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc----C-CCceEEEeccccCcHHHHHHHhc-------
Confidence 5789999999999999999999986 799999998765432211 1 2347778899998655 333332
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc---------C---
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------V--- 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---------~--- 161 (218)
.+|+|||+|+...... ..++..+.+++|+.++.++++++. +.+ .++|++||...+.. .
T Consensus 382 -~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~~t~~ll~a~~----~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~ 451 (660)
T PRK08125 382 -KCDVVLPLVAIATPIE----YTRNPLRVFELDFEENLKIIRYCV----KYN-KRIIFPSTSEVYGMCTDKYFDEDTSNL 451 (660)
T ss_pred -CCCEEEECccccCchh----hccCHHHHHHhhHHHHHHHHHHHH----hcC-CeEEEEcchhhcCCCCCCCcCcccccc
Confidence 4799999999754321 112334578899999999999984 333 58999999543210 0
Q ss_pred ---C---CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 162 ---G---SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 162 ---~---~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+ ....|+.||.+.+.+++.++++ +|+++..+.|+.+.-|
T Consensus 452 ~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp 496 (660)
T PRK08125 452 IVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGP 496 (660)
T ss_pred ccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCC
Confidence 1 1236999999999999988777 4789999999887665
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=125.54 Aligned_cols=162 Identities=26% Similarity=0.250 Sum_probs=118.9
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
.||||||+|.||++++++|.++|++|+.++|......... ..+..+.+|+++.+...+..+.. . |+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~------~-d~ 67 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGV------P-DA 67 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcC------C-CE
Confidence 4999999999999999999999999999999776644322 24667788988885554444422 2 99
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-------------CCCc
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-------------GSGS 165 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-------------~~~~ 165 (218)
|+|+|+........ .+ +..+.+.+|+.++.++++++ ++.+..++|+.||.+...+. ....
T Consensus 68 vih~aa~~~~~~~~-~~--~~~~~~~~nv~gt~~ll~aa----~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~ 140 (314)
T COG0451 68 VIHLAAQSSVPDSN-AS--DPAEFLDVNVDGTLNLLEAA----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN 140 (314)
T ss_pred EEEccccCchhhhh-hh--CHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence 99999975322111 11 45568899999999999998 44556789996664433311 1112
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+|+.+|...+.+++.+.. ..|+++..+.|+.+--|.
T Consensus 141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~ 176 (314)
T COG0451 141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPG 176 (314)
T ss_pred HHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCC
Confidence 599999999999999988 368999999998765544
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.5e-15 Score=128.52 Aligned_cols=160 Identities=18% Similarity=0.166 Sum_probs=111.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH-HHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK-CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++|+||||||+|.||++++++|+++|++|++++|......+ ....+ ....+..+..|+.+.. + .
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l--------~ 182 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L--------L 182 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h--------c
Confidence 56899999999999999999999999999998875332221 11111 1234666777875542 1 2
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC---------------
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------------- 159 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--------------- 159 (218)
.+|+|||+|+...+.. ..++..+.+++|+.++.++++++. +.+ .++|++||...+.
T Consensus 183 ~~D~ViHlAa~~~~~~----~~~~p~~~~~~Nv~gt~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~ 253 (442)
T PLN02206 183 EVDQIYHLACPASPVH----YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLQHPQVETYWGNV 253 (442)
T ss_pred CCCEEEEeeeecchhh----hhcCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECChHHhCCCCCCCCCccccccC
Confidence 4799999998643211 112346788999999999999883 334 3899999965332
Q ss_pred -cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccC
Q 027816 160 -HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 160 -~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t 202 (218)
+......|+.+|.+.+.+++.+.++ .++++..+.|+.+--
T Consensus 254 ~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyG 294 (442)
T PLN02206 254 NPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYG 294 (442)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccC
Confidence 1112467999999999999887666 478888887755543
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.2e-15 Score=120.46 Aligned_cols=142 Identities=20% Similarity=0.250 Sum_probs=108.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+++||||+|+||++++++|+++|++|++++|+ .+|+.+.+++.++++.. .+|+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~------~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI------RPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC------CCCE
Confidence 37999999999999999999999999999885 37999999988887642 5899
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCchh
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y 167 (218)
|||+|+..... .........+++|+.++.++++++. +.+ .++|++||...+.+ ......|
T Consensus 54 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 124 (287)
T TIGR01214 54 VVNTAAYTDVD----GAESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY 124 (287)
T ss_pred EEECCcccccc----ccccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence 99999864321 1122355678999999999999873 333 38999998643211 1234689
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+.+|.+.+.+++.+ +.++..++|+.+-.+
T Consensus 125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~ 153 (287)
T TIGR01214 125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGG 153 (287)
T ss_pred hHHHHHHHHHHHHh-------CCCeEEEEeeecccC
Confidence 99999999888765 457889999887654
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.1e-15 Score=121.56 Aligned_cols=133 Identities=18% Similarity=0.199 Sum_probs=99.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|.||++++++|+++| +|+.++|... .+..|++|.+.++++++.. ++|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~------~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI------RPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc------CCC
Confidence 469999999999999999999999 7888887531 1247999999988877742 579
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cCCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~~~~~~ 166 (218)
+|||+|+..... ...++....+.+|+.++.++++++. +.+ .++|++||..-+. +..+..+
T Consensus 57 ~Vih~Aa~~~~~----~~~~~~~~~~~~N~~~~~~l~~aa~----~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~ 127 (299)
T PRK09987 57 VIVNAAAHTAVD----KAESEPEFAQLLNATSVEAIAKAAN----EVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV 127 (299)
T ss_pred EEEECCccCCcc----hhhcCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence 999999964321 1223346677899999999999883 333 4789988853221 1223467
Q ss_pred hhhhHHHHHHHHHHHHH
Q 027816 167 YGATKAAMNQLTRNLAC 183 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~ 183 (218)
|+.+|.+.+.+++.+..
T Consensus 128 Yg~sK~~~E~~~~~~~~ 144 (299)
T PRK09987 128 YGETKLAGEKALQEHCA 144 (299)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 99999999999876543
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.9e-15 Score=122.19 Aligned_cols=147 Identities=14% Similarity=0.103 Sum_probs=108.7
Q ss_pred EEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEEE
Q 027816 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILV 100 (218)
Q Consensus 21 lItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vv 100 (218)
|||||+|.||++++++|+++|++|+++.+. ..+|+++.++++++++.. .+|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~------~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE------KPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc------CCCEEE
Confidence 699999999999999999999987665432 137999999888776642 579999
Q ss_pred ecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc---------------C-CCC
Q 027816 101 NNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------------V-GSG 164 (218)
Q Consensus 101 ~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---------------~-~~~ 164 (218)
|+|+...... ...++..+.++.|+.++.++++++ .+.+..++|++||..-+.+ . |..
T Consensus 55 h~A~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~ 127 (306)
T PLN02725 55 LAAAKVGGIH---ANMTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN 127 (306)
T ss_pred Eeeeeecccc---hhhhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence 9998642111 111233466889999999999988 4445568999988643221 1 112
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..|+.+|.+.+.+.+.+.++ .++++..+.|+.+-.|
T Consensus 128 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~ 163 (306)
T PLN02725 128 EWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGP 163 (306)
T ss_pred chHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCC
Confidence 34999999999999888776 4789999999877655
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.1e-15 Score=126.04 Aligned_cols=162 Identities=17% Similarity=0.129 Sum_probs=111.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+.++|+||||+|.||++++++|+++|++|++++|...........+. ....+..+..|+.+.. + ..
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~--------~~ 184 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF-GNPRFELIRHDVVEPI-----L--------LE 184 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc-cCCceEEEECcccccc-----c--------cC
Confidence 34689999999999999999999999999999876432221111111 1234666777775431 1 24
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC----------------
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------------- 159 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~---------------- 159 (218)
+|+|||+|+....... ..+..+.+++|+.++.++++++. +.+ .++|++||.+.+.
T Consensus 185 ~D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~ 255 (436)
T PLN02166 185 VDQIYHLACPASPVHY----KYNPVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVN 255 (436)
T ss_pred CCEEEECceeccchhh----ccCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence 7999999986432211 12346788999999999999884 333 3899998864221
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+......|+.+|.+.+.+++.+.+. .++++..+.|+.+--|
T Consensus 256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp 296 (436)
T PLN02166 256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGP 296 (436)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCC
Confidence 1112356999999999999988766 4788888877655443
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=119.23 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=110.4
Q ss_pred EEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
||||||+|.||++++++|.++|+ +|++++|..... .. ..+. ...+..|+.+.+.++.+.+. .+ ..+|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~~~~~~d~~~~~~~~~~~~~---~~-~~~D~ 69 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----DLVIADYIDKEDFLDRLEKG---AF-GKIEA 69 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----heeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence 68999999999999999999997 788887654321 11 1111 12345677777666655542 22 47899
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCchh
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y 167 (218)
|||+|+... .+.+++...+++|+.++.++++.+. +.+ .++|++||...+.. ..+...|
T Consensus 70 vvh~A~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y 138 (314)
T TIGR02197 70 IFHQGACSD------TTETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAATYGDGEAGFREGRELERPLNVY 138 (314)
T ss_pred EEECccccC------ccccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence 999999632 1223456788999999999999874 333 37999998643321 1245689
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+.+|.+.+.+++.+..+. ..++++..+.|+.+-.|
T Consensus 139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~ 173 (314)
T TIGR02197 139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGP 173 (314)
T ss_pred HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCC
Confidence 999999999998644332 23567777777655443
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.7e-14 Score=113.01 Aligned_cols=184 Identities=13% Similarity=0.107 Sum_probs=150.7
Q ss_pred CcEEEEecC-CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC-
Q 027816 17 GMTALVTGG-TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG- 94 (218)
Q Consensus 17 ~k~vlItGa-~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~- 94 (218)
..+|+|.|. +..|++.+|.-|-++|+-|+++..+.++.+...++ ...++.....|..+..++...+.++.+.+..
T Consensus 3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e---~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p 79 (299)
T PF08643_consen 3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE---DRPDIRPLWLDDSDPSSIHASLSRFASLLSRP 79 (299)
T ss_pred eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc---cCCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence 358999995 79999999999999999999999988765443322 2556888888887777777777766655421
Q ss_pred ------------cccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh---CCCCeEEE-EecCCc
Q 027816 95 ------------KLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA---SGVGSIVF-ISSVGG 157 (218)
Q Consensus 95 ------------~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~---~~~~~iv~-~ss~~~ 157 (218)
.+..|+...... ..++++.++.+.|.+.++.|+..++..++.++|+++. ++ .+||+ .-|+.+
T Consensus 80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~-~~iil~~Psi~s 158 (299)
T PF08643_consen 80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQK-SKIILFNPSISS 158 (299)
T ss_pred CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-ceEEEEeCchhh
Confidence 345666666543 5689999999999999999999999999999999998 44 45544 557888
Q ss_pred cCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 158 LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
....|..++-.....++.+|.+.|++|+.+.+|+|..+..|.++-..
T Consensus 159 sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~ 205 (299)
T PF08643_consen 159 SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGN 205 (299)
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeecccc
Confidence 88999999999999999999999999999999999999999887663
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.1e-14 Score=115.69 Aligned_cols=148 Identities=15% Similarity=0.109 Sum_probs=108.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++|+||||+|.||++++++|+++|++|.+++|+.+...... . ..+..+.+|++|.+++.++++ .+|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~--~~v~~v~~Dl~d~~~l~~al~--------g~d 66 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----E--WGAELVYGDLSLPETLPPSFK--------GVT 66 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----h--cCCEEEECCCCCHHHHHHHHC--------CCC
Confidence 36999999999999999999999999999999875432211 1 136778999999998776665 369
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
+|||+++... . +.....++|+.++.++++++ ++.+..++|++||..+.. .+..+|..+|...+.+
T Consensus 67 ~Vi~~~~~~~----~-----~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~ 131 (317)
T CHL00194 67 AIIDASTSRP----S-----DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQK 131 (317)
T ss_pred EEEECCCCCC----C-----CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc--cCCChHHHHHHHHHHH
Confidence 9999876321 1 12234567888998888887 555666999999854321 2346788899887776
Q ss_pred HHHHHHHhccCCeEEEEeeccccc
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
.+ ..+++...+.|+.+.
T Consensus 132 l~-------~~~l~~tilRp~~~~ 148 (317)
T CHL00194 132 LK-------KSGIPYTIFRLAGFF 148 (317)
T ss_pred HH-------HcCCCeEEEeecHHh
Confidence 53 257999999998553
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.4e-14 Score=112.16 Aligned_cols=163 Identities=17% Similarity=0.171 Sum_probs=98.2
Q ss_pred EecCCCchHHHHHHHHHhCCC--eEEEecCChhh---HHHHHHHhh----------hCCCeEEEEEeeCCCHHH--HHHH
Q 027816 22 VTGGTRGIGQATVEELAGLGA--VVHTCSRNEVE---LNKCLKEWQ----------SKGFVVSGSVCDAASPDQ--REKL 84 (218)
Q Consensus 22 ItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~---~~~~~~~~~----------~~~~~v~~~~~D~~~~~~--~~~~ 84 (218)
||||+|.+|.++.++|++++. +|+++.|.... .++..+.+. ....+++.+..|++++.- -++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999886 89999987643 222222221 125689999999998530 1112
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC--c--
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--H-- 160 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--~-- 160 (218)
++.+.+ .+|.|||+|+...... +..+..++|+.|+.++++.+. +.+..+++++||..... .
T Consensus 81 ~~~L~~----~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa~v~~~~~~~ 145 (249)
T PF07993_consen 81 YQELAE----EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTAYVAGSRPGT 145 (249)
T ss_dssp HHHHHH----H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHT----SSS---EEEEEEGGGTTS-TTT
T ss_pred hhcccc----ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHH----hccCcceEEeccccccCCCCCc
Confidence 233322 4699999999643221 233467899999999999883 33334899999832111 1
Q ss_pred ----------------CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccC
Q 027816 161 ----------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 161 ----------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t 202 (218)
......|..||...|.+.+..+.+ .|+++..++||.|-.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG 200 (249)
T ss_dssp --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence 122367999999999999988876 589999999998865
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.2e-13 Score=121.98 Aligned_cols=162 Identities=23% Similarity=0.219 Sum_probs=112.6
Q ss_pred cEEEEecCCCchHHHHHHHHH--hCCCeEEEecCChhh--HHHHHHHhhhCCCeEEEEEeeCCCHHHH--HHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELA--GLGAVVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDAASPDQR--EKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~--~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~~--~~~~~~~~~~ 91 (218)
++||||||+|.||++++++|+ ++|++|++++|+... .......+ ....+..+..|+++.+.. .+.++++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~~~l--- 75 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYW--GADRVVPLVGDLTEPGLGLSEADIAEL--- 75 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhc--CCCcEEEEecccCCccCCcCHHHHHHh---
Confidence 379999999999999999999 588999999996533 11211111 114578889999985310 1112222
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------- 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------- 160 (218)
..+|+|||+|+..... .+ ..+..++|+.++.++++++ .+.+..++|++||...+..
T Consensus 76 --~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~ 142 (657)
T PRK07201 76 --GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFREDDFD 142 (657)
T ss_pred --cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccccch
Confidence 2579999999964321 12 3456789999999999887 4444568999998654321
Q ss_pred --CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 161 --VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.....+|+.+|...+.+.+. ..|+++..+.|+.+-.+
T Consensus 143 ~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~ 181 (657)
T PRK07201 143 EGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD 181 (657)
T ss_pred hhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence 11235699999999988752 25899999999988553
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.7e-13 Score=116.26 Aligned_cols=167 Identities=20% Similarity=0.174 Sum_probs=114.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC---eEEEecCChhh---HHHHHHHh---------hh----C-----CCeEEE
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVE---LNKCLKEW---------QS----K-----GFVVSG 70 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~~---------~~----~-----~~~v~~ 70 (218)
++||+|+||||+|.||+.++++|++.+. +|++..|.... .+....++ .. . ..++..
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 5789999999999999999999998652 57777775431 11111111 00 0 157889
Q ss_pred EEeeCCC-------HHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh
Q 027816 71 SVCDAAS-------PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA 143 (218)
Q Consensus 71 ~~~D~~~-------~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~ 143 (218)
+..|+++ .+.++++++ .+|+|||+|+.... . ++....+++|+.|+.++++++...
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~--------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~~--- 150 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWK--------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKKC--- 150 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHh--------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence 9999984 333334333 47999999996431 1 235678899999999999987321
Q ss_pred CCCCeEEEEecCCccCcC--------------------------------------------------------------
Q 027816 144 SGVGSIVFISSVGGLSHV-------------------------------------------------------------- 161 (218)
Q Consensus 144 ~~~~~iv~~ss~~~~~~~-------------------------------------------------------------- 161 (218)
.+..++|++||...+...
T Consensus 151 ~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (491)
T PLN02996 151 VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLH 230 (491)
T ss_pred CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhC
Confidence 234578998886432110
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
....+|+.||+..|.+++..+ .++++..+.|+.|-.+.
T Consensus 231 ~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~ 268 (491)
T PLN02996 231 GWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTY 268 (491)
T ss_pred CCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCC
Confidence 012469999999999996542 37999999999886654
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.3e-12 Score=99.40 Aligned_cols=141 Identities=18% Similarity=0.203 Sum_probs=105.0
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v 99 (218)
|+|+||+|.+|+.++++|+++|++|.++.|++++.+. ...+..+++|+.|.+++.+.++ ..|.|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~--------~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK--------GADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT--------TSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh--------hcchh
Confidence 7899999999999999999999999999999987665 3468899999999988777666 36999
Q ss_pred EecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC---------chhhhh
Q 027816 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG---------SIYGAT 170 (218)
Q Consensus 100 v~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~---------~~Y~~s 170 (218)
|+++|.... + ...++.++..+++.+..++|++|+.......+.. ..|...
T Consensus 65 i~~~~~~~~--------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (183)
T PF13460_consen 65 IHAAGPPPK--------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD 123 (183)
T ss_dssp EECCHSTTT--------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred hhhhhhhcc--------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence 999874221 1 2333444444466677799999987755543331 356666
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
|...+.+. + ..+++...|+||++..+.
T Consensus 124 ~~~~e~~~----~---~~~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 124 KREAEEAL----R---ESGLNWTIVRPGWIYGNP 150 (183)
T ss_dssp HHHHHHHH----H---HSTSEEEEEEESEEEBTT
T ss_pred HHHHHHHH----H---hcCCCEEEEECcEeEeCC
Confidence 65555443 2 248999999999987764
|
... |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.5e-13 Score=109.52 Aligned_cols=138 Identities=20% Similarity=0.177 Sum_probs=93.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.|++|||||+|.||++++++|+++|++|+... .|+.+.+.+...++. .++
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~ 58 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKP 58 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCC
Confidence 36899999999999999999999999886431 234455555444442 258
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecC--CccC---------------
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV--GGLS--------------- 159 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~--~~~~--------------- 159 (218)
|+|||+||...... .+...++..+.+++|+.++.++++++. +.+. +++++||. .+..
T Consensus 59 D~ViH~Aa~~~~~~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~ 132 (298)
T PLN02778 59 THVFNAAGVTGRPN-VDWCESHKVETIRANVVGTLTLADVCR----ERGL-VLTNYATGCIFEYDDAHPLGSGIGFKEED 132 (298)
T ss_pred CEEEECCcccCCCC-chhhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence 99999999753221 112234567789999999999999984 3333 34444432 2110
Q ss_pred -cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEE
Q 027816 160 -HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193 (218)
Q Consensus 160 -~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~ 193 (218)
+.+....|+.+|.+.+.+++.++.. .++|+.
T Consensus 133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~~ 164 (298)
T PLN02778 133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRVR 164 (298)
T ss_pred CCCCCCCchHHHHHHHHHHHHHhhcc---EEeeec
Confidence 1112367999999999999887643 466663
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.6e-12 Score=93.70 Aligned_cols=183 Identities=20% Similarity=0.196 Sum_probs=125.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC-c
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG-K 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~-~ 95 (218)
-.+|+|-|+-|.+|++++..|-.++|-|.-++-.+.+-. ...+ .+..|-+=.|+-+.+.+++.+.+++ +
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A---------d~sI-~V~~~~swtEQe~~v~~~vg~sL~gek 72 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA---------DSSI-LVDGNKSWTEQEQSVLEQVGSSLQGEK 72 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc---------cceE-EecCCcchhHHHHHHHHHHHHhhcccc
Confidence 357899999999999999999999998877765443211 0111 1223333345555566666665543 7
Q ss_pred ccEEEecCCCCCCCCCCCCC-HHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYS-AEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~-~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
+|.|+|.||....+.-...+ ..+-+-++...+.....-.+....+++.. |-+-....-++..+.|++-.|+..|+|+
T Consensus 73 vDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G--GLL~LtGAkaAl~gTPgMIGYGMAKaAV 150 (236)
T KOG4022|consen 73 VDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG--GLLQLTGAKAALGGTPGMIGYGMAKAAV 150 (236)
T ss_pred cceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC--ceeeecccccccCCCCcccchhHHHHHH
Confidence 99999999876554322111 11223344555555555555555555432 4555566667788999999999999999
Q ss_pred HHHHHHHHHHhc--cCCeEEEEeecccccChhhHHHHhc
Q 027816 175 NQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERVMFS 211 (218)
Q Consensus 175 ~~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~~~~~ 211 (218)
+.++++|+.+-. +.|--+.+|.|-..||||.|+.|.+
T Consensus 151 HqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ 189 (236)
T KOG4022|consen 151 HQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPN 189 (236)
T ss_pred HHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCC
Confidence 999999999853 4467889999999999999998854
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=119.08 Aligned_cols=132 Identities=18% Similarity=0.180 Sum_probs=102.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+|+||++++++|+++|++|++++|+.... . ...+..+.+|+++.+++.++++ .+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~--------~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT--------GAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh--------CCC
Confidence 4699999999999999999999999999999875321 1 1136778899999999877765 369
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
+|||+|+.... .+++|+.++.++++++ ++.+.++||++||.. |.+.+.+
T Consensus 64 ~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~l 112 (854)
T PRK05865 64 VVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQM 112 (854)
T ss_pred EEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHH
Confidence 99999975321 3678999998888776 555567999999853 8777766
Q ss_pred HHHHHHHhccCCeEEEEeecccccChh
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+ + .++++..+.|+.+-.|-
T Consensus 113 l~----~---~gl~~vILRp~~VYGP~ 132 (854)
T PRK05865 113 LA----D---CGLEWVAVRCALIFGRN 132 (854)
T ss_pred HH----H---cCCCEEEEEeceEeCCC
Confidence 53 2 48999999999887653
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.5e-13 Score=109.29 Aligned_cols=172 Identities=19% Similarity=0.197 Sum_probs=124.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++.+++||||+|.+|++++.+|.+++ .+|.+.+.......-..++.......+..+++|+.+..++...++
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------- 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------- 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence 46799999999999999999999999 689999887652221122221245678999999999888777666
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC------------cC
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------HV 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------~~ 161 (218)
+ . .|+|+|+...+ +....+-+..+++|+.|+.+++.++ .+.+..++|++||..-.. +.
T Consensus 76 ~-~-~Vvh~aa~~~~----~~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~ 145 (361)
T KOG1430|consen 76 G-A-VVVHCAASPVP----DFVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDESLPY 145 (361)
T ss_pred C-c-eEEEeccccCc----cccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCCCCCC
Confidence 3 3 67777765332 2223356678899999999999988 666777999999965332 22
Q ss_pred C--CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 162 G--SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 162 ~--~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
| ...+|+.||+-.|.+++.... ..+....++.|-.|--|--++
T Consensus 146 p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~ 190 (361)
T KOG1430|consen 146 PLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKR 190 (361)
T ss_pred ccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcc
Confidence 2 235899999999999876654 346889999997765554443
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.8e-13 Score=108.74 Aligned_cols=143 Identities=20% Similarity=0.242 Sum_probs=100.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
+++||||++|.||.++.++|.++|++|+.+.|+ .+|++|.+.+.+++.+. ++|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd 53 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPD 53 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------S
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCC
Confidence 479999999999999999999999999999876 48999999998888866 689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~ 166 (218)
+|||+|+... .+...++.+..+.+|+.++.++++.+ .+. ..++|++||..-+.+ ..+...
T Consensus 54 ~Vin~aa~~~----~~~ce~~p~~a~~iN~~~~~~la~~~----~~~-~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~ 124 (286)
T PF04321_consen 54 VVINCAAYTN----VDACEKNPEEAYAINVDATKNLAEAC----KER-GARLIHISTDYVFDGDKGGPYTEDDPPNPLNV 124 (286)
T ss_dssp EEEE----------HHHHHHSHHHHHHHHTHHHHHHHHHH----HHC-T-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred eEeccceeec----HHhhhhChhhhHHHhhHHHHHHHHHH----HHc-CCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence 9999998631 12233456778999999999999988 333 369999999543322 223478
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
|+.+|...|...+... . +...++++++-.+
T Consensus 125 YG~~K~~~E~~v~~~~------~-~~~IlR~~~~~g~ 154 (286)
T PF04321_consen 125 YGRSKLEGEQAVRAAC------P-NALILRTSWVYGP 154 (286)
T ss_dssp HHHHHHHHHHHHHHH-------S-SEEEEEE-SEESS
T ss_pred HHHHHHHHHHHHHHhc------C-CEEEEecceeccc
Confidence 9999999998877621 1 5566666665444
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.5e-12 Score=104.88 Aligned_cols=168 Identities=21% Similarity=0.235 Sum_probs=114.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChh---hHHHHHHHhh-------hCCCeEEEEEeeCCCHH--HHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEV---ELNKCLKEWQ-------SKGFVVSGSVCDAASPD--QREKL 84 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~---~~~~~~~~~~-------~~~~~v~~~~~D~~~~~--~~~~~ 84 (218)
+++|+|||+|++|+.+.++|+.+- ++|++..|-.+ ..+++.+.+. .....++.+..|++.++ --+.-
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 478999999999999999999764 68888877544 2333333332 23568999999998322 11122
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc----
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---- 160 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---- 160 (218)
++++. ..+|.|+|||+.... -.+. .+....||.|+..+++.+ ...+...+.++||++....
T Consensus 81 ~~~La----~~vD~I~H~gA~Vn~----v~pY---s~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~~~~~~ 145 (382)
T COG3320 81 WQELA----ENVDLIIHNAALVNH----VFPY---SELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGETEYYS 145 (382)
T ss_pred HHHHh----hhcceEEecchhhcc----cCcH---HHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeeccccccC
Confidence 33332 257999999986321 1223 344579999999999987 4444445899998753321
Q ss_pred ----------------CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 161 ----------------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 161 ----------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
....+.|+-||.+.|-+++... ..|+++..+.||.|-.+-
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~gds 201 (382)
T COG3320 146 NFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYITGDS 201 (382)
T ss_pred CCccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeeeccC
Confidence 1223789999999998876543 349999999999985543
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.4e-12 Score=101.69 Aligned_cols=127 Identities=20% Similarity=0.269 Sum_probs=102.4
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
.+||||++|-+|.+|++.|. .+.+|+.++|.+ +|++|.+.+.+++.+. +||+
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~------~PDv 53 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET------RPDV 53 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh------CCCE
Confidence 38999999999999999998 668999888765 7999999999999876 7899
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCchh
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y 167 (218)
|||+|++.. .+....+.+..+.+|..++.++++++ ++.+ ..+|++|+-+-+.+ ..+...|
T Consensus 54 VIn~AAyt~----vD~aE~~~e~A~~vNa~~~~~lA~aa----~~~g-a~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvY 124 (281)
T COG1091 54 VINAAAYTA----VDKAESEPELAFAVNATGAENLARAA----AEVG-ARLVHISTDYVFDGEKGGPYKETDTPNPLNVY 124 (281)
T ss_pred EEECccccc----cccccCCHHHHHHhHHHHHHHHHHHH----HHhC-CeEEEeecceEecCCCCCCCCCCCCCCChhhh
Confidence 999999743 23334456788999999999999998 4433 58999998443322 3345789
Q ss_pred hhhHHHHHHHHHHHH
Q 027816 168 GATKAAMNQLTRNLA 182 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~ 182 (218)
+.||.+.|..++...
T Consensus 125 G~sKl~GE~~v~~~~ 139 (281)
T COG1091 125 GRSKLAGEEAVRAAG 139 (281)
T ss_pred hHHHHHHHHHHHHhC
Confidence 999999999987764
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.8e-12 Score=100.66 Aligned_cols=181 Identities=19% Similarity=0.114 Sum_probs=136.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh----hhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW----QSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+|++||||-+|-=|.-+|+.|++.||.|..+.|..+..+...-++ .....+++...+|++|...+.++++++
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---- 77 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---- 77 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence 689999999999999999999999999999988654432211011 122456889999999999999988876
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecC--Ccc---------CcC
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV--GGL---------SHV 161 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~--~~~---------~~~ 161 (218)
.||-|+|-|+. .+...|.++.+...+++..|+++++.+..-.= .+.-+|...||. .|. -|.
T Consensus 78 --~PdEIYNLaAQ----S~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~TPF 149 (345)
T COG1089 78 --QPDEIYNLAAQ----SHVGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETTPF 149 (345)
T ss_pred --Cchhheecccc----ccccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCCCC
Confidence 68999999885 45566777888889999999999999874221 223466666652 121 145
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccC---CeEEEEeecccccChhhHHHH
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKD---NIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~---gv~v~~v~PG~v~t~~~~~~~ 209 (218)
.+.+||+++|.....++..++..|+-+ ||-+|.=+|.-=.|=.++++.
T Consensus 150 yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt 200 (345)
T COG1089 150 YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKIT 200 (345)
T ss_pred CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHH
Confidence 577999999999999999999887543 788888888765555555554
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.5e-11 Score=107.59 Aligned_cols=124 Identities=13% Similarity=0.197 Sum_probs=85.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC---eEEEecCChhh---HHHHHHHhh---------h---------CCCeEEE
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVE---LNKCLKEWQ---------S---------KGFVVSG 70 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r~~~~---~~~~~~~~~---------~---------~~~~v~~ 70 (218)
++||+|+||||+|.||+.++++|++.+. +|+++.|.... .+...+++. + ...++..
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~ 196 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP 196 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence 5789999999999999999999998763 67888775332 122211211 1 1357899
Q ss_pred EEeeCCCHH------HHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC
Q 027816 71 SVCDAASPD------QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS 144 (218)
Q Consensus 71 ~~~D~~~~~------~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~ 144 (218)
+..|+++.+ ..+.+. ..+|+|||+|+.... + ++++..+++|+.|+.++++.+... .
T Consensus 197 v~GDl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f----~---~~~~~a~~vNV~GT~nLLelA~~~---~ 258 (605)
T PLN02503 197 VVGNVCESNLGLEPDLADEIA--------KEVDVIINSAANTTF----D---ERYDVAIDINTRGPCHLMSFAKKC---K 258 (605)
T ss_pred EEeeCCCcccCCCHHHHHHHH--------hcCCEEEECcccccc----c---cCHHHHHHHHHHHHHHHHHHHHHc---C
Confidence 999999872 332222 247999999996431 1 346678899999999999987421 1
Q ss_pred CCCeEEEEecCC
Q 027816 145 GVGSIVFISSVG 156 (218)
Q Consensus 145 ~~~~iv~~ss~~ 156 (218)
...++|++||..
T Consensus 259 ~lk~fV~vSTay 270 (605)
T PLN02503 259 KLKLFLQVSTAY 270 (605)
T ss_pred CCCeEEEccCce
Confidence 234688888853
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.36 E-value=3e-11 Score=109.46 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=100.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.++||||||+|.||++++++|.++|++|... ..|++|.+.+.+.+... ++
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------------~~~l~d~~~v~~~i~~~------~p 429 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------------KGRLEDRSSLLADIRNV------KP 429 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEEee------------------------ccccccHHHHHHHHHhh------CC
Confidence 4689999999999999999999999887311 13577777776666543 58
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCC--cc---------Cc-----
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG--GL---------SH----- 160 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~--~~---------~~----- 160 (218)
|+|||+|+...... .+...++..+.+++|+.++.++++++. +.+. +++++||.. +. .+
T Consensus 430 d~Vih~Aa~~~~~~-~~~~~~~~~~~~~~N~~gt~~l~~a~~----~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~ 503 (668)
T PLN02260 430 THVFNAAGVTGRPN-VDWCESHKVETIRANVVGTLTLADVCR----ENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEED 503 (668)
T ss_pred CEEEECCcccCCCC-CChHHhCHHHHHHHHhHHHHHHHHHHH----HcCC-eEEEEcccceecCCcccccccCCCCCcCC
Confidence 99999999743211 223345567889999999999999984 4443 455555422 11 01
Q ss_pred --CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeec
Q 027816 161 --VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197 (218)
Q Consensus 161 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~P 197 (218)
.+...+|+.+|.+.+.+++.+.. ...+|+..+..
T Consensus 504 ~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~ 539 (668)
T PLN02260 504 KPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPIS 539 (668)
T ss_pred CCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEecc
Confidence 12236899999999999987743 25678777763
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.5e-11 Score=96.77 Aligned_cols=155 Identities=16% Similarity=0.119 Sum_probs=92.4
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v 99 (218)
||||||+|.||++++++|+++|++|++++|+.+...... . .. ..|... ... .+.+ ..+|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~----~~--~~~~~~-~~~-------~~~~-~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W----EG--YKPWAP-LAE-------SEAL-EGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c----ee--eecccc-cch-------hhhc-CCCCEE
Confidence 689999999999999999999999999999876533211 0 00 112211 111 1222 368999
Q ss_pred EecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC--CeEEEEecCCccC-----cC-----C-CCch
Q 027816 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGLS-----HV-----G-SGSI 166 (218)
Q Consensus 100 v~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~--~~iv~~ss~~~~~-----~~-----~-~~~~ 166 (218)
||+||..... .....+.....+++|+.++.++++++ ++.+. ..++..|+...+. +. + ....
T Consensus 62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~ 135 (292)
T TIGR01777 62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF 135 (292)
T ss_pred EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence 9999964321 12344556678899999999988887 33332 2344444432111 00 1 1112
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
|+..+...+...+ .+...++++..+.|+.+-.|
T Consensus 136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~ 168 (292)
T TIGR01777 136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGP 168 (292)
T ss_pred HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECC
Confidence 2333333333322 22335799999999988655
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.7e-10 Score=112.29 Aligned_cols=168 Identities=19% Similarity=0.228 Sum_probs=112.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCC----CeEEEecCChhhHH---HHHHHhhh-------CCCeEEEEEeeCCCHHH--
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLG----AVVHTCSRNEVELN---KCLKEWQS-------KGFVVSGSVCDAASPDQ-- 80 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G----~~V~~~~r~~~~~~---~~~~~~~~-------~~~~v~~~~~D~~~~~~-- 80 (218)
.++|+||||+|+||.+++++|++++ .+|+...|+..... ...+.... ...++.++..|+++..-
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999987 68888888754322 22111111 01358888999975421
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~ 160 (218)
-.+.++++. ..+|.|||+|+... ...+. ....+.|+.|+.++++.+. +.+..+++++||.+.+..
T Consensus 1051 ~~~~~~~l~----~~~d~iiH~Aa~~~----~~~~~---~~~~~~nv~gt~~ll~~a~----~~~~~~~v~vSS~~v~~~ 1115 (1389)
T TIGR03443 1051 SDEKWSDLT----NEVDVIIHNGALVH----WVYPY---SKLRDANVIGTINVLNLCA----EGKAKQFSFVSSTSALDT 1115 (1389)
T ss_pred CHHHHHHHH----hcCCEEEECCcEec----CccCH---HHHHHhHHHHHHHHHHHHH----hCCCceEEEEeCeeecCc
Confidence 011122322 25799999998642 11222 3344579999999999873 344458999999644310
Q ss_pred -----------------C-----------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 161 -----------------V-----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 161 -----------------~-----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
. .....|+.||.+.+.+++.++. .|+++..+.||.|-.+
T Consensus 1116 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443 1116 EYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred ccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccC
Confidence 0 0124599999999999876533 4899999999988554
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.1e-11 Score=97.83 Aligned_cols=95 Identities=13% Similarity=0.147 Sum_probs=75.2
Q ss_pred cEEEEecC-CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGG-TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa-~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.+=.||.. +||||+++|++|+++|++|+++++... . ... ....+|+++.++++++++.+.+.+ +++
T Consensus 15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------~~~----~~~~~Dv~d~~s~~~l~~~v~~~~-g~i 81 (227)
T TIGR02114 15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L-------KPE----PHPNLSIREIETTKDLLITLKELV-QEH 81 (227)
T ss_pred CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c-------ccc----cCCcceeecHHHHHHHHHHHHHHc-CCC
Confidence 34466666 678999999999999999999876321 1 000 013589999999999999999988 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHh
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTT 125 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~ 125 (218)
|++|||||.....++.+.+.++|++.+..
T Consensus 82 DiLVnnAgv~d~~~~~~~s~e~~~~~~~~ 110 (227)
T TIGR02114 82 DILIHSMAVSDYTPVYMTDLEQVQASDNL 110 (227)
T ss_pred CEEEECCEeccccchhhCCHHHHhhhcch
Confidence 99999999877778888999999977554
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-10 Score=106.61 Aligned_cols=176 Identities=16% Similarity=0.228 Sum_probs=145.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhH---HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVEL---NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.|..+|+||-||.|.++|.+|.++|+ .+++++|+--+- ...+..+...+.+|.....|++..+...+++++..+.
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl- 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL- 1846 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc-
Confidence 47899999999999999999999999 588888874432 3456777888999999999999999999999988654
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++-.++|-|.+.-.+.+++.++++|.+.-+..+.|++++=+..+.+-.+ -.-||.+||+....+..+...|+.+++
T Consensus 1847 -~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~--LdyFv~FSSvscGRGN~GQtNYG~aNS 1923 (2376)
T KOG1202|consen 1847 -GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE--LDYFVVFSSVSCGRGNAGQTNYGLANS 1923 (2376)
T ss_pred -ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc--cceEEEEEeecccCCCCcccccchhhH
Confidence 68899999999888888999999999999999999999987766432221 247899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccc
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v 200 (218)
+++.+++.-+.+ |..=.+|..|-|
T Consensus 1924 ~MERiceqRr~~----GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1924 AMERICEQRRHE----GFPGTAIQWGAI 1947 (2376)
T ss_pred HHHHHHHHhhhc----CCCcceeeeecc
Confidence 999999875544 444455555544
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.3e-10 Score=91.60 Aligned_cols=142 Identities=11% Similarity=0.057 Sum_probs=93.1
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+|+||||+|.+|++++++|+++|++|.++.|+.++... ..+..+.+|..|.+++.++++.... ..+.+|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~~~-~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSDDG-MEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcccC-cCCceeE
Confidence 37999999999999999999999999999998865321 1344567899999999988865322 2123899
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHHH
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 178 (218)
++++++... + .. ....+++.+ .++.+..+||++||.....+. ..+..++.+.
T Consensus 71 v~~~~~~~~-----~----~~--------~~~~~~i~a----a~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~l 122 (285)
T TIGR03649 71 VYLVAPPIP-----D----LA--------PPMIKFIDF----ARSKGVRRFVLLSASIIEKGG-------PAMGQVHAHL 122 (285)
T ss_pred EEEeCCCCC-----C----hh--------HHHHHHHHH----HHHcCCCEEEEeeccccCCCC-------chHHHHHHHH
Confidence 999876311 1 00 011123333 356666799999986543321 1232223222
Q ss_pred HHHHHHhccCCeEEEEeecccccChh
Q 027816 179 RNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 179 ~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+ + ..|++...++|+++..++
T Consensus 123 ~----~--~~gi~~tilRp~~f~~~~ 142 (285)
T TIGR03649 123 D----S--LGGVEYTVLRPTWFMENF 142 (285)
T ss_pred H----h--ccCCCEEEEeccHHhhhh
Confidence 1 1 148999999999776544
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.8e-10 Score=85.06 Aligned_cols=85 Identities=26% Similarity=0.251 Sum_probs=70.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++++||||+ |+|.+++++|+++|++|++.+|+.+..+.....+.. ...+..+.+|++|.+++.++++.+.+.+ +++|
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id 77 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFD 77 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCe
Confidence 468999998 677779999999999999999988776665544432 3467888999999999999999999887 6899
Q ss_pred EEEecCCC
Q 027816 98 ILVNNVGT 105 (218)
Q Consensus 98 ~vv~~ag~ 105 (218)
.+|+..-.
T Consensus 78 ~lv~~vh~ 85 (177)
T PRK08309 78 LAVAWIHS 85 (177)
T ss_pred EEEEeccc
Confidence 99977553
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.2e-10 Score=87.89 Aligned_cols=159 Identities=18% Similarity=0.188 Sum_probs=109.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+..++++|+||||+|+||++|+.+|..+|.+|++++.-........+.+ .....+..+..|+..+ ++.
T Consensus 23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~-~~~~~fel~~hdv~~p-----l~~------ 90 (350)
T KOG1429|consen 23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW-IGHPNFELIRHDVVEP-----LLK------ 90 (350)
T ss_pred cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh-ccCcceeEEEeechhH-----HHH------
Confidence 4456799999999999999999999999999999987555444443333 2234566677776544 333
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-------------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------- 159 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------- 159 (218)
.+|-++|.|+...+.... ....+.+.+|+.++++++..+ ++-+ .+++..|+..-+.
T Consensus 91 --evD~IyhLAapasp~~y~----~npvktIktN~igtln~lgla----krv~-aR~l~aSTseVYgdp~~hpq~e~ywg 159 (350)
T KOG1429|consen 91 --EVDQIYHLAAPASPPHYK----YNPVKTIKTNVIGTLNMLGLA----KRVG-ARFLLASTSEVYGDPLVHPQVETYWG 159 (350)
T ss_pred --HhhhhhhhccCCCCcccc----cCccceeeecchhhHHHHHHH----HHhC-ceEEEeecccccCCcccCCCcccccc
Confidence 347788888765443222 123466789999999999877 3333 4666666532111
Q ss_pred ---cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeec
Q 027816 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197 (218)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~P 197 (218)
+....+-|.-.|...+.++..+.++ .||.|....+
T Consensus 160 ~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRi 197 (350)
T KOG1429|consen 160 NVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARI 197 (350)
T ss_pred ccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEee
Confidence 1234467999999999999988887 5776665554
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.2e-09 Score=92.68 Aligned_cols=145 Identities=19% Similarity=0.218 Sum_probs=93.5
Q ss_pred CCcEEEEe----cCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH-------HHHhhhCCCeEEEEEeeCCCHHHHHHH
Q 027816 16 KGMTALVT----GGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC-------LKEWQSKGFVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 16 ~~k~vlIt----Ga~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~~~~~~v~~~~~D~~~~~~~~~~ 84 (218)
..++|||| ||+|.||++++++|+++|++|++++|+.+..... ..++.. ..+..+.+|+.+ +.++
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKSK 125 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHhh
Confidence 34789999 9999999999999999999999999987542211 111211 136677888755 3333
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC-
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS- 163 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~- 163 (218)
+. . ..+|+|||+++. . ..++..+++++ ++.+..++|++||...+.....
T Consensus 126 ~~----~--~~~d~Vi~~~~~---------~-----------~~~~~~ll~aa----~~~gvkr~V~~SS~~vyg~~~~~ 175 (378)
T PLN00016 126 VA----G--AGFDVVYDNNGK---------D-----------LDEVEPVADWA----KSPGLKQFLFCSSAGVYKKSDEP 175 (378)
T ss_pred hc----c--CCccEEEeCCCC---------C-----------HHHHHHHHHHH----HHcCCCEEEEEccHhhcCCCCCC
Confidence 32 1 357999998762 1 11233444544 5556678999999754321110
Q ss_pred -------CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 164 -------GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 164 -------~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..++. +|...+.+.+ + .++++..+.|+.+..|
T Consensus 176 p~~E~~~~~p~~-sK~~~E~~l~----~---~~l~~~ilRp~~vyG~ 214 (378)
T PLN00016 176 PHVEGDAVKPKA-GHLEVEAYLQ----K---LGVNWTSFRPQYIYGP 214 (378)
T ss_pred CCCCCCcCCCcc-hHHHHHHHHH----H---cCCCeEEEeceeEECC
Confidence 11222 7887776643 2 4799999999888654
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.2e-09 Score=95.45 Aligned_cols=134 Identities=14% Similarity=0.182 Sum_probs=90.2
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+||||||+|.||++++++|+++|++|++++|..... ....+..+.+|+++.. +.+++ ..+|+
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al--------~~~D~ 63 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELA--------GEADA 63 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHh--------cCCCE
Confidence 699999999999999999999999999999865321 1124677889999873 33322 24799
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHHH
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 178 (218)
|||+|+.... . ..++|+.++.++++++ ++.+. ++|++||..+. + ..|. ..+.+.
T Consensus 64 VIHLAa~~~~------~------~~~vNv~Gt~nLleAA----~~~Gv-RiV~~SS~~G~---~--~~~~----~aE~ll 117 (699)
T PRK12320 64 VIHLAPVDTS------A------PGGVGITGLAHVANAA----ARAGA-RLLFVSQAAGR---P--ELYR----QAETLV 117 (699)
T ss_pred EEEcCccCcc------c------hhhHHHHHHHHHHHHH----HHcCC-eEEEEECCCCC---C--cccc----HHHHHH
Confidence 9999985211 0 1247999999999887 44443 79999876421 1 1232 123322
Q ss_pred HHHHHHhccCCeEEEEeecccccCh
Q 027816 179 RNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 179 ~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.+ .++++..+.|+.+-.|
T Consensus 118 ----~~---~~~p~~ILR~~nVYGp 135 (699)
T PRK12320 118 ----ST---GWAPSLVIRIAPPVGR 135 (699)
T ss_pred ----Hh---cCCCEEEEeCceecCC
Confidence 22 3466777777666554
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.4e-10 Score=87.44 Aligned_cols=170 Identities=18% Similarity=0.150 Sum_probs=116.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhC--CCeEEEecCC---hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAGL--GAVVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
|.++||||.|.||+..+..++.. .++.+..+.- .. ++. .++. .......++..|+.+...+..++.+
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~-l~~~-~n~p~ykfv~~di~~~~~~~~~~~~----- 78 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKN-LEPV-RNSPNYKFVEGDIADADLVLYLFET----- 78 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cch-hhhh-ccCCCceEeeccccchHHHHhhhcc-----
Confidence 79999999999999999999875 3454444321 11 111 1111 2345678889999988887766653
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc------------Cc
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL------------SH 160 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~------------~~ 160 (218)
.++|.|+|.|+... .+.+.-+..+....|++++..+++..+... +..++|.+|+-.-+ ..
T Consensus 79 -~~id~vihfaa~t~----vd~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~ 150 (331)
T KOG0747|consen 79 -EEIDTVIHFAAQTH----VDRSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASL 150 (331)
T ss_pred -CchhhhhhhHhhhh----hhhhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCcccccccccccc
Confidence 47999999998642 233333445667899999999999874332 44689999983211 12
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEee------cccccChhhH
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA------PWYTKTSLVE 206 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~------PG~v~t~~~~ 206 (218)
..+..+|+++|+|.+++.+++.+.| |+.+..+. |+.....+.-
T Consensus 151 ~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~klip 199 (331)
T KOG0747|consen 151 LNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPEKLIP 199 (331)
T ss_pred CCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChHHHhH
Confidence 3456899999999999999999995 56665555 5544444443
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.9e-09 Score=84.30 Aligned_cols=157 Identities=18% Similarity=0.176 Sum_probs=92.4
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v 99 (218)
|+||||+|.||++++.+|.+.|.+|.++.|+.++.+.... ..+ ...+.+....+ ..+|+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------~~v-------~~~~~~~~~~~-------~~~Dav 60 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------PNV-------TLWEGLADALT-------LGIDAV 60 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------ccc-------cccchhhhccc-------CCCCEE
Confidence 5899999999999999999999999999998876543210 001 11122211111 258999
Q ss_pred EecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCCCchhhhhHHHHH---
Q 027816 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATKAAMN--- 175 (218)
Q Consensus 100 v~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~--- 175 (218)
||-||...... .++.+.=++.++.-+..+ +.+.....+. .+.++.+-+|..++++......|.-.....+
T Consensus 61 INLAG~~I~~r--rWt~~~K~~i~~SRi~~T----~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl 134 (297)
T COG1090 61 INLAGEPIAER--RWTEKQKEEIRQSRINTT----EKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL 134 (297)
T ss_pred EECCCCccccc--cCCHHHHHHHHHHHhHHH----HHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence 99999743222 134433344444444444 4444444432 3345555555666666554444443333333
Q ss_pred -HHHHHHHHHh---ccCCeEEEEeecccccC
Q 027816 176 -QLTRNLACEW---AKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 176 -~~~~~l~~e~---~~~gv~v~~v~PG~v~t 202 (218)
.+++.|-.+. ...|+||+.+.-|.|..
T Consensus 135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs 165 (297)
T COG1090 135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLS 165 (297)
T ss_pred HHHHHHHHHHHhhhhhcCceEEEEEEEEEec
Confidence 3333333332 34489999999998866
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.87 E-value=9.7e-08 Score=75.49 Aligned_cols=148 Identities=20% Similarity=0.203 Sum_probs=92.1
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v 99 (218)
|+|+||+|.+|+.+++.|++.+++|.++.|+..+ ...+.+...+ ++.+..|..|.+++.++++ .+|.|
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g--~~vv~~d~~~~~~l~~al~--------g~d~v 68 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG--AEVVEADYDDPESLVAALK--------GVDAV 68 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT--TEEEES-TT-HHHHHHHHT--------TCSEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc--ceEeecccCCHHHHHHHHc--------CCceE
Confidence 6899999999999999999999999999998743 2233344444 3456899999999877776 46899
Q ss_pred EecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC---CCCchhhhhHHHHHH
Q 027816 100 VNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---GSGSIYGATKAAMNQ 176 (218)
Q Consensus 100 v~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---~~~~~Y~~sK~a~~~ 176 (218)
+++.+... +. -.....++++++ ++.+..+||..+........ .+..++-..|..++.
T Consensus 69 ~~~~~~~~-----~~-----------~~~~~~~li~Aa----~~agVk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~ 128 (233)
T PF05368_consen 69 FSVTPPSH-----PS-----------ELEQQKNLIDAA----KAAGVKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEE 128 (233)
T ss_dssp EEESSCSC-----CC-----------HHHHHHHHHHHH----HHHT-SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred EeecCcch-----hh-----------hhhhhhhHHHhh----hccccceEEEEEecccccccccccccchhhhhhhhhhh
Confidence 98877432 11 122334455555 44455677754433333111 112223346666665
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+.+. .+++.+.|.||+.......
T Consensus 129 ~l~~-------~~i~~t~i~~g~f~e~~~~ 151 (233)
T PF05368_consen 129 YLRE-------SGIPYTIIRPGFFMENLLP 151 (233)
T ss_dssp HHHH-------CTSEBEEEEE-EEHHHHHT
T ss_pred hhhh-------ccccceeccccchhhhhhh
Confidence 5433 3899999999987655544
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.3e-08 Score=85.01 Aligned_cols=128 Identities=19% Similarity=0.230 Sum_probs=88.1
Q ss_pred EecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEEEe
Q 027816 22 VTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVN 101 (218)
Q Consensus 22 ItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~vv~ 101 (218)
|+||+||+|.+++..+.+.|++|+.+.+....... ... .+++.+++
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~------~~~----------------------------~~~~~~~~ 88 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA------GWG----------------------------DRFGALVF 88 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCcccccccc------CcC----------------------------CcccEEEE
Confidence 78888999999999999999999988765541100 000 23444443
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHHHHHH
Q 027816 102 NVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181 (218)
Q Consensus 102 ~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l 181 (218)
.+.. +. +.+++ .+.+.+++..++.|.. .++||+++|..... ....|+++|+++.++++++
T Consensus 89 d~~~-----~~--~~~~l--------~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~akaal~gl~rsl 148 (450)
T PRK08261 89 DATG-----IT--DPADL--------KALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSL 148 (450)
T ss_pred ECCC-----CC--CHHHH--------HHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHHHHHHHHHHH
Confidence 2221 11 12222 2334566667776643 47999999876653 3457999999999999999
Q ss_pred HHHhccCCeEEEEeecccccChh
Q 027816 182 ACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 182 ~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
++|+ +.+++++.|.|++.+.+.
T Consensus 149 a~E~-~~gi~v~~i~~~~~~~~~ 170 (450)
T PRK08261 149 GKEL-RRGATAQLVYVAPGAEAG 170 (450)
T ss_pred HHHh-hcCCEEEEEecCCCCHHH
Confidence 9999 779999999998754433
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.2e-08 Score=80.93 Aligned_cols=84 Identities=19% Similarity=0.148 Sum_probs=64.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCCh---hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
++++|+++|+|| ||+|++++..|++.|++ |.+++|+. ++.++..+++......+....+|+++.+++++.++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--- 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--- 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence 567899999999 69999999999999985 99999987 56666666665444445556788877766654433
Q ss_pred hhcCCcccEEEecCCCC
Q 027816 90 SKFNGKLNILVNNVGTN 106 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~ 106 (218)
..|+||||....
T Consensus 199 -----~~DilINaTp~G 210 (289)
T PRK12548 199 -----SSDILVNATLVG 210 (289)
T ss_pred -----cCCEEEEeCCCC
Confidence 359999997654
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=2.6e-08 Score=84.65 Aligned_cols=81 Identities=20% Similarity=0.183 Sum_probs=61.7
Q ss_pred ccCCcEEEEecC----------------CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC
Q 027816 14 SLKGMTALVTGG----------------TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77 (218)
Q Consensus 14 ~~~~k~vlItGa----------------~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 77 (218)
+++||++||||| +|.+|.++|++|+++|++|++++++.+ .. . .. ....+|+++
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~-~~----~~~~~dv~~ 253 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T-PA----GVKRIDVES 253 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C-CC----CcEEEccCC
Confidence 578999999999 455999999999999999999988763 11 0 01 124579988
Q ss_pred HHHHHHHHHHHHhhcCCcccEEEecCCCCCCC
Q 027816 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRK 109 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~ 109 (218)
.++..+.+. +.+ +.+|++|+|||+....
T Consensus 254 ~~~~~~~v~---~~~-~~~DilI~~Aav~d~~ 281 (399)
T PRK05579 254 AQEMLDAVL---AAL-PQADIFIMAAAVADYR 281 (399)
T ss_pred HHHHHHHHH---Hhc-CCCCEEEEcccccccc
Confidence 888666655 445 5799999999986443
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=4.3e-08 Score=83.82 Aligned_cols=177 Identities=19% Similarity=0.165 Sum_probs=114.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC---eEEEecCChh--hHHHH---------HHHhh----hCCCeEEEEEeeCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEV--ELNKC---------LKEWQ----SKGFVVSGSVCDAA 76 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r~~~--~~~~~---------~~~~~----~~~~~v~~~~~D~~ 76 (218)
++||+++||||+|++|+-++.+|++.-- ++.+.-|... ..++. -+.+. +...++..+..|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 5799999999999999999999998642 5666655321 11111 11111 23468888899988
Q ss_pred CHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCC
Q 027816 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG 156 (218)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~ 156 (218)
+.+---+--+.. ... ..+|+|+|+|+.. .+. |.++..+.+|++|+.++++.+....+ ...+|.+|...
T Consensus 90 ~~~LGis~~D~~-~l~-~eV~ivih~AAtv---rFd----e~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVSTAy 157 (467)
T KOG1221|consen 90 EPDLGISESDLR-TLA-DEVNIVIHSAATV---RFD----EPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVSTAY 157 (467)
T ss_pred CcccCCChHHHH-HHH-hcCCEEEEeeeee---ccc----hhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeehhh
Confidence 754311111111 111 3679999999953 222 34667788999999999998754432 23678887755
Q ss_pred ccCc----------C------------------------------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEee
Q 027816 157 GLSH----------V------------------------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196 (218)
Q Consensus 157 ~~~~----------~------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~ 196 (218)
.... . .....|.-+|+-.+++...- ..++.+..++
T Consensus 158 ~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~-----~~~lPivIiR 232 (467)
T KOG1221|consen 158 SNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE-----AENLPLVIIR 232 (467)
T ss_pred eecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh-----ccCCCeEEEc
Confidence 4311 0 12356888888888876544 3468999999
Q ss_pred cccccChhhHHH
Q 027816 197 PWYTKTSLVERV 208 (218)
Q Consensus 197 PG~v~t~~~~~~ 208 (218)
|++|-+...+++
T Consensus 233 PsiI~st~~EP~ 244 (467)
T KOG1221|consen 233 PSIITSTYKEPF 244 (467)
T ss_pred CCceeccccCCC
Confidence 998877666554
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.76 E-value=1e-07 Score=73.41 Aligned_cols=84 Identities=24% Similarity=0.243 Sum_probs=65.3
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++++++++|+||+|++|+.+++.|+++|++|++++|+.++.+...+.+.+.. ......+|..+.+++.+.++
T Consensus 24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------ 96 (194)
T cd01078 24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------ 96 (194)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh------
Confidence 36788999999999999999999999999999999999988877766664221 23344678888888766554
Q ss_pred CCcccEEEecCCC
Q 027816 93 NGKLNILVNNVGT 105 (218)
Q Consensus 93 ~~~id~vv~~ag~ 105 (218)
..|+||++.+.
T Consensus 97 --~~diVi~at~~ 107 (194)
T cd01078 97 --GADVVFAAGAA 107 (194)
T ss_pred --cCCEEEECCCC
Confidence 34888887654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.2e-07 Score=76.64 Aligned_cols=173 Identities=18% Similarity=0.175 Sum_probs=102.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+.+.++|+|+||+|.+|+-+++.|.++|+.|.++.|+.++...... +.........+..|.....+...-..+...
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~--- 151 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEAVP--- 151 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhhcc---
Confidence 4456799999999999999999999999999999999988766554 111111122233444444443222222211
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
-...+++.++|.-+... + ..--..+.+.|+.++.+++ ...+..++|.++++.+.-.......+.. .+
T Consensus 152 ~~~~~v~~~~ggrp~~e--d-----~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~--~~ 218 (411)
T KOG1203|consen 152 KGVVIVIKGAGGRPEEE--D-----IVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL--NG 218 (411)
T ss_pred ccceeEEecccCCCCcc--c-----CCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh--hh
Confidence 12355666665432221 1 1111235568888888887 5566679999998766554333333331 11
Q ss_pred HHHHH-HHHHHHhccCCeEEEEeecccccCh
Q 027816 174 MNQLT-RNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 174 ~~~~~-~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.-.-. +...+++...|+.-..|.||....+
T Consensus 219 ~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~ 249 (411)
T KOG1203|consen 219 LVLKAKLKAEKFLQDSGLPYTIIRPGGLEQD 249 (411)
T ss_pred hhhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence 11111 2334445567999999999977553
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.68 E-value=1.2e-07 Score=74.94 Aligned_cols=100 Identities=15% Similarity=0.109 Sum_probs=66.6
Q ss_pred cEEEEecCCCc-hHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~g-iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.+-.||+.|+| ||+++|++|+++|++|++++|+..... .....+..+.++ +.+++.+.+.+.+ +.+
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~~~~~v~~i~v~-----s~~~m~~~l~~~~-~~~ 82 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------EPHPNLSIIEIE-----NVDDLLETLEPLV-KDH 82 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-------CCCCCeEEEEEe-----cHHHHHHHHHHHh-cCC
Confidence 35577876665 999999999999999999887642110 011234444432 2223333343444 468
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~ 130 (218)
|+|||+||.....+....+.++|.+.+++|.+..
T Consensus 83 DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 83 DVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred CEEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence 9999999987655666678888999888876654
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.9e-07 Score=72.13 Aligned_cols=142 Identities=25% Similarity=0.268 Sum_probs=102.7
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
...+++|-++-|.||+|++|+-++.+|++.|-.|++--|..+..-...+- .....++.+...|+.|.++++++++..
T Consensus 55 GRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkv-mGdLGQvl~~~fd~~DedSIr~vvk~s-- 131 (391)
T KOG2865|consen 55 GRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKV-MGDLGQVLFMKFDLRDEDSIRAVVKHS-- 131 (391)
T ss_pred CcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheee-cccccceeeeccCCCCHHHHHHHHHhC--
Confidence 35678899999999999999999999999999999988876543322222 244567889999999999999988743
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++|||..|.-.... +.+.+ ++|+.+.-.+++.| ++.+..++|.+|+..+.. ...+-|--+
T Consensus 132 ------NVVINLIGrd~eTk--nf~f~------Dvn~~~aerlAric----ke~GVerfIhvS~Lganv--~s~Sr~Lrs 191 (391)
T KOG2865|consen 132 ------NVVINLIGRDYETK--NFSFE------DVNVHIAERLARIC----KEAGVERFIHVSCLGANV--KSPSRMLRS 191 (391)
T ss_pred ------cEEEEeeccccccC--Ccccc------cccchHHHHHHHHH----HhhChhheeehhhccccc--cChHHHHHh
Confidence 78999888532221 22222 47888888888887 777778999999876442 222334444
Q ss_pred HHHHH
Q 027816 171 KAAMN 175 (218)
Q Consensus 171 K~a~~ 175 (218)
|++.+
T Consensus 192 K~~gE 196 (391)
T KOG2865|consen 192 KAAGE 196 (391)
T ss_pred hhhhH
Confidence 44433
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.1e-06 Score=69.05 Aligned_cols=132 Identities=23% Similarity=0.153 Sum_probs=91.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
+.++||||+|.+|++++++|.++|++|.+..|+.+...... ..+.....|+.+.+.+...++ ..|
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~--------G~~ 65 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK--------GVD 65 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc--------ccc
Confidence 46899999999999999999999999999999998876543 457888999999999877776 346
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
.+++..+... +... .............+... .+..+++.+|...+.. .....|..+|...+..
T Consensus 66 ~~~~i~~~~~-~~~~---------~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~ 128 (275)
T COG0702 66 GVLLISGLLD-GSDA---------FRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA 128 (275)
T ss_pred EEEEEecccc-cccc---------hhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence 6666665432 1110 11222344444444331 2234677777665443 3457899999888887
Q ss_pred HHHH
Q 027816 178 TRNL 181 (218)
Q Consensus 178 ~~~l 181 (218)
.+..
T Consensus 129 l~~s 132 (275)
T COG0702 129 LRSS 132 (275)
T ss_pred HHhc
Confidence 6554
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.58 E-value=3e-07 Score=77.95 Aligned_cols=110 Identities=17% Similarity=0.213 Sum_probs=75.3
Q ss_pred ccCCcEEEEecC---------------CCc-hHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC
Q 027816 14 SLKGMTALVTGG---------------TRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77 (218)
Q Consensus 14 ~~~~k~vlItGa---------------~~g-iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 77 (218)
+++||+++|||| ||| +|.++|++|..+|++|+++.++.+.. . . . ....+|+++
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~-~--~--~~~~~~v~~ 250 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T-P--P--GVKSIKVST 250 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C-C--C--CcEEEEecc
Confidence 478999999999 666 99999999999999999987665321 0 1 1 124578888
Q ss_pred HHHH-HHHHHHHHhhcCCcccEEEecCCCCCCCCCCCC--CHHHHHHHHHhhhhhHHHHHHHHh
Q 027816 78 PDQR-EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY--SAEEYSKIMTTNFESTYHLCQLVY 138 (218)
Q Consensus 78 ~~~~-~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~--~~~~~~~~~~~nv~~~~~~~~~~~ 138 (218)
.++. ++++++. . +.+|++|+|||+....+.... ..+.-.+.+.+|+..+-.+++.+.
T Consensus 251 ~~~~~~~~~~~~---~-~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 251 AEEMLEAALNEL---A-KDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred HHHHHHHHHHhh---c-ccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHH
Confidence 8887 5455343 3 578999999998765443211 111112345677777777777664
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.8e-06 Score=62.98 Aligned_cols=151 Identities=17% Similarity=0.161 Sum_probs=104.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++|-|.||+|-.|+.|+++..++|.+|..+.|+.++.... ..+...+.|+.|+.++.+.+. .-|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~--------g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA--------GHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc--------CCc
Confidence 3577899999999999999999999999999999886532 236677899999888755444 359
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc--------CC-CCchhh
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--------VG-SGSIYG 168 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--------~~-~~~~Y~ 168 (218)
+||..-|...+.. +. .+ ... .+++...++..+..|+++++...+..- +| ....|-
T Consensus 65 aVIsA~~~~~~~~------~~--~~----~k~----~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~ 128 (211)
T COG2910 65 AVISAFGAGASDN------DE--LH----SKS----IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK 128 (211)
T ss_pred eEEEeccCCCCCh------hH--HH----HHH----HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence 9998877532211 11 11 111 355555556666678888887665442 22 224465
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..-.+..-+.+.|+.+ ..++-+-|+|..+..|
T Consensus 129 ~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~P 160 (211)
T COG2910 129 PEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEP 160 (211)
T ss_pred HHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCC
Confidence 5555566666788888 4588899999877766
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.7e-05 Score=69.41 Aligned_cols=170 Identities=18% Similarity=0.156 Sum_probs=109.7
Q ss_pred CccCCcEEEEecCC-CchHHHHHHHHHhCCCeEEEecCC-hhhHHHHHHHh----hhCCCeEEEEEeeCCCHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEW----QSKGFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 13 ~~~~~k~vlItGa~-~giG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~~----~~~~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
....+|++|||||+ +.||.+++..|++.|+.|+++..+ .++..++++.+ ...+..+..+..++.+..+++.+++
T Consensus 392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe 471 (866)
T COG4982 392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE 471 (866)
T ss_pred CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence 45678999999999 889999999999999998887543 33444444443 2346678888999999999999988
Q ss_pred HHHhhc-------------CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEE
Q 027816 87 EVGSKF-------------NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIV 150 (218)
Q Consensus 87 ~~~~~~-------------~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv 150 (218)
=+.++. +-.+|.+|=-|+....+.+.+..... +-.+.+-+.+...++-.+.+.-.+.+ +-++|
T Consensus 472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVV 550 (866)
T COG4982 472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVV 550 (866)
T ss_pred HhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccceEEE
Confidence 665432 12367888777776666666554322 22334444444444433322211111 12344
Q ss_pred EEecCCccCcCCCCchhhhhHHHHHHHHHHHHHH
Q 027816 151 FISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184 (218)
Q Consensus 151 ~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e 184 (218)
.=.|-. +..+.+.+.|+-+|.+++.+.--|-.|
T Consensus 551 LPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sE 583 (866)
T COG4982 551 LPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSE 583 (866)
T ss_pred ecCCCC-CCccCCCcchhhHHHHHHHHHHHhhcc
Confidence 444422 222446689999999999998776666
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.7e-06 Score=66.95 Aligned_cols=144 Identities=19% Similarity=0.143 Sum_probs=91.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC---eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
|+|+|||++|-.|++|.+.+.++|. +.++.+.. .+|+++.++.+++|++.
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e------ 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE------ 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc------
Confidence 6899999999999999999999885 34433321 27999999999999975
Q ss_pred cccEEEecCCCCCCCCCC--CCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-------------
Q 027816 95 KLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------- 159 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~--~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------- 159 (218)
++-.|||.|+.... .+. ..+.+-|+..+++| -++++.+ .+.+..++|++.|..-+.
T Consensus 55 kPthVIhlAAmVGG-lf~N~~ynldF~r~Nl~in----dNVlhsa----~e~gv~K~vsclStCIfPdkt~yPIdEtmvh 125 (315)
T KOG1431|consen 55 KPTHVIHLAAMVGG-LFHNNTYNLDFIRKNLQIN----DNVLHSA----HEHGVKKVVSCLSTCIFPDKTSYPIDETMVH 125 (315)
T ss_pred CCceeeehHhhhcc-hhhcCCCchHHHhhcceec----hhHHHHH----HHhchhhhhhhcceeecCCCCCCCCCHHHhc
Confidence 56677887764332 222 23455555544433 3344444 233444566655532111
Q ss_pred ---cCCCCchhhhhHHHHHHHHHHHHHHhccC---CeEEEEeec
Q 027816 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKD---NIRTNSVAP 197 (218)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~---gv~v~~v~P 197 (218)
+-|..--|+-+|..+.-..+.++.+++.. +|..|..-|
T Consensus 126 ~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGp 169 (315)
T KOG1431|consen 126 NGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGP 169 (315)
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCC
Confidence 11233458999988888889999986532 344444433
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.4e-07 Score=73.10 Aligned_cols=84 Identities=18% Similarity=0.154 Sum_probs=52.2
Q ss_pred cCCcEEEEecCC----------------CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCH
Q 027816 15 LKGMTALVTGGT----------------RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78 (218)
Q Consensus 15 ~~~k~vlItGa~----------------~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 78 (218)
++||+||||+|. |.+|.++|++|+++|++|+++++....... .. .....+..+..|
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~-~~~~~~~~V~s~---- 72 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI-NNQLELHPFEGI---- 72 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc-CCceeEEEEecH----
Confidence 469999999987 999999999999999999888754321110 00 011223333332
Q ss_pred HHHHHHHHHHHhhcCCcccEEEecCCCCCC
Q 027816 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIR 108 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~vv~~ag~~~~ 108 (218)
.+..+.+.++.+. ..+|+|||+|+....
T Consensus 73 ~d~~~~l~~~~~~--~~~D~VIH~AAvsD~ 100 (229)
T PRK09620 73 IDLQDKMKSIITH--EKVDAVIMAAAGSDW 100 (229)
T ss_pred HHHHHHHHHHhcc--cCCCEEEECccccce
Confidence 2222233333322 257999999998643
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.7e-06 Score=72.75 Aligned_cols=76 Identities=25% Similarity=0.304 Sum_probs=64.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+.+||.|| |++|+.+|..|+++| .+|.+.+|+.++..+...... .++...++|+.+.+.+.+++++ .
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~~-------~- 69 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIKD-------F- 69 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHhc-------C-
Confidence 57899999 999999999999999 699999999988877765432 2688999999999998887773 2
Q ss_pred cEEEecCCC
Q 027816 97 NILVNNVGT 105 (218)
Q Consensus 97 d~vv~~ag~ 105 (218)
|+||+++..
T Consensus 70 d~VIn~~p~ 78 (389)
T COG1748 70 DLVINAAPP 78 (389)
T ss_pred CEEEEeCCc
Confidence 889998874
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=6e-07 Score=70.28 Aligned_cols=184 Identities=18% Similarity=0.097 Sum_probs=121.2
Q ss_pred ccCC-cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH-HHHHhh-----hCCCeEEEEEeeCCCHHHHHHHHH
Q 027816 14 SLKG-MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK-CLKEWQ-----SKGFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 14 ~~~~-k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-----~~~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
.++. |++||||-+|-=|+-++..|+..|++|..+-|..+..+. .++++- ..+........|++|...+-+++.
T Consensus 24 ~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~ 103 (376)
T KOG1372|consen 24 AFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS 103 (376)
T ss_pred CcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence 3444 589999999999999999999999999988776655443 233331 224556667899999999988888
Q ss_pred HHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec--CCcc------
Q 027816 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS--VGGL------ 158 (218)
Q Consensus 87 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss--~~~~------ 158 (218)
.+ +++-|+|.|+.... ..+.|-.+..-++...|++.++.+...+-...+ -++--.|+ ..+.
T Consensus 104 ~i------kPtEiYnLaAQSHV----kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~-VrfYQAstSElyGkv~e~PQ 172 (376)
T KOG1372|consen 104 TI------KPTEVYNLAAQSHV----KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEK-VRFYQASTSELYGKVQEIPQ 172 (376)
T ss_pred cc------Cchhhhhhhhhcce----EEEeecccceeeccchhhhhHHHHHHhcCcccc-eeEEecccHhhcccccCCCc
Confidence 76 56778888876432 222222344456677899998887743322222 23333332 2221
Q ss_pred ---CcCCCCchhhhhHHHHHHHHHHHHHHhc---cCCeEEEEeecccccChhhHHH
Q 027816 159 ---SHVGSGSIYGATKAAMNQLTRNLACEWA---KDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 159 ---~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
-|..+.++|+++|.+...++-.++..|. -.||-+|.=+|--=.+=..+++
T Consensus 173 sE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKI 228 (376)
T KOG1372|consen 173 SETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKI 228 (376)
T ss_pred ccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHH
Confidence 1344568999999888877777776654 3478888888854444444443
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.35 E-value=5.4e-06 Score=68.67 Aligned_cols=150 Identities=15% Similarity=0.130 Sum_probs=92.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.++|.|+|++|.+|..++..|+.++. ++++.+.++. +...-++.+..... ...++++.+++.+.+ .
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~--~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l--------~ 85 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT--PGVAADVSHINTPA--QVRGFLGDDQLGDAL--------K 85 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC--CeeEchhhhCCcCc--eEEEEeCCCCHHHHc--------C
Confidence 46899999999999999999997774 7999998772 22122333222211 122332333333322 2
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec-CCc----c--------CcC
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS-VGG----L--------SHV 161 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss-~~~----~--------~~~ 161 (218)
..|+||+.||.... ... .+++.+..|+-....+.+.+ .+..+..+|+++| -.. . .+.
T Consensus 86 ~aDiVVitAG~~~~---~g~---~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~ 155 (323)
T PLN00106 86 GADLVIIPAGVPRK---PGM---TRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVLKKAGVY 155 (323)
T ss_pred CCCEEEEeCCCCCC---CCC---CHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHHHHcCCC
Confidence 46999999997422 122 35666778877776666655 5554455555544 332 1 235
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccC
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKD 188 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~ 188 (218)
|....|+.++.--..|-..++.++.-.
T Consensus 156 p~~~viG~~~LDs~Rl~~~lA~~lgv~ 182 (323)
T PLN00106 156 DPKKLFGVTTLDVVRANTFVAEKKGLD 182 (323)
T ss_pred CcceEEEEecchHHHHHHHHHHHhCCC
Confidence 566788888766667777888886533
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=4.4e-06 Score=69.12 Aligned_cols=155 Identities=17% Similarity=0.123 Sum_probs=90.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++.++|.|+|++|.+|..++..++.++ .+++++++.. ......++.+.... ....+.++..++.+.+
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l------- 74 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTP--AKVTGYADGELWEKAL------- 74 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcC--ceEEEecCCCchHHHh-------
Confidence 345689999999999999999999766 5899999932 22222233322221 1233444433322222
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCC-------------ccC
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG-------------GLS 159 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~-------------~~~ 159 (218)
...|+||+++|.... .. +++.+.++.|+.....+++.+ ++.+..++|+++|-- -..
T Consensus 75 -~gaDvVVitaG~~~~---~~---~tR~dll~~N~~i~~~i~~~i----~~~~~~~iviv~SNPvdv~~~~~~~~~~~~s 143 (321)
T PTZ00325 75 -RGADLVLICAGVPRK---PG---MTRDDLFNTNAPIVRDLVAAV----ASSAPKAIVGIVSNPVNSTVPIAAETLKKAG 143 (321)
T ss_pred -CCCCEEEECCCCCCC---CC---CCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCcHHHHHHHHHhhhhhcc
Confidence 246999999996321 11 235566778877776555554 666666787777721 222
Q ss_pred cCCCCchhhhhHHHHHH--HHHHHHHHhccCCeEEEEee
Q 027816 160 HVGSGSIYGATKAAMNQ--LTRNLACEWAKDNIRTNSVA 196 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~--~~~~l~~e~~~~gv~v~~v~ 196 (218)
+.|....|+.+ .++. |-..+++.+ |+....|.
T Consensus 144 g~p~~~viG~g--~LDs~R~r~~la~~l---~v~~~~V~ 177 (321)
T PTZ00325 144 VYDPRKLFGVT--TLDVVRARKFVAEAL---GMNPYDVN 177 (321)
T ss_pred CCChhheeech--hHHHHHHHHHHHHHh---CcChhheE
Confidence 34556677775 2443 333444443 44444444
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.8e-06 Score=59.60 Aligned_cols=77 Identities=22% Similarity=0.344 Sum_probs=56.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++|.|+ ||.|+++++.|++.|++ |.++.|+.++.+++.+.+.. ..+..... .+.. +..
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~--~~~~~~~~--~~~~---~~~------- 73 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG--VNIEAIPL--EDLE---EAL------- 73 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG--CSEEEEEG--GGHC---HHH-------
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc--cccceeeH--HHHH---HHH-------
Confidence 678999999997 89999999999999985 99999999999888887722 22333333 2222 222
Q ss_pred CCcccEEEecCCCC
Q 027816 93 NGKLNILVNNVGTN 106 (218)
Q Consensus 93 ~~~id~vv~~ag~~ 106 (218)
...|+||++.+..
T Consensus 74 -~~~DivI~aT~~~ 86 (135)
T PF01488_consen 74 -QEADIVINATPSG 86 (135)
T ss_dssp -HTESEEEE-SSTT
T ss_pred -hhCCeEEEecCCC
Confidence 2469999998754
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.25 E-value=3.4e-06 Score=62.89 Aligned_cols=160 Identities=18% Similarity=0.181 Sum_probs=101.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
++.++++.++|.||+|-.|..+.+++++++- +|+++.|.+..... ....+....+|.+..++. +...
T Consensus 13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-------t~k~v~q~~vDf~Kl~~~---a~~~- 81 (238)
T KOG4039|consen 13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-------TDKVVAQVEVDFSKLSQL---ATNE- 81 (238)
T ss_pred HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-------ccceeeeEEechHHHHHH---Hhhh-
Confidence 4678889999999999999999999999984 78888887532221 223455566776555553 3333
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
..+|+.+++-|.--...- .|.+ +.+.---.+.+++.+ ++.+...||.+||..+.... .--|--
T Consensus 82 ----qg~dV~FcaLgTTRgkaG----adgf---ykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rFlY~k 144 (238)
T KOG4039|consen 82 ----QGPDVLFCALGTTRGKAG----ADGF---YKVDHDYVLQLAQAA----KEKGCKTFVLVSSAGADPSS--RFLYMK 144 (238)
T ss_pred ----cCCceEEEeecccccccc----cCce---EeechHHHHHHHHHH----HhCCCeEEEEEeccCCCccc--ceeeee
Confidence 357999999875322110 1111 111112223344444 56666789999997765543 345777
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
.|.-++.=+..|..+ ++..+.||++..+..
T Consensus 145 ~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 145 MKGEVERDVIELDFK------HIIILRPGPLLGERT 174 (238)
T ss_pred ccchhhhhhhhcccc------EEEEecCcceecccc
Confidence 777777665555333 788899999876544
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.23 E-value=4.7e-06 Score=70.94 Aligned_cols=75 Identities=24% Similarity=0.355 Sum_probs=58.2
Q ss_pred EEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 20 ALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+|.|| |.+|+.+++.|++++- +|++.+|+.+++++..+.+ ....+...++|+.|.+++.++++ ..|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~--------~~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR--------GCD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT--------TSS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh--------cCC
Confidence 689999 9999999999999874 8999999999988776654 34568899999999999877766 239
Q ss_pred EEEecCCC
Q 027816 98 ILVNNVGT 105 (218)
Q Consensus 98 ~vv~~ag~ 105 (218)
+||+++|.
T Consensus 70 vVin~~gp 77 (386)
T PF03435_consen 70 VVINCAGP 77 (386)
T ss_dssp EEEE-SSG
T ss_pred EEEECCcc
Confidence 99999985
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=9.4e-06 Score=67.50 Aligned_cols=73 Identities=23% Similarity=0.224 Sum_probs=53.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhC-C-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGL-G-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++|+++||||+|.||+.++++|+++ | .++++++|+.+++....+++.. .|+. ++.+ .
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~~-------~ 212 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLEE-------A 212 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHHH-------H
Confidence 578999999999999999999999864 5 4899999998877666554321 2221 2222 2
Q ss_pred cCCcccEEEecCCCC
Q 027816 92 FNGKLNILVNNVGTN 106 (218)
Q Consensus 92 ~~~~id~vv~~ag~~ 106 (218)
+ ...|+|+++++..
T Consensus 213 l-~~aDiVv~~ts~~ 226 (340)
T PRK14982 213 L-PEADIVVWVASMP 226 (340)
T ss_pred H-ccCCEEEECCcCC
Confidence 2 3579999999864
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.3e-05 Score=69.55 Aligned_cols=77 Identities=26% Similarity=0.309 Sum_probs=56.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++|+|+++ +|.++|+.|+++|++|.+.+++. +..++..+++...+ +..+..|..+. ..
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~~ 66 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------FL 66 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------Hh
Confidence 46789999999888 99999999999999999999975 34444444454333 44566676541 11
Q ss_pred CCcccEEEecCCCC
Q 027816 93 NGKLNILVNNVGTN 106 (218)
Q Consensus 93 ~~~id~vv~~ag~~ 106 (218)
+.+|+||+++|..
T Consensus 67 -~~~d~vv~~~g~~ 79 (450)
T PRK14106 67 -EGVDLVVVSPGVP 79 (450)
T ss_pred -hcCCEEEECCCCC
Confidence 4689999999864
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.8e-06 Score=64.40 Aligned_cols=162 Identities=15% Similarity=0.170 Sum_probs=103.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhC-CC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGL-GA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+.+-.+|||||+-|-+|..+|+.|-.+ |- .|++.+-...... ..+.+. ++..|+.|...+++++-.
T Consensus 41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~~GP---yIy~DILD~K~L~eIVVn---- 108 (366)
T KOG2774|consen 41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTDVGP---YIYLDILDQKSLEEIVVN---- 108 (366)
T ss_pred cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hcccCC---chhhhhhccccHHHhhcc----
Confidence 334568999999999999999988765 54 5776654332211 122333 345788888887776542
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC----------
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---------- 161 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---------- 161 (218)
.+||+++|-.+.... + ...+.--..++|..|..++++.+ ++.+ -++.+=|.+.++.+.
T Consensus 109 --~RIdWL~HfSALLSA--v---GE~NVpLA~~VNI~GvHNil~vA----a~~k-L~iFVPSTIGAFGPtSPRNPTPdlt 176 (366)
T KOG2774|consen 109 --KRIDWLVHFSALLSA--V---GETNVPLALQVNIRGVHNILQVA----AKHK-LKVFVPSTIGAFGPTSPRNPTPDLT 176 (366)
T ss_pred --cccceeeeHHHHHHH--h---cccCCceeeeecchhhhHHHHHH----HHcC-eeEeecccccccCCCCCCCCCCCee
Confidence 589999998654211 0 01111223578999999999987 3333 233333445544432
Q ss_pred --CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEee-cccccC
Q 027816 162 --GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA-PWYTKT 202 (218)
Q Consensus 162 --~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~-PG~v~t 202 (218)
.....|+.||.-.+.+.+.+-.. +|+.+.+.. ||.+..
T Consensus 177 IQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~ 217 (366)
T KOG2774|consen 177 IQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISA 217 (366)
T ss_pred eecCceeechhHHHHHHHHHHHHhh---cCccceecccCccccc
Confidence 13367999999989888877666 577776664 666643
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00025 Score=58.57 Aligned_cols=80 Identities=23% Similarity=0.307 Sum_probs=67.2
Q ss_pred EEEEecCCCchHHHHHHHHHh----CCCeEEEecCChhhHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 19 TALVTGGTRGIGQATVEELAG----LGAVVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~----~G~~V~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
-++|-||||.-|.-++.++.. .|..+.+.+||++++++..+...... .....+.+|.+|++++.+++.++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~-- 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA-- 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence 579999999999999999999 77889999999999999888875442 22337789999999999998866
Q ss_pred hcCCcccEEEecCCCC
Q 027816 91 KFNGKLNILVNNVGTN 106 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~ 106 (218)
.+|+||+|.+
T Consensus 85 ------~vivN~vGPy 94 (423)
T KOG2733|consen 85 ------RVIVNCVGPY 94 (423)
T ss_pred ------EEEEeccccc
Confidence 6799999854
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00028 Score=72.26 Aligned_cols=186 Identities=16% Similarity=0.158 Sum_probs=114.5
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+.++.++|++.+++++.+++.+|.++|+.|+.+........ ....+ ...+..+...--+..++..+++.+.... +
T Consensus 1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 1827 (2582)
T TIGR02813 1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSH-SASPL---ASAIASVTLGTIDDTSIEAVIKDIEEKT-A 1827 (2582)
T ss_pred ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccccc-ccccc---ccccccccccccchHHHHHHHHhhhccc-c
Confidence 34778888888999999999999999998877643221100 00000 0111222344445677777777776654 6
Q ss_pred cccEEEecCCCCCCC--CCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCch------
Q 027816 95 KLNILVNNVGTNIRK--PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI------ 166 (218)
Q Consensus 95 ~id~vv~~ag~~~~~--~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~------ 166 (218)
.++.+||..+..... +...... ...-...+...+.++|.+.+.+...+.+.++.++...|..+......
T Consensus 1828 ~~~g~i~l~~~~~~~~~~~~~~~~---~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~ 1904 (2582)
T TIGR02813 1828 QIDGFIHLQPQHKSVADKVDAIEL---PEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQ 1904 (2582)
T ss_pred ccceEEEecccccccccccccccc---chhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccc
Confidence 899999987754210 1111111 11111334445667777656555555678899998877776543322
Q ss_pred --hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 167 --YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 167 --Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
-....+++.+|+|++++||+.-.+|...+.|..-.....+.+
T Consensus 1905 ~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~~~~~~a~~l 1948 (2582)
T TIGR02813 1905 VKAELNQAALAGLTKTLNHEWNAVFCRALDLAPKLDADKAATAV 1948 (2582)
T ss_pred cccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCcChHHHHHHH
Confidence 134578999999999999987778888888865443444433
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.93 E-value=4.3e-05 Score=63.58 Aligned_cols=115 Identities=12% Similarity=0.110 Sum_probs=63.2
Q ss_pred EEEEecCCCchHHHHHHHHHhCC-------CeEEEecCChhh--HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLG-------AVVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+|+||||+|.+|..++..|+.++ .+|++.++++.. ++....++.+... ....|+....+..+.+
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~---~~~~~~~~~~~~~~~l---- 76 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAF---PLLKSVVATTDPEEAF---- 76 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccc---cccCCceecCCHHHHh----
Confidence 58999999999999999999855 589999986532 2211111111000 0011222122221212
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC--CCCeEEEEec
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISS 154 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~--~~~~iv~~ss 154 (218)
...|+|||.||.... ...+. .+.++.|+.- ++...+.+.+. +.+.++++|.
T Consensus 77 ----~~aDiVI~tAG~~~~---~~~~R---~~l~~~N~~i----~~~i~~~i~~~~~~~~iiivvsN 129 (325)
T cd01336 77 ----KDVDVAILVGAMPRK---EGMER---KDLLKANVKI----FKEQGEALDKYAKKNVKVLVVGN 129 (325)
T ss_pred ----CCCCEEEEeCCcCCC---CCCCH---HHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEecC
Confidence 257999999997432 12233 3345556543 34444444555 2455666665
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00039 Score=56.84 Aligned_cols=139 Identities=20% Similarity=0.261 Sum_probs=83.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+|+++++|.++++.+.+.|++|++++++.+..+... .+ +.. ..+|..+.+..+.+.+.. + +..
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~---~~~~~~~~~~~~~~~~~~-~--~~~ 213 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA---GAD---AVFNYRAEDLADRILAAT-A--GQG 213 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCC---EEEeCCCcCHHHHHHHHc-C--CCc
Confidence 5789999999999999999999999999999999887655442 22 111 124444444444433322 1 135
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCC------------ccCcCCC
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG------------GLSHVGS 163 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~------------~~~~~~~ 163 (218)
+|.+++++|.. ..... ...+. ..|+++.+++.. .....++
T Consensus 214 ~d~vi~~~~~~-----------~~~~~---------------~~~l~--~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (325)
T cd08253 214 VDVIIEVLANV-----------NLAKD---------------LDVLA--PGGRIVVYGSGGLRGTIPINPLMAKEASIRG 265 (325)
T ss_pred eEEEEECCchH-----------HHHHH---------------HHhhC--CCCEEEEEeecCCcCCCChhHHHhcCceEEe
Confidence 89999987621 01100 11122 236888876522 0111122
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEE
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRT 192 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v 192 (218)
...|...|.....+.+.+...+....++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 294 (325)
T cd08253 266 VLLYTATPEERAAAAEAIAAGLADGALRP 294 (325)
T ss_pred eehhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence 23566777777777777766665555543
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.80 E-value=4.7e-05 Score=58.08 Aligned_cols=80 Identities=24% Similarity=0.253 Sum_probs=47.7
Q ss_pred cCCcEEEEecCC----------------CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCH
Q 027816 15 LKGMTALVTGGT----------------RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78 (218)
Q Consensus 15 ~~~k~vlItGa~----------------~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 78 (218)
++||+||||+|. |-.|.++|+++..+|++|.++..+.. ... ...+..+ ++.+.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i--~v~sa 69 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVI--RVESA 69 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEE--E-SSH
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEE--Eecch
Confidence 468999999874 67899999999999999988877642 111 1123333 34444
Q ss_pred HHHHHHHHHHHhhcCCcccEEEecCCCCCCC
Q 027816 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRK 109 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~ 109 (218)
++ +++.+.+.+ ..-|++|++|++....
T Consensus 70 ~e---m~~~~~~~~-~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 70 EE---MLEAVKELL-PSADIIIMAAAVSDFR 96 (185)
T ss_dssp HH---HHHHHHHHG-GGGSEEEE-SB--SEE
T ss_pred hh---hhhhhcccc-CcceeEEEecchhhee
Confidence 44 455555555 3459999999986543
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00018 Score=53.03 Aligned_cols=76 Identities=20% Similarity=0.300 Sum_probs=54.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
..++++++|+|+ |++|..+++.|.+.| .+|.+.+|+.+..++..+++.... +..+.++.++. .
T Consensus 16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~ 79 (155)
T cd01065 16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L 79 (155)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence 456789999998 899999999999996 689999999888777666553221 12233333321 1
Q ss_pred CCcccEEEecCCCC
Q 027816 93 NGKLNILVNNVGTN 106 (218)
Q Consensus 93 ~~~id~vv~~ag~~ 106 (218)
...|+|+++.+..
T Consensus 80 -~~~Dvvi~~~~~~ 92 (155)
T cd01065 80 -AEADLIINTTPVG 92 (155)
T ss_pred -ccCCEEEeCcCCC
Confidence 3679999998754
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00087 Score=48.90 Aligned_cols=111 Identities=12% Similarity=0.100 Sum_probs=69.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+|.|+|++|.+|..++..|...+. ++++.+++++..+....++.+. ........ .+.+++
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~----------- 67 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL----------- 67 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence 688999999999999999999884 8999999998877766666532 12222222 223331
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|++|..+|.... ...+..+ .++.|..-...+.+ .+.+. +.+.++++|.
T Consensus 68 -~~aDivvitag~~~~---~g~sR~~---ll~~N~~i~~~~~~----~i~~~~p~~~vivvtN 119 (141)
T PF00056_consen 68 -KDADIVVITAGVPRK---PGMSRLD---LLEANAKIVKEIAK----KIAKYAPDAIVIVVTN 119 (141)
T ss_dssp -TTESEEEETTSTSSS---TTSSHHH---HHHHHHHHHHHHHH----HHHHHSTTSEEEE-SS
T ss_pred -ccccEEEEecccccc---ccccHHH---HHHHhHhHHHHHHH----HHHHhCCccEEEEeCC
Confidence 356999999997421 2233333 34555544444444 34443 4456666664
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00034 Score=56.73 Aligned_cols=76 Identities=14% Similarity=0.243 Sum_probs=54.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
..+|+++|+|+ ||+|+++++.|++.|++|.+++|+.++.++..+.+...+ .+..... ++. .. .
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~-----~~~---------~~-~ 177 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSM-----DEL---------PL-H 177 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEech-----hhh---------cc-c
Confidence 45789999999 699999999999999999999999888877776654322 1221111 110 01 3
Q ss_pred cccEEEecCCCCC
Q 027816 95 KLNILVNNVGTNI 107 (218)
Q Consensus 95 ~id~vv~~ag~~~ 107 (218)
..|+||++.+...
T Consensus 178 ~~DivInatp~gm 190 (270)
T TIGR00507 178 RVDLIINATSAGM 190 (270)
T ss_pred CccEEEECCCCCC
Confidence 5799999988653
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=9.9e-05 Score=64.06 Aligned_cols=80 Identities=23% Similarity=0.270 Sum_probs=52.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||+++|||+++ +|.++|+.|+++|++|++.+++........+.+...+..+. ..+ +..++ .+
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~--~~~--~~~~~---~~------- 66 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI--CGS--HPLEL---LD------- 66 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE--eCC--CCHHH---hc-------
Confidence 35789999999986 99999999999999999999866443333344444333221 111 11211 11
Q ss_pred CcccEEEecCCCCCC
Q 027816 94 GKLNILVNNVGTNIR 108 (218)
Q Consensus 94 ~~id~vv~~ag~~~~ 108 (218)
..+|+||.++|+...
T Consensus 67 ~~~d~vV~s~gi~~~ 81 (447)
T PRK02472 67 EDFDLMVKNPGIPYT 81 (447)
T ss_pred CcCCEEEECCCCCCC
Confidence 137999999997543
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00022 Score=63.18 Aligned_cols=48 Identities=23% Similarity=0.185 Sum_probs=41.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
.++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+.+
T Consensus 375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 3577899999999 69999999999999999999999988877776554
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00039 Score=57.81 Aligned_cols=111 Identities=12% Similarity=0.128 Sum_probs=64.5
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-------eEEEecCCh--hhHHHHHHHhhhCCCeEEEEEeeCCCHHHH--H--HHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQR--E--KLI 85 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~--~--~~~ 85 (218)
+|.|+||+|.+|..++..|+.+|. ++++.++++ +.++ ....|+.+.... . .+-
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~--------------g~~~Dl~d~~~~~~~~~~i~ 67 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE--------------GVVMELQDCAFPLLKGVVIT 67 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc--------------eeeeehhhhcccccCCcEEe
Confidence 579999999999999999998763 499999977 4322 223344433100 0 000
Q ss_pred HHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC--CCCeEEEEec
Q 027816 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISS 154 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~--~~~~iv~~ss 154 (218)
....+.+ ...|+||+.||.... ...+..+ .++.| ..+++.+.+.+.+. +.+.++++|.
T Consensus 68 ~~~~~~~-~~aDiVVitAG~~~~---~g~tR~d---ll~~N----~~i~~~i~~~i~~~~~~~~iiivvsN 127 (323)
T cd00704 68 TDPEEAF-KDVDVAILVGAFPRK---PGMERAD---LLRKN----AKIFKEQGEALNKVAKPTVKVLVVGN 127 (323)
T ss_pred cChHHHh-CCCCEEEEeCCCCCC---cCCcHHH---HHHHh----HHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 1112222 357999999997422 2234333 34444 44556666666666 3445566553
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00075 Score=55.88 Aligned_cols=113 Identities=15% Similarity=0.142 Sum_probs=61.5
Q ss_pred cEEEEecCCCchHHHHHHHHHh-CC--CeEEEecCChhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAG-LG--AVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~-~G--~~V~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|.||+|++|.+++..+.. .+ .++++.++++. .....-++.+.. ..+.. ++-.+ +.+ .+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~--~~~~d---~~~---~l---- 67 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKG--FSGED---PTP---AL---- 67 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEE--eCCCC---HHH---Hc----
Confidence 4789999999999999998865 33 47888888743 221111222211 12221 12112 111 11
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss 154 (218)
...|+||.++|..... +.+. ...+..|......+ .+.|.+....++|.+.|
T Consensus 68 -~~~DiVIitaG~~~~~---~~~R---~dll~~N~~i~~~i----i~~i~~~~~~~ivivvs 118 (312)
T PRK05086 68 -EGADVVLISAGVARKP---GMDR---SDLFNVNAGIVKNL----VEKVAKTCPKACIGIIT 118 (312)
T ss_pred -CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHHHhCCCeEEEEcc
Confidence 2379999999974321 2222 33455665555444 44456555455555544
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0039 Score=50.40 Aligned_cols=143 Identities=14% Similarity=0.166 Sum_probs=79.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhH-------------------HHHHHHhhhCC--CeEEEE
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVEL-------------------NKCLKEWQSKG--FVVSGS 71 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~-------------------~~~~~~~~~~~--~~v~~~ 71 (218)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.+++.+.-.. +.+.+.+.+-+ .++..+
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 457788898875 5999999999999995 788887542211 12222222222 223322
Q ss_pred EeeCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEE
Q 027816 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVF 151 (218)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~ 151 (218)
. +.-+.+...+++. ...|+||.+.+. +..-..+.+.+ .+.+ -.++.
T Consensus 106 ~-~~i~~e~~~~ll~-------~~~D~VIdaiD~---------------------~~~k~~L~~~c----~~~~-ip~I~ 151 (268)
T PRK15116 106 D-DFITPDNVAEYMS-------AGFSYVIDAIDS---------------------VRPKAALIAYC----RRNK-IPLVT 151 (268)
T ss_pred e-cccChhhHHHHhc-------CCCCEEEEcCCC---------------------HHHHHHHHHHH----HHcC-CCEEE
Confidence 1 1112333333221 245677666441 11112223333 2332 34565
Q ss_pred EecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhcc-CCeE
Q 027816 152 ISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK-DNIR 191 (218)
Q Consensus 152 ~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~-~gv~ 191 (218)
.....+...+.-...-..+|....-|++.+++++.. +||+
T Consensus 152 ~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~ 192 (268)
T PRK15116 152 TGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV 192 (268)
T ss_pred ECCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence 555555555444455667778888999999999987 5664
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0015 Score=54.30 Aligned_cols=145 Identities=10% Similarity=0.030 Sum_probs=90.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-------eEEEecCChhh--HHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVE--LNKCLKEWQSKG----FVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~ 84 (218)
++|.|+||+|.+|..++..++.+|. ++++.+.++.. ++....++.+.. ..+. ..-.+.++
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~---i~~~~~~~---- 75 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV---ITDDPNVA---- 75 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE---EecCcHHH----
Confidence 5789999999999999999998874 79999985543 444433443321 1111 11111222
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCc-----
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGG----- 157 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~----- 157 (218)
+ ..-|+||.+||.... ...+..+ .++.| ..+++.+.+.+.+.. .+.++++|.-..
T Consensus 76 ---~-----~daDivvitaG~~~k---~g~tR~d---ll~~N----~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~ 137 (322)
T cd01338 76 ---F-----KDADWALLVGAKPRG---PGMERAD---LLKAN----GKIFTAQGKALNDVASRDVKVLVVGNPCNTNALI 137 (322)
T ss_pred ---h-----CCCCEEEEeCCCCCC---CCCcHHH---HHHHH----HHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence 1 346999999997422 2233333 34444 445566666666654 456666665221
Q ss_pred ---cC-cCCCCchhhhhHHHHHHHHHHHHHHhcc
Q 027816 158 ---LS-HVGSGSIYGATKAAMNQLTRNLACEWAK 187 (218)
Q Consensus 158 ---~~-~~~~~~~Y~~sK~a~~~~~~~l~~e~~~ 187 (218)
.. +.|....|+.++.--..|...+++.+.-
T Consensus 138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv 171 (322)
T cd01338 138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV 171 (322)
T ss_pred HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence 12 2566678999999999999999998753
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0021 Score=52.96 Aligned_cols=79 Identities=29% Similarity=0.410 Sum_probs=56.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+++++|+|+++++|.++++.+...|++|++++++.+..+.. ... +.. ...|..+.+..+.+.+.... ..
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---~~~---~~~~~~~~~~~~~~~~~~~~---~~ 235 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL---GAD---YVIDYRKEDFVREVRELTGK---RG 235 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC---eEEecCChHHHHHHHHHhCC---CC
Confidence 567999999999999999999999999999999888765544 222 111 12455555555554443322 36
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|.+++++|
T Consensus 236 ~d~~i~~~g 244 (342)
T cd08266 236 VDVVVEHVG 244 (342)
T ss_pred CcEEEECCc
Confidence 899999987
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00033 Score=57.08 Aligned_cols=48 Identities=27% Similarity=0.376 Sum_probs=42.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~ 62 (218)
++++|+++|+|+ ||+|+++++.|.+.| .+|.+++|+.++.+++.+.+.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 567899999997 899999999999999 689999999988877776654
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0013 Score=56.07 Aligned_cols=83 Identities=12% Similarity=0.109 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
..|+|||||++..+|..+++.|.+.|++|++++.+........+.+. ....+...-.+.+...+.+.++.++. .
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~--~ 76 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE--N 76 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc--C
Confidence 45899999999999999999999999999999887654432222111 12222112223444434444444443 4
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+||-...
T Consensus 77 id~vIP~~e 85 (389)
T PRK06849 77 IDLLIPTCE 85 (389)
T ss_pred CCEEEECCh
Confidence 788886654
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0081 Score=47.54 Aligned_cols=148 Identities=18% Similarity=0.196 Sum_probs=83.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChh-------------------hHHHHHHHhhhC--CCeEEEE
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV-------------------ELNKCLKEWQSK--GFVVSGS 71 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~-------------------~~~~~~~~~~~~--~~~v~~~ 71 (218)
.+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.= +.+...+.+.+- ..++..+
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 456778899876 6899999999999997 7888876421 112222233222 2334444
Q ss_pred EeeCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEE
Q 027816 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVF 151 (218)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~ 151 (218)
...++ .+...+++. ...|+||.+... +..-..+.+.+ .+.+ -.+|.
T Consensus 87 ~~~i~-~~~~~~l~~-------~~~D~VvdaiD~---------------------~~~k~~L~~~c----~~~~-ip~I~ 132 (231)
T cd00755 87 EEFLT-PDNSEDLLG-------GDPDFVVDAIDS---------------------IRAKVALIAYC----RKRK-IPVIS 132 (231)
T ss_pred eeecC-HhHHHHHhc-------CCCCEEEEcCCC---------------------HHHHHHHHHHH----HHhC-CCEEE
Confidence 33333 223222221 246777766431 11112233433 2222 24555
Q ss_pred EecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeE--EEEee
Q 027816 152 ISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR--TNSVA 196 (218)
Q Consensus 152 ~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~--v~~v~ 196 (218)
..+.++...+..-..-..+|.-..-+++.+++++...|++ +-+|.
T Consensus 133 s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~ 179 (231)
T cd00755 133 SMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVY 179 (231)
T ss_pred EeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEe
Confidence 5444444433333455667777788999999999888875 65555
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0077 Score=49.96 Aligned_cols=113 Identities=11% Similarity=0.084 Sum_probs=71.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++++|.|+|+ |.+|..++..++..|. ++++.+++++.++....++.+.. ..+.. .. .+.++ +
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~~-------~-- 71 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYSD-------C-- 71 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHHH-------h--
Confidence 4678999998 9999999999999986 89999999988877777776542 12221 11 12222 2
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|++|..||.... ...+..+ .++.|.. +++.+.+.+.+. +.+.++++|.
T Consensus 72 ---~~adivIitag~~~k---~g~~R~d---ll~~N~~----i~~~i~~~i~~~~~~~~vivvsN 123 (315)
T PRK00066 72 ---KDADLVVITAGAPQK---PGETRLD---LVEKNLK----IFKSIVGEVMASGFDGIFLVASN 123 (315)
T ss_pred ---CCCCEEEEecCCCCC---CCCCHHH---HHHHHHH----HHHHHHHHHHHhCCCeEEEEccC
Confidence 245999999997422 1234333 3444543 334444444543 3456666665
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0057 Score=50.52 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=68.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++|.|.|+ |++|+.++..|+..| .+|++++++++..+....++.+.. ...... . .+.++ +
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-------l--- 66 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-------C--- 66 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-------h---
Confidence 36788896 899999999999999 489999999988877776664331 111111 1 22222 1
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|++|+++|.... ...+..+ .++.|. .+++...+.+.+. +.+.++++|.
T Consensus 67 --~~aDIVIitag~~~~---~g~~R~d---ll~~N~----~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 67 --KDADIVVITAGAPQK---PGETRLD---LLEKNA----KIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred --CCCCEEEEccCCCCC---CCCCHHH---HHHHHH----HHHHHHHHHHHHhCCCeEEEEecC
Confidence 246999999987422 1233333 334444 3445555545554 3456666665
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00096 Score=54.47 Aligned_cols=48 Identities=31% Similarity=0.422 Sum_probs=41.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~ 62 (218)
++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.+.
T Consensus 122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 357899999976 8999999999999997 79999999998888776653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00086 Score=57.61 Aligned_cols=47 Identities=13% Similarity=0.250 Sum_probs=41.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 61 (218)
++.+|+++|.|+ |++|+.+++.|++.|. ++.++.|+.++.+.+.+++
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~ 225 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF 225 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence 467899999998 9999999999999996 7999999988877776654
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0011 Score=55.27 Aligned_cols=113 Identities=13% Similarity=0.117 Sum_probs=65.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-------eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHH--HHH--HH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQRE--KLI--QE 87 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~--~~~--~~ 87 (218)
+|.|+||+|.+|..++..|+..|. ++++.++++... .......|+.+..... ... ..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~ 68 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD 68 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence 478999999999999999998653 599999865431 0122334554444110 000 01
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC--CCCeEEEEec
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISS 154 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~--~~~~iv~~ss 154 (218)
..+.+ ...|+||+.||.... .. +++.+.++.|+.- ++.+.+.+.+. +.+.++++|.
T Consensus 69 ~~~~~-~~aDiVVitAG~~~~---~~---~tr~~ll~~N~~i----~k~i~~~i~~~~~~~~iiivvsN 126 (324)
T TIGR01758 69 PAVAF-TDVDVAILVGAFPRK---EG---MERRDLLSKNVKI----FKEQGRALDKLAKKDCKVLVVGN 126 (324)
T ss_pred hHHHh-CCCCEEEEcCCCCCC---CC---CcHHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEeCC
Confidence 11222 357999999997422 12 2345556666544 45555555665 3355666664
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0025 Score=52.12 Aligned_cols=50 Identities=16% Similarity=0.186 Sum_probs=43.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK 64 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~ 64 (218)
+.++|+++|.|+ ||.|++++..|++.|. +|.+++|+.++.+.+.+++...
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR 174 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 457889999997 6799999999999997 7999999999988888777544
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0019 Score=53.90 Aligned_cols=78 Identities=27% Similarity=0.433 Sum_probs=50.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC-c
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG-K 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~-~ 95 (218)
|.++||+||+||+|...+...-..|+.++++..++++.+ ..+++.. +.. .|..+.+ +.+++++..++ .
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGA---d~v---i~y~~~~----~~~~v~~~t~g~g 211 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGA---DHV---INYREED----FVEQVRELTGGKG 211 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCC---CEE---EcCCccc----HHHHHHHHcCCCC
Confidence 789999999999999998888889977666666665555 4443322 111 2222222 33444444434 5
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++...|.
T Consensus 212 vDvv~D~vG~ 221 (326)
T COG0604 212 VDVVLDTVGG 221 (326)
T ss_pred ceEEEECCCH
Confidence 9999998873
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00094 Score=51.71 Aligned_cols=48 Identities=27% Similarity=0.241 Sum_probs=41.7
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 60 (218)
..+++||+++|.|.+ .+|+.+++.|.+.|++|++.+++.++.+...+.
T Consensus 23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 347889999999996 899999999999999999999998877766554
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0013 Score=53.73 Aligned_cols=43 Identities=23% Similarity=0.435 Sum_probs=37.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
++++||+++|.|. |++|+.+++.|...|++|.+.+|+.+....
T Consensus 147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR 189 (287)
T ss_pred CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 4778999999999 669999999999999999999999876544
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0008 Score=54.03 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=51.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++|||+|||+- |+.++++|.++|++|+...+++...+...+ .+ ...+..+..+.+++.+++.+ ..+|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~------~~i~ 67 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR------HSID 67 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh------cCCC
Confidence 47999999998 999999999999999998888765332221 11 12233556667776555543 3688
Q ss_pred EEEecCC
Q 027816 98 ILVNNVG 104 (218)
Q Consensus 98 ~vv~~ag 104 (218)
+||..+.
T Consensus 68 ~VIDAtH 74 (256)
T TIGR00715 68 ILVDATH 74 (256)
T ss_pred EEEEcCC
Confidence 8888874
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0045 Score=50.53 Aligned_cols=48 Identities=15% Similarity=0.166 Sum_probs=41.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~ 62 (218)
+.++|+++|.|| ||-|++++..|++.|+ +|.+++|+.++.+++.+.+.
T Consensus 124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~ 172 (283)
T PRK14027 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN 172 (283)
T ss_pred CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence 456899999997 8999999999999997 79999999988888777654
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0046 Score=52.45 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=53.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+.+++++|.|+ |.+|+..++.+...|++|.+++|+.++.+...+.+. .. +..+..+.+++.+.+ .
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g---~~---v~~~~~~~~~l~~~l--------~ 229 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG---GR---IHTRYSNAYEIEDAV--------K 229 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC---ce---eEeccCCHHHHHHHH--------c
Confidence 45677899987 789999999999999999999999877665544321 11 123444555544333 2
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
..|++|++++.
T Consensus 230 ~aDvVI~a~~~ 240 (370)
T TIGR00518 230 RADLLIGAVLI 240 (370)
T ss_pred cCCEEEEcccc
Confidence 45999998865
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.014 Score=50.44 Aligned_cols=111 Identities=12% Similarity=-0.012 Sum_probs=72.2
Q ss_pred EEEEecCCCchHHHHHHHHHhC-------CC--eEEEecCChhhHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGL-------GA--VVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~~ 85 (218)
+|.|+|++|.+|.+++..|+.. |. ++++.+++++.++...-++.+.. ..+. +.. .+.+++
T Consensus 102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye~~---- 174 (444)
T PLN00112 102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYEVF---- 174 (444)
T ss_pred EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHHHh----
Confidence 6899999999999999999988 74 79999999999887777776542 1111 111 123331
Q ss_pred HHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh--CCCCeEEEEec
Q 027816 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA--SGVGSIVFISS 154 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~--~~~~~iv~~ss 154 (218)
..-|++|..||... + ...+..+ .++.|. .+++...+.+.+ .+.+.|+++|.
T Consensus 175 --------kdaDiVVitAG~pr-k--pG~tR~d---Ll~~N~----~I~k~i~~~I~~~a~p~~ivIVVsN 227 (444)
T PLN00112 175 --------QDAEWALLIGAKPR-G--PGMERAD---LLDING----QIFAEQGKALNEVASRNVKVIVVGN 227 (444)
T ss_pred --------CcCCEEEECCCCCC-C--CCCCHHH---HHHHHH----HHHHHHHHHHHHhcCCCeEEEEcCC
Confidence 35699999999742 2 2233333 344554 444555555566 34456666665
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0038 Score=52.45 Aligned_cols=79 Identities=22% Similarity=0.357 Sum_probs=51.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|+.+||.||+||.|.+.+.-+...|+..+++.++.+.. ++.+.+... ...|-.+.+.+ +++++..++.
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGAd------~vvdy~~~~~~----e~~kk~~~~~ 225 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGAD------EVVDYKDENVV----ELIKKYTGKG 225 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCCc------EeecCCCHHHH----HHHHhhcCCC
Confidence 578999999999999999988888895444444444443 344444321 12566664443 3333332357
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+|+.|.|.
T Consensus 226 ~DvVlD~vg~ 235 (347)
T KOG1198|consen 226 VDVVLDCVGG 235 (347)
T ss_pred ccEEEECCCC
Confidence 9999999985
|
|
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.014 Score=44.10 Aligned_cols=78 Identities=19% Similarity=0.103 Sum_probs=53.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCe---EEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++++|-.|++.|. ++..+++++.+|+.++++++..+...+.+...+.. +..+.+|+.+. +.+
T Consensus 23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-- 88 (188)
T PRK14968 23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-- 88 (188)
T ss_pred CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--
Confidence 56789999988777 55556666889999999988776665555433221 67777876431 111
Q ss_pred CCcccEEEecCCCCCC
Q 027816 93 NGKLNILVNNVGTNIR 108 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~ 108 (218)
...|.|+.|..+...
T Consensus 89 -~~~d~vi~n~p~~~~ 103 (188)
T PRK14968 89 -DKFDVILFNPPYLPT 103 (188)
T ss_pred -cCceEEEECCCcCCC
Confidence 257999999876543
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0056 Score=49.78 Aligned_cols=106 Identities=17% Similarity=0.216 Sum_probs=70.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHh-CCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+++|++|+|..|.-. -++++ .|++|+.++-++++..-+.+++.- +.. .|-... + +.+.+++..+.
T Consensus 150 ~GetvvVSaAaGaVGsvv-gQiAKlkG~rVVGiaGg~eK~~~l~~~lGf---D~~---idyk~~-d---~~~~L~~a~P~ 218 (340)
T COG2130 150 AGETVVVSAAAGAVGSVV-GQIAKLKGCRVVGIAGGAEKCDFLTEELGF---DAG---IDYKAE-D---FAQALKEACPK 218 (340)
T ss_pred CCCEEEEEecccccchHH-HHHHHhhCCeEEEecCCHHHHHHHHHhcCC---cee---eecCcc-c---HHHHHHHHCCC
Confidence 489999999999999754 45554 789999999999988776665421 111 233222 2 34444454555
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~ 160 (218)
.||+.+-|.|. ++ +.+.++.|+.. +||+++.-++.+..
T Consensus 219 GIDvyfeNVGg----~v----------------------~DAv~~~ln~~--aRi~~CG~IS~YN~ 256 (340)
T COG2130 219 GIDVYFENVGG----EV----------------------LDAVLPLLNLF--ARIPVCGAISQYNA 256 (340)
T ss_pred CeEEEEEcCCc----hH----------------------HHHHHHhhccc--cceeeeeehhhcCC
Confidence 79999999984 21 13444555433 58888887776654
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0015 Score=49.12 Aligned_cols=45 Identities=22% Similarity=0.341 Sum_probs=38.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+++||+++|.|++..+|..+++.|.++|++|.++.|+.+.+.+.
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~ 84 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEH 84 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHH
Confidence 368899999999987889999999999999999999986544433
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0063 Score=49.53 Aligned_cols=80 Identities=24% Similarity=0.421 Sum_probs=54.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+++++|+|+++++|..++..+...|++|+++.++.+..+.. +.+. .. ...|..+.+..+++.+.. . ++.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g---~~---~~~~~~~~~~~~~~~~~~-~--~~~ 208 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALG---AD---VAINYRTEDFAEEVKEAT-G--GRG 208 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcC---CC---EEEeCCchhHHHHHHHHh-C--CCC
Confidence 468999999999999999999999999999999987766544 3321 11 123444433333333222 1 136
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|.+++++|.
T Consensus 209 ~d~vi~~~g~ 218 (323)
T cd05276 209 VDVILDMVGG 218 (323)
T ss_pred eEEEEECCch
Confidence 8999999873
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0071 Score=50.68 Aligned_cols=37 Identities=22% Similarity=0.405 Sum_probs=32.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE 51 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~ 51 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++++.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 467789999997 6799999999999997 899998863
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0011 Score=57.60 Aligned_cols=79 Identities=19% Similarity=0.130 Sum_probs=55.0
Q ss_pred ccCCcEEEEecCC----------------CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC
Q 027816 14 SLKGMTALVTGGT----------------RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77 (218)
Q Consensus 14 ~~~~k~vlItGa~----------------~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 77 (218)
+++||+||||+|. |-.|.+||+++..+|++|.++.-+... . ....+..+.+
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~--------~-~p~~v~~i~V---- 319 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL--------A-DPQGVKVIHV---- 319 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC--------C-CCCCceEEEe----
Confidence 5899999999984 567999999999999999888643221 0 1112333333
Q ss_pred HHHHHHHHHHHHhhcCCcccEEEecCCCCCC
Q 027816 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIR 108 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~ 108 (218)
++.+++.+.+.+.+ +.|++|++|++...
T Consensus 320 -~ta~eM~~av~~~~--~~Di~I~aAAVaDy 347 (475)
T PRK13982 320 -ESARQMLAAVEAAL--PADIAIFAAAVADW 347 (475)
T ss_pred -cCHHHHHHHHHhhC--CCCEEEEeccccce
Confidence 34555666666665 36999999997643
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0047 Score=51.43 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+++|+||+|++|..++..+...|++|+.+.++.++.+...+.+.. .. ..|-.+.++..+.+.+. .++.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa---~~---vi~~~~~~~~~~~i~~~---~~~g 221 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF---DD---AFNYKEEPDLDAALKRY---FPNG 221 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---ce---eEEcCCcccHHHHHHHh---CCCC
Confidence 478999999999999999888888999999988888776655432321 11 12322222333333332 2235
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 222 vd~v~d~~g 230 (338)
T cd08295 222 IDIYFDNVG 230 (338)
T ss_pred cEEEEECCC
Confidence 899998866
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.013 Score=48.62 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=66.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..++|.|+|| |.+|..++..++..| .++++.+++++..+...-++.... .... +.. -++.++ +
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~-------l-- 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYED-------I-- 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHH-------h--
Confidence 4568899997 889999999999999 689999998876543322222211 0111 111 122222 1
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEec
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISS 154 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss 154 (218)
..-|+||.++|.... ...+.+ +.+..|. .+.+.+.+.+.+..+ +.++++|.
T Consensus 72 ---~~ADiVVitag~~~~---~g~~r~---dll~~n~----~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 72 ---KDSDVVVITAGVQRK---EEMTRE---DLLTING----KIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred ---CCCCEEEECCCCCCC---CCCCHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence 245999999986321 223333 3344554 445566666665543 44666665
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0053 Score=51.53 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=52.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+++|+||+|++|..++..+...|++|+.++++.++.+...+++.. .. ..|-.+.+++.+.+.+. .++.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa---~~---vi~~~~~~~~~~~i~~~---~~~g 228 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF---DE---AFNYKEEPDLDAALKRY---FPEG 228 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC---CE---EEECCCcccHHHHHHHH---CCCC
Confidence 478999999999999999888878899999988888776554433321 11 12322222333333322 2235
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 229 vD~v~d~vG 237 (348)
T PLN03154 229 IDIYFDNVG 237 (348)
T ss_pred cEEEEECCC
Confidence 899998876
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0058 Score=49.31 Aligned_cols=44 Identities=20% Similarity=0.150 Sum_probs=37.1
Q ss_pred EEEecCCCchHHHHHHHHHhCC----CeEEEecCChhhHHHHHHHhhh
Q 027816 20 ALVTGGTRGIGQATVEELAGLG----AVVHTCSRNEVELNKCLKEWQS 63 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~ 63 (218)
+.|.||+|.+|..++..|+..| .+|++.++++++++....++++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~ 48 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD 48 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence 4689998999999999999999 6899999998887766666543
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0051 Score=50.92 Aligned_cols=79 Identities=15% Similarity=0.179 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+++|+|++|++|..++..+...|++|+.+.+++++.+.. +++.. ... .|..+.+.+.+...... ++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa---~~v---i~~~~~~~~~~~~~~~~---~~g 207 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGF---DVA---FNYKTVKSLEETLKKAS---PDG 207 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC---CEE---EeccccccHHHHHHHhC---CCC
Confidence 478999999999999999888778899999998888765544 33321 111 23333233434343332 235
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 208 vdvv~d~~G 216 (325)
T TIGR02825 208 YDCYFDNVG 216 (325)
T ss_pred eEEEEECCC
Confidence 899998876
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0079 Score=49.25 Aligned_cols=49 Identities=18% Similarity=0.199 Sum_probs=38.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChh---hHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQ 62 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~ 62 (218)
.++++|+++|.||+ |-+++++..|+..|+ +|.+++|+.+ +.+.+.+.+.
T Consensus 120 ~~~~~k~vlvlGaG-GaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 120 FDIKGKTMVLLGAG-GASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred CCcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 45678999999985 559999999999997 8999999853 5556655553
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.006 Score=50.83 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=51.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.+++|+||+|++|..++..+...|+ +|+.+.+++++.+.+.+++.. ..+ .|..+ +++.+.+.++ .++.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa--~~v----i~~~~-~~~~~~i~~~---~~~gv 225 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGF--DAA----INYKT-DNVAERLREL---CPEGV 225 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCC--cEE----EECCC-CCHHHHHHHH---CCCCc
Confidence 7999999999999999887778898 799999888776655543422 111 22222 2233333333 22358
Q ss_pred cEEEecCC
Q 027816 97 NILVNNVG 104 (218)
Q Consensus 97 d~vv~~ag 104 (218)
|+++.+.|
T Consensus 226 d~vid~~g 233 (345)
T cd08293 226 DVYFDNVG 233 (345)
T ss_pred eEEEECCC
Confidence 99998876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0057 Score=49.82 Aligned_cols=82 Identities=20% Similarity=0.268 Sum_probs=58.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+.+|++++|.|| ||-+++++..|++.|. +|+++.|+.++.+++.+.+...+..+.. .+..+.+..+
T Consensus 122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~~--------- 189 (283)
T COG0169 122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGLE--------- 189 (283)
T ss_pred cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--cccccccccc---------
Confidence 4556899999985 6789999999999996 7999999999999888887655432221 2222222211
Q ss_pred cCCcccEEEecCCCCCCC
Q 027816 92 FNGKLNILVNNVGTNIRK 109 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~ 109 (218)
..|++||+......+
T Consensus 190 ---~~dliINaTp~Gm~~ 204 (283)
T COG0169 190 ---EADLLINATPVGMAG 204 (283)
T ss_pred ---ccCEEEECCCCCCCC
Confidence 259999998765433
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.04 Score=45.67 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=69.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeE--EEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVV--SGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v--~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++|.|+|+ |.+|..+|..++..|. ++++.+.+++.+.....++.+..... .-+.. -.+.++ +
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-~~dy~~-------~----- 69 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-DKDYSV-------T----- 69 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-CCCHHH-------h-----
Confidence 37789996 9999999999998884 79999999887776666665432100 01111 122322 2
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|+||.+||.... ...+..+ .++.|. .+++.+.+.+.+. +.+.++++|.
T Consensus 70 ~~adivvitaG~~~k---~g~~R~d---ll~~N~----~i~~~~~~~i~~~~p~~~vivvsN 121 (312)
T cd05293 70 ANSKVVIVTAGARQN---EGESRLD---LVQRNV----DIFKGIIPKLVKYSPNAILLVVSN 121 (312)
T ss_pred CCCCEEEECCCCCCC---CCCCHHH---HHHHHH----HHHHHHHHHHHHhCCCcEEEEccC
Confidence 346999999997432 2334433 344444 3445555444544 3456677775
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0065 Score=50.06 Aligned_cols=42 Identities=36% Similarity=0.472 Sum_probs=36.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+.+++|+|+++++|.++++.+...|++|+.+.++.+..+..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~ 203 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL 203 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 467899999999999999999999999999988887665443
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0033 Score=55.12 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=40.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 60 (218)
.++++|+++|+|+ ||+|+++++.|++.|++|.+.+|+.++.+...+.
T Consensus 328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~ 374 (477)
T PRK09310 328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR 374 (477)
T ss_pred CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4567899999996 7999999999999999999999998877666544
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0077 Score=51.96 Aligned_cols=46 Identities=28% Similarity=0.373 Sum_probs=39.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~ 60 (218)
.+.+++++|.|+ |.+|..+++.|.+.| .+|++++|+.++.....+.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~ 223 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE 223 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 467899999997 999999999999999 6899999998876655544
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.016 Score=47.69 Aligned_cols=77 Identities=18% Similarity=0.209 Sum_probs=59.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
...++|-||+|.-|.-+|++|+.+|-+-.+.+||.+++....+.+... .....++ ++..+++.++ +.
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~---~~~~p~~--~p~~~~~~~~--------~~ 72 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE---AAVFPLG--VPAALEAMAS--------RT 72 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc---ccccCCC--CHHHHHHHHh--------cc
Confidence 467899999999999999999999998899999999998887776432 2222333 3555544444 45
Q ss_pred cEEEecCCCC
Q 027816 97 NILVNNVGTN 106 (218)
Q Consensus 97 d~vv~~ag~~ 106 (218)
++|++|+|.+
T Consensus 73 ~VVlncvGPy 82 (382)
T COG3268 73 QVVLNCVGPY 82 (382)
T ss_pred eEEEeccccc
Confidence 8999999965
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.012 Score=48.28 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCC-CHHHHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-SPDQREKLIQEV 88 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~ 88 (218)
-|+++-|+|++| +|.--++..-+.|++|++++++..+.+++.+.+.+. .. +|.+ |.+..+++.+.+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd---~f---v~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD---VF---VDSTEDPDIMKAIMKTT 247 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc---ee---EEecCCHHHHHHHHHhh
Confidence 689999999998 998777766678999999999987777777766432 33 4566 566655555544
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0067 Score=52.42 Aligned_cols=47 Identities=23% Similarity=0.381 Sum_probs=39.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 61 (218)
++.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++...+.+.+
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 367899999987 9999999999999997 7999999988766555543
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.016 Score=48.56 Aligned_cols=36 Identities=28% Similarity=0.448 Sum_probs=32.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.++.++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 466789999998 8999999999999998 89999875
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.047 Score=45.48 Aligned_cols=111 Identities=13% Similarity=0.066 Sum_probs=65.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-------eEEEecCCh--hhHHHHHHHhhhCC-C---eEEEEEeeCCCHHHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNE--VELNKCLKEWQSKG-F---VVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~---~v~~~~~D~~~~~~~~~~~ 85 (218)
+|.|+||+|.+|..++..|+.+|. ++++.+.++ +.++....++.+.. . .+. +.. .+.++
T Consensus 5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~~--~~~~~----- 76 (323)
T TIGR01759 5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-ATT--DPEEA----- 76 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Eec--ChHHH-----
Confidence 689999999999999999998883 799999865 33555554554332 1 111 111 11111
Q ss_pred HHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEec
Q 027816 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISS 154 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss 154 (218)
+ ..-|+||..||... + ...+..+ .++.|.. +++.+.+.+.+.. .+.++++|.
T Consensus 77 --~-----~daDvVVitAG~~~-k--~g~tR~d---ll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN 130 (323)
T TIGR01759 77 --F-----KDVDAALLVGAFPR-K--PGMERAD---LLSKNGK----IFKEQGKALNKVAKKDVKVLVVGN 130 (323)
T ss_pred --h-----CCCCEEEEeCCCCC-C--CCCcHHH---HHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence 1 34599999999742 1 2334333 3445544 4455555556553 455666664
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.034 Score=48.37 Aligned_cols=37 Identities=24% Similarity=0.253 Sum_probs=32.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
+.+|+++|+|.+ ++|.++|+.|+++|++|.+.+....
T Consensus 3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 568899999986 8999999999999999999887554
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.041 Score=45.52 Aligned_cols=113 Identities=15% Similarity=0.151 Sum_probs=64.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCCh--hhHHHHHHHhhhC----CCeEEEEEeeC-CCHHHHHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNE--VELNKCLKEWQSK----GFVVSGSVCDA-ASPDQREKLIQEV 88 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~--~~~~~~~~~~~~~----~~~v~~~~~D~-~~~~~~~~~~~~~ 88 (218)
++|.|+|++|.+|..++..++..|. +|+++++++ ++++....++.+. ..... ... ++.+ .+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~d~~-------~l 70 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISSDLS-------DV 70 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECCCHH-------Hh
Confidence 4689999999999999999999985 599999955 4444333333221 11111 111 1211 12
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecC
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSV 155 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~ 155 (218)
..-|++|.++|.... .+.+.. +.++.|+.-...+.+.+ .+. +.+.++++++.
T Consensus 71 -----~~aDiViitag~p~~---~~~~r~---dl~~~n~~i~~~~~~~i----~~~~~~~~viv~~np 123 (309)
T cd05294 71 -----AGSDIVIITAGVPRK---EGMSRL---DLAKKNAKIVKKYAKQI----AEFAPDTKILVVTNP 123 (309)
T ss_pred -----CCCCEEEEecCCCCC---CCCCHH---HHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCc
Confidence 356999999997421 222322 33344544444444433 333 34567777763
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0028 Score=40.58 Aligned_cols=34 Identities=32% Similarity=0.454 Sum_probs=23.3
Q ss_pred cCC-cEEEEecCCCchHHH--HHHHHHhCCCeEEEecC
Q 027816 15 LKG-MTALVTGGTRGIGQA--TVEELAGLGAVVHTCSR 49 (218)
Q Consensus 15 ~~~-k~vlItGa~~giG~~--la~~l~~~G~~V~~~~r 49 (218)
+.| |+|||+|+|+|+|.+ |+..| ..|++.+.+..
T Consensus 36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f 72 (78)
T PF12242_consen 36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF 72 (78)
T ss_dssp -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence 355 899999999999999 66666 67777766654
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.023 Score=45.46 Aligned_cols=36 Identities=31% Similarity=0.393 Sum_probs=31.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 457789999998 9999999999999997 78888653
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.055 Score=46.11 Aligned_cols=114 Identities=10% Similarity=0.001 Sum_probs=67.7
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-e----EEE----ecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-V----VHT----CSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~----V~~----~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+|.|+||+|.+|..+|..++..|. . |.+ .+++++.++...-++.+.. ....-+..--.+.++ +
T Consensus 46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~-------~ 118 (387)
T TIGR01757 46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEV-------F 118 (387)
T ss_pred EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHH-------h
Confidence 789999999999999999998873 3 444 4888888877766665432 111001100112222 2
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-C-CCCeEEEEec
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-S-GVGSIVFISS 154 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~-~~~~iv~~ss 154 (218)
..-|++|..||... . ...+..+ .++.|+ .+++...+.+.+ . +.+.++++|.
T Consensus 119 -----kdaDIVVitAG~pr-k--pg~tR~d---ll~~N~----~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 119 -----EDADWALLIGAKPR-G--PGMERAD---LLDING----QIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred -----CCCCEEEECCCCCC-C--CCCCHHH---HHHHHH----HHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 35699999999742 1 1233333 344454 444555555565 3 3456666665
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0098 Score=50.63 Aligned_cols=38 Identities=13% Similarity=0.101 Sum_probs=31.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVE 53 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~ 53 (218)
+.++|.|.||+|.+|.++.+.|.++ ..+|..+.++.+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa 75 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA 75 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc
Confidence 4468999999999999999999999 5688888775544
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0087 Score=49.55 Aligned_cols=72 Identities=24% Similarity=0.389 Sum_probs=51.5
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+.+++++|.|+ |.+|..+++.|.+.|. +|.+++|+.++...+.+++.. . ..+.+++.+.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-----~-----~~~~~~~~~~l-------- 236 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-----N-----AVPLDELLELL-------- 236 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-----e-----EEeHHHHHHHH--------
Confidence 57899999987 9999999999998774 799999998887777665421 1 11223333322
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
...|+||.+.+.
T Consensus 237 ~~aDvVi~at~~ 248 (311)
T cd05213 237 NEADVVISATGA 248 (311)
T ss_pred hcCCEEEECCCC
Confidence 245999998774
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.009 Score=41.63 Aligned_cols=71 Identities=24% Similarity=0.244 Sum_probs=52.2
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccEE
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNIL 99 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~v 99 (218)
++|.|. |.+|+.+++.|.+.+..|++++++++..+...+. + +..+..|.++.+.++++-- ...+.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~--~~~i~gd~~~~~~l~~a~i-------~~a~~v 66 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE----G--VEVIYGDATDPEVLERAGI-------EKADAV 66 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----T--SEEEES-TTSHHHHHHTTG-------GCESEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----c--cccccccchhhhHHhhcCc-------cccCEE
Confidence 567777 5799999999999877999999999886655432 2 6678899999998766411 245777
Q ss_pred EecCC
Q 027816 100 VNNVG 104 (218)
Q Consensus 100 v~~ag 104 (218)
+....
T Consensus 67 v~~~~ 71 (116)
T PF02254_consen 67 VILTD 71 (116)
T ss_dssp EEESS
T ss_pred EEccC
Confidence 76654
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.023 Score=43.99 Aligned_cols=36 Identities=25% Similarity=0.430 Sum_probs=31.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.| .||+|.++++.|+..|. ++.+++++
T Consensus 18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 46778899998 57999999999999997 89999876
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.053 Score=44.90 Aligned_cols=114 Identities=13% Similarity=0.086 Sum_probs=64.7
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+|.|+|++|.+|..+|..++.+|. ++++++.+ ..+...-++.+.. ..+.....| +++ .+. + .
T Consensus 2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~~~----~~~---y~~----~-~ 67 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYLGP----EEL---KKA----L-K 67 (310)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEecCC----Cch---HHh----c-C
Confidence 678999999999999999998883 89999988 3333333333321 122211010 111 111 1 3
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCC
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~ 156 (218)
.-|++|.+||.... ...+..+ .++.|..-. +...+.+.+. +.+.++++|.-.
T Consensus 68 daDivvitaG~~~k---~g~tR~d---ll~~N~~i~----~~i~~~i~~~~p~a~vivvtNPv 120 (310)
T cd01337 68 GADVVVIPAGVPRK---PGMTRDD---LFNINAGIV----RDLATAVAKACPKALILIISNPV 120 (310)
T ss_pred CCCEEEEeCCCCCC---CCCCHHH---HHHHHHHHH----HHHHHHHHHhCCCeEEEEccCch
Confidence 56999999997421 1233333 344555444 4444444443 345677777644
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0094 Score=51.78 Aligned_cols=60 Identities=23% Similarity=0.330 Sum_probs=45.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 83 (218)
++++|.|+ |.+|+.+++.|.++|..|++++++++..+...+.. .+..+..|.++.+.+++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~ 60 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVLRE 60 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHHHH
Confidence 36888887 99999999999999999999999988766554311 25556677776655444
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.017 Score=49.09 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=31.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 456788888866 7899999999999998 79999886
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0057 Score=44.05 Aligned_cols=56 Identities=21% Similarity=0.106 Sum_probs=43.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 79 (218)
+++++++.|++ .|.++|..|.+.|++|++++.++...+...+. .+.++..|+.+++
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~ 71 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN 71 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence 46789999998 78888999999999999999999876655433 2566677776543
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.023 Score=48.63 Aligned_cols=48 Identities=25% Similarity=0.318 Sum_probs=41.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~ 62 (218)
++++|++||.|| |-+|.-+|++|+++|. +|.++.|+.++..++.+++.
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~ 223 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG 223 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence 378999999987 5689999999999995 89999999999888887764
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.014 Score=48.05 Aligned_cols=78 Identities=18% Similarity=0.211 Sum_probs=51.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+++|+||+|++|..++..+...|++|+.+.+++++.+.+.+ +.. ..+ .|-.+. ++.+.+.+. .++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga--~~v----i~~~~~-~~~~~v~~~---~~~g 211 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGF--DAV----FNYKTV-SLEEALKEA---APDG 211 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC--CEE----EeCCCc-cHHHHHHHH---CCCC
Confidence 46899999999999999888888899999999888876654433 321 111 233322 222222222 2235
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 212 vd~vld~~g 220 (329)
T cd08294 212 IDCYFDNVG 220 (329)
T ss_pred cEEEEECCC
Confidence 899998866
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.016 Score=46.08 Aligned_cols=78 Identities=27% Similarity=0.319 Sum_probs=51.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+++++|+|+++ +|..++..+...|.+|+.++++++..+.. +... ... ..|..+.+..+.+. . ..++.
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g---~~~---~~~~~~~~~~~~~~--~--~~~~~ 201 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELG---ADH---VIDYKEEDLEEELR--L--TGGGG 201 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhC---Cce---eccCCcCCHHHHHH--H--hcCCC
Confidence 577999999999 99999998888999999999987665543 2221 111 12333333333332 1 11246
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++++++.
T Consensus 202 ~d~vi~~~~~ 211 (271)
T cd05188 202 ADVVIDAVGG 211 (271)
T ss_pred CCEEEECCCC
Confidence 8999998773
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0095 Score=49.00 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=37.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
..+.+++++|.|. |++|+.+++.|...|++|.+.+|+.+..+.
T Consensus 148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~ 190 (296)
T PRK08306 148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR 190 (296)
T ss_pred CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 3567899999997 679999999999999999999999776443
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.06 Score=47.28 Aligned_cols=78 Identities=19% Similarity=0.204 Sum_probs=51.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..+++|+|+|.|+ |++|.++|+.|.++|++|.+.+++... .....+.+...+..+. ..+-.. .
T Consensus 12 ~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~--~~~~~~----------~--- 75 (480)
T PRK01438 12 SDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVR--LGPGPT----------L--- 75 (480)
T ss_pred cCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEE--ECCCcc----------c---
Confidence 4567889999996 779999999999999999999865433 3333344544443332 211111 0
Q ss_pred cCCcccEEEecCCCCC
Q 027816 92 FNGKLNILVNNVGTNI 107 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~ 107 (218)
. ...|.||.+.|..+
T Consensus 76 ~-~~~D~Vv~s~Gi~~ 90 (480)
T PRK01438 76 P-EDTDLVVTSPGWRP 90 (480)
T ss_pred c-CCCCEEEECCCcCC
Confidence 1 24799999998743
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.24 Score=41.29 Aligned_cols=119 Identities=9% Similarity=0.003 Sum_probs=66.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++|.|.|| |.+|..++..++..|. +|++.+.+++......-++... ........ .+|.++ +
T Consensus 6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~-------l--- 72 (321)
T PTZ00082 6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED-------I--- 72 (321)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH-------h---
Confidence 468899995 7899999999999995 8999999888643222211111 11111111 122222 2
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecC
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSV 155 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~ 155 (218)
..-|+||.++|........+.+++. .+.+..|+ .+.+.+.+.+.+.. .+.++++|..
T Consensus 73 --~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP 130 (321)
T PTZ00082 73 --AGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNP 130 (321)
T ss_pred --CCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCc
Confidence 2459999999875422222211111 33444453 34556666556553 3466766653
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0098 Score=52.60 Aligned_cols=47 Identities=23% Similarity=0.329 Sum_probs=41.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 61 (218)
++.+++++|.|+ |.+|..+++.|...|. +|+++.|+.++.+.+.+.+
T Consensus 263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 377899999999 9999999999999997 7999999998877766554
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.14 Score=42.31 Aligned_cols=110 Identities=11% Similarity=0.103 Sum_probs=64.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.|.|.|+ |.+|..++..|+.+| .+|++++++++..+....++.+.. .... +.. .+.+ .+
T Consensus 2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~~--~d~~-------~l----- 65 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IYA--GDYA-------DC----- 65 (308)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeE-Eee--CCHH-------Hh-----
Confidence 5788998 899999999999999 589999999887665444444321 1111 111 1222 12
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|+++.+++.... ...+. .+.+..|..-. +.+.+.+.+. +.+.+++++.
T Consensus 66 ~~aDiViita~~~~~---~~~~r---~dl~~~n~~i~----~~~~~~l~~~~~~giiiv~tN 117 (308)
T cd05292 66 KGADVVVITAGANQK---PGETR---LDLLKRNVAIF----KEIIPQILKYAPDAILLVVTN 117 (308)
T ss_pred CCCCEEEEccCCCCC---CCCCH---HHHHHHHHHHH----HHHHHHHHHHCCCeEEEEecC
Confidence 356999999996422 12222 33344454433 4444443433 3456666654
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.014 Score=44.29 Aligned_cols=44 Identities=25% Similarity=0.287 Sum_probs=36.9
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~ 55 (218)
...+++||++.|.|. |.||+++|+.+..-|.+|+..+|+.....
T Consensus 30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~ 73 (178)
T PF02826_consen 30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE 73 (178)
T ss_dssp TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence 345788999999976 89999999999999999999999887654
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.043 Score=45.78 Aligned_cols=112 Identities=10% Similarity=0.030 Sum_probs=65.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-------eEEEecCChh--hHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEV--ELNKCLKEWQSKG----FVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~ 84 (218)
++|.|+||+|.+|..++..++..|. ++++.+.++. .++....++.+.. ..+.. .. .+.++
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~y~~---- 77 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DPNVA---- 77 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--ChHHH----
Confidence 4789999999999999999998773 6999998543 3443333333221 11111 11 11111
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-C-CCCeEEEEec
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-S-GVGSIVFISS 154 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~-~~~~iv~~ss 154 (218)
+ ..-|+||..||.... ...+..+ .++.| ..+++.+.+.+.+ . +.+.++++|.
T Consensus 78 ---~-----~daDiVVitaG~~~k---~g~tR~d---ll~~N----a~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 78 ---F-----KDADVALLVGARPRG---PGMERKD---LLEAN----GAIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred ---h-----CCCCEEEEeCCCCCC---CCCcHHH---HHHHH----HHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 1 346999999996421 1233333 34444 4455666666666 3 3456666664
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.044 Score=45.43 Aligned_cols=116 Identities=12% Similarity=0.059 Sum_probs=63.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|.|+|++|.+|..+|..|+.++. ++++.++++ .....-++.+.........+. ..++. .+.+ ..-
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~~-------~~~~-~da 68 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEGL-------ENAL-KGA 68 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCch-------HHHc-CCC
Confidence 368999999999999999999885 799999877 222222222211111111100 00011 1112 356
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCC
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVG 156 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~ 156 (218)
|++|..||.... ...+.. +.++.|+. +++...+.+.+. +.+.++++|.-.
T Consensus 69 DivvitaG~~~~---~g~~R~---dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv 119 (312)
T TIGR01772 69 DVVVIPAGVPRK---PGMTRD---DLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV 119 (312)
T ss_pred CEEEEeCCCCCC---CCccHH---HHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence 999999997422 122332 33455554 445555555554 345667777644
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.097 Score=44.09 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=69.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCC---eEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++|.|+|+ |.+|..+|..++..|. ++++.+.+++.+.....++.+... .. -+.. -.+.++ +
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~dy~~-------~---- 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STDYAV-------T---- 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCCHHH-------h----
Confidence 58899996 9999999999998884 799999998877766666654321 11 1111 112222 2
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|+||..||.... ...+..++ +..| ..+++.+.+.+.+. +.+.++++|.
T Consensus 104 -~daDiVVitAG~~~k---~g~tR~dl---l~~N----~~I~~~i~~~I~~~~p~~ivivvtN 155 (350)
T PLN02602 104 -AGSDLCIVTAGARQI---PGESRLNL---LQRN----VALFRKIIPELAKYSPDTILLIVSN 155 (350)
T ss_pred -CCCCEEEECCCCCCC---cCCCHHHH---HHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence 345999999997422 12343333 3334 34445555555554 3456677775
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0093 Score=43.40 Aligned_cols=45 Identities=27% Similarity=0.353 Sum_probs=38.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
..+++||.++|.|.+.-.|+.++..|.++|+.|..+.++...+++
T Consensus 23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 357899999999999999999999999999999999876544443
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.016 Score=55.18 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=59.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC-Ce-------------EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG-AV-------------VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 81 (218)
+.|+|+|.|| |.+|+..++.|++.. ++ |.+++++.+..+.+.+.+. .+..+++|++|.+++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~----~~~~v~lDv~D~e~L 642 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE----NAEAVQLDVSDSESL 642 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC----CCceEEeecCCHHHH
Confidence 4678999997 999999999999764 33 8888999887776665431 356788999999887
Q ss_pred HHHHHHHHhhcCCcccEEEecCCC
Q 027816 82 EKLIQEVGSKFNGKLNILVNNVGT 105 (218)
Q Consensus 82 ~~~~~~~~~~~~~~id~vv~~ag~ 105 (218)
.++++ .+|+||.+...
T Consensus 643 ~~~v~--------~~DaVIsalP~ 658 (1042)
T PLN02819 643 LKYVS--------QVDVVISLLPA 658 (1042)
T ss_pred HHhhc--------CCCEEEECCCc
Confidence 66655 36999988754
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.069 Score=41.36 Aligned_cols=73 Identities=21% Similarity=0.121 Sum_probs=48.2
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChh-hHHHHHHHhhh-----------CCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQS-----------KGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
....||+|-||.+++++|++.|++|++.+|+.+ +.+...+.+.. ...++....+= .+.+..+..+
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~ 79 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE 79 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence 345678999999999999999999998865554 44444443321 12344444333 5677777888
Q ss_pred HHhhcCCc
Q 027816 88 VGSKFNGK 95 (218)
Q Consensus 88 ~~~~~~~~ 95 (218)
+.+.++++
T Consensus 80 l~~~~~~K 87 (211)
T COG2085 80 LRDALGGK 87 (211)
T ss_pred HHHHhCCe
Confidence 87776434
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.067 Score=44.16 Aligned_cols=113 Identities=12% Similarity=0.101 Sum_probs=66.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeE---EEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVV---SGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v---~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++|.|+|+ |.+|..++..|+.++. ++++.+.+++..+....++.+..... .-+..| .+.++ +
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-------~---- 67 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-------L---- 67 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-------h----
Confidence 36788999 9999999999988874 89999999776665555554321100 111122 12222 1
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss 154 (218)
..-|+++..||..-.. ..+..++ ++.|..-. +.+.+.+.+.. .+.|+++|.
T Consensus 68 -~~aDiVvitAG~prKp---GmtR~DL---l~~Na~I~----~~i~~~i~~~~~d~ivlVvtN 119 (313)
T COG0039 68 -KGADIVVITAGVPRKP---GMTRLDL---LEKNAKIV----KDIAKAIAKYAPDAIVLVVTN 119 (313)
T ss_pred -cCCCEEEEeCCCCCCC---CCCHHHH---HHhhHHHH----HHHHHHHHhhCCCeEEEEecC
Confidence 2469999999874321 2344443 44554433 44444444443 355666665
|
|
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.029 Score=45.78 Aligned_cols=79 Identities=24% Similarity=0.407 Sum_probs=52.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+|+++++|..++..+...|++|+.+.++++..+.. ..+ +.. ...+..+.+....+.... . +..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~-~--~~~ 208 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GAD---IAINYREEDFVEVVKAET-G--GKG 208 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc---EEEecCchhHHHHHHHHc-C--CCC
Confidence 468999999999999999999999999999998887765533 332 111 112333333333322222 1 135
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|.+++++|
T Consensus 209 ~d~~i~~~~ 217 (325)
T TIGR02824 209 VDVILDIVG 217 (325)
T ss_pred eEEEEECCc
Confidence 899999877
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.045 Score=42.75 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=31.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 466788999985 8999999999999997 69888876
|
|
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.031 Score=46.10 Aligned_cols=79 Identities=20% Similarity=0.229 Sum_probs=52.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+.+++|.|+++++|..++..+.+.|++|+.+.++.++.+...+.+.. .. ..|..+.+..+++. +..++.
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~--~~----~~~~~~~~~~~~v~----~~~~~~ 214 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGF--DA----AINYKTPDLAEALK----EAAPDG 214 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCC--ce----EEecCChhHHHHHH----HhccCC
Confidence 467999999999999999999999999999998888766544332221 11 12333333222222 222246
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 215 ~d~vi~~~g 223 (329)
T cd05288 215 IDVYFDNVG 223 (329)
T ss_pred ceEEEEcch
Confidence 899998876
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.011 Score=46.28 Aligned_cols=41 Identities=24% Similarity=0.250 Sum_probs=36.0
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
+|.|.||+|.+|..+++.|++.|++|.+.+|++++.+...+
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~ 42 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA 42 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence 58899999999999999999999999999999887665544
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.011 Score=48.08 Aligned_cols=44 Identities=23% Similarity=0.272 Sum_probs=38.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~ 55 (218)
..+++||+++|.|.+.-+|+-++..|.++|++|.++.+....+.
T Consensus 153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~ 196 (286)
T PRK14175 153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMA 196 (286)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence 34789999999999999999999999999999999887654443
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.02 Score=40.42 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=26.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-e-EEEecCCh
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-V-VHTCSRNE 51 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~-V~~~~r~~ 51 (218)
+|.|.||+|.+|..+++.|.++-. + +.+++++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence 578999999999999999999764 5 45555555
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.032 Score=43.09 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=29.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|++| +|.++++.|+..|. ++.+++.+
T Consensus 18 ~L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 18 RLRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HHHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 45678899998655 99999999999997 68888754
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.031 Score=45.67 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=37.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+++++|+|+++++|..++..+...|++|+.+.++.++.+..
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~ 185 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL 185 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 467999999999999999999999999999999887765544
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.032 Score=46.51 Aligned_cols=72 Identities=24% Similarity=0.347 Sum_probs=49.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
|++|+|+|++ |+|...++.....|++|++.+|++++++...+ +.. +.. .|.++.+..+++.+ ..
T Consensus 167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lGA---d~~---i~~~~~~~~~~~~~--------~~ 230 (339)
T COG1064 167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGA---DHV---INSSDSDALEAVKE--------IA 230 (339)
T ss_pred CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hCC---cEE---EEcCCchhhHHhHh--------hC
Confidence 7899999999 99998888777799999999999998764443 211 122 33334444333322 14
Q ss_pred cEEEecCC
Q 027816 97 NILVNNVG 104 (218)
Q Consensus 97 d~vv~~ag 104 (218)
|+++..++
T Consensus 231 d~ii~tv~ 238 (339)
T COG1064 231 DAIIDTVG 238 (339)
T ss_pred cEEEECCC
Confidence 88888766
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.1 Score=45.30 Aligned_cols=111 Identities=16% Similarity=0.166 Sum_probs=66.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhC---C----CeEEEecC--ChhhHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGL---G----AVVHTCSR--NEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~---G----~~V~~~~r--~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~ 84 (218)
-+|+||||+|-||.++.-+++.- | ..+++++. +.+.++...-++.+.. ..+... .| +.++
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~--~~ea---- 196 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD--LDVA---- 196 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC--CHHH----
Confidence 47999999999999999999872 3 24777887 5777776666665432 112211 22 2222
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC--CeEEEEe
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV--GSIVFIS 153 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~--~~iv~~s 153 (218)
+ ...|++|..+|.... ...+..+ .++.|. .+++...+.+.+... .+|+++.
T Consensus 197 ~--------~daDvvIitag~prk---~G~~R~D---LL~~N~----~Ifk~~g~~I~~~a~~~~~VlVv~ 249 (452)
T cd05295 197 F--------KDAHVIVLLDDFLIK---EGEDLEG---CIRSRV----AICQLYGPLIEKNAKEDVKVIVAG 249 (452)
T ss_pred h--------CCCCEEEECCCCCCC---cCCCHHH---HHHHHH----HHHHHHHHHHHHhCCCCCeEEEEe
Confidence 1 356999999997422 2234333 344554 344555555555543 4555554
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0048 Score=42.39 Aligned_cols=38 Identities=32% Similarity=0.355 Sum_probs=32.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
++++||+++|.|+ |.+|..-++.|++.|++|.++++..
T Consensus 3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 4678999999998 8999999999999999999999886
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.025 Score=44.56 Aligned_cols=75 Identities=21% Similarity=0.294 Sum_probs=54.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+.|++||=.||+|| -++..+++.|++|...+-+++..+....+....+..+.+.+.+ .+++.+. +
T Consensus 57 ~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~----------~edl~~~-~ 122 (243)
T COG2227 57 DLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQAT----------VEDLASA-G 122 (243)
T ss_pred CCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhhh----------HHHHHhc-C
Confidence 378999999999999 5888899999999999999998877666655555444443333 2222222 2
Q ss_pred CcccEEEec
Q 027816 94 GKLNILVNN 102 (218)
Q Consensus 94 ~~id~vv~~ 102 (218)
++.|+|++.
T Consensus 123 ~~FDvV~cm 131 (243)
T COG2227 123 GQFDVVTCM 131 (243)
T ss_pred CCccEEEEh
Confidence 578999877
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.029 Score=48.76 Aligned_cols=78 Identities=14% Similarity=0.063 Sum_probs=57.7
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
...++++|.|+ |.+|+.+++.|.+.|.+|++++++++..+...++. ..+..+..|.++.+.+++.-- .
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----~~~~~i~gd~~~~~~L~~~~~-------~ 296 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----PNTLVLHGDGTDQELLEEEGI-------D 296 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----CCCeEEECCCCCHHHHHhcCC-------c
Confidence 34678999999 99999999999999999999999988766554432 235567889988877654321 2
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
..|.++...+
T Consensus 297 ~a~~vi~~~~ 306 (453)
T PRK09496 297 EADAFIALTN 306 (453)
T ss_pred cCCEEEECCC
Confidence 4577775543
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.062 Score=41.57 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=32.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.++.++|+|.|+ ||+|..++..|++.|. ++++++++
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 456789999998 7899999999999998 79999887
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.017 Score=43.92 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=34.1
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
+|.|.|+ |.+|+.+|..++..|++|.+.+++++.++...+.+
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i 42 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRI 42 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence 4678887 99999999999999999999999999876655444
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.15 Score=41.97 Aligned_cols=110 Identities=15% Similarity=0.103 Sum_probs=66.2
Q ss_pred EEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCC---eEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 20 ALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+.|.|+ |++|..++..++..| .++++++++++.......++.+... ......+ .+.++ + .
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~-------l-----~ 65 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYAD-------A-----A 65 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHH-------h-----C
Confidence 357887 679999999999999 5899999999887776666654321 1111111 12222 2 3
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
.-|++|.++|.... ...+..+ .+..|. .+++.+.+.+++. +.+.++++|.
T Consensus 66 ~aDiVIitag~p~~---~~~~R~~---l~~~n~----~i~~~~~~~i~~~~p~~~viv~sN 116 (300)
T cd00300 66 DADIVVITAGAPRK---PGETRLD---LINRNA----PILRSVITNLKKYGPDAIILVVSN 116 (300)
T ss_pred CCCEEEEcCCCCCC---CCCCHHH---HHHHHH----HHHHHHHHHHHHhCCCeEEEEccC
Confidence 46999999997432 1233332 233443 3445555555544 4466677775
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.2 Score=41.41 Aligned_cols=111 Identities=16% Similarity=0.202 Sum_probs=68.2
Q ss_pred EEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC-----CeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 20 ALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG-----FVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
|.|.|+ |.+|..+|..++.+|. ++++.+.+++..+....++.+.. ..+.... .+.++ +
T Consensus 2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~-------~---- 66 (307)
T cd05290 2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDD-------C---- 66 (307)
T ss_pred EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHH-------h----
Confidence 578898 9999999999999884 79999999888776666665431 1222222 23332 2
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss 154 (218)
..-|+||..||.... + ..+.+. .+.++.| ..+++...+.+.+.. .+.++++|.
T Consensus 67 -~~aDivvitaG~~~k-p--g~tr~R-~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvsN 120 (307)
T cd05290 67 -ADADIIVITAGPSID-P--GNTDDR-LDLAQTN----AKIIREIMGNITKVTKEAVIILITN 120 (307)
T ss_pred -CCCCEEEECCCCCCC-C--CCCchH-HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecC
Confidence 346999999997421 1 223101 1223344 455566666666554 345566665
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.067 Score=42.23 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=29.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSR 49 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r 49 (218)
.+++++|+|.| .||+|.++++.|+..|. ++.+++.
T Consensus 18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45678999998 57999999999999997 7888764
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.013 Score=43.70 Aligned_cols=47 Identities=23% Similarity=0.349 Sum_probs=36.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
..+++||+++|.|.+.-+|+-++..|.++|+.|.++....+.+++..
T Consensus 31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~ 77 (160)
T PF02882_consen 31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT 77 (160)
T ss_dssp T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH
T ss_pred CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee
Confidence 45789999999999999999999999999999999887766555443
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.07 Score=37.91 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=52.3
Q ss_pred EEEEecCCCchHHHHHHHHHh-CCCeEEE-ecCCh----------------------hhHHHHHHHhhhCCCeEEEEEee
Q 027816 19 TALVTGGTRGIGQATVEELAG-LGAVVHT-CSRNE----------------------VELNKCLKEWQSKGFVVSGSVCD 74 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~-~G~~V~~-~~r~~----------------------~~~~~~~~~~~~~~~~v~~~~~D 74 (218)
+|.|.|++|-+|+.+++.+.+ .+.+++. ++|+. ..++...+. .+ +..|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID 73 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID 73 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence 689999999999999999999 5677544 55655 122222221 22 3479
Q ss_pred CCCHHHHHHHHHHHHhhcCCcccEEEecCCC
Q 027816 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGT 105 (218)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~ 105 (218)
.+.++.+.+.++.+.++ .+.+|+-..|+
T Consensus 74 fT~p~~~~~~~~~~~~~---g~~~ViGTTG~ 101 (124)
T PF01113_consen 74 FTNPDAVYDNLEYALKH---GVPLVIGTTGF 101 (124)
T ss_dssp ES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred cCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence 99999999999888876 46778877774
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.46 Score=38.12 Aligned_cols=144 Identities=19% Similarity=0.211 Sum_probs=87.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc-CC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF-NG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-~~ 94 (218)
.|-+|||--|.||.|..++..+-..|++++.+..+.++.+...+. +. -+ ..|-+..+-++ ++.+.. |.
T Consensus 146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken----G~-~h--~I~y~~eD~v~----~V~kiTngK 214 (336)
T KOG1197|consen 146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN----GA-EH--PIDYSTEDYVD----EVKKITNGK 214 (336)
T ss_pred CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc----CC-cc--eeeccchhHHH----HHHhccCCC
Confidence 467999999999999999999999999999999988887665543 11 11 23444444333 333322 33
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC------------
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG------------ 162 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~------------ 162 (218)
.+|+++-..|. +.+ .+.+.++ + +.|.+|..+...+..+..
T Consensus 215 GVd~vyDsvG~-----------dt~--------~~sl~~L-------k--~~G~mVSfG~asgl~~p~~l~~ls~k~l~l 266 (336)
T KOG1197|consen 215 GVDAVYDSVGK-----------DTF--------AKSLAAL-------K--PMGKMVSFGNASGLIDPIPLNQLSPKALQL 266 (336)
T ss_pred Cceeeeccccc-----------hhh--------HHHHHHh-------c--cCceEEEeccccCCCCCeehhhcChhhhhh
Confidence 68998887773 111 1111111 2 246788777666555422
Q ss_pred ---CCchhhhhHHHHHHHHHHHHHHhccC--CeEEEEeecc
Q 027816 163 ---SGSIYGATKAAMNQLTRNLACEWAKD--NIRTNSVAPW 198 (218)
Q Consensus 163 ---~~~~Y~~sK~a~~~~~~~l~~e~~~~--gv~v~~v~PG 198 (218)
..-.|-....-+..++-.+-.+..+. +++++.+.|=
T Consensus 267 vrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl 307 (336)
T KOG1197|consen 267 VRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL 307 (336)
T ss_pred ccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence 22335555555555555554554333 6788888873
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.078 Score=40.06 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=27.5
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE 51 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~ 51 (218)
+|+|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3678885 8999999999999998 699998764
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.075 Score=41.05 Aligned_cols=36 Identities=17% Similarity=0.338 Sum_probs=30.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++.+|+|.|++| +|.++++.|+..|. ++.+++.+
T Consensus 16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence 35677899998776 99999999999997 68888754
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.028 Score=46.93 Aligned_cols=75 Identities=19% Similarity=0.270 Sum_probs=49.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++|+|+|+ |++|...+..+...|+ +|+++++++++++.. +++.. .. ..|..+ +++.+ ..+.. +
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa---~~---vi~~~~-~~~~~----~~~~~-g 234 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGA---DK---LVNPQN-DDLDH----YKAEK-G 234 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCC---cE---EecCCc-ccHHH----HhccC-C
Confidence 5789999986 8999999888878898 688899888776543 33321 11 123332 22222 22222 4
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
.+|+++.+.|
T Consensus 235 ~~D~vid~~G 244 (343)
T PRK09880 235 YFDVSFEVSG 244 (343)
T ss_pred CCCEEEECCC
Confidence 5899999988
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.081 Score=44.68 Aligned_cols=36 Identities=28% Similarity=0.405 Sum_probs=31.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 467789999988 8999999999999997 78888764
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.031 Score=44.04 Aligned_cols=74 Identities=23% Similarity=0.350 Sum_probs=55.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHH-HHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKL-IQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~-~~~~~~~~~~~i 96 (218)
|.++|.|+ |-+|+.+|+.|.++|++|++++++++..++..++ ....+.+..|.++.+.++++ ++ ..
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi~--------~a 67 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGID--------DA 67 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCCC--------cC
Confidence 35566664 6789999999999999999999999987764432 12477888999998887665 22 44
Q ss_pred cEEEecCC
Q 027816 97 NILVNNVG 104 (218)
Q Consensus 97 d~vv~~ag 104 (218)
|+++...|
T Consensus 68 D~vva~t~ 75 (225)
T COG0569 68 DAVVAATG 75 (225)
T ss_pred CEEEEeeC
Confidence 77776655
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.018 Score=47.04 Aligned_cols=43 Identities=26% Similarity=0.354 Sum_probs=37.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL 54 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~ 54 (218)
..+++||+++|.|+++-.|+.++..|.++|++|.++.|..+.+
T Consensus 154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L 196 (283)
T PRK14192 154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL 196 (283)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH
Confidence 3578999999999999999999999999999999988754433
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.019 Score=47.12 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=40.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
..+++||.|.|.|.++-+|+.++..|.++|+.|.++.+....+++..
T Consensus 154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~ 200 (301)
T PRK14194 154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALC 200 (301)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHH
Confidence 35789999999999999999999999999999999977665544443
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.085 Score=38.27 Aligned_cols=31 Identities=23% Similarity=0.312 Sum_probs=26.9
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
+|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 3788887 8999999999999998 78888754
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.054 Score=45.01 Aligned_cols=78 Identities=19% Similarity=0.219 Sum_probs=50.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+++|+|+ |++|..++..+...|++ |+++++++++.+.. +++.. .. ..|..+.+ .+++.+.. . +.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga---~~---~i~~~~~~-~~~~~~~~-~--~~ 230 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGA---DF---VINSGQDD-VQEIRELT-S--GA 230 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCC---CE---EEcCCcch-HHHHHHHh-C--CC
Confidence 4789999986 89999999888889998 99998888776544 33321 11 12333333 33322221 1 12
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.+.|.
T Consensus 231 ~~d~vid~~g~ 241 (339)
T cd08239 231 GADVAIECSGN 241 (339)
T ss_pred CCCEEEECCCC
Confidence 58999988773
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.031 Score=39.96 Aligned_cols=84 Identities=15% Similarity=0.166 Sum_probs=50.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhh----------CCCeEEEEEeeCCCHHHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQS----------KGFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~----------~~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
.+|-|.|+ |-.|.++++.|.+.|++|..+ +|+.+..+.....+.. ...++..+. +.| +.+.++.+
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~ia--vpD-daI~~va~ 86 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIA--VPD-DAIAEVAE 86 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE---S-C-CHHHHHHH
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEE--ech-HHHHHHHH
Confidence 47888888 889999999999999988776 5666555544333311 122333332 332 47888888
Q ss_pred HHHhh--cCCcccEEEecCCCC
Q 027816 87 EVGSK--FNGKLNILVNNVGTN 106 (218)
Q Consensus 87 ~~~~~--~~~~id~vv~~ag~~ 106 (218)
++... + .+=.+|+|+.|..
T Consensus 87 ~La~~~~~-~~g~iVvHtSGa~ 107 (127)
T PF10727_consen 87 QLAQYGAW-RPGQIVVHTSGAL 107 (127)
T ss_dssp HHHCC--S--TT-EEEES-SS-
T ss_pred HHHHhccC-CCCcEEEECCCCC
Confidence 88765 2 1225899998853
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.014 Score=45.16 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=34.6
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.++++||.|+|.|| |.+|...++.|.+.|++|.++++..
T Consensus 5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 35788999999998 8899999999999999999998754
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.073 Score=43.63 Aligned_cols=79 Identities=22% Similarity=0.342 Sum_probs=52.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+.+++|+|+++++|..++..+...|++|+.+.++.+..+.. +++. ... ..|..+.+..+.+.+.. . +..
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g---~~~---~~~~~~~~~~~~~~~~~-~--~~~ 211 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALG---ADV---AVDYTRPDWPDQVREAL-G--GGG 211 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcC---CCE---EEecCCccHHHHHHHHc-C--CCC
Confidence 467899999999999999999999999999999888765544 3332 111 12333333333322221 1 125
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 212 ~d~vl~~~g 220 (324)
T cd08244 212 VTVVLDGVG 220 (324)
T ss_pred ceEEEECCC
Confidence 899999876
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.79 Score=37.76 Aligned_cols=42 Identities=14% Similarity=-0.046 Sum_probs=34.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~ 60 (218)
++|.|.|+ |.+|..++..++..|. +|++.+++++..+....+
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~d 45 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALD 45 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHH
Confidence 47889998 8999999999999875 999999988776544333
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.14 Score=36.80 Aligned_cols=78 Identities=17% Similarity=0.295 Sum_probs=49.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC-------------------hhhHHHHHHHhhh--CCCeEEEEEee
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN-------------------EVELNKCLKEWQS--KGFVVSGSVCD 74 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~--~~~~v~~~~~D 74 (218)
+++|+|.|+ |++|..+++.|+..|. ++.+++.+ ..+.+...+.+.. ...++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 568888875 7899999999999998 78888753 1122333334432 24566666666
Q ss_pred CCCHHHHHHHHHHHHhhcCCcccEEEecCC
Q 027816 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (218)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~id~vv~~ag 104 (218)
+ +.+...++++ ..|+||.+..
T Consensus 81 ~-~~~~~~~~~~--------~~d~vi~~~d 101 (135)
T PF00899_consen 81 I-DEENIEELLK--------DYDIVIDCVD 101 (135)
T ss_dssp C-SHHHHHHHHH--------TSSEEEEESS
T ss_pred c-cccccccccc--------CCCEEEEecC
Confidence 6 3444444442 3588888744
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.026 Score=45.82 Aligned_cols=44 Identities=18% Similarity=0.227 Sum_probs=37.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 61 (218)
+|+++|.|+ ||-+++++..|++.|+ +|.+++|+.++.+.+.+.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 468899986 8999999999999997 6999999998877766543
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.14 Score=42.89 Aligned_cols=40 Identities=30% Similarity=0.400 Sum_probs=35.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
..++||++.|.|. |.||+.+|+.|...|.+|++.+|+.+.
T Consensus 142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 3678999999986 679999999999999999999988654
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.22 Score=43.73 Aligned_cols=40 Identities=25% Similarity=0.228 Sum_probs=34.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL 54 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~ 54 (218)
.+++|+|+|.| .|+.|+++++.|.+.|+.|.+.+++....
T Consensus 12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~~ 51 (473)
T PRK00141 12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETAR 51 (473)
T ss_pred cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHHH
Confidence 45788899998 77899999999999999999999875543
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.068 Score=43.86 Aligned_cols=79 Identities=15% Similarity=0.239 Sum_probs=51.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+++|.|+++++|..++..+...|++|+.+.++.+..+...+ + +... ..+..+. +..+.+.+... +..
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~-~~~~~i~~~~~--~~~ 208 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIGP---VVSTEQP-GWQDKVREAAG--GAP 208 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCCE---EEcCCCc-hHHHHHHHHhC--CCC
Confidence 46899999999999999999998999999998888877655433 2 1111 1122222 22222222222 125
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 209 ~d~v~d~~g 217 (324)
T cd08292 209 ISVALDSVG 217 (324)
T ss_pred CcEEEECCC
Confidence 899998877
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.035 Score=45.22 Aligned_cols=45 Identities=20% Similarity=0.334 Sum_probs=38.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
..+++||.|+|.|.|.-.|+-++..|.++|+.|.++......+.+
T Consensus 152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~ 196 (285)
T PRK14191 152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSF 196 (285)
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHH
Confidence 357889999999999999999999999999999888655544443
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.15 Score=40.62 Aligned_cols=36 Identities=28% Similarity=0.359 Sum_probs=30.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 456778898875 6999999999999997 78888764
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.34 Score=37.95 Aligned_cols=75 Identities=17% Similarity=0.074 Sum_probs=49.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+.++|-.|+++|. ++..+++.|. +|+.++.+++..+...+.+...+..+..+..|+.+. + . .+.
T Consensus 37 ~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~----~--~~~ 101 (223)
T PRK14967 37 GRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------V----E--FRP 101 (223)
T ss_pred CCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------c----c--CCC
Confidence 5689999998755 3344555566 899999999887766665544444566666664321 1 1 146
Q ss_pred ccEEEecCCCC
Q 027816 96 LNILVNNVGTN 106 (218)
Q Consensus 96 id~vv~~ag~~ 106 (218)
.|.|+.|..+.
T Consensus 102 fD~Vi~npPy~ 112 (223)
T PRK14967 102 FDVVVSNPPYV 112 (223)
T ss_pred eeEEEECCCCC
Confidence 79999998754
|
|
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.12 Score=42.07 Aligned_cols=88 Identities=25% Similarity=0.330 Sum_probs=57.6
Q ss_pred CCcEEEEecCCCchHHH--HHHHHHhCCCeEEEec--CChhh--------H--HHHHHHhhhCCCeEEEEEeeCCCHHHH
Q 027816 16 KGMTALVTGGTRGIGQA--TVEELAGLGAVVHTCS--RNEVE--------L--NKCLKEWQSKGFVVSGSVCDAASPDQR 81 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~--la~~l~~~G~~V~~~~--r~~~~--------~--~~~~~~~~~~~~~v~~~~~D~~~~~~~ 81 (218)
-.|+|||.|+|+|.|.+ |+..|- -|++-+.+. |.... . ..+.+.....+-...-+..|.-+.+--
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k 118 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK 118 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence 34899999999999987 444444 556433331 21110 0 112222234455556677888888888
Q ss_pred HHHHHHHHhhcCCcccEEEecCCC
Q 027816 82 EKLIQEVGSKFNGKLNILVNNVGT 105 (218)
Q Consensus 82 ~~~~~~~~~~~~~~id~vv~~ag~ 105 (218)
++.++.+++.+ |.+|.+|++-+.
T Consensus 119 ~kvIe~Ik~~~-g~vDlvvYSlAs 141 (398)
T COG3007 119 QKVIEAIKQDF-GKVDLVVYSLAS 141 (398)
T ss_pred HHHHHHHHHhh-ccccEEEEeccC
Confidence 88999999999 699999988653
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.1 Score=44.13 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=50.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|.+++|+|+ |+||...+..+...|+ +|+.+++++++++.. +++.. .. ..|..+ .+++.+.+.++. +
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga---~~---~i~~~~~~~~~~~~v~~~~---~ 253 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGA---TD---CVNPNDYDKPIQEVIVEIT---D 253 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCC---Ce---EEcccccchhHHHHHHHHh---C
Confidence 4789999986 8999999888888898 799999988876654 33321 11 123322 223333333322 2
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.+.|.
T Consensus 254 ~g~d~vid~~G~ 265 (368)
T TIGR02818 254 GGVDYSFECIGN 265 (368)
T ss_pred CCCCEEEECCCC
Confidence 358999999873
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.041 Score=46.33 Aligned_cols=38 Identities=24% Similarity=0.262 Sum_probs=34.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.++.||++.|.|. |.||+.+|+.+..-|.+|+..+|+.
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 3688999999987 8999999999999999999999874
|
|
| >COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.45 Score=36.30 Aligned_cols=94 Identities=21% Similarity=0.106 Sum_probs=66.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
-+++||+|+=.||+.|+ ++...+-.|+ .|+.++.+.+..+-..++.......+.++.+|+++..
T Consensus 42 g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~------------ 106 (198)
T COG2263 42 GDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSDFR------------ 106 (198)
T ss_pred CCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhhcC------------
Confidence 35789999999998776 2233344675 7999999999988887777666778999999976432
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~ 125 (218)
++.|.++-|..+...... .+..-+++.+++
T Consensus 107 --~~~dtvimNPPFG~~~rh--aDr~Fl~~Ale~ 136 (198)
T COG2263 107 --GKFDTVIMNPPFGSQRRH--ADRPFLLKALEI 136 (198)
T ss_pred --CccceEEECCCCcccccc--CCHHHHHHHHHh
Confidence 578999999877654322 344444444444
|
|
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.034 Score=40.86 Aligned_cols=40 Identities=20% Similarity=0.191 Sum_probs=33.1
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
|+.+|+++-+|++||..|.++|.+|+.. +.+..+.+..++
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~ 40 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA 40 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence 5789999999999999999999999888 555555555554
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.11 Score=43.44 Aligned_cols=40 Identities=28% Similarity=0.340 Sum_probs=35.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
.+++||++.|.|. |.||+.+|+.+...|.+|+..+|+...
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~ 185 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP 185 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence 3688999999998 999999999999999999999987543
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.08 Score=39.44 Aligned_cols=83 Identities=14% Similarity=0.093 Sum_probs=52.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh-------hCCCeEEEEEeeCCCHHHHHHHHHH--H
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-------SKGFVVSGSVCDAASPDQREKLIQE--V 88 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~v~~~~~D~~~~~~~~~~~~~--~ 88 (218)
++|-+.|. |-+|..+|++|+++|++|.+.+|++++.+.+.+.-- +.-.....+..=+.+.+.+++++.. +
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 46677776 799999999999999999999999988776553310 0001123333446778888888877 5
Q ss_pred HhhcCCcccEEEec
Q 027816 89 GSKFNGKLNILVNN 102 (218)
Q Consensus 89 ~~~~~~~id~vv~~ 102 (218)
.... .+=.++|.+
T Consensus 81 ~~~l-~~g~iiid~ 93 (163)
T PF03446_consen 81 LAGL-RPGKIIIDM 93 (163)
T ss_dssp GGGS--TTEEEEE-
T ss_pred hhcc-ccceEEEec
Confidence 5544 122444444
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >TIGR00537 hemK_rel_arch HemK-related putative methylase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.59 Score=35.17 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=53.7
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
..+++++=.|++.|. ++..+++.|.+|+.++.+++..+...+.+...+..+..+..|..+.. .+
T Consensus 18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-------------~~ 81 (179)
T TIGR00537 18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV-------------RG 81 (179)
T ss_pred cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc-------------CC
Confidence 345788999988775 44456667779999999998887777766555556777777754321 13
Q ss_pred cccEEEecCCCC
Q 027816 95 KLNILVNNVGTN 106 (218)
Q Consensus 95 ~id~vv~~ag~~ 106 (218)
..|.|+.|..+.
T Consensus 82 ~fD~Vi~n~p~~ 93 (179)
T TIGR00537 82 KFDVILFNPPYL 93 (179)
T ss_pred cccEEEECCCCC
Confidence 679999997654
|
The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes. |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.13 Score=41.97 Aligned_cols=42 Identities=31% Similarity=0.426 Sum_probs=36.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.|.+++|.|+++++|..++......|++|+.+.+++++.+..
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 183 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL 183 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 468999999999999999999989999999998887765444
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.12 Score=42.59 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=50.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+++|.|+++.+|..++......|++|+.+.++.+..+.. +.+.. ..+ .|..+ .+..+.+.... +..
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~--~~v----~~~~~-~~~~~~~~~~~---~~~ 207 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGC--DRP----INYKT-EDLGEVLKKEY---PKG 207 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCC--ceE----EeCCC-ccHHHHHHHhc---CCC
Confidence 467999999999999999888888999999988887765544 33321 111 22222 22222333221 235
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|.++.+.|
T Consensus 208 vd~v~~~~g 216 (329)
T cd08250 208 VDVVYESVG 216 (329)
T ss_pred CeEEEECCc
Confidence 899998766
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.12 Score=44.32 Aligned_cols=44 Identities=14% Similarity=0.216 Sum_probs=34.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC---eEEEecCChhhHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVELNKCLK 59 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~ 59 (218)
.|.+++|.|++|++|...+..+...|+ +|+++++++++++...+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~ 221 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR 221 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence 367899999999999998776666553 79999999888765544
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.089 Score=41.37 Aligned_cols=34 Identities=26% Similarity=0.335 Sum_probs=29.7
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
...+.|++|.+|+.++.++...|+.|+-++|+..
T Consensus 4 k~~vfgg~gflg~~ic~~a~~sgy~vvsvsrsga 37 (283)
T KOG4288|consen 4 KLIVFGGNGFLGKRICQEAVTSGYQVVSVSRSGA 37 (283)
T ss_pred cceeecccccchhhhhHHHHhcCceEEEeccccC
Confidence 4567899999999999999999999998887644
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.13 Score=43.49 Aligned_cols=78 Identities=17% Similarity=0.257 Sum_probs=51.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCH-HHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~~ 93 (218)
.|.+++|.|+ |++|...+..+...|+ +|+.+++++++.+.. +++.. .. ..|..+. +++.+.+.+...
T Consensus 186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa---~~---~i~~~~~~~~~~~~v~~~~~--- 254 (368)
T cd08300 186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGA---TD---CVNPKDHDKPIQQVLVEMTD--- 254 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCC---CE---EEcccccchHHHHHHHHHhC---
Confidence 4789999985 8999999888888999 699999988876644 33321 11 1233332 234444443322
Q ss_pred CcccEEEecCC
Q 027816 94 GKLNILVNNVG 104 (218)
Q Consensus 94 ~~id~vv~~ag 104 (218)
+.+|+++.+.|
T Consensus 255 ~g~d~vid~~g 265 (368)
T cd08300 255 GGVDYTFECIG 265 (368)
T ss_pred CCCcEEEECCC
Confidence 36899999877
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.25 Score=38.62 Aligned_cols=59 Identities=15% Similarity=0.056 Sum_probs=42.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-------------CCCeEEEEEeeCCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-------------KGFVVSGSVCDAAS 77 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------------~~~~v~~~~~D~~~ 77 (218)
.+.+||+.||+.| .=+..|+++|++|+.++.++...+.+.++..- ....+....+|+.+
T Consensus 34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 105 (213)
T TIGR03840 34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA 105 (213)
T ss_pred CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCC
Confidence 4569999999887 45667889999999999999988765332110 12356667777754
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.12 Score=43.68 Aligned_cols=78 Identities=23% Similarity=0.326 Sum_probs=49.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|.|+ |++|..++..+...|+ +|+.+++++++++-. +++.. .. ..|..+.+..+ ++.+..++
T Consensus 191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga---~~---~i~~~~~~~~~----~i~~~~~~ 258 (371)
T cd08281 191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGA---TA---TVNAGDPNAVE----QVRELTGG 258 (371)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCC---ce---EeCCCchhHHH----HHHHHhCC
Confidence 4679999985 8999998888878899 698898888776543 33321 11 12333322222 22222223
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.+.|.
T Consensus 259 g~d~vid~~G~ 269 (371)
T cd08281 259 GVDYAFEMAGS 269 (371)
T ss_pred CCCEEEECCCC
Confidence 68999998873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.036 Score=48.17 Aligned_cols=39 Identities=26% Similarity=0.298 Sum_probs=34.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
+++.|.||.|.+|.++++.|.+.|.+|.+.+|+.+...+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~ 39 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE 39 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence 368999999999999999999999999999998776543
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.17 Score=42.34 Aligned_cols=41 Identities=27% Similarity=0.393 Sum_probs=35.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.|.+++|.|+ |++|..++..+...|++|+++++++++++..
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 4789999999 9999999888888999999999988876544
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.041 Score=44.86 Aligned_cols=46 Identities=26% Similarity=0.382 Sum_probs=38.8
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
..+++||+++|.|.|.-+|+-++..|.++|+.|.++.+....+.+.
T Consensus 153 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~ 198 (285)
T PRK14189 153 GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAH 198 (285)
T ss_pred CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHH
Confidence 3578999999999999999999999999999999887655544433
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.12 Score=42.19 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=30.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++.+|+|.|+ ||+|..++..|+..|. ++.+++.+
T Consensus 24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 466788999986 5899999999999997 78888765
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.14 Score=42.50 Aligned_cols=31 Identities=29% Similarity=0.429 Sum_probs=26.7
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
+|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D 32 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD 32 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 3788886 8999999999999997 78888764
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.12 Score=43.83 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=51.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCH-HHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~~ 93 (218)
.|++|+|.|+ |++|..++..+...|+ +|+.+++++++++.. +++.. .. ..|..+. +++.+.+.++. +
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga---~~---~i~~~~~~~~~~~~v~~~~---~ 266 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGI---TD---FINPKDSDKPVHERIREMT---G 266 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCC---cE---EEecccccchHHHHHHHHh---C
Confidence 4789999986 9999999988888998 699999988776554 33321 11 1233322 22333333332 2
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.+.|.
T Consensus 267 ~g~dvvid~~G~ 278 (381)
T PLN02740 267 GGVDYSFECAGN 278 (381)
T ss_pred CCCCEEEECCCC
Confidence 358999999883
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.097 Score=43.41 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=31.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.|++++|.|+++++|..++..+...|++|+.+.++.
T Consensus 146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~ 181 (341)
T cd08290 146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDR 181 (341)
T ss_pred CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 578999999999999999999999999888877765
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.048 Score=45.64 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=28.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC---eEEEecCChh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEV 52 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r~~~ 52 (218)
++|.|.||+|.+|+++++.|.++|+ ++..+.+..+
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS 39 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence 5789999999999999999999875 4555655443
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.11 Score=42.22 Aligned_cols=42 Identities=36% Similarity=0.465 Sum_probs=36.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.|..++|+|+++++|..++..+...|++|+.+.++.+..+..
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA 180 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence 467999999999999999999999999999998887665544
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.17 Score=39.23 Aligned_cols=39 Identities=23% Similarity=0.292 Sum_probs=33.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
++++||+|+|.|| |.+|..-++.|++.|++|.+++....
T Consensus 5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~ 43 (205)
T TIGR01470 5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE 43 (205)
T ss_pred EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 4678999999985 67889999999999999999987654
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.57 Score=38.62 Aligned_cols=107 Identities=13% Similarity=0.112 Sum_probs=65.0
Q ss_pred EecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 22 VTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 22 ItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
|.|+ |.+|..+|..++.++. ++++.+.+++.++....++.+.. ..+... ..+.++ + ..
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~~~-------~-----~d 64 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDYSD-------C-----KD 64 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCHHH-------H-----CC
Confidence 3454 8899999999998884 79999999888777777765532 112211 122222 2 34
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
-|+||..||.... ...+..+ .++.|..-. +...+.+.+. +.+.++++|.
T Consensus 65 aDivVitag~~rk---~g~~R~d---ll~~N~~i~----~~~~~~i~~~~p~~~vivvsN 114 (299)
T TIGR01771 65 ADLVVITAGAPQK---PGETRLE---LVGRNVRIM----KSIVPEVVKSGFDGIFLVATN 114 (299)
T ss_pred CCEEEECCCCCCC---CCCCHHH---HHHHHHHHH----HHHHHHHHHhCCCeEEEEeCC
Confidence 6999999997421 2334333 344554444 4444444444 4456777775
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.048 Score=44.74 Aligned_cols=39 Identities=26% Similarity=0.375 Sum_probs=35.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec-CCh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNE 51 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~-r~~ 51 (218)
.+++||+|+|.|-++-+|+.+|..|+++|+.|.++. |+.
T Consensus 154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 478999999999999999999999999999999995 554
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.055 Score=44.08 Aligned_cols=47 Identities=26% Similarity=0.368 Sum_probs=40.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
..+++||.++|.|-|.-+|+-++..|.++|+.|.++.+....+++..
T Consensus 154 ~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~~~ 200 (285)
T PRK10792 154 GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRHHV 200 (285)
T ss_pred CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHHHH
Confidence 35788999999999999999999999999999999987665554433
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.19 Score=40.71 Aligned_cols=42 Identities=26% Similarity=0.280 Sum_probs=36.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.|.+++|.|+++++|..++..+...|++|+.+.++.++.+..
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 177 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA 177 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 478999999999999999999889999999998887765544
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.065 Score=35.90 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=32.1
Q ss_pred CCCchHHHHHHHHHhCC---CeEEEe-cCChhhHHHHHHHh
Q 027816 25 GTRGIGQATVEELAGLG---AVVHTC-SRNEVELNKCLKEW 61 (218)
Q Consensus 25 a~~giG~~la~~l~~~G---~~V~~~-~r~~~~~~~~~~~~ 61 (218)
|+|.+|.++++.|++.| .+|.+. +|++++.++..++.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 78999999999999999 788855 99999888777664
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.15 Score=41.72 Aligned_cols=79 Identities=15% Similarity=0.240 Sum_probs=51.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+++|.|+++++|..++..+...|++|+.+.++.++.+.. +++. .. ...|..+.+..++ +.+... +..
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g---~~---~~~~~~~~~~~~~-~~~~~~--~~~ 207 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALG---AD---EVIDSSPEDLAQR-VKEATG--GAG 207 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcC---CC---EEecccchhHHHH-HHHHhc--CCC
Confidence 467999999999999999999999999999888888765544 3321 11 1123222222222 222211 135
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|.++.+.|
T Consensus 208 ~d~vl~~~g 216 (323)
T cd05282 208 ARLALDAVG 216 (323)
T ss_pred ceEEEECCC
Confidence 899998876
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.2 Score=41.19 Aligned_cols=42 Identities=26% Similarity=0.507 Sum_probs=35.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.|.+++|.|+++++|..++..+...|+.++.+.++.+..+.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 181 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC 181 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467999999999999999999999999888888887765544
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.19 Score=41.53 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=46.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++++++||+|++|..++......|++|+.+.+++++.+...+ + +.... .|..+.+-.++ +.+... +..+|
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~---g~~~~---i~~~~~~~~~~-v~~~~~--~~~~d 214 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I---GAEYV---LNSSDPDFLED-LKELIA--KLNAT 214 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCcEE---EECCCccHHHH-HHHHhC--CCCCc
Confidence 455555999999999887777789999999888876654432 2 11111 22222222222 222211 12589
Q ss_pred EEEecCC
Q 027816 98 ILVNNVG 104 (218)
Q Consensus 98 ~vv~~ag 104 (218)
+++.+.|
T Consensus 215 ~vid~~g 221 (324)
T cd08291 215 IFFDAVG 221 (324)
T ss_pred EEEECCC
Confidence 9998877
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.11 Score=43.47 Aligned_cols=73 Identities=19% Similarity=0.283 Sum_probs=46.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC---hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.|++|+|+|+ |++|...+..+...|++|++++|+ +++++ ..+++ +... +|..+ +++.+ . ...
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~---Ga~~----v~~~~-~~~~~-~----~~~ 236 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL---GATY----VNSSK-TPVAE-V----KLV 236 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc---CCEE----ecCCc-cchhh-h----hhc
Confidence 5789999986 999999987777889999999884 44433 33333 2221 23222 22222 1 111
Q ss_pred CCcccEEEecCC
Q 027816 93 NGKLNILVNNVG 104 (218)
Q Consensus 93 ~~~id~vv~~ag 104 (218)
+.+|+++.+.|
T Consensus 237 -~~~d~vid~~g 247 (355)
T cd08230 237 -GEFDLIIEATG 247 (355)
T ss_pred -CCCCEEEECcC
Confidence 46899999987
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.3 Score=41.53 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=30.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 456788999986 6999999999999997 78888764
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.063 Score=46.33 Aligned_cols=41 Identities=24% Similarity=0.362 Sum_probs=36.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL 54 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~ 54 (218)
..+.||+++|.|. |.||+.++..+...|++|+++++++.+.
T Consensus 208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra 248 (425)
T PRK05476 208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA 248 (425)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence 3568999999997 6899999999999999999999887654
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.069 Score=43.38 Aligned_cols=45 Identities=22% Similarity=0.320 Sum_probs=38.1
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
..+++||.++|.|.|.-+|+-++..|.++|+.|.++....+.+.+
T Consensus 152 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~ 196 (281)
T PRK14183 152 EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKA 196 (281)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 457899999999999999999999999999999888655544443
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.066 Score=44.24 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=33.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
++|.|.| .|-+|.++|..|+++|++|++.+|+++..+..
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~ 41 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAA 41 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHH
Confidence 3688898 77899999999999999999999998766554
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.35 Score=37.21 Aligned_cols=74 Identities=19% Similarity=0.188 Sum_probs=49.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.+++||-.||+.|. .+..|+++|++|+.++.+++..+...+.....+ ..+.....|+.+.. +.+
T Consensus 30 ~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~------------~~~ 94 (197)
T PRK11207 30 KPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT------------FDG 94 (197)
T ss_pred CCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC------------cCC
Confidence 45789999998876 456678889999999999887766555444332 23555555643221 124
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
..|+|+.+..
T Consensus 95 ~fD~I~~~~~ 104 (197)
T PRK11207 95 EYDFILSTVV 104 (197)
T ss_pred CcCEEEEecc
Confidence 5799988754
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.46 Score=42.05 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=53.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCC-------------CHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-------------SPDQRE 82 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~-------------~~~~~~ 82 (218)
.+.+++|.|+ |.+|...+..+...|++|++.+++.++++...+ +. ...+..|.. +.+..+
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lG-----a~~v~v~~~e~g~~~~gYa~~~s~~~~~ 235 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MG-----AEFLELDFKEEGGSGDGYAKVMSEEFIA 235 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-----CeEEeccccccccccccceeecCHHHHH
Confidence 4568999996 999999999999999999999998887654432 32 122223321 123333
Q ss_pred HHHHHHHhhcCCcccEEEecCCC
Q 027816 83 KLIQEVGSKFNGKLNILVNNVGT 105 (218)
Q Consensus 83 ~~~~~~~~~~~~~id~vv~~ag~ 105 (218)
+..+.+.+.. ...|++|+++-+
T Consensus 236 ~~~~~~~e~~-~~~DIVI~Tali 257 (511)
T TIGR00561 236 AEMELFAAQA-KEVDIIITTALI 257 (511)
T ss_pred HHHHHHHHHh-CCCCEEEECccc
Confidence 3333343333 468999999844
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=95.05 E-value=0.2 Score=41.54 Aligned_cols=42 Identities=19% Similarity=0.306 Sum_probs=36.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+.+++|.|+++++|..++..+-+.|++|+.+.+++++.+..
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 206 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA 206 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 467999999999999999999999999999999988765544
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.071 Score=43.47 Aligned_cols=45 Identities=20% Similarity=0.231 Sum_probs=38.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+++||+++|.|.|.-+|+-++..|.++|+.|.++.+....+++.
T Consensus 151 i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~ 195 (287)
T PRK14173 151 IPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAV 195 (287)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 578999999999999999999999999999999887666555443
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.071 Score=43.40 Aligned_cols=47 Identities=21% Similarity=0.333 Sum_probs=40.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
..+++||.++|.|-|.-+|+-++..|.++|+.|..+......+++..
T Consensus 154 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~ 200 (284)
T PRK14177 154 GIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIV 200 (284)
T ss_pred CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHH
Confidence 35789999999999999999999999999999999986665555443
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.084 Score=43.03 Aligned_cols=45 Identities=20% Similarity=0.302 Sum_probs=38.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+++||+++|.|.|.-+|+-++..|.++|+.|.++......+++.
T Consensus 154 i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~ 198 (284)
T PRK14190 154 IDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAEL 198 (284)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHH
Confidence 568999999999999999999999999999999886655544443
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.07 Score=43.48 Aligned_cols=46 Identities=22% Similarity=0.342 Sum_probs=39.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
..+++||.++|.|.|.-+|+-++..|.++|+.|.++......+.+.
T Consensus 159 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~~ 204 (287)
T PRK14176 159 GVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKKY 204 (287)
T ss_pred CCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHHH
Confidence 3578999999999999999999999999999999988665554443
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.13 Score=38.45 Aligned_cols=43 Identities=28% Similarity=0.349 Sum_probs=33.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+...+++|+| +|-.|...++.+...|++|+..+.+.+..++.
T Consensus 17 ~~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~ 59 (168)
T PF01262_consen 17 GVPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQL 59 (168)
T ss_dssp EE-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred CCCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence 44557888888 78899999999999999999999887766543
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.87 Score=36.17 Aligned_cols=140 Identities=14% Similarity=0.190 Sum_probs=74.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh-------------------hhHHHHHHHhhhCCCeEEEEEe-
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSKGFVVSGSVC- 73 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~v~~~~~- 73 (218)
++..+|+|.|. ||.|++.+..|++.|. ++.+++-+. ++.+-..+.+..-++..+....
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~ 106 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN 106 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence 45667888876 6899999999999997 677765421 1111222222222222222221
Q ss_pred eCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEe
Q 027816 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFIS 153 (218)
Q Consensus 74 D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~s 153 (218)
|.-..+..++++. ..+|+||-+-- |+..=..++..| .+++. .+|...
T Consensus 107 ~f~t~en~~~~~~-------~~~DyvIDaiD---------------------~v~~Kv~Li~~c----~~~ki-~vIss~ 153 (263)
T COG1179 107 DFITEENLEDLLS-------KGFDYVIDAID---------------------SVRAKVALIAYC----RRNKI-PVISSM 153 (263)
T ss_pred hhhCHhHHHHHhc-------CCCCEEEEchh---------------------hhHHHHHHHHHH----HHcCC-CEEeec
Confidence 2222333333332 35677775522 122222333433 33432 333333
Q ss_pred cCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccC
Q 027816 154 SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188 (218)
Q Consensus 154 s~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~ 188 (218)
..++...+.-...-..+|.-.+=|.+.++.++...
T Consensus 154 Gag~k~DPTri~v~DiskT~~DPLa~~vR~~LRk~ 188 (263)
T COG1179 154 GAGGKLDPTRIQVADISKTIQDPLAAKVRRKLRKR 188 (263)
T ss_pred cccCCCCCceEEeeechhhccCcHHHHHHHHHHHh
Confidence 33344444444667788888888888888887655
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.075 Score=43.13 Aligned_cols=46 Identities=20% Similarity=0.356 Sum_probs=39.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
..+++||.++|.|-|.-+|+-++..|.++|+.|.++.+....+.+.
T Consensus 153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~ 198 (278)
T PRK14172 153 NIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEV 198 (278)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHH
Confidence 3578999999999999999999999999999999987665555443
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.19 Score=41.94 Aligned_cols=77 Identities=26% Similarity=0.305 Sum_probs=49.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++++|+|+ +++|..++..+...|+ +|++++++.++.+.. .++. ... ..|..+.+..++ +.+..++
T Consensus 172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~g---a~~---~i~~~~~~~~~~----l~~~~~~ 239 (351)
T cd08233 172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELG---ATI---VLDPTEVDVVAE----VRKLTGG 239 (351)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhC---CCE---EECCCccCHHHH----HHHHhCC
Confidence 4789999985 8999999998889999 788888888776544 3331 111 123333332222 2222222
Q ss_pred -cccEEEecCC
Q 027816 95 -KLNILVNNVG 104 (218)
Q Consensus 95 -~id~vv~~ag 104 (218)
.+|.++.+.|
T Consensus 240 ~~~d~vid~~g 250 (351)
T cd08233 240 GGVDVSFDCAG 250 (351)
T ss_pred CCCCEEEECCC
Confidence 4899999987
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.17 Score=42.57 Aligned_cols=78 Identities=19% Similarity=0.340 Sum_probs=48.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++++|.|+ |++|...+..+...|+ +|+.+++++++.+.. +++.. .. ..|..+.+..+++. +... +.
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga---~~---~i~~~~~~~~~~i~-~~~~--~~ 244 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGA---TH---TVNSSGTDPVEAIR-ALTG--GF 244 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC---ce---EEcCCCcCHHHHHH-HHhC--CC
Confidence 3689999985 9999999888888898 488888888775544 33321 11 12333322222222 2211 12
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
.+|+++.+.|
T Consensus 245 g~d~vid~~g 254 (358)
T TIGR03451 245 GADVVIDAVG 254 (358)
T ss_pred CCCEEEECCC
Confidence 5899999887
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.23 Score=41.88 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=50.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCH-HHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~~ 93 (218)
.|.+|+|.|+ |++|...+..+...|+ +|+.++++.++.+.+ +++.. .. ..|..+. +++.+.+.++. +
T Consensus 187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga---~~---~i~~~~~~~~~~~~v~~~~---~ 255 (369)
T cd08301 187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGV---TE---FVNPKDHDKPVQEVIAEMT---G 255 (369)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCC---ce---EEcccccchhHHHHHHHHh---C
Confidence 4679999985 8999998888888898 799999988776544 33321 11 1222221 23333333332 2
Q ss_pred CcccEEEecCC
Q 027816 94 GKLNILVNNVG 104 (218)
Q Consensus 94 ~~id~vv~~ag 104 (218)
+.+|+++.+.|
T Consensus 256 ~~~d~vid~~G 266 (369)
T cd08301 256 GGVDYSFECTG 266 (369)
T ss_pred CCCCEEEECCC
Confidence 36899999876
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.22 Score=42.54 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=35.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.|.+++|+|++|++|..++..+...|++++.+.++.++.+.+
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~ 230 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC 230 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 467999999999999999988888999988887777655433
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.4 Score=42.43 Aligned_cols=42 Identities=21% Similarity=0.245 Sum_probs=35.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
.+.+|+|+|+ |.+|...+..+...|++|+++++++++++...
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae 205 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE 205 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4778999985 78999999999999999999999998876543
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.081 Score=43.24 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=35.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
++|.|.|+ |-+|..+|..|+++|++|++.+++++..+...+
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 46788887 889999999999999999999999888776543
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.075 Score=43.29 Aligned_cols=38 Identities=24% Similarity=0.285 Sum_probs=34.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR 49 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r 49 (218)
..+++||.+.|.|.|+-+|+-++..|.++|+.|.++..
T Consensus 153 ~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s 190 (284)
T PRK14179 153 NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHS 190 (284)
T ss_pred CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECC
Confidence 35689999999999999999999999999999988843
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.085 Score=42.94 Aligned_cols=45 Identities=27% Similarity=0.392 Sum_probs=38.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+++||.++|.|.|.-+|+-++..|.++|+.|.++.+....+.+.
T Consensus 154 i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~ 198 (282)
T PRK14180 154 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSH 198 (282)
T ss_pred CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHH
Confidence 478899999999999999999999999999999987666555443
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.32 Score=41.64 Aligned_cols=36 Identities=25% Similarity=0.352 Sum_probs=30.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.++..+|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 456778999986 5899999999999997 78888753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 218 | ||||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 4e-63 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 3e-58 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 2e-56 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 2e-56 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 2e-22 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 8e-20 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 9e-18 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 6e-17 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 4e-16 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 6e-16 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 1e-15 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 1e-15 | ||
| 2b4q_A | 276 | Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex | 2e-15 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 7e-15 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 3e-14 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 4e-14 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 1e-13 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 1e-13 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 1e-13 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 1e-13 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 2e-13 | ||
| 4afn_A | 269 | Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote | 2e-13 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 2e-13 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 3e-13 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-13 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 4e-13 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-13 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 5e-13 | ||
| 1ahi_A | 255 | 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With | 5e-13 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 5e-13 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 6e-13 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 6e-13 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 6e-13 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 7e-13 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 7e-13 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 8e-13 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 9e-13 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 9e-13 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 1e-12 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 1e-12 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 1e-12 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 1e-12 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-12 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 1e-12 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 1e-12 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-12 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 2e-12 | ||
| 4hp8_A | 247 | Crystal Structure Of A Putative 2-Deoxy-D-Gluconate | 2e-12 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 2e-12 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 2e-12 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 2e-12 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 2e-12 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 2e-12 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 5e-12 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 7e-12 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 7e-12 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 7e-12 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 9e-12 | ||
| 3ak4_A | 263 | Crystal Structure Of Nadh-Dependent Quinuclidinone | 1e-11 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 1e-11 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 2e-11 | ||
| 2yz7_A | 260 | X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F | 2e-11 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 4e-11 | ||
| 3gaf_A | 256 | 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De | 4e-11 | ||
| 3rkr_A | 262 | Crystal Structure Of A Metagenomic Short-Chain Oxid | 5e-11 | ||
| 1h5q_A | 265 | Mannitol Dehydrogenase From Agaricus Bisporus Lengt | 6e-11 | ||
| 3i4f_A | 264 | Structure Of Putative 3-oxoacyl-reductase From Baci | 7e-11 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 8e-11 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 8e-11 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 1e-10 | ||
| 3lf1_A | 265 | Apo Structure Of The Short Chain Oxidoreductase Q9h | 1e-10 | ||
| 3gk3_A | 269 | Crystal Structure Of Acetoacetyl-Coa Reductase From | 2e-10 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 3e-10 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 3e-10 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 3e-10 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 4e-10 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 4e-10 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 6e-10 | ||
| 3un1_A | 260 | Crystal Structure Of An Oxidoreductase From Sinorhi | 6e-10 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 7e-10 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 9e-10 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 1e-09 | ||
| 4eso_A | 255 | Crystal Structure Of A Putative Oxidoreductase Prot | 1e-09 | ||
| 3vc7_A | 254 | Crystal Structure Of A Putative Oxidoreductase From | 1e-09 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 2e-09 | ||
| 3lyl_A | 247 | Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas | 2e-09 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 3e-09 | ||
| 4imr_A | 275 | Crystal Structure Of 3-oxoacyl (acyl-carrier-protei | 3e-09 | ||
| 1hxh_A | 253 | Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D | 3e-09 | ||
| 2qq5_A | 260 | Crystal Structure Of Human Sdr Family Member 1 Leng | 4e-09 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 5e-09 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 5e-09 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 6e-09 | ||
| 3gdf_A | 267 | Crystal Structure Of The Nadp-Dependent Mannitol De | 1e-08 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-08 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 1e-08 | ||
| 3o38_A | 266 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 1e-08 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 1e-08 | ||
| 3kzv_A | 254 | The Crystal Structure Of A Cytoplasmic Protein With | 2e-08 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 2e-08 | ||
| 3u0b_A | 454 | Crystal Structure Of An Oxidoreductase From Mycobac | 3e-08 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 3e-08 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 3e-08 | ||
| 3ctm_A | 279 | Crystal Structure Of A Carbonyl Reductase From Cand | 3e-08 | ||
| 3m1l_A | 432 | Crystal Strucutre Of A C-Terminal Trunacted Mutant | 3e-08 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 3e-08 | ||
| 3q6i_A | 446 | Crystal Structure Of Fabg4 And Coenzyme Binary Comp | 4e-08 | ||
| 3afm_A | 258 | Crystal Structure Of Aldose Reductase A1-R Responsi | 4e-08 | ||
| 4fw8_A | 454 | Crystal Structure Of Fabg4 Complexed With Coenzyme | 4e-08 | ||
| 3v1t_C | 462 | Crystal Structure Of A Putative Ketoacyl Reductase | 4e-08 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 4e-08 | ||
| 3lls_A | 475 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-08 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 4e-08 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 4e-08 | ||
| 3ezl_A | 256 | Crystal Structure Of Acetyacetyl-Coa Reductase From | 5e-08 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 5e-08 | ||
| 3vtz_A | 269 | Structure Of Thermoplasma Volcanium Aldohexose Dehy | 5e-08 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 5e-08 | ||
| 4egf_A | 266 | Crystal Structure Of A L-Xylulose Reductase From My | 6e-08 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 6e-08 | ||
| 4fc6_A | 277 | Studies On Dcr Shed New Light On Peroxisomal Beta-O | 6e-08 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 7e-08 | ||
| 1ybv_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 9e-08 | ||
| 1doh_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 1e-07 | ||
| 3tsc_A | 277 | Crystal Structure Of Short Chain Dehydrogenase Map_ | 1e-07 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 1e-07 | ||
| 3a28_C | 258 | Crystal Structure Of L-2,3-Butanediol Dehydrogenase | 1e-07 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 1e-07 | ||
| 3t4x_A | 267 | Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU | 2e-07 | ||
| 2wdz_A | 254 | Crystal Structure Of The Short Chain Dehydrogenase | 2e-07 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 2e-07 | ||
| 1yde_A | 270 | Crystal Structure Of Human Retinal Short-Chain Dehy | 2e-07 | ||
| 2pd6_A | 264 | Structure Of Human Hydroxysteroid Dehydrogenase Typ | 2e-07 | ||
| 2dtd_A | 264 | Structure Of Thermoplasma Acidophilum Aldohexose De | 3e-07 | ||
| 4iiu_A | 267 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 3e-07 | ||
| 3ksu_A | 262 | Crystal Structure Of Short-Chain Dehydrogenase From | 3e-07 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-07 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 4e-07 | ||
| 2bd0_A | 244 | Chlorobium Tepidum Sepiapterin Reductase Complexed | 4e-07 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 4e-07 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 4e-07 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 4e-07 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 5e-07 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 5e-07 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 6e-07 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 7e-07 | ||
| 3tzq_B | 271 | Crystal Structure Of A Short-Chain Type Dehydrogena | 8e-07 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 1e-06 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 2e-06 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 2e-06 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 2e-06 | ||
| 2o23_A | 265 | The Structure Of Wild-Type Human Hadh2 (17beta-Hydr | 2e-06 | ||
| 1so8_A | 261 | Abeta-bound Human Abad Structure [also Known As 3-h | 2e-06 | ||
| 1u7t_A | 261 | Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT | 2e-06 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 2e-06 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 3e-06 | ||
| 1wma_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Hyd | 3e-06 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 3e-06 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 3e-06 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 3e-06 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 4e-06 | ||
| 4dry_A | 281 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 4e-06 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 4e-06 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 4e-06 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 4e-06 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 5e-06 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 5e-06 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 5e-06 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 5e-06 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 5e-06 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 5e-06 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 6e-06 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 6e-06 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 6e-06 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 6e-06 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 6e-06 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 8e-06 | ||
| 3uxy_A | 266 | The Crystal Structure Of Short Chain Dehydrogenase | 9e-06 | ||
| 2y93_A | 281 | Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2 | 1e-05 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 1e-05 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 1e-05 | ||
| 3u9l_A | 324 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 1e-05 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 1e-05 | ||
| 1w6u_A | 302 | Structure Of Human Decr Ternary Complex Length = 30 | 2e-05 | ||
| 2fwm_X | 250 | Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih | 2e-05 | ||
| 1uls_A | 245 | Crystal Structure Of Tt0140 From Thermus Thermophil | 2e-05 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 2e-05 | ||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 2e-05 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 3e-05 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 3e-05 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 3e-05 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 3e-05 | ||
| 2bgk_A | 278 | X-Ray Structure Of Apo-Secoisolariciresinol Dehydro | 3e-05 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 4e-05 | ||
| 1e3s_A | 261 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 4e-05 | ||
| 1e3w_A | 261 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 4e-05 | ||
| 1e6w_A | 260 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 4e-05 | ||
| 1gz6_A | 319 | (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat | 5e-05 | ||
| 2pfg_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Big | 5e-05 | ||
| 3m1a_A | 281 | The Crystal Structure Of A Short-Chain Dehydrogenas | 6e-05 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 6e-05 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 6e-05 | ||
| 2gdz_A | 267 | Crystal Structure Of 15-Hydroxyprostaglandin Dehydr | 6e-05 | ||
| 3nyw_A | 250 | Crystal Structure Of A Betaketoacyl-[acp] Reductase | 1e-04 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 1e-04 | ||
| 3s55_A | 281 | Crystal Structure Of A Putative Short-Chain Dehydro | 1e-04 | ||
| 1w73_A | 302 | Binary Structure Of Human Decr Solved By Semet Sad. | 2e-04 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 2e-04 | ||
| 3imf_A | 257 | 1.99 Angstrom Resolution Crystal Structure Of A Sho | 3e-04 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 3e-04 | ||
| 2a4k_A | 263 | 3-Oxoacyl-[acyl Carrier Protein] Reductase From The | 5e-04 | ||
| 2nwq_A | 272 | Short Chain Dehydrogenase From Pseudomonas Aerugino | 5e-04 | ||
| 3g1t_A | 258 | Crystal Structure Of Short Chain Dehydrogenase From | 6e-04 | ||
| 3kvo_A | 346 | Crystal Structure Of The Catalytic Domain Of Human | 7e-04 |
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256 | Back alignment and structure |
|
| >pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262 | Back alignment and structure |
|
| >pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265 | Back alignment and structure |
|
| >pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265 | Back alignment and structure |
|
| >pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255 | Back alignment and structure |
|
| >pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275 | Back alignment and structure |
|
| >pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253 | Back alignment and structure |
|
| >pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446 | Back alignment and structure |
|
| >pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258 | Back alignment and structure |
|
| >pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454 | Back alignment and structure |
|
| >pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283 | Back alignment and structure |
|
| >pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267 | Back alignment and structure |
|
| >pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270 | Back alignment and structure |
|
| >pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264 | Back alignment and structure |
|
| >pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264 | Back alignment and structure |
|
| >pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265 | Back alignment and structure |
|
| >pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261 | Back alignment and structure |
|
| >pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266 | Back alignment and structure |
|
| >pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302 | Back alignment and structure |
|
| >pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250 | Back alignment and structure |
|
| >pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261 | Back alignment and structure |
|
| >pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261 | Back alignment and structure |
|
| >pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260 | Back alignment and structure |
|
| >pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319 | Back alignment and structure |
|
| >pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276 | Back alignment and structure |
|
| >pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267 | Back alignment and structure |
|
| >pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281 | Back alignment and structure |
|
| >pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263 | Back alignment and structure |
|
| >pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272 | Back alignment and structure |
|
| >pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258 | Back alignment and structure |
|
| >pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 318 bits (818), Expect = e-111
Identities = 120/213 (56%), Positives = 154/213 (72%), Gaps = 4/213 (1%)
Query: 1 MANAESS----FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56
M ++ S RWSLKG TALVTGG++GIG A VEELAGLGA V+TCSRNE EL++
Sbjct: 1 MEESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDE 60
Query: 57 CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA 116
CL+ W+ KG V GSVCD S +R+KL+Q V F+GKLNILVNN G I K +++
Sbjct: 61 CLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTE 120
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176
++Y+ IM TNFE+ YHL Q+ YPLLKAS G+++F+SS+ G S + S S+Y A+K A+NQ
Sbjct: 121 KDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQ 180
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
+T++LACEWAKDNIR NSVAP T LVE +
Sbjct: 181 MTKSLACEWAKDNIRVNSVAPGVILTPLVETAI 213
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 318 bits (817), Expect = e-111
Identities = 127/209 (60%), Positives = 154/209 (73%), Gaps = 3/209 (1%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA AE S RWSLK T LVTGGT+GIG A VEE AG GAV+HTC+RNE ELN+CL +
Sbjct: 1 MAGAEQS---QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSK 57
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
WQ KGF V+GSVCDA+ +REKL+Q V S F GKL+IL+NN+G KPT++Y+AE++S
Sbjct: 58 WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFS 117
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++TN ES YHL QL +PLLKASG G+I+F+SS+ G+ GSIY ATK A+NQL RN
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARN 177
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
LACEWA D IR N+VAP T L E V
Sbjct: 178 LACEWASDGIRANAVAPAVIATPLAEAVY 206
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 316 bits (812), Expect = e-110
Identities = 117/200 (58%), Positives = 144/200 (72%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ RW+L+G TALVTGG+RGIG VEELA LGA V+TCSRN+ ELN CL +W+SKGF V
Sbjct: 2 AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 61
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
SVCD +S +R++L+ V + F+GKLNILVNN G I K +Y+ E+YS IM+ NFE+
Sbjct: 62 ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 121
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL L +P LKAS G++VFISSV G V ++YGATK AM+QLTR LA EWAKDN
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 181
Query: 190 IRTNSVAPWYTKTSLVERVM 209
IR N V P TSLVE +
Sbjct: 182 IRVNGVGPGVIATSLVEMTI 201
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 7e-63
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 2/206 (0%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK 64
S+ R L+ ALVT T GIG A LA GA V SR + +++ + Q +
Sbjct: 2 ASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE 61
Query: 65 GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIM 123
G V+G+VC + RE+L+ + G ++ILV+N N I+ + E + KI+
Sbjct: 62 GLSVTGTVCHVGKAEDRERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
N ++T + + V P ++ G GS++ +SSVG + Y +K A+ LT+NLA
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180
Query: 184 EWAKDNIRTNSVAPWYTKTSLVERVM 209
E A NIR N +AP KT+ + +
Sbjct: 181 ELAPRNIRVNCLAPGLIKTNFSQVLW 206
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 186 bits (476), Expect = 2e-59
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 5/200 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC---LKEWQSKGFVVSG 70
S + T LVTGG GIG+ L GA V RN +L L+ + G +
Sbjct: 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFES 129
D + D+ + + V + G+L+ +V+ G + P + +E + + + N
Sbjct: 68 EPTDITNEDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNG 126
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
T ++ + + G GS V ISS+ + YG TK+A++ L + A E
Sbjct: 127 TMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASW 186
Query: 190 IRTNSVAPWYTKTSLVERVM 209
+R NS+ P +T LV +
Sbjct: 187 VRVNSIRPGLIRTDLVAAIT 206
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 184 bits (471), Expect = 6e-59
Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 6/194 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G TALVTG RG+G A E LA GA V L + + KG+ G
Sbjct: 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D E ++ ++ ++IL+NN G RKP +E E + K++ TN S + +
Sbjct: 66 DVTDELAIEAAFSKLDAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLV 124
Query: 134 CQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNI 190
+ + A G I+ I S+ S ++ Y A K + LT ++A EWA+ NI
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSL--TSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182
Query: 191 RTNSVAPWYTKTSL 204
+TN++ P Y T +
Sbjct: 183 QTNAIGPGYILTDM 196
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 183 bits (468), Expect = 3e-58
Identities = 65/198 (32%), Positives = 96/198 (48%), Gaps = 7/198 (3%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+SL G ALVTGG+RGIGQ + L GA V C+R+ + G +
Sbjct: 22 HPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQA 81
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D +S +L Q +G +L+ILVNN GT+ Y + K+M N S
Sbjct: 82 -IPADLSSEAGARRLAQALGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTS 139
Query: 130 TYHLCQLVYPLLKASGV----GSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACE 184
+ Q + PLL+ S ++ I SV G+S +G + YG +KAA++QL+R LA E
Sbjct: 140 VFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKE 199
Query: 185 WAKDNIRTNSVAPWYTKT 202
++I N +AP +
Sbjct: 200 LVGEHINVNVIAPGRFPS 217
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 182 bits (465), Expect = 4e-58
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ G+ ALVTG +GIG+ TV+ L GA V +R +L KE +
Sbjct: 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----CPGIEPVCV 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D D EK + +G +++LVNN I +P +E + E + + + N S + +
Sbjct: 60 DLGDWDATEKALGGIG-----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 114
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAKDNI 190
Q+V + GV GSIV +SS+ ++HV + Y +TK AM LT+ +A E I
Sbjct: 115 SQMVARDMINRGVPGSIVNVSSM--VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKI 172
Query: 191 RTNSVAPWYTKTSLVERVM 209
R NSV P T + ++V
Sbjct: 173 RVNSVNPTVVLTDMGKKVS 191
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 9e-58
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 2/197 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
+ G A++TG + GIG A E A GA + +R L++ + + K G V
Sbjct: 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D A+P+ + +++ V S F G +ILVNN GT + +E + E++ +
Sbjct: 64 VDVATPEGVDAVVESVRSSF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVR 122
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + + P ++A G G+I+ +S+ + + IY TKAA+ ++ LA E KDNIR
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182
Query: 193 NSVAPWYTKTSLVERVM 209
N + P T +
Sbjct: 183 NCINPGLILTPDWIKTA 199
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 181 bits (462), Expect = 1e-57
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G LVTG +GIG+ TV+ L GA V SR + +L+ ++E +
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCV 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + E+ + VG +++LVNN + +P +E + E + + N + +
Sbjct: 60 DLGDWEATERALGSVG-----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAKDNI 190
Q+V L A GV G+IV +SS S + S+Y +TK A++ LT+ +A E I
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQ--CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKI 172
Query: 191 RTNSVAPWYTKTSLVERVM 209
R N+V P TS+ +
Sbjct: 173 RVNAVNPTVVMTSMGQATW 191
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 1e-57
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 8/201 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L A+VTGG + IG A V LA GA V +E K +++ + +G VS V
Sbjct: 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYH 132
D + + + ++ V + G+++ILV G I + + + ++ K + N +
Sbjct: 70 DVTNTESVQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKD 188
CQ V ++ G IV I S+ G + + Y A+KA ++Q R+LA EWA
Sbjct: 129 SCQAVGRIMLEQKQGVIVAIGSMSG--LIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPH 186
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
IR N+VAP Y +T+L M
Sbjct: 187 GIRANAVAPTYIETTLTRFGM 207
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 181 bits (463), Expect = 2e-57
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 9/207 (4%)
Query: 3 NAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62
+ + L+G ALVTGG+RG+G + LA G V SRN E ++ ++
Sbjct: 7 HHHHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLT 66
Query: 63 SK-GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
K G CD ++ ++ +KL++ V KF GKL+ +VN G N R P E+ +E+ +
Sbjct: 67 EKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQ 125
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV----GGLSHVGSGSIYGATKAAMNQL 177
++ N TY++C+ + LL+ S SI+ I S+ + ++ + Y A+K + L
Sbjct: 126 VIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISA---YAASKGGVASL 182
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSL 204
T+ LA EW + IR N +AP + +T +
Sbjct: 183 TKALAKEWGRYGIRVNVIAPGWYRTKM 209
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 180 bits (460), Expect = 3e-57
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV 67
F S L G A++TG GIG+ A GA V N N + E Q G
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
CD S + L SK GK++ILVNN G KP + ++ + N
Sbjct: 62 AFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNV 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S +HL QLV P ++ +G G I+ I+S+ + + + Y ++KAA + L RN+A + +
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 188 DNIRTNSVAPWYTKTSLVERVM 209
NIR N +AP T ++ V+
Sbjct: 180 KNIRVNGIAPGAILTDALKSVI 201
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 1e-56
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 4/211 (1%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
M + + + L G AL+TG T+GIG A GA + R+ EL+ +
Sbjct: 5 MTTTDDRY-AGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRA 63
Query: 61 -WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ G V D A PD +L + F G L++LVNN G + +P ++ + +
Sbjct: 64 LGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLF 122
Query: 120 SKIMTTNFESTYHLCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
+ N + L V ++ A G+I+ ++S L+ + Y +KA + T
Sbjct: 123 DATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMAT 182
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
+ LA E IR NSV P T + +RV
Sbjct: 183 KVLARELGPHGIRANSVCPTVVLTEMGQRVW 213
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 179 bits (456), Expect = 2e-56
Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL G TA+VTG GIG+A A GA V R + + + E G V
Sbjct: 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVA 86
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A + + +E+ + ++++LVNN G R P E S + +++T N ++ + L
Sbjct: 87 DLADLEGAANVAEELAA--TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVL 144
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDNIR 191
+ + A G G IV I+S+ LS G ++ Y A+K A+ LTR LA EWA +
Sbjct: 145 SRSFGTAMLAHGSGRIVTIASM--LSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202
Query: 192 TNSVAPWYTKTSL 204
N++AP Y T+
Sbjct: 203 VNALAPGYVVTAN 215
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 6e-56
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 3/198 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGS 71
L A+VTGG+ GIG ATVE L GA V C+R+ L + G + S
Sbjct: 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD Q + G +ILVNN G E + E +S+ + F S
Sbjct: 65 VCDVLDALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVI 123
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
H + P L++ +IV ++S+ A +A + L R++A E+A +R
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVR 183
Query: 192 TNSVAPWYTKTSLVERVM 209
N + ++ R
Sbjct: 184 VNGILIGLVESGQWRRRF 201
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 8e-56
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 7/200 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
S +G A +TGG G+G+ L+ LGA SR L ++ S+ G V
Sbjct: 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 82
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD PD + + E+ G NI++NN N PT S + I T
Sbjct: 83 CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 141
Query: 133 LCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAKDN 189
+ + L+KA + + I+++ + GSG + + KA + ++++LA EW K
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTI--YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYG 199
Query: 190 IRTNSVAPWYTKTSLVERVM 209
+R N + P KT +
Sbjct: 200 MRFNVIQPGPIKTKGAFSRL 219
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 1e-55
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 10/200 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G A VTG GIG A GA + R L++ +E V + V
Sbjct: 8 RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE--LGAAVAARIVA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + E ++ILVN+ G +E + ++M N + +
Sbjct: 66 DVTDAEAMTAAAAEA-EAV-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDN 189
+ + A G G+IV + S+ + + Y A+K A++QLTR LA EWA
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSM--SGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRG 181
Query: 190 IRTNSVAPWYTKTSLVERVM 209
+R N++AP Y T + ++
Sbjct: 182 VRVNALAPGYVATEMTLKMR 201
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 175 bits (447), Expect = 6e-55
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
A++TG + GIG+AT A GA V R+ L + ++ + G V+
Sbjct: 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNF 127
V D + +++++ KF GKL+ILVNN G + K S E Y + N
Sbjct: 64 VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
S L + P L ++ G IV ISS+ GL Y KAA++Q TRN A +
Sbjct: 123 RSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181
Query: 187 KDNIRTNSVAPWYTKTSLVERVMFS 211
+ IR NS++P T +
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMP 206
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 7e-55
Identities = 41/196 (20%), Positives = 72/196 (36%), Gaps = 3/196 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L +++G +G A GA + +R L K+ G D
Sbjct: 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHL 133
Q L+ E + G++++++NN KP + E + L
Sbjct: 69 ITDDAQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q P L+ S G++V ++S+ Y K+A+ +++ LA E + IR N
Sbjct: 128 IQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186
Query: 194 SVAPWYTKTSLVERVM 209
SV P Y ++
Sbjct: 187 SVLPGYIWGGTLKSYF 202
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 175 bits (446), Expect = 8e-55
Identities = 49/204 (24%), Positives = 83/204 (40%), Gaps = 4/204 (1%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
+ F L+ A +TGG GIG E G SR+ + ++
Sbjct: 13 LPAYRHLFCPD--LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARK 70
Query: 61 -WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ G D +P + + +F G+++IL+N N P S +
Sbjct: 71 LAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNAF 129
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
+M + T+++ +++Y G IV I++ G G+ KAA++ +TR
Sbjct: 130 KTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTR 189
Query: 180 NLACEWAKDNIRTNSVAPWYTKTS 203
+LA EW NIR NS+AP +
Sbjct: 190 HLAVEWGPQNIRVNSLAPGPISGT 213
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 1e-54
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 4/199 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ AL+TG GIG+AT LA G V R E+ + E G
Sbjct: 25 NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + Q ++++ KF G L+I+V N G + P + E+ + + N T+
Sbjct: 85 DVSDELQMRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFL 143
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDNI 190
L P LK G G+IV +SS+ G + + Y ATKAA + + LA E K +I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203
Query: 191 RTNSVAPWYTKTSLVERVM 209
R N+V P +T++ +
Sbjct: 204 RVNAVCPGAIETNISDNTK 222
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 2e-54
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G AL+TG + GIG+ A GA V +R+ L E G C
Sbjct: 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D PDQ ++ ++ + G ++I V N G + ++ EE+ +I TN +
Sbjct: 89 DVTQPDQVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLT 147
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSG---SIYGATKAAMNQLTRNLACEWAKDN 189
Q + G+ G+I+ +S+ G + S Y +KAA+ LT+ +A E A
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHI-INIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ 206
Query: 190 IRTNSVAPWYTKTSLVE 206
IR NSV+P Y +T LVE
Sbjct: 207 IRVNSVSPGYIRTELVE 223
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 5e-54
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
S + L A+VTG GIG+A A GA V + G
Sbjct: 5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI 64
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
G C+ RE +I+ +F GK+ +LVNN G + ++ N S
Sbjct: 65 GLECNVTDEQHREAVIKAALDQF-GKITVLVNNAGGG-GPKPFDMPMSDFEWAFKLNLFS 122
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ L QL P ++ +G G+I+ ISS+ G + + YG++KAA+N LTRN+A +
Sbjct: 123 LFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMG 182
Query: 190 IRTNSVAPWYTKTSLVERVM 209
IR N++AP KT + V+
Sbjct: 183 IRVNAIAPGAIKTDALATVL 202
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 6e-54
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
+ F+S L +VTGG GIG+AT E A GA V NE + E
Sbjct: 13 LGTENLYFQSMD--LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE 70
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
SK F V D +S E ++++ +K+ G++++LVNN G + E +
Sbjct: 71 IGSKAFGV---RVDVSSAKDAESMVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWD 126
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+IM+ N + + + V P+++ +G GSI+ +S S + + Y A+K A++ LTR
Sbjct: 127 RIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRA 186
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
+A + AK+ IR N+VAP + ++
Sbjct: 187 MAMDHAKEGIRVNAVAPGTIDSPYFTKIF 215
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 171 bits (437), Expect = 9e-54
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTG IG AT LA G + N L K + KG VCD
Sbjct: 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
S + + V F GK++ L NN G P +Y ++++++++T N +H+
Sbjct: 65 VTSEEAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 123
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ V + G IV +S+ G+ + + YG +K A+ LT A + A NIR N
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183
Query: 194 SVAPWYTKTSLVERVM 209
+++P Y +
Sbjct: 184 AISPGYMGPGFMWERQ 199
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 1e-53
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
++K ++TGG+ G+G+ A GA V R + +L + E + +
Sbjct: 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQM 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + D +K+I+++ KF G+++IL+NN N P + S ++ ++ T++
Sbjct: 63 DVRNTDDIQKMIEQIDEKF-GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYC 121
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA-KDNIR 191
Q + ++ G+I+ + + A KA + +T+ LA EW K IR
Sbjct: 122 SQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIR 181
Query: 192 TNSVAPWYTKTSLVERVMFSN 212
N++AP + + ++ +
Sbjct: 182 VNAIAPGPIERTGGADKLWIS 202
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 169 bits (432), Expect = 4e-53
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTGG+RGIG+A E L G V SRN E ++ D
Sbjct: 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--------AQSLGAVPLPTDL-EK 54
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
D + L++ G L++LV+ N+RKP +E S EE+ +++ + + + L Q
Sbjct: 55 DDPKGLVKRALEAL-GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIRTNS 194
P + +G G ++FI SV + G + Y K A+ LTR LA EWA+ IR N
Sbjct: 114 PHMAEAGWGRVLFIGSV--TTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171
Query: 195 VAPWYTKTSLVE 206
+ P Y +T
Sbjct: 172 LCPGYVETEFTL 183
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 4e-53
Identities = 63/194 (32%), Positives = 91/194 (46%), Gaps = 7/194 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-----WQSKGFVV 68
L+G A+VTGG GIG+A V+EL LG+ V SR L E +K V
Sbjct: 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
C+ + ++ L++ F GK+N LVNN G P S++ + ++ TN
Sbjct: 75 IPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLT 133
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
T+++C+ VY GSIV I + GA +A + LT++LA EWA
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVH-SGAARAGVYNLTKSLALEWACS 192
Query: 189 NIRTNSVAPWYTKT 202
IR N VAP +
Sbjct: 193 GIRINCVAPGVIYS 206
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 6e-53
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLKG A VTG + GIG A E A GA V + K ++ G C
Sbjct: 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTY 131
+ + P E+ I + F G +++ V N G + + + ++KI++ + Y
Sbjct: 91 NISDPKSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVY 149
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG---SIYGATKAAMNQLTRNLACEWAKD 188
+ + + K +G GS++ SS+ G V + Y KAA L ++LA EWA
Sbjct: 150 YCSHNIGKIFKKNGKGSLIITSSISGKI-VNIPQLQAPYNTAKAACTHLAKSLAIEWAP- 207
Query: 189 NIRTNSVAPWYTKTSLVERV 208
R N+++P Y T + +
Sbjct: 208 FARVNTISPGYIDTDITDFA 227
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 7e-53
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 6/209 (2%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
S L G A+VTG GIG A LA G V + + +
Sbjct: 15 QTQGPGSMNHPD--LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK 72
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
G + D + Q ++ + F G ++ LV N G I+ + E++
Sbjct: 73 I---GCGAAACRVDVSDEQQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFD 128
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+++ N + + P + G G+IV +SS+ G VG YG +KA + QL+R
Sbjct: 129 RVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRI 188
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
A E IR+N++ P + T + + M
Sbjct: 189 TAAELRSSGIRSNTLLPAFVDTPMQQTAM 217
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 1e-52
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLK +VTG GIG+A ++ A ++V E LN+ ++E + G V G
Sbjct: 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + E+ ++ + ++++L NN G + P E S E + +++ N S ++
Sbjct: 64 DVSKKKDVEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V P++ G G IV +S+ G+ +G+ Y K + LTR++A + IR
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 193 NSVAPWYTKTSLVERVM 209
+V P KT++
Sbjct: 183 VAVLPGTVKTNIGLGSS 199
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 2e-52
Identities = 62/200 (31%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGS 71
LKG LVTG RGIG A A GA V R E L + + +S G ++
Sbjct: 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFEST 130
+ A+ Q +L V +F G+L+ L++N R P + E++ ++M N +T
Sbjct: 72 NLENATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNAT 130
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW-AKDN 189
+ L + + PLLK S SI F SS G + YG +K A L + LA E
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTA 190
Query: 190 IRTNSVAPWYTKTSLVERVM 209
+R NS+ P T+T + +
Sbjct: 191 VRANSINPGATRTGMRAQAY 210
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 2e-52
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
T ++TG + GIG+ T A GA V R+ L + + G V+
Sbjct: 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMTTNF 127
V D + D ++++I +F GK+++LVNN G + + Y K + N
Sbjct: 64 VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
++ + + V P L AS G IV +SS V G Y KAA++Q TR+ A + A
Sbjct: 123 QAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 181
Query: 187 KDNIRTNSVAPWYTKTSLVERVMFS 211
K IR NSV+P +T +
Sbjct: 182 KFGIRVNSVSPGMVETGFTNAMGMP 206
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 2e-52
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGS 71
G + ++TG + GIG++ A GA V RNE L + ++ G ++
Sbjct: 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFES 129
V D ++ +I +KF GK++ILVNN G N+ T + E Y K NF++
Sbjct: 84 VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 130 TYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ Q L + G IV +SS V G Y KAA++Q TR A + +
Sbjct: 143 VIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 189 NIRTNSVAPWYTKTSLVERVMFS 211
+R NSV+P T + +
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLP 224
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 3e-52
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+G A+V GGT G+G ATV L GA V RNE + + +E+ + + D
Sbjct: 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHAL---RSD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A ++ L G G +++L N G + +P + S Y + N + +
Sbjct: 63 IADLNEIAVLGAAAGQTL-GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTV 121
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
Q + PL++ G SIVF SSV S+Y A+KAA+ LA E IR NS
Sbjct: 122 QRLTPLIREGG--SIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNS 179
Query: 195 VAPWYTKTSLVERVMFS 211
V+P + T +
Sbjct: 180 VSPGFIDTPTKGVAGIT 196
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 9e-52
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L A++TG T GIG A + GA V R + L+ + E G G D
Sbjct: 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQAD 83
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+A+ + ++L ++V ++ G++++L N G P E + E+Y N +
Sbjct: 84 SANLAELDRLYEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTV 142
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
Q PLL S+V S G + + S+Y A+KAA+ RN + IR N+
Sbjct: 143 QKALPLLARGS--SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200
Query: 195 VAPWYTKTSLVERVM 209
++P T+T+ + +
Sbjct: 201 LSPGPTETTGLVELA 215
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 1e-51
Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 14/196 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S LVTGG++GIG+A VE L + +
Sbjct: 1 SNAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------SAENLKFIKA 51
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D ++ + K + + N G I+ + E K++ N S+ +
Sbjct: 52 DLTKQQDITNVLDII--KN-VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYF 108
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ + LK SIVF S + Y +K A+ Q+T++LA + AK IR N
Sbjct: 109 IKGLENNLKVGA--SIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVN 166
Query: 194 SVAPWYTKTSLVERVM 209
+V P T L ++
Sbjct: 167 TVCPGTVDTDLYRNLI 182
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 2e-51
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 12/195 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
A+VTGG+ GIG A V+ L GA V + S +E ++ D
Sbjct: 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------ID 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ ++ ++ +++ K+ G+++ILVNN G P E + +I+ N +Y +
Sbjct: 62 VTNEEEVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMA 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P++ A G GSI+ I+SV + + + Y +K A+ LTR++A ++A IR N+
Sbjct: 121 KYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNA 179
Query: 195 VAPWYTKTSLVERVM 209
V P T +V +
Sbjct: 180 VCPGTIMTPMVIKAA 194
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 3e-51
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFV 67
S T +VTGG RGIG A +A GA V R+ + + ++ + G
Sbjct: 6 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVK 65
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
CD ++ D K IQ++ + G ++ L+ N G ++ KP E + E+++ + N
Sbjct: 66 TKAYQCDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNV 124
Query: 128 ESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI-------YGATKAAMNQLTR 179
++ C+ V L+ GSIV SS+ S Y ++KAA + L +
Sbjct: 125 FGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVK 184
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERV 208
LA EWA IR N+++P Y T +
Sbjct: 185 GLAAEWASAGIRVNALSPGYVNTDQTAHM 213
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 3e-51
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 12/208 (5%)
Query: 2 ANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61
E+ + S +G ALVTG GIG A V L GA V R + L
Sbjct: 13 LGTENLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL--- 69
Query: 62 QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
D + L V + G+L+I+VNN G R E + ++S
Sbjct: 70 --------HLPGDLREAAYADGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSL 120
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ N E+ + +C+ PL+ A+G G+IV ++S GL ++Y TKAA+ LT+ +
Sbjct: 121 SLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCM 180
Query: 182 ACEWAKDNIRTNSVAPWYTKTSLVERVM 209
+ A IR N+V P T ++
Sbjct: 181 GMDHAPQGIRINAVCPNEVNTPMLRTGF 208
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 4e-51
Identities = 57/195 (29%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTG +RGIG++ V+ L L VV+ +R+E L K +++ + F V V D
Sbjct: 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYV---VGD 58
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
++L+ GK++ LV N G + E + K+ NF S L
Sbjct: 59 ITEDSVLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P LK + G++VF+SS + S YG++KAA+N LA E + ++
Sbjct: 118 VGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAI 174
Query: 194 SVAPWYTKTSLVERV 208
+VAP T + +
Sbjct: 175 AVAPGIVDTDMQVNI 189
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 165 bits (421), Expect = 5e-51
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 3/197 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G A+VTG + GIG+A A GA V +RN L + E G + D
Sbjct: 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHL 133
E L++ +F G L+ NN G S E + + + TN S +
Sbjct: 66 VGDEALHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLA 124
Query: 134 CQLVYPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P + A G GS+ F SS G + + Y A+KA + L + LA E IR
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184
Query: 193 NSVAPWYTKTSLVERVM 209
N++ P T T +
Sbjct: 185 NALLPGGTDTPANFANL 201
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 5e-51
Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 6/197 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+ A++TG GIG T LA GA V E +L G V D
Sbjct: 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVD 65
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK--PTIEYSAEEYSKIMTTNFESTYH 132
+ LI F G+L+I+ NN + + + + + T N T
Sbjct: 66 LTNEVSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+C+ P L ++G G+IV ISS + + Y TKAA+ LTR +A ++ + +R
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184
Query: 193 NSVAPWYTKTSLVERVM 209
N++AP +T +E +
Sbjct: 185 NAIAPGLVRTPRLEVGL 201
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 6e-51
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G +VTGG RGIG V GA V C ++E +E F++ CD
Sbjct: 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL----CD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHL 133
D + L+ E +F G+L+ +VNN G + + E SA+ + +++ N TY L
Sbjct: 63 VTQEDDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+L P L+ S G+++ ISS+ G Y ATK A+ +T+ LA + + +R N
Sbjct: 122 TKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180
Query: 194 SVAPWYTKTSLVERVM 209
++P T L E +
Sbjct: 181 CISPGNIWTPLWEELA 196
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 8e-51
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ G +VTG +RGIG+ +L GA V+ R+ L +E QS G VC
Sbjct: 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-------KPTIEYSAEEYSKIMTTN 126
D++ + L ++V + G+L++LVNN ++ K E A + I
Sbjct: 62 DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA 186
Y L+ +G G IV ISS G L ++ YG KAA ++L + A E
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF-NVPYGVGKAACDKLAADCAHELR 180
Query: 187 KDNIRTNSVAPWYTKTSLVERVM 209
+ + S+ P +T L++ M
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEHM 203
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 8e-51
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV--VSGSV 72
L+TGG G+G+AT LA GA + + L V +V
Sbjct: 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTY 131
D + Q E + +F G+++ NN G + PT ++A E+ K+++ N +
Sbjct: 71 ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ V +++ G G +V +SVGG+ +G+ S Y A K + LTRN A E+ + IR
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189
Query: 192 TNSVAPWYTKTSLVERVM 209
N++AP T +VE M
Sbjct: 190 INAIAPGAIWTPMVENSM 207
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 2e-50
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 6/199 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-- 72
L LVTG + GIG+ A GA V RNE +L + +
Sbjct: 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69
Query: 73 -CDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFEST 130
+ + ++L Q + + +L+ +++N G P E + + + +M N +T
Sbjct: 70 DLLTCTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNAT 128
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ L Q + PLL S GS+VF SS G + Y A+K A + + LA E+ + +
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 187
Query: 191 RTNSVAPWYTKTSLVERVM 209
R N + P T+T++
Sbjct: 188 RVNCINPGGTRTAMRASAF 206
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 2e-50
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTGG RGIG+A + A GA+V C E + + F D
Sbjct: 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VD 57
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+R + ++E G++++LVNN + E+ +++ N + HL
Sbjct: 58 LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 116
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
L ++ G G+IV ++SV GL + Y A+K + LTR+LA + A IR N+
Sbjct: 117 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176
Query: 195 VAPWYTKTSLVERVM 209
VAP T V +
Sbjct: 177 VAPGAIATEAVLEAI 191
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 3e-50
Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+LKG TALVTG T GIG + LA GA + + L E G
Sbjct: 1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPA 58
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + Q E L +F G ++ILVNN G P ++ E + KI+ N + +H
Sbjct: 59 DLSDVAQIEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHG 117
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDNIR 191
+L P ++A G I+ I+SV GL VGS + Y A K + LT+ + E A N+
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGL--VGSTGKAAYVAAKHGVVGLTKVVGLETATSNVT 175
Query: 192 TNSVAPWYTKTSLVER 207
N++ P + T LV++
Sbjct: 176 CNAICPGWVLTPLVQK 191
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 4e-50
Identities = 35/202 (17%), Positives = 66/202 (32%), Gaps = 18/202 (8%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSG 70
R S LV GG+ +G V+ + E
Sbjct: 16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------------HS 63
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFES 129
+ ++ + +I+++ SK K++ V G + + + + ++ N S
Sbjct: 64 FTIKDSGEEEIKSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYS 122
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--K 187
+ + LL G V + L+ YGATKAA + + ++LA E
Sbjct: 123 AFASAHIGAKLLNQGG--LFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLP 180
Query: 188 DNIRTNSVAPWYTKTSLVERVM 209
+ + P T + M
Sbjct: 181 AGSTSLGILPVTLDTPTNRKYM 202
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 6e-50
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G T ++TGG RG+G + GA V + E +E G D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---LGDAARYQHLD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ ++++ +F G ++ LVNN G + S E + K++ N +
Sbjct: 60 VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V P +K +G GSIV ISS GL + S YGA+K + L++ A E D IR NS
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 195 VAPWYTKTSLVERV 208
V P T T +
Sbjct: 179 VHPGMTYTPMTAET 192
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 1e-49
Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 5/197 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-WQSKGFVVSGSVCDA 75
A+VTG + G G A G V + L + + W + V D
Sbjct: 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVG---TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
A I +F G +++LVNN G + E++ K+M N +
Sbjct: 62 ADEGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
C+ V P + G G IV I+SV L S Y +K A+ QLT+++A ++A IR
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180
Query: 193 NSVAPWYTKTSLVERVM 209
N+V P +T + + +
Sbjct: 181 NAVCPGMIETPMTQWRL 197
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 2e-49
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A++TGGT GIG A + GA V R+ K K + + D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ D KL F G ++ LVNN G + K E + E+ K++ N + +
Sbjct: 63 SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 135 QLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNIR 191
+L +K G+G SI+ +SS+ G S Y A+K A+ ++++ A + A ++R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 192 TNSVAPWYTKTSLVERVM 209
N+V P Y KT LV+ +
Sbjct: 182 VNTVHPGYIKTPLVDDLP 199
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 3e-49
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 2 ANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61
E+ + S + ++TG ++GIG V V SR+
Sbjct: 13 LGTENLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP-------- 64
Query: 62 QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
S + D + P+ +++++E +F G+++ LVNN G + KP +E + E+Y
Sbjct: 65 -SADPDIHTVAGDISKPETADRIVREGIERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDH 122
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGS-IYGATKAAMNQLTR 179
+ N +H+ Q + G G IV I++ VG S + TK +N +TR
Sbjct: 123 NLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTR 182
Query: 180 NLACEWAKDNIRTNSVAPWYTKT 202
+LA E+++ +R N+V+P KT
Sbjct: 183 SLAMEFSRSGVRVNAVSPGVIKT 205
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 160 bits (408), Expect = 3e-49
Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ALV+GG RG+G + V + GA V + E E V D
Sbjct: 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVH---LD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
P Q + + + F G L++LVNN G +Y+ E+ +I+ N +
Sbjct: 62 VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V +K +G GSI+ ISS+ GL+ + Y ATK A+ LT++ A E IR NS
Sbjct: 121 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 180
Query: 195 VAPWYTKTSLVERVM 209
+ P KT + + V
Sbjct: 181 IHPGLVKTPMTDWVP 195
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 5e-49
Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 5/194 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+ +VTG G+G+A L G V R L + + + V D
Sbjct: 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGI---VAD 57
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A + + G ++++ GT P Y+AE+ ++M +N ST +
Sbjct: 58 LAHHEDVDVAFAAAVEWG-GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
Q L+ G G + + S + S+Y A+K M +L E +R +
Sbjct: 117 QQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVN 175
Query: 195 VAPWYTKTSLVERV 208
+ P ++ +
Sbjct: 176 LYPSGIRSEFWDNT 189
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 8e-49
Identities = 45/192 (23%), Positives = 72/192 (37%), Gaps = 9/192 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL-------KEWQSKGF 66
SL+G T ++GG+RGIG A + +A GA V +++ K KE + G
Sbjct: 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65
Query: 67 VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTN 126
V D D + + +F G ++I VNN E + + +
Sbjct: 66 QALPIVGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQ 124
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEW 185
TY + Q P +K I+ +S L + Y K M +A E
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184
Query: 186 AKDNIRTNSVAP 197
I +N++ P
Sbjct: 185 RDAGIASNTLWP 196
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-48
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL+G AL+TG G G+ + A GA V R++ + E V
Sbjct: 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV---AA 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYH 132
D + + ++ SKF GK++ILVNN G + + EE+ +I+ N Y
Sbjct: 63 DISKEADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYL 121
Query: 133 LCQLVYPLLKASGVGS----IVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + P K +G I+ ++S G + + Y ATK + +T+ LA E A
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
IR ++ P +T L+ M
Sbjct: 182 KIRVVALNPVAGETPLLTTFM 202
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 1e-48
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGS 71
S+ TA++TG T GIG A LA GA + + + + + V
Sbjct: 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D P + ++ V +F G +ILVNN G + ++ E++ +I+ N S++
Sbjct: 82 PADMTKPSEIADMMAMVADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSF 140
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSIYGATKAAMNQLTRNLACEWAKDN 189
H + P +K G G I+ I+S GL V S S Y A K + LT+ +A E A+
Sbjct: 141 HTIRGAIPPMKKKGWGRIINIASAHGL--VASPFKSAYVAAKHGIMGLTKTVALEVAESG 198
Query: 190 IRTNSVAPWYTKTSLVERVM 209
+ NS+ P Y T LVE+ +
Sbjct: 199 VTVNSICPGYVLTPLVEKQI 218
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 1e-48
Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ ALVTG +RG+G+A LA G +V +R++ + +E + G V
Sbjct: 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ P + +++ Q++ F G+L++ VNN + + +P +E + M N ++
Sbjct: 62 NVGQPAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFC 120
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q L++ +G G IV ISS+G + ++ + + G +KAA+ LTR LA E + I N
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180
Query: 194 SVAPWYTKT 202
+V+ T
Sbjct: 181 AVSGGAIDT 189
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 3e-48
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 15/208 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQSK--GFVV 68
L ++TG +RG G+A +LA L G+V+ +R+E L + +E ++ V
Sbjct: 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62
Query: 69 SGSVCDAASPDQREKLIQEV---GSKFNGKLNILVNNVGT---NIRKPTIEYSAEEYSKI 122
+ D + ++L+ V + +L+NN T + E +
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122
Query: 123 MTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
N S L + S ++V ISS+ L +Y A KAA + L +
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERV 208
LA E + ++R S AP + +
Sbjct: 183 LAAE--EPSVRVLSYAPGPLDNDMQQLA 208
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 4e-48
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+ +VTG + GIG+A E G+ V S ++ CD
Sbjct: 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECD 54
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+PDQ + I + ++ G +++LVNN G S E+ +I+ N Y+
Sbjct: 55 VTNPDQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYAS 113
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P + S SIV ISSV + S Y +K A+ LT+++A ++A +R N+
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNA 172
Query: 195 VAPWYTKTSLVERVM 209
V P T LV +
Sbjct: 173 VCPATIDTPLVRKAA 187
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 4e-48
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 7/195 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF--VVSGS 71
LKG TALVTG T GIG+A L GA V R E +N+ +KE +++ ++
Sbjct: 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
V D + + +I++ K++IL+NN+G + E++ K+ N S
Sbjct: 67 VADLGTEQGCQDVIEKY-----PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGV 121
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
L + + G ++FI+S + + Y ATK L+R+LA N+
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181
Query: 192 TNSVAPWYTKTSLVE 206
N++ P T T VE
Sbjct: 182 VNTIMPGSTLTEGVE 196
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 5e-48
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
++R L+G ALVTGG G+G V+ L G GA V NE + E G
Sbjct: 1 TNR--LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSM 55
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
D +S ++ V + G LN+LVNN G + E++S+++ N ES
Sbjct: 56 FVRHDVSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTES 114
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ CQ +K +G GSI+ ++SV + + Y A+KAA++ LTR A K
Sbjct: 115 VFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQG 173
Query: 190 --IRTNSVAPWYTKTSLVERVM 209
IR NS+ P T +++ +
Sbjct: 174 YAIRVNSIHPDGIYTPMMQASL 195
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 6e-48
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 12/203 (5%)
Query: 14 SLKGMTALVTG--GTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK-GFVVS 69
SLKG +VTG G +G+G A +GA V T + + +KE + G
Sbjct: 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
C S + EKL+++V + F G+++ + N G ++ S E ++ ++ +
Sbjct: 77 AYKCQVDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNG 135
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG----SIYGATKAAMNQLTRNLACEW 185
T+H + V K G GS+V +S+ G H+ + + Y KA + R+LA EW
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITASMSG--HIANFPQEQTSYNVAKAGCIHMARSLANEW 193
Query: 186 AKDNIRTNSVAPWYTKTSLVERV 208
R NS++P Y T L + V
Sbjct: 194 RD-FARVNSISPGYIDTGLSDFV 215
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 6e-48
Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G AL+TGG G+G+A V+ GA V ++ L + G G V D
Sbjct: 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNFES 129
S +++ + + F GK++ L+ N G T + + + I N +
Sbjct: 60 VRSLQDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
H + P L +S GS+VF S G G G +Y ATK A+ L R +A E A +
Sbjct: 119 YIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-H 176
Query: 190 IRTNSVAPWYTKTSLVERV 208
+R N VAP T L
Sbjct: 177 VRVNGVAPGGMNTDLRGPS 195
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 6e-48
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE--WQSKGFVVSGSV 72
LKG A+VTG T GIG LA GA + + + ++ G V
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + L+ + G+++ILVNN G ++ E++ I+ N + +H
Sbjct: 62 ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNI 190
P +K G G I+ I+S GL V S S Y A K + T+ A E A I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGL--VASANKSAYVAAKHGVVGFTKVTALETAGQGI 178
Query: 191 RTNSVAPWYTKTSLVER 207
N++ P + +T LVE+
Sbjct: 179 TANAICPGWVRTPLVEK 195
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 1e-47
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 11/196 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ++T +GIGQA A GA V NE +L + K + V D
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV-----LD 58
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
Q ++ EV +L++L N G ++ +++ M N S Y +
Sbjct: 59 VTKKKQIDQFANEVE-----RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P + A G+I+ +SSV +Y TKAA+ LT+++A ++ + IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173
Query: 194 SVAPWYTKTSLVERVM 209
V P T ++ +
Sbjct: 174 CVCPGTVDTPSLQERI 189
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 1e-47
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 7/209 (3%)
Query: 3 NAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62
E+ + S A+VTG G+G+A LAG G V R L + E
Sbjct: 14 GTENLYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG 73
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSK 121
V D PD L KF G++++L NN GT P + + ++ +
Sbjct: 74 DDALCV---PTDVTDPDSVRALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQ 129
Query: 122 IMTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
++ TN + Q + ++KA G I+ S+ S + Y ATK A+ LT+
Sbjct: 130 VVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTK 189
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERV 208
+ + + +I + T + +++
Sbjct: 190 STSLDGRVHDIACGQIDIGNADTPMAQKM 218
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 2e-47
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL G A+VTG +RGIG A +L LGA V +R+ +L +E + G C
Sbjct: 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + D V + G+ ++LVNN G P E+ ++ N ++ Y
Sbjct: 86 DLSHSDAIAAFATGVLAAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L + P + A+ G I+ ISS+ G + V G+ Y A+K +N L + A E + +R
Sbjct: 145 LLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRV 204
Query: 193 NSVAPWYTKTSLVERV 208
+ VAP +T +
Sbjct: 205 SLVAPGSVRTEFGVGL 220
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 2e-47
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 5/208 (2%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK 64
+S + S +G ALVTGG G+G+ + L+ G V R L+ E +
Sbjct: 21 QSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR 80
Query: 65 -GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKI 122
G +V VCD PDQ L V ++F +L++LVNN G+N+ P E + E+++ I
Sbjct: 81 TGNIVRAVVCDVGDPDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGI 139
Query: 123 MTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+ N + Q + ++KA G I+ S+ + + + Y ATK A+ LT++
Sbjct: 140 VAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKS 199
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERV 208
A + +I + T + R+
Sbjct: 200 TALDGRMHDIACGQIDIGNAATDMTARM 227
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 154 bits (393), Expect = 3e-47
Identities = 55/201 (27%), Positives = 79/201 (39%), Gaps = 11/201 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ +VTG GIGQA E LA GA V N K+ + G
Sbjct: 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT-----IEYSAEEYSKIMTTNFE 128
D + P+ + + ++F G ++ LVNN I + E Y K M+ N +
Sbjct: 66 DVSDPESAKAMADRTLAEF-GGIDYLVNNAA--IFGGMKLDFLLTIDPEYYKKFMSVNLD 122
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ VY + G G+IV SS + S YG K +N LT+ L+ E
Sbjct: 123 GALWCTRAVYKKMTKRGGGAIVNQSSTAAW--LYSNY-YGLAKVGINGLTQQLSRELGGR 179
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
NIR N++AP T
Sbjct: 180 NIRINAIAPGPIDTEANRTTT 200
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 8e-47
Identities = 43/193 (22%), Positives = 73/193 (37%), Gaps = 10/193 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVV-------HTCSRNEVELNKCLKEWQSKGF 66
+L G T +TG +RGIG A A GA V + ++ + G
Sbjct: 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62
Query: 67 VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTN 126
CD DQ + F G ++ILVNN + T++ + + + N
Sbjct: 63 QGLALKCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVN 121
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACE 184
++ Q P L + I+ ++ L+ G + Y K M+ +T LA E
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181
Query: 185 WAKDNIRTNSVAP 197
+ + N++ P
Sbjct: 182 FGPQGVAINALWP 194
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 2e-46
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 9/203 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
LKG L+TG ++GIG AT A GA V + +++ + ++ G +
Sbjct: 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTY 131
D A+ + ++L+ E +KF G +++L+NN G + KP E Y +M N S
Sbjct: 64 ADLATSEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVV 122
Query: 132 HLCQLVYPLLKASGV-----GSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEW 185
+ P L A+ +++ S+ G + G G +YGA KA ++ + +N
Sbjct: 123 MTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFH 182
Query: 186 AKDNIRTNSVAPWYTKTSLVERV 208
KD +R N V+P T+
Sbjct: 183 TKDGVRFNIVSPGTVDTAFHADK 205
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-46
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 5/197 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G A+VTGG++GIG A L GA V + + + ++ GF V
Sbjct: 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EV 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + +Q+ G ++L N G + +P ++ + EE+ N +
Sbjct: 66 DVTKRASVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q+ L ++ G IV +S+ + Y A+K A+ T+ LA E A NIR
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184
Query: 193 NSVAPWYTKTSLVERVM 209
N V P + KT++ ER +
Sbjct: 185 NCVCPGFVKTAMQEREI 201
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 3e-46
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 3/197 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+G ++TG + G+G++ A A VV E E N L+E + G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D L+Q +F GKL++++NN G + E S +++K++ TN +
Sbjct: 65 DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ ++ G+++ +SSV Y A+K M +T LA E+A IR
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 193 NSVAPWYTKTSLVERVM 209
N++ P T +
Sbjct: 184 NNIGPGAINTPINAEKF 200
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 6e-46
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 11/202 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL----NKCLKEWQSKGFVVS 69
L+G +VTG ++GIG+ LA +GA V +R++ L + CL+ + +
Sbjct: 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI- 83
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
E+ + + G G L++L+ N TN K M NF S
Sbjct: 84 --AGTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLS 140
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD- 188
L P+LK S GSIV +SS+ G + Y A+K A++ ++ E++
Sbjct: 141 YVVLTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSR 199
Query: 189 -NIRTNSVAPWYTKTSLVERVM 209
N+ T + +
Sbjct: 200 VNVSITLCVLGLIDTETAMKAV 221
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 8e-46
Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 16/189 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
TA+VT G + L+ G V + + ++ + F + S
Sbjct: 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 56
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
+ +LI+ V S + G++++LV+N +P +Y+ E+Y + + L V
Sbjct: 57 QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIRTN 193
+K G I+FI+S Y + +A L L+ E + NI
Sbjct: 116 ASQMKKRKSGHIIFITSATPFG----PWKELSTYTSARAGACTLANALSKELGEYNIPVF 171
Query: 194 SVAPWYTKT 202
++ P Y +
Sbjct: 172 AIGPNYLHS 180
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-45
Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 3/195 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK A++TGG GIG+A E A GA + + ++ G V CD
Sbjct: 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P E ++V S F G+ +ILVNN G P E + E++ K N +S + +
Sbjct: 63 VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 121
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P +K +G G I+ ++S + + + Y +TKAA TR LA + KD I N+
Sbjct: 122 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 181
Query: 195 VAPWYTKTSLVERVM 209
+AP +T+ E
Sbjct: 182 IAPSLVRTATTEASA 196
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-45
Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 5/195 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G +AL+TG RGIG+A E GA V + + E G D
Sbjct: 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D + I G L+ILVNN P +E + E Y K+ N T
Sbjct: 63 VTRQDSIDAAIAATVEHA-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTL 121
Query: 135 QLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q + A G G I+ ++S G +IY ATKAA+ LT++ + K I N
Sbjct: 122 QAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181
Query: 194 SVAPWYTKTSLVERV 208
++AP + V
Sbjct: 182 AIAPGVVDGEHWDGV 196
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 1e-45
Identities = 38/193 (19%), Positives = 67/193 (34%), Gaps = 10/193 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVT G A VE L G V + + + + A +
Sbjct: 3 IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF------ESENPGTIALAE 56
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVG---TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ E+L+ ++ +V+N R P S + ++ L Q
Sbjct: 57 QKPERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
L+A+G S++FI+S G + +YG +AA L + A ++D I ++
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175
Query: 196 APWYTKTSLVERV 208
P +
Sbjct: 176 GPNFFNNPTYFPT 188
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-45
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 11/199 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL-------KEWQSKGF 66
L G T +TG +RGIG+A + A GA + ++ K L +E ++ G
Sbjct: 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 67 VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTN 126
+ D Q +++ KF G ++ILVNN T++ + +M N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVN 160
Query: 127 FESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACE 184
TY + P LK S V I+ IS L+ V Y K M+ +A E
Sbjct: 161 TRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE 220
Query: 185 WAKDNIRTNSVAPWYTKTS 203
+ K I N++ P +
Sbjct: 221 F-KGEIAVNALWPKTAIHT 238
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 2e-45
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
M + + S+ L+ A++TGG GIG+ T + GA V + K
Sbjct: 1 MGSTSTPDSSTN-RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNN 59
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNN--VGTNIRKPTIEYSAEE 118
S V+S CD + L+ +K GKL+I+ N V + +E E+
Sbjct: 60 IGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNED 117
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQL 177
+ ++M N + + + ++ + GSIVF +S+ + G +Y ATK A+ L
Sbjct: 118 FKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGL 177
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
T +L E + IR N V+P+ + L+ V
Sbjct: 178 TTSLCTELGEYGIRVNCVSPYIVASPLLTDVF 209
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 2e-45
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 4/198 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGS 71
++G A+VT G+ G+G A+ ELA GA + SRN +L S G V
Sbjct: 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIV 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D P ++L ++ G +ILV + G +E E++ + S
Sbjct: 64 AGDIREPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAV 121
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ + + G G +V+I SV L ++ + + + R LA E A +
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181
Query: 192 TNSVAPWYTKTSLVERVM 209
N+V P T V +
Sbjct: 182 VNAVLPSLILTDRVRSLA 199
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 2e-45
Identities = 46/204 (22%), Positives = 81/204 (39%), Gaps = 4/204 (1%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSG 70
R S+ G L+TG GIG+ T E A L + + N+ L + + + G V
Sbjct: 25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHT 84
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
V D ++ + ++V ++ G ++ILVNN G + K N +
Sbjct: 85 FVVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAH 143
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA---K 187
+ + P + + G IV ++S G V Y ++K A + L E A
Sbjct: 144 FWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQI 203
Query: 188 DNIRTNSVAPWYTKTSLVERVMFS 211
++T + P + T ++ S
Sbjct: 204 TGVKTTCLCPNFVNTGFIKNPSTS 227
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 3e-45
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVH-TCSRNEVELNKCLKEWQSKGFVVSG 70
LK ++ GG + +G T + A V+H +++ NK E + +G V+
Sbjct: 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL 67
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D ++ ++ KL +F GK++I +N VG ++KP +E S E+ + T N +
Sbjct: 68 YQSDLSNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVA 126
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
Y + + +G I+ I++ ++ G S Y KA + TR + E K I
Sbjct: 127 YFFIKQAAKHMNPNG--HIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184
Query: 191 RTNSVAPWYTKTSL 204
N++AP TS
Sbjct: 185 SVNAIAPGPMDTSF 198
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-44
Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 3/194 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ + T V G IG ++ A G V RN +L + E ++ G +
Sbjct: 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
DA + D+ + + L + + NVG N+ P +E + + K+ + +
Sbjct: 64 DARNEDEVTAFLNAA--DAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVS 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR-T 192
+ L+ A G G I F + L + + + K + + +++A E NI
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVA 181
Query: 193 NSVAPWYTKTSLVE 206
+ + T+ V
Sbjct: 182 HLIIDSGVDTAWVR 195
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 2e-44
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G VTG +GIG AT GA V + + + + + V
Sbjct: 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----------EQYPFATEVM 53
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A Q ++ Q + ++ +L+ LVN G T + S E++ + N ++L
Sbjct: 54 DVADAAQVAQVCQRLLAET-ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q + G+IV ++S + S YGA+KAA+ L ++ E A +R N
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCN 172
Query: 194 SVAPWYTKT 202
V+P T T
Sbjct: 173 VVSPGSTDT 181
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 2e-44
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 4/198 (2%)
Query: 15 LKGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSV 72
LKG LVT GIG T GA V +E L + + G V V
Sbjct: 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD S + + LI + K G+L++LVNN G + P ++ + EE+ +++ S
Sbjct: 80 CDVTSTEAVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMR 138
Query: 133 LCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ G IV +SV G S S Y A KA + LTR A E + +R
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVR 198
Query: 192 TNSVAPWYTKTSLVERVM 209
N+V+P + +E+
Sbjct: 199 INAVSPSIARHKFLEKTS 216
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 1e-43
Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 2/195 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
G A+VTGG GIG AT E A GA + ++ L + + + +GF G VC
Sbjct: 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D D+ +L E G ++++ +N G + P + + +++ ++ + + H
Sbjct: 88 DVRHLDEMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHA 146
Query: 134 CQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P L G G I F +S GL YG K + L LA E + I
Sbjct: 147 VEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGV 206
Query: 193 NSVAPWYTKTSLVER 207
+ + P +T LV
Sbjct: 207 SVLCPMVVETKLVSN 221
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 1e-43
Identities = 48/197 (24%), Positives = 79/197 (40%), Gaps = 4/197 (2%)
Query: 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG 65
+ A+VTG +RGIG A LA G VV + + + ++ G
Sbjct: 17 NLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG 76
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125
+ D + P +L F G +++LVNN G E + +++
Sbjct: 77 GKALTAQADVSDPAAVRRLFATAEEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAV 135
Query: 126 NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
N + T++ + L+ G I+ +S+ S IY A KA + +T L+ E
Sbjct: 136 NLKGTFNTLREAAQRLRVGG--RIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKEL 193
Query: 186 AKDNIRTNSVAPWYTKT 202
+I N+VAP T T
Sbjct: 194 RGRDITVNAVAPGPTAT 210
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 2e-43
Identities = 36/194 (18%), Positives = 72/194 (37%), Gaps = 26/194 (13%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
M L+ G + +G A E L V+ R+ ++ D
Sbjct: 3 AMKILLIGASGTLGSAVKERLEKKAEVITA-GRHSGDV-----------------TVDIT 44
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ D +K+ ++VG K++ +V+ G+ P E + E+ + +++ +L L
Sbjct: 45 NIDSIKKMYEQVG-----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLL 99
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
L G S + + + G+ A+ ++ A E + IR N+V+
Sbjct: 100 GIDSLNDKG--SFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVS 156
Query: 197 PWYTKTSLVERVMF 210
P + S + F
Sbjct: 157 PNVLEESWDKLEPF 170
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-43
Identities = 44/198 (22%), Positives = 84/198 (42%), Gaps = 5/198 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---VELNKCLKEWQSKGFVVSG 70
+ A++TG ++GIG LA G V +R++ +++ +
Sbjct: 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D + + I+++ K+ G ++ILVN + + + + KIM N +
Sbjct: 64 LPLDITDCTKADTEIKDIHQKY-GAVDILVNAAAMFMDGS-LSEPVDNFRKIMEINVIAQ 121
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
Y + + V ++K G I ++S G IYG+TK A+ L +L E A I
Sbjct: 122 YGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 191 RTNSVAPWYTKTSLVERV 208
R ++ P + T + ++
Sbjct: 182 RVTTLCPGWVNTDMAKKA 199
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 2e-43
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+ TA VTG + GIG A LA G V+ C+R+ ++ + ++ G V GS CD
Sbjct: 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S D+ + +F G + ILVN+ G N T + ++ ++ TN + +
Sbjct: 82 VTSTDEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVT 140
Query: 135 QLVYPLLK--ASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ V +G G IV I+S GG V + Y A+K + T+++ E AK I
Sbjct: 141 REVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITV 200
Query: 193 NSVAPWYTKTSLVERV 208
N+V P Y +T + ERV
Sbjct: 201 NAVCPGYVETPMAERV 216
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-43
Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 8/197 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L+TG +GIG+A E A V+ SR +L K E +++G +
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + +L + ++ G ++ LVNN G + + E++ M TN + T+
Sbjct: 64 TADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
L Q ++ L++ G I FI+SV SIY +K L + K N+R
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182
Query: 192 TNSVAPWYTKTSLVERV 208
V P T + +V
Sbjct: 183 ITDVQPGAVYTPMWGKV 199
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 2e-43
Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 52/219 (23%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+++G GIG AT + L G + + E+ + D ++
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTA 45
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ R++ I +V +K + ++ LV G + + +++ N+ L
Sbjct: 46 EGRKQAIADVLAKCSKGMDGLVLCAG-------LGPQTKVLGNVVSVNYFGATELMDAFL 98
Query: 139 PLLKASGVGSIVFI----------------------------SSVGGLSHVGSGSIYGAT 170
P LK + V I + V G Y +
Sbjct: 99 PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158
Query: 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
K A+ R A W + +R N++AP T+T L++ +
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL 197
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 4e-43
Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 14/199 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S + LV GG +G V+ V + E E S +V +
Sbjct: 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------ASASVIVKMTDS 56
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYH 132
DQ + ++ K++ ++ G + + + + ++
Sbjct: 57 FTEQADQVTAEVGKLLGD--QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 114
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNI 190
L LK G + + L YG K A++QL ++LA + +
Sbjct: 115 SSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172
Query: 191 RTNSVAPWYTKTSLVERVM 209
+V P T + + M
Sbjct: 173 AAIAVLPVTLDTPMNRKSM 191
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 4e-43
Identities = 62/198 (31%), Positives = 90/198 (45%), Gaps = 5/198 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ ALVTG T GIG L G V C+R E L LKE + G G C
Sbjct: 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D S + E L+ V ++ G +++LVNN G T E + E + ++ TN + +
Sbjct: 79 DVRSVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRV 137
Query: 134 CQLVYPL---LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ V L+ G G IV I+S GG V + Y A+K + T+ L E A+ I
Sbjct: 138 TKQVLKAGGMLER-GTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 196
Query: 191 RTNSVAPWYTKTSLVERV 208
N+V P + +T + V
Sbjct: 197 TVNAVCPGFVETPMAASV 214
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 4e-43
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 16/202 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSV 72
+ G ALVTG +GIG+A E L GA V N +C +
Sbjct: 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD A Q ++V F G+L+ILVNN G N + + + K + N S
Sbjct: 65 CDVADQQQLRDTFRKVVDHF-GRLDILVNNAGVN--------NEKNWEKTLQINLVSVIS 115
Query: 133 LCQLVYPLLKASGVGS---IVFISSVGGLSHVGSGSIYGATKAAMNQLTRN--LACEWAK 187
L + G I+ +SS+ GL V +Y A+K + TR+ LA
Sbjct: 116 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 175
Query: 188 DNIRTNSVAPWYTKTSLVERVM 209
+R N++ P + T+++E +
Sbjct: 176 SGVRLNAICPGFVNTAILESIE 197
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 4e-43
Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 7/208 (3%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
+ F+S A+VTGG RGIG LA G + T + + +
Sbjct: 13 LGTENLYFQSMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIA 72
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG--TNIRKPTIEYSAE 117
E G V D A + + V ++F G+++ LVNN G + +R ++ E
Sbjct: 73 ELSGLGARVIFLRADLADLSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPE 131
Query: 118 EYSKIMTTNFESTYHLCQLVYPLL---KASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174
+ I+ N T Q V + A SI+ I+SV + Y +KA +
Sbjct: 132 NFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGL 191
Query: 175 NQLTRNLACEWAKDNIRTNSVAPWYTKT 202
++ LA A+ I V P ++
Sbjct: 192 AAFSQGLALRLAETGIAVFEVRPGIIRS 219
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 1e-42
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 7/194 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G T LVTG GIG+A ++ A GA + R E L + + +++ V V D
Sbjct: 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P E + E +F G+L+ + + G + E + K++ N ++ +
Sbjct: 61 VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ +L+ GS+V SV GL G Y A K + L R LA E A+ +R N
Sbjct: 120 RKAGEVLEEG--GSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNV 176
Query: 195 VAPWYTKTSLVERV 208
+ P +T + +
Sbjct: 177 LLPGLIQTPMTAGL 190
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 1e-42
Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 4/195 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
A+VTGG +GIG+ E+LA G V + E + + +K ++ D
Sbjct: 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ I E K G ++LVNN G KP +E + E+ +I + N S +
Sbjct: 62 VTDKANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGI 120
Query: 135 QLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q GV G I+ +S+ + S Y TK A+ LT+ A E A N
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180
Query: 194 SVAPWYTKTSLVERV 208
+ AP T + E++
Sbjct: 181 AYAPGIVGTGMWEQI 195
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 2e-42
Identities = 47/204 (23%), Positives = 84/204 (41%), Gaps = 5/204 (2%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
SL+G ALVTG RGIG+ EL G V+ + + + +
Sbjct: 13 YDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVA 72
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ G + + + ++ +E F GKL+I+ +N G + + EE+
Sbjct: 73 AIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEF 131
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLT 178
++ T N + + + Y L+ G ++ + S+ G + ++Y +K A+
Sbjct: 132 DRVFTINTRGQFFVAREAYKHLEIGG--RLILMGSITGQAKAVPKHAVYSGSKGAIETFA 189
Query: 179 RNLACEWAKDNIRTNSVAPWYTKT 202
R +A + A I N VAP KT
Sbjct: 190 RCMAIDMADKKITVNVVAPGGIKT 213
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 2e-42
Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
+ NA ++ R L G ALVTG RGIG A L LGA VV + + + K +
Sbjct: 4 VENASETYIPGR--LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVS 61
Query: 60 EWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA 116
E ++ G + D + KL + + F G L+I V+N G + +
Sbjct: 62 EIKALGSDAIAIK---ADIRQVPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTE 117
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMN 175
EE+ ++ + N + + + Y L G IV SS V S+Y +K A++
Sbjct: 118 EEFDRVFSLNTRGQFFVAREAYRHLTEGG--RIVLTSSNTSKDFSVPKHSLYSGSKGAVD 175
Query: 176 QLTRNLACEWAKDNIRTNSVAPWYTKT 202
R + + I N+VAP T T
Sbjct: 176 SFVRIFSKDCGDKKITVNAVAPGGTVT 202
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 2e-42
Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 3/191 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSV 72
L+G + +VTGGT+GIG+ A GA V R+ +++ C+ + G V G
Sbjct: 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + Q + L +F G ++++ N G P + E+ + I N T++
Sbjct: 67 TDVSDRAQCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFY 125
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNIR 191
Q L ASG G +V SS+ G G S YGATKAA R A E A I
Sbjct: 126 AVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKIT 185
Query: 192 TNSVAPWYTKT 202
N++ P T
Sbjct: 186 VNAIMPGNIMT 196
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 3e-42
Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 2 ANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKE 60
N + SL G TA VTGG+RGIG A + LA GA V T + E
Sbjct: 16 ENLYFQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSE 75
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
+ G D + E+ I+E G L+ILVN+ G P E + ++
Sbjct: 76 IEQAGGRAVAIRADNRDAEAIEQAIRETVEAL-GGLDILVNSAGIWHSAPLEETTVADFD 134
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTR 179
++M NF + + + L G I+ I S + L S+Y A+KAA+ LT+
Sbjct: 135 EVMAVNFRAPFVAIRSASRHLGDGG--RIITIGSNLAELVPWPGISLYSASKAALAGLTK 192
Query: 180 NLACEWAKDNIRTNSVAPWYTKT 202
LA + I N V P T T
Sbjct: 193 GLARDLGPRGITVNIVHPGSTDT 215
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 4e-42
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 5/191 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G AL TG RGIG+ EL GA VV + + + E + G
Sbjct: 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ 77
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + P + L + S F G L+ +++N G + +E + E + K+ N +
Sbjct: 78 ADISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFF 136
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAKDNIR 191
+ Q + G I+ SS+ + ++Y +KAA+ R A + +
Sbjct: 137 VAQQGLKHCRRGG--RIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 194
Query: 192 TNSVAPWYTKT 202
N +AP KT
Sbjct: 195 VNCIAPGGVKT 205
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 141 bits (359), Expect = 4e-42
Identities = 48/193 (24%), Positives = 72/193 (37%), Gaps = 6/193 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +GIG+A L G V N+ E G D +
Sbjct: 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
DQ +++ G +++VNN G P + E K+ N + Q
Sbjct: 64 DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 139 P-LLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
K G I+ S G HVG+ ++Y ++K A+ LT+ A + A I N
Sbjct: 123 EAFKKEGHGGKIINACSQAG--HVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 180
Query: 196 APWYTKTSLVERV 208
P KT + +
Sbjct: 181 CPGIVKTPMWAEI 193
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 4e-42
Identities = 40/201 (19%), Positives = 69/201 (34%), Gaps = 14/201 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L + GIG T EL R E + + ++
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 73 CD-AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + +KL++++ + ++IL+N G I + + + NF
Sbjct: 62 YDVTVPVAESKKLLKKIFDQL-KTVDILINGAG--ILDD------HQIERTIAINFTGLV 112
Query: 132 HLCQLVYPLL---KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + K G I I SV G + + +Y A+KAA+ T +LA
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
+ S+ P T+T LV
Sbjct: 173 GVTAYSINPGITRTPLVHTFN 193
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 6e-42
Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 9/195 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SLK A+VTG T G+G V++L+ V RN L + +
Sbjct: 2 SLKKKIAVVTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAALAEIEGVEPIE-----S 55
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D E + ++ ++ LV+ S E+ + N L
Sbjct: 56 DIVKEVLEEGGVDKL-KNL-DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAEL 113
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ + P L+A+ G +++I+S G +IY A+K A+ L E A + IR +
Sbjct: 114 SRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172
Query: 194 SVAPWYTKTSLVERV 208
+V+P T T +++ +
Sbjct: 173 TVSPGPTNTPMLQGL 187
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 7e-42
Identities = 33/199 (16%), Positives = 70/199 (35%), Gaps = 16/199 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+ +V GG +G A +E G V + + +V G +
Sbjct: 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ-------ADSNILVDG---N 50
Query: 75 AASPDQREKLIQEVGSKFN-GKLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYH 132
+Q + ++++ S +++ + G + + ++ + S+
Sbjct: 51 KNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAI 110
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNI 190
+L LK G + + + S YG KAA++ LT +LA + + DN
Sbjct: 111 AAKLATTHLKPGG--LLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS 168
Query: 191 RTNSVAPWYTKTSLVERVM 209
++ P T + + M
Sbjct: 169 AVLTIMPVTLDTPMNRKWM 187
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 1e-41
Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 10/200 (5%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS 63
E+ + +L L+TG ++ +G L G V+ + + + +
Sbjct: 15 ENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA--- 71
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
+ D + I + ++ L +V+N + + A+ ++++
Sbjct: 72 GAVALY---GDFSCETGIMAFIDLLKTQT-SSLRAVVHNASEWLAET-PGEEADNFTRMF 126
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
+ + + Y + PLL AS V IV IS Y ATKA + LT + A
Sbjct: 127 SVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAA 186
Query: 184 EWAKDNIRTNSVAPWYTKTS 203
+A ++ N +AP
Sbjct: 187 RFA-PLVKVNGIAPALLMFQ 205
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 141 bits (359), Expect = 1e-41
Identities = 51/213 (23%), Positives = 84/213 (39%), Gaps = 19/213 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV----------------HTCSRNEVELNKCL 58
++G A VTG RG G++ LA GA + + +L +
Sbjct: 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68
Query: 59 KEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAE 117
+ + + D D + + + G+L+I+V N G N + S E
Sbjct: 69 DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEE 127
Query: 118 EYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176
++++++ N + + P + A G GSI+ SSVGGL Y A K +
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
L R E + IR NSV P + KT ++
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEG 220
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 2e-41
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 14/198 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVS 69
LKG ALVTG +RGIG+A + LA GA V + E + + E QS G F +
Sbjct: 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG 63
Query: 70 GSVCDAASPDQREKLIQEVGSKFN-----GKLNILVNNVGTNIRKPTIEYSAEEYSKIMT 124
+ S E L + ++ K +IL+NN G E + + + ++++
Sbjct: 64 ---ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVS 120
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
N ++ + + Q L+ + I+ ISS + Y TK A+N +T LA +
Sbjct: 121 VNAKAPFFIIQQALSRLRDNS--RIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQ 178
Query: 185 WAKDNIRTNSVAPWYTKT 202
I N++ P + KT
Sbjct: 179 LGARGITVNAILPGFVKT 196
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 5e-41
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 12/197 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
AL+T GT+G+G+ E+L G V T + + + ++ +
Sbjct: 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFEST 130
D + K+++E S F GK++ L+NN G + + ++Y +E+++++ N +
Sbjct: 64 ADVTKKEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAV 122
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSI----YGATKAAMNQLTRNLACEW 185
+HL +LV P+++ G I+ G I + A K + LT+ +A E
Sbjct: 123 FHLLKLVVPVMRKQNFGRIINYGFQ---GADSAPGWIYRSAFAAAKVGLVSLTKTVAYEE 179
Query: 186 AKDNIRTNSVAPWYTKT 202
A+ I N V P
Sbjct: 180 AEYGITANMVCPGDIIG 196
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 7e-41
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-------------VVHTCSRNEVELNKCLKEW 61
L+G A +TG RG G+A +A GA V + +L++ ++
Sbjct: 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68
Query: 62 QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
++ + +V D D+ K++ + + G+L+I+V N G + + + E++
Sbjct: 69 EAANRRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRD 127
Query: 122 IMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
+M N T++ P + G GSI+ ISS G+ Y A+K A+ L R
Sbjct: 128 VMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA 187
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
A E K +IR NSV P T + M
Sbjct: 188 FAAELGKHSIRVNSVHPGPVNTPMGSGDM 216
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 8e-41
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 5/195 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+TG +RGIG+AT L G V +R+E L E + +
Sbjct: 2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLP----G 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + + + F G+L+ LVNN G + KP E + EE+ ++ TN +
Sbjct: 58 DVREEGDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLG 116
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P L G G+IV + S+ G + G+ Y A+K + L + + N+R
Sbjct: 117 IRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVV 176
Query: 194 SVAPWYTKTSLVERV 208
+V P T
Sbjct: 177 NVLPGSVDTGFAGNT 191
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 2e-40
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 13/209 (6%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
+ +AE + + + L + LVTGGT+GIG+ A GA V +R+ EL+ E
Sbjct: 25 VESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAE 84
Query: 61 WQSKGFV-VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
G V G D + P + V F G L+++ N G + E+
Sbjct: 85 LGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTPEQL 143
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS--GSI----YGATKAA 173
S+++ N + T + Q L ASG G ++ SS+ G G YGA+KAA
Sbjct: 144 SEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSI-----TGPVTGYPGWSHYGASKAA 198
Query: 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKT 202
R A E A + N++ P T
Sbjct: 199 QLGFMRTAAIELAPRGVTVNAILPGNILT 227
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 2e-40
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 15/206 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV------------HTCSRNEVELNKCLKEWQ 62
++G A +TG RG G++ LA GA + +L + +++ +
Sbjct: 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSK 121
+ G + S D D + + + ++ G+L+I++ N + + +
Sbjct: 86 ALGRRIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRD 144
Query: 122 IMTTNFESTYHLCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++ N + ++ P ++ GSIVF SS+GGL + Y A+K ++ L R
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVE 206
+A E NIR N V P T ++
Sbjct: 205 MALELGPRNIRVNIVCPSSVATPMLL 230
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 3e-40
Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 16/193 (8%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M L+TG T G+G A L G + R L + +E ++ D A
Sbjct: 1 MRVLITGATGGLGGAFARALKG--HDLLLSGRRAGALAELAREVGARALP-----ADLAD 53
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
+ + L++E G L++LV+ VG R E + +++ + V
Sbjct: 54 ELEAKALLEEAG-----PLDLLVHAVGKAGRASVREAGRDLVEEMLAAH----LLTAAFV 104
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+ VF + V + Y A K A+ E ++ + V
Sbjct: 105 LKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRL 164
Query: 198 WYTKTSLVERVMF 210
T L +
Sbjct: 165 PAVATGLWAPLGG 177
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 3e-40
Identities = 52/193 (26%), Positives = 77/193 (39%), Gaps = 7/193 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
T +V G R IG+A A GA VV T + + E + G
Sbjct: 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYH 132
D + + E I KF G+++ LV+ G I K E + +++ N S +
Sbjct: 66 DLTNAAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFL 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-YGATKAAMNQLTRNLACEWAKDNIR 191
+ P + G+IV SS G G G++ Y +K A+ TR LA E IR
Sbjct: 125 TAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIR 181
Query: 192 TNSVAPWYTKTSL 204
N+V P T+
Sbjct: 182 VNAVCPGMISTTF 194
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 4e-40
Identities = 52/193 (26%), Positives = 77/193 (39%), Gaps = 13/193 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TALVTG +GIG+A LA GA V N K + D
Sbjct: 4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI---AAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P + L E+ + G ++ILVNN + + + KI+ N T+ +
Sbjct: 61 ISDPGSVKALFAEIQALT-GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVT 119
Query: 135 QLVYPL-LKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDN 189
+ A G ++ I+S +G+ Y A K + TR LA E K N
Sbjct: 120 RAGTDQMRAAGKAGRVISIASNTFF----AGTPNMAAYVAAKGGVIGFTRALATELGKYN 175
Query: 190 IRTNSVAPWYTKT 202
I N+V P ++
Sbjct: 176 ITANAVTPGLIES 188
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 5e-40
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-------------VVHTCSRNEVELNKCLKE 60
SL+G A +TG RG G++ LA GA V + +L++ +
Sbjct: 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
+ +G V D +L+ + +F G+L+++V N G E + E++
Sbjct: 72 VEDQGRKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWD 130
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
++ N T+ + P + +G GSIV +SS GL Y A+K + LT
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVE 206
LA E + IR NS+ P+ +T ++E
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIE 217
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 6e-40
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGS 71
G TA VTGG G+G V +L G V + ++K L +++ G V G
Sbjct: 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D AS + + EV ++F G ++IL NN G N+ +P E S +++ ++ N
Sbjct: 65 QLDVASREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVV 123
Query: 132 HLCQLVYPLLKAS------GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+ P + G +V +S+ GS IY TK A+ L+ +L
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183
Query: 186 AKDNIRTNSVAPWYTKTSLVE 206
K I + + P K+ +
Sbjct: 184 LKYEIGVSVLCPGLVKSYIYA 204
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 8e-40
Identities = 40/211 (18%), Positives = 65/211 (30%), Gaps = 38/211 (18%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+TG GIG A E LA G V R + ++ D ++P
Sbjct: 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADI-----------------EADLSTP 45
Query: 79 DQREKLIQEVGSKF------------------NGKLNILVNNVGTN--IRKPTIEYSAEE 118
RE + V + N L + VN G + + S +
Sbjct: 46 GGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ 105
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
+ + P+++A G + Y +K A+ L
Sbjct: 106 QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT-HLAYAGSKYAVTCLA 164
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
R +WA +R N VAP +T L++
Sbjct: 165 RRNVVDWAGRGVRLNVVAPGAVETPLLQASK 195
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 2e-39
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA------------VVHTCSRNEVELNKCLKEWQ 62
L+G A +TG RG G+ LA GA + + EL + ++ +
Sbjct: 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
+G + D + ++ E ++F G ++ILV+NVG + + + + +++S I
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDI 162
Query: 123 MTTNFESTYHLCQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ TN +H C+ V P +++ GS++F+SS GL S Y A+K + L +L
Sbjct: 163 LQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL 222
Query: 182 ACEWAKDNIRTNSVAPWYTKT 202
A E + NIR NSV P T
Sbjct: 223 ANEVGRHNIRVNSVNPGAVNT 243
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 6e-39
Identities = 54/196 (27%), Positives = 100/196 (51%), Gaps = 15/196 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ ALVTG RGIG+ + LA + V SR + + + E +S G+ SG
Sbjct: 41 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTY 131
D + ++ ++I ++ ++ ++ILVNN G I + + +E+ ++ TN S +
Sbjct: 101 DVSKKEEISEVINKILTEH-KNVDILVNNAG--ITRDNLFLRMKNDEWEDVLRTNLNSLF 157
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
++ Q + ++ G I+ ISS+ GL +G++ Y ++KA + T++LA E A
Sbjct: 158 YITQPISKRMINNRY-GRIINISSIVGL----TGNVGQANYSSSKAGVIGFTKSLAKELA 212
Query: 187 KDNIRTNSVAPWYTKT 202
NI N++AP + +
Sbjct: 213 SRNITVNAIAPGFISS 228
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 8e-39
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
LKG TA+VTG +RG+G+A +L +GA +V S L+ +E+++ G V +
Sbjct: 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D +P+ E +++ F G+++ILVNN G ++ S +++ ++ TN +S Y
Sbjct: 62 GDVKNPEDVENMVKTAMDAF-GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYL 120
Query: 133 LCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAK 187
+ V +LK G I+ I+S+ G+ G+ Y A+KA + T+++A E+A
Sbjct: 121 CTKAVSKIMLKQ-KSGKIINITSIAGI----IGNAGQANYAASKAGLIGFTKSIAKEFAA 175
Query: 188 DNIRTNSVAPWYTKT 202
I N+VAP KT
Sbjct: 176 KGIYCNAVAPGIIKT 190
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 9e-39
Identities = 45/215 (20%), Positives = 79/215 (36%), Gaps = 23/215 (10%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS----K 64
+S + + A++TGG R IG + L G VV +E + + E +
Sbjct: 4 TSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS 63
Query: 65 GFVVSGSVCDAAS-PDQREKLIQEVGSKFNGKLNILVNNVG-----------TNIRKPTI 112
+ G + ++S D E +I F G+ ++LVNN
Sbjct: 64 AVLCKGDLSLSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADA 122
Query: 113 EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-----GSIVFISSVGGLSHVGSGSIY 167
+ + +++ +N + L + G S+V + + +Y
Sbjct: 123 KPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVY 182
Query: 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202
K A+ LTR A E A +IR N+VAP +
Sbjct: 183 TMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLL 217
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 2e-38
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 10/211 (4%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
M E+ + A VTGG G+G A L G V + S ++ L
Sbjct: 9 MGTLEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLM 68
Query: 60 EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ G D A + E+ ++V + F GK+++L+NN G ++ + ++
Sbjct: 69 HERDAGRDFKAYAVDVADFESCERCAEKVLADF-GKVDVLINNAGITRDATFMKMTKGDW 127
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMN 175
+M T+ ++ +++ + + G IV I SV G G+ Y + KA ++
Sbjct: 128 DAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGS----RGAFGQANYASAKAGIH 183
Query: 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206
T+ LA E AK I N+V+P Y T++VE
Sbjct: 184 GFTKTLALETAKRGITVNTVSPGYLATAMVE 214
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 2e-38
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
SL ALVTG +RGIG LA GA V + ++ K + KGF G V
Sbjct: 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
+ + + + E+ ++ ++ILVNN G I + + S +E+ ++ TN S +
Sbjct: 62 NISDIESIQNFFAEIKAEN-LAIDILVNNAG--ITRDNLMMRMSEDEWQSVINTNLSSIF 118
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
+ + ++K G I+ I SV G +G+ Y A KA + +++LA E A
Sbjct: 119 RMSKECVRGMMKKRW-GRIISIGSVVGS----AGNPGQTNYCAAKAGVIGFSKSLAYEVA 173
Query: 187 KDNIRTNSVAPWYTKT 202
NI N VAP + T
Sbjct: 174 SRNITVNVVAPGFIAT 189
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 2e-38
Identities = 34/189 (17%), Positives = 69/189 (36%), Gaps = 8/189 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
++TG + G+G + G + R+E +L+ + D AS
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYR---ARDLASH 59
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
+ E+L +++ + +V++ G+ E E+ ++ N S ++ + +
Sbjct: 60 QEVEQLFEQLD----SIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
K ++V I S S Y A K A+ L ++ E ++ +V P
Sbjct: 116 KRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPG 174
Query: 199 YTKTSLVER 207
T E
Sbjct: 175 GMATEFWET 183
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-38
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L ALVTG +RGIG+A ELA GA V + + ++ + + G
Sbjct: 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + E L V ++ G+L++LVNN G + +++ ++ N +
Sbjct: 85 ADVSQESEVEALFAAVIERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 133 LCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAK 187
+ +LK G I+ I+SV G G+ Y A KA + LT+ +A E A
Sbjct: 144 CSRAAAKIMLKQRS-GRIINIASVVGE----MGNPGQANYSAAKAGVIGLTKTVAKELAS 198
Query: 188 DNIRTNSVAPWYTKT 202
I N+VAP + T
Sbjct: 199 RGITVNAVAPGFIAT 213
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 3e-38
Identities = 47/224 (20%), Positives = 80/224 (35%), Gaps = 23/224 (10%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59
+ S ++ A+VTG + IG+A +L G VV +
Sbjct: 7 HHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLAD 66
Query: 60 EWQS----KGFVVSGSVCDAAS-PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY 114
E V + ++ P E++I F G+ ++LVNN P ++
Sbjct: 67 ELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQG 125
Query: 115 SAE----------EYSKIMTTNFESTYHLCQLVYPLLKASGV------GSIVFISSVGGL 158
E + ++++ TN + + L K + SIV +
Sbjct: 126 DHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVD 185
Query: 159 SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202
+ S+Y K A+ LT++ A E A IR N VAP +
Sbjct: 186 QPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLL 229
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 3e-38
Identities = 63/196 (32%), Positives = 96/196 (48%), Gaps = 15/196 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L A+VTG +RGIG+A ELA GA+V + E ++ G G+V
Sbjct: 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
+ + L++ +F G LN+LVNN G I + + +E+ ++ TN ++ +
Sbjct: 85 NVNDATAVDALVESTLKEF-GALNVLVNNAG--ITQDQLAMRMKDDEWDAVIDTNLKAVF 141
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
L + V P++KA G G IV I+SV G +G+ Y A KA + +TR LA E
Sbjct: 142 RLSRAVLRPMMKARG-GRIVNITSVVGS----AGNPGQVNYAAAKAGVAGMTRALAREIG 196
Query: 187 KDNIRTNSVAPWYTKT 202
I N VAP + T
Sbjct: 197 SRGITVNCVAPGFIDT 212
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 4e-38
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK 64
+ + A VTGG GIG + + L G VV C N K L++ ++
Sbjct: 2 AHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL 61
Query: 65 GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMT 124
GF S + D ++ +V ++ G++++LVNN G + + E++ ++
Sbjct: 62 GFDFYASEGNVGDWDSTKQAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVID 120
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRN 180
TN S +++ + V + G G I+ ISSV G G Y KA ++ T +
Sbjct: 121 TNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ----KGQFGQTNYSTAKAGIHGFTMS 176
Query: 181 LACEWAKDNIRTNSVAPWYTKT 202
LA E A + N+V+P Y T
Sbjct: 177 LAQEVATKGVTVNTVSPGYIGT 198
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 4e-38
Identities = 51/194 (26%), Positives = 76/194 (39%), Gaps = 7/194 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
LVTGG+RGIG A A G V + N + + G
Sbjct: 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + V +F G+L+ LVNN G + + E S E +++ N +
Sbjct: 84 DVGNAADIAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSIL 142
Query: 133 LCQLVYPLL---KASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + G+IV +SS L Y A+KAA++ T LA E A +
Sbjct: 143 CAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAE 202
Query: 189 NIRTNSVAPWYTKT 202
IR N+V P +T
Sbjct: 203 GIRVNAVRPGIIET 216
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 4e-38
Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEV---------ELNKCLKEWQ 62
+G TAL+TGG RG+G++ LA GA + C ++V +L + + +
Sbjct: 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
G + D E + E G ++I + N G + E + ++ ++
Sbjct: 68 KTGRRCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEV 126
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ TN T++ V P + G IV +SS+ G S + + Y ++K + LT+ A
Sbjct: 127 IGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA 186
Query: 183 CEWAKDNIRTNSVAPWYTKT 202
+ I N+VAP +T
Sbjct: 187 HDLVGYGITVNAVAPGNIET 206
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 6e-38
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
LK L+TG GIG+AT+E A GA + C E L + + + V
Sbjct: 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV-----VM 56
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A P E+ E + G+L+ +V+ G + E++ ++ N ++ +
Sbjct: 57 DVADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLV 115
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ ++ GSIV +S L ++G + Y A+ A + LTR LA E + IR N
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLGNLGQAN-YAASMAGVVGLTRTLALELGRWGIRVN 174
Query: 194 SVAPWYTKT 202
++AP + +T
Sbjct: 175 TLAPGFIET 183
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 8e-38
Identities = 62/194 (31%), Positives = 98/194 (50%), Gaps = 12/194 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
LKG ALVTG +RGIG+A +LA GA VV + NE + N+ + E + G
Sbjct: 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A+ + ++++ F G+++ILVNN G + EE+ ++ TN + +
Sbjct: 62 DVANAEDVTNMVKQTVDVF-GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLC 120
Query: 134 CQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKD 188
+ V +++ G IV I+SV G+ +G+ Y A KA + LT+ A E A
Sbjct: 121 TKAVSRFMMRQRH-GRIVNIASVVGV----TGNPGQANYVAAKAGVIGLTKTSAKELASR 175
Query: 189 NIRTNSVAPWYTKT 202
NI N++AP + T
Sbjct: 176 NITVNAIAPGFIAT 189
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 1e-37
Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 12/189 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV----ELNKCLKEWQSKGFVVS 69
LK ALVTGG GIG+A A GA V E ++ ++E K ++
Sbjct: 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFE 128
G D + L+ + G L+IL G P I+ ++E++ + N
Sbjct: 107 G---DLSDESFARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVF 162
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + + Q PLL SI+ SS+ Y ATKAA+ +R LA + A+
Sbjct: 163 ALFWITQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220
Query: 189 NIRTNSVAP 197
IR N VAP
Sbjct: 221 GIRVNIVAP 229
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 2e-37
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQSKGFVVSG 70
LKG L+TGG GIG+A A GA + E E + +++ K ++ G
Sbjct: 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPG 104
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFES 129
D + + ++QE + G LNILVNNV + +E +AE+ K N S
Sbjct: 105 ---DLSDEQHCKDIVQETVRQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFS 160
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--YGATKAAMNQLTRNLACEWAK 187
+H+ + LK I+ +S+ G+ ++ Y ATK A+ TR+L+ +
Sbjct: 161 YFHVTKAALSHLKQGD--VIINTASIVAYE--GNETLIDYSATKGAIVAFTRSLSQSLVQ 216
Query: 188 DNIRTNSVAP 197
IR N VAP
Sbjct: 217 KGIRVNGVAP 226
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 2e-37
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 16/196 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ALVTG +RGIG++ +LA G V + ++ + ++E ++KG
Sbjct: 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
+ A D+ + +I+EV S+F G L++LVNN G I + + +E+ ++ TN + +
Sbjct: 62 NVADADEVKAMIKEVVSQF-GSLDVLVNNAG--ITRDNLLMRMKEQEWDDVIDTNLKGVF 118
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
+ Q +L+ G+I+ +SSV G G+ Y ATKA + LT++ A E A
Sbjct: 119 NCIQKATPQMLRQRS-GAIINLSSVVGA----VGNPGQANYVATKAGVIGLTKSAARELA 173
Query: 187 KDNIRTNSVAPWYTKT 202
I N+VAP + +
Sbjct: 174 SRGITVNAVAPGFIVS 189
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 129 bits (328), Expect = 2e-37
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS---- 69
L+ ALVTG GIG+A LAG GA V C + + ++ G
Sbjct: 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63
Query: 70 ---GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMT 124
D + L+++V + F+ +++V+ G I + + S +++ K++
Sbjct: 64 NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAG--ITQDEFLLHMSEDDWDKVIA 121
Query: 125 TNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTR 179
N + T+ + Q L+ GSI+ ISS+ G G++ Y A+KA + LT+
Sbjct: 122 VNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK----VGNVGQTNYAASKAGVIGLTQ 177
Query: 180 NLACEWAKDNIRTNSVAPWYTKT 202
A E + IR NSV P + T
Sbjct: 178 TAARELGRHGIRCNSVLPGFIAT 200
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 4e-37
Identities = 58/212 (27%), Positives = 82/212 (38%), Gaps = 22/212 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA------------VVHTCSRNEVELNKCLKEWQ 62
L G A +TG RG G+A LA GA V EL +K +
Sbjct: 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
G + D + +Q + G+L+I+V N G I + + + +
Sbjct: 71 DIGSRIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAG--I--APMSAGDDGWHDV 125
Query: 123 MTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSI----YGATKAAMNQL 177
+ N YH ++ P L G GSIV ISS GL+ VGS Y A K + L
Sbjct: 126 IDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGL 185
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
R A A IR NS+ P +T ++
Sbjct: 186 MRVYANLLAGQMIRVNSIHPSGVETPMINNEF 217
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 129 bits (327), Expect = 5e-37
Identities = 44/215 (20%), Positives = 75/215 (34%), Gaps = 28/215 (13%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV------------HTCSRNEVELNKCLKEWQ 62
++ LVTGG RG G++ +LA GA + +L + E +
Sbjct: 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67
Query: 63 SKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKI 122
G + D + + ++F GKL+++V N G I + ++
Sbjct: 68 KTGRKAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAG--ICPLGAHLPVQAFADA 124
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI-----------YGATK 171
+F + P L + SI+ SV GL Y K
Sbjct: 125 FDVDFVGVINTVHAALPYLTSGA--SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182
Query: 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206
++ T LA + A +IR N + P T ++
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLN 217
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 6e-37
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTG T G G+ G V R + L + E ++ D +
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA---QLDVRN 57
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
E+++ + +++ ++ILVNN G + +P + S E++ ++ TN + ++ +
Sbjct: 58 RAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRA 116
Query: 137 VYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVA 196
V P + G I+ I S G G++YGATKA + Q + NL + +R +
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176
Query: 197 P 197
P
Sbjct: 177 P 177
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-36
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L+G +LVTG TRGIG+A E+LA G+ V+ T + E + G G
Sbjct: 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFEST 130
+ S + K +E+ + ++ILVNN G I + + S ++ +++ N T
Sbjct: 64 MNLLSEESINKAFEEIYNLV-DGIDILVNNAG--ITRDKLFLRMSLLDWEEVLKVNLTGT 120
Query: 131 YHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEW 185
+ + Q ++K G IV ISSV G +G++ Y TKA + T++LA E
Sbjct: 121 FLVTQNSLRKMIKQRW-GRIVNISSVVGF----TGNVGQVNYSTTKAGLIGFTKSLAKEL 175
Query: 186 AKDNIRTNSVAPWYTKT 202
A N+ N+VAP + +T
Sbjct: 176 APRNVLVNAVAPGFIET 192
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-36
Identities = 61/196 (31%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L+G ALVTG +RGIG+A E LA GA V + +E G +
Sbjct: 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGM---AL 62
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
+ +P+ E +++ + +F G ++ILVNN G I + + EE+S IM TN S +
Sbjct: 63 NVTNPESIEAVLKAITDEF-GGVDILVNNAG--ITRDNLLMRMKEEEWSDIMETNLTSIF 119
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
L + V ++K G I+ + SV G G+ Y A KA + T+++A E A
Sbjct: 120 RLSKAVLRGMMKKRQ-GRIINVGSVVGT----MGNAGQANYAAAKAGVIGFTKSMAREVA 174
Query: 187 KDNIRTNSVAPWYTKT 202
+ N+VAP + +T
Sbjct: 175 SRGVTVNTVAPGFIET 190
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 1e-36
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 12/190 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
+VTG +RGIG+A L G V+ +R+ + K+ ++ G D +
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
E +++ + G ++++VNN G I ++ +++ N + Q
Sbjct: 63 EADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 138 Y-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIRT 192
++K G I+ I+SV GL G+I Y A KA + ++ A E A NI
Sbjct: 122 TKIMMKKRK-GRIINIASVVGL----IGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176
Query: 193 NSVAPWYTKT 202
N V P + +
Sbjct: 177 NVVCPGFIAS 186
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-36
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 2/197 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+L+G AL+TG + GIG+AT LA GA V +R +L E + G V
Sbjct: 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLEL 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A + + G L+ILVNN G + P + ++++++ TN ++
Sbjct: 64 DVADRQGVDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYM 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P L G++V +SS+ G +V + ++Y ATK +N + L E + +R
Sbjct: 123 TRAALPHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVV 181
Query: 194 SVAPWYTKTSLVERVMF 210
+ P T T L +
Sbjct: 182 VIEPGTTDTELRGHITH 198
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-36
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 20/205 (9%)
Query: 19 TALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ L+TG RG+G V+ L L + T RN + + L++ + D
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 81
Query: 76 ASPDQREKLIQEVGSKF-NGKLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYHL 133
+ D +KL+ ++ + LN+L NN G + I ++E + TN L
Sbjct: 82 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141
Query: 134 CQLVYPLLKAS-----------GVGSIVFISSVGG---LSHVGSGSIYGATKAAMNQLTR 179
+ PLLK + G +I+ +SS+ G + G Y +K+A+N T+
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSL 204
+L+ + I S+ P + KT +
Sbjct: 202 SLSVDLYPQRIMCVSLHPGWVKTDM 226
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 3e-36
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G ALVTG T GIG+A GA+V E +L + + FV
Sbjct: 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVF---SA 80
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ + ++L + + ++ILVNN G + +++ ++ N + L
Sbjct: 81 NLSDRKSIKQLAEVAEREM-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTL 139
Query: 134 CQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKD 188
+ + +++ G I+ I+S+ G+ G+ Y A KA + ++ LA E A
Sbjct: 140 TRELIHSMMRRRY-GRIINITSIVGV----VGNPGQTNYCAAKAGLIGFSKALAQEIASR 194
Query: 189 NIRTNSVAPWYTKT 202
NI N +AP + K+
Sbjct: 195 NITVNCIAPGFIKS 208
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-36
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 5/189 (2%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-WQSKGFVVSGSVCDA 75
A++TG +RGIG+A LA G + +R+ L K E Q +G V D
Sbjct: 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
+ + E+ ++V +F G ++++V N G K E S EE+ +++ N + +
Sbjct: 62 SKAESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLK 120
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSV 195
LK +G ++V S V G Y +TK A L R E ++R +
Sbjct: 121 AFLDSLKRTGGLALVTTSDVSARLIPY-GGGYVSTKWAARALVRTFQIE--NPDVRFFEL 177
Query: 196 APWYTKTSL 204
P T
Sbjct: 178 RPGAVDTYF 186
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 1e-35
Identities = 42/228 (18%), Positives = 79/228 (34%), Gaps = 40/228 (17%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG----FVV 68
+ ALVTG + +G++ E L G V R+ E N ++ V
Sbjct: 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65
Query: 69 SGSVCDAASP--------------DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY 114
+ + A+ + +L+ + + G+ ++LVNN + P +
Sbjct: 66 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 124
Query: 115 SAEEY--------------SKIMTTNFESTYHLCQLVYPLLKASGV------GSIVFISS 154
+ + + + +N + Y L + + + SI+ +
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184
Query: 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202
+ +IY K A+ LTR+ A E A IR N V P +
Sbjct: 185 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 232
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 124 bits (315), Expect = 1e-35
Identities = 51/206 (24%), Positives = 83/206 (40%), Gaps = 26/206 (12%)
Query: 4 AESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS 63
++ + ++ + LVTGG RGIG A + LA G V R
Sbjct: 2 TATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF----- 56
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSK 121
G D D ++ V G + +LV+N G + + + E++ K
Sbjct: 57 ------GVEVDVTDSDAVDRAFTAVEEHQ-GPVEVLVSNAG--LSADAFLMRMTEEKFEK 107
Query: 122 IMTTNFESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQ 176
++ N + + Q + + G ++FI SV GL G Y A+KA +
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKF-GRMIFIGSVSGL----WGIGNQANYAASKAGVIG 162
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKT 202
+ R++A E +K N+ N VAP Y T
Sbjct: 163 MARSIARELSKANVTANVVAPGYIDT 188
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 3e-35
Identities = 47/210 (22%), Positives = 79/210 (37%), Gaps = 8/210 (3%)
Query: 1 MANAESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60
MA+ + R ++TG + GIG+A + G + +R L L
Sbjct: 1 MASMTGGQQMGR-GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-LNL 58
Query: 61 WQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
D + I + G + +VNN G + A E+
Sbjct: 59 --PNTLCA---QVDVTDKYTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQ 112
Query: 121 KIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN 180
++ N + Q V +KA G+I+ ISS+ G + Y TK A++ ++ N
Sbjct: 113 RMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISEN 172
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVMF 210
+ E A N+R ++AP KT L+
Sbjct: 173 VREEVAASNVRVMTIAPSAVKTELLSHTTS 202
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 3e-35
Identities = 42/228 (18%), Positives = 79/228 (34%), Gaps = 40/228 (17%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG----FVV 68
+ ALVTG + +G++ E L G V R+ E N ++ V
Sbjct: 43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102
Query: 69 SGSVCDAASP--------------DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY 114
+ + A+ + +L+ + + G+ ++LVNN + P +
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRN 161
Query: 115 SAEEY--------------SKIMTTNFESTYHLCQLVYPLLKASGV------GSIVFISS 154
+ + + + +N + Y L + + + SI+ +
Sbjct: 162 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 221
Query: 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202
+ +IY K A+ LTR+ A E A IR N V P +
Sbjct: 222 AMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 269
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 4e-35
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+ L+TG + GIG+ EL GA + +R + + E + G V D
Sbjct: 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
Q + G++++LVNN G P +E+ +++ N +
Sbjct: 62 VTDRHSVAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGI 120
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
V P+++A G I+ I S+G LS V + ++Y ATK A+ ++ L E NIR
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTC 178
Query: 195 VAPWYTKTSL 204
V P ++ L
Sbjct: 179 VNPGVVESEL 188
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 5e-35
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 20/191 (10%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
++ LV +RGIG+A + L+ GA V C+RNE L + + VC
Sbjct: 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VC 66
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
D K + + K +++ILV N G K E + E++ + + + F +
Sbjct: 67 DL------RKDLDLLFEKV-KEVDILVLNAG--GPKAGFFDELTNEDFKEAIDSLFLNMI 117
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ + P +K G G IV I+S +S + + + + A+ + L+ E A I
Sbjct: 118 KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGIT 177
Query: 192 TNSVAPWYTKT 202
N VAP +T+T
Sbjct: 178 VNCVAPGWTET 188
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 7e-35
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 25/206 (12%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAV--VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
+ +VTG RGIG V++L + + +R+ + + S+ V+
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLP---LTVT 61
Query: 77 SPDQREKLIQEVGSKFNG-KLNILVNNVGTNIRKPTI-EYSAEEYSKIMTTNFESTYHLC 134
+ + +VG L++L+NN G + T E + ++ + N S L
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 135 QLVYPLLKASGV-----------GSIVFISS-VGGLSHVGSGS------IYGATKAAMNQ 176
Q + PLLK + +++ ISS +G ++ SGS Y +KAA+N
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKT 202
R LA + DN+ + P + +T
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQT 207
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 122 bits (310), Expect = 9e-35
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G T+L+TG + GIG A L LG+ V NE +L + + VC
Sbjct: 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE---VC 67
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ A+ ++ LI + L+ILV N G I +++ K++ N ++ + L
Sbjct: 68 NLANKEECSNLISKT-----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 134 CQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKD 188
+ +++ G I+ ISS+ G+ +G+ Y A+KA + +T++L+ E A
Sbjct: 123 NREAIKKMIQKRY-GRIINISSIVGI----AGNPGQANYCASKAGLIGMTKSLSYEVATR 177
Query: 189 NIRTNSVAPWYTKT 202
I N+VAP + K+
Sbjct: 178 GITVNAVAPGFIKS 191
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 3e-34
Identities = 51/194 (26%), Positives = 77/194 (39%), Gaps = 4/194 (2%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
SS R S T +TG T G G+A A G + R E L L S
Sbjct: 10 SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA-LAGELSAK 68
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMT 124
V D + + +F L L+NN G + P +++ ++
Sbjct: 69 TRVLPLTLDVRDRAAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVD 127
Query: 125 TNFESTYHLCQLVYPLLKASGVGS-IVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
TN + + +L+ P L A G G+ IV + SV G +YG TKA + Q + NL C
Sbjct: 128 TNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRC 187
Query: 184 EWAKDNIRTNSVAP 197
+ +R ++ P
Sbjct: 188 DLQGTGVRVTNLEP 201
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 6e-34
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAA 76
AL+TG +RGIG+A LA G + +N + + +E + +G +V+ +
Sbjct: 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ L+ + G L+ LVNN G + E++ ++ N + + +
Sbjct: 63 EAEAATALVHQAAEVL-GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTRE 121
Query: 137 VY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWAKDNIR 191
++KA G IV I+SV G+ G+ Y A+KA + TR +A E+A+ I
Sbjct: 122 AVKLMMKARF-GRIVNITSVVGI----LGNPGQANYVASKAGLIGFTRAVAKEYAQRGIT 176
Query: 192 TNSVAPWYTKT 202
N+VAP + +T
Sbjct: 177 VNAVAPGFIET 187
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 9e-34
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 7/203 (3%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHT---CSRNEVELNKCLKEWQ 62
S + + L T L+TG + GIG+AT E +R +L + K
Sbjct: 22 SQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTID 81
Query: 63 SK--GFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEY 119
+ V + D ++ + I+ + +F ++ILVNN G + + + E+
Sbjct: 82 QEFPNAKVHVAQLDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDI 140
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
+ TN + ++ Q V P+ +A G IV + S+ G +GSIY A+K A+ T
Sbjct: 141 QDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTD 200
Query: 180 NLACEWAKDNIRTNSVAPWYTKT 202
+L E IR +AP +T
Sbjct: 201 SLRKELINTKIRVILIAPGLVET 223
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 1e-33
Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 11/211 (5%)
Query: 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
+ RW + ALVTG + GIG A L G V C+R + + E +S G
Sbjct: 23 ARPGMERW--RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG 80
Query: 66 F--VVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
+ + CD ++ + + + S+ ++I +NN G + S + +
Sbjct: 81 YPGTLIPYRCDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMF 139
Query: 124 TTNFESTYHLCQLVYPLLKASGVGS--IVFISSVGGLSHV--GSGSIYGATKAAMNQLTR 179
N + + Y +K V I+ I+S+ G + Y ATK A+ LT
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTE 199
Query: 180 NLACEW--AKDNIRTNSVAPWYTKTSLVERV 208
L E A+ +IR ++P +T ++
Sbjct: 200 GLRQELREAQTHIRATCISPGVVETQFAFKL 230
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 1e-33
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S + LVTGG RGIG A A G V R+ L C
Sbjct: 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL-----------AVKC 66
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTY 131
D +Q E+ +E+ G + +L+ N G + K + S E+++ ++ TN T+
Sbjct: 67 DITDTEQVEQAYKEIEETH-GPVEVLIANAG--VTKDQLLMRMSEEDFTSVVETNLTGTF 123
Query: 132 HLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACEWA 186
+ + +L+A G +V ISSV GL GS Y A+KA + R+LA E
Sbjct: 124 RVVKRANRAMLRAKK-GRVVLISSVVGL----LGSAGQANYAASKAGLVGFARSLARELG 178
Query: 187 KDNIRTNSVAPWYTKT 202
NI N VAP + T
Sbjct: 179 SRNITFNVVAPGFVDT 194
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-32
Identities = 47/206 (22%), Positives = 82/206 (39%), Gaps = 17/206 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+G +A+V+GG G+G+ATV L G V + E G +
Sbjct: 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTN 84
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI-----EYSAEEYSKIMTTNFES 129
S D I+ +V + G + + + ++K +
Sbjct: 85 VTSEDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143
Query: 130 TYHLCQLVYPLLKASGV------GSIVFISSVGGLS-HVGSGSIYGATKAAMNQLTRNLA 182
TY++ +LV + A+ G++V +S+ G +G + Y A KA + LT A
Sbjct: 144 TYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTA-YAAAKAGVIGLTIAAA 202
Query: 183 CEWAKDNIRTNSVAPWYTKTSLVERV 208
+ + IR N++AP KT ++E V
Sbjct: 203 RDLSSAGIRVNTIAPGTMKTPIMESV 228
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 4e-32
Identities = 50/195 (25%), Positives = 74/195 (37%), Gaps = 27/195 (13%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G A+VTG RGIG E A GA V +L + +
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL-----T 265
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG-----TNIRKPTIEYSAEEYSKIMTTNF 127
D + D +K+ V GK++ILVNN G + + ++ N
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLAN-----MDEKRWDAVIAVNL 320
Query: 128 ESTYHLCQLVY-PLLKASGVGSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLA 182
+ L + + G G ++ +SS+ G+ +G+ Y TKA M L LA
Sbjct: 321 LAPQRLTEGLVGNGTIGEG-GRVIGLSSMAGI----AGNRGQTNYATTKAGMIGLAEALA 375
Query: 183 CEWAKDNIRTNSVAP 197
A I N+VAP
Sbjct: 376 PVLADKGITINAVAP 390
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-31
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 4/191 (2%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
LVTG + G G+A E G V +R L+ + + + +S D
Sbjct: 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS---LDVTDG 63
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
++ + + +V +++ G++++LVNN G E + E + + L + +
Sbjct: 64 ERIDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
P ++ G GS+V ISS GG S Y ATKAA+ QL+ LA E A I+ V P
Sbjct: 123 PQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG 182
Query: 199 YTKTSLVERVM 209
+T+L +
Sbjct: 183 AFRTNLFGKGA 193
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 5e-31
Identities = 54/237 (22%), Positives = 87/237 (36%), Gaps = 49/237 (20%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
S ALVTGG +GIG A V +L L V +R+ +++ Q++G
Sbjct: 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D L + ++ G L++LVNN G + + M TNF T
Sbjct: 61 LDIDDLQSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 119
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS--------------------------- 165
+C + PL+K G +V +SS+ + + S S
Sbjct: 120 VCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVED 177
Query: 166 --------------IYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSL 204
YG TK + L+R A + ++ D I N+ P + +T +
Sbjct: 178 TKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 6e-31
Identities = 46/208 (22%), Positives = 80/208 (38%), Gaps = 22/208 (10%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK +VTG + G+G A LA GA V + E G V D
Sbjct: 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNAD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI----EYSAEEYSKIMTTNFEST 130
+ + +F G ++ LVN GT + + ++ + +++ + N T
Sbjct: 62 VTNEADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGT 120
Query: 131 YHLCQLVYPLLKASGV------GSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRN 180
+++ +L ++ G IV +S+ G I Y A+K + LT
Sbjct: 121 FNMIRLAAEVMSQGEPDADGERGVIVNTASIAAF----DGQIGQAAYAASKGGVAALTLP 176
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERV 208
A E A+ IR ++AP T ++ +
Sbjct: 177 AARELARFGIRVVTIAPGIFDTPMMAGM 204
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-30
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 24/211 (11%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S+KG+ A++TGG G+G AT E L G GA K+ G +
Sbjct: 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPA 65
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY------SAEEYSKIMTTNF 127
D S + + KF G++++ VN G + T + E++ +++ N
Sbjct: 66 DVTSEKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124
Query: 128 ESTYHLCQLVYPLLKASGV------GSIVFISSVGGLSHVGSGSI----YGATKAAMNQL 177
T+++ +LV + + G I+ +SV G + Y A+K + +
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF----EGQVGQAAYSASKGGIVGM 180
Query: 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208
T +A + A IR ++AP T L+ +
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGTPLLTSL 211
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-30
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 7/197 (3%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-----WQSKGFVVSGSVC 73
L+TG + G G+ T E LAG G V+ R+ V N E + +
Sbjct: 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D S ++ I ++ + G++++L++N G + P ++ E+++++ N ST +
Sbjct: 67 DVQSQVSVDRAIDQIIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125
Query: 134 CQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ P ++ G +++ISS + Y A KAAM+ + A E ++ I T
Sbjct: 126 NRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIET 185
Query: 193 NSVAPWYTKTSLVERVM 209
+ + P +
Sbjct: 186 SIIVPGAFTSGTNHFAH 202
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 8e-28
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 15/198 (7%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKE 60
+S G LVTG G+G+A A GA+V + +K ++E
Sbjct: 2 ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61
Query: 61 WQSKGFVVSGS-VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119
+ +G G V + S + EKL++ F G+++++VNN G + S E++
Sbjct: 62 IRRRG----GKAVANYDSVEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDW 116
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTR 179
I + ++ + + + +K G I+ +S G+ + Y A K + L
Sbjct: 117 DIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLAN 176
Query: 180 NLACEWAKDNIRTNSVAP 197
L E K+NI N++AP
Sbjct: 177 TLVIEGRKNNIHCNTIAP 194
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-27
Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 28/210 (13%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
++ A+VTGG G+G AT + L GA V ++ L G + D
Sbjct: 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAAD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI----EYSAEEYSKIMTTNFEST 130
+ + G L I+VN GT + +S + KI+ N +
Sbjct: 61 VTDEAAVASALDLAET--MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGS 118
Query: 131 YHLCQLV-------YPLLKASGV-GSIVFISSVGGLSHVGSGSI----YGATKAAMNQLT 178
+++ +L P+ + G I+ +SV G I Y A+K + +T
Sbjct: 119 FNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF----DGQIGQAAYSASKGGVVGMT 174
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERV 208
+A + A IR ++AP T L+ +
Sbjct: 175 LPIARDLASHRIRVMTIAPGLFDTPLLASL 204
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 1e-27
Identities = 52/266 (19%), Positives = 87/266 (32%), Gaps = 78/266 (29%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV-VSGSV 72
K A+VTGG +GIG ++L+ G +V R+ + ++ +++ ++ V
Sbjct: 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68
Query: 73 CDAASPDQ-REKLIQEVGSKFNGKLNILVNNVG--------------------------- 104
D P L + + F GKL+ILVNN G
Sbjct: 69 LDVTDPIATMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVK 127
Query: 105 ---TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV 161
+ + + E + + N+ + +++ PLL+ S IV +SS G
Sbjct: 128 IYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKY 187
Query: 162 GSGSI-------------------------------------------YGATKAAMNQLT 178
S Y +KA +N T
Sbjct: 188 VSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSL 204
R LA + + N V P KT +
Sbjct: 248 RVLANKI--PKFQVNCVCPGLVKTEM 271
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-27
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKEW 61
S K ++TG G+G+ E A LGA V + N + + E
Sbjct: 2 SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61
Query: 62 QSKG---FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEE 118
G +V D +K+++ F G +++++NN G + + ++
Sbjct: 62 VKNGGVAVADYNNVLDG------DKIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKD 114
Query: 119 YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLT 178
Y ++ + + + + +P + G IV SS GL + Y + K+A+
Sbjct: 115 YKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFA 174
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
LA E AK NI+ N++AP ++ + E +M
Sbjct: 175 ETLAKEGAKYNIKANAIAPL-ARSRMTESIM 204
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 4e-24
Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV-ELNKCLKEWQSKG---FVV 68
LK L+TG G+G+ + A GA VV N+ + K + E ++ G +
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVV-----NDFKDATKTVDEIKAAGGEAWPD 374
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
V + E +I+ V K+ G ++ILVNN G + + S +E+ + +
Sbjct: 375 QHDVAKDS-----EAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLI 428
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
T++L +L +P G I+ I+S G+ + Y ++KA + L++ +A E AK+
Sbjct: 429 GTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKN 488
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
NI+ N VAP + +T++ +M
Sbjct: 489 NIKVNIVAP-HAETAMTLSIM 508
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-27
Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 7 SFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKC 57
S + G A+VTG G+G+ A GA V ++ +
Sbjct: 9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIV 68
Query: 58 LKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY 114
+ E + G SV D K+I+ F G+++ILVNN G + ++
Sbjct: 69 VDEIRKAGGEAVADYNSVIDG------AKVIETAIKAF-GRVDILVNNAGILRDRSLVKT 121
Query: 115 SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174
S ++++ + + + ++ Q +P +K G I+ SS G+ Y A K +
Sbjct: 122 SEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGL 181
Query: 175 NQLTRNLACEWAKDNIRTNSVAP 197
L +A E A++N+ N + P
Sbjct: 182 IGLANTVAIEGARNNVLCNVIVP 204
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 102 bits (255), Expect = 3e-26
Identities = 43/205 (20%), Positives = 78/205 (38%), Gaps = 11/205 (5%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA----VVHTCSRNE---VELNKCLKEWQSKGFVVSGS 71
L+TG + GIG LA + V T R+ L + + +
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATL-RDLKTQGRLWEAARALACPPGSLETL 62
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + V G++++LV N G + P + + ++ N T
Sbjct: 63 QLDVRDSKSVAAARERV---TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTV 119
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ Q P +K G G ++ SVGGL + +Y A+K A+ L +LA +
Sbjct: 120 RMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH 179
Query: 192 TNSVAPWYTKTSLVERVMFSNLSLI 216
+ + T+ +E+V+ S ++
Sbjct: 180 LSLIECGPVHTAFMEKVLGSPEEVL 204
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 1e-25
Identities = 50/204 (24%), Positives = 76/204 (37%), Gaps = 25/204 (12%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVV----------HTCSRNEVELNKCLKEWQS 63
+ G +VTG GIG+A A GA V + + + E +
Sbjct: 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
G + A DQ LIQ F G L++LVNN G + S EE+ ++
Sbjct: 84 AGGEAVADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVI 142
Query: 124 TTNFESTYHLCQLVYPLLKASGV------GSIVFISSVGGLSHVGSGSI----YGATKAA 173
+ + + + + G I+ SS GL GS+ Y A KA
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ----GSVGQGNYSAAKAG 198
Query: 174 MNQLTRNLACEWAKDNIRTNSVAP 197
+ LT A E + + N++AP
Sbjct: 199 IATLTLVGAAEMGRYGVTVNAIAP 222
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 2e-25
Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 32/204 (15%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+ALVTGG G+G+A L G V E + +V D
Sbjct: 4 SALVTGGASGLGRAAALALKARGYRVVVLDLRR-EGEDLI-------YV----EGDVTRE 51
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI----EYSAEEYSKIMTTNFESTYHLC 134
+ + + + L +V+ G + + + + E + +++ N T+++
Sbjct: 52 EDVRRAVARAQEE--APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109
Query: 135 QLVYPLLKASGV------GSIVFISSVGGLSHVGSGSI----YGATKAAMNQLTRNLACE 184
+L ++ + G IV +SV G I Y A+K + LT A E
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAF----EGQIGQAAYAASKGGVVALTLPAARE 165
Query: 185 WAKDNIRTNSVAPWYTKTSLVERV 208
A IR +VAP T L++ +
Sbjct: 166 LAGWGIRVVTVAPGLFDTPLLQGL 189
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 67.2 bits (164), Expect = 1e-13
Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 21/175 (12%)
Query: 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
K++ S+KG A+V GT +G + LAG GA V C R + + F V
Sbjct: 111 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKV 169
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
+ + + A R + ++ + + + + +
Sbjct: 170 NVTAAETADDASRAEAVKGA--------HFVFTAGAIGLE----LLPQAAWQNESSIEIV 217
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS---GSI-YGATKAAMNQLTR 179
+ Y+ P L G+ + GG G+ G + +A + +L
Sbjct: 218 ADYNAQ----PPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFE 268
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 1e-11
Identities = 45/222 (20%), Positives = 77/222 (34%), Gaps = 49/222 (22%)
Query: 11 SRWS------LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS 63
+ W+ T ++TG G+G T ELA GA V+ R+ + +
Sbjct: 4 TGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAV-RDTRKGEAAARTMAG 62
Query: 64 KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIM 123
+ V D ++ + ++L+NN G I + + + +
Sbjct: 63 Q---VEVRELDLQDLSS----VRRFADGVS-GADVLINNAG--IMAVPYALTVDGFESQI 112
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI----------------- 166
TN + L L+ P L +V +SS+ H G I
Sbjct: 113 GTNHLGHFALTNLLLPRLTD----RVVTVSSMA---HW-PGRINLEDLNWRSRRYSPWLA 164
Query: 167 YGATKAAM----NQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204
Y +K A ++L R L A +R + P Y+ T+L
Sbjct: 165 YSQSKLANLLFTSELQRRL--TAAGSPLRALAAHPGYSHTNL 204
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 8e-08
Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 34/163 (20%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV--VHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L+ G T G+ ++ + + V +R + + +
Sbjct: 2 HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHP----------RLDNP 51
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
V + E+ + +G ++ +GT I++ S E + + +
Sbjct: 52 VGP----------LAELLPQLDGSIDTAFCCLGTTIKEAG---SEEAFRAV-------DF 91
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174
L V G + +S++G + S Y K +
Sbjct: 92 DLPLAVGKRALEMGARHYLVVSALG--ADAKSSIFYNRVKGEL 132
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 3e-07
Identities = 40/193 (20%), Positives = 69/193 (35%), Gaps = 18/193 (9%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L G ALV G R I E A + A+ + R E K +
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEV-ALSYQAERLRPEAEKLAEALGGALLFR 64
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
D ++ + L V F G L+ LV+ + + I+ +++ +
Sbjct: 65 ----ADVTQDEELDALFAGVKEAF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALE 119
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S + + PLL+ G IV ++ V ++ KAA+ R LA E
Sbjct: 120 VSAYSLVAVARRAEPLLREGG--GIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYE 177
Query: 185 WAKDNIRTNSVAP 197
+R N+++
Sbjct: 178 LGPKGVRVNAISA 190
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 48.3 bits (115), Expect = 4e-07
Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 32/178 (17%)
Query: 1 MANAESSFKSSR-WSLKGMTALVTGGTRG-IGQATVEELAGLGAV--VHTCSRNEVELNK 56
MA E+ K + ++ + + G + G G+ ++E+ G V R ++ ++
Sbjct: 1 MAETEALSKLREDFRMQNKSVFILGAS-GETGRVLLKEILEQGLFSKVTLIGRRKLTFDE 59
Query: 57 CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSA 116
V+ V D D Q ++ +GT K A
Sbjct: 60 ------EAYKNVNQEVVDFEKLDDYASAFQGH--------DVGFCCLGTTRGKA----GA 101
Query: 117 EEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174
E + ++ L KA G +SS G + S +Y K +
Sbjct: 102 EGFVRV-------DRDYVLKSAELAKAGGCKHFNLLSSKG--ADKSSNFLYLQVKGEV 150
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-07
Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 23/196 (11%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+G AL+TG R GI ++ E A L A + + E + + K + S VV
Sbjct: 19 LEGKRALITGVANERSIAYGIAKSFHREGAQL-AFTYATPKLEKRVREIAKGFGSD-LVV 76
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD + + + L + + + G L+I+V+++ + I+ S E + M
Sbjct: 77 K---CDVSLDEDIKNLKKFLEENW-GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMD 132
Query: 125 TNFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
S Y L + + PL++ G+IV +S G V ++ G KAA+ R L
Sbjct: 133 I---SVYSLIALTRELLPLMEGRN-GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYL 188
Query: 182 ACEWAKDNIRTNSVAP 197
A + AK R N+++
Sbjct: 189 AYDIAKHGHRINAISA 204
|
| >4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 5e-07
Identities = 39/193 (20%), Positives = 79/193 (40%), Gaps = 16/193 (8%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+ T ++ G R G+ + + A L + R+ EL K L++ +
Sbjct: 30 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKL-VFTYRKERSRKELEKLLEQLNQPEAHL 88
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
D S ++ +++G G ++ + +++ ++R E S E +
Sbjct: 89 YQ--IDVQSDEEVINGFEQIGKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQD 145
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S + L+ G SIV + +GG V + ++ G KA++ + LA +
Sbjct: 146 ISSYSLTIVAHEAKKLMPEGG--SIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALD 203
Query: 185 WAKDNIRTNSVAP 197
DNIR N+++
Sbjct: 204 LGPDNIRVNAISA 216
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-06
Identities = 39/195 (20%), Positives = 77/195 (39%), Gaps = 21/195 (10%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVE--LNKCLKEWQSKGFVVSG 70
L G L+TG + I + + GA + + + + K E+ V+
Sbjct: 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPA-AVLP- 81
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEY-SAEEYSKIMTT 125
CD S + + L E+G + L+ +V+++ + I+ + E +S
Sbjct: 82 --CDVISDQEIKDLFVELGKVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDI 138
Query: 126 NFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
S Y L + ++K S+V ++ +G + S + G KA++ R A
Sbjct: 139 ---SAYSFAALAKEGRSMMKNRN-ASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTA 194
Query: 183 CEWAKDNIRTNSVAP 197
+D I+ N+V+
Sbjct: 195 LALGEDGIKVNAVSA 209
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 3e-06
Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 24/196 (12%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
LKG L+ G + GI Q+ + A L A + E + +E S +V
Sbjct: 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATL-AFTYLNESLEKRVRPIAQELNSP-YVY 61
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
D + + + L V G L+ +V++V + +E S ++ M
Sbjct: 62 E---LDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAME 117
Query: 125 TNFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
S Y L + PLL S++ +S +G ++ ++ G KAA+ R L
Sbjct: 118 I---SVYSLIELTNTLKPLLNNGA--SVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYL 172
Query: 182 ACEWAKDNIRTNSVAP 197
A + K +IR N+++
Sbjct: 173 AVDLGKHHIRVNALSA 188
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 6e-06
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 18/193 (9%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+G L+ G R GI +A E A L A + + + +E +
Sbjct: 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAEL-AFTYQGDALKKRVEPLAEELGAF-VAG 86
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD A + + + + K+ GKL+ LV+ +G + I+ S ++ M
Sbjct: 87 H---CDVADAASIDAVFETLEKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTML 142
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S + + L+ G SI+ ++ G + + ++ G KAA+ + LA +
Sbjct: 143 ISVYSLTAVSRRAEKLMADGG--SILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVD 200
Query: 185 WAKDNIRTNSVAP 197
NIR N+++
Sbjct: 201 LGPQNIRVNAISA 213
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 6e-06
Identities = 36/193 (18%), Positives = 80/193 (41%), Gaps = 18/193 (9%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
++G ++ G + GI +A + A + A+ + + ++ + K V
Sbjct: 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEV-ALTYLSETFKKRVDPLAESLGVK-LTV 85
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD + + + + + + ++ G L+ +V+ V ++ ++ S + M
Sbjct: 86 P---CDVSDAESVDNMFKVLAEEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMH 141
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S ++ PL+ G SI+ +S G V ++ G KAA+ + LA +
Sbjct: 142 ISCYSFTYIASKAEPLMTNGG--SILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVD 199
Query: 185 WAKDNIRTNSVAP 197
K IR N+++
Sbjct: 200 LGKQQIRVNAISA 212
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 7e-06
Identities = 35/193 (18%), Positives = 79/193 (40%), Gaps = 16/193 (8%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L+G +V G R GI ++ E A L + R E +++ ++
Sbjct: 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARL-IFTYAGERLEKSVHELAGTLDRNDSII 63
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEYSAEEYSKIMT 124
CD + + E + + G ++ + + + + + + + +
Sbjct: 64 LP--CDVTNDAEIETCFASIKEQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHN 120
Query: 125 TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
+ S + + P++ G SIV ++ +GG + + ++ G KA+++ + LA +
Sbjct: 121 ISSYSLTAVVKAARPMMTEGG--SIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAAD 178
Query: 185 WAKDNIRTNSVAP 197
K+NIR NS++
Sbjct: 179 LGKENIRVNSISA 191
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 1e-05
Identities = 35/194 (18%), Positives = 75/194 (38%), Gaps = 19/194 (9%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L G LVTG GI QA E A L A + + + + + + S +
Sbjct: 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAEL-AFTYQNDKLKGRVEEFAAQLGSDIVLQ 65
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIE-YSAEEYSKIM 123
CD A + + E+G + K + V+++G + + + E +
Sbjct: 66 ----CDVAEDASIDTMFAELGKVW-PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH 120
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
+ S + + +L +++ +S +G + + ++ G KA++ R +A
Sbjct: 121 DISSYSFVAMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMAN 178
Query: 184 EWAKDNIRTNSVAP 197
+ +R N+++
Sbjct: 179 AMGPEGVRVNAISA 192
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 2e-05
Identities = 38/255 (14%), Positives = 72/255 (28%), Gaps = 65/255 (25%)
Query: 19 TALVTGGTRGIGQATVEELA-GLGAVVHTCSRNEVELNKCL------------KEWQSKG 65
LV G + G G A+ A G GA + K ++ G
Sbjct: 63 KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG 122
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGT-------------------- 105
DA S R ++I+ + ++ G+++++V ++ +
Sbjct: 123 LYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIG 182
Query: 106 --------NIRKPTIE-------YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIV 150
+ K TI + E I + + + V
Sbjct: 183 QTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSV 242
Query: 151 FISSVGG---LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT----- 202
S +G G++ G K +++ + L AK N T
Sbjct: 243 AFSYIGTEITWPIYWHGAL-GKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAA 301
Query: 203 --------SLVERVM 209
S+V ++M
Sbjct: 302 IPVMPLYISMVYKIM 316
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 42.9 bits (101), Expect = 4e-05
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSVC 73
+ ++TGG G G + L GA +V T SR+ + + ++EW+ +G V S
Sbjct: 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLT-SRSGIRTGYQARQVREWRRQGVQVLVSTS 1944
Query: 74 DAASPDQREKLIQEV 88
+A+S D LI E
Sbjct: 1945 NASSLDGARSLITEA 1959
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 5e-05
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 19/194 (9%)
Query: 15 LKGMTALVTG--GTR----GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
L G L+TG R GI +A E A L A + R + + + E+ S+ V
Sbjct: 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAEL-AFTYVGDRFKDRITEFAAEFGSE-LVF 69
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG----TNIRKPTIEY-SAEEYSKIM 123
CD A Q + L + + + L+ LV+++G I ++ + E +
Sbjct: 70 P---CDVADDAQIDALFASLKTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAH 125
Query: 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC 183
+ S L + P+L S++ +S +G + + + G KAA+ R LA
Sbjct: 126 DISAYSFPALAKAALPMLSDDA--SLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAV 183
Query: 184 EWAKDNIRTNSVAP 197
+R N+++
Sbjct: 184 SLGAKGVRVNAISA 197
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 6e-05
Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 5 ESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK 64
S +GM LV G + + + EL G RNE + + L+E
Sbjct: 9 HHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRERG-A 66
Query: 65 GFVVSGSVCDAASP 78
+V ++ + S
Sbjct: 67 SDIVVANLEEDFSH 80
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 2e-04
Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 41/171 (23%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
LVTG +G+ E LA + ++ + L V + DA +
Sbjct: 7 LVTGAAGQLGRVMRERLAPMAEILR------LADLSPLDPAGPNEECVQCDLADA---NA 57
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
++ + +V+ G ++ KP + +I+ N Y+L +
Sbjct: 58 VNAMVAGC--------DGIVHLGGISVEKP--------FEQILQGNIIGLYNLYEAA--- 98
Query: 141 LKASGVGSIVFISS---VGGLSHVGS---------GSIYGATKAAMNQLTR 179
+A G IVF SS +G +YG +K L R
Sbjct: 99 -RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLAR 148
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 2e-04
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 19 TALVTGGTRGIGQATVEELAG-LGA---VVHTCSRNEV---ELNKCLKEWQSKGFVVSGS 71
T LVTGGT +G L G V+ SR + + + + G VS
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVL--VSRRGPAASGAAELVAQLTAYGAEVSLQ 589
Query: 72 VCDAASPDQREKLIQEV 88
CD A + K++ +
Sbjct: 590 ACDVADRETLAKVLASI 606
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 2e-04
Identities = 42/204 (20%), Positives = 71/204 (34%), Gaps = 38/204 (18%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
L G LV+G I GA +V T + + +K ++
Sbjct: 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLE-- 62
Query: 72 VCDAASPDQREKLIQEVGSKF--NGKLNILV--------NNVGTNIRKPTIEYSAEEYSK 121
D + + L V KL+ +V +G N P + + SK
Sbjct: 63 -LDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGIN---PFFDAPYADVSK 118
Query: 122 IMTTNFESTY---HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI--Y---GATKAA 173
+ S Y + + + P++ G SIV G+ S ++ Y K+A
Sbjct: 119 GIHI---SAYSYASMAKALLPIMNPGG--SIV------GMDFDPSRAMPAYNWMTVAKSA 167
Query: 174 MNQLTRNLACEWAKDNIRTNSVAP 197
+ + R +A E K +R+N VA
Sbjct: 168 LESVNRFVAREAGKYGVRSNLVAA 191
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 3e-04
Identities = 20/174 (11%), Positives = 44/174 (25%), Gaps = 42/174 (24%)
Query: 17 GMTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ V G T G +G + G + R ++ + L + + + D
Sbjct: 13 HVKYAVLGAT-GLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LAYLEPE--CRVAEMLDH 68
Query: 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQ 135
A E+ ++ + + R+ + + + T
Sbjct: 69 AG---LERALRGLDGVIF-----SAGYYPSRPRRW---------QEEVASALGQTNPFYA 111
Query: 136 LVYPLLKASGVGSIVFISSVGGLSHVGSGSI----------------YGATKAA 173
+ V I+++ S + G Y K A
Sbjct: 112 AC----LQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWA 161
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 5e-04
Identities = 14/60 (23%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
+ G T G T+ + G V R+ L + VV G V AA
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-PSEGPRPAH--VVVGDVLQAAD 60
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 39.5 bits (92), Expect = 6e-04
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 14 SLKGMTALVTGGTRG-IGQATVEELAGLGA-VVHTCSR 49
+ K L+TG +G IG ++ L GA VV T SR
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR 510
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 218 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.97 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.97 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.97 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.97 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.97 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.96 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.96 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.95 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.94 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.93 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.92 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.92 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.92 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.92 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.92 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.91 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.91 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.91 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.91 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.91 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.91 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.9 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.9 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.9 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.9 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.9 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.9 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.9 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.89 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.89 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.89 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.89 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.89 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.89 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.89 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.89 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.89 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.89 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.89 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.88 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.88 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.88 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.88 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.87 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.87 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.87 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.87 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.87 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.87 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.87 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.87 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.87 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.87 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.87 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.86 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.86 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.86 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.86 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.86 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.85 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.85 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.85 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.85 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.85 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.85 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.84 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.84 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.84 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.84 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.83 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.83 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.83 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.83 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.82 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.81 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.81 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.8 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.79 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.79 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.77 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.76 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.76 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.75 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.75 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.74 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.71 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.7 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.7 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.69 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.68 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.67 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.66 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.65 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.64 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.62 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.62 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.45 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.41 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.35 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.14 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 99.02 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.95 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.87 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.85 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.76 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.67 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.63 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.63 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.62 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.61 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.6 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.56 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.49 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.47 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.43 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.42 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.41 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.41 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.41 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.39 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.36 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.35 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.35 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.34 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.34 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.33 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.27 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.22 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.2 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.2 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.15 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.11 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.1 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.08 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.08 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.07 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.06 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.05 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 98.02 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.01 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.95 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.95 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.93 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 97.91 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.91 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.87 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.87 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.87 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.81 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.76 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.72 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.72 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.71 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.7 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.69 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.66 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.66 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.65 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.65 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.65 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.63 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.62 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.56 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.55 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.48 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.48 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.46 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.45 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.43 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.38 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.36 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.34 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.32 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.31 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.31 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 97.31 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.31 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.26 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.24 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.22 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.18 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.17 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.17 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.13 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.12 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.11 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.11 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.07 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.04 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.02 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.02 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 97.0 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.97 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.95 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.94 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.94 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.93 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 96.9 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.88 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.88 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.87 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.86 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 96.85 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.85 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.85 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.85 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.81 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.79 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.78 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.78 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.78 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.74 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.73 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.73 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.73 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 96.73 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.72 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.72 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.72 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.69 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.67 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.65 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 96.65 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.63 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.63 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.62 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.6 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.6 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.58 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.57 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.57 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.57 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 96.53 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.52 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 96.52 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 96.51 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.5 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 96.47 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.45 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.45 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.45 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.42 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 96.4 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.38 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 96.37 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.37 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.35 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.35 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 96.32 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.31 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.31 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.26 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.26 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.22 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.21 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.19 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.17 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.17 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.16 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.15 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 96.15 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 96.15 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.15 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 96.1 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 96.08 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.06 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.04 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.03 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 96.02 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 96.02 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 95.97 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 95.92 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 95.89 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 95.87 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 95.86 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 95.81 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 95.8 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 95.79 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 95.78 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 95.76 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-50 Score=320.95 Aligned_cols=194 Identities=27% Similarity=0.385 Sum_probs=185.3
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++..+++|++|.++++++++++.+++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 37899999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
|++|++|||||... ..++.+.+.++|++.+++|+.|+++++|+++|+|.+++.|+||++||.++..+.++..+|+++|
T Consensus 83 -G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asK 161 (254)
T 4fn4_A 83 -SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAK 161 (254)
T ss_dssp -SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHH
Confidence 79999999999764 4678899999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|+.+|+|+|+.|++++|||||+|+||+|+|||.+.
T Consensus 162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~ 197 (254)
T 4fn4_A 162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLG 197 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTS
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccccc
Confidence 999999999999999999999999999999998643
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-50 Score=319.39 Aligned_cols=198 Identities=30% Similarity=0.419 Sum_probs=188.8
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++...+.++..+++|++|.++++++++++.++
T Consensus 4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-CCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ |++|++|||||.....++.+.+.++|++.+++|+.|+++++|+++|+|.+ ++.|+||++||.++..+.++..+|++|
T Consensus 84 ~-G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~as 162 (255)
T 4g81_D 84 G-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAA 162 (255)
T ss_dssp T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred C-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHH
Confidence 9 79999999999998899999999999999999999999999999999965 466899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
|+|+.+|+|+|+.||+++|||||+|+||+|+|||.+....
T Consensus 163 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~ 202 (255)
T 4g81_D 163 KGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE 202 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC
Confidence 9999999999999999999999999999999999987653
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=307.25 Aligned_cols=190 Identities=27% Similarity=0.377 Sum_probs=174.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. .++..+++|++|.++++++++++.+++
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g---~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 101 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG---GGAVGIQADSANLAELDRLYEKVKAEA- 101 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CCeEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999999988877763 457788999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
|++|++|+|||.....++.+.+.++|++.+++|+.|+++++|+++|+|+++ |+||+++|.++..+.++..+|+++|+|
T Consensus 102 G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~--G~IInisS~~~~~~~~~~~~Y~asKaa 179 (273)
T 4fgs_A 102 GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG--SSVVLTGSTAGSTGTPAFSVYAASKAA 179 (273)
T ss_dssp SCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC--CeEEEEeehhhccCCCCchHHHHHHHH
Confidence 799999999999888899999999999999999999999999999999653 799999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+.+|+++|+.||+++|||||+|+||+|+|||+++..
T Consensus 180 v~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~ 215 (273)
T 4fgs_A 180 LRSFARNWILDLKDRGIRINTLSPGPTETTGLVELA 215 (273)
T ss_dssp HHHHHHHHHHHTTTSCEEEEEEEECSBCC-------
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhh
Confidence 999999999999999999999999999999976653
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-47 Score=302.90 Aligned_cols=192 Identities=27% Similarity=0.320 Sum_probs=173.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++||++|||||++|||+++|++|+++|++|++++|+.+..+ ..+++...+.++..+++|++|.++++++++++.+++
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999999887654 334455556778899999999999999999999999
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||.....+ .+.+.++|++.+++|+.++++++|+++|+|++++ |+||++||.++..+.++..+|++||+
T Consensus 82 -G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKa 158 (258)
T 4gkb_A 82 -GRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKG 158 (258)
T ss_dssp -SCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCC-ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHH
Confidence 79999999999865444 5789999999999999999999999999997664 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+.+|+|+++.|++++|||||+|+||+|+|||.+..
T Consensus 159 av~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~ 194 (258)
T 4gkb_A 159 AQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNW 194 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhh
Confidence 999999999999999999999999999999998764
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-47 Score=300.28 Aligned_cols=190 Identities=31% Similarity=0.389 Sum_probs=173.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++||++|||||++|||+++|++|+++|++|++++|+.+ ++..+.+...+.++..+++|++|.++++++++
T Consensus 4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~----- 76 (247)
T 4hp8_A 4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT----- 76 (247)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----
T ss_pred CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence 36899999999999999999999999999999999999865 34455666677889999999999999877663
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|++|||||.....++.+.+.++|++.+++|+.|+++++|+++|+|.++ +.|+||++||..+..+.++..+|++|
T Consensus 77 ~-g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~as 155 (247)
T 4hp8_A 77 D-AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAA 155 (247)
T ss_dssp T-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred h-CCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHH
Confidence 3 689999999999888899999999999999999999999999999999765 46999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++.+|+|+++.||+++|||||+|+||+|+|||.+...
T Consensus 156 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~ 194 (247)
T 4hp8_A 156 KHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALR 194 (247)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc
Confidence 999999999999999999999999999999999998764
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-46 Score=293.58 Aligned_cols=186 Identities=22% Similarity=0.279 Sum_probs=171.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+||||||++|||+++|++|+++|++|++++|+++.+++..+ ....+..+++|++|.++++++++++.+++ |++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~----~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~i 76 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK----ERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRI 76 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT----TCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 5899999999999999999999999999999999887665443 34568889999999999999999999999 799
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|++|||||.....++.+.+.++|++.+++|+.|+++++|.++|+|.+++ |+||++||..+..+.++..+|++||+|+.+
T Consensus 77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ 155 (247)
T 3ged_A 77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVA 155 (247)
T ss_dssp CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence 9999999998888999999999999999999999999999999998875 999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+|+|+.|+++ |||||+|+||+++|++.+...
T Consensus 156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~ 187 (247)
T 3ged_A 156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT 187 (247)
T ss_dssp HHHHHHHHHTT-TSEEEEEEECSBCCCC---CC
T ss_pred HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH
Confidence 99999999997 999999999999999987654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=295.26 Aligned_cols=190 Identities=23% Similarity=0.302 Sum_probs=171.6
Q ss_pred ccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 9 ~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
....++++||++|||||++|||+++|++|+++|++|++++|+.++. ......+++|+++.++++++++++
T Consensus 3 m~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~ 72 (261)
T 4h15_A 3 MIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEAT 72 (261)
T ss_dssp CCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHH
T ss_pred chhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999976531 112346789999999999999999
Q ss_pred HhhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-CCc
Q 027816 89 GSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGS 165 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~-~~~ 165 (218)
.+++ |++|++|||||... .+++.+.+.++|++.+++|+.++++++|+++|+|.+++.|+||++||..+..+.+ +..
T Consensus 73 ~~~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~ 151 (261)
T 4h15_A 73 RQRL-GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTT 151 (261)
T ss_dssp HHHT-SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCH
T ss_pred HHHc-CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccH
Confidence 9999 79999999999753 3578899999999999999999999999999999998889999999999998876 578
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
.|++||+|+.+|+++|+.|++++|||||+|+||+|+|||.++..
T Consensus 152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~ 195 (261)
T 4h15_A 152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLA 195 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhh
Confidence 99999999999999999999999999999999999999987653
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-46 Score=292.28 Aligned_cols=181 Identities=31% Similarity=0.489 Sum_probs=161.0
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
|+||++|||||++|||+++|++|+++|++|++++|+.+.++. .....+..+++|++|.+++++++++ + |
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~----~-g 77 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFEA----L-P 77 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHHH----C-S
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHHh----c-C
Confidence 589999999999999999999999999999999999876542 2345688899999999999887764 5 7
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|++|||||.. .++.+.+.++|++.+++|+.|+++++|+++|+|++++ |+||++||.++..+.++...|++||+++
T Consensus 78 ~iDiLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav 154 (242)
T 4b79_A 78 RLDVLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAI 154 (242)
T ss_dssp CCSEEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred CCCEEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHH
Confidence 999999999975 3567889999999999999999999999999998754 9999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
.+|+|+|+.||+++|||||+|+||+|+|||.+...
T Consensus 155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~ 189 (242)
T 4b79_A 155 VQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLK 189 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCC-----C
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhccc
Confidence 99999999999999999999999999999987653
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-44 Score=285.12 Aligned_cols=196 Identities=32% Similarity=0.444 Sum_probs=184.9
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..++++||++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+..+..+++|++|.++++++++++.+
T Consensus 6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD 85 (256)
T ss_dssp CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999998888888877778899999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++ +++|+||||||.....++ +.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|++|
T Consensus 86 ~~-g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 163 (256)
T 3gaf_A 86 QF-GKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS 163 (256)
T ss_dssp HH-SCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence 99 699999999998877777 8999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+++++|+++++.|+++.|||||+|+||+++|++.+..
T Consensus 164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 201 (256)
T 3gaf_A 164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV 201 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc
Confidence 99999999999999999999999999999999998754
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=284.21 Aligned_cols=197 Identities=27% Similarity=0.350 Sum_probs=184.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-C-CCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-K-GFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~-~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. . ...+..+++|++|.++++++++++.
T Consensus 3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999988888777765 2 3358899999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+.+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++...|++
T Consensus 83 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 161 (265)
T 3lf2_A 83 RTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSA 161 (265)
T ss_dssp HHH-CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHH
Confidence 999 7999999999998888899999999999999999999999999999999888899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+|+++++|+++++.|++++|||||+|+||+++|||.+...
T Consensus 162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 201 (265)
T 3lf2_A 162 ARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRF 201 (265)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhh
Confidence 9999999999999999999999999999999999988764
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-44 Score=287.09 Aligned_cols=197 Identities=28% Similarity=0.441 Sum_probs=186.5
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+++|++|.++++++++++.+.
T Consensus 21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999888888777778999999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..+.++...|+++|
T Consensus 101 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK 179 (271)
T 4ibo_A 101 G-IDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK 179 (271)
T ss_dssp T-CCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred C-CCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence 8 799999999999887888899999999999999999999999999999988789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++++|+++++.|++++|||||+|+||+++|+|.+...
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 217 (271)
T 4ibo_A 180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALI 217 (271)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcc
Confidence 99999999999999999999999999999999987653
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=283.91 Aligned_cols=196 Identities=30% Similarity=0.411 Sum_probs=183.5
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
++++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ ..+..+++|++|.++++++++++.
T Consensus 4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999888888876654 678999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~ 168 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+. .+.++...|+
T Consensus 84 ~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 162 (262)
T 3pk0_A 84 EEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG 162 (262)
T ss_dssp HHH-SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH
T ss_pred HHh-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH
Confidence 999 69999999999988888899999999999999999999999999999998888999999999886 7888999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+||+++++|+++++.|++++|||||+|+||+++|++.+.
T Consensus 163 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 201 (262)
T 3pk0_A 163 ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLE 201 (262)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccc
Confidence 999999999999999999999999999999999998754
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=283.46 Aligned_cols=194 Identities=20% Similarity=0.166 Sum_probs=176.4
Q ss_pred CCccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+++++||++|||||+| |||+++|++|+++|++|++++|+++.+++..+.+.+. +.++..+++|+++.++++++++++
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3678999999999876 9999999999999999999999999888887777654 457889999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC
Q 027816 89 GSKFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~ 164 (218)
.+++ |++|++|||||.... .++.+.+.++|...+++|+++++.+++.+.+++++ .|+||++||.++..+.++.
T Consensus 81 ~~~~-G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~ 157 (256)
T 4fs3_A 81 GKDV-GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNY 157 (256)
T ss_dssp HHHH-CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTT
T ss_pred HHHh-CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccc
Confidence 9999 799999999997643 34567899999999999999999999999887754 4899999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
..|++||+|+.+|+++|+.||+++|||||+|+||+++|||.+..
T Consensus 158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~ 201 (256)
T 4fs3_A 158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGV 201 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTC
T ss_pred hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhc
Confidence 99999999999999999999999999999999999999998643
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=281.37 Aligned_cols=195 Identities=19% Similarity=0.252 Sum_probs=173.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+++|++|.++++++++++.++
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 3578999999999999999999999999999999999999999888888777788999999999999999999999888
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|++||+
T Consensus 82 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 160 (252)
T 3h7a_A 82 -APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKF 160 (252)
T ss_dssp -SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHH
T ss_pred -CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHH
Confidence 5899999999998878888999999999999999999999999999999887899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEE-EEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRT-NSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v-~~v~PG~v~t~~~~~~~ 209 (218)
++++|+++++.|+++.|||| |+|+||+++|+|.+...
T Consensus 161 a~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~ 198 (252)
T 3h7a_A 161 GLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR 198 (252)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEC------------
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc
Confidence 99999999999999999999 99999999999988754
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=284.18 Aligned_cols=197 Identities=29% Similarity=0.411 Sum_probs=183.6
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. .+..+..+++|++|.++++++++++.
T Consensus 14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 34578899999999999999999999999999999999999998888777755 46679999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||.++..+.++...|+
T Consensus 94 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 172 (266)
T 4egf_A 94 EAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYC 172 (266)
T ss_dssp HHH-TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred HHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHH
Confidence 999 7999999999998878888999999999999999999999999999998765 58999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++|+++++|+++++.|+++.|||||+|+||+++|+|.+..
T Consensus 173 asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 212 (266)
T 4egf_A 173 TSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRV 212 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh
Confidence 9999999999999999999999999999999999998765
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-43 Score=284.03 Aligned_cols=194 Identities=25% Similarity=0.340 Sum_probs=180.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC------------hhhHHHHHHHhhhCCCeEEEEEeeCCCHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAASPD 79 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 79 (218)
+.+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+.+...+..+..+++|++|.+
T Consensus 5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 84 (281)
T 3s55_A 5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA 84 (281)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence 446889999999999999999999999999999999997 55566666666666778999999999999
Q ss_pred HHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC
Q 027816 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS 159 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~ 159 (218)
+++++++++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..
T Consensus 85 ~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 163 (281)
T 3s55_A 85 ALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHS 163 (281)
T ss_dssp HHHHHHHHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcC
Confidence 9999999999999 699999999999888888999999999999999999999999999999888789999999999999
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+.++...|+++|+++++|+++++.|++++|||||+|+||+++|||.+
T Consensus 164 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 210 (281)
T 3s55_A 164 ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTH 210 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTS
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcccc
Confidence 99999999999999999999999999999999999999999999875
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=284.61 Aligned_cols=198 Identities=27% Similarity=0.429 Sum_probs=181.6
Q ss_pred ccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-------------ChhhHHHHHHHhhhCCCeEEEEEeeC
Q 027816 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-------------NEVELNKCLKEWQSKGFVVSGSVCDA 75 (218)
Q Consensus 9 ~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~D~ 75 (218)
...+.+++||++|||||++|||+++|++|+++|++|++++| +.+.+++..+.+...+..+..+++|+
T Consensus 7 ~~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 86 (280)
T 3pgx_A 7 AGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV 86 (280)
T ss_dssp ----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred hccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC
Confidence 33455789999999999999999999999999999999988 67777777777777778899999999
Q ss_pred CCHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEec
Q 027816 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISS 154 (218)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss 154 (218)
+|.++++++++++.+++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||
T Consensus 87 ~~~~~v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS 165 (280)
T 3pgx_A 87 RDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSS 165 (280)
T ss_dssp TCHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcc
Confidence 99999999999999999 6999999999998878888999999999999999999999999999998764 689999999
Q ss_pred CCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 155 VGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 155 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|||.++
T Consensus 166 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 218 (280)
T 3pgx_A 166 SAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP 218 (280)
T ss_dssp GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred hhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch
Confidence 99999999999999999999999999999999999999999999999999765
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-43 Score=284.09 Aligned_cols=197 Identities=30% Similarity=0.405 Sum_probs=180.7
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+++|++|.++++++++++.+
T Consensus 22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL 101 (283)
T ss_dssp -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999988888877777899999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC--cCCCCchh
Q 027816 91 KFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--HVGSGSIY 167 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--~~~~~~~Y 167 (218)
++ |++|++|||||.... .++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++.. +.++...|
T Consensus 102 ~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y 180 (283)
T 3v8b_A 102 KF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY 180 (283)
T ss_dssp HH-SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHH
T ss_pred Hh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHH
Confidence 99 799999999998643 788899999999999999999999999999999988889999999999877 77889999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++||+++++++++++.|+++.||+||+|+||+++|+|.+..
T Consensus 181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 221 (283)
T 3v8b_A 181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNT 221 (283)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence 99999999999999999999999999999999999997643
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=284.08 Aligned_cols=195 Identities=29% Similarity=0.415 Sum_probs=183.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+..+..+.+|++|.++++++++++.+++
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999998888888777666778889999999999999999999999
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||.++..+.++...|+++|+
T Consensus 104 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 182 (270)
T 3ftp_A 104 -GALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKA 182 (270)
T ss_dssp -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHH
Confidence 7999999999998888888999999999999999999999999999998887899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++|+++++.|+++.||+||+|+||+++|+|.+..
T Consensus 183 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 218 (270)
T 3ftp_A 183 GVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL 218 (270)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc
Confidence 999999999999999999999999999999998754
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=281.13 Aligned_cols=195 Identities=30% Similarity=0.457 Sum_probs=180.3
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +..+..+++|++|.++++++++++.
T Consensus 20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (277)
T 4dqx_A 20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTT 96 (277)
T ss_dssp --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHH
Confidence 3456788999999999999999999999999999999999998887776654 3458889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+.+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|++
T Consensus 97 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 175 (277)
T 4dqx_A 97 AKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVA 175 (277)
T ss_dssp HHH-SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred HHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHH
Confidence 999 6999999999998888888999999999999999999999999999999888899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
||+++++|+++++.|+++.||+||+|+||+++|+|..+.
T Consensus 176 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 214 (277)
T 4dqx_A 176 SKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKI 214 (277)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhh
Confidence 999999999999999999999999999999999996544
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-43 Score=283.73 Aligned_cols=197 Identities=28% Similarity=0.346 Sum_probs=184.2
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ ..+..+++|++|.++++++++++.
T Consensus 35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 3567889999999999999999999999999999999999999888888886655 678999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~ 168 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+. .+.++...|+
T Consensus 115 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~ 193 (293)
T 3rih_A 115 DAF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYG 193 (293)
T ss_dssp HHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHH
Confidence 999 79999999999988888899999999999999999999999999999998888999999999886 7888999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+||+++++|+++++.|++++||+||+|+||+|+|++.+..
T Consensus 194 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~ 233 (293)
T 3rih_A 194 ASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM 233 (293)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc
Confidence 9999999999999999999999999999999999988654
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=278.87 Aligned_cols=192 Identities=27% Similarity=0.393 Sum_probs=181.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++|++|||||++|||++++++|+++|++|++. +|+.+..++..+++...+..+..+++|++|.++++++++++.+++ +
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-G 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 58999999999999999999999999999886 899988888888887777789999999999999999999999999 7
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|++||+++
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 161 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL 161 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence 99999999998877888899999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++|+++++.|+++.|||||+|+||+++|+|.+..
T Consensus 162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 195 (258)
T 3oid_A 162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHF 195 (258)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGC
T ss_pred HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhc
Confidence 9999999999999999999999999999998654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=279.59 Aligned_cols=192 Identities=30% Similarity=0.411 Sum_probs=179.1
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++||++|||||++|||+++|++|+++|++|++++|+++..++..+++.. .+..+++|++|.++++++++++.++
T Consensus 4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 80 (248)
T 3op4_A 4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDE 80 (248)
T ss_dssp TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999988877776643 3677899999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|++|||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++||
T Consensus 81 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (248)
T 3op4_A 81 F-GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK 159 (248)
T ss_dssp H-CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence 9 799999999999887888899999999999999999999999999999888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++|+++++.|++++|||||+|+||+++|+|.+.
T Consensus 160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 195 (248)
T 3op4_A 160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA 195 (248)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTT
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhh
Confidence 999999999999999999999999999999998754
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=280.22 Aligned_cols=194 Identities=26% Similarity=0.392 Sum_probs=180.3
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +..+..+++|++|.++++++++++.++
T Consensus 24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999998888777665 346788899999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..+.++...|+++|
T Consensus 101 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 179 (277)
T 3gvc_A 101 F-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK 179 (277)
T ss_dssp H-SSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHH
Confidence 9 699999999999888888899999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++++|+++++.|++++||+||+|+||+++|||.+...
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~ 217 (277)
T 3gvc_A 180 AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAM 217 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhh
Confidence 99999999999999999999999999999999987754
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-43 Score=280.12 Aligned_cols=192 Identities=26% Similarity=0.394 Sum_probs=174.3
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+++ +
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g 80 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-G 80 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 468999999999999999999999999999999999999998888887777889999999999999999999999999 7
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.|+||++||.++..+.++...|++||+++
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal 160 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV 160 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence 99999999999877888899999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++|+++++.|+ + |||||+|+||+|+|+|.+...
T Consensus 161 ~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~ 193 (264)
T 3tfo_A 161 RAISDGLRQES-T-NIRVTCVNPGVVESELAGTIT 193 (264)
T ss_dssp HHHHHHHHHHC-S-SEEEEEEEECCC---------
T ss_pred HHHHHHHHHhC-C-CCEEEEEecCCCcCccccccc
Confidence 99999999998 4 999999999999999987653
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=281.18 Aligned_cols=195 Identities=31% Similarity=0.473 Sum_probs=181.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 99 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF- 99 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4578999999999999999999999999999999999999988888887777789999999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhH--HhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYP--LLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~--~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+||||||.....++.+.+.++|++.+++|+.|+++++++++| .|.+++.++||++||.++..+.++...|+++|
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK 179 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASK 179 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHH
Confidence 7999999999998878888999999999999999999999999999 57777779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++++|+++++.|+++.||+||+|+||+|+|+|.+...
T Consensus 180 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~ 217 (279)
T 3sju_A 180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVR 217 (279)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHH
Confidence 99999999999999999999999999999999988754
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=280.59 Aligned_cols=193 Identities=27% Similarity=0.384 Sum_probs=180.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-------------ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-------------NEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
+++||++|||||++|||+++|++|+++|++|++++| +.+.+++..+.+...+..+..+.+|++|.++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 578999999999999999999999999999999988 5667777777777777789999999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccC
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS 159 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~ 159 (218)
++++++++.+++ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++ .++||++||.++..
T Consensus 88 v~~~~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 166 (277)
T 3tsc_A 88 LRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK 166 (277)
T ss_dssp HHHHHHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence 999999999999 7999999999998878888999999999999999999999999999998765 68999999999999
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+.++...|++||+++++|+++++.|++++||+||+|+||+++|+|.+.
T Consensus 167 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 214 (277)
T 3tsc_A 167 MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG 214 (277)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence 999999999999999999999999999999999999999999999765
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=282.07 Aligned_cols=198 Identities=26% Similarity=0.348 Sum_probs=182.3
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+.+++++|++|||||++|||+++|++|+++|++|++++| +.+..++..+++...+..+..+++|++|.++++++++++.
T Consensus 22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI 101 (269)
T ss_dssp --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 346788999999999999999999999999999999887 6666777777777767789999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++
T Consensus 102 ~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 180 (269)
T 4dmm_A 102 ERW-GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSA 180 (269)
T ss_dssp HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHH
Confidence 999 7999999999998777888999999999999999999999999999998887899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
||+++++|+++++.|+++.||+||+|+||+++|+|.+...
T Consensus 181 sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~ 220 (269)
T 4dmm_A 181 AKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA 220 (269)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc
Confidence 9999999999999999999999999999999999987643
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=280.66 Aligned_cols=196 Identities=27% Similarity=0.342 Sum_probs=181.8
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCC---eEEEEEeeCCCHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+. .+..+++|++|.++++++++++
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999999998888888765543 7899999999999999999999
Q ss_pred HhhcCCcccEEEecCCC-CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 89 GSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~-~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
.+++ +++|+||||||. ....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||.++..+.++...|
T Consensus 86 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 164 (281)
T 3svt_A 86 TAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY 164 (281)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHH
T ss_pred HHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhH
Confidence 9999 799999999997 45567888999999999999999999999999999998888999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++||+++++|+++++.|++++|||||+|+||+++|+|.+..
T Consensus 165 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 205 (281)
T 3svt_A 165 GVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI 205 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc
Confidence 99999999999999999999999999999999999998765
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=277.56 Aligned_cols=194 Identities=21% Similarity=0.250 Sum_probs=182.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+++|++|.++++++++++.+++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 86 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY- 86 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4689999999999999999999999999999999999999998888887777889999999999999999999999999
Q ss_pred CcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++ ++||++||..+..+.++...|++||+
T Consensus 87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKa 165 (264)
T 3ucx_A 87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKS 165 (264)
T ss_dssp SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHH
Confidence 7999999999985 456788999999999999999999999999999998765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++++|+++++.|++++|||||+|+||+|+||+.+...
T Consensus 166 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 202 (264)
T 3ucx_A 166 ALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYF 202 (264)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHH
T ss_pred HHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHH
Confidence 9999999999999999999999999999999987654
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=274.40 Aligned_cols=196 Identities=27% Similarity=0.359 Sum_probs=180.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeC--CCHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDA--ASPDQREKLIQEV 88 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~--~~~~~~~~~~~~~ 88 (218)
...++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... ...+..+.+|+ ++.++++++++++
T Consensus 7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (252)
T 3f1l_A 7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI 86 (252)
T ss_dssp TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999888877776543 33678889999 9999999999999
Q ss_pred HhhcCCcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 89 GSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
.+++ +++|+||||||.. ...++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||..+..+.++...|
T Consensus 87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (252)
T 3f1l_A 87 AVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAY 165 (252)
T ss_dssp HHHC-SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHH
T ss_pred HHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchh
Confidence 9998 7999999999985 4467889999999999999999999999999999998888999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++||+++++|+++++.|+++. ||||+|+||+++|+|.+...
T Consensus 166 ~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~ 206 (252)
T 3f1l_A 166 AASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAF 206 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhC
Confidence 999999999999999999887 99999999999999987654
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=276.85 Aligned_cols=201 Identities=29% Similarity=0.397 Sum_probs=177.6
Q ss_pred ccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 9 ~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
.+++.++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+.+|+++.++++++++++
T Consensus 21 ~~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 21 DKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred cchhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 44556788999999999999999999999999999999999999998888888777788999999999999999999999
Q ss_pred HhhcCCcccEEEecCCC-CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 89 GSKFNGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~-~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
.+.+ +++|+||||||. ...+++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||.++..+.++...|
T Consensus 101 ~~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 179 (262)
T 3rkr_A 101 LAAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAY 179 (262)
T ss_dssp HHHH-SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHH
T ss_pred HHhc-CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchH
Confidence 9999 699999999998 45567888999999999999999999999999999998888999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
+++|+++++++++++.|+.+.||+||+|+||+++|+|.+....
T Consensus 180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~ 222 (262)
T 3rkr_A 180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA 222 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc
Confidence 9999999999999999999999999999999999999876543
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=277.81 Aligned_cols=191 Identities=28% Similarity=0.334 Sum_probs=178.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +..+..+++|++|.++++++++++.+++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 78 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT- 78 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH-
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC-
Confidence 578999999999999999999999999999999999999888777665 4468889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++ .++||++||..+..+.++...|+++|+
T Consensus 79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 158 (247)
T 3rwb_A 79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKG 158 (247)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHH
Confidence 6999999999998878888999999999999999999999999999998765 689999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++|+++++.|++++|||||+|+||+++|++.+..
T Consensus 159 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 194 (247)
T 3rwb_A 159 GVIGFTRALATELGKYNITANAVTPGLIESDGVKAS 194 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcccccc
Confidence 999999999999999999999999999999998754
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=280.84 Aligned_cols=197 Identities=30% Similarity=0.407 Sum_probs=175.8
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..++.+|++|||||++|||+++|++|+++|++|++++| +.+..+...+++... +..+..+++|++|.++++++++++.
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 99 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA 99 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999 566667766666543 5678999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++
T Consensus 100 ~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 178 (281)
T 3v2h_A 100 DRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVA 178 (281)
T ss_dssp HHT-SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHH
Confidence 999 6999999999998778888999999999999999999999999999999888899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
||+++++|+++++.|+++.||+||+|+||+++|||.+...
T Consensus 179 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~ 218 (281)
T 3v2h_A 179 AKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQI 218 (281)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhc
Confidence 9999999999999999999999999999999999987543
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=282.35 Aligned_cols=197 Identities=26% Similarity=0.407 Sum_probs=185.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+++|++|.++++++++++.+.
T Consensus 26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999999999999888888777778999999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|+||||||....+++.+.+.++|++.+++|+.|+++++++++|+|.+++ .++||++||.++..+.++...|++|
T Consensus 106 ~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 184 (301)
T 3tjr_A 106 L-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVA 184 (301)
T ss_dssp H-SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred C-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHH
Confidence 8 6999999999998878888999999999999999999999999999998765 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++++++++++.|+++.||+|++|+||+++|+|.+...
T Consensus 185 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 223 (301)
T 3tjr_A 185 KYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSE 223 (301)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccc
Confidence 999999999999999999999999999999999988653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=279.92 Aligned_cols=199 Identities=23% Similarity=0.259 Sum_probs=182.5
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-------hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-------ELNKCLKEWQSKGFVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~ 84 (218)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++...+..+..+++|++|.++++++
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 83 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA 83 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 45688999999999999999999999999999999999876 45666666666677899999999999999999
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-CC
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GS 163 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-~~ 163 (218)
++++.+++ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+. ++
T Consensus 84 ~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~ 162 (285)
T 3sc4_A 84 VAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR 162 (285)
T ss_dssp HHHHHHHH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC
T ss_pred HHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC
Confidence 99999999 69999999999988888899999999999999999999999999999998888999999999988875 78
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecc-cccChhhHHHHhc
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW-YTKTSLVERVMFS 211 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG-~v~t~~~~~~~~~ 211 (218)
...|++||+++++|+++|+.|++++|||||+|+|| +++|+|.+.....
T Consensus 163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~ 211 (285)
T 3sc4_A 163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG 211 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS
T ss_pred CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc
Confidence 89999999999999999999999999999999999 7999999887644
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=279.46 Aligned_cols=194 Identities=25% Similarity=0.349 Sum_probs=169.9
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+.++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +..+..+++|++|.++++++++++.
T Consensus 20 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (266)
T 3grp_A 20 GSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAE 96 (266)
T ss_dssp -CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred cchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHH
Confidence 3566789999999999999999999999999999999999998887776554 3468889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..+.++...|++
T Consensus 97 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a 175 (266)
T 3grp_A 97 REM-EGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCA 175 (266)
T ss_dssp HHH-TSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHH
Confidence 999 6999999999998778888999999999999999999999999999998888899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|+++++|+++++.|++++|||||+|+||+++|+|.+.
T Consensus 176 sKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 213 (266)
T 3grp_A 176 AKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK 213 (266)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc
Confidence 99999999999999999999999999999999999864
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=276.84 Aligned_cols=194 Identities=24% Similarity=0.310 Sum_probs=172.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--C-CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--G-FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~-~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... . ..+..+++|++|.++++++++++.+
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 567999999999999999999999999999999999999888887777543 2 5788899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++ +++|+||||||.....++ +.+.++|++.+++|+.++++++++++|+|++++.++||++||.++..+.++...|+++
T Consensus 84 ~~-g~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 161 (250)
T 3nyw_A 84 KY-GAVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGST 161 (250)
T ss_dssp HH-CCEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHH
T ss_pred hc-CCCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHH
Confidence 99 799999999999877777 7889999999999999999999999999998878999999999999877779999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++++|+++++.|+++.|||||+|+||+++|+|.+...
T Consensus 162 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~ 200 (250)
T 3nyw_A 162 KFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG 200 (250)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC
Confidence 999999999999999999999999999999999998754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=281.46 Aligned_cols=193 Identities=24% Similarity=0.353 Sum_probs=178.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC------------hhhHHHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
.+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++...+..+..+++|++|.++
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 46789999999999999999999999999999999887 666777777777777789999999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCCC-CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCcc
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKP-TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGL 158 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~~-~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~ 158 (218)
++++++++.+.+ +++|+||||||...... +.+.+.++|++.+++|+.|+++++++++|+|.+++ .++||++||.++.
T Consensus 104 v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~ 182 (299)
T 3t7c_A 104 MQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL 182 (299)
T ss_dssp HHHHHHHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence 999999999999 79999999999876654 88899999999999999999999999999987764 6899999999999
Q ss_pred CcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 159 SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 159 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.+.++...|++||+++++|+++++.|+++.||+||+|+||+|+|+|.+
T Consensus 183 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 230 (299)
T 3t7c_A 183 RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLL 230 (299)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccc
Confidence 999999999999999999999999999999999999999999999975
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=273.72 Aligned_cols=192 Identities=29% Similarity=0.401 Sum_probs=179.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+..+..+.+|++|.++++++++++.+++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 82 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL- 82 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999988888777776656678899999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||....+++.+.+.++|++.+++|+.|+++++++++|+|.+++ ++||++||.++..+.++...|+++|++
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a 161 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFG 161 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence 6999999999988777888999999999999999999999999999998776 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|+++++.|+++.||+||+|+||+++|+|.+.
T Consensus 162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 195 (247)
T 2jah_A 162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH 195 (247)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc
Confidence 9999999999999999999999999999998653
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=280.63 Aligned_cols=194 Identities=29% Similarity=0.335 Sum_probs=181.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+++
T Consensus 4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF 83 (280)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999999999999988888887777789999999999999999999999999
Q ss_pred CCcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhhhh
Q 027816 93 NGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGAT 170 (218)
Q Consensus 93 ~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~~s 170 (218)
+++|+||||||.. ..+++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+. .+.++...|++|
T Consensus 84 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as 162 (280)
T 3tox_A 84 -GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAAS 162 (280)
T ss_dssp -SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHH
Confidence 6999999999976 4467888999999999999999999999999999999888999999999888 678889999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++++|+++++.|+++.||+||+|+||+|+||+.+.
T Consensus 163 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 199 (280)
T 3tox_A 163 KAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFA 199 (280)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence 9999999999999999999999999999999998764
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-43 Score=282.27 Aligned_cols=200 Identities=28% Similarity=0.409 Sum_probs=171.6
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
....+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... ...+..+++|++|.++++++++++
T Consensus 26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 105 (281)
T 4dry_A 26 QGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAV 105 (281)
T ss_dssp --------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3445678999999999999999999999999999999999999888877776543 334588999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCccCcCCCCc
Q 027816 89 GSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGSGS 165 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~~~~~~~~ 165 (218)
.+++ +++|+||||||.... .++.+.+.++|++.+++|+.|+++++++++|+|.+++ .++||++||.++..+.++..
T Consensus 106 ~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~ 184 (281)
T 4dry_A 106 RAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSA 184 (281)
T ss_dssp HHHH-SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCH
T ss_pred HHHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCCh
Confidence 9999 799999999998654 6788899999999999999999999999999998875 68999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
.|+++|+++++|+++++.|+++.||+||+|+||+|+|+|.+....
T Consensus 185 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~ 229 (281)
T 4dry_A 185 PYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST 229 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc
Confidence 999999999999999999999999999999999999999887643
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=280.13 Aligned_cols=192 Identities=26% Similarity=0.352 Sum_probs=177.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC----------------hhhHHHHHHHhhhCCCeEEEEEeeCCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN----------------EVELNKCLKEWQSKGFVVSGSVCDAAS 77 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~----------------~~~~~~~~~~~~~~~~~v~~~~~D~~~ 77 (218)
+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+.+...+..+..+++|++|
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 5789999999999999999999999999999999887 666777777776667789999999999
Q ss_pred HHHHHHHHHHHHhhcCCcccEEEecCCCCCCC-CCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecC
Q 027816 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRK-PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSV 155 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~-~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~ 155 (218)
.++++++++++.+++ +++|+||||||..... ++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||.
T Consensus 88 ~~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 88 YDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp HHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred HHHHHHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 999999999999999 6999999999987655 477899999999999999999999999999998764 6899999999
Q ss_pred CccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 156 GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 156 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.+..+.++...|++||+++++|+++|+.|++++|||||+|+||+|+|+|.+
T Consensus 167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 217 (286)
T 3uve_A 167 GGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLH 217 (286)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTS
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccc
Confidence 999999999999999999999999999999999999999999999999975
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=275.88 Aligned_cols=192 Identities=23% Similarity=0.334 Sum_probs=179.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+++|++|.++++++++++.+++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 81 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF- 81 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999999999999999988888887767789999999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHh-HhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL-KASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l-~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+| ++.+.++||++||..+..+.++...|++||+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa 161 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA 161 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHH
Confidence 799999999998877788899999999999999999999999999999 4555789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-cCCeEEEEeecccccChhhH
Q 027816 173 AMNQLTRNLACEWA-KDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 173 a~~~~~~~l~~e~~-~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++|+++++.|++ +.|||||+|+||+|+|++..
T Consensus 162 a~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~ 196 (257)
T 3imf_A 162 GVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGA 196 (257)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC
T ss_pred HHHHHHHHHHHHhccccCeEEEEEEECCCcCCcch
Confidence 99999999999997 77999999999999999754
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=276.08 Aligned_cols=197 Identities=28% Similarity=0.425 Sum_probs=179.5
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+..++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++... +..+..+.+|++|.++++++++++
T Consensus 7 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 7 PTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTAT 86 (267)
T ss_dssp ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 445688999999999999999999999999999999999998887777666543 557888999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 89 GSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
.+++ +++|+||||||.... .++.+.+.++|++.+++|+.|++++++.++|+|++++.++||++||..+..+.++...|
T Consensus 87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (267)
T 1iy8_A 87 TERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGY 165 (267)
T ss_dssp HHHH-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHH
T ss_pred HHHc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccH
Confidence 9999 699999999998765 67788899999999999999999999999999988777999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|++++++++.++.|+++.||+||+|+||+++|+|.+..
T Consensus 166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 206 (267)
T 1iy8_A 166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENS 206 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhcc
Confidence 99999999999999999999999999999999999998763
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=272.79 Aligned_cols=190 Identities=22% Similarity=0.232 Sum_probs=167.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
|++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. .+..+.+|++|.++++++++++.+++ +
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-g 76 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWG-G 76 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHH-C
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhc-C
Confidence 3578999999999999999999999999999999999988887777633 48889999999999999999999999 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++ ++||++||.++..+.++...|++||+++
T Consensus 77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~ 155 (235)
T 3l6e_A 77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGM 155 (235)
T ss_dssp SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence 999999999998777888999999999999999999999999999998765 5999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++|+++++.|+++.|||||+|+||+++|+|.+...
T Consensus 156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 190 (235)
T 3l6e_A 156 RGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD 190 (235)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEEEEEECCCC-----
T ss_pred HHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC
Confidence 99999999999999999999999999999987653
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=274.72 Aligned_cols=192 Identities=29% Similarity=0.390 Sum_probs=178.4
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+.+|++|||||++|||+++|++|+++|++|+++++ +.+..++..+++...+..+..+++|++|.++++++++++.+++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 80 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF- 80 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 46899999999999999999999999999988776 5567777777777777789999999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..+.++..+|++||++
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG 160 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence 69999999999988788889999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++++++.|++++||+||+|+||+++|+|.+.
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 194 (246)
T 3osu_A 161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDA 194 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC
T ss_pred HHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc
Confidence 9999999999999999999999999999998653
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-42 Score=278.11 Aligned_cols=196 Identities=30% Similarity=0.423 Sum_probs=181.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+++|++|.++++++++++.++
T Consensus 27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999988888888777778899999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcC--CCCchhh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHV--GSGSIYG 168 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~--~~~~~Y~ 168 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++ .++||++||..+..+. ++...|+
T Consensus 107 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~ 185 (276)
T 3r1i_A 107 L-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYC 185 (276)
T ss_dssp H-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHH
T ss_pred c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHH
Confidence 9 6999999999998878888999999999999999999999999999998765 3899999999887654 3678999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+||+++++|+++++.|++++|||||+|+||+|+|+|.+..
T Consensus 186 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~ 225 (276)
T 3r1i_A 186 TSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL 225 (276)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc
Confidence 9999999999999999999999999999999999998653
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=272.43 Aligned_cols=197 Identities=59% Similarity=0.914 Sum_probs=182.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++...+..+..+++|++|.++++++++++.++
T Consensus 4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (260)
T 2ae2_A 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 83 (260)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999998888777777666668899999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++...|+++|
T Consensus 84 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 163 (260)
T 2ae2_A 84 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 163 (260)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred cCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHH
Confidence 84589999999998776777889999999999999999999999999999888779999999999999989999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++.++.|+++.||+||+|+||+++|++.+..
T Consensus 164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 200 (260)
T 2ae2_A 164 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT 200 (260)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhh
Confidence 9999999999999999999999999999999997653
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=277.45 Aligned_cols=195 Identities=24% Similarity=0.302 Sum_probs=170.1
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++..+.+|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. ..+..+++|++|.++++++++++.+
T Consensus 22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---DDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---SCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 4445788999999999999999999999999999999999998888777663 4578899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCccCcCCCCchh
Q 027816 91 KFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
++ +++|+||||||.... .++.+.+.++|++.+++|+.|+++++++++|+|.+++ .++||++||..+..+.++...|
T Consensus 99 ~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y 177 (272)
T 4dyv_A 99 KF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPY 177 (272)
T ss_dssp HH-SCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHH
Confidence 99 799999999998654 6788899999999999999999999999999998875 5899999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++||+++++|+++++.|+++.||+||+|+||+|+|+|.+...
T Consensus 178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 219 (272)
T 4dyv_A 178 TATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK 219 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred HHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc
Confidence 999999999999999999999999999999999999987654
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-42 Score=273.71 Aligned_cols=191 Identities=29% Similarity=0.327 Sum_probs=178.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. ..+..+++|++|.++++++++++.+++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~- 80 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG---PAAYAVQMDVTRQDSIDAAIAATVEHA- 80 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHHHHHHS-
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC---CCceEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999999999999998887777663 357889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||.++..+.++...|++||+
T Consensus 81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 160 (259)
T 4e6p_A 81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKA 160 (259)
T ss_dssp SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHH
Confidence 6999999999998778888999999999999999999999999999998765 689999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++.++.|++++||+||+|+||+++||+.+..
T Consensus 161 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 196 (259)
T 4e6p_A 161 AVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV 196 (259)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh
Confidence 999999999999999999999999999999998765
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=274.28 Aligned_cols=198 Identities=34% Similarity=0.547 Sum_probs=179.8
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh-hhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-QSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
.+..++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++ ...+..+..+.+|+++.++++++++++
T Consensus 14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (267)
T 1vl8_A 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAV 93 (267)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3566788999999999999999999999999999999999998887776666 333556888999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCC-ccCcCCCCchh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG-GLSHVGSGSIY 167 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~-~~~~~~~~~~Y 167 (218)
.+++ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.+ +..+.++...|
T Consensus 94 ~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y 172 (267)
T 1vl8_A 94 KEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAY 172 (267)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHH
T ss_pred HHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhH
Confidence 9999 689999999998777778889999999999999999999999999999888779999999998 88888889999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|++++++++.++.|+++.||+||+|+||+++|+|.+..
T Consensus 173 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 213 (267)
T 1vl8_A 173 AASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAV 213 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccc
Confidence 99999999999999999999999999999999999997754
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=274.42 Aligned_cols=197 Identities=60% Similarity=0.964 Sum_probs=177.6
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+
T Consensus 15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 15 GRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp -CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999888887777766666788999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||.++..+.++...|+++
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 174 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSAS 174 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHH
Confidence 88458999999999887778889999999999999999999999999999988777899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++++++++.++.|+++.||+||+|+||+++|||.+.
T Consensus 175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 211 (273)
T 1ae1_A 175 KGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET 211 (273)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhh
Confidence 9999999999999999999999999999999999764
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=279.78 Aligned_cols=194 Identities=29% Similarity=0.440 Sum_probs=179.3
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC------------hhhHHHHHHHhhhCCCeEEEEEeeCCCHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAASPD 79 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 79 (218)
..+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+.+...+..+..+++|++|.+
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA 120 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 345789999999999999999999999999999998876 56666777777666778999999999999
Q ss_pred HHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCcc
Q 027816 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGL 158 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~ 158 (218)
+++++++++.+++ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++ .++||++||..+.
T Consensus 121 ~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~ 199 (317)
T 3oec_A 121 SLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL 199 (317)
T ss_dssp HHHHHHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred HHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence 9999999999999 7999999999998888889999999999999999999999999999998764 5899999999999
Q ss_pred CcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 159 SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 159 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.+.++...|++||+++++|+++|+.|+++.||+||+|+||+|+|+|.+
T Consensus 200 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 247 (317)
T 3oec_A 200 RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL 247 (317)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence 999999999999999999999999999999999999999999999975
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-42 Score=280.17 Aligned_cols=193 Identities=26% Similarity=0.367 Sum_probs=180.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC---eEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+++||++|||||++|||+++|++|+++|+ +|++++|+.+.+++..+++... +..+..+++|++|.++++++++++
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 57899999999999999999999999998 9999999999988888777653 568999999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 89 GSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
.+++ +++|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|
T Consensus 110 ~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y 188 (287)
T 3rku_A 110 PQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIY 188 (287)
T ss_dssp CGGG-CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHH
T ss_pred HHhc-CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchH
Confidence 9999 69999999999865 567889999999999999999999999999999998888999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|+++++|+++++.|++++||+||+|+||+|+|+|.+.
T Consensus 189 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 228 (287)
T 3rku_A 189 CASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLV 228 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccc
Confidence 9999999999999999999999999999999999999754
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-42 Score=276.92 Aligned_cols=195 Identities=28% Similarity=0.328 Sum_probs=182.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++||++|||||++|||+++|++|+++|++|++++|+.+..++..+++...+..+..+++|+++.++++++++++.+.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~- 107 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI- 107 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 5688999999999999999999999999999999999999888888888777778999999999999999999999877
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||.++..+.+....|++||+
T Consensus 108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 186 (275)
T 4imr_A 108 -APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKA 186 (275)
T ss_dssp -SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHH
Confidence 6899999999988778888999999999999999999999999999998888899999999999998888889999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++++|+++++.|+++.||+||+|+||+++|+|.+...
T Consensus 187 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 223 (275)
T 4imr_A 187 AQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRR 223 (275)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEeccccCccccccc
Confidence 9999999999999999999999999999999987653
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=273.43 Aligned_cols=194 Identities=28% Similarity=0.345 Sum_probs=177.5
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..+++||++|||||++|||+++|++|+++|++|+++++ +.+..+...+++...+..+..+++|++|.++++++++++.+
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999988755 56667777777777777899999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCC-ccCcCCCCchhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVG-GLSHVGSGSIYGA 169 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~-~~~~~~~~~~Y~~ 169 (218)
++ +++|+||||||....+++.+.+.++|++.+++|+.|+++++++++|+|.+ .++||++||.. +..+.++...|++
T Consensus 93 ~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~a 169 (270)
T 3is3_A 93 HF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSG 169 (270)
T ss_dssp HH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHH
Confidence 99 69999999999988788889999999999999999999999999999966 47999999988 5678889999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
||+++++|+++++.|++++|||||+|+||+++|+|.+..
T Consensus 170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 208 (270)
T 3is3_A 170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEV 208 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence 999999999999999999999999999999999998754
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-42 Score=271.92 Aligned_cols=194 Identities=28% Similarity=0.395 Sum_probs=183.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++...+.++..+.+|++|.++++++++++.+++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN- 80 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT-
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 5679999999999999999999999999999999999999888888887777789999999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.++...|+++|++
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAG 160 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHH
Confidence 69999999999987778888999999999999999999999999999988888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++.|+.++||+||+|+||+++|+|.+..
T Consensus 161 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 195 (247)
T 3lyl_A 161 VIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL 195 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS
T ss_pred HHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc
Confidence 99999999999999999999999999999987643
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=277.15 Aligned_cols=195 Identities=23% Similarity=0.313 Sum_probs=174.8
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-------HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-------LNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~ 85 (218)
++++||++|||||++|||+++|++|+++|++|++++|+.+. +++..+++...+..+..+++|++|.+++++++
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 57889999999999999999999999999999999998753 55566666666778999999999999999999
Q ss_pred HHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc--CCC
Q 027816 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--VGS 163 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--~~~ 163 (218)
+++.+++ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+ .++
T Consensus 82 ~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~ 160 (274)
T 3e03_A 82 AATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA 160 (274)
T ss_dssp HHHHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred HHHHHHc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence 9999999 7999999999998777888899999999999999999999999999999888899999999998887 677
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecc-cccChhhHHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW-YTKTSLVERV 208 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG-~v~t~~~~~~ 208 (218)
...|++||+++++|+++++.|+++.||+||+|+|| +++|+|.+..
T Consensus 161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~ 206 (274)
T 3e03_A 161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML 206 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc
Confidence 89999999999999999999999999999999999 6999998543
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=273.49 Aligned_cols=195 Identities=30% Similarity=0.409 Sum_probs=177.6
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++||++|||||++|||+++|++|+++|++|++++|++ ..++..+++...+..+..+++|++|.++++++.+. .+.
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~ 103 (273)
T 3uf0_A 26 PFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAA 103 (273)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHh
Confidence 3578899999999999999999999999999999999764 45666667766777899999999999999999544 455
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..+.++...|+++|
T Consensus 104 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK 182 (273)
T 3uf0_A 104 T-RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASK 182 (273)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred c-CCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHH
Confidence 6 689999999999887888899999999999999999999999999999888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++++|+++++.|++++|||||+|+||+|+|++.+...
T Consensus 183 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 220 (273)
T 3uf0_A 183 HAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALR 220 (273)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcc
Confidence 99999999999999999999999999999999987653
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=270.80 Aligned_cols=195 Identities=29% Similarity=0.405 Sum_probs=180.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+++++|++|||||+||||++++++|+++|++|++++|+.++.++..+++... +..+..+++|++|.++++++++++.++
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999998887777666543 556888999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|
T Consensus 83 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 161 (263)
T 3ai3_A 83 F-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTK 161 (263)
T ss_dssp H-SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHH
Confidence 9 689999999998877788899999999999999999999999999999877778999999999999989999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++.++.|++++||+||+|+||+++||+.+..
T Consensus 162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 198 (263)
T 3ai3_A 162 AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKT 198 (263)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhh
Confidence 9999999999999999999999999999999997654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=274.40 Aligned_cols=190 Identities=28% Similarity=0.372 Sum_probs=176.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +..+..+.+|++|.++++++++++.+++
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 83 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF 83 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3678999999999999999999999999999999999999888777666 3457788999999999999999999999
Q ss_pred CCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 93 NGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 93 ~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++...|++|
T Consensus 84 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 162 (271)
T 3tzq_B 84 -GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACT 162 (271)
T ss_dssp -SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHH
Confidence 69999999999863 345668899999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
|+++++|+++++.|++++||+||+|+||+++||+.+
T Consensus 163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 198 (271)
T 3tzq_B 163 KAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE 198 (271)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence 999999999999999999999999999999999876
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-42 Score=275.77 Aligned_cols=205 Identities=25% Similarity=0.355 Sum_probs=177.8
Q ss_pred cccccccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec-CChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHH
Q 027816 4 AESSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQRE 82 (218)
Q Consensus 4 ~~~~~~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 82 (218)
.+...+.|...+++|++|||||++|||+++|++|+++|++|++++ ++.+..+...+++...+..+..+.+|++|.++++
T Consensus 12 ~~~~~~~p~~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~ 91 (269)
T 3gk3_A 12 LEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCE 91 (269)
T ss_dssp ------------CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHH
T ss_pred cCcCcCCchhhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHH
Confidence 334444556667899999999999999999999999999999988 6666666666666666678999999999999999
Q ss_pred HHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC
Q 027816 83 KLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG 162 (218)
Q Consensus 83 ~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~ 162 (218)
++++++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||.++..+.+
T Consensus 92 ~~~~~~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 170 (269)
T 3gk3_A 92 RCAEKVLADF-GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF 170 (269)
T ss_dssp HHHHHHHHHH-SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred HHHHHHHHHc-CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC
Confidence 9999999999 699999999999887888899999999999999999999999999999888789999999999999999
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+...|+++|+++++|++.++.|+++.||+||+|+||+++|+|.+...
T Consensus 171 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 217 (269)
T 3gk3_A 171 GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP 217 (269)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--
T ss_pred CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc
Confidence 99999999999999999999999999999999999999999987543
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=273.33 Aligned_cols=192 Identities=29% Similarity=0.380 Sum_probs=176.8
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++++||++|||||++|||+++|++|+++|++|++++|+.+..++..+++... ...+..+.+|+++.+++++++++
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~--- 82 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK--- 82 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH---
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh---
Confidence 4678999999999999999999999999999999999999888887777654 45788899999999998877654
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++...|++|
T Consensus 83 -~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 160 (267)
T 3t4x_A 83 -Y-PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSAT 160 (267)
T ss_dssp -C-CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred -c-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHH
Confidence 4 78999999999988778889999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++++|+++++.|+++.|||||+|+||+++|++.+...
T Consensus 161 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 199 (267)
T 3t4x_A 161 KTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETML 199 (267)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHH
Confidence 999999999999999999999999999999999887654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-42 Score=275.75 Aligned_cols=194 Identities=25% Similarity=0.327 Sum_probs=179.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..++||++|||||++|||+++|++|+++|++|++++|+.+..++..+++.. .+..+..+++|++|.++++++++++.++
T Consensus 23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999888877777643 3567899999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||
T Consensus 103 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (277)
T 4fc7_A 103 F-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK 181 (277)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred c-CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence 9 799999999998877788899999999999999999999999999999877778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++|+++++.|+++.|||||+|+||+|+|++...
T Consensus 182 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 217 (277)
T 4fc7_A 182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLR 217 (277)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHH
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhh
Confidence 999999999999999999999999999999987543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=272.39 Aligned_cols=193 Identities=28% Similarity=0.432 Sum_probs=179.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+..+..+++|+++.++++++++++.+++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF- 82 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 4679999999999999999999999999999999999988888777776666678899999999999999999999999
Q ss_pred CcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++...|+++|+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 162 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG 162 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHH
Confidence 6899999999987 566778899999999999999999999999999998877789999999999988899999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++++.++.|+++.|||||+|+||+++|+|.+.
T Consensus 163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 197 (262)
T 1zem_A 163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWE 197 (262)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence 99999999999999999999999999999999765
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-42 Score=276.38 Aligned_cols=195 Identities=25% Similarity=0.324 Sum_probs=165.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|++|||||++|||+++|++|+++|++|++++| +.+..++..+++...+..+..+++|++|.++++++++++.+++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 567899999999999999999999999999999985 7777777777777777789999999999999999999999999
Q ss_pred CCcccEEEecCCC--CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEEEEecCCccCcCCCCchh
Q 027816 93 NGKLNILVNNVGT--NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 93 ~~~id~vv~~ag~--~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+++|+||||||. ....++.+.+.++|++.+++|+.|+++++++++|+|.+++ .++||++||.++..+.++...|
T Consensus 106 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y 184 (280)
T 4da9_A 106 -GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDY 184 (280)
T ss_dssp -SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHH
T ss_pred -CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHH
Confidence 699999999998 4456788899999999999999999999999999998755 6799999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++|+++++++++++.|++++||+||+|+||+++|+|.+...
T Consensus 185 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 226 (280)
T 4da9_A 185 CMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS 226 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc
Confidence 999999999999999999999999999999999999987653
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-41 Score=266.69 Aligned_cols=200 Identities=31% Similarity=0.381 Sum_probs=180.6
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeC--CCHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDA--ASPDQREKLIQE 87 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~--~~~~~~~~~~~~ 87 (218)
....++||+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ..+..+.+|+ ++.+++++++++
T Consensus 8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~ 87 (247)
T 3i1j_A 8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR 87 (247)
T ss_dssp CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence 3446789999999999999999999999999999999999999888887776543 4556666666 999999999999
Q ss_pred HHhhcCCcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCch
Q 027816 88 VGSKFNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~ 166 (218)
+.+.+ +++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...
T Consensus 88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~ 166 (247)
T 3i1j_A 88 VEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGA 166 (247)
T ss_dssp HHHHH-SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHH
T ss_pred HHHhC-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcch
Confidence 99998 6999999999985 456778899999999999999999999999999998888899999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccccChhhHHHHhc
Q 027816 167 YGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERVMFS 211 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~t~~~~~~~~~ 211 (218)
|+++|+++++|+++++.|+.+ .|||||+|+||+++|+|.++....
T Consensus 167 Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~ 212 (247)
T 3i1j_A 167 YGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD 212 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc
Confidence 999999999999999999976 799999999999999998876543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=271.79 Aligned_cols=193 Identities=28% Similarity=0.416 Sum_probs=173.4
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++|++|||||++|||++++++|+++|++|++++|+.+. +++..+++... +..+..+.+|++|.++++++++++.+++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 578999999999999999999999999999999999887 77766666543 4568889999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|+
T Consensus 82 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (260)
T 1x1t_A 82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence 6899999999987767778899999999999999999999999999998877789999999999999899999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++.++.|+++.||+||+|+||+++|+|.+..
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 196 (260)
T 1x1t_A 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ 196 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh
Confidence 999999999999999999999999999999997654
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=270.86 Aligned_cols=191 Identities=31% Similarity=0.428 Sum_probs=177.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++|+++||||++|||++++++|+++|++|++++| +.+..++..+++...+..+..+++|++|.++++++++++.+++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF- 80 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 57899999999999999999999999999999998 7777777777776656678889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++.++||++||.++..+.++...|+++|++
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 160 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAG 160 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence 68999999999877777888999999999999999999999999999988777899999999988888899999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++++++++.|+.+.||+||+|+||+++|+|.+
T Consensus 161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 193 (246)
T 2uvd_A 161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTD 193 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSS
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeccccCcchh
Confidence 999999999999999999999999999999865
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-42 Score=272.88 Aligned_cols=187 Identities=32% Similarity=0.424 Sum_probs=174.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++ +..+..+++|++|.++++++++++.+.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL- 80 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh-
Confidence 578999999999999999999999999999999999998888777665 3468889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||.++..+.++...|+++|++
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa 158 (255)
T 4eso_A 81 GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAA 158 (255)
T ss_dssp SSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHH
Confidence 79999999999988788889999999999999999999999999999865 3799999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|+++++.|++++|||||+|+||+++||+.+
T Consensus 159 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 191 (255)
T 4eso_A 159 LVSFASVLAAELLPRGIRVNSVSPGFIDTPTKG 191 (255)
T ss_dssp HHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTT
T ss_pred HHHHHHHHHHHHhhhCcEEEEEecCcccCcccc
Confidence 999999999999999999999999999999864
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=270.33 Aligned_cols=197 Identities=26% Similarity=0.357 Sum_probs=178.4
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec-CChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+....++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...+..+..+.+|++|.++++++++++.
T Consensus 7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (256)
T 3ezl_A 7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK 86 (256)
T ss_dssp ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence 44567899999999999999999999999999998877 66667777777776667788999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.++...|++
T Consensus 87 ~~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 165 (256)
T 3ezl_A 87 AEV-GEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYST 165 (256)
T ss_dssp HHT-CCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHH
T ss_pred Hhc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHH
Confidence 999 6999999999998878888999999999999999999999999999999888899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+|+++++|+++++.|+++.||+||+|+||+++|+|.+..
T Consensus 166 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 204 (256)
T 3ezl_A 166 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI 204 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc
Confidence 999999999999999999999999999999999998753
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=274.53 Aligned_cols=191 Identities=29% Similarity=0.368 Sum_probs=171.2
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC------------hhhHHHHHHHhhhCCCeEEEEEeeCCCH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAASP 78 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 78 (218)
+..+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+.+...+..+..+++|++|.
T Consensus 7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 86 (278)
T 3sx2_A 7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR 86 (278)
T ss_dssp --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence 4457889999999999999999999999999999999987 6666666666666677899999999999
Q ss_pred HHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCc
Q 027816 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGG 157 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~ 157 (218)
++++++++++.+++ +++|+||||||...... +.++|++.+++|+.++++++++++|+|.+++ .++||++||.++
T Consensus 87 ~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 161 (278)
T 3sx2_A 87 ESLSAALQAGLDEL-GRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG 161 (278)
T ss_dssp HHHHHHHHHHHHHH-CCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHc-CCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence 99999999999999 79999999999864332 5899999999999999999999999998764 689999999998
Q ss_pred cCcC----CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 158 LSHV----GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 158 ~~~~----~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
..+. ++...|++||+++++|+++++.|+++.||+||+|+||+|+|||.+
T Consensus 162 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 214 (278)
T 3sx2_A 162 LAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMIN 214 (278)
T ss_dssp TSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTS
T ss_pred cCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccch
Confidence 8876 667889999999999999999999999999999999999999975
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-42 Score=272.96 Aligned_cols=192 Identities=23% Similarity=0.279 Sum_probs=163.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++ +..+..+++|++|.++++++++++.+++
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 79 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF- 79 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 578999999999999999999999999999999999988877666554 3457888999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCC----CCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC------CCCeEEEEecCCccCcCCC
Q 027816 94 GKLNILVNNVGTNIRKPTI----EYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~----~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~------~~~~iv~~ss~~~~~~~~~ 163 (218)
+++|++|||||.....++. +.+.++|++.+++|+.|+++++++++|+|.++ +.++||++||.++..+.++
T Consensus 80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~ 159 (257)
T 3tpc_A 80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG 159 (257)
T ss_dssp SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC
Confidence 7999999999987654433 67899999999999999999999999999874 5689999999999999999
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
...|++||+++++|+++++.|++++||+||+|+||+++|++.+...
T Consensus 160 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 205 (257)
T 3tpc_A 160 QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP 205 (257)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC
Confidence 9999999999999999999999999999999999999999987654
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=277.48 Aligned_cols=195 Identities=27% Similarity=0.372 Sum_probs=175.8
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCC--eEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++++|++|||||+||||+++|++|+++|++|++++|+.+++++..+++...+. .+..+.+|+++.++++++++++.+
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA 83 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999998888877765443 789999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC------CCCeEEEEecCCccCcCCCC
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~------~~~~iv~~ss~~~~~~~~~~ 164 (218)
.+ +++|+||||||....+++.+.+.++|++.+++|+.|+++++++++|+|.++ +.++||++||.++..+.++.
T Consensus 84 ~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~ 162 (319)
T 3ioy_A 84 RF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSP 162 (319)
T ss_dssp HT-CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSS
T ss_pred hC-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCC
Confidence 98 799999999999887888899999999999999999999999999999764 56899999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
..|++||+++++|+++++.|+.+.||+|++|+||+|+|++.+..
T Consensus 163 ~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 206 (319)
T 3ioy_A 163 GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD 206 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence 99999999999999999999999999999999999999998754
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=269.39 Aligned_cols=191 Identities=27% Similarity=0.327 Sum_probs=177.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh--HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+|++|||||++|||++++++|+++|++|++++|+.+. +++..+++...+..+..+++|++|.++++++++++.+++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 80 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-G 80 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-T
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 6899999999999999999999999999999999877 777777776556678899999999999999999999999 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++. ++||++||..+..+.++...|+++|++
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (258)
T 3a28_C 81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA 160 (258)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence 8999999999877777888999999999999999999999999999987766 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.++.|+++.||+||+|+||+++|+|.+..
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 195 (258)
T 3a28_C 161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQI 195 (258)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHH
T ss_pred HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhh
Confidence 99999999999999999999999999999997763
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=273.64 Aligned_cols=187 Identities=23% Similarity=0.272 Sum_probs=172.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++.+|++|||||++|||+++|++|+++|++|++++|+.+.+++.. ...+..+++|++|.++++++++++.+.+
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 85 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIY- 85 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHC-
Confidence 467899999999999999999999999999999999987654321 2257888999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|++||++
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a 165 (266)
T 3p19_A 86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFA 165 (266)
T ss_dssp CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHH
Confidence 69999999999988888889999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|+++++.|+++.||+||+|+||+|+|++.+.
T Consensus 166 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 199 (266)
T 3p19_A 166 VHAISENVREEVAASNVRVMTIAPSAVKTELLSH 199 (266)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeCccccchhhc
Confidence 9999999999999999999999999999999764
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=271.13 Aligned_cols=194 Identities=31% Similarity=0.478 Sum_probs=180.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+.+
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 97 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY- 97 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 5789999999999999999999999999999999999988887777776656678899999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHH--hHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL--LKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~--l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|. |.+++.++||++||.++..+.++...|+++|
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 177 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK 177 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHH
Confidence 68999999999877777888999999999999999999999999999 8877678999999999999989999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++++.|+++.||+||+|+||+++|+|.+..
T Consensus 178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 214 (277)
T 2rhc_B 178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASV 214 (277)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhh
Confidence 9999999999999999999999999999999997654
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=274.16 Aligned_cols=192 Identities=25% Similarity=0.298 Sum_probs=170.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+.+++|++|||||++|||+++|++|+++|++|++. .|+.+..++..+++...+..+..+++|++|.++++++++++.+.
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999998887 66777777777777777778999999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++ .++||++||..+..+.++...|++||
T Consensus 103 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK 179 (267)
T 3u5t_A 103 F-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAK 179 (267)
T ss_dssp H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHH
Confidence 9 79999999999988788889999999999999999999999999999965 37999999999988999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++|+++++.|+++.|||||+|+||+++|+|.+.
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 215 (267)
T 3u5t_A 180 AGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLE 215 (267)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEEEEECCBC------
T ss_pred HHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccc
Confidence 999999999999999999999999999999999764
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=267.79 Aligned_cols=191 Identities=24% Similarity=0.275 Sum_probs=177.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|++|||||++|||++++++|+++|++|++++|+.+..+...+++...+..+..+++|++|.++++++++++.+++ +++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence 6899999999999999999999999999999999988887777776656678889999999999999999999998 699
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++...|+++|++++
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 160 (256)
T 1geg_A 81 DVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR 160 (256)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence 9999999987777788899999999999999999999999999998766 689999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++.++.|+++.||+||+|+||+++|+|.+..
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 193 (256)
T 1geg_A 161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEI 193 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHH
T ss_pred HHHHHHHHHHHHcCeEEEEEEECCCccchhhhh
Confidence 999999999999999999999999999997654
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=270.54 Aligned_cols=196 Identities=33% Similarity=0.495 Sum_probs=179.6
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+ .+..+.+|++|.++++++++++.+
T Consensus 23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHH
Confidence 3456889999999999999999999999999999999999988887777775444 688899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC----CeEEEEecCCccCcCCCCc-
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV----GSIVFISSVGGLSHVGSGS- 165 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~----~~iv~~ss~~~~~~~~~~~- 165 (218)
.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++. ++||++||.++..+.++..
T Consensus 102 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~ 180 (276)
T 2b4q_A 102 LS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAY 180 (276)
T ss_dssp HC-SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCT
T ss_pred hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCcc
Confidence 98 69999999999887778888999999999999999999999999999987655 8999999999988888888
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.|+++|++++++++.++.|+++.||+||+|+||+++|+|.+..
T Consensus 181 ~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 223 (276)
T 2b4q_A 181 AYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI 223 (276)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc
Confidence 9999999999999999999999999999999999999997754
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-41 Score=268.56 Aligned_cols=198 Identities=28% Similarity=0.351 Sum_probs=177.8
Q ss_pred CCCccCCcEEEEecCC-CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGT-RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~-~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+...+++|++|||||+ +|||+++|++|+++|++|++++|+.+..++..+++... ...+..+++|++|.++++++++++
T Consensus 16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence 3456889999999998 59999999999999999999999999988888877544 367999999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCCCchh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
.+++ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|.++ +.++||++||..+..+.++...|
T Consensus 96 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 174 (266)
T 3o38_A 96 VEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHY 174 (266)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHH
T ss_pred HHHh-CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchH
Confidence 9999 699999999998877888899999999999999999999999999999876 66899999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++|+++++|++.++.|+++.||+||+|+||+++|++.+...
T Consensus 175 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 216 (266)
T 3o38_A 175 AAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS 216 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC
Confidence 999999999999999999999999999999999999987653
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=267.60 Aligned_cols=189 Identities=32% Similarity=0.411 Sum_probs=168.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|++|||||++|||++++++|+++|++|++++|+. +.+++. +...+..+..+++|++|.++++++++++.+++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAA---IRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHH---HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHH---HHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 46799999999999999999999999999999999988 665542 23334568889999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|+
T Consensus 81 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 159 (249)
T 2ew8_A 81 -GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA 159 (249)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHH
Confidence 6999999999987777788899999999999999999999999999998877789999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++++++++.|++++||+||+|+||+++|++.+
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 193 (249)
T 2ew8_A 160 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTE 193 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence 9999999999999999999999999999999976
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=272.07 Aligned_cols=198 Identities=28% Similarity=0.382 Sum_probs=177.6
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC-hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..++++||++|||||++|||+++|++|+++|++|++++|+ .+..+...+.+...+..+..+++|+++.++++++++++.
T Consensus 23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 102 (271)
T 4iin_A 23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV 102 (271)
T ss_dssp -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999994 555566666666667789999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++.++||++||.++..+.++...|++
T Consensus 103 ~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 181 (271)
T 4iin_A 103 QSD-GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSA 181 (271)
T ss_dssp HHH-SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH
T ss_pred Hhc-CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHH
Confidence 998 6999999999998877888899999999999999999999999999999888899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+|++++++++.++.|++++||+||+|+||+++|+|.+...
T Consensus 182 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 221 (271)
T 4iin_A 182 SKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK 221 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------
T ss_pred HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc
Confidence 9999999999999999999999999999999999987654
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-42 Score=273.86 Aligned_cols=193 Identities=25% Similarity=0.314 Sum_probs=172.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC---hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
.++++||++|||||++|||+++|++|+++|++|++++|. .+.+++..+++...+..+..+++|++|.++++++++++
T Consensus 6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 457889999999999999999999999999999997654 45566777777777788999999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
.+++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+..+.++...|+
T Consensus 86 ~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~Y~ 162 (262)
T 3ksu_A 86 EKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYSTYA 162 (262)
T ss_dssp HHHH-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCCCCC--
T ss_pred HHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCCCchhH
Confidence 9999 79999999999988888889999999999999999999999999999943 47999999999988889999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+||+++++|+++++.|+++.|||||+|+||+|+|+|.+.
T Consensus 163 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 201 (262)
T 3ksu_A 163 GNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYG 201 (262)
T ss_dssp ---CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence 999999999999999999999999999999999999865
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=267.52 Aligned_cols=194 Identities=27% Similarity=0.347 Sum_probs=160.3
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+.
T Consensus 4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999998888888777788999999999999999999999999
Q ss_pred cCCcccEEEecCCCC---CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 92 FNGKLNILVNNVGTN---IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 92 ~~~~id~vv~~ag~~---~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+ +++|+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+. ++...|+
T Consensus 84 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~ 159 (253)
T 3qiv_A 84 F-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG 159 (253)
T ss_dssp H-SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred c-CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence 9 6999999999983 4456778999999999999999999999999999998888999999998876 4567899
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++|++++++++.++.|+++.||+||+|+||+++|++.+...
T Consensus 160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 200 (253)
T 3qiv_A 160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT 200 (253)
T ss_dssp CCHHHHHHHHHHHHHHTTTTTEEEEEEEC------------
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC
Confidence 99999999999999999999999999999999999887543
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=267.12 Aligned_cols=194 Identities=34% Similarity=0.474 Sum_probs=179.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++++|++|||||+||||++++++|+++|++|++++|+.+.+++..+++...+..+..+.+|++|.++++++++++.+.+
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999999988887777776666678889999999999999999999998
Q ss_pred CCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|
T Consensus 90 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 168 (260)
T 2zat_A 90 -GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSK 168 (260)
T ss_dssp -SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence 69999999999764 3567788999999999999999999999999999888778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++.++.|+++.|||||+|+||+++|++.+.
T Consensus 169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 204 (260)
T 2zat_A 169 TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQV 204 (260)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEECcccCccchh
Confidence 999999999999999999999999999999998764
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-41 Score=267.45 Aligned_cols=191 Identities=30% Similarity=0.391 Sum_probs=176.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++ +..+..+.+|+++.++++++++++.+++
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 77 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF- 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-
Confidence 467899999999999999999999999999999999988877666554 3457888999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++.++||++||.++..+.++...|+++|++
T Consensus 78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 157 (254)
T 1hdc_A 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence 68999999999877677788999999999999999999999999999988777899999999999998999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++.|+++.||+||+|+||+++|++.+..
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 192 (254)
T 1hdc_A 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAET 192 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecccCcCcccccc
Confidence 99999999999999999999999999999998764
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=269.51 Aligned_cols=193 Identities=25% Similarity=0.298 Sum_probs=171.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++||++|||||++|||+++|++|+++|++|+++ +|+.+..+...+++...+..+..+++|++|.++++++++++.++
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999988 67777777777777766778899999999999999999999999
Q ss_pred cCCcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhhh
Q 027816 92 FNGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGA 169 (218)
Q Consensus 92 ~~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~~ 169 (218)
+ +++|++|||||.. ...++.+.+.++|++.+++|+.|+++++++++|+|.+ .++||++||.++. .+.++...|++
T Consensus 84 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~a 160 (259)
T 3edm_A 84 F-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYAT 160 (259)
T ss_dssp H-CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHH
T ss_pred h-CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHH
Confidence 9 7999999999976 5677889999999999999999999999999999976 4799999999888 67888999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
||+++++|+++++.|+++. ||||+|+||+++|+|.+...
T Consensus 161 sKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~ 199 (259)
T 3edm_A 161 SKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFT 199 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------
T ss_pred HHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccccc
Confidence 9999999999999999887 99999999999999987653
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=266.31 Aligned_cols=191 Identities=32% Similarity=0.432 Sum_probs=174.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+++|++|||||+||||++++++|+++|++|++++|+.+ +...+++...+..+..+.+|++|.++++++++++.+++ +
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g 78 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-G 78 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-S
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-C
Confidence 57899999999999999999999999999999999876 44445554445678889999999999999999999999 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||.++..+.++...|+++|+++
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 158 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGV 158 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence 99999999998776777888999999999999999999999999999988779999999999999989999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++.++.|+++.||+||+|+||+++||+.+..
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 192 (255)
T 2q2v_A 159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQ 192 (255)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHH
T ss_pred HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhh
Confidence 9999999999999999999999999999997653
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=269.10 Aligned_cols=192 Identities=30% Similarity=0.341 Sum_probs=174.7
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++++||++|||||++|||+++|++|+++|++|+++++ +.+..+...+++...+..+..+++|++|.++++++++++.+
T Consensus 26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999988855 45667777777777777899999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-CCCCchhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-VGSGSIYGA 169 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-~~~~~~Y~~ 169 (218)
.+ |++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+..+ .++...|++
T Consensus 106 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~a 182 (271)
T 3v2g_A 106 AL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSA 182 (271)
T ss_dssp HH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHH
T ss_pred Hc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHH
Confidence 99 69999999999988788889999999999999999999999999999864 479999999776654 788999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+|+++++|+++++.|+++.|||||+|+||+|+|+|.+
T Consensus 183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~ 219 (271)
T 3v2g_A 183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNP 219 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSC
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccc
Confidence 9999999999999999999999999999999999864
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=271.86 Aligned_cols=195 Identities=28% Similarity=0.415 Sum_probs=178.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCC---eEEEEEeeCCCHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+. .+..+.+|++|.++++++++++
T Consensus 21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999999888877777765544 6889999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCC--CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-CCCc
Q 027816 89 GSKFNGKLNILVNNVGTNIRKP--TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGS 165 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~--~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-~~~~ 165 (218)
.+++ +++|+||||||.....+ +.+.+.++|++.+++|+.++++++++++|+|.+++ ++||++||.++..+. ++..
T Consensus 101 ~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~ 178 (297)
T 1xhl_A 101 LAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYP 178 (297)
T ss_dssp HHHH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSH
T ss_pred HHhc-CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcc
Confidence 9999 69999999999876555 77889999999999999999999999999998776 899999999988887 8899
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.|+++|++++++++.++.|++++||+||+|+||+++|+|.+..
T Consensus 179 ~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~ 221 (297)
T 1xhl_A 179 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM 221 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc
Confidence 9999999999999999999999999999999999999997654
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=268.36 Aligned_cols=188 Identities=22% Similarity=0.250 Sum_probs=164.0
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..+++++|++|||||++|||+++|++|+++|++|++++|+.++..+..+.. + +..+.+|+++.++++++++++.+
T Consensus 21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G--AVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T--CEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C--CeEEECCCCCHHHHHHHHHHHHH
Confidence 457789999999999999999999999999999999999987765444332 2 67889999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++ +++|+||||||.....+ .+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..+.++...|++|
T Consensus 96 ~~-g~iD~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 173 (260)
T 3gem_A 96 QT-SSLRAVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCAT 173 (260)
T ss_dssp HC-SCCSEEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHH
T ss_pred hc-CCCCEEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHH
Confidence 99 79999999999876554 56788999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
|+++++|+++++.|+++ +|+||+|+||+++|++..
T Consensus 174 Kaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~ 208 (260)
T 3gem_A 174 KAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKD 208 (260)
T ss_dssp HHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC----
T ss_pred HHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCC
Confidence 99999999999999988 699999999999999754
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=274.62 Aligned_cols=198 Identities=24% Similarity=0.291 Sum_probs=181.8
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-------HHHHHHHhhhCCCeEEEEEeeCCCHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-------LNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 83 (218)
...+++||++|||||++|||+++|++|+++|++|++++|+.+. +++..+++...+..+..+++|++|.+++++
T Consensus 39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~ 118 (346)
T 3kvo_A 39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA 118 (346)
T ss_dssp CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence 4457889999999999999999999999999999999998774 456666666777889999999999999999
Q ss_pred HHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc--C
Q 027816 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--V 161 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--~ 161 (218)
+++++.+++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+ .
T Consensus 119 ~~~~~~~~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~ 197 (346)
T 3kvo_A 119 AVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWF 197 (346)
T ss_dssp HHHHHHHHH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGT
T ss_pred HHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCC
Confidence 999999999 6999999999998888889999999999999999999999999999999888899999999998877 7
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeeccc-ccChhhHHHHh
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWY-TKTSLVERVMF 210 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~-v~t~~~~~~~~ 210 (218)
++...|+++|++++++++.++.|++ .||+||+|+||+ ++|++.+....
T Consensus 198 ~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~ 246 (346)
T 3kvo_A 198 KQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG 246 (346)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc
Confidence 8889999999999999999999999 999999999995 99999886543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=270.24 Aligned_cols=189 Identities=29% Similarity=0.423 Sum_probs=170.1
Q ss_pred cccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 8 ~~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
...+..+++||++|||||++|||+++|++|+++|++|++++|+.+... ..+..+++|++|.+++++++++
T Consensus 5 ~~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~ 74 (269)
T 3vtz_A 5 HHHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----------NVSDHFKIDVTNEEEVKEAVEK 74 (269)
T ss_dssp -----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----------TSSEEEECCTTCHHHHHHHHHH
T ss_pred ccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----------CceeEEEecCCCHHHHHHHHHH
Confidence 344556789999999999999999999999999999999999876531 1356788999999999999999
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+.+.+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..+.++...|
T Consensus 75 ~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 153 (269)
T 3vtz_A 75 TTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAY 153 (269)
T ss_dssp HHHHH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHH
T ss_pred HHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhH
Confidence 99999 79999999999987778888999999999999999999999999999998878999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++||+++++|+++++.|+++ +|+||+|+||+|+|+|.+..
T Consensus 154 ~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~ 193 (269)
T 3vtz_A 154 VTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKA 193 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhh
Confidence 99999999999999999988 89999999999999998654
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=270.79 Aligned_cols=191 Identities=21% Similarity=0.214 Sum_probs=174.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec-CChhhHHHHHHHhh-hCCCeEEEEEeeCCCHH-----------
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQ-SKGFVVSGSVCDAASPD----------- 79 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~----------- 79 (218)
.++++|++|||||++|||++++++|+++|++|++++ |+.+.++...+++. ..+..+..+++|+++.+
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA 84 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence 357899999999999999999999999999999999 99988887777775 44567889999999999
Q ss_pred ------HHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCC--------------HHHHHHHHHhhhhhHHHHHHHHhH
Q 027816 80 ------QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS--------------AEEYSKIMTTNFESTYHLCQLVYP 139 (218)
Q Consensus 80 ------~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~--------------~~~~~~~~~~nv~~~~~~~~~~~~ 139 (218)
+++++++++.+++ +++|+||||||.....++.+.+ .++|++.+++|+.++++++++++|
T Consensus 85 ~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 163 (291)
T 1e7w_A 85 PVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 163 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999999 7999999999987777778888 999999999999999999999999
Q ss_pred HhHhCC------CCeEEEEecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 140 LLKASG------VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 140 ~l~~~~------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+|.+++ .++||++||..+..+.++...|+++|+++++|+++++.|+++.||+||+|+||+++|+|
T Consensus 164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 234 (291)
T 1e7w_A 164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 234 (291)
T ss_dssp HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred HHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence 998876 68999999999999999999999999999999999999999999999999999999998
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=268.90 Aligned_cols=193 Identities=30% Similarity=0.418 Sum_probs=176.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCC---eEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+. .+..+.+|++|.++++++++++.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999888877777755444 688999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCC----CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-CCCc
Q 027816 91 KFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGS 165 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~----~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-~~~~ 165 (218)
++ +++|+||||||.....+ +.+.+.++|++.+++|+.++++++++++|+|.+++ ++||++||..+..+. ++..
T Consensus 83 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~ 160 (280)
T 1xkq_A 83 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL 160 (280)
T ss_dssp HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred hc-CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCccc
Confidence 99 69999999999876555 67889999999999999999999999999998766 899999999988887 8889
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.|+++|+++++++++++.|++++||+||+|+||+++|+|.+..
T Consensus 161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 203 (280)
T 1xkq_A 161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM 203 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccc
Confidence 9999999999999999999999999999999999999997653
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=266.80 Aligned_cols=194 Identities=28% Similarity=0.371 Sum_probs=168.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ ...+..+.+|+++.++++++++++.+.
T Consensus 4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (261)
T 3n74_A 4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK 80 (261)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45788999999999999999999999999999999999999888777665 345888999999999999999999999
Q ss_pred cCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC----CCeEEEEecCCccCcCCCCch
Q 027816 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG----VGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~----~~~iv~~ss~~~~~~~~~~~~ 166 (218)
+ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++...
T Consensus 81 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~ 159 (261)
T 3n74_A 81 F-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW 159 (261)
T ss_dssp H-SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred c-CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence 9 69999999999865 56677789999999999999999999999999998753 578999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++|+++++|+++++.|+++.||+||+|+||+++|++.+...
T Consensus 160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 202 (261)
T 3n74_A 160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM 202 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc
Confidence 9999999999999999999999999999999999999987653
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=264.02 Aligned_cols=188 Identities=29% Similarity=0.414 Sum_probs=173.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||+||||++++++|+++|++|++++|+.+. ++..+++. . ..+++|++|.++++++++++.+++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~- 75 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL- 75 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 4679999999999999999999999999999999999877 65555543 3 678899999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||.++..+.++...|+++|++
T Consensus 76 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 155 (256)
T 2d1y_A 76 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG 155 (256)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHH
Confidence 69999999999887778889999999999999999999999999999998877999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.++.|+++.||+||+|+||+++|++.+..
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 190 (256)
T 2d1y_A 156 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEA 190 (256)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred HHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhc
Confidence 99999999999999999999999999999997763
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=263.94 Aligned_cols=186 Identities=27% Similarity=0.371 Sum_probs=171.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++ + +..+.+|++|.++++++++++.+++
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~- 75 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHL- 75 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 467899999999999999999999999999999999988776655443 2 6778999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||.+ ..+.++...|+++|++
T Consensus 76 g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a 154 (245)
T 1uls_A 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAG 154 (245)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHH
Confidence 799999999998777778889999999999999999999999999999887779999999998 7888889999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++++++++.|+.+.||+||+|+||+++|+|.+
T Consensus 155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 187 (245)
T 1uls_A 155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTA 187 (245)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTS
T ss_pred HHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchh
Confidence 999999999999999999999999999999865
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-40 Score=263.96 Aligned_cols=189 Identities=31% Similarity=0.399 Sum_probs=175.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||+||||++++++|+++|++|++++|+.++.++..+++.. .+..+++|++|.++++++++++.+++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~- 79 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF- 79 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc-
Confidence 46799999999999999999999999999999999999887776666543 37788999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++.++||++||.++..+.++...|+++|++
T Consensus 80 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 159 (260)
T 1nff_A 80 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA 159 (260)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence 68999999999887778888999999999999999999999999999988777899999999999998999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++++.++.|+++.||+||+|+||+++|++.+
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 192 (260)
T 1nff_A 160 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD 192 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred HHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence 999999999999999999999999999999865
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=263.81 Aligned_cols=189 Identities=32% Similarity=0.392 Sum_probs=176.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++ +..+..+++|++|.++++++++++.+++
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 78 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL- 78 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 567999999999999999999999999999999999998877766665 3457889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ ++||++||.++..+.++...|+++|++
T Consensus 79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (253)
T 1hxh_A 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence 6999999999988777888999999999999999999999999999998877 999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccC--CeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKD--NIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~--gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++.++.|+++. ||+||+|+||+++||+.+.
T Consensus 158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~ 193 (253)
T 1hxh_A 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhh
Confidence 999999999999988 9999999999999999876
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=269.77 Aligned_cols=198 Identities=23% Similarity=0.217 Sum_probs=169.4
Q ss_pred cccccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhh-hCCCeEEEEEeeCCC----HH
Q 027816 6 SSFKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQ-SKGFVVSGSVCDAAS----PD 79 (218)
Q Consensus 6 ~~~~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~-~~~~~v~~~~~D~~~----~~ 79 (218)
+.+.++..++++|++|||||++|||+++|++|+++|++|++++|+. +..++..+++. ..+..+..+++|+++ .+
T Consensus 12 ~~~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~ 91 (288)
T 2x9g_A 12 SGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPA 91 (288)
T ss_dssp ----------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHH
T ss_pred cccCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHH
Confidence 3444566678999999999999999999999999999999999998 77777777665 445678899999999 99
Q ss_pred HHHHHHHHHHhhcCCcccEEEecCCCCCCCCC-----CC-----CCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC----
Q 027816 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPT-----IE-----YSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---- 145 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~-----~~-----~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---- 145 (218)
+++++++++.+.+ +++|+||||||.....++ .+ .+.++|++.+++|+.+++++++.++|+|.+++
T Consensus 92 ~v~~~~~~~~~~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~ 170 (288)
T 2x9g_A 92 SCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCT 170 (288)
T ss_dssp HHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCC
Confidence 9999999999998 699999999998766666 56 78899999999999999999999999998765
Q ss_pred --CCeEEEEecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 146 --VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 146 --~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.++||++||.++..+.++...|++||+++++|++.++.|+++.||+||+|+||+++|+|
T Consensus 171 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 171 SSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred CCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 68999999999999999999999999999999999999999999999999999999998
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=269.58 Aligned_cols=194 Identities=20% Similarity=0.255 Sum_probs=166.8
Q ss_pred CCCccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+..+++||++|||||+| |||+++|++|+++|++|++++|+++..+. .+++......+..+++|++|.++++++++++
T Consensus 25 ~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (293)
T 3grk_A 25 QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEELGAFVAGHCDVADAASIDAVFETL 103 (293)
T ss_dssp --CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHHTCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCCceEEECCCCCHHHHHHHHHHH
Confidence 34568899999999994 59999999999999999999999654333 3333232235788999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC
Q 027816 89 GSKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~ 164 (218)
.+++ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||.++..+.++.
T Consensus 104 ~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~ 180 (293)
T 3grk_A 104 EKKW-GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNY 180 (293)
T ss_dssp HHHT-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTT
T ss_pred HHhc-CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCch
Confidence 9999 69999999999875 467788999999999999999999999999999975 5799999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
..|++||+++++|+++++.|++++||+||+|+||+|+|+|.+..
T Consensus 181 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 224 (293)
T 3grk_A 181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI 224 (293)
T ss_dssp THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc
Confidence 99999999999999999999999999999999999999987653
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=269.34 Aligned_cols=193 Identities=28% Similarity=0.309 Sum_probs=174.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhH-HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++||++|||||++|||+++|++|+++|++|++++|+.+.. +...+.+...+..+..+++|++|.++++++++++.++
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999987643 4444445555678999999999999999999999999
Q ss_pred cCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|+|++ .++||++||..+..+.++...|+++
T Consensus 123 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as 199 (291)
T 3ijr_A 123 L-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSAT 199 (291)
T ss_dssp H-SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHH
T ss_pred c-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHH
Confidence 9 79999999999864 356778899999999999999999999999999854 4799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+++++|+++++.|++++||+||+|+||+|+|+|.+..
T Consensus 200 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 237 (291)
T 3ijr_A 200 KGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS 237 (291)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc
Confidence 99999999999999999999999999999999997654
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=269.20 Aligned_cols=191 Identities=27% Similarity=0.256 Sum_probs=173.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh--hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.+++||++|||||++|||+++|++|+++|++|++++|+. +..+...+.+...+..+..+++|++|.++++++++++.+
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999998873 344555555556667889999999999999999999999
Q ss_pred hcCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 91 KFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
++ +++|++|||||... ..++.+.+.++|++.+++|+.|+++++++++|+|.+ .++||++||.++..+.++...|++
T Consensus 125 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~a 201 (294)
T 3r3s_A 125 AL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAA 201 (294)
T ss_dssp HH-TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHH
T ss_pred Hc-CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHH
Confidence 99 69999999999864 456788999999999999999999999999999865 379999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+|+++++|++.++.|+++.||+||+|+||+|+|+|..
T Consensus 202 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~ 238 (294)
T 3r3s_A 202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQI 238 (294)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccc
Confidence 9999999999999999999999999999999999854
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=268.81 Aligned_cols=192 Identities=25% Similarity=0.367 Sum_probs=170.3
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++ |++|||||++|||++++++|+++|++|++++|+.+.+++..+++... ..+..+.+|++|.++++++++++.+.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 95 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF 95 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4556 89999999999999999999999999999999998888777776543 568889999999999999999999998
Q ss_pred CCcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCC-eEEEEecCCccCcCCCCchhhhh
Q 027816 93 NGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~-~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+++|+||||||.... .++.+.+.++|++.+++|+.+++++++.++|+|.+++.+ +||++||..+..+.++...|+++
T Consensus 96 -g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~as 174 (272)
T 2nwq_A 96 -ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGT 174 (272)
T ss_dssp -SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHH
Confidence 699999999998653 677889999999999999999999999999999887778 99999999999998999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++++|++.++.|+++.|||||+|+||+++|+|.+.
T Consensus 175 Kaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~ 211 (272)
T 2nwq_A 175 KAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV 211 (272)
T ss_dssp HHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc
Confidence 9999999999999999999999999999999999764
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=266.08 Aligned_cols=191 Identities=25% Similarity=0.278 Sum_probs=176.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++... +..+..+.+|++|.++++++++++.++
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 578999999999999999999999999999999999998887777666532 336888999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ + +|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.++...|+++|
T Consensus 84 ~-g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 161 (260)
T 2z1n_A 84 G-G-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMR 161 (260)
T ss_dssp T-C-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHT
T ss_pred c-C-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHH
Confidence 8 5 9999999998777778889999999999999999999999999999887779999999999999989999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++++++.++.|+++.||+||+|+||+++|++.+
T Consensus 162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 196 (260)
T 2z1n_A 162 LPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVR 196 (260)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence 99999999999999999999999999999999876
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=265.70 Aligned_cols=195 Identities=26% Similarity=0.375 Sum_probs=174.9
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+.+++++|++|||||++|||++++++|+++|++|++++|+.+. .+...+++...+..+..+.+|+++.++++++++++.
T Consensus 23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999998754 455556665556678899999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC-Cchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-GSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-~~~Y~ 168 (218)
+.+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+| .+.++||++||.++..+.+. ...|+
T Consensus 103 ~~~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~ 179 (283)
T 1g0o_A 103 KIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYS 179 (283)
T ss_dssp HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHH
T ss_pred HHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchH
Confidence 998 699999999998777778889999999999999999999999999998 34589999999988887664 88999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+||+++++|+++++.|+++.||+||+|+||+++|+|.+..
T Consensus 180 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 219 (283)
T 1g0o_A 180 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAV 219 (283)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhh
Confidence 9999999999999999999999999999999999997764
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=268.17 Aligned_cols=187 Identities=30% Similarity=0.418 Sum_probs=169.9
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+..+++||++|||||++|||+++|++|+++|++|++++|+.+.... ...+.+|+++.++++++++++.+
T Consensus 22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~~~~~~~~~~~ 90 (266)
T 3uxy_A 22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----------DLHLPGDLREAAYADGLPGAVAA 90 (266)
T ss_dssp ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----------SEECCCCTTSHHHHHHHHHHHHH
T ss_pred hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----------hhccCcCCCCHHHHHHHHHHHHH
Confidence 4557889999999999999999999999999999999998764321 13457999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+ +++|+||||||....+++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++...|++|
T Consensus 91 ~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 169 (266)
T 3uxy_A 91 GL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLT 169 (266)
T ss_dssp HH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHH
T ss_pred hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHH
Confidence 99 69999999999988788889999999999999999999999999999998878999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++++++++++.|+++.||+||+|+||+++|+|.+...
T Consensus 170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 208 (266)
T 3uxy_A 170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF 208 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh
Confidence 999999999999999999999999999999999987654
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-41 Score=276.45 Aligned_cols=197 Identities=26% Similarity=0.312 Sum_probs=179.6
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC----------hhhHHHHHHHhhhCCCeEEEEEeeCCCHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN----------EVELNKCLKEWQSKGFVVSGSVCDAASPD 79 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 79 (218)
..+..++||++|||||++|||+++|++|+++|++|++++|+ .+..++..+++...+..+..+.+|++|.+
T Consensus 20 ~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 99 (322)
T 3qlj_A 20 GSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWD 99 (322)
T ss_dssp --CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHH
T ss_pred chhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHH
Confidence 34456789999999999999999999999999999999987 66777778888777788999999999999
Q ss_pred HHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC------CCeEEEEe
Q 027816 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG------VGSIVFIS 153 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~------~~~iv~~s 153 (218)
+++++++++.+++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+.+ .++||++|
T Consensus 100 ~v~~~~~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is 178 (322)
T 3qlj_A 100 QAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS 178 (322)
T ss_dssp HHHHHHHHHHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred HHHHHHHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence 9999999999999 6999999999998877888999999999999999999999999999987532 37999999
Q ss_pred cCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 154 SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 154 s~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|.++..+.++...|++||+++++|+++++.|++++||+||+|+|| ++|+|.+..
T Consensus 179 S~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~ 232 (322)
T 3qlj_A 179 SGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETV 232 (322)
T ss_dssp CHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCS
T ss_pred CHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhh
Confidence 999999999999999999999999999999999999999999999 999987643
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=270.58 Aligned_cols=192 Identities=23% Similarity=0.321 Sum_probs=171.6
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC------------hhhHHHHHHHhhhCCCeEEEEEeeCCCH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------------EVELNKCLKEWQSKGFVVSGSVCDAASP 78 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 78 (218)
++.+++||++|||||++|||+++|++|+++|++|++++|+ .+.+++...++...+..+..+++|++|.
T Consensus 4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 83 (287)
T 3pxx_A 4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR 83 (287)
T ss_dssp SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence 4457889999999999999999999999999999999987 6666666666666677899999999999
Q ss_pred HHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc
Q 027816 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL 158 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~ 158 (218)
++++++++++.+++ +++|+||||||..... .+.+.++|++.+++|+.|+++++++++|+| .+.++||++||.++.
T Consensus 84 ~~v~~~~~~~~~~~-g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~ 158 (287)
T 3pxx_A 84 AAVSRELANAVAEF-GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGL 158 (287)
T ss_dssp HHHHHHHHHHHHHH-SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHH
T ss_pred HHHHHHHHHHHHHc-CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhc
Confidence 99999999999999 6999999999986544 347889999999999999999999999999 334799999998877
Q ss_pred CcC-----------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 159 SHV-----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 159 ~~~-----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.+. ++...|+++|+++++|++.++.|++++||+||+|+||+|+|+|.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 218 (287)
T 3pxx_A 159 IAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS 218 (287)
T ss_dssp HHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS
T ss_pred ccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence 655 6678899999999999999999999999999999999999999763
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=266.44 Aligned_cols=192 Identities=31% Similarity=0.416 Sum_probs=166.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh---hhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW---QSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++++|++|||||+||||++++++|+++|++|++++|+.+++++..+++ ...+..+..+.+|++|.++++++++++.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999998887777766 33345688899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCC----CHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCc-cCcCCCCc
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEY----SAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGS 165 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~----~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~-~~~~~~~~ 165 (218)
++ +++|+||||||.....++.+. +.++|++.+++|+.++++++++++|+|++++ ++||++||..+ ..+.++..
T Consensus 83 ~~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~ 160 (278)
T 1spx_A 83 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP 160 (278)
T ss_dssp HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred Hc-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCcc
Confidence 99 699999999998766667777 9999999999999999999999999998766 89999999998 88888999
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.|+++|++++++++.++.|++++||+||+|+||+++|++.+.
T Consensus 161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 202 (278)
T 1spx_A 161 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA 202 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccc
Confidence 999999999999999999999999999999999999998754
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-40 Score=262.47 Aligned_cols=193 Identities=26% Similarity=0.342 Sum_probs=176.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||+||||++++++|+++|++|++++|+.+..+...+++.. .+..+++|++|.++++++++++.++
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~d~~~v~~~~~~~~~~ 83 (263)
T 3ak4_A 7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---GGFAVEVDVTKRASVDAAMQKAIDA 83 (263)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999998877766554432 4678899999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++...|+++
T Consensus 84 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 162 (263)
T 3ak4_A 84 L-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSAS 162 (263)
T ss_dssp H-TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred c-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHH
Confidence 9 6899999999987767778899999999999999999999999999998776 6899999999999888899999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|++++++++.++.|+++.||+||+|+||+++|++.+..
T Consensus 163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 200 (263)
T 3ak4_A 163 KFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQERE 200 (263)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhh
Confidence 99999999999999999999999999999999997653
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=268.26 Aligned_cols=191 Identities=19% Similarity=0.227 Sum_probs=171.1
Q ss_pred CCccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..+++||++|||||+| |||+++|++|+++|++|++++|+++..+...+..... ..+..+++|++|.++++++++++.
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHH
Confidence 4567899999999997 9999999999999999999999976544443333222 236788999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCc
Q 027816 90 SKFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~ 165 (218)
+++ +++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||.++..+.++..
T Consensus 104 ~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~ 180 (296)
T 3k31_A 104 EEW-GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYN 180 (296)
T ss_dssp HHH-SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTT
T ss_pred HHc-CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCch
Confidence 999 799999999998754 67788999999999999999999999999999966 58999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.|++||+++++|+++++.|++++|||||+|+||+|+|+|.+
T Consensus 181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~ 221 (296)
T 3k31_A 181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASS 221 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhh
Confidence 99999999999999999999999999999999999999864
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=271.36 Aligned_cols=192 Identities=21% Similarity=0.294 Sum_probs=166.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC-----hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-----EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~-----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
++++|++|||||+||||+++|++|+++|++|++++|+ .+.++...+.+...+..+..+.+|++|.++++++++++
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~ 81 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI 81 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999987665 45555555555555677999999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-cCCCCchh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIY 167 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~~~~~~~Y 167 (218)
.+++ |++|+||||||....+++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++.. +.++...|
T Consensus 82 ~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y 160 (324)
T 3u9l_A 82 IGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPY 160 (324)
T ss_dssp HHHH-SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHH
T ss_pred HHHc-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhH
Confidence 9999 799999999999888888899999999999999999999999999999988889999999998884 45677899
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++||+++++++++++.|++++||+||+|+||+++|++..
T Consensus 161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~ 199 (324)
T 3u9l_A 161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNH 199 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC------
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchh
Confidence 999999999999999999999999999999999987653
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-40 Score=262.76 Aligned_cols=186 Identities=25% Similarity=0.360 Sum_probs=166.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++. ..+..+.+|++|.++++++++++.+++ +++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 76 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEW-CNID 76 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence 689999999999999999999999999999999988777766653 357888999999999999999999888 6899
Q ss_pred EEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 98 ILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 98 ~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
+||||||... ..++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++||+++++
T Consensus 77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 156 (248)
T 3asu_A 77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_dssp EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence 9999999863 456778899999999999999999999999999987777999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeeccccc-ChhhHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTK-TSLVER 207 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~-t~~~~~ 207 (218)
++++++.|+++.|||||+|+||+++ |+|.+.
T Consensus 157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~ 188 (248)
T 3asu_A 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNV 188 (248)
T ss_dssp HHHHHHHHTTTSCCEEEEEEECSBCC------
T ss_pred HHHHHHHHhhhcCcEEEEEeccccccCcchhh
Confidence 9999999999999999999999999 998653
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-40 Score=261.50 Aligned_cols=193 Identities=25% Similarity=0.251 Sum_probs=173.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHh---CCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAG---LGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
+++++|++|||||++|||++++++|++ +|++|++++|+.+.+++..+++... +..+..+++|+++.+++++++++
T Consensus 2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 367899999999999999999999999 8999999999998888877777543 56788999999999999999999
Q ss_pred HHh--hcCCccc--EEEecCCCCCC--CCCCC-CCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC--CCCeEEEEecCCcc
Q 027816 88 VGS--KFNGKLN--ILVNNVGTNIR--KPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKAS--GVGSIVFISSVGGL 158 (218)
Q Consensus 88 ~~~--~~~~~id--~vv~~ag~~~~--~~~~~-~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~--~~~~iv~~ss~~~~ 158 (218)
+.+ .+ +++| +||||||.... .++.+ .+.++|++.+++|+.|+++++++++|+|.++ +.++||++||.++.
T Consensus 82 ~~~~~~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~ 160 (259)
T 1oaa_A 82 VRELPRP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL 160 (259)
T ss_dssp HHHSCCC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred HHhcccc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence 988 55 5788 99999997543 45666 6899999999999999999999999999876 56899999999999
Q ss_pred CcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 159 SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 159 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.+.++...|++||+++++++++++.|+++ ||||+|+||+++|+|.+..
T Consensus 161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~ 208 (259)
T 1oaa_A 161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLA 208 (259)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHH
Confidence 99999999999999999999999999963 9999999999999998764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-40 Score=265.13 Aligned_cols=189 Identities=28% Similarity=0.346 Sum_probs=175.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||+||||+++|++|+++|++|++++|+.+..++..+++ ...+..+.+|++|.++++++++++.+++
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 77 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY- 77 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence 356899999999999999999999999999999999998877666543 3458889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.|++++++.++|+|++++.++||++||..+..+.++..+|++||++
T Consensus 78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 157 (281)
T 3m1a_A 78 GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAA 157 (281)
T ss_dssp SCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHH
Confidence 68999999999987778889999999999999999999999999999998878999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++++.++.|++++||+||+|+||+++|++..
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 190 (281)
T 3m1a_A 158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFG 190 (281)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCcccccccc
Confidence 999999999999999999999999999999864
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=261.41 Aligned_cols=193 Identities=29% Similarity=0.379 Sum_probs=171.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh-c
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK-F 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-~ 92 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...+..+..+++|++|.++++++++++.++ +
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 467899999999999999999999999999999999998888777777655667889999999999999999999886 7
Q ss_pred CCcccEEEecCCC--C-----CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCc
Q 027816 93 NGKLNILVNNVGT--N-----IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (218)
Q Consensus 93 ~~~id~vv~~ag~--~-----~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~ 165 (218)
+++|+||||||. . ...++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+. +..
T Consensus 82 -g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~ 159 (260)
T 2qq5_A 82 -GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNV 159 (260)
T ss_dssp -TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSH
T ss_pred -CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCC
Confidence 799999999953 2 2456778889999999999999999999999999988777999999999887654 468
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.|++||+++++++++++.|++++||+||+|+||+++|+|.+..
T Consensus 160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 202 (260)
T 2qq5_A 160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEH 202 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC---
T ss_pred chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHh
Confidence 9999999999999999999999999999999999999997653
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=257.85 Aligned_cols=198 Identities=31% Similarity=0.457 Sum_probs=180.5
Q ss_pred cccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 8 ~~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
+.++.+++++|++|||||+||||++++++|+++|++|++++|+.+..+...+++...+..+..+.+|++|.+++++++++
T Consensus 4 ~~~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (260)
T 3awd_A 4 MYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS 83 (260)
T ss_dssp CTTGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred ccccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 33445678899999999999999999999999999999999999888777777766566789999999999999999999
Q ss_pred HHhhcCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC--
Q 027816 88 VGSKFNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-- 164 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-- 164 (218)
+.+.+ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||.++..+.++.
T Consensus 84 ~~~~~-~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 162 (260)
T 3awd_A 84 VHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQ 162 (260)
T ss_dssp HHHHH-SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCC
T ss_pred HHHHc-CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCc
Confidence 99998 68999999999876 567788999999999999999999999999999988777899999999888877766
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
..|+++|++++.+++.++.|+.+.||++++|+||+++|++.+
T Consensus 163 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 204 (260)
T 3awd_A 163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR 204 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence 899999999999999999999999999999999999999987
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=260.24 Aligned_cols=184 Identities=30% Similarity=0.384 Sum_probs=169.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
||++|||||++|||+++|++|+++| ++|++.+|+.+.+++..+++ +..+..+++|++|.++++++++++.+++ +
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 77 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-G 77 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-S
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-C
Confidence 6899999999999999999999985 68999999998887776665 3468889999999999999999999999 7
Q ss_pred cccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 95 KLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 95 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
++|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|+|++++ ++||++||..+..+.++...|++||++
T Consensus 78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a 156 (254)
T 3kzv_A 78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA 156 (254)
T ss_dssp CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence 9999999999854 47788999999999999999999999999999998876 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|+++++.|+ .|||||+|+||+++|+|.+.
T Consensus 157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~ 188 (254)
T 3kzv_A 157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVN 188 (254)
T ss_dssp HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCC
T ss_pred HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHH
Confidence 999999999997 68999999999999998754
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=259.77 Aligned_cols=198 Identities=62% Similarity=1.007 Sum_probs=163.5
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+.+++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++...+..+..+.+|+++.++++++++++.+
T Consensus 8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 87 (266)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 44578899999999999999999999999999999999999888877777766666788999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+++++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 167 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT 167 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHH
Confidence 88558999999999877777888999999999999999999999999999988777899999999998888889999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|++++.+++.++.|+.+.||++++|+||++.|++.+..
T Consensus 168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 205 (266)
T 1xq1_A 168 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV 205 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred HHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhh
Confidence 99999999999999999999999999999999997654
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=263.02 Aligned_cols=188 Identities=23% Similarity=0.226 Sum_probs=166.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhC-CCeEEEEEeeCCCH----HHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVSGSVCDAASP----DQREKLIQE 87 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~----~~~~~~~~~ 87 (218)
++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++... +..+..+.+|+++. +++++++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 467899999999999999999999999999999999 888887777776543 55788899999999 999999999
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCH-----------HHHHHHHHhhhhhHHHHHHHHhHHhHhCCC------CeEE
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSA-----------EEYSKIMTTNFESTYHLCQLVYPLLKASGV------GSIV 150 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~-----------~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~------~~iv 150 (218)
+.+++ +++|+||||||.....++.+.+. ++|++.+++|+.++++++++++|+|. ++. ++||
T Consensus 88 ~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv 165 (276)
T 1mxh_A 88 SFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV 165 (276)
T ss_dssp HHHHH-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred HHHhc-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence 99998 68999999999877677778888 99999999999999999999999997 444 8999
Q ss_pred EEecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 151 FISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 151 ~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
++||..+..+.++...|+++|+++++|++.++.|+++.||+||+|+||+++||
T Consensus 166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 99999999999999999999999999999999999999999999999999998
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=256.78 Aligned_cols=190 Identities=24% Similarity=0.282 Sum_probs=172.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. ..+..+..+++|++|.++++++++++.+++ +
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g 79 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-G 79 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-S
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-C
Confidence 37899999999999999999999999999999999998888877765 446678999999999999999999999998 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|++|||||.....++.+.+.++|++.+++|+.|+++++++++|+|++. .+++|+++|..+..+.++...|+++|+++
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~ 158 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIPYGGGYVSTKWAA 158 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCCCcchHHHHHHHH
Confidence 99999999999888888999999999999999999999999999999554 47999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++++++++.+ ..|||||+|+||+++|+|.+...
T Consensus 159 ~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~ 191 (235)
T 3l77_A 159 RALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKP 191 (235)
T ss_dssp HHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCS
T ss_pred HHHHHHHhhc--CCCeEEEEEeCCccccccccccC
Confidence 9999999444 78999999999999999986543
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=261.04 Aligned_cols=184 Identities=28% Similarity=0.445 Sum_probs=160.5
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..++++|++|||||++|||++++++|+++|++|++++|+.+..++ +..+.+|++|.++++++++++.++
T Consensus 10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~D~~~~~~~~~~~~~~~~~ 78 (247)
T 1uzm_A 10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDSDAVDRAFTAVEEH 78 (247)
T ss_dssp CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-----------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-----------hcCeeccCCCHHHHHHHHHHHHHH
Confidence 446789999999999999999999999999999999998764321 113789999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|
T Consensus 79 ~-g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 157 (247)
T 1uzm_A 79 Q-GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK 157 (247)
T ss_dssp H-SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHH
Confidence 8 699999999998877778889999999999999999999999999999988779999999999999889999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++.++.|++++||+||+|+||+++|+|.+.
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 193 (247)
T 1uzm_A 158 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA 193 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh
Confidence 999999999999999999999999999999999764
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=262.42 Aligned_cols=187 Identities=30% Similarity=0.413 Sum_probs=166.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+.+ +..+..+++|+++.++++++++++.+++
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 77 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF- 77 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc-
Confidence 578999999999999999999999999999999999998887766554 3468889999999999999999999999
Q ss_pred CcccEEEecCCCCCCC-CC----CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 94 GKLNILVNNVGTNIRK-PT----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~-~~----~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+++|+||||||..... ++ .+.+.++|++.+++|+.++++++++++|+|.+++ ++||++||..+..+.++...|+
T Consensus 78 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~ 156 (281)
T 3zv4_A 78 GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYT 156 (281)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHH
T ss_pred CCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhH
Confidence 7999999999975432 22 3455778999999999999999999999998764 8999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+||+++++++++++.|+++. ||||+|+||+++|+|.+
T Consensus 157 asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~ 193 (281)
T 3zv4_A 157 ATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRG 193 (281)
T ss_dssp HHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CC
T ss_pred HHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCccc
Confidence 99999999999999999987 99999999999999863
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=261.75 Aligned_cols=194 Identities=27% Similarity=0.458 Sum_probs=174.9
Q ss_pred CCccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhH-HHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVEL-NKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 12 ~~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
.++++||++|||||+ +|||+++|++|+++|++|++++|+.+.. ++..+++.. .+.++..+++|++|.+++++++++
T Consensus 15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (267)
T 3gdg_A 15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD 94 (267)
T ss_dssp HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence 457889999999999 9999999999999999999998876554 455555542 356789999999999999999999
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC--CCCc
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--GSGS 165 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--~~~~ 165 (218)
+.+++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+. ++..
T Consensus 95 ~~~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~ 173 (267)
T 3gdg_A 95 VVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQT 173 (267)
T ss_dssp HHHHT-SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCH
T ss_pred HHHHc-CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCC
Confidence 99999 79999999999988888889999999999999999999999999999998888999999999888765 5788
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.|+++|++++++++.++.|+++. |+||+|+||+++|+|.+.
T Consensus 174 ~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~ 214 (267)
T 3gdg_A 174 SYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDF 214 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGG
T ss_pred cchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhh
Confidence 99999999999999999999887 999999999999999764
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=267.73 Aligned_cols=189 Identities=22% Similarity=0.221 Sum_probs=173.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec-CChhhHHHHHHHhh-hCCCeEEEEEeeCCCHH-------------
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS-RNEVELNKCLKEWQ-SKGFVVSGSVCDAASPD------------- 79 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~------------- 79 (218)
+++|++|||||++|||+++|++|+++|++|++++ |+.+.++...+++. ..+..+..+++|+++.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 7899999999999999999999999999999999 99988887777765 34567889999999999
Q ss_pred ----HHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCC--------------HHHHHHHHHhhhhhHHHHHHHHhHHh
Q 027816 80 ----QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYS--------------AEEYSKIMTTNFESTYHLCQLVYPLL 141 (218)
Q Consensus 80 ----~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~--------------~~~~~~~~~~nv~~~~~~~~~~~~~l 141 (218)
+++++++++.+.+ +++|+||||||.....++.+.+ .++|++.+++|+.++++++++++|+|
T Consensus 124 ~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 202 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV 202 (328)
T ss_dssp CHHHHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 6999999999987777777888 99999999999999999999999999
Q ss_pred HhCC------CCeEEEEecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 142 KASG------VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 142 ~~~~------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+++ .++||++||..+..+.++...|+++|+++++|++.|+.|+++.||+||+|+||+|+|+|
T Consensus 203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 203 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 271 (328)
T ss_dssp HHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred HhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence 8876 68999999999999999999999999999999999999999999999999999999998
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=261.49 Aligned_cols=192 Identities=26% Similarity=0.319 Sum_probs=176.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEE-ecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++.+|++|||||++|||+++|++|+++|++|++ ..|+.+..++..+++...+..+..+.+|++|.++++++++++.+.+
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 567899999999999999999999999999855 5678888888888887777789999999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhH-hCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~-~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.+++.|. +.+.++||++||.++..+.++...|+++|
T Consensus 103 -g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 181 (267)
T 4iiu_A 103 -GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAK 181 (267)
T ss_dssp -CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred -CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence 7999999999998877888899999999999999999999999998886 56678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++++++++.++.|+++.||+||+|+||+++|+|.+
T Consensus 182 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~ 216 (267)
T 4iiu_A 182 AGIIGATKALAIELAKRKITVNCIAPGLIDTGMIE 216 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCC
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccc
Confidence 99999999999999999999999999999999874
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=260.73 Aligned_cols=194 Identities=24% Similarity=0.367 Sum_probs=170.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++.+|+++||||++|||+++|++|+++|++|++++|+.+. .+...+.+...+..+..+++|++|.++++++++++.+++
T Consensus 4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF 83 (264)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4457999999999999999999999999999998666544 444444444545679999999999999999999999999
Q ss_pred CCcccEEEecCC--CCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecC-Cc-cCcCCCCchhh
Q 027816 93 NGKLNILVNNVG--TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV-GG-LSHVGSGSIYG 168 (218)
Q Consensus 93 ~~~id~vv~~ag--~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~-~~-~~~~~~~~~Y~ 168 (218)
+++|+|||||| .....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||. .+ ..+.++...|+
T Consensus 84 -g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~ 162 (264)
T 3i4f_A 84 -GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA 162 (264)
T ss_dssp -SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH
T ss_pred -CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH
Confidence 69999999999 445567788999999999999999999999999999998888999999987 43 55677889999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++|++++++++.++.|+++.||+||+|+||+++|+|.+..
T Consensus 163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 202 (264)
T 3i4f_A 163 AAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT 202 (264)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc
Confidence 9999999999999999999999999999999999997644
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-40 Score=263.18 Aligned_cols=187 Identities=27% Similarity=0.379 Sum_probs=168.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++. ..+..+++|++|.++++++++++.+++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~- 78 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEF- 78 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4678999999999999999999999999999999999988776665543 457889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+| ++ .++||++||..+. +.++...|+++|++
T Consensus 79 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a 155 (263)
T 2a4k_A 79 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLG 155 (263)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHH
Confidence 799999999998877778889999999999999999999999999999 54 6899999999988 77788999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++.++.|+++.||+||+|+||+++|+|.+.
T Consensus 156 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 189 (263)
T 2a4k_A 156 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAG 189 (263)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred HHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence 9999999999999999999999999999998753
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=258.01 Aligned_cols=183 Identities=26% Similarity=0.321 Sum_probs=163.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+. ...+ +..+.+|++|.++++++++++.+++
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~- 72 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYP--FATEVMDVADAAQVAQVCQRLLAET- 72 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCS--SEEEECCTTCHHHHHHHHHHHHHHC-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999999999998752 1111 6778999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+++|++
T Consensus 73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 152 (250)
T 2fwm_X 73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAA 152 (250)
T ss_dssp SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHH
Confidence 69999999999877778889999999999999999999999999999988777999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++.++.|++++||+||+|+||+++|++.+.
T Consensus 153 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 186 (250)
T 2fwm_X 153 LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT 186 (250)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred HHHHHHHHHHHhCccCCEEEEEECCcccCccccc
Confidence 9999999999999999999999999999999765
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=266.71 Aligned_cols=189 Identities=23% Similarity=0.305 Sum_probs=159.6
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||++|||+++|++|+++|++|++++|+.++.. +++ +..+..+++|++|.++++++++.+.+
T Consensus 4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~- 76 (257)
T 3tl3_A 4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADL---GDRARFAAADVTDEAAVASALDLAET- 76 (257)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHT---CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hhc---CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence 35678999999999999999999999999999999999665432 222 44688899999999999999998877
Q ss_pred cCCcccEEEecCCCCCCC----CCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh--------CCCCeEEEEecCCccC
Q 027816 92 FNGKLNILVNNVGTNIRK----PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA--------SGVGSIVFISSVGGLS 159 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~----~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~--------~~~~~iv~~ss~~~~~ 159 (218)
+ +++|++|||||..... +..+.+.++|++.+++|+.++++++++++|+|.+ ++.++||++||.++..
T Consensus 77 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (257)
T 3tl3_A 77 M-GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD 155 (257)
T ss_dssp H-SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred h-CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence 7 7999999999975432 2235899999999999999999999999999987 5568999999999999
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+.++...|++||+++++|+++++.|+++.||+||+|+||+|+|+|.+..
T Consensus 156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 204 (257)
T 3tl3_A 156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL 204 (257)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc
Confidence 9888999999999999999999999999999999999999999998754
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=258.96 Aligned_cols=192 Identities=18% Similarity=0.193 Sum_probs=171.5
Q ss_pred CccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCC-eEEEEEeeCCCHHHHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 13 ~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
++++||++|||||+ +|||+++|++|+++|++|++++|+.+..+...+....... .+..+++|++|.++++++++++.
T Consensus 3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence 46789999999999 6699999999999999999999987655444443333333 68899999999999999999999
Q ss_pred hhcCCcccEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCc
Q 027816 90 SKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS 165 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~ 165 (218)
+++ +++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||.++..+.++..
T Consensus 83 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~ 159 (266)
T 3oig_A 83 EQV-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYN 159 (266)
T ss_dssp HHH-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTH
T ss_pred HHh-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcc
Confidence 999 69999999999875 456778999999999999999999999999999864 47999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.|++||+++++|+++++.|+++.||+||+|+||+|+|+|.+.
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 201 (266)
T 3oig_A 160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKG 201 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTT
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence 999999999999999999999999999999999999998764
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=260.70 Aligned_cols=189 Identities=31% Similarity=0.443 Sum_probs=172.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+..+...+++. .+..+++|++|.++++++++++.+++
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~- 80 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF- 80 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4689999999999999999999999999999999999887776655542 37788999999999999999999999
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.++ .++||++||..+..+.++...|+++|+
T Consensus 81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa 159 (270)
T 1yde_A 81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKG 159 (270)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHH
Confidence 79999999999864 3567788999999999999999999999999999765 489999999988888889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++++.|++++||+||+|+||+++|+|.+..
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~ 195 (270)
T 1yde_A 160 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEEL 195 (270)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHH
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhh
Confidence 999999999999999999999999999999997654
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=255.47 Aligned_cols=194 Identities=25% Similarity=0.328 Sum_probs=178.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|++|||||+||||++++++|+++|++|++++| +.+..++..+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999999 7777777777776666778899999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++...|+++|
T Consensus 84 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK 162 (261)
T 1gee_A 84 -GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHH
Confidence 6899999999987766777889999999999999999999999999998876 68999999999999989999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++.+++.++.|+.+.||++++|+||+++|++.+..
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 199 (261)
T 1gee_A 163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEK 199 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc
Confidence 9999999999999999999999999999999998754
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-39 Score=258.44 Aligned_cols=182 Identities=29% Similarity=0.385 Sum_probs=169.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+. +..+..+++|++|.++++++++++.+++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 72 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY- 72 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999999999998754 2357788999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||.++..+.++...|+++|++
T Consensus 73 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 152 (264)
T 2dtx_A 73 GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHA 152 (264)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHH
Confidence 68999999999887778889999999999999999999999999999988777999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++.++.|+++. |+||+|+||+++|++.+..
T Consensus 153 ~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~ 186 (264)
T 2dtx_A 153 VIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKA 186 (264)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHH
T ss_pred HHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhh
Confidence 999999999999988 9999999999999997654
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=258.90 Aligned_cols=191 Identities=27% Similarity=0.403 Sum_probs=155.8
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+..+.++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++. ..+..+.+|+++.+++++++++.
T Consensus 7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~- 82 (249)
T 3f9i_A 7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKT- 82 (249)
T ss_dssp --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTC-
T ss_pred cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhc-
Confidence 45567889999999999999999999999999999999999998887776654 35788899999999988887654
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||.++..+.++...|++
T Consensus 83 ----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 158 (249)
T 3f9i_A 83 ----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCA 158 (249)
T ss_dssp ----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHH
T ss_pred ----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHH
Confidence 6899999999988777777888999999999999999999999999998887899999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+|+++++++++++.|+.+.||+||+|+||+++|++.+..
T Consensus 159 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 197 (249)
T 3f9i_A 159 SKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL 197 (249)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc
Confidence 999999999999999999999999999999999997653
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=260.74 Aligned_cols=186 Identities=25% Similarity=0.356 Sum_probs=168.7
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||++|||+++|++|+++|++|++++|+.+... ...+..+++|++|.++++++++++.++
T Consensus 23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 93 (260)
T 3un1_A 23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIER 93 (260)
T ss_dssp HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999876422 225888999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc--CCCCchhhh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--VGSGSIYGA 169 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--~~~~~~Y~~ 169 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++||..+..+ .++...|++
T Consensus 94 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~ 172 (260)
T 3un1_A 94 F-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL 172 (260)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred C-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence 9 6999999999998778888999999999999999999999999999999988899999999877643 445689999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
||+++++++++++.|+++.||+||+|+||+++|||.+.
T Consensus 173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 210 (260)
T 3un1_A 173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA 210 (260)
T ss_dssp HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH
Confidence 99999999999999999999999999999999998653
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=253.71 Aligned_cols=194 Identities=31% Similarity=0.412 Sum_probs=178.1
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||+||||++++++|+++|++|++++|+.+..+...+++...+..+..+.+|++|.++++++++++.+.
T Consensus 6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999998887777777665667888999999999999999999998
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++ +.+.++|++.+++|+.++++++++++|+|++++.++||++||..+..+.++..+|+++|
T Consensus 86 ~-~~~d~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 163 (255)
T 1fmc_A 86 L-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSK 163 (255)
T ss_dssp H-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHH
Confidence 8 689999999998766555 78899999999999999999999999999887778999999999988888999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++.+++.++.|+.+.||++++|+||++.|++.+.
T Consensus 164 ~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~ 199 (255)
T 1fmc_A 164 AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS 199 (255)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh
Confidence 999999999999999999999999999999998764
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-40 Score=262.70 Aligned_cols=185 Identities=28% Similarity=0.404 Sum_probs=160.8
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+..++++|+++||||++|||++++++|+++|++|++++|+.+.++ .+..+++|++|.++++++++++.+
T Consensus 15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (253)
T 2nm0_A 15 VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEE 83 (253)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHH
Confidence 445678999999999999999999999999999999999875432 167789999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||.++..+.++...|+++
T Consensus 84 ~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 162 (253)
T 2nm0_A 84 TH-GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAAS 162 (253)
T ss_dssp HT-CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHH
Confidence 98 79999999999887777888899999999999999999999999999988777899999999998888888999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++++++++.++.|+++.||+||+|+||+++|+|.+.
T Consensus 163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 199 (253)
T 2nm0_A 163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV 199 (253)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence 9999999999999999999999999999999999764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=259.55 Aligned_cols=193 Identities=20% Similarity=0.200 Sum_probs=166.1
Q ss_pred CCCccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+...+++|++|||||+ +|||+++|++|+++|++|++++|+....+ ..+++......+..+++|++|.++++++++++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 86 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RITEFAAEFGSELVFPCDVADDAQIDALFASL 86 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HHHHHHHHcCCcEEEECCCCCHHHHHHHHHHH
Confidence 4557789999999999 99999999999999999999999865433 33333333345788999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCC----CCCCC-CCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC
Q 027816 89 GSKFNGKLNILVNNVGTNIR----KPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~----~~~~~-~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~ 163 (218)
.+++ +++|+||||||.... .++.+ .+.++|++.+++|+.++++++++++|+|++ .++||++||.++..+.++
T Consensus 87 ~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~ 163 (271)
T 3ek2_A 87 KTHW-DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPN 163 (271)
T ss_dssp HHHC-SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTT
T ss_pred HHHc-CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCC
Confidence 9999 799999999998754 55565 899999999999999999999999999874 479999999999999999
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
...|+++|+++++|+++++.|+++.||+||+|+||+|+|+|.+.
T Consensus 164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 207 (271)
T 3ek2_A 164 YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASG 207 (271)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhc
Confidence 99999999999999999999999999999999999999998653
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=253.80 Aligned_cols=190 Identities=26% Similarity=0.377 Sum_probs=177.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-------eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+|++|||||+||||++++++|+++|+ +|++++|+.+..+...+++...+..+..+.+|+++.++++++++++.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 68999999999999999999999999 99999999988887777776666788999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.++...|++
T Consensus 82 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 160 (244)
T 2bd0_A 82 ERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM 160 (244)
T ss_dssp HHT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HhC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHH
Confidence 998 6899999999987777778889999999999999999999999999998777789999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|++++++++.++.|+.+.||++++|+||+++|||.+.
T Consensus 161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 198 (244)
T 2bd0_A 161 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK 198 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhh
Confidence 99999999999999999999999999999999998754
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=259.08 Aligned_cols=193 Identities=27% Similarity=0.344 Sum_probs=175.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|++|||||++|||++++++|+++|++|+++ +|+.+..++..+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999998874 788888888888887777889999999999999999999988776
Q ss_pred C-----CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 93 N-----GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 93 ~-----~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ +++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|+|++ .++||++||.++..+.++...|
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y 161 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAY 161 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHH
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchh
Confidence 2 24999999999987778888999999999999999999999999999843 4699999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|+++++|+++++.|+.+.||+||+|+||+++|+|.+..
T Consensus 162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 202 (255)
T 3icc_A 162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAEL 202 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTT
T ss_pred HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhh
Confidence 99999999999999999999999999999999999997654
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=261.04 Aligned_cols=192 Identities=20% Similarity=0.200 Sum_probs=170.1
Q ss_pred CCccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+.++++|++|||||+ +|||+++|++|+++|++|++++|+. .++..+++......+..+.+|+++.++++++++++.
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 98 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELG 98 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHH
Confidence 446789999999988 7799999999999999999999987 233344443444458889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCC----CCCCC-CCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC
Q 027816 90 SKFNGKLNILVNNVGTNIR----KPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~----~~~~~-~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~ 164 (218)
+.+ +++|+||||||.... .++.+ .+.++|++.+++|+.++++++++++|+|.++ .++||++||.++..+.++.
T Consensus 99 ~~~-g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~ 176 (280)
T 3nrc_A 99 KVW-DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSY 176 (280)
T ss_dssp HHC-SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTT
T ss_pred HHc-CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCc
Confidence 999 799999999998654 34444 8999999999999999999999999999866 5899999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
..|+++|+++++|+++++.|++++||+||+|+||+|+|+|.+.
T Consensus 177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 219 (280)
T 3nrc_A 177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASG 219 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhc
Confidence 9999999999999999999999999999999999999999764
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=260.49 Aligned_cols=197 Identities=23% Similarity=0.303 Sum_probs=178.8
Q ss_pred ccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 9 ~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+.+..++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++...+..+..+.+|++|.++++++++++
T Consensus 23 ~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 23 PKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp --CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHH
Confidence 33456788999999999999999999999999999999999998888777777666667899999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
.+.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+
T Consensus 103 ~~~~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 181 (272)
T 1yb1_A 103 KAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC 181 (272)
T ss_dssp HHHT-CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHH
T ss_pred HHHC-CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHH
Confidence 9998 689999999998777777788899999999999999999999999999888789999999999988888889999
Q ss_pred hhHHHHHHHHHHHHHHhc---cCCeEEEEeecccccChhhH
Q 027816 169 ATKAAMNQLTRNLACEWA---KDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~---~~gv~v~~v~PG~v~t~~~~ 206 (218)
++|++++.+++.++.|+. +.||+|++|+||+++|+|.+
T Consensus 182 ~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~ 222 (272)
T 1yb1_A 182 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK 222 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence 999999999999999997 67999999999999999854
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=259.51 Aligned_cols=196 Identities=27% Similarity=0.384 Sum_probs=177.1
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
....+++|+++||||+||||++++++|+++|++|++++|+.+..+...+++...+..+..+.+|++|.++++++++++.+
T Consensus 38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 117 (285)
T 2c07_A 38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 117 (285)
T ss_dssp CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999998888877777766566788999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..+.++...|+++
T Consensus 118 ~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 196 (285)
T 2c07_A 118 EH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS 196 (285)
T ss_dssp HC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred hc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHH
Confidence 98 68999999999887777888999999999999999999999999999987777899999999888888899999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++++.+++.++.|+.+.||+|++|+||+++|++.+.
T Consensus 197 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 233 (285)
T 2c07_A 197 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK 233 (285)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred HHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh
Confidence 9999999999999999999999999999999998764
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=259.01 Aligned_cols=191 Identities=27% Similarity=0.287 Sum_probs=169.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++|++|||||++|||+++|++|+++|++|+++ +|+.+..+...+.+...+..+..+.+|++|.++++++++++.+.+ +
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g 103 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-G 103 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence 57899999999999999999999999998776 888888888877777777889999999999999999999999999 6
Q ss_pred cccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC---CCCeEEEEecCCccCcCC-CCchhhh
Q 027816 95 KLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS---GVGSIVFISSVGGLSHVG-SGSIYGA 169 (218)
Q Consensus 95 ~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~---~~~~iv~~ss~~~~~~~~-~~~~Y~~ 169 (218)
++|+||||||.... .++.+.+.++|++.+++|+.|++++++.++|.|.+. +.++||++||.++..+.+ ....|++
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 183 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA 183 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence 99999999998764 677889999999999999999999999999998763 457999999998887765 6788999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|+++++|+++++.|+.+.||+|++|+||+|+|++.+.
T Consensus 184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 221 (272)
T 4e3z_A 184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS 221 (272)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence 99999999999999999999999999999999999765
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=257.46 Aligned_cols=192 Identities=25% Similarity=0.320 Sum_probs=173.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ +..+..+++|+++.++++++++++ ++
T Consensus 25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~ 100 (281)
T 3ppi_A 25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQ 100 (281)
T ss_dssp CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TT
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HH
Confidence 35688999999999999999999999999999999999999888877766 345888999999999999999999 77
Q ss_pred cCCcccEEEec-CCCCCCCCC-----CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh------CCCCeEEEEecCCccC
Q 027816 92 FNGKLNILVNN-VGTNIRKPT-----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA------SGVGSIVFISSVGGLS 159 (218)
Q Consensus 92 ~~~~id~vv~~-ag~~~~~~~-----~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~------~~~~~iv~~ss~~~~~ 159 (218)
+ +++|++||| ||......+ .+.+.++|++.+++|+.+++++++.+++.+.+ ++.++||++||.++..
T Consensus 101 ~-~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 179 (281)
T 3ppi_A 101 L-GRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE 179 (281)
T ss_dssp S-SEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred h-CCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence 7 699999999 555444433 36789999999999999999999999999986 4568999999999999
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+.++...|++||+|++++++.++.|+++.||+||+|+||+|+|+|.+..
T Consensus 180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 228 (281)
T 3ppi_A 180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV 228 (281)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc
Confidence 9999999999999999999999999999999999999999999998753
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=257.03 Aligned_cols=195 Identities=25% Similarity=0.343 Sum_probs=170.8
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+.+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++ +..+..+.+|++|.++++++++++.
T Consensus 5 ~~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 5 AACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3455788999999999999999999999999999999999988877766655 3458889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCC------CCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC------CCCeEEEEecCCc
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTI------EYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGG 157 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~------~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~------~~~~iv~~ss~~~ 157 (218)
+++ +++|+||||||.....++. +.+.++|++.+++|+.++++++++++|+|.++ +.++||++||..+
T Consensus 82 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 160 (265)
T 2o23_A 82 GKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA 160 (265)
T ss_dssp HHH-SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred HHC-CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh
Confidence 998 6899999999986554443 37899999999999999999999999999877 5689999999998
Q ss_pred cCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 158 LSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
..+.++...|+++|++++.+++.++.|+.+.||+||+|+||+++|++.+..
T Consensus 161 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 211 (265)
T 2o23_A 161 FEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL 211 (265)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----
T ss_pred cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc
Confidence 888889999999999999999999999999999999999999999997653
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=254.60 Aligned_cols=193 Identities=30% Similarity=0.479 Sum_probs=156.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|++|||||+||||++++++|+++|++|+++ .|+.+..+...+++...+..+..+.+|++|.++++++++++.+.+
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4678999999999999999999999999999998 677777777776666656678899999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.++..+|+++|+
T Consensus 82 -~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 160 (247)
T 2hq1_A 82 -GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKA 160 (247)
T ss_dssp -SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHH
Confidence 6899999999987666777888999999999999999999999999998877789999999988888889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+++.++.|+.+.||++|+|+||+++|++.+.
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 195 (247)
T 2hq1_A 161 GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV 195 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence 99999999999999999999999999999998754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=251.48 Aligned_cols=192 Identities=30% Similarity=0.408 Sum_probs=176.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++||||+||||++++++|+++|++|++++|+.+..+...+++... ..+..+.+|++|.++++++++++.+.+
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF- 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 567999999999999999999999999999999999988877766665432 468889999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++. ++||++||..+..+.++...|+++|+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (251)
T 1zk4_A 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG 160 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHH
Confidence 68999999999887777888999999999999999999999999999988766 79999999999999899999999999
Q ss_pred HHHHHHHHHHHHhc--cCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+++.++.|+. +.||++++|+||+++|++.+.
T Consensus 161 a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~ 197 (251)
T 1zk4_A 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD 197 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh
Confidence 99999999999998 889999999999999999764
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-39 Score=259.51 Aligned_cols=190 Identities=22% Similarity=0.262 Sum_probs=168.7
Q ss_pred ccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+..+++|++|.++++++++++.++
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678999999999 99999999999999999999999876 33344444332223678899999999999999999999
Q ss_pred cCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 92 FNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ +++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||.++..+.++...|
T Consensus 82 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y 158 (275)
T 2pd4_A 82 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM 158 (275)
T ss_dssp T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred c-CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence 8 799999999998653 56778899999999999999999999999999864 3799999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|++++++++.++.|+++.||+||+|+||+++|+|.+.
T Consensus 159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 198 (275)
T 2pd4_A 159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG 198 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhh
Confidence 9999999999999999999999999999999999998654
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=251.70 Aligned_cols=190 Identities=27% Similarity=0.374 Sum_probs=174.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh-hhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW-QSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+|+++||||+||||++++++|+++|++|++++|+.+..++..+++ ...+..+..+.+|++|.++++++++++.+++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CC
Confidence 689999999999999999999999999999999998887777666 3334568889999999999999999999998 68
Q ss_pred ccEEEecCCCCCCCC---CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 96 LNILVNNVGTNIRKP---TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 96 id~vv~~ag~~~~~~---~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+|+||||||.....+ +.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.++...|+++|+
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG 160 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence 999999999865555 67789999999999999999999999999998877789999999999998899999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+++.++.|+.+.||++++|+||+++|++.+.
T Consensus 161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 195 (250)
T 2cfc_A 161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW 195 (250)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc
Confidence 99999999999999999999999999999999765
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=254.90 Aligned_cols=184 Identities=26% Similarity=0.364 Sum_probs=164.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||++++++|+++|++|++++|+.+++++.. ++ ..+..+.+|++|.+++++++ +.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~----~~~- 72 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQFA----NEV- 72 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHHH----HHC-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHHH----HHh-
Confidence 467999999999999999999999999999999999987655433 22 25788899999999988444 445
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-CCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~-~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||.++..+.+ +...|+++|+
T Consensus 73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~ 152 (246)
T 2ag5_A 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA 152 (246)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHH
Confidence 689999999998777778889999999999999999999999999999887778999999999888877 8899999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++++++.++.|+++.||+||+|+||+++||+.+.
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 187 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQE 187 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhh
Confidence 99999999999999999999999999999999765
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=258.44 Aligned_cols=190 Identities=25% Similarity=0.276 Sum_probs=167.7
Q ss_pred cCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++||++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+..+.+|++|.++++++++++.+++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 789999999999 99999999999999999999999875 333344443322236788999999999999999999998
Q ss_pred CCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 93 NGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+++|+||||||.... .++.+.+.++|++.+++|+.|+++++++++|+|.++ .++||++||.++..+.++...|+
T Consensus 98 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~ 175 (285)
T 2p91_A 98 -GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMG 175 (285)
T ss_dssp -SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHH
T ss_pred -CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHH
Confidence 799999999998653 567788999999999999999999999999999754 48999999999999989999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++|++++++++.++.|+++.||+||+|+||+++|++.+.
T Consensus 176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 214 (285)
T 2p91_A 176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS 214 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc
Confidence 999999999999999999999999999999999998653
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=251.24 Aligned_cols=182 Identities=34% Similarity=0.501 Sum_probs=166.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+++||||++|||++++++|+++|++|++++|+.++. .+++ + +..+++|+++ ++++++++++.+.+ +++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~i 71 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGL 71 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999988762 2233 1 6778999999 99999999999988 689
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC--CCCchhhhhHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--GSGSIYGATKAAM 174 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--~~~~~Y~~sK~a~ 174 (218)
|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+. ++...|+++|+++
T Consensus 72 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~ 151 (239)
T 2ekp_A 72 HVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL 151 (239)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence 99999999887778889999999999999999999999999999988777899999999988877 8889999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++.++.|+++.||+||+|+||+++|+|.+..
T Consensus 152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 185 (239)
T 2ekp_A 152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPL 185 (239)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcc
Confidence 9999999999999999999999999999997654
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=251.72 Aligned_cols=190 Identities=23% Similarity=0.310 Sum_probs=174.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEE-ecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
||++|||||+||||++++++|+++|++|++ .+|+.+..+...+++...+..+..+.+|+++.++++++++++.+.+ ++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~ 79 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GT 79 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence 589999999999999999999999999988 5898888777766665556678899999999999999999999998 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.++||++||..+..+.++...|+++|++++
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 159 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI 159 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence 99999999987777777889999999999999999999999999998877789999999988888889999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++.++.|+.+.||++++|+||+++|++.+.
T Consensus 160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (244)
T 1edo_A 160 GFSKTAAREGASRNINVNVVCPGFIASDMTAK 191 (244)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred HHHHHHHHHhhhcCCEEEEEeeCccccchhhh
Confidence 99999999999999999999999999998764
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=250.22 Aligned_cols=193 Identities=28% Similarity=0.414 Sum_probs=175.2
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeE-EEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV-SGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..+++++|+++||||+||||++++++|+++|++|++++|+.++.+...+++. ..+ ..+.+|++|.++++++++++.
T Consensus 5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---AAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---ccceeEEEEecCCHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999888777666652 235 788999999999999999998
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC--chh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIY 167 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~--~~Y 167 (218)
+ + +++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.+.. ..|
T Consensus 82 ~-~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y 159 (254)
T 2wsb_A 82 A-V-APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY 159 (254)
T ss_dssp H-H-SCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred h-h-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence 8 7 68999999999887777888999999999999999999999999999988777899999999888877777 899
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|++++.+++.++.|+.+.||++++|+||++.|++.+..
T Consensus 160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~ 200 (254)
T 2wsb_A 160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKM 200 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcc
Confidence 99999999999999999999999999999999999998754
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=261.97 Aligned_cols=191 Identities=27% Similarity=0.351 Sum_probs=168.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCH-HHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASP-DQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~-~~~~~~~~~~~~~ 91 (218)
.+++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.... ..+..+.+|+++. ++++++++.+.++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 5679999999999999999999999999999999999999888888876543 5789999999998 9999999999999
Q ss_pred cCCcccEEEecCCCCCC------------------------------CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHh
Q 027816 92 FNGKLNILVNNVGTNIR------------------------------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL 141 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l 141 (218)
+ +++|+||||||.... .++.+.+.++|++.+++|+.|++++++.++|+|
T Consensus 89 ~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l 167 (311)
T 3o26_A 89 F-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL 167 (311)
T ss_dssp H-SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred C-CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence 8 699999999998632 244567899999999999999999999999999
Q ss_pred HhCCCCeEEEEecCCccCcC-------------------------------------------CCCchhhhhHHHHHHHH
Q 027816 142 KASGVGSIVFISSVGGLSHV-------------------------------------------GSGSIYGATKAAMNQLT 178 (218)
Q Consensus 142 ~~~~~~~iv~~ss~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~ 178 (218)
++++.++||++||.++..+. ++...|++||+++++++
T Consensus 168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~ 247 (311)
T 3o26_A 168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247 (311)
T ss_dssp TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence 88888999999998876653 35578999999999999
Q ss_pred HHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 179 RNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 179 ~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+.|++|++ +|+||+|+||+|+|+|.+.
T Consensus 248 ~~la~e~~--~i~v~~v~PG~v~T~~~~~ 274 (311)
T 3o26_A 248 RVLANKIP--KFQVNCVCPGLVKTEMNYG 274 (311)
T ss_dssp HHHHHHCT--TSEEEEECCCSBCSGGGTT
T ss_pred HHHHhhcC--CceEEEecCCceecCCcCC
Confidence 99999985 4999999999999999764
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=253.17 Aligned_cols=194 Identities=24% Similarity=0.334 Sum_probs=175.8
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++++|++|||||+||||++++++|+++|++|++++|+.+..+...+++...+ ..+..+.+|++|.++++++++++.+
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999988877777665543 5688899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC--CeEEEEecCCcc--CcCCCCch
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV--GSIVFISSVGGL--SHVGSGSI 166 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~--~~iv~~ss~~~~--~~~~~~~~ 166 (218)
.+ +++|+||||||.....++.+.+.++|++.+++|+.+++++++.+++.|++++. ++||++||..+. .+.++...
T Consensus 108 ~~-g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~ 186 (279)
T 1xg5_A 108 QH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF 186 (279)
T ss_dssp HH-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred hC-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCch
Confidence 98 68999999999887777888999999999999999999999999999988764 899999999887 56677789
Q ss_pred hhhhHHHHHHHHHHHHHHhc--cCCeEEEEeecccccChhhHH
Q 027816 167 YGATKAAMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++|++++.+++.++.|+. +.||++++|+||+++|++..+
T Consensus 187 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~ 229 (279)
T 1xg5_A 187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFK 229 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhh
Confidence 99999999999999999998 889999999999999999644
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-38 Score=249.28 Aligned_cols=187 Identities=27% Similarity=0.367 Sum_probs=164.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+|+++||||+||||++++++|+++|++|++++|+.+.++...+++. .+..+.+|++|.++++++++++.+.+ ++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 78 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF-GE 78 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence 46899999999999999999999999999999999887776655542 47788999999999999999999998 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|+++|++++
T Consensus 79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 158 (234)
T 2ehd_A 79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL 158 (234)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHH
Confidence 99999999987777778889999999999999999999999999999887899999999999998889999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.+++.++.|+.+.||++++|+||+++|++.+.
T Consensus 159 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 190 (234)
T 2ehd_A 159 GLAGAAMLDLREANVRVVNVLPGSVDTGFAGN 190 (234)
T ss_dssp HHHHHHHHHHGGGTEEEEEEECC---------
T ss_pred HHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc
Confidence 99999999999999999999999999998764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=252.58 Aligned_cols=185 Identities=19% Similarity=0.186 Sum_probs=160.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++ ...+..+.+|+++.++++++++++.+ ..|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~----~~d 74 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS----IPS 74 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS----CCS
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh----cCC
Confidence 68999999999999999999999999999999998887776655 34677889999999999999887744 349
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
+||||||....+++.+.+.++|++.+++|+.+++++++.++|+|.+++ ++||++||..+..+.++...|+++|+++++|
T Consensus 75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 153 (230)
T 3guy_A 75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL 153 (230)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence 999999988878888999999999999999999999999999998776 4999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
++.++.|+++.||+||+|+||+++|+|.+....
T Consensus 154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~ 186 (230)
T 3guy_A 154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGK 186 (230)
T ss_dssp HHHHHHHTTTSSCEEEEEEECCC----------
T ss_pred HHHHHHHHHhcCeEEEEEECCcccChHHHhcCC
Confidence 999999999999999999999999999886543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=255.52 Aligned_cols=194 Identities=28% Similarity=0.399 Sum_probs=172.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-------CeEEEEEeeCCCHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-------FVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~v~~~~~D~~~~~~~~~~~~ 86 (218)
++++|+++||||+||||++++++|+++|++|++++|+.+..++..+++...+ ..+..+.+|++|.++++++++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 4678999999999999999999999999999999999988777666554333 467889999999999999999
Q ss_pred HHHhhcCCcc-cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCC
Q 027816 87 EVGSKFNGKL-NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 87 ~~~~~~~~~i-d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~ 164 (218)
++.+++ +++ |+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||.++..+.++.
T Consensus 84 ~~~~~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 162 (264)
T 2pd6_A 84 QVQACF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ 162 (264)
T ss_dssp HHHHHH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB
T ss_pred HHHHHh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC
Confidence 999998 677 9999999987777778889999999999999999999999999998765 6899999999888888899
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
..|+++|++++.+++.++.|+.+.||++++|+||++.|++.+..
T Consensus 163 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 206 (264)
T 2pd6_A 163 TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV 206 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc
Confidence 99999999999999999999999999999999999999987653
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=251.82 Aligned_cols=193 Identities=30% Similarity=0.374 Sum_probs=176.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++||||+||||++++++|+++|++|++++|+.+..+...+++.. .+..+..+.+|++|.++++++++++.+.+
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV 83 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999998887776666543 24568889999999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++|+
T Consensus 84 -~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 162 (248)
T 2pnf_A 84 -DGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKA 162 (248)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHH
Confidence 6899999999987766777889999999999999999999999999998877789999999888888888999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+++.++.|+.+.||++++|+||+++|++.+.
T Consensus 163 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~ 197 (248)
T 2pnf_A 163 GLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV 197 (248)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh
Confidence 99999999999999999999999999999998753
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-39 Score=256.37 Aligned_cols=190 Identities=23% Similarity=0.240 Sum_probs=167.9
Q ss_pred ccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++|++|||||+ +|||++++++|+++|++|++++|+.+ .++..+++......+..+++|++|.++++++++++.++
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 5679999999999 99999999999999999999999875 33333444332223678899999999999999999999
Q ss_pred cCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 92 FNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ +++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+..+.++...|
T Consensus 84 ~-g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y 160 (261)
T 2wyu_A 84 F-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVM 160 (261)
T ss_dssp H-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred c-CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHH
Confidence 9 699999999998653 56778899999999999999999999999999864 3799999999999998999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|++++++++.++.|+++.||+||+|+||+++|++.+.
T Consensus 161 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 200 (261)
T 2wyu_A 161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS 200 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh
Confidence 9999999999999999999999999999999999998653
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=255.11 Aligned_cols=188 Identities=20% Similarity=0.182 Sum_probs=166.5
Q ss_pred ccCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCChhhH-HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++++|++||||| ++|||++++++|+++|++|++++|+.++. ++..+++ +..+..+++|++|.++++++++++.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHH
Confidence 467999999999 99999999999999999999999987653 4433322 34577889999999999999999999
Q ss_pred hcCC---cccEEEecCCCCC-----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC
Q 027816 91 KFNG---KLNILVNNVGTNI-----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG 162 (218)
Q Consensus 91 ~~~~---~id~vv~~ag~~~-----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~ 162 (218)
++ + ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.++ ++||++||..+ .+.+
T Consensus 81 ~~-g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~iss~~~-~~~~ 156 (269)
T 2h7i_A 81 AI-GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG--GSIVGMDFDPS-RAMP 156 (269)
T ss_dssp HH-CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECCCS-SCCT
T ss_pred Hh-CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC--CeEEEEcCccc-cccC
Confidence 98 6 8999999999865 4567789999999999999999999999999999653 79999999876 6777
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.+..|+++|+++++++++++.|+++.||+||+|+||+++|+|.+..
T Consensus 157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 202 (269)
T 2h7i_A 157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAI 202 (269)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhcc
Confidence 8899999999999999999999999999999999999999987654
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-38 Score=256.02 Aligned_cols=189 Identities=17% Similarity=0.225 Sum_probs=166.0
Q ss_pred cCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++|++|||||+ +|||++++++|+++|++|++++|+. ..++..+++.........+++|++|.++++++++++.+++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 678999999999 9999999999999999999999987 3333344443322234678999999999999999999998
Q ss_pred CCcccEEEecCCCCCC----CCCCC-CCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 93 NGKLNILVNNVGTNIR----KPTIE-YSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~----~~~~~-~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+++|+||||||.... .++.+ .+.++|++.+++|+.++++++++++|+|.+ .++||++||..+..+.++...|
T Consensus 86 -g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y 162 (265)
T 1qsg_A 86 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVM 162 (265)
T ss_dssp -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHH
T ss_pred -CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHH
Confidence 699999999998653 45566 889999999999999999999999999864 3799999999999998999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++|++++++++.++.|+++.||+||+|+||+++|++.+.
T Consensus 163 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 202 (265)
T 1qsg_A 163 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 202 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc
Confidence 9999999999999999999999999999999999998653
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-38 Score=252.10 Aligned_cols=196 Identities=28% Similarity=0.393 Sum_probs=174.7
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+..++++|++|||||+||||++++++|+++|++|++++|+.+..+...+++... ..+..+.+|++|.++++++++++.
T Consensus 9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~ 87 (278)
T 2bgk_A 9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTI 87 (278)
T ss_dssp --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-CceEEEECCCCCHHHHHHHHHHHH
Confidence 3455688999999999999999999999999999999999988776666655322 268889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-CCch
Q 027816 90 SKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-SGSI 166 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~-~~~~ 166 (218)
+++ +++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.+ +...
T Consensus 88 ~~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~ 166 (278)
T 2bgk_A 88 AKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHV 166 (278)
T ss_dssp HHH-SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHH
T ss_pred HHc-CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcc
Confidence 998 68999999999764 2567788999999999999999999999999999887778999999999888877 7889
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++|++++.+++.++.|+++.||++++|+||++.|++.+.
T Consensus 167 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 207 (278)
T 2bgk_A 167 YTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD 207 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhh
Confidence 99999999999999999999999999999999999998653
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=252.16 Aligned_cols=179 Identities=22% Similarity=0.221 Sum_probs=162.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEe-c--CChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTC-S--RNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
||++|||||++|||++++++|+++|++|+++ + |+.+.++...+++ .+ .|+.|.++++++++++.+++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~- 70 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHG- 70 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGS-
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHc-
Confidence 5899999999999999999999999999999 6 9988877766654 12 23336777888999999998
Q ss_pred CcccEEEecCCCCCC---CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 94 GKLNILVNNVGTNIR---KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 94 ~~id~vv~~ag~~~~---~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+++|+||||||.... .++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||.++..+.++...|+++
T Consensus 71 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as 150 (244)
T 1zmo_A 71 EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA 150 (244)
T ss_dssp SCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred CCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence 699999999998776 78889999999999999999999999999999988878999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
|+++++|+++++.|+++.||+||+|+||+++|+|.
T Consensus 151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 185 (244)
T 1zmo_A 151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTY 185 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence 99999999999999999999999999999999998
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=280.80 Aligned_cols=190 Identities=23% Similarity=0.356 Sum_probs=169.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh---------hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---------VELNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 83 (218)
++++||+++||||++|||+++|++|+++|++|++.+|+. +.+++..+++...+..+. +|++|.+++++
T Consensus 4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~ 80 (604)
T 2et6_A 4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDK 80 (604)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHH
Confidence 467899999999999999999999999999999998765 556666666665554443 57777778889
Q ss_pred HHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC
Q 027816 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~ 163 (218)
+++++.+++ |++|+||||||.....++.+.+.++|++.|++|+.|+++++|+++|+|++++.|+||++||.++..+.++
T Consensus 81 ~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~ 159 (604)
T 2et6_A 81 IVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG 159 (604)
T ss_dssp HHHHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred HHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence 999999999 7999999999988777889999999999999999999999999999998887799999999999999999
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
...|++||+|+.+|+++|+.|++++|||||+|+|| ++|+|.+.
T Consensus 160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~ 202 (604)
T 2et6_A 160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTES 202 (604)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccc
Confidence 99999999999999999999999999999999998 69998754
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-38 Score=248.13 Aligned_cols=190 Identities=26% Similarity=0.380 Sum_probs=173.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEE-EEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSG-SVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~-~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+|+++||||+||||++++++|+++|++|+++ +|+.+..+...+++...+..+.. +.+|++|.++++++++++.+.+ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-G 79 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-T
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-C
Confidence 4799999999999999999999999999998 89988877777766555555666 8999999999999999999998 6
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|+++|+++
T Consensus 80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 159 (245)
T 2ph3_A 80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL 159 (245)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence 89999999998776777888999999999999999999999999999887778999999998888888899999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+.+++.++.|+.+.||++++|+||+++|++.+.
T Consensus 160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 192 (245)
T 2ph3_A 160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTER 192 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence 999999999999999999999999999998764
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=250.83 Aligned_cols=180 Identities=24% Similarity=0.242 Sum_probs=162.4
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHh-CCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++|++|||||++|||+++|++|++ .|++|++.+|+++. ....+..+++|++|.++++++++.+. +
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~- 68 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N- 68 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T-
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h-
Confidence 4689999999999999999999999 78899999887652 11246888999999999999995553 4
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||.....++.+.+.++|++.+++|+.++++++++++|+|+++ ++||++||..+..+.++...|++||++
T Consensus 69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa 146 (244)
T 4e4y_A 69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGA 146 (244)
T ss_dssp CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHH
Confidence 689999999999888888999999999999999999999999999998765 799999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++|+++++.|++++||+||+|+||+++|||.+...
T Consensus 147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 182 (244)
T 4e4y_A 147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLI 182 (244)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHH
Confidence 999999999999999999999999999999987653
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-38 Score=250.98 Aligned_cols=195 Identities=30% Similarity=0.447 Sum_probs=171.8
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.+++++|++|||||+||||++++++|+++|++|++++|+.+......+++.. .+..+..+.+|++|.++++++++++.+
T Consensus 9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA 88 (265)
T ss_dssp EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999976665555554432 245688899999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCC------
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGS------ 163 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~------ 163 (218)
.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.+.
T Consensus 89 ~~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~ 167 (265)
T 1h5q_A 89 DL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL 167 (265)
T ss_dssp HS-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred hc-CCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccc
Confidence 98 6899999999987777778889999999999999999999999999987654 489999999887665432
Q ss_pred -CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 164 -GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 164 -~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
...|+++|++++.+++.++.|+.+.||++++|+||+++|++.+.
T Consensus 168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 212 (265)
T 1h5q_A 168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH 212 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc
Confidence 68899999999999999999999999999999999999998764
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-38 Score=250.71 Aligned_cols=193 Identities=28% Similarity=0.413 Sum_probs=175.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC-hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|++|||||+||||++++++|+++|++|++++|+ .+..+...+++...+..+..+.+|++|.++++++++++.+++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678999999999999999999999999999999998 777777777776666788999999999999999999999998
Q ss_pred CCcccEEEecCCC-CCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--C---CeEEEEecCCccC-cCCCCc
Q 027816 93 NGKLNILVNNVGT-NIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--V---GSIVFISSVGGLS-HVGSGS 165 (218)
Q Consensus 93 ~~~id~vv~~ag~-~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~---~~iv~~ss~~~~~-~~~~~~ 165 (218)
+++|+||||||. ....++.+.+.++|++.+++|+.++++++++++|.|.+++ . ++||++||..+.. +.++..
T Consensus 84 -g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 162 (258)
T 3afn_B 84 -GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG 162 (258)
T ss_dssp -SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred -CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence 689999999997 5556777889999999999999999999999999987543 2 7999999998877 778889
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.|+++|++++.+++.++.|+.+.||++++|+||+++|++.+.
T Consensus 163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~ 204 (258)
T 3afn_B 163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD 204 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence 999999999999999999999999999999999999998653
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-38 Score=252.56 Aligned_cols=193 Identities=28% Similarity=0.441 Sum_probs=172.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++++|++|||||+||||++++++|+++|++|++++|+.+..+...+.+...+..+..+.+|++|.++++++++++.+.
T Consensus 29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 108 (279)
T 3ctm_A 29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD 108 (279)
T ss_dssp GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999987766665555444567888999999999999999999999
Q ss_pred cCCcccEEEecCCCCCC-CCCC-CCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc--CCCCchh
Q 027816 92 FNGKLNILVNNVGTNIR-KPTI-EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--VGSGSIY 167 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~-~~~~-~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--~~~~~~Y 167 (218)
+ +++|+||||||.... .++. +.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+ .++...|
T Consensus 109 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y 187 (279)
T 3ctm_A 109 F-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPY 187 (279)
T ss_dssp H-SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHH
T ss_pred h-CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccH
Confidence 8 689999999998765 5666 788999999999999999999999999998877789999999998887 7888999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|++++.+++.++.|+++.| +||+|+||+++|++.+
T Consensus 188 ~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~ 225 (279)
T 3ctm_A 188 NTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD 225 (279)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred HHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence 9999999999999999999999 9999999999999864
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=249.99 Aligned_cols=192 Identities=24% Similarity=0.308 Sum_probs=172.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++||||+||||++++++|+++|++|++++|+.+.++...+++...+ ..+..+.+|++|.++++++++++.+.+
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999999999988887776665433 378899999999999999999999998
Q ss_pred CCcccEEEec-CCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNN-VGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~-ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+|||| ||... .+..+.+.++|++.+++|+.|+++++++++|.|.++ .++||++||.++..+.++...|++||
T Consensus 105 -g~iD~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 181 (286)
T 1xu9_A 105 -GGLDMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASK 181 (286)
T ss_dssp -TSCSEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHH
Confidence 689999999 56543 345567899999999999999999999999998765 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh--ccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEW--AKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~--~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++++++++++.|+ ...||++++|+||+++|++.+..
T Consensus 182 ~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~ 220 (286)
T 1xu9_A 182 FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA 220 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHh
Confidence 99999999999999 67899999999999999998654
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=252.95 Aligned_cols=195 Identities=26% Similarity=0.337 Sum_probs=174.7
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+..++++|+++||||+||||++++++|+++|++|++++|+.+..+...+++... +..+..+.+|++|.++++++++++.
T Consensus 20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 344678999999999999999999999999999999999998887777766543 5578899999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhH-hCCCCeEEEEecCCccCcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~-~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++++|. +.+.++||++||.++..+.++...|+
T Consensus 100 ~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~ 178 (302)
T 1w6u_A 100 KVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 178 (302)
T ss_dssp HHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred HHc-CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH
Confidence 998 7999999999987667777889999999999999999999999999997 44568999999999888888999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh-hhH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS-LVE 206 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~-~~~ 206 (218)
++|++++.+++.++.|+.+.||++++|+||+++|+ +.+
T Consensus 179 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~ 217 (302)
T 1w6u_A 179 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 217 (302)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhh
Confidence 99999999999999999999999999999999998 443
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-38 Score=257.37 Aligned_cols=190 Identities=25% Similarity=0.384 Sum_probs=170.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe---------cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC---------SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~---------~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 83 (218)
++++||++|||||++|||+++|++|+++|++|++. +|+.++.+...+++...+..+ .+|+++.+++++
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~ 81 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEK 81 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHH
Confidence 46789999999999999999999999999999996 456777777777776554433 489999999999
Q ss_pred HHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC
Q 027816 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~ 163 (218)
+++++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+.++
T Consensus 82 ~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~ 160 (319)
T 1gz6_A 82 LVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG 160 (319)
T ss_dssp HHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred HHHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence 999999998 6999999999987766777889999999999999999999999999998877789999999988888888
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
...|++||+++++|++.+++|+++.||+||+|+||++ |+|.+.
T Consensus 161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~ 203 (319)
T 1gz6_A 161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET 203 (319)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc
Confidence 9999999999999999999999999999999999998 887653
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=262.49 Aligned_cols=190 Identities=21% Similarity=0.249 Sum_probs=161.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH---HHHHHhh---hCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN---KCLKEWQ---SKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~---~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
++|++|||||++|||++++++|+++|++|++++|+....+ ...+... ..+..+..+.+|++|.++++++++++.
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 3789999999999999999999999998888776544332 2222221 123568889999999999999999873
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|+|++++.++||++||.++..+.++...|++
T Consensus 81 --~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a 157 (327)
T 1jtv_A 81 --E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA 157 (327)
T ss_dssp --T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred --c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence 3 6899999999987767788899999999999999999999999999998777799999999999999899999999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
||+++++|++.++.|+.++||+||+|+||+|+|+|.+..
T Consensus 158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~ 196 (327)
T 1jtv_A 158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKV 196 (327)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhh
Confidence 999999999999999999999999999999999997653
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=249.77 Aligned_cols=182 Identities=17% Similarity=0.139 Sum_probs=165.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC-
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (218)
.++|++|||||++|||++++++|+++|++|++++|+.+... .....+.+|++|.++++++++++.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 74 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGD 74 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999999876532 1356778999999999999999999884
Q ss_pred CcccEEEecCCCCCCCCC-CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPT-IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~-~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++ .+.+.++|++.+++|+.++++++++++|+|++ .++||++||.++..+.++...|+++|+
T Consensus 75 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~ 152 (241)
T 1dhr_A 75 QKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKG 152 (241)
T ss_dssp CCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred CCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHH
Confidence 489999999998776677 78889999999999999999999999999965 379999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc--cCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++++.|+. +.||+||+|+||+++|+|.+..
T Consensus 153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~ 190 (241)
T 1dhr_A 153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS 190 (241)
T ss_dssp HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccccc
Confidence 99999999999998 8999999999999999998765
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-38 Score=277.21 Aligned_cols=190 Identities=28% Similarity=0.407 Sum_probs=166.3
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||+++||||++|||+++|++|+++|++|++.++.. .++..+++...+..+..+.+|++ ++.+++++++.+++
T Consensus 318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY 393 (604)
T ss_dssp CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence 367899999999999999999999999999999988632 23444555555566777788873 55678899999998
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+
T Consensus 394 -G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa 472 (604)
T 2et6_A 394 -GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA 472 (604)
T ss_dssp -SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence 7999999999988777889999999999999999999999999999999887899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+.+|+++|+.|++++|||||+|+||. +|+|.+..
T Consensus 473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~ 507 (604)
T 2et6_A 473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSI 507 (604)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----
T ss_pred HHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccccc
Confidence 999999999999999999999999996 99997653
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=248.28 Aligned_cols=194 Identities=24% Similarity=0.380 Sum_probs=175.8
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+..++++|++|||||+||||++++++|+++|++|++++| +.+..++..+++...+..+..+.+|++|.++++++++++.
T Consensus 15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV 94 (274)
T ss_dssp -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999 7777777777776656678889999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~ 168 (218)
+++ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++++|++ + ++||++||..+. .+.++...|+
T Consensus 95 ~~~-~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~~~~~Y~ 171 (274)
T 1ja9_A 95 SHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIPNHALYA 171 (274)
T ss_dssp HHH-SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCCSCHHHH
T ss_pred HHc-CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCCCCchHH
Confidence 998 68999999999877667778899999999999999999999999999873 3 799999999888 6778889999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++|++++.+++.++.|+...||++++|+||++.|++.+.
T Consensus 172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~ 210 (274)
T 1ja9_A 172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDE 210 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhc
Confidence 999999999999999999999999999999999999874
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-38 Score=249.63 Aligned_cols=182 Identities=22% Similarity=0.236 Sum_probs=161.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|++|||||++|||++++++|+++|++|++++|+.++.+...+ +...+.++..+ |.++++++++++.+.+ +++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD 74 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD 74 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999887766544 44333334333 5677788899988888 6999
Q ss_pred EEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 98 ILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 98 ~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
+||||||.. ...++.+.+.++|++.+++|+.++++++++++|+|.+++.++||++||..+..+.++...|+++|+++++
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 154 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT 154 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence 999999987 6667788999999999999999999999999999988777999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccc---------cChhhH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYT---------KTSLVE 206 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v---------~t~~~~ 206 (218)
++++++.|+++.||+||+|+||++ +|+|.+
T Consensus 155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~ 193 (254)
T 1zmt_A 155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWK 193 (254)
T ss_dssp HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHT
T ss_pred HHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccc
Confidence 999999999999999999999999 999865
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-38 Score=247.37 Aligned_cols=182 Identities=16% Similarity=0.153 Sum_probs=164.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC-
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (218)
|++|++|||||++|||++++++|+++|++|++++|+.+... .....+.+|+++.++++++++++.+.++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 35799999999999999999999999999999999876532 1356778999999999999999999884
Q ss_pred CcccEEEecCCCCCCCCC-CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPT-IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~-~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++ .+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+..+.++...|+++|+
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~ 148 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKA 148 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHH
Confidence 489999999998776677 77889999999999999999999999999865 379999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc--cCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++++++++++.|+. +.||+||+|+||+++|+|.+..
T Consensus 149 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~ 186 (236)
T 1ooe_A 149 AVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW 186 (236)
T ss_dssp HHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhc
Confidence 99999999999998 8999999999999999998765
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=244.34 Aligned_cols=189 Identities=24% Similarity=0.281 Sum_probs=163.7
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
|++|++|||||+||||++++++|+++| ++|++++|+.+..+... ++ ....+..+.+|+++.++++++++++.+.+
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SI--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TC--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hc--cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 357899999999999999999999999 99999999988765442 22 24568889999999999999999999988
Q ss_pred CC--cccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC------C-----CCeEEEEecCCcc
Q 027816 93 NG--KLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------G-----VGSIVFISSVGGL 158 (218)
Q Consensus 93 ~~--~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~------~-----~~~iv~~ss~~~~ 158 (218)
+ ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|+|.++ + .++||++||..+.
T Consensus 78 -g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 156 (250)
T 1yo6_A 78 -GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS 156 (250)
T ss_dssp -GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred -CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence 5 8999999999876 6778889999999999999999999999999999876 4 6899999999887
Q ss_pred CcC-------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 159 SHV-------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 159 ~~~-------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
.+. ++...|+++|++++++++.++.|+.+.||++++|+||+++|+|.+.
T Consensus 157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 212 (250)
T 1yo6_A 157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK 212 (250)
T ss_dssp STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC
Confidence 765 5778999999999999999999999999999999999999999764
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-37 Score=242.92 Aligned_cols=186 Identities=31% Similarity=0.439 Sum_probs=166.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||+||||++++++|+++|++|++++|+.++.++..+++. .+..+.+|++|.++++++++ .+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~- 74 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV- 74 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC-
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc-
Confidence 5789999999999999999999999999999999999887776655442 24556899999999888876 34
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++ .++||++||..+..+.++...|+++|+
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 154 (244)
T 3d3w_A 75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKG 154 (244)
T ss_dssp CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHH
Confidence 6899999999987767778889999999999999999999999999998765 689999999999988889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++.+++.++.|+++.||++++|+||+++|++.+..
T Consensus 155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~ 190 (244)
T 3d3w_A 155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT 190 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhh
Confidence 999999999999999999999999999999987743
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=256.35 Aligned_cols=193 Identities=14% Similarity=0.057 Sum_probs=166.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHh-CCCeEEEecCChhhHH------------HHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELN------------KCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
...+|++|||||++|||+++|+.|++ +|++|++++|+.+..+ ...+.+...+..+..+.+|+++.++
T Consensus 44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~ 123 (405)
T 3zu3_A 44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI 123 (405)
T ss_dssp TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 45689999999999999999999999 9999999987654321 2233444556678899999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhh
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTN-------------IRKPT---------------------IEYSAEEYSKIMTTN 126 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n 126 (218)
++++++++.+++ |++|+||||||.. ...++ .+.+.++|++.+++|
T Consensus 124 v~~~v~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn 202 (405)
T 3zu3_A 124 KQLTIDAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM 202 (405)
T ss_dssp HHHHHHHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence 999999999999 7999999999974 23444 678999999999999
Q ss_pred hhhHH-HHHHHHhH-HhHhCCCCeEEEEecCCccCcCCCC--chhhhhHHHHHHHHHHHHHHhccC-CeEEEEeeccccc
Q 027816 127 FESTY-HLCQLVYP-LLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKD-NIRTNSVAPWYTK 201 (218)
Q Consensus 127 v~~~~-~~~~~~~~-~l~~~~~~~iv~~ss~~~~~~~~~~--~~Y~~sK~a~~~~~~~l~~e~~~~-gv~v~~v~PG~v~ 201 (218)
..+.+ .+++++.+ .|.+ +.|+||++||+.+..+.+.+ ..|+++|+++++++++|+.|+++. |||||+|+||+++
T Consensus 203 ~~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~ 281 (405)
T 3zu3_A 203 GGEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVV 281 (405)
T ss_dssp SSHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCC
T ss_pred chhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCc
Confidence 99998 77887765 4443 35899999999999988887 999999999999999999999999 9999999999999
Q ss_pred ChhhHHH
Q 027816 202 TSLVERV 208 (218)
Q Consensus 202 t~~~~~~ 208 (218)
|++...+
T Consensus 282 T~~s~~i 288 (405)
T 3zu3_A 282 SQASSAI 288 (405)
T ss_dssp CHHHHTS
T ss_pred CchhhcC
Confidence 9998754
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=265.34 Aligned_cols=192 Identities=27% Similarity=0.339 Sum_probs=167.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh--HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE--LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..+++|++|||||++|||+++|++|+++|++|++++|+... .++..+++ .+..+.+|++|.++++++++++.+
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~ 283 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTE 283 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999986532 22333222 245789999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++++++|+||||||.....++.+.+.++|++.+++|+.|++++.+++++.|.+++.++||++||.++..+.++...|+++
T Consensus 284 ~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Yaas 363 (454)
T 3u0b_A 284 HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATT 363 (454)
T ss_dssp HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHH
Confidence 98546999999999988888889999999999999999999999999999988778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++++|+++++.|+.+.||+||+|+||+++|+|.+...
T Consensus 364 Kaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 402 (454)
T 3u0b_A 364 KAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIP 402 (454)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcc
Confidence 999999999999999999999999999999999987643
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-37 Score=246.78 Aligned_cols=184 Identities=29% Similarity=0.403 Sum_probs=164.7
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++|++|||||+||||++++++|+++|++|++++|+.+..++..+++... ...+..+.+|++|.++++++++++.+++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 57899999999999999999999999999999999988877766666432 3468889999999999999999999999
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEEEEecCCccCcCCCCchhhh
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
+++|+||||||... .++|++.+++|+.+++.+++.++|+|.+++ .++||++||.++..+.++...|++
T Consensus 85 -g~id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~ 155 (267)
T 2gdz_A 85 -GRLDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA 155 (267)
T ss_dssp -SCCCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred -CCCCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence 69999999999642 346889999999999999999999997653 589999999999999899999999
Q ss_pred hHHHHHHHHHHH--HHHhccCCeEEEEeecccccChhhHH
Q 027816 170 TKAAMNQLTRNL--ACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 170 sK~a~~~~~~~l--~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+|++++++++++ +.|+.+.|||||+|+||+++|++.+.
T Consensus 156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~ 195 (267)
T 2gdz_A 156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES 195 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc
Confidence 999999999985 68999999999999999999998764
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=247.90 Aligned_cols=185 Identities=19% Similarity=0.186 Sum_probs=164.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
...+.+|++|||||++|||+++|++|+++|++|++++|+.++.. -..+.+|++|.++++++++++.++
T Consensus 17 ~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~ 84 (251)
T 3orf_A 17 RGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSK 84 (251)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHH
Confidence 34556899999999999999999999999999999999886532 134678999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCC-CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNIRKP-TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~-~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +++|+||||||.....+ +.+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+..+.++...|+++
T Consensus 85 ~-g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s 161 (251)
T 3orf_A 85 S-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGAT 161 (251)
T ss_dssp T-CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred c-CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHH
Confidence 8 69999999999876554 677889999999999999999999999999866 3799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc--cCCeEEEEeecccccChhhHHHHhc
Q 027816 171 KAAMNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERVMFS 211 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~~~~~ 211 (218)
|++++++++.++.|++ +.||+||+|+||+++|+|.+.....
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~ 204 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD 204 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc
Confidence 9999999999999987 8899999999999999999876544
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=248.52 Aligned_cols=189 Identities=34% Similarity=0.469 Sum_probs=172.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-----CCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-----KGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
.+++|+++||||+||||++++++|+++|++|++++|+.+..+...+++.. .+..+..+.+|+++.++++++++++
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999888877777654 3567899999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
.+.+ +++|+||||||.....++.+.+.++|++.+++|+.++++++++++|.+.+.+.++||++||.+ ..+.+....|+
T Consensus 95 ~~~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~ 172 (303)
T 1yxm_A 95 LDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSG 172 (303)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHH
T ss_pred HHHc-CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhH
Confidence 9998 689999999998766677788999999999999999999999999965544458999999988 77888889999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
++|++++++++.++.|+.+.||++++|+||++.|++
T Consensus 173 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 173 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 999999999999999999999999999999999995
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=242.46 Aligned_cols=165 Identities=24% Similarity=0.280 Sum_probs=152.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||+++|++|+++|++|++++|+.+ +|++|.++++++++++
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~----- 57 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI----- 57 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH-----
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh-----
Confidence 567999999999999999999999999999999999765 7999999999998876
Q ss_pred CcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|++|||||.. ...++.+.+.++|++.+++|+.++++++++++|+|++ .++||++||..+..+.++...|+++|+
T Consensus 58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~ 135 (223)
T 3uce_A 58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINA 135 (223)
T ss_dssp CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHH
Confidence 6899999999987 5678889999999999999999999999999999965 379999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++++++++++.|+++ ||||+|+||+++||+.+.
T Consensus 136 a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~ 168 (223)
T 3uce_A 136 AIEATTKVLAKELAP--IRVNAISPGLTKTEAYKG 168 (223)
T ss_dssp HHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTT
T ss_pred HHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhh
Confidence 999999999999986 999999999999998754
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=261.37 Aligned_cols=195 Identities=17% Similarity=0.111 Sum_probs=164.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHh-CCCeEEEecCChhhHH------------HHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELN------------KCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~-~G~~V~~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
...+|++|||||++|||+++|+.|++ +|++|++++|+.+..+ ...+.+...+..+..+.+|+++.++
T Consensus 58 ~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~ 137 (422)
T 3s8m_A 58 NDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAA 137 (422)
T ss_dssp SSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHH
Confidence 34589999999999999999999999 9999999988765432 1234455566778899999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhh
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTN-------------IRKPT---------------------IEYSAEEYSKIMTTN 126 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n 126 (218)
++++++.+.++++|++|+||||||.. ...++ .+.+.++|++.+++|
T Consensus 138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn 217 (422)
T 3s8m_A 138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM 217 (422)
T ss_dssp HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence 99999999999845899999999872 22344 367999999999999
Q ss_pred hhhHH-HHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC--chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 127 FESTY-HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 127 v~~~~-~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~--~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..+.+ .+++.+.+.+...+.|+||++||+++..+.+.+ ..|++||+++.+|+++|+.|+++.|||||+|+||+++|+
T Consensus 218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~ 297 (422)
T 3s8m_A 218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297 (422)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence 99987 778887654322335899999999999887766 999999999999999999999999999999999999999
Q ss_pred hhHHH
Q 027816 204 LVERV 208 (218)
Q Consensus 204 ~~~~~ 208 (218)
|....
T Consensus 298 ~~~~i 302 (422)
T 3s8m_A 298 ASAAI 302 (422)
T ss_dssp TGGGS
T ss_pred hhhcC
Confidence 98754
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-38 Score=250.49 Aligned_cols=188 Identities=25% Similarity=0.281 Sum_probs=138.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||++|||+++|++|++ |++|++++|+.+..+...+ ...+..+.+|+++.++ .+.+.+..+.+
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~- 73 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL- 73 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC-
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc-
Confidence 56799999999999999999999988 9999999999887765543 2347888999988776 44455555666
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|.|++++ ++||++||.++..+.++...|++||++
T Consensus 74 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a 152 (245)
T 3e9n_A 74 DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHA 152 (245)
T ss_dssp SCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHH
Confidence 6899999999998777888899999999999999999999999999998765 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
+++++++++.|+++.||+||+|+||+++|+|.+....
T Consensus 153 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~ 189 (245)
T 3e9n_A 153 LRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD 189 (245)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh
Confidence 9999999999999999999999999999999887643
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-37 Score=245.05 Aligned_cols=183 Identities=22% Similarity=0.274 Sum_probs=160.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChh--hHHHHHHHhhhCCCeEEEEEeeCCCH-HHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~ 89 (218)
++++|+++||||+||||++++++|+++|++ |++++|+.+ ..++..+.. .+..+..+.+|++|. ++++++++++.
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN--PKVNITFHTYDVTVPVAESKKLLKKIF 79 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC--TTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC--CCceEEEEEEecCCChHHHHHHHHHHH
Confidence 467999999999999999999999999996 999999863 222222211 145788899999998 99999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEEEEecCCccCcCCCCch
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~~~~~~~~ 166 (218)
+.+ +++|+||||||.. +.++|++.+++|+.++++++++++|+|.+++ .++||++||.++..+.++...
T Consensus 80 ~~~-g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 150 (254)
T 1sby_A 80 DQL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV 150 (254)
T ss_dssp HHH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred Hhc-CCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchH
Confidence 998 6899999999963 3456899999999999999999999997653 579999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++||++++++++.++.|+.+.||+||+|+||+++|+|.+.
T Consensus 151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~ 191 (254)
T 1sby_A 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT 191 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence 99999999999999999998889999999999999999764
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=260.10 Aligned_cols=189 Identities=20% Similarity=0.207 Sum_probs=163.4
Q ss_pred CcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChh---------hHHHHHHHhhh---CCCeEEEEEeeCCCH--H-
Q 027816 17 GMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEV---------ELNKCLKEWQS---KGFVVSGSVCDAASP--D- 79 (218)
Q Consensus 17 ~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~---------~~~~~~~~~~~---~~~~v~~~~~D~~~~--~- 79 (218)
+|++|||||++ |||+++|++|+++|++|++++|++. +.+...+.... ....+..+.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 78999999986 9999999999999999997776552 22111111111 123477888999888 7
Q ss_pred -----------------HHHHHHHHHHhhcCCcccEEEecCCCC--CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHH
Q 027816 80 -----------------QREKLIQEVGSKFNGKLNILVNNVGTN--IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140 (218)
Q Consensus 80 -----------------~~~~~~~~~~~~~~~~id~vv~~ag~~--~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~ 140 (218)
+++++++++.+++ +++|+||||||.. ...++.+.+.++|++.+++|+.|+++++++++|+
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999 6999999999974 3567888999999999999999999999999999
Q ss_pred hHhCCCCeEEEEecCCccCcCCCCc-hhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccccChhhHHH
Q 027816 141 LKASGVGSIVFISSVGGLSHVGSGS-IYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 141 l~~~~~~~iv~~ss~~~~~~~~~~~-~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+++ |+||++||.++..+.++.. .|++||+|+.+|+++|+.|+++ .||+||+|+||+|+|+|.+..
T Consensus 161 m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~ 228 (329)
T 3lt0_A 161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAI 228 (329)
T ss_dssp EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTC
T ss_pred HhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhh
Confidence 9875 8999999999999999886 9999999999999999999998 899999999999999999865
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-37 Score=243.50 Aligned_cols=181 Identities=28% Similarity=0.370 Sum_probs=158.7
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
....+++|++|||||+||||++++++|+++|++|++++|+.+..+ ++ + .+..+ +|+ .++++++++++
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~-- 79 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV-- 79 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS--
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh--
Confidence 455788999999999999999999999999999999999874332 22 2 45666 999 45666666655
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.++|+||||||.....++.+.+.++|++.+++|+.+++++++.++|+|++++.++||++||..+..+.++...|+++
T Consensus 80 ---~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 156 (249)
T 1o5i_A 80 ---KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSA 156 (249)
T ss_dssp ---CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred ---cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHH
Confidence 37999999999877777888999999999999999999999999999988777899999999999998999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|++++++++.++.|+.+.||+||+|+||+++|++.+.
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 193 (249)
T 1o5i_A 157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE 193 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc
Confidence 9999999999999999999999999999999999764
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-37 Score=245.08 Aligned_cols=197 Identities=23% Similarity=0.258 Sum_probs=168.2
Q ss_pred ccCCCccCCcEEEEecCCCchHHHHHHHHHhCC---CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHH
Q 027816 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLG---AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 9 ~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~ 85 (218)
..+...+++|++|||||+||||++++++|+++| ++|++++|+.+..+.. +++......+.++.+|+++.+++++++
T Consensus 13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 91 (267)
T 1sny_A 13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLV 91 (267)
T ss_dssp -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHH
Confidence 345567889999999999999999999999999 9999999998765533 333333456889999999999999999
Q ss_pred HHHHhhcCC-cccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC------C-----CCeEEEE
Q 027816 86 QEVGSKFNG-KLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------G-----VGSIVFI 152 (218)
Q Consensus 86 ~~~~~~~~~-~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~------~-----~~~iv~~ 152 (218)
+++.+.++. ++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|.++ + .++||++
T Consensus 92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i 171 (267)
T 1sny_A 92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM 171 (267)
T ss_dssp HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence 999998832 7999999999876 5677788999999999999999999999999999865 3 5899999
Q ss_pred ecCCccCcCC---CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 153 SSVGGLSHVG---SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 153 ss~~~~~~~~---~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
||..+..+.+ +...|+++|++++++++.++.|+.+.||++++|+||+++|+|.+
T Consensus 172 sS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 228 (267)
T 1sny_A 172 SSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG 228 (267)
T ss_dssp CCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred ecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC
Confidence 9998877653 67889999999999999999999999999999999999999874
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=252.82 Aligned_cols=185 Identities=22% Similarity=0.251 Sum_probs=159.5
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+..+++||++|||||++|||++++++|+++|++|++++|+.++.++..+++ ...+..+++|++|.++++++++++
T Consensus 10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~-- 84 (291)
T 3rd5_A 10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV-- 84 (291)
T ss_dssp GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC--
T ss_pred hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc--
Confidence 445788999999999999999999999999999999999998877766544 457899999999999999988876
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc----------
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------- 160 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---------- 160 (218)
+++|+||||||... +..+.+.++|++.+++|+.|+++++++++|+|.+ +||++||.++..+
T Consensus 85 ---~~iD~lv~nAg~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~ 155 (291)
T 3rd5_A 85 ---SGADVLINNAGIMA--VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWR 155 (291)
T ss_dssp ---CCEEEEEECCCCCS--CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCS
T ss_pred ---CCCCEEEECCcCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCccccccc
Confidence 58999999999864 3356778899999999999999999999999854 8999999887754
Q ss_pred ---CCCCchhhhhHHHHHHHHHHHHHHhccCC--eEEEEeecccccChhhHHHH
Q 027816 161 ---VGSGSIYGATKAAMNQLTRNLACEWAKDN--IRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 161 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g--v~v~~v~PG~v~t~~~~~~~ 209 (218)
.++...|++||++++++++.+++|+++.| |+||+|+||+|+|+|.+...
T Consensus 156 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~ 209 (291)
T 3rd5_A 156 SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG 209 (291)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----
T ss_pred ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc
Confidence 34557899999999999999999999888 99999999999999988753
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=239.19 Aligned_cols=185 Identities=32% Similarity=0.437 Sum_probs=165.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|++|||||+||||++++++|+++|++|++++|+.+..++..+++. .+..+.+|+++.++++++++ .+
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~- 74 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALG----GI- 74 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC-
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc----CCCcEEecCCCHHHHHHHHH----Hc-
Confidence 5789999999999999999999999999999999999887766554431 24556899999999988877 34
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|+||||||.....++.+.+.++|++.+++|+.+++++++++++.|.+++ .++||++||..+..+.++...|+++|+
T Consensus 75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 154 (244)
T 1cyd_A 75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKG 154 (244)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHH
Confidence 6899999999987767778889999999999999999999999999998765 689999999999988889999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+++.++.|+++.||++++|+||++.|++.+.
T Consensus 155 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~ 189 (244)
T 1cyd_A 155 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKK 189 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcccCccccc
Confidence 99999999999999999999999999999998764
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=269.56 Aligned_cols=192 Identities=24% Similarity=0.341 Sum_probs=156.7
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecC---------ChhhHHHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSR---------NEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
.+..+++||++|||||++|||+++|++|+++|++|++++| +.+..+...+++...+..+ .+|+++.++
T Consensus 12 ~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~ 88 (613)
T 3oml_A 12 DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVID 88 (613)
T ss_dssp ---CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGG
T ss_pred ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHH
Confidence 3566889999999999999999999999999999999987 6666777777776665544 379999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH 160 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~ 160 (218)
++++++++.+.+ +++|+||||||.....++.+.+.++|++.+++|+.|+++++++++|+|++++.++||++||.++..+
T Consensus 89 ~~~~~~~~~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~ 167 (613)
T 3oml_A 89 GAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYG 167 (613)
T ss_dssp HHHHHC-----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHC
T ss_pred HHHHHHHHHHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCC
Confidence 999999999998 7999999999998888888999999999999999999999999999999988899999999999999
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.++...|++||+|+++|+++|+.|+++.||+||+|+||.+ |+|.+
T Consensus 168 ~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~ 212 (613)
T 3oml_A 168 NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTE 212 (613)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------C
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhh
Confidence 9999999999999999999999999999999999999974 66654
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=238.85 Aligned_cols=188 Identities=27% Similarity=0.361 Sum_probs=163.9
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHh-CCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++|++|||||+||||++++++|++ +|++|++++|+.+..+...+++...+..+..+.+|+++.++++++++++.+.+
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 80 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY- 80 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence 3689999999999999999999999 99999999999888887777776656678889999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCC-HHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc------------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYS-AEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------ 160 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~-~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~------------ 160 (218)
+++|+||||||...... .+.+ .++|++.+++|+.+++++++.++++|++. ++||++||..+..+
T Consensus 81 g~id~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~~~~~~~ 157 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKF 157 (276)
T ss_dssp SSEEEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred CCCCEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCCC--CEEEEECChhhhcccccCChhHHhhc
Confidence 68999999999765433 3334 58999999999999999999999988653 69999999766532
Q ss_pred -----------------------------CCCCchhhhhHHHHHHHHHHHHHHhcc----CCeEEEEeecccccChhhH
Q 027816 161 -----------------------------VGSGSIYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 161 -----------------------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~----~gv~v~~v~PG~v~t~~~~ 206 (218)
..+...|+++|++++.+++.+++|+.+ .||+|++|+||+++|+|.+
T Consensus 158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~ 236 (276)
T 1wma_A 158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 236 (276)
T ss_dssp HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence 012389999999999999999999987 7999999999999999865
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=246.02 Aligned_cols=192 Identities=24% Similarity=0.277 Sum_probs=156.9
Q ss_pred CccCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCChh-----------hHHHHHHHhhhCCC--eEEEEEe----
Q 027816 13 WSLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEV-----------ELNKCLKEWQSKGF--VVSGSVC---- 73 (218)
Q Consensus 13 ~~~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~~~-----------~~~~~~~~~~~~~~--~v~~~~~---- 73 (218)
++++||++||||| ++|||+++|++|+++|++|++++|++. .++.. +++..... .+....+
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~ 83 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAF 83 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTC
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccccc
Confidence 4578999999999 899999999999999999999987642 11111 11111110 0122333
Q ss_pred --------eCCC--------HHHHHHHHHHHHhhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHH
Q 027816 74 --------DAAS--------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (218)
Q Consensus 74 --------D~~~--------~~~~~~~~~~~~~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~ 135 (218)
|+++ .++++++++++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.+++++++
T Consensus 84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~ 162 (315)
T 2o2s_A 84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ 162 (315)
T ss_dssp SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cccchhhhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence 3332 568899999999998 69999999999763 4677789999999999999999999999
Q ss_pred HHhHHhHhCCCCeEEEEecCCccCcCCCC-chhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccccChhhHHH
Q 027816 136 LVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 136 ~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-~~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|+|.+. ++||++||.++..+.++. ..|++||+++++|+++++.|+++ +|||||+|+||+|+|+|.+..
T Consensus 163 ~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~ 235 (315)
T 2o2s_A 163 HFGPIMNEG--GSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAI 235 (315)
T ss_dssp HHSTTEEEE--EEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHT
T ss_pred HHHHHHhcC--CEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhc
Confidence 999999653 799999999998888887 59999999999999999999985 899999999999999997653
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-36 Score=247.66 Aligned_cols=193 Identities=23% Similarity=0.258 Sum_probs=133.4
Q ss_pred CccCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCCh-----------hhHH-----------HHHHHhhhCCC--
Q 027816 13 WSLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNE-----------VELN-----------KCLKEWQSKGF-- 66 (218)
Q Consensus 13 ~~~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~~-----------~~~~-----------~~~~~~~~~~~-- 66 (218)
++++||++||||| ++|||+++|++|+++|++|++++|++ +.++ +..+++...+.
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL 84 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence 3578999999999 89999999999999999999998753 1111 11222221111
Q ss_pred -eEEEEEe------------eCCC--------HHHHHHHHHHHHhhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHH
Q 027816 67 -VVSGSVC------------DAAS--------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIM 123 (218)
Q Consensus 67 -~v~~~~~------------D~~~--------~~~~~~~~~~~~~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~ 123 (218)
....+.+ |+++ .++++++++++.+++ +++|+||||||... ..++.+.+.++|++.+
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 163 (319)
T 2ptg_A 85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAAV 163 (319)
T ss_dssp CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence 0122333 3333 457899999999998 69999999999753 4677889999999999
Q ss_pred HhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC-chhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeeccccc
Q 027816 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTK 201 (218)
Q Consensus 124 ~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-~~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~ 201 (218)
++|+.++++++++++|+|.+. ++||++||.++..+.++. ..|+++|+++++|+++|+.|+++ +|||||+|+||+|+
T Consensus 164 ~vN~~g~~~l~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~ 241 (319)
T 2ptg_A 164 SSSSYSFVSLLQHFLPLMKEG--GSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK 241 (319)
T ss_dssp HHHTHHHHHHHHHHGGGEEEE--EEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hHhhHHHHHHHHHHHHHHhcC--ceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence 999999999999999999653 799999999998888887 69999999999999999999985 89999999999999
Q ss_pred ChhhHHH
Q 027816 202 TSLVERV 208 (218)
Q Consensus 202 t~~~~~~ 208 (218)
|+|.+..
T Consensus 242 T~~~~~~ 248 (319)
T 2ptg_A 242 SRAASAI 248 (319)
T ss_dssp -------
T ss_pred Chhhhhc
Confidence 9997654
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-35 Score=247.45 Aligned_cols=193 Identities=17% Similarity=0.122 Sum_probs=164.7
Q ss_pred cCCcEEEEecCCCchHHH--HHHHHHhCCCeEEEecCChhh------------HHHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 15 LKGMTALVTGGTRGIGQA--TVEELAGLGAVVHTCSRNEVE------------LNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~--la~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
..||++|||||++|||++ +++.|+++|++|++++|+.+. .+...+.+...+..+..+++|+++.++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 578999999999999999 999999999999999886543 233333344556678899999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCC-------------CCCCC---------------------CCCCHHHHHHHHHhh
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTN-------------IRKPT---------------------IEYSAEEYSKIMTTN 126 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n 126 (218)
++++++++.+++ |++|++|||||.. ...++ .+.+.++|++.+++|
T Consensus 138 v~~~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn 216 (418)
T 4eue_A 138 KDKVIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence 999999999999 7999999999974 22333 357999999999999
Q ss_pred hhhHH-HHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC--chhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccccC
Q 027816 127 FESTY-HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKT 202 (218)
Q Consensus 127 v~~~~-~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~--~~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~t 202 (218)
..+.+ .+++.+.+.+...+.++||++||+++..+.+.+ ..|+++|+|+++++++|+.|+++ .|||||+|+||+|+|
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T 296 (418)
T 4eue_A 217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT 296 (418)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence 99888 777777654433445899999999999998888 99999999999999999999999 999999999999999
Q ss_pred hhhHHH
Q 027816 203 SLVERV 208 (218)
Q Consensus 203 ~~~~~~ 208 (218)
++.+.+
T Consensus 297 ~~s~~i 302 (418)
T 4eue_A 297 KASAYI 302 (418)
T ss_dssp HHHHTS
T ss_pred hhhhcC
Confidence 998755
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-35 Score=238.94 Aligned_cols=190 Identities=21% Similarity=0.246 Sum_probs=154.7
Q ss_pred CccCCcEEEEecCC--CchHHHHHHHHHhCCCeEEEecCChhhH-----------HHHHHHhhhCC--CeEEEEEee---
Q 027816 13 WSLKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVEL-----------NKCLKEWQSKG--FVVSGSVCD--- 74 (218)
Q Consensus 13 ~~~~~k~vlItGa~--~giG~~la~~l~~~G~~V~~~~r~~~~~-----------~~~~~~~~~~~--~~v~~~~~D--- 74 (218)
++++||++|||||+ +|||+++|++|+++|++|++++|+.... ++. +++.... .......+|
T Consensus 4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T 1d7o_A 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence 35789999999999 9999999999999999999998753211 111 1111100 112233333
Q ss_pred -----CC----C--------HHHHHHHHHHHHhhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHH
Q 027816 75 -----AA----S--------PDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQ 135 (218)
Q Consensus 75 -----~~----~--------~~~~~~~~~~~~~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~ 135 (218)
++ | .++++++++++.+++ +++|+||||||... ..++.+.+.++|++.+++|+.+++++++
T Consensus 83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~ 161 (297)
T 1d7o_A 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cchhhhhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence 32 2 568899999999998 69999999999753 4567789999999999999999999999
Q ss_pred HHhHHhHhCCCCeEEEEecCCccCcCCCC-chhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccccChhhH
Q 027816 136 LVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 136 ~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-~~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~t~~~~ 206 (218)
+++|+|++. ++||++||.++..+.++. ..|+++|+++++|+++++.|+++ +||+||+|+||+++|||.+
T Consensus 162 ~~~~~m~~~--g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~ 232 (297)
T 1d7o_A 162 HFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK 232 (297)
T ss_dssp HHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred HHHHHhccC--ceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhh
Confidence 999999653 799999999998888887 69999999999999999999985 8999999999999999854
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-35 Score=230.69 Aligned_cols=177 Identities=23% Similarity=0.248 Sum_probs=158.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|++|||||+||||++++++|+++|++|++++|+.+ . ..+..+++|++|.++++++++++ +++ +++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~ 67 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-APL 67 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CCc
Confidence 689999999999999999999999999999999875 1 12477899999999999999999 777 689
Q ss_pred cEEEecCCCCCCCCCCCC----CHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---C---CeEEEEecCCccCcCCCCch
Q 027816 97 NILVNNVGTNIRKPTIEY----SAEEYSKIMTTNFESTYHLCQLVYPLLKASG---V---GSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~----~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~---~~iv~~ss~~~~~~~~~~~~ 166 (218)
|++|||||.....++.+. +.++|++.+++|+.+++++++++++.|.+++ . ++||++||..+..+.++...
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 147 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 147 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence 999999998765555543 4559999999999999999999999998764 3 39999999998888889999
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++|++++.+++.++.|+.+.||++++|+||+++|++.+.
T Consensus 148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 188 (242)
T 1uay_A 148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG 188 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc
Confidence 99999999999999999999999999999999999999764
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=243.00 Aligned_cols=184 Identities=22% Similarity=0.213 Sum_probs=163.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCe-EEEe-cCCh-------------hhHHHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTC-SRNE-------------VELNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~-~r~~-------------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
.+|++|||||+||||.++|++|+++|++ |+++ +|+. +..++..+++...+..+.++.||++|.++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 5789999999999999999999999986 7777 8883 44566677777777889999999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccC
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS 159 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~ 159 (218)
++++++++. ++ +++|+||||||....+++.+.+.++|++.+++|+.|++++.+.+.+.+++++ .++||++||+++..
T Consensus 330 v~~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 330 AARLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407 (525)
T ss_dssp HHHHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred HHHHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence 999999998 66 7999999999998888899999999999999999999999999999987765 68999999999999
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+.++...|+++|+++++| +.++...|+++++|+||+++|+|.
T Consensus 408 g~~g~~~YaaaKa~l~~l----A~~~~~~gi~v~sI~pG~~~tgm~ 449 (525)
T 3qp9_A 408 GGAGQGAYAAGTAFLDAL----AGQHRADGPTVTSVAWSPWEGSRV 449 (525)
T ss_dssp CCTTCHHHHHHHHHHHHH----HTSCCSSCCEEEEEEECCBTTSGG
T ss_pred CCCCCHHHHHHHHHHHHH----HHHHHhCCCCEEEEECCccccccc
Confidence 999999999999999987 456677899999999999999998
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=214.85 Aligned_cols=164 Identities=22% Similarity=0.297 Sum_probs=149.9
Q ss_pred Cc-EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GM-TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k-~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+| +++||||+|+||++++++|+ +|++|++++|+.+ .+.+|+++.++++++++++ ++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~ 58 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GK 58 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CC
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CC
Confidence 44 79999999999999999999 9999999999864 3579999999999998875 68
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|+||||||.....++.+.+.++|++.+++|+.+++++++++.+.|++. ++||++||..+..+.++...|+++|++++
T Consensus 59 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~ 136 (202)
T 3d7l_A 59 VDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVT 136 (202)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE--EEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC--CEEEEEcchhhcCCCCccHHHHHHHHHHH
Confidence 9999999998766777788999999999999999999999999988543 79999999999888899999999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
.+++.++.|+ +.||++++|+||++.|++.+
T Consensus 137 ~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~ 166 (202)
T 3d7l_A 137 AFAKSAAIEM-PRGIRINTVSPNVLEESWDK 166 (202)
T ss_dssp HHHHHHTTSC-STTCEEEEEEECCBGGGHHH
T ss_pred HHHHHHHHHc-cCCeEEEEEecCccCCchhh
Confidence 9999999999 78999999999999999865
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-34 Score=229.14 Aligned_cols=167 Identities=22% Similarity=0.310 Sum_probs=137.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|++|||||+||||++++++|+++|++|++++|+.++.+. . +.+|+++.++++++++++ .+++|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~----~~~id 64 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC----SKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC----TTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh----CCCCC
Confidence 689999999999999999999999999999998764321 1 568999999988887744 26899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-------------------
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL------------------- 158 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~------------------- 158 (218)
+||||||..... +.|++.+++|+.++++++++++|+|.+++.++||++||.++.
T Consensus 65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~ 137 (257)
T 1fjh_A 65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence 999999975311 128999999999999999999999998877999999999887
Q ss_pred ---------CcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 159 ---------SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 159 ---------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.+.++...|++||++++.+++.++.|++++||+||+|+||+++|++.+..
T Consensus 138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 196 (257)
T 1fjh_A 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG 196 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------
T ss_pred hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh
Confidence 34446789999999999999999999999999999999999999998764
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-33 Score=215.33 Aligned_cols=173 Identities=21% Similarity=0.233 Sum_probs=153.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+||||++++++|+++ +|++++|+.+..+...+++.. ..+.+|++|.+++++++++ + +++|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~-~~id 68 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----A-GPLD 68 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence 68999999999999999999999 999999998887776665532 6788999999999999887 4 6899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
+||||||.....++.+.+.++|++.+++|+.+++++++++ .+++.++||++||..+..+.++...|+++|++++.+
T Consensus 69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 144 (207)
T 2yut_A 69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY 144 (207)
T ss_dssp EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence 9999999887777888899999999999999999999988 334457999999999888888999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++.++.|+.+.||++++|+||++.|++..
T Consensus 145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~ 173 (207)
T 2yut_A 145 LEAARKELLREGVHLVLVRLPAVATGLWA 173 (207)
T ss_dssp HHHHHHHHHTTTCEEEEECCCCBCSGGGG
T ss_pred HHHHHHHHhhhCCEEEEEecCcccCCCcc
Confidence 99999999999999999999999999854
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-32 Score=257.87 Aligned_cols=191 Identities=20% Similarity=0.224 Sum_probs=165.8
Q ss_pred CCccCCcEEEEecCCCc-hHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhh----hCCCeEEEEEeeCCCHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRG-IGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQ----SKGFVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~g-iG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~----~~~~~v~~~~~D~~~~~~~~~~~ 85 (218)
.++++||++|||||++| ||+++|++|+++|++|+++ +|+.+..+...+++. ..+..+.++.+|++|.+++++++
T Consensus 670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv 749 (1887)
T 2uv8_A 670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 749 (1887)
T ss_dssp CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence 44688999999999998 9999999999999999998 687777766555542 23567899999999999999999
Q ss_pred HHHHhh-----cCC-cccEEEecCCCCCCC-CCCCCC--HHHHHHHHHhhhhhHHHHHHHH--hHHhHhCCCCeEEEEec
Q 027816 86 QEVGSK-----FNG-KLNILVNNVGTNIRK-PTIEYS--AEEYSKIMTTNFESTYHLCQLV--YPLLKASGVGSIVFISS 154 (218)
Q Consensus 86 ~~~~~~-----~~~-~id~vv~~ag~~~~~-~~~~~~--~~~~~~~~~~nv~~~~~~~~~~--~~~l~~~~~~~iv~~ss 154 (218)
+.+.++ + | ++|+||||||+...+ ++.+.+ .++|++.|++|+.+++.+++.+ +|.|.+++.++||++||
T Consensus 750 ~~i~~~~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS 828 (1887)
T 2uv8_A 750 EFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP 828 (1887)
T ss_dssp HHHHSCTTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECS
T ss_pred HHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcC
Confidence 999988 5 5 899999999987766 788888 8999999999999999999988 78887766689999999
Q ss_pred CCccCcCCCCchhhhhHHHHHHH-HHHHHHHhccCCeEEEEeeccccc-ChhhH
Q 027816 155 VGGLSHVGSGSIYGATKAAMNQL-TRNLACEWAKDNIRTNSVAPWYTK-TSLVE 206 (218)
Q Consensus 155 ~~~~~~~~~~~~Y~~sK~a~~~~-~~~l~~e~~~~gv~v~~v~PG~v~-t~~~~ 206 (218)
.++..+ +...|++||+++++| ++.++.|+++. |+||+|+||+++ |+|.+
T Consensus 829 ~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~ 879 (1887)
T 2uv8_A 829 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS 879 (1887)
T ss_dssp CTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC----
T ss_pred hHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccc
Confidence 988877 678999999999999 99999999888 999999999999 88865
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-32 Score=254.43 Aligned_cols=192 Identities=20% Similarity=0.225 Sum_probs=168.2
Q ss_pred CCCccCCcEEEEecCCCc-hHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhh----CCCeEEEEEeeCCCHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRG-IGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQS----KGFVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~g-iG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~----~~~~v~~~~~D~~~~~~~~~~ 84 (218)
..++++||++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.. .+..+..+++|++|.++++++
T Consensus 470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL 549 (1688)
T 2pff_A 470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL 549 (1688)
T ss_dssp SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence 345688999999999998 9999999999999999988 6777666655555532 256789999999999999999
Q ss_pred HHHHHhh-----cCC-cccEEEecCCCCCCC-CCCCCC--HHHHHHHHHhhhhhHHHHHHHH--hHHhHhCCCCeEEEEe
Q 027816 85 IQEVGSK-----FNG-KLNILVNNVGTNIRK-PTIEYS--AEEYSKIMTTNFESTYHLCQLV--YPLLKASGVGSIVFIS 153 (218)
Q Consensus 85 ~~~~~~~-----~~~-~id~vv~~ag~~~~~-~~~~~~--~~~~~~~~~~nv~~~~~~~~~~--~~~l~~~~~~~iv~~s 153 (218)
++++.+. + | ++|+||||||....+ ++.+.+ .++|++.+++|+.+++.+++.+ +|.|.+++.++||++|
T Consensus 550 Ve~I~e~~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS 628 (1688)
T 2pff_A 550 IEFIYDTEKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS 628 (1688)
T ss_dssp HHHHHSCTTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred HHHHHHhcccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence 9999988 6 5 899999999987766 788888 9999999999999999999998 7888777668999999
Q ss_pred cCCccCcCCCCchhhhhHHHHHHH-HHHHHHHhccCCeEEEEeeccccc-ChhhH
Q 027816 154 SVGGLSHVGSGSIYGATKAAMNQL-TRNLACEWAKDNIRTNSVAPWYTK-TSLVE 206 (218)
Q Consensus 154 s~~~~~~~~~~~~Y~~sK~a~~~~-~~~l~~e~~~~gv~v~~v~PG~v~-t~~~~ 206 (218)
|.++..+ +...|++||+++++| ++.++.|+++. |+||+|+||+++ |+|.+
T Consensus 629 SiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~ 680 (1688)
T 2pff_A 629 PNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS 680 (1688)
T ss_dssp SCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSC
T ss_pred ChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccC
Confidence 9988876 678999999999999 88889998877 999999999999 78864
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=251.95 Aligned_cols=191 Identities=19% Similarity=0.218 Sum_probs=164.5
Q ss_pred CccCCcEEEEecCCCc-hHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHh----hhCCCeEEEEEeeCCCHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGTRG-IGQATVEELAGLGAVVHTC-SRNEVELNKCLKEW----QSKGFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 13 ~~~~~k~vlItGa~~g-iG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~----~~~~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
++++||++|||||++| ||+++|++|+++|++|+++ .|+.+......+++ ...+..+..+.+|++|.++++++++
T Consensus 648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~ 727 (1878)
T 2uv9_A 648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN 727 (1878)
T ss_dssp BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence 4678999999999999 9999999999999999998 47666665544433 3335688999999999999999999
Q ss_pred HHHhh---cCC-cccEEEecCCCCCCC-CCCCCC--HHHHHHHHHhhhhhHHHHHHH--HhHHhHhCCCCeEEEEecCCc
Q 027816 87 EVGSK---FNG-KLNILVNNVGTNIRK-PTIEYS--AEEYSKIMTTNFESTYHLCQL--VYPLLKASGVGSIVFISSVGG 157 (218)
Q Consensus 87 ~~~~~---~~~-~id~vv~~ag~~~~~-~~~~~~--~~~~~~~~~~nv~~~~~~~~~--~~~~l~~~~~~~iv~~ss~~~ 157 (218)
++.++ + | ++|+||||||+...+ ++.+.+ .++|++.|++|+.+++++++. +++.|.+++.++||++||.++
T Consensus 728 ~i~~~~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag 806 (1878)
T 2uv9_A 728 YIYDTKNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG 806 (1878)
T ss_dssp HHHCSSSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred HHHHhhccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence 99988 7 6 899999999987766 788888 899999999999999999987 678887666689999999988
Q ss_pred cCcCCCCchhhhhHHHHHHHHHHHHH-HhccCCeEEEEeeccccc-ChhhHH
Q 027816 158 LSHVGSGSIYGATKAAMNQLTRNLAC-EWAKDNIRTNSVAPWYTK-TSLVER 207 (218)
Q Consensus 158 ~~~~~~~~~Y~~sK~a~~~~~~~l~~-e~~~~gv~v~~v~PG~v~-t~~~~~ 207 (218)
..+ +...|+++|+++++|++.++. |+++. |+||+|+||+++ |+|...
T Consensus 807 ~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~ 855 (1878)
T 2uv9_A 807 TFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA 855 (1878)
T ss_dssp SSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH
T ss_pred ccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc
Confidence 877 478999999999999886655 47766 999999999999 998653
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=224.35 Aligned_cols=179 Identities=23% Similarity=0.275 Sum_probs=157.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh---hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+|++|||||+||||+++|++|+++|+ +|++++|+. +..++..+++...+..+.++.||++|.++++++++++.+.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~- 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED- 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence 58999999999999999999999998 899999864 3456677777777889999999999999999999998766
Q ss_pred CCcccEEEecCCCC-CCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~-~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+||||||.. ...++.+.+.++|++.+++|+.|.+++.+.+.+ ...++||++||.++..+.++...|+++|
T Consensus 318 -g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~----~~~~~iV~~SS~a~~~g~~g~~~YaAaK 392 (496)
T 3mje_A 318 -APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD----LDLDAFVLFSSGAAVWGSGGQPGYAAAN 392 (496)
T ss_dssp -SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred -CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeChHhcCCCCCcHHHHHHH
Confidence 4899999999997 677889999999999999999999999998754 3568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+++++|++.++ ..|+++++|+||++.++.+
T Consensus 393 a~ldala~~~~----~~Gi~v~sV~pG~w~~~gm 422 (496)
T 3mje_A 393 AYLDALAEHRR----SLGLTASSVAWGTWGEVGM 422 (496)
T ss_dssp HHHHHHHHHHH----HTTCCCEEEEECEESSSCC
T ss_pred HHHHHHHHHHH----hcCCeEEEEECCcccCCcc
Confidence 99999887554 4699999999998866543
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.6e-31 Score=237.66 Aligned_cols=180 Identities=22% Similarity=0.277 Sum_probs=162.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHH-hCCC-eEEEecCC---hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 16 KGMTALVTGGTRGIGQATVEELA-GLGA-VVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~-~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.+|++|||||++|||+++|++|+ ++|+ +|++++|+ .+..++..+++...+..+..++||++|.++++++++++.+
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 57899999999999999999999 7999 69999998 4456777888877888999999999999999999999877
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+ ++|+||||||.....++.+.+.++|++.+++|+.|++++.+++.|.| +||++||.++..+.++...|+++
T Consensus 609 ~~--~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAa 680 (795)
T 3slk_A 609 EH--PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAA 680 (795)
T ss_dssp TS--CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHH
T ss_pred hC--CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHH
Confidence 64 89999999999888888999999999999999999999999997766 79999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+ |+++|++++.+.||++|+|+||++.|+++..
T Consensus 681 ka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~ 713 (795)
T 3slk_A 681 NS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMAS 713 (795)
T ss_dssp HH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHH
T ss_pred HH----HHHHHHHHHHHcCCeEEEEECCeECcchhhc
Confidence 95 6666677777789999999999999985543
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-30 Score=206.03 Aligned_cols=167 Identities=22% Similarity=0.289 Sum_probs=144.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|++|||||+||||++++++|+++|++|++++|+.+..+. .+.+|+++.++++++++++ .+++|
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~----~~~~d 64 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC----GGVLD 64 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH----TTCCS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc----CCCcc
Confidence 589999999999999999999999999999998754211 1568999999998888865 25799
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC----------------
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---------------- 161 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---------------- 161 (218)
+||||||.... .++|++.+++|+.+++++++++++.|.+.+.++||++||..+..+.
T Consensus 65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
T 2dkn_A 65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA 137 (255)
T ss_dssp EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence 99999997431 1237889999999999999999999988777899999998877654
Q ss_pred ----------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 162 ----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 162 ----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++...|+++|++++.+++.+++++.+.|+++++|+||++.|++.+..
T Consensus 138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~ 194 (255)
T 2dkn_A 138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS 194 (255)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH
T ss_pred hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc
Confidence 46678999999999999999999998999999999999999998765
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.6e-29 Score=214.08 Aligned_cols=181 Identities=20% Similarity=0.191 Sum_probs=155.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChh---hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++|||||+||||++++++|+++|+ +|++++|+.+ ..++..+++...+..+.++.+|++|.++++++++++ +.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~ 303 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD 303 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence 468999999999999999999999999 5999999875 345666667666778999999999999999999988 45
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||....+++.+.+.+++++.+++|+.|++++.+.+. ..+.++||++||.++..+.++...|+++|
T Consensus 304 ~-g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~----~~~~~~~V~~SS~a~~~g~~g~~~Yaaak 378 (486)
T 2fr1_A 304 D-VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAFGAPGLGGYAPGN 378 (486)
T ss_dssp T-SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred c-CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhC----cCCCCEEEEEcChHhcCCCCCCHHHHHHH
Confidence 5 689999999999877788889999999999999999999999874 34568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccCh-hhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS-LVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~-~~~ 206 (218)
++++.|++.++ ..|+++++|+||++.++ |..
T Consensus 379 a~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~ 410 (486)
T 2fr1_A 379 AYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAE 410 (486)
T ss_dssp HHHHHHHHHHH----HTTCCCEEEEECCBC------
T ss_pred HHHHHHHHHHH----hcCCeEEEEECCeeCCCcccc
Confidence 99999876554 46999999999999886 544
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-28 Score=210.01 Aligned_cols=178 Identities=24% Similarity=0.254 Sum_probs=155.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChh---hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+|++|||||+||||++++++|+++|+ +|++++|+.. ..++..+++...+.++.++.||++|.+++++++++
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---- 333 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---- 333 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence 468999999999999999999999999 6999999864 35566667766677899999999999999998876
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++|+||||||......+.+.+.+++++.+++|+.|.+++.+.+.+. .+.++||++||.++..+.++...|+++|
T Consensus 334 --~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaK 408 (511)
T 2z5l_A 334 --YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAAN 408 (511)
T ss_dssp --SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHH
T ss_pred --CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHH
Confidence 47999999999987778888999999999999999999999877432 1457999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccc-cChhhH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYT-KTSLVE 206 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v-~t~~~~ 206 (218)
++++.|++.++ ..|+++++|+||++ +|+|..
T Consensus 409 a~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~ 440 (511)
T 2z5l_A 409 AALDALAERRR----AAGLPATSVAWGLWGGGGMAA 440 (511)
T ss_dssp HHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCC
T ss_pred HHHHHHHHHHH----HcCCcEEEEECCcccCCcccc
Confidence 99999988654 46999999999999 888764
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.5e-28 Score=237.73 Aligned_cols=189 Identities=21% Similarity=0.252 Sum_probs=151.6
Q ss_pred ccCCcEEEEecCCCc-hHHHHHHHHHhCCCeEEEecCChhh-----HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 14 ~~~~k~vlItGa~~g-iG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
.++||++|||||++| ||+++|+.|+++|++|++++|+.+. +++..+++...+..+..+++|+++.+++++++++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 478999999999999 9999999999999999999998776 5666666666677889999999999999999999
Q ss_pred HHh----hcCCcccEEEecCCC----CCC-CCCCCCCHHHH----HHHHHhhhhhHHHHHHHHhHHhHhCCCC---eE-E
Q 027816 88 VGS----KFNGKLNILVNNVGT----NIR-KPTIEYSAEEY----SKIMTTNFESTYHLCQLVYPLLKASGVG---SI-V 150 (218)
Q Consensus 88 ~~~----~~~~~id~vv~~ag~----~~~-~~~~~~~~~~~----~~~~~~nv~~~~~~~~~~~~~l~~~~~~---~i-v 150 (218)
+.+ .+ |++|++|||||. ... ....+.+.++| +..+++|+.+.+.+++.+.+.|...+.+ .+ +
T Consensus 2213 i~~~~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D 2213 VGTEQTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp HTSCCEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HHhhhhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence 998 88 799999999997 211 12223333334 4559999999999999999999876532 22 2
Q ss_pred EEecCCccCcCCCCchhhhhHHHHHHHHHHHHHH--hccCCeEEEEeeccccc-ChhhH
Q 027816 151 FISSVGGLSHVGSGSIYGATKAAMNQLTRNLACE--WAKDNIRTNSVAPWYTK-TSLVE 206 (218)
Q Consensus 151 ~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e--~~~~gv~v~~v~PG~v~-t~~~~ 206 (218)
..++..+ ..++...|++||+|+.+|+++|+.| +++ +|+||+|+||+|+ |++..
T Consensus 2292 ~~ss~~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~ 2347 (3089)
T 3zen_D 2292 PGSPNRG--MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMG 2347 (3089)
T ss_dssp EECSSTT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTT
T ss_pred ECCcccc--cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccc
Confidence 2333222 2335578999999999999999999 764 6999999999999 77653
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=191.22 Aligned_cols=157 Identities=20% Similarity=0.258 Sum_probs=130.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++|+||||||+|+||++++++|+++|++|++++|+..+.. ...+..+.+|++|.++++++++ .
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~--------~ 64 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA--------G 64 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT--------T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc--------C
Confidence 4689999999999999999999999999999999875432 3458889999999999888776 4
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc------------CcCCC
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL------------SHVGS 163 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~------------~~~~~ 163 (218)
+|+||||||.. +.++|++.+++|+.+++++++++ ++.+.++||++||..++ .+.++
T Consensus 65 ~D~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~ 132 (267)
T 3rft_A 65 CDGIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARP 132 (267)
T ss_dssp CSEEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCC
T ss_pred CCEEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCC
Confidence 79999999973 22347889999999999999998 44556899999998766 33456
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
...|+.||.+++.+++.++.++ |+++++|+||.+.+++
T Consensus 133 ~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~ 170 (267)
T 3rft_A 133 DGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEP 170 (267)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSC
T ss_pred CChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCC
Confidence 6889999999999999999885 6777777777665543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.9e-26 Score=179.75 Aligned_cols=160 Identities=16% Similarity=0.192 Sum_probs=127.1
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeE-EEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV-SGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v-~~~~~D~~~~~~~~~~~~~~~ 89 (218)
....++||+|+||||+|+||++++++|+++|++|++++|+.+..+.... . .+ ..+.+|++ +.+.
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~--~~~~~~~~Dl~---------~~~~ 79 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R--GASDIVVANLE---------EDFS 79 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T--TCSEEEECCTT---------SCCG
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C--CCceEEEcccH---------HHHH
Confidence 4467889999999999999999999999999999999999887665432 1 36 77899998 2333
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC---CCCch
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV---GSGSI 166 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---~~~~~ 166 (218)
+.+ +.+|+|||+||.... +++++.+++|+.++.++++++ ++.+.++||++||..+..+. +....
T Consensus 80 ~~~-~~~D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~ 146 (236)
T 3e8x_A 80 HAF-ASIDAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPMNMRH 146 (236)
T ss_dssp GGG-TTCSEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCGGGHH
T ss_pred HHH-cCCCEEEECCCCCCC--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChhhhhh
Confidence 444 478999999996431 357889999999999999988 34456799999997766654 46789
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
|+.+|.+++.+++ ..|++++.|+||++.+++.
T Consensus 147 Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~ 178 (236)
T 3e8x_A 147 YLVAKRLADDELK-------RSSLDYTIVRPGPLSNEES 178 (236)
T ss_dssp HHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCC
T ss_pred HHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCC
Confidence 9999999999876 4689999999999999864
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-25 Score=182.88 Aligned_cols=171 Identities=16% Similarity=0.152 Sum_probs=141.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhC-CC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGL-GA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..+++|+||||||+|+||++++++|+++ |+ +|++++|++.+.....+.+.. ..+..+.+|++|.+++.++++
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~l~~~~~---- 90 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFND--PRMRFFIGDVRDLERLNYALE---- 90 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCC--TTEEEEECCTTCHHHHHHHTT----
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcC--CCEEEEECCCCCHHHHHHHHh----
Confidence 3467899999999999999999999999 97 999999998877666555532 457888999999998877664
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
.+|+|||+||.... .....++.+.+++|+.++.++++++.+ .+.++||++||..+..+ ..+|+++
T Consensus 91 ----~~D~Vih~Aa~~~~----~~~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~~Y~~s 155 (344)
T 2gn4_A 91 ----GVDICIHAAALKHV----PIAEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---INLYGAT 155 (344)
T ss_dssp ----TCSEEEECCCCCCH----HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CSHHHHH
T ss_pred ----cCCEEEECCCCCCC----CchhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---ccHHHHH
Confidence 47999999996421 112234578999999999999999854 35679999999765543 5799999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
|.+.+.+++.+++++.+.|+++++|+||.+.++.
T Consensus 156 K~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~ 189 (344)
T 2gn4_A 156 KLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR 189 (344)
T ss_dssp HHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence 9999999999999888889999999999998853
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=179.77 Aligned_cols=178 Identities=17% Similarity=0.051 Sum_probs=137.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH-HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
|++|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+. ....+..+.+|++|.+++.++++.+
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~----- 74 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV----- 74 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----
Confidence 35789999999999999999999999999999999876432 1222221 1235788899999999999888765
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-----------CcCC
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-----------SHVG 162 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-----------~~~~ 162 (218)
++|+|||+||... .+.+.+++.+.+++|+.++.++++++... ...++||++||.+.+ .+..
T Consensus 75 -~~d~vih~A~~~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~ 146 (345)
T 2z1m_A 75 -QPDEVYNLAAQSF----VGVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFY 146 (345)
T ss_dssp -CCSEEEECCCCCC----HHHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred -CCCEEEECCCCcc----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence 5899999999642 11223457889999999999999998642 113799999997533 2344
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhc---cCCeEEEEeecccccChhhH
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWA---KDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~---~~gv~v~~v~PG~v~t~~~~ 206 (218)
+..+|+.+|.+.+.+++.++.++. ..+++++.+.||...|++.+
T Consensus 147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~ 193 (345)
T 2z1m_A 147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTR 193 (345)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhH
Confidence 567899999999999999999975 33567788999999887644
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=180.64 Aligned_cols=176 Identities=18% Similarity=0.137 Sum_probs=140.5
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+++|+||||||+|+||++++++|+++|++|++++|+.+......+.+. ....+..+.+|+++.+++.++++.+
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------ 79 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------ 79 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc------
Confidence 567899999999999999999999999999999998765433333322 2345778899999999998888765
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC------------cCC
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------HVG 162 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------~~~ 162 (218)
++|+|||+||.. ..+.+.+++.+.+++|+.++.++++++.+. .+.++||++||...+. +..
T Consensus 80 ~~d~vih~A~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~ 152 (357)
T 1rkx_A 80 QPEIVFHMAAQP----LVRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG 152 (357)
T ss_dssp CCSEEEECCSCC----CHHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred CCCEEEECCCCc----ccccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence 589999999952 222345667889999999999999998642 2357999999975321 234
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhc------cCCeEEEEeecccccChh
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWA------KDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~------~~gv~v~~v~PG~v~t~~ 204 (218)
+...|+.+|.+.+.+++.++.++. +.|+++++|+||.+.+|.
T Consensus 153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~ 200 (357)
T 1rkx_A 153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG 200 (357)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCC
Confidence 567899999999999999999874 458999999999998764
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-25 Score=217.80 Aligned_cols=177 Identities=20% Similarity=0.205 Sum_probs=141.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhH---HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVEL---NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~---~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+|++|||||++|||+++|++|+++|++ |++++|+..+. .+..+++...+..+..+.+|++|.++++++++++.+
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence 5799999999999999999999999995 88889886433 344555555677899999999999999999999874
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+ +++|+||||||.....++.+.+.++|++.+++|+.|++++.+.+.+.+.+. ++||++||.++..+.++...|+++|
T Consensus 1962 ~-g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ag~~g~~g~~~Y~aaK 2038 (2512)
T 2vz8_A 1962 L-GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSVSCGRGNAGQANYGFAN 2038 (2512)
T ss_dssp H-SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCHHHHTTCTTCHHHHHHH
T ss_pred c-CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecchhhcCCCCCcHHHHHHH
Confidence 6 699999999998877788899999999999999999999999998887543 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccc
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v 200 (218)
+++++|++.++.+ |++..++..|.+
T Consensus 2039 aal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2039 SAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp HHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred HHHHHHHHHHHHC----CCcEEEEEccCc
Confidence 9999999988776 788888887765
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-24 Score=176.05 Aligned_cols=172 Identities=19% Similarity=0.183 Sum_probs=135.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.+|+||||||+|+||++++++|+++|++|++++|+.+......+.+.. .+..+..+.+|++|.+++++++++ +
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 77 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------H 77 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------S
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------c
Confidence 468999999999999999999999999999999977655444444322 134578889999999999888875 3
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cCCC
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGS 163 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~~~ 163 (218)
.+|+|||+||..... ...++..+.+++|+.++.++++++ ++.+.++||++||.+.+. +...
T Consensus 78 ~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~ 149 (341)
T 3enk_A 78 PITAAIHFAALKAVG----ESVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSA 149 (341)
T ss_dssp CCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC
T ss_pred CCcEEEECccccccC----ccccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCC
Confidence 689999999964321 133445678999999999988876 555667999999966542 2223
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..+|+.+|.+.+.+++.++.++ .+++++.++|+.+..|
T Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~lRp~~v~G~ 187 (341)
T 3enk_A 150 TNPYGQTKLMAEQILRDVEAAD--PSWRVATLRYFNPVGA 187 (341)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECC
T ss_pred CChhHHHHHHHHHHHHHHhhcC--CCceEEEEeeccccCC
Confidence 4789999999999999999985 3699999999888665
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=173.52 Aligned_cols=170 Identities=16% Similarity=0.063 Sum_probs=134.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
|+||||||+|+||++++++|+++|++|++++|+. .......+.+.. ...+..+.+|++|.++++++++.. ++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~------~~ 74 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY------MP 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH------CC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc------CC
Confidence 5899999999999999999999999999998753 222222333332 235778899999999998888752 58
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------------
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------------- 159 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~----------------- 159 (218)
|+|||+||... .+.+.+++++.+++|+.++.++++++.+... .++||++||.+.+.
T Consensus 75 d~vih~A~~~~----~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~ 147 (347)
T 1orr_A 75 DSCFHLAGQVA----MTTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV 147 (347)
T ss_dssp SEEEECCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred CEEEECCcccC----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence 99999999632 1233557888999999999999999976542 25899999975432
Q ss_pred ----------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 160 ----------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 160 ----------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+..+...|+.+|.+.+.+++.++.++ |+++++|+||.+.+|.
T Consensus 148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~ 199 (347)
T 1orr_A 148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGR 199 (347)
T ss_dssp TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcC
Confidence 22356789999999999999999885 8999999999999875
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=177.15 Aligned_cols=173 Identities=20% Similarity=0.193 Sum_probs=136.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEE-EeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGS-VCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~-~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+++|+||||||+|+||++++++|+++|++|++++|+.+..+...+.+.. ....+..+ .+|++|.++++++++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~----- 82 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK----- 82 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence 45789999999999999999999999999999999988776554444322 12357777 799999887766543
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-cC---------
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HV--------- 161 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~~--------- 161 (218)
.+|+|||+||..... +++.+.+++|+.++.++++++.+ ..+.++||++||.+.+. +.
T Consensus 83 ---~~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~~ 149 (342)
T 1y1p_A 83 ---GAAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLD 149 (342)
T ss_dssp ---TCSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred ---CCCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcccC
Confidence 579999999964321 24677899999999999999853 23457999999976652 11
Q ss_pred ---------------------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 162 ---------------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 162 ---------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
.+...|+.+|.+.+.+++.+++++.. ++++++++||.+.+|+.
T Consensus 150 E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~ 213 (342)
T 1y1p_A 150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIF 213 (342)
T ss_dssp TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCS
T ss_pred ccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCC
Confidence 12357999999999999999999865 89999999999988764
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-25 Score=174.10 Aligned_cols=158 Identities=16% Similarity=0.185 Sum_probs=126.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.+.+|+++||||+|+||++++++|+++|+ +|++++|+.+..+... ...+..+.+|++|.++++++++
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~----- 83 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ----- 83 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS-----
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc-----
Confidence 36789999999999999999999999999 9999999876432211 1246778999999888766543
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
.+|+||||||... ..+++++.+++|+.++.++++++ .+.+.++||++||..+..+ ...+|+++|
T Consensus 84 ---~~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~--~~~~Y~~sK 147 (242)
T 2bka_A 84 ---GHDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQVK 147 (242)
T ss_dssp ---SCSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred ---CCCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC--CcchHHHHH
Confidence 5799999999632 12457788999999999988876 4555679999999877653 457899999
Q ss_pred HHHHHHHHHHHHHhccCCe-EEEEeecccccChhh
Q 027816 172 AAMNQLTRNLACEWAKDNI-RTNSVAPWYTKTSLV 205 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv-~v~~v~PG~v~t~~~ 205 (218)
++++.+++.+ ++ ++++|+||++.||+.
T Consensus 148 ~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~ 175 (242)
T 2bka_A 148 GEVEAKVEEL-------KFDRYSVFRPGVLLCDRQ 175 (242)
T ss_dssp HHHHHHHHTT-------CCSEEEEEECCEEECTTG
T ss_pred HHHHHHHHhc-------CCCCeEEEcCceecCCCC
Confidence 9999998654 45 899999999999864
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-23 Score=174.50 Aligned_cols=171 Identities=18% Similarity=0.165 Sum_probs=132.3
Q ss_pred CcEEEEecCCCchHHHHHHHHH-hCCCeEEEecCChhh---------HHHHH---HHhhhC--CCe---EEEEEeeCCCH
Q 027816 17 GMTALVTGGTRGIGQATVEELA-GLGAVVHTCSRNEVE---------LNKCL---KEWQSK--GFV---VSGSVCDAASP 78 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~-~~G~~V~~~~r~~~~---------~~~~~---~~~~~~--~~~---v~~~~~D~~~~ 78 (218)
+++||||||+|+||++++++|+ ++|++|++++|+... .+... +.+... ... +..+.+|+++.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 999999999887543 23332 222111 113 77889999999
Q ss_pred HHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc
Q 027816 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL 158 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~ 158 (218)
+++.+++++ + +++|+|||+||..... .+.+++.+.+++|+.++.++++++ .+.+.++||++||.+.+
T Consensus 82 ~~~~~~~~~----~-~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~ 148 (397)
T 1gy8_A 82 DFLNGVFTR----H-GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF 148 (397)
T ss_dssp HHHHHHHHH----S-CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred HHHHHHHHh----c-CCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHh
Confidence 998887764 3 4699999999964221 134667889999999999999987 44456799999996543
Q ss_pred CcCC------------------CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 159 SHVG------------------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 159 ~~~~------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.... ....|+.+|.+.+.+++.++.++ |+++++++||.+..|
T Consensus 149 g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~ 208 (397)
T 1gy8_A 149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA 208 (397)
T ss_dssp BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred CCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCC
Confidence 2211 25789999999999999999986 899999999988654
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-23 Score=174.18 Aligned_cols=176 Identities=15% Similarity=0.098 Sum_probs=133.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH----------------HHHHh-hhCCCeEEEEEeeCCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK----------------CLKEW-QSKGFVVSGSVCDAAS 77 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~----------------~~~~~-~~~~~~v~~~~~D~~~ 77 (218)
..+++||||||+|+||++++++|+++|++|++++|....... ....+ ......+..+.+|+++
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 357899999999999999999999999999999886543211 11111 1113457788999999
Q ss_pred HHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEecCC
Q 027816 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVG 156 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss~~ 156 (218)
.+++.++++.. ++|+|||+||...... ...+++++.+.+++|+.++.++++++.+. +. .+||++||.+
T Consensus 89 ~~~~~~~~~~~------~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~ 157 (404)
T 1i24_A 89 FEFLAESFKSF------EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMG 157 (404)
T ss_dssp HHHHHHHHHHH------CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGG
T ss_pred HHHHHHHHhcc------CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHH
Confidence 99998888754 5799999999643221 12356777889999999999999998542 33 4899999975
Q ss_pred ccC------------------------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 157 GLS------------------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 157 ~~~------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+. +.....+|+.+|.+.+.+++.++.++ |+++++|+||.+.+|.
T Consensus 158 vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~ 226 (404)
T 1i24_A 158 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK 226 (404)
T ss_dssp GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred HhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCC
Confidence 432 22345789999999999999998885 8999999999998764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.9e-24 Score=175.72 Aligned_cols=172 Identities=14% Similarity=0.102 Sum_probs=132.6
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..++++|+||||||+|+||++++++|+++|++|++++|+.+...... .....+..+.+|++|.+++++++++.
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~l~~v~~~~~Dl~d~~~~~~~~~~~--- 87 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL----PPVAGLSVIEGSVTDAGLLERAFDSF--- 87 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS----CSCTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh----hccCCceEEEeeCCCHHHHHHHHhhc---
Confidence 34678899999999999999999999999999999999654322111 11135788899999999998888765
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-----C----
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-----G---- 162 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----~---- 162 (218)
.+|+|||+||..... +.++++ +++|+.++.++++++. +.+.++||++||.+.+... +
T Consensus 88 ---~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~E~ 153 (330)
T 2pzm_A 88 ---KPTHVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPATVPIPIDSP 153 (330)
T ss_dssp ---CCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSSSSBCTTCC
T ss_pred ---CCCEEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCccCCCCcCCC
Confidence 579999999975322 345565 9999999999999985 3345799999998665433 2
Q ss_pred --CCchhhhhHHHHHHHHHHHHHHhccCCeE-EEEeecccccChhhHH
Q 027816 163 --SGSIYGATKAAMNQLTRNLACEWAKDNIR-TNSVAPWYTKTSLVER 207 (218)
Q Consensus 163 --~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~-v~~v~PG~v~t~~~~~ 207 (218)
+...|+.+|.+++.+++.+ ++....+| ++.+.||. .+++...
T Consensus 154 ~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~ 198 (330)
T 2pzm_A 154 TAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPT 198 (330)
T ss_dssp CCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHH
Confidence 5679999999999999887 55555677 67788886 5555443
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=171.53 Aligned_cols=164 Identities=20% Similarity=0.125 Sum_probs=132.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
..|+||||||+|+||++++++|+++|++|++++|+.+. +. + .+..+.+|++|.++++++++. ++
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~------~~ 74 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD------IK 74 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH------HC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh------cC
Confidence 34799999999999999999999999999999998764 21 1 477889999999999888875 26
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-------------CC
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-------------VG 162 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-------------~~ 162 (218)
+|+|||+||.... +.+.+++.+.+++|+.++.++++++ +.+ .+.++||++||.+.+.. .+
T Consensus 75 ~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~ 147 (321)
T 2pk3_A 75 PDYIFHLAAKSSV----KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLR 147 (321)
T ss_dssp CSEEEECCSCCCH----HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCB
T ss_pred CCEEEEcCcccch----hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCC
Confidence 8999999996431 1122357889999999999999998 443 24579999999865432 24
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+..+|+.+|.+.+.+++.++.++ |++++.++||.+.+|..
T Consensus 148 ~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~ 187 (321)
T 2pk3_A 148 PMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQ 187 (321)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred CCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCC
Confidence 56799999999999999999884 89999999999987753
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=9.9e-24 Score=166.83 Aligned_cols=164 Identities=17% Similarity=0.067 Sum_probs=126.4
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhC--CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+.+|+++||||+|+||++++++|+++ |++|++++|+.++.+.. ...+..+.+|++|.++++++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------ 68 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------ 68 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence 45789999999999999999999999 89999999987665432 2346678899999999887765
Q ss_pred CCcccEEEecCCCCCCCC---------CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC
Q 027816 93 NGKLNILVNNVGTNIRKP---------TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~---------~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~ 163 (218)
.+|+|||+||...... ..+...+++.+.+++|+.++.++++++. +.+.++||++||..+..+.+.
T Consensus 69 --~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~ 142 (253)
T 1xq6_A 69 --GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHP 142 (253)
T ss_dssp --TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCG
T ss_pred --CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCCCCCCc
Confidence 3799999999753211 1222334455678999999999998874 334579999999877654443
Q ss_pred Cch-----hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 164 GSI-----YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 164 ~~~-----Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
..+ |+.+|.+++.+++. .|+++++|+||.+.++.
T Consensus 143 ~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~ 181 (253)
T 1xq6_A 143 LNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKE 181 (253)
T ss_dssp GGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSC
T ss_pred cccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCC
Confidence 444 55699999988652 68999999999999875
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=172.11 Aligned_cols=174 Identities=14% Similarity=0.032 Sum_probs=136.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh----hHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV----ELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
+++++|+||||||+|+||++++++|+++|++|++++|+.. .++...+.+... ...+..+.+|++|.+++.++++
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 101 (352)
T 1sb8_A 23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA- 101 (352)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-
Confidence 4567899999999999999999999999999999998653 233332222110 1357888999999998877765
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-----
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----- 162 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~----- 162 (218)
.+|+|||+||..... .+.+++++.+++|+.++.++++++. +.+.++||++||...+.+.+
T Consensus 102 -------~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~ 166 (352)
T 1sb8_A 102 -------GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAAR----DAKVQSFTYAASSSTYGDHPGLPKV 166 (352)
T ss_dssp -------TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred -------CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHhcCCCCCCCCC
Confidence 479999999963211 2346688899999999999999984 34557999999976654332
Q ss_pred ------CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 163 ------SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 163 ------~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+...|+.+|.+.+.+++.++.++ |+++++|+||.+.+|..
T Consensus 167 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 212 (352)
T 1sb8_A 167 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQ 212 (352)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTC
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCC
Confidence 35789999999999999999885 79999999999988753
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.90 E-value=3e-23 Score=171.03 Aligned_cols=170 Identities=18% Similarity=0.127 Sum_probs=131.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChh--hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++||||||+|+||++++++|+++| ++|++++|+.. ..+.. +++. ....+..+.+|++|.+++++++.
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~----- 74 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELVR----- 74 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHH-----
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHhh-----
Confidence 45789999999999999999999997 89999988642 11111 1111 13457888999999999888772
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------c
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------H 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~ 160 (218)
.+|+|||+||... .+.+.+++.+.+++|+.++.++++++.+. ...++||++||.+.+. +
T Consensus 75 ---~~d~vih~A~~~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~ 144 (336)
T 2hun_A 75 ---KVDGVVHLAAESH----VDRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDR 144 (336)
T ss_dssp ---TCSEEEECCCCCC----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBC
T ss_pred ---CCCEEEECCCCcC----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCC
Confidence 5799999999632 12234567889999999999999999765 2236999999965322 3
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
.++..+|+.+|.+.+.+++.++.++ |++++.++||.+.+|..
T Consensus 145 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~ 186 (336)
T 2hun_A 145 LMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQ 186 (336)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTC
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCC
Confidence 3456789999999999999999884 89999999999988763
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=172.96 Aligned_cols=172 Identities=17% Similarity=0.158 Sum_probs=134.3
Q ss_pred EEEEecCCCchHHHHHHHHHhC-CCeEEEecCChh--hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 19 TALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+||||||+|+||++++++|+++ |++|++++|+.. ..+.. +++. ....+..+.+|++|.+++.+++++. .
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~ 73 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQY------Q 73 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHHH------C
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhhc------C
Confidence 5999999999999999999998 799999988642 11111 1111 1345788899999999998888752 5
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-----CCeEEEEecCCccC-----------
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-----VGSIVFISSVGGLS----------- 159 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-----~~~iv~~ss~~~~~----------- 159 (218)
+|+|||+||... .+.+.+++++.+++|+.++.++++++.+.|...+ .++||++||.+.+.
T Consensus 74 ~d~vih~A~~~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 149 (361)
T 1kew_A 74 PDAVMHLAAESH----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp CSEEEECCSCCC----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CCEEEECCCCcC----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence 899999999642 1234456788999999999999999988764321 25999999964321
Q ss_pred ----------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 160 ----------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 160 ----------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+.++...|+.+|.+++.+++.++.++ |+++++|+||.+.+|..
T Consensus 150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~ 202 (361)
T 1kew_A 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH 202 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCC
Confidence 12456789999999999999999885 79999999999988764
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=157.52 Aligned_cols=144 Identities=10% Similarity=0.039 Sum_probs=117.9
Q ss_pred CcEEEEecCCCchHHHHHHHHH-hCCCeEEEecCChh-hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELA-GLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|+++||||+|+||++++++|+ ++|++|++++|+.+ .+++.. .....+..+.+|++|.++++++++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------- 72 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------- 72 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT--------
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc--------
Confidence 3689999999999999999999 89999999999987 554432 233468889999999999888775
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCc---------
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS--------- 165 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~--------- 165 (218)
.+|+||||||.. |+. .+.+++.+++.+.++||++||..+..+.+...
T Consensus 73 ~~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~ 128 (221)
T 3r6d_A 73 NAEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLP 128 (221)
T ss_dssp TCSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSC
T ss_pred CCCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccc
Confidence 469999999852 222 57777777887778999999998877655443
Q ss_pred -hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 166 -IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 166 -~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.|+.+|.+++.+.+. .|++++.|+||++.++
T Consensus 129 ~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 129 ISYVQGERQARNVLRE-------SNLNYTILRLTWLYND 160 (221)
T ss_dssp HHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECC
T ss_pred cHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCC
Confidence 899999999987752 6899999999999887
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.6e-23 Score=170.03 Aligned_cols=190 Identities=19% Similarity=0.119 Sum_probs=150.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHH-hCCCeEEEecCChhh------------HHHHHHHhhhCCCeEEEEEeeCCCHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELA-GLGAVVHTCSRNEVE------------LNKCLKEWQSKGFVVSGSVCDAASPDQ 80 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~-~~G~~V~~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~D~~~~~~ 80 (218)
...+|++||||||+|||++.+..|+ +.|+.++++.+..+. .....+.+...+.....+.||+++.+.
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI 126 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence 4568999999999999999999998 689998888765432 223455566778889999999999999
Q ss_pred HHHHHHHHHhhcCCcccEEEecCCCCCCC-------------CC---------------------CCCCHHHH---HHHH
Q 027816 81 REKLIQEVGSKFNGKLNILVNNVGTNIRK-------------PT---------------------IEYSAEEY---SKIM 123 (218)
Q Consensus 81 ~~~~~~~~~~~~~~~id~vv~~ag~~~~~-------------~~---------------------~~~~~~~~---~~~~ 123 (218)
++++++++.+++ |++|+||||++..... ++ ...+.+++ .+.|
T Consensus 127 i~~vi~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM 205 (401)
T 4ggo_A 127 KAQVIEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM 205 (401)
T ss_dssp HHHHHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence 999999999999 7999999999976321 11 12244444 4455
Q ss_pred HhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC--CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeeccccc
Q 027816 124 TTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG--SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 124 ~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~--~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
....++.+...+...+.|.+ .+++|.+|++.+....| +.+.++++|++++..++.|+.+++ ++++|+++||.+.
T Consensus 206 g~s~~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~v 281 (401)
T 4ggo_A 206 GGEDWERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLV 281 (401)
T ss_dssp SSHHHHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCC
T ss_pred hhhHHHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCccc
Confidence 55667777777777777754 37999999988866555 446899999999999999999986 4899999999999
Q ss_pred ChhhHHH
Q 027816 202 TSLVERV 208 (218)
Q Consensus 202 t~~~~~~ 208 (218)
|.-...+
T Consensus 282 T~AssaI 288 (401)
T 4ggo_A 282 TRASAVI 288 (401)
T ss_dssp CTTGGGS
T ss_pred cchhhcC
Confidence 9876544
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-22 Score=167.48 Aligned_cols=159 Identities=21% Similarity=0.156 Sum_probs=125.8
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+++...++|+||||||+|+||++++++|+++|++|++++|+.+. ..+..+.+|++|.+++.++++
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~--- 76 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM--- 76 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT---
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh---
Confidence 34556778999999999999999999999999999999998754 246778999999999877765
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC----------
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS---------- 159 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~---------- 159 (218)
.+|+|||+|+... .+.+++.+.+++|+.++.++++++ .+.+.++||++||...+.
T Consensus 77 -----~~d~vih~A~~~~------~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~ 141 (347)
T 4id9_A 77 -----GVSAVLHLGAFMS------WAPADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGEVYPENRPEFLPVT 141 (347)
T ss_dssp -----TCSEEEECCCCCC------SSGGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGTTTTSCSSSSBC
T ss_pred -----CCCEEEECCcccC------cchhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHHHhCCCCCCCCCcC
Confidence 4799999999532 233456889999999999999988 445567999999954332
Q ss_pred ---cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeeccccc
Q 027816 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
+......|+.+|.+.+.+++.++++ .|++++.++|+.+.
T Consensus 142 E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 142 EDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQ 183 (347)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEE
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEe
Confidence 2345678999999999999999888 58999999999888
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=8.5e-23 Score=168.53 Aligned_cols=172 Identities=17% Similarity=0.145 Sum_probs=126.7
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH--HhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK--EWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++|+||||||+|+||++++++|+++|++|+++.|+.+....... .+......+..+.+|++|.++++++++
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------ 76 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence 357899999999999999999999999999998888764332211 111111247788999999988777664
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-----------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV----------- 161 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~----------- 161 (218)
.+|+|||+|+.. ..... +...+.+++|+.++.++++++.+.. ..++||++||.++..+.
T Consensus 77 --~~d~Vih~A~~~---~~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~ 146 (337)
T 2c29_D 77 --GCTGVFHVATPM---DFESK--DPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESC 146 (337)
T ss_dssp --TCSEEEECCCCC---CSSCS--SHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTC
T ss_pred --CCCEEEEecccc---CCCCC--ChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCccc
Confidence 369999999853 11112 2335688999999999999986432 25799999997654321
Q ss_pred -----------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 162 -----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 162 -----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+...+|+.+|.+.+.+++.++++ .|+++++|+||.+.+|..
T Consensus 147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~ 198 (337)
T 2c29_D 147 WSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFI 198 (337)
T ss_dssp CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCS
T ss_pred CCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCC
Confidence 12336999999999998887765 489999999999988753
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-23 Score=168.96 Aligned_cols=176 Identities=17% Similarity=0.078 Sum_probs=128.1
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhH-HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
..+.+.+|+||||||+|+||++++++|+++| ++|+..+|..... ....+.+ .....+..+.+|++|.+++.++++.
T Consensus 18 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~ 96 (346)
T 4egb_A 18 LYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKE 96 (346)
T ss_dssp ------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred cccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhh
Confidence 3445678999999999999999999999999 6788877754211 1111111 1124688899999999999988875
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC------
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV------ 161 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~------ 161 (218)
. ++|+|||+||.... +.+.+++.+.+++|+.++.++++++ .+.+..+||++||...+...
T Consensus 97 ~------~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~~~~~ 162 (346)
T 4egb_A 97 R------DVQVIVNFAAESHV----DRSIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGKTGRF 162 (346)
T ss_dssp H------TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCSSCCB
T ss_pred c------CCCEEEECCcccch----hhhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCcCCCc
Confidence 3 58999999997432 2245667889999999999999988 44456789999997544332
Q ss_pred ------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 ------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 ------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+...|+.+|.+.+.+++.++.+. |++++.++||.+..|.
T Consensus 163 ~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 208 (346)
T 4egb_A 163 TEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPY 208 (346)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTT
T ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcC
Confidence 234789999999999999999884 8999999999887764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=167.32 Aligned_cols=171 Identities=22% Similarity=0.253 Sum_probs=129.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh------HHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE------LNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+|+||||||+|+||++++++|+++|++|++++|+... ..+..+.+.. .+..+..+.+|+++.+++++++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~- 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY- 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence 4789999999999999999999999999999875322 1111222221 1235778899999999988877642
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc---------
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--------- 160 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--------- 160 (218)
.+|+|||+||..... .+.+++.+.+++|+.++.++++++ .+.+.++||++||.+.+..
T Consensus 81 -----~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~E~ 147 (348)
T 1ek6_A 81 -----SFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEA 147 (348)
T ss_dssp -----CEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred -----CCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcCCC
Confidence 589999999964221 134567889999999999999976 4455679999999765421
Q ss_pred ---CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 161 ---VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 161 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.+...+|+.+|.+++.+++.++.+ ..+++++.++|+.+-.|
T Consensus 148 ~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 148 HPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (348)
T ss_dssp SCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence 123678999999999999999988 34699999999876543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-23 Score=161.19 Aligned_cols=150 Identities=14% Similarity=0.192 Sum_probs=124.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~~~i 96 (218)
++|+||||+|+||++++++|+++|++|++++|+.+..... ..+..+.+|++| .+++.++++ .+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~--------~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH--------GM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT--------TC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc--------CC
Confidence 3699999999999999999999999999999998754321 458889999999 888776654 47
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC-------Cchhhh
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-------GSIYGA 169 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-------~~~Y~~ 169 (218)
|+|||+||.... +.+++|+.++.++++++ ++.+.++||++||..+..+.+. ...|+.
T Consensus 65 d~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~ 128 (219)
T 3dqp_A 65 DAIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYI 128 (219)
T ss_dssp SEEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHH
T ss_pred CEEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHH
Confidence 999999997532 15678999999999887 4555679999999888776665 789999
Q ss_pred hHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 170 TKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+|.+.+.+.+ ...|++++.|+||.+.++..
T Consensus 129 sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~ 158 (219)
T 3dqp_A 129 AKHFADLYLT------KETNLDYTIIQPGALTEEEA 158 (219)
T ss_dssp HHHHHHHHHH------HSCCCEEEEEEECSEECSCC
T ss_pred HHHHHHHHHH------hccCCcEEEEeCceEecCCC
Confidence 9999999886 35799999999999988743
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.3e-23 Score=168.00 Aligned_cols=169 Identities=15% Similarity=0.141 Sum_probs=120.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHH--HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELN--KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
||+||||||+|+||++++++|+++|++|+++.| +.+... .....+......+..+.+|++|.++++++++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 73 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE------- 73 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------
Confidence 589999999999999999999999999999888 543211 0111111111247778899999998877765
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHH-HHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC---------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEE-YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS--------- 163 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~-~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~--------- 163 (218)
.+|+|||+|+.. +.+.++ +.+.+++|+.++.++++++.+. .+.++||++||.++..+.+.
T Consensus 74 -~~d~vih~A~~~------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~~e~~ 143 (322)
T 2p4h_X 74 -GCVGIFHTASPI------DFAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVLDESD 143 (322)
T ss_dssp -TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEECTTC
T ss_pred -CCCEEEEcCCcc------cCCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeecCCcc
Confidence 369999999632 122222 4568999999999999998543 13579999999865432110
Q ss_pred ------------C-chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 164 ------------G-SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 164 ------------~-~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
. .+|+.||.+.+.+++.++.+ .|+++++++||.+.+|+.
T Consensus 144 ~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~ 195 (322)
T 2p4h_X 144 WSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFV 195 (322)
T ss_dssp CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCC
T ss_pred ccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCC
Confidence 1 16999999888887776654 589999999999988864
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.5e-22 Score=167.79 Aligned_cols=173 Identities=16% Similarity=0.078 Sum_probs=136.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-----CeEEEEEeeCCCHHHHHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-----FVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
..+++|+||||||+|+||++++++|+++|++|++++|+..........+.... ..+..+.+|++|.+++.++++
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 99 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK- 99 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence 34678999999999999999999999999999999997654333333332211 458889999999998877665
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC------
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV------ 161 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~------ 161 (218)
.+|+|||+||.... ..+.+++.+.+++|+.++.++++++ .+.+..+||++||.+.+...
T Consensus 100 -------~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 164 (351)
T 3ruf_A 100 -------GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYGDHPALPKV 164 (351)
T ss_dssp -------TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred -------CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcCCCCCCCCc
Confidence 47999999996321 2345567788999999999999988 44456799999997655332
Q ss_pred -----CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 -----GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 -----~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.....|+.+|.+.+.+++.++.+. |++++.++||.+..|.
T Consensus 165 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 209 (351)
T 3ruf_A 165 EENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRR 209 (351)
T ss_dssp TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTT
T ss_pred cCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcC
Confidence 235789999999999999999884 8999999999887653
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.8e-23 Score=168.39 Aligned_cols=176 Identities=16% Similarity=0.178 Sum_probs=135.7
Q ss_pred cCCCccCCcEEEEecCCCchHHHHHHHHHhCC-------CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHH
Q 027816 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLG-------AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQRE 82 (218)
Q Consensus 10 ~~~~~~~~k~vlItGa~~giG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 82 (218)
+..+.+++|+||||||+|+||++++++|+++| ++|++++|+.+.... .....+..+.+|++|.++++
T Consensus 7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~ 80 (342)
T 2hrz_A 7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAE 80 (342)
T ss_dssp CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHH
T ss_pred CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHH
Confidence 34567889999999999999999999999999 799999987643211 12346888899999999988
Q ss_pred HHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcC
Q 027816 83 KLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHV 161 (218)
Q Consensus 83 ~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~ 161 (218)
++++ +.+|+|||+||... ..+.+++.+.+++|+.++.++++++.+...+. +.++||++||.+.+...
T Consensus 81 ~~~~-------~~~d~vih~A~~~~-----~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~ 148 (342)
T 2hrz_A 81 KLVE-------ARPDVIFHLAAIVS-----GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP 148 (342)
T ss_dssp HHHH-------TCCSEEEECCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS
T ss_pred HHHh-------cCCCEEEECCccCc-----ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC
Confidence 8775 36899999999642 12456788999999999999999987643221 24799999998655432
Q ss_pred -C----------CCchhhhhHHHHHHHHHHHHHHh--ccCCeEEEEee--cccccCh
Q 027816 162 -G----------SGSIYGATKAAMNQLTRNLACEW--AKDNIRTNSVA--PWYTKTS 203 (218)
Q Consensus 162 -~----------~~~~Y~~sK~a~~~~~~~l~~e~--~~~gv~v~~v~--PG~v~t~ 203 (218)
+ +..+|+.+|.+.+.+++.++.+. ....+|++.|. ||.+.++
T Consensus 149 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~ 205 (342)
T 2hrz_A 149 LPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA 205 (342)
T ss_dssp CCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred CCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence 1 56789999999999999988763 22346777777 8876543
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=167.80 Aligned_cols=164 Identities=21% Similarity=0.162 Sum_probs=128.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|+||++++++|+++|++|++++|..+.... .+ ...+..+.+|+++.+++++++++. .+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~---~~~~~~~~~Dl~~~~~~~~~~~~~------~~d 68 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV---PKGVPFFRVDLRDKEGVERAFREF------RPT 68 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS---CTTCCEECCCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc---ccCeEEEECCCCCHHHHHHHHHhc------CCC
Confidence 369999999999999999999999999999885432110 11 123567789999999988887642 579
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-------------CCCC
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-------------VGSG 164 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-------------~~~~ 164 (218)
+|+|+|+.... +.+.+++.+.+++|+.++.++++++. +.+.++||++||.++..+ ..+.
T Consensus 69 ~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~ 140 (311)
T 2p5y_A 69 HVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK 140 (311)
T ss_dssp EEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred EEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence 99999986321 23456688899999999999999884 445579999999722111 1245
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+|+.+|.+++.+++.+++++ |++++.++||.+.+|.
T Consensus 141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~ 177 (311)
T 2p5y_A 141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPR 177 (311)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcC
Confidence 789999999999999999884 8999999999988865
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.5e-23 Score=168.29 Aligned_cols=160 Identities=23% Similarity=0.209 Sum_probs=127.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+||||||+|+||++++++|+++|++|++++|+.+..... ....+..+.+|++|.+ +.+.++ + |
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~--d 64 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G--D 64 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C--S
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C--C
Confidence 5799999999999999999999999999999876543221 1235778899999877 544332 3 9
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cCCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~~~~~~ 166 (218)
+|||+||.. ..+.+.+++.+.+++|+.++.++++++. +.+.++||++||.+.+. +..+...
T Consensus 65 ~vih~A~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~ 136 (312)
T 3ko8_A 65 VVFHFAANP----EVRLSTTEPIVHFNENVVATFNVLEWAR----QTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV 136 (312)
T ss_dssp EEEECCSSC----SSSGGGSCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCCC----CchhhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence 999999953 2334556678899999999999999883 34557999999976542 2334688
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
|+.+|.+.+.+++.++.++ |++++.++||.+.+|.
T Consensus 137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~ 171 (312)
T 3ko8_A 137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPR 171 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTT
T ss_pred HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcC
Confidence 9999999999999999985 8999999999998875
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-23 Score=164.84 Aligned_cols=155 Identities=21% Similarity=0.240 Sum_probs=125.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|++|||||+|+||++++++|+++|++|++++|+.+... . ..+..+.+|++|.+++.++++ .+|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~--~~~~~~~~Dl~d~~~~~~~~~--------~~d 65 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------E--AHEEIVACDLADAQAVHDLVK--------DCD 65 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------C--TTEEECCCCTTCHHHHHHHHT--------TCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------C--CCccEEEccCCCHHHHHHHHc--------CCC
Confidence 68999999999999999999999999999999875311 1 236788999999998877765 479
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC------------CCc
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG------------SGS 165 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~------------~~~ 165 (218)
+|||+||... .+++.+.+++|+.++.++++++. +.+.++||++||...+...+ ...
T Consensus 66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~ 133 (267)
T 3ay3_A 66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAAR----NLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS 133 (267)
T ss_dssp EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHH----HTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence 9999999641 13467889999999999999884 34567999999986554322 357
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccc-cChh
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYT-KTSL 204 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v-~t~~ 204 (218)
.|+.+|.+++.+++.++++ .|+++++|+||.+ .++.
T Consensus 134 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~ 170 (267)
T 3ay3_A 134 LYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK 170 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC
T ss_pred hHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC
Confidence 8999999999999988765 6899999999997 5553
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=166.31 Aligned_cols=160 Identities=14% Similarity=0.144 Sum_probs=123.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|+||++++++|+++|++|++++|+.+..+. +.. ..+..+.+|++|.+++.++++ .+|
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~--~~~~~~~~Dl~d~~~~~~~~~--------~~d 79 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY--LEPECRVAEMLDHAGLERALR--------GLD 79 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG--GCCEEEECCTTCHHHHHHHTT--------TCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc--CCeEEEEecCCCHHHHHHHHc--------CCC
Confidence 589999999999999999999999999999998765432 111 246778999999998877664 479
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC--------------
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-------------- 163 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-------------- 163 (218)
+|||+||... .+.+++.+.+++|+.++.++++++.+ .+.++||++||.+.+...+.
T Consensus 80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~ 149 (342)
T 2x4g_A 80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQ----ARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP 149 (342)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHHHHHHH----HTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence 9999999532 23456788899999999999999854 34579999999876554333
Q ss_pred --CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 164 --GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 164 --~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
...|+.+|.+.+.+++.+++ . |++++.|+||.+.+|..
T Consensus 150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~ 189 (342)
T 2x4g_A 150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELD 189 (342)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCC
T ss_pred cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCC
Confidence 67899999999999999876 3 89999999999988754
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.4e-22 Score=164.15 Aligned_cols=168 Identities=17% Similarity=0.042 Sum_probs=122.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH-HHHHHhhh----CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQS----KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~----~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+.. ....+..+.+|++|.+++.++++.+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence 478999999999999999999999999999999765421 11111111 1246788899999999998888765
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------- 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------- 160 (218)
++|+|||+||.... +.+.+++.+.+++|+.++.++++++.+...+ +.++||++||.+.+..
T Consensus 78 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~ 149 (372)
T 1db3_A 78 ---QPDEVYNLGAMSHV----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTP 149 (372)
T ss_dssp ---CCSEEEECCCCCTT----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSC
T ss_pred ---CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCC
Confidence 57999999996432 2334567888999999999999998654322 2379999999754432
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecc
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG 198 (218)
..+..+|+.+|.+.+.+++.++.++ ++++..+.|.
T Consensus 150 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~ 184 (372)
T 1db3_A 150 FYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILF 184 (372)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEEC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEEC
Confidence 2346789999999999999999885 5655555543
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.5e-22 Score=168.60 Aligned_cols=168 Identities=14% Similarity=0.129 Sum_probs=131.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+..++|+||||||+|+||++++++|+++|++|++++|+.+..... ....+..+.+|++|.+++.++++
T Consensus 25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~------ 92 (379)
T 2c5a_A 25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE------ 92 (379)
T ss_dssp CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT------
T ss_pred ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC------
Confidence 344678999999999999999999999999999999976542210 11246778999999998877764
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-------------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------- 159 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------- 159 (218)
.+|+|||+||...... ...+++.+.+++|+.++.++++++. +.+.++||++||...+.
T Consensus 93 --~~d~Vih~A~~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~ 163 (379)
T 2c5a_A 93 --GVDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETTNVSLK 163 (379)
T ss_dssp --TCSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred --CCCEEEECceecCccc---ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCccCCCcC
Confidence 4799999999642111 1123577889999999999999884 44557999999975433
Q ss_pred -----cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 160 -----HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 160 -----~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+......|+.+|.+.+.+++.++.++ |+++++|+||.+.+|.
T Consensus 164 E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~ 210 (379)
T 2c5a_A 164 ESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF 210 (379)
T ss_dssp GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred cccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcC
Confidence 22345789999999999999998874 8999999999998874
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-22 Score=156.41 Aligned_cols=155 Identities=15% Similarity=0.130 Sum_probs=124.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+|+||||+|+||++++++|+++|++|++++|+.+..... ...+..+.+|++|.+++.++++ .+|
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~--------~~d 69 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK--------GAD 69 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT--------TCS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc--------CCC
Confidence 6899999999999999999999999999999998764321 2458889999999999887775 379
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC----------CCchh
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----------SGSIY 167 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~----------~~~~Y 167 (218)
+|||+||.... ..+.+++|+.++.++++++ .+.+..+||++||.....+.+ ....|
T Consensus 70 ~vi~~a~~~~~----------~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y 135 (227)
T 3dhn_A 70 AVISAFNPGWN----------NPDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL 135 (227)
T ss_dssp EEEECCCC----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred EEEEeCcCCCC----------ChhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence 99999985311 1126788999999998887 445557999999987655432 36889
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+.+|.+.+.+.+.++++ .|++++.++||.+.+|.
T Consensus 136 ~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~ 169 (227)
T 3dhn_A 136 PGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPG 169 (227)
T ss_dssp HHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESC
T ss_pred HHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCC
Confidence 99999999999888775 68999999999987764
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.1e-22 Score=163.57 Aligned_cols=159 Identities=20% Similarity=0.201 Sum_probs=124.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+||||||+|+||++++++|+++|..|++..++....+. ....+..+.+|+++ +++.++++ .+|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~--------~~d 65 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK--------GAE 65 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT--------TCS
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc--------CCC
Confidence 579999999999999999999999666665555433221 12357888999998 87776654 579
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cCCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~~~~~~ 166 (218)
+|||+|+.. ..+.+.+++.+.+++|+.++.++++++ .+.+.++||++||...+. +..+...
T Consensus 66 ~vih~a~~~----~~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~ 137 (313)
T 3ehe_A 66 EVWHIAANP----DVRIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL 137 (313)
T ss_dssp EEEECCCCC----CCC-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCCC----ChhhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence 999999953 233455668889999999999999986 344567999999976542 3345678
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
|+.+|.+.+.+++.++.++ |++++.++|+.+..|
T Consensus 138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~ 171 (313)
T 3ehe_A 138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGR 171 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEEST
T ss_pred HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCc
Confidence 9999999999999999984 899999999999776
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-22 Score=162.65 Aligned_cols=170 Identities=16% Similarity=0.025 Sum_probs=127.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH-HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.+++||||||+|+||++++++|+++|++|++++|+.+... ...+.+. ....+..+.+|++|.+++.++++.+
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------ 85 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------ 85 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc------
Confidence 4789999999999999999999999999999999765321 1122221 1235788899999999998888765
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCcC-----------C
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSHV-----------G 162 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~-----------~ 162 (218)
++|+|||+||.... +.+.+++.+.+++|+.++.++++++.+ .+ .++||++||.+.+... .
T Consensus 86 ~~d~Vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~ 157 (335)
T 1rpn_A 86 QPQEVYNLAAQSFV----GASWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPFY 157 (335)
T ss_dssp CCSEEEECCSCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred CCCEEEECccccch----hhhhhChHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence 57999999996321 111234678899999999999999853 23 2699999997554322 2
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+...|+.+|.+.+.+++.++.++ ++++..+.|+.+..|
T Consensus 158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp 195 (335)
T 1rpn_A 158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESP 195 (335)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECT
T ss_pred CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCC
Confidence 24689999999999999998874 688888888765443
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=161.11 Aligned_cols=167 Identities=19% Similarity=0.170 Sum_probs=122.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
++||||||+|+||++++++|+++|++|++++|.........+.+.. .+..+..+.+|+++.++++++++.. ++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~------~~ 74 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH------AI 74 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT------TC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc------CC
Confidence 3689999999999999999999999999887642211111111111 1234677889999999988887642 58
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cC-CCC
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HV-GSG 164 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~-~~~ 164 (218)
|+|||+||..... ...+++.+.+++|+.++.++++++ ++.+.++||++||.+.+. +. +..
T Consensus 75 D~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~ 146 (338)
T 1udb_A 75 DTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQ 146 (338)
T ss_dssp SEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred CEEEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCC
Confidence 9999999964211 123456778999999999999876 344557999999975432 11 236
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccc
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v 200 (218)
.+|+.+|.+++.+++.++.+. .++++..+.|+.+
T Consensus 147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v 180 (338)
T 1udb_A 147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNP 180 (338)
T ss_dssp SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEE
T ss_pred ChHHHHHHHHHHHHHHHHHhc--CCCceEEEeecee
Confidence 789999999999999999884 3788888887433
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=159.51 Aligned_cols=163 Identities=15% Similarity=0.162 Sum_probs=129.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+||||||+|+||++++++|+++|++|++++|+..... +.+. ..+..+.+|+++.+++++++++ ..+|
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~---~~~~~~~~D~~~~~~~~~~~~~------~~~d 69 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT---EGAKFYNGDLRDKAFLRDVFTQ------ENIE 69 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC---TTSEEEECCTTCHHHHHHHHHH------SCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC---CCcEEEECCCCCHHHHHHHHhh------cCCC
Confidence 58999999999999999999999999999988654321 1111 1467789999999998887764 2689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~ 166 (218)
+|||+||..... .+.+++.+.+++|+.++.++++++ .+.+.++||++||.+.+.. ..+...
T Consensus 70 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~ 141 (330)
T 2c20_A 70 AVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT 141 (330)
T ss_dssp EEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred EEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence 999999964211 134567889999999999999987 4445579999999755432 224578
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
|+.+|.+.+.+++.++.+ .|++++.++||.+..|
T Consensus 142 Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~ 175 (330)
T 2c20_A 142 YGETKLAIEKMLHWYSQA---SNLRYKIFRYFNVAGA 175 (330)
T ss_dssp HHHHHHHHHHHHHHHHHT---SSCEEEEEECSEEECC
T ss_pred HHHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCC
Confidence 999999999999999887 4899999999887655
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=161.65 Aligned_cols=162 Identities=14% Similarity=0.025 Sum_probs=119.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
...+++|+||||||+|+||++++++|+++|++|++++|+.+...+. +.. ...+..+.+|++|.++++++++.
T Consensus 16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~-~~~~~~~~~Dl~d~~~~~~~~~~---- 87 (333)
T 2q1w_A 16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD-HPNLTFVEGSIADHALVNQLIGD---- 87 (333)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC-CTTEEEEECCTTCHHHHHHHHHH----
T ss_pred eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh-cCCceEEEEeCCCHHHHHHHHhc----
Confidence 3456789999999999999999999999999999999975432111 111 13577889999999998888774
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC----cC------
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----HV------ 161 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~----~~------ 161 (218)
+++|+|||+||..... +.++++ +++|+.++.++++++.+ .+.++||++||.+.+. ..
T Consensus 88 --~~~D~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E 154 (333)
T 2q1w_A 88 --LQPDAVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDH 154 (333)
T ss_dssp --HCCSEEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred --cCCcEEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCC
Confidence 2689999999975322 334554 99999999999999854 4557999999976543 21
Q ss_pred --CCC-chhhhhHHHHHHHHHH-HHHHhccCCeEEEEeecccccC
Q 027816 162 --GSG-SIYGATKAAMNQLTRN-LACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 162 --~~~-~~Y~~sK~a~~~~~~~-l~~e~~~~gv~v~~v~PG~v~t 202 (218)
... ..|+.+|.+++.+++. ++ ++..+.|+.+..
T Consensus 155 ~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~g 191 (333)
T 2q1w_A 155 PRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVG 191 (333)
T ss_dssp CCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEES
T ss_pred CCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEEC
Confidence 234 7999999999999887 64 455566654443
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.2e-21 Score=161.59 Aligned_cols=167 Identities=19% Similarity=0.135 Sum_probs=128.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhC---C---CeEEEecCChhhH-HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGL---G---AVVHTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~---G---~~V~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++||||||+|+||++++++|+++ | ++|++++|+.... ....+.+. ....+..+.+|++|.+++++++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~----- 74 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL----- 74 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence 36999999999999999999997 8 8999998864210 01111111 1245788899999998877765
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS----------- 159 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~----------- 159 (218)
..+|+|||+||.... +.+.+++++.+++|+.++.++++++.+ .+.++||++||.+.+.
T Consensus 75 ---~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~ 143 (337)
T 1r6d_A 75 ---RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESS 143 (337)
T ss_dssp ---TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred ---cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEecchHHhCCCCCCCCCCCC
Confidence 258999999996321 123456678899999999999999854 3456999999965432
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+..+...|+.+|.+.+.+++.++.++ |++++.++||.+.+|.
T Consensus 144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~ 185 (337)
T 1r6d_A 144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPY 185 (337)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCC
Confidence 23456789999999999999999884 7999999999988765
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.87 E-value=5e-22 Score=165.57 Aligned_cols=166 Identities=16% Similarity=0.174 Sum_probs=120.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHh--CCCeEEEecCChhhHHHHHH-------HhhhCCCeEEEEEeeCCCHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAG--LGAVVHTCSRNEVELNKCLK-------EWQSKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~--~G~~V~~~~r~~~~~~~~~~-------~~~~~~~~v~~~~~D~~~~~~~~~ 83 (218)
.++++|+||||||+|+||++++++|++ +|++|++++|+......... ........+..+.+|+++.+++++
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 367889999999999999999999999 99999999987652110000 001123356888999999999877
Q ss_pred HHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc---
Q 027816 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--- 160 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--- 160 (218)
+ .. ..+|+|||+||.... +.+++++.+++|+.++.++++++ ++.+ .+||++||.+.+..
T Consensus 86 ~------~~-~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~vyg~~~~ 147 (362)
T 3sxp_A 86 L------EK-LHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGVYGNTKA 147 (362)
T ss_dssp H------TT-SCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGGGCSCCS
T ss_pred h------hc-cCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHHhCCCCC
Confidence 6 12 478999999995322 33457889999999999999988 4444 45999999544322
Q ss_pred -------CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeeccccc
Q 027816 161 -------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 161 -------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
..+..+|+.+|.+.+.+++.++.+ ++++.|+|+.+.
T Consensus 148 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~ 190 (362)
T 3sxp_A 148 PNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVY 190 (362)
T ss_dssp SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEE
T ss_pred CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCcee
Confidence 123456999999999999988877 444555554443
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9e-22 Score=165.02 Aligned_cols=169 Identities=14% Similarity=0.058 Sum_probs=131.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|+||||||+|+||++++++|+++| ++|++++|+.+.... .+. ....+..+.+|+++.++++++++
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~------ 98 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD------ 98 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS------
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh------
Confidence 4678999999999999999999999999 999999997654211 111 13457888999999988766543
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccC------------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLS------------ 159 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~------------ 159 (218)
.+|+|||+||.... +.+.+++.+.+++|+.++.++++++ .+. +.++||++||.+.+.
T Consensus 99 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~ 168 (377)
T 2q1s_A 99 --EYDYVFHLATYHGN----QSSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKATEE 168 (377)
T ss_dssp --CCSEEEECCCCSCH----HHHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------CC
T ss_pred --CCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCcccc
Confidence 57999999996321 1234567889999999999999988 444 456999999965321
Q ss_pred ----cC-CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 160 ----HV-GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 160 ----~~-~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+. .+..+|+.+|.+.+.+++.++.++ |++++.++||.+..|..
T Consensus 169 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 169 TDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE 216 (377)
T ss_dssp CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred cccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 22 446789999999999999998874 89999999999877653
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.2e-22 Score=163.10 Aligned_cols=166 Identities=20% Similarity=0.160 Sum_probs=128.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhC--CCeEEEecCChhhH-HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 18 MTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
|+||||||+|+||++++++|+++ |++|++++|+.... ....+.+. ...+..+.+|++|.+++.++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------- 74 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAA-------- 74 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHT--------
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc--cCCeEEEECCCCCHHHHHHHhh--------
Confidence 68999999999999999999998 89999999865211 11111111 2457888999999998877765
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC---------------
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------------- 159 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--------------- 159 (218)
.+|+|||+||... .+.+.+++++.+++|+.++.++++++.+. + .+||++||.+.+.
T Consensus 75 ~~d~vih~A~~~~----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~ 145 (348)
T 1oc2_A 75 KADAIVHYAAESH----NDNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP 145 (348)
T ss_dssp TCSEEEECCSCCC----HHHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred cCCEEEECCcccC----ccchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence 3499999999632 12234567789999999999999998654 3 3999999965331
Q ss_pred --------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 160 --------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 160 --------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+......|+.+|.+.+.+++.++.++ |+++++++||.+.+|..
T Consensus 146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~ 196 (348)
T 1oc2_A 146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQ 196 (348)
T ss_dssp TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTC
T ss_pred CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCC
Confidence 22355789999999999999999885 89999999999987754
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=162.16 Aligned_cols=169 Identities=20% Similarity=0.037 Sum_probs=126.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-----HHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
|+||||||+|+||++++++|+++|++|++++|+.+. ++...+.... ....+..+.+|++|.+++.++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence 689999999999999999999999999999987543 1111110000 1235778899999999998888765
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------- 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------- 160 (218)
++|+|||+||.... +.+.+++++.+++|+.++.++++++.+...+ +.++||++||.+.+..
T Consensus 102 ---~~d~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~~ 173 (375)
T 1t2a_A 102 ---KPTEIYNLGAQSHV----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTP 173 (375)
T ss_dssp ---CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred ---CCCEEEECCCcccc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccCC
Confidence 57999999996321 1235667889999999999999998654321 1269999999765432
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccc
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v 200 (218)
..+...|+.+|.+.+.+++.++.++ ++++..+.|+.+
T Consensus 174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~ 210 (375)
T 1t2a_A 174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNH 210 (375)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCE
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccc
Confidence 2345789999999999999999885 677777776544
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=166.41 Aligned_cols=166 Identities=13% Similarity=0.052 Sum_probs=124.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh---hHHHHHHHhhh---------CCCeEEEEEeeCCCHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV---ELNKCLKEWQS---------KGFVVSGSVCDAASPDQR 81 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~---------~~~~v~~~~~D~~~~~~~ 81 (218)
...+|+||||||+|+||++++++|+++|++|++++|+.+ ..+...+.+.. ....+..+.+|+++.+++
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 145 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 145 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence 345789999999999999999999999999999999877 23333222211 134688899999998887
Q ss_pred HHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc---
Q 027816 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL--- 158 (218)
Q Consensus 82 ~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~--- 158 (218)
. .+ +.+|+|||+||... ..+++.+.+++|+.++.++++++.+ +..+||++||....
T Consensus 146 ~--------~~-~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~ 204 (427)
T 4f6c_A 146 V--------LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYF 204 (427)
T ss_dssp C--------CS-SCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEE
T ss_pred C--------Cc-CCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCc
Confidence 6 23 58999999999642 2346788899999999999999854 34699999997760
Q ss_pred ---------------CcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 159 ---------------SHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 159 ---------------~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+......|+.+|.+.+.+++.++. .|+++++|+||.|.++.
T Consensus 205 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~ 261 (427)
T 4f6c_A 205 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPY 261 (427)
T ss_dssp CSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCS
T ss_pred cCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCC
Confidence 0123678999999999999998753 58999999999987764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.5e-21 Score=161.40 Aligned_cols=174 Identities=19% Similarity=0.078 Sum_probs=128.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-----HHHHHHHhhhCCC-eEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
|+||||||+|+||++++++|+++|++|++++|+.+. ++...+....... .+..+.+|++|.+++.++++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 689999999999999999999999999999987653 2211111111112 5788899999999998888765
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-CCCCeEEEEecCCccC----------c
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLS----------H 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~~~~~iv~~ss~~~~~----------~ 160 (218)
++|+|||+||.... +.+.+++.+.+++|+.++.++++++.+...+ .+.++||++||.+.+. +
T Consensus 106 ---~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~ 178 (381)
T 1n7h_A 106 ---KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 178 (381)
T ss_dssp ---CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred ---CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence 57999999996321 2235678889999999999999999887644 2346999999976443 2
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccC---CeEEEEeeccccc
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKD---NIRTNSVAPWYTK 201 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~---gv~v~~v~PG~v~ 201 (218)
..+...|+.+|.+.+.+++.++.+++-. ...++.+.||...
T Consensus 179 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~ 222 (381)
T 1n7h_A 179 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGE 222 (381)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCT
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCC
Confidence 3456789999999999999999886321 1233455566544
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.2e-21 Score=146.34 Aligned_cols=151 Identities=17% Similarity=0.105 Sum_probs=117.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+++||||+|+||++++++|+++|++|++++|+.+..... ....+..+.+|++|.+++.++++ .+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~--------~~ 68 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA--------GQ 68 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT--------TC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc--------CC
Confidence 47899999999999999999999999999999987653211 13457888999999998877664 36
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC----CCchhhhhHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----SGSIYGATKA 172 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~----~~~~Y~~sK~ 172 (218)
|+|||++|.... .+. .++|+.++.++++++. +.+.++||++||.......+ ....|+.+|.
T Consensus 69 d~vi~~a~~~~~---~~~--------~~~n~~~~~~~~~~~~----~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~ 133 (206)
T 1hdo_A 69 DAVIVLLGTRND---LSP--------TTVMSEGARNIVAAMK----AHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI 133 (206)
T ss_dssp SEEEECCCCTTC---CSC--------CCHHHHHHHHHHHHHH----HHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred CEEEECccCCCC---CCc--------cchHHHHHHHHHHHHH----HhCCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence 999999996432 111 1378888888888774 34557999999986655443 5678999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccc-cCh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYT-KTS 203 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v-~t~ 203 (218)
+++.+.+ ..+++++.++||.+ .++
T Consensus 134 ~~e~~~~-------~~~i~~~~lrp~~~~~~~ 158 (206)
T 1hdo_A 134 RMHKVLR-------ESGLKYVAVMPPHIGDQP 158 (206)
T ss_dssp HHHHHHH-------HTCSEEEEECCSEEECCC
T ss_pred HHHHHHH-------hCCCCEEEEeCCcccCCC
Confidence 9999873 25899999999998 444
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-22 Score=165.06 Aligned_cols=168 Identities=20% Similarity=0.144 Sum_probs=120.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH--HHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK--CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+|+||||||+|+||++++++|+++|++|+++.|+.+.... ....+. ....+..+.+|++|.+++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------- 79 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------- 79 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT--------
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc--------
Confidence 6899999999999999999999999999988887653211 112222 12357788999999888776664
Q ss_pred cccEEEecCCCCCCCCCCCCCHHH-HHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc---------C---
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEE-YSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------V--- 161 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~-~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---------~--- 161 (218)
.+|+|||+|+... . ..++ ..+.+++|+.++.++++++.+.. +.++||++||.++..+ .
T Consensus 80 ~~D~Vih~A~~~~---~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~ 150 (338)
T 2rh8_A 80 GCDFVFHVATPVH---F---ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEK 150 (338)
T ss_dssp TCSEEEEESSCCC---C------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTT
T ss_pred CCCEEEEeCCccC---C---CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChh
Confidence 3699999998531 1 1222 24588999999999999985421 2579999999753210 0
Q ss_pred ---------C---CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 162 ---------G---SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 162 ---------~---~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+ ...+|+.||.+.+.+++.++++ .|+++++|+||.+.+|..
T Consensus 151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~ 203 (338)
T 2rh8_A 151 NWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSL 203 (338)
T ss_dssp TTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCS
T ss_pred hccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCC
Confidence 0 1126999999999998887765 489999999999988753
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.5e-21 Score=160.89 Aligned_cols=167 Identities=15% Similarity=0.125 Sum_probs=128.7
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCC-CHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA-SPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~-~~~~~~~~~~~~~ 89 (218)
..++++|+||||||+|+||++++++|+++ |++|++++|+.+...... ....+..+.+|++ +.+.+.++++
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~~~~Dl~~d~~~~~~~~~--- 90 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV-----KHERMHFFEGDITINKEWVEYHVK--- 90 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG-----GSTTEEEEECCTTTCHHHHHHHHH---
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc-----cCCCeEEEeCccCCCHHHHHHHhc---
Confidence 34567899999999999999999999998 999999999876543221 1245888999999 9999888776
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC--------
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-------- 161 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-------- 161 (218)
.+|+|||+|+..... ...++..+.+++|+.++.++++++. +.+ .+||++||...+...
T Consensus 91 -----~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~~----~~~-~~~v~~SS~~vyg~~~~~~~~e~ 156 (372)
T 3slg_A 91 -----KCDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYGMCADEQFDPD 156 (372)
T ss_dssp -----HCSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHHH----HHT-CEEEEECCGGGGBSCCCSSBCTT
T ss_pred -----cCCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHHH----HhC-CcEEEeCcHHHhCCCCCCCCCcc
Confidence 369999999964321 2345567889999999999999884 334 699999996433211
Q ss_pred ----------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 ----------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 ----------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+...|+.+|.+.+.+++.++.+ |++++.++|+.+..|.
T Consensus 157 ~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~ 205 (372)
T 3slg_A 157 ASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPG 205 (372)
T ss_dssp TCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSS
T ss_pred ccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCC
Confidence 23347999999999999988766 8999999999986653
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=161.79 Aligned_cols=167 Identities=14% Similarity=0.185 Sum_probs=125.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+||||||+|+||++++++|+++| ++|++++|+..... .+.+. .+. +.+|+++.+.++++++. ..+
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~~ 113 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EEF 113 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--ccc
Confidence 4567899999999999999999999999 89999998765421 01111 122 56899988888777653 123
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC----------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG---------- 162 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~---------- 162 (218)
+++|+|||+||.... +.+++++.+++|+.++.++++++.+ .+. +||++||.+.+...+
T Consensus 114 -~~~d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~~ 181 (357)
T 2x6t_A 114 -GDVEAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYE 181 (357)
T ss_dssp -SSCCEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGGC
T ss_pred -CCCCEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCCC
Confidence 479999999996432 2234678899999999999999854 344 899999976543322
Q ss_pred -CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 163 -SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 163 -~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
....|+.+|.+.+.+++.++.+ .|++++.|+||.+.+|.
T Consensus 182 ~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~ 221 (357)
T 2x6t_A 182 KPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPR 221 (357)
T ss_dssp CCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSS
T ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCC
Confidence 2568999999999999999877 48999999999988764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=157.73 Aligned_cols=161 Identities=16% Similarity=0.152 Sum_probs=127.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhC--CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+|+||||||+|+||++++++|+++ |++|++++|+.+... .. . .+..+.+|++|.+++++++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----~---~~~~~~~D~~d~~~~~~~~~~~------ 67 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----N---SGPFEVVNALDFNQIEHLVEVH------ 67 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----H---SSCEEECCTTCHHHHHHHHHHT------
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----C---CCceEEecCCCHHHHHHHHhhc------
Confidence 478999999999999999999999 899999998765421 11 1 2567789999999988887643
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc------------CC
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------VG 162 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~------------~~ 162 (218)
.+|+|||+||.... ...+++.+.+++|+.++.++++++. +.+.++||++||...+.. ..
T Consensus 68 ~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~ 138 (312)
T 2yy7_A 68 KITDIYLMAALLSA-----TAEKNPAFAWDLNMNSLFHVLNLAK----AKKIKKIFWPSSIAVFGPTTPKENTPQYTIME 138 (312)
T ss_dssp TCCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----TTSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred CCCEEEECCccCCC-----chhhChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence 57999999996321 1235678889999999999999884 445579999999765432 12
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
...+|+.+|.+.+.+++.++.++ |++++.++||.+..+
T Consensus 139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~ 176 (312)
T 2yy7_A 139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISW 176 (312)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECS
T ss_pred CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecC
Confidence 35789999999999999998874 899999999887663
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=152.93 Aligned_cols=153 Identities=12% Similarity=0.084 Sum_probs=122.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+|+||||||+|+||++++++|+++|++|++++|+. .+|++|.+++.+++++. .
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~ 55 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------R 55 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------C
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------C
Confidence 467899999999999999999999999999988763 27999999988887754 5
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc--------------C
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--------------V 161 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--------------~ 161 (218)
+|+|||+|+.... .+...+++.+.+++|+.++.++++++. +.+..+||++||...+.. .
T Consensus 56 ~d~vih~a~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~ 128 (321)
T 1e6u_A 56 IDQVYLAAAKVGG---IVANNTYPADFIYQNMMIESNIIHAAH----QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGT 128 (321)
T ss_dssp CSEEEECCCCCCC---HHHHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred CCEEEEcCeecCC---cchhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence 7999999996321 112345567889999999999999884 445569999999765421 1
Q ss_pred C-C-CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 G-S-GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 ~-~-~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+ . ...|+.+|.+.+.+++.+++++ |++++.++||.+..|.
T Consensus 129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~ 170 (321)
T 1e6u_A 129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH 170 (321)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcC
Confidence 1 1 2589999999999999998874 8999999999887653
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=156.28 Aligned_cols=154 Identities=14% Similarity=0.126 Sum_probs=96.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+||||||+|+||++++++|+++|++|++++|+.+. . . .+.+|+++.+++.++++.. ++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~---~--~~~~Dl~d~~~~~~~~~~~------~~ 61 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------P---K--FEQVNLLDSNAVHHIIHDF------QP 61 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------C---C--eEEecCCCHHHHHHHHHhh------CC
Confidence 5799999999999999999999999999999987543 0 1 4678999999988887754 57
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc----------CCCCch
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------VGSGSI 166 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------~~~~~~ 166 (218)
|+|||+||.... +.+.+++.+.+++|+.++.++++++.+ .+ .+||++||...+.+ ..+...
T Consensus 62 d~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~ 132 (315)
T 2ydy_A 62 HVIVHCAAERRP----DVVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNL 132 (315)
T ss_dssp SEEEECC-----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred CEEEECCcccCh----hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence 999999996432 234567889999999999999999854 23 49999999876543 345678
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccC
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t 202 (218)
|+.+|.+++.+++.++.++ ..+|++.|. |+.++
T Consensus 133 Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~ 165 (315)
T 2ydy_A 133 YGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEK 165 (315)
T ss_dssp HHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSS
T ss_pred HHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCc
Confidence 9999999999999886443 356777776 66555
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-21 Score=151.94 Aligned_cols=151 Identities=14% Similarity=0.136 Sum_probs=120.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+|+++||||+|+||++++++|+++|+ +|++++|+.+. ....+..+.+|+++.+++.+++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~-------- 65 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS-------- 65 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence 468999999999999999999999998 99999998764 1234677788987776654433
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+|+|||+||.... +.+++++.+++|+.++.++++++. +.+.++||++||...... ....|+.+|.+
T Consensus 66 --~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~ 131 (215)
T 2a35_A 66 --IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK--SSIFYNRVKGE 131 (215)
T ss_dssp --CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred --hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCcccCCC--CccHHHHHHHH
Confidence 7999999996321 234577889999999999999874 445578999999876543 35789999999
Q ss_pred HHHHHHHHHHHhccCCeE-EEEeecccccChhh
Q 027816 174 MNQLTRNLACEWAKDNIR-TNSVAPWYTKTSLV 205 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~-v~~v~PG~v~t~~~ 205 (218)
++.+++. .|++ ++.|+||.+.+|..
T Consensus 132 ~e~~~~~-------~~~~~~~~vrp~~v~g~~~ 157 (215)
T 2a35_A 132 LEQALQE-------QGWPQLTIARPSLLFGPRE 157 (215)
T ss_dssp HHHHHTT-------SCCSEEEEEECCSEESTTS
T ss_pred HHHHHHH-------cCCCeEEEEeCceeeCCCC
Confidence 9998764 3898 99999999988753
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=154.10 Aligned_cols=162 Identities=14% Similarity=0.095 Sum_probs=124.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCH-HHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP-DQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~ 95 (218)
|+||||||+|+||++++++|+++ |++|++++|+.+..+... ....+..+.+|+++. +.++++++ .
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~ 67 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K 67 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------C
Confidence 47999999999999999999998 899999999876543211 123578889999984 45665554 3
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-------------
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG------------- 162 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~------------- 162 (218)
+|+|||+||..... ...+++.+.+++|+.++.++++++. +.+ .+||++||...+...+
T Consensus 68 ~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~ 138 (345)
T 2bll_A 68 CDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV 138 (345)
T ss_dssp CSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred CCEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence 69999999964211 1234567889999999999999884 344 7999999965432211
Q ss_pred -----CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 163 -----SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 163 -----~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
....|+.+|.+.+.+++.++++. |++++.++||.+..|.
T Consensus 139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~ 182 (345)
T 2bll_A 139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPR 182 (345)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSS
T ss_pred CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCC
Confidence 12379999999999999998874 8999999999986654
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=161.99 Aligned_cols=168 Identities=15% Similarity=0.126 Sum_probs=126.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhC---CCeEEEecCChhhHHHHHH---Hhh------------hCCCeEEEEEee
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLK---EWQ------------SKGFVVSGSVCD 74 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~---G~~V~~~~r~~~~~~~~~~---~~~------------~~~~~v~~~~~D 74 (218)
...++|+||||||+|+||++++++|+++ |++|++++|+.+......+ .+. .....+..+.+|
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence 4567899999999999999999999999 8999999998764322111 110 012468899999
Q ss_pred CC------CHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCe
Q 027816 75 AA------SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGS 148 (218)
Q Consensus 75 ~~------~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~ 148 (218)
++ +.++++++++ .+|+|||+||.... +++.+.+++|+.++.++++++. +.+..+
T Consensus 149 l~~~~~gld~~~~~~~~~--------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa~----~~~~~~ 208 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAE--------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIAL----TTKLKP 208 (478)
T ss_dssp TTSGGGGCCHHHHHHHHH--------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHHT----SSSCCC
T ss_pred CCCcccCCCHHHHHHHHc--------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHHH----hCCCCe
Confidence 98 5566666554 46999999997543 2234678899999999999883 445568
Q ss_pred EEEEecCCccCcCCC----------------------CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 149 IVFISSVGGLSHVGS----------------------GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 149 iv~~ss~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
||++||.+.+..... ...|+.+|.+.+.+++.++.+. |+++++|+||.|..+
T Consensus 209 ~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 209 FTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD 282 (478)
T ss_dssp EEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred EEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence 999999654332111 1339999999999999998874 899999999999654
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-20 Score=145.47 Aligned_cols=150 Identities=20% Similarity=0.213 Sum_probs=113.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|+||++++++|+++|++|++++|+.++..... ...+..+.+|++|.++ +. + ..+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~-----~~----~-~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE-----AD----L-DSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH-----HH----H-TTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH-----hh----c-ccCC
Confidence 36999999999999999999999999999999987755331 1347788999999887 22 2 4689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC--------------
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS-------------- 163 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~-------------- 163 (218)
+|||+||...... ..++|+.++.++++++ ++.+ +++|++||.++..+.+.
T Consensus 65 ~vi~~ag~~~~~~-----------~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
T 3h2s_A 65 AVVDALSVPWGSG-----------RGYLHLDFATHLVSLL----RNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS 128 (224)
T ss_dssp EEEECCCCCTTSS-----------CTHHHHHHHHHHHHTC----TTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG
T ss_pred EEEECCccCCCcc-----------hhhHHHHHHHHHHHHH----HHcC-CcEEEEecceeeccCCCCccccccCCCCCcc
Confidence 9999999751110 1246777776666655 6666 89999999876654433
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
...|+.+|.+.+.+ +.+. ...|++++.|+||.+.++
T Consensus 129 ~~~y~~sK~~~e~~-~~~~---~~~~i~~~ivrp~~v~g~ 164 (224)
T 3h2s_A 129 QPWYDGALYQYYEY-QFLQ---MNANVNWIGISPSEAFPS 164 (224)
T ss_dssp STTHHHHHHHHHHH-HHHT---TCTTSCEEEEEECSBCCC
T ss_pred chhhHHHHHHHHHH-HHHH---hcCCCcEEEEcCccccCC
Confidence 67899999998854 2222 357999999999999876
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.84 E-value=3e-20 Score=151.71 Aligned_cols=155 Identities=17% Similarity=0.132 Sum_probs=123.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+||||||+|+||++++++|+++|++|++++|+.+... .+ .+..+.+|++ .+++.++++ .+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~~--------~~ 63 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQLN--------DV 63 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT--------TC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhhc--------CC
Confidence 378999999999999999999999999999999844322 21 4778899999 888776654 57
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCc
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGS 165 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~ 165 (218)
|+|||+|+..... ++.+.+++|+.++.++++++ ++.+..+||++||...+.. .....
T Consensus 64 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~ 131 (311)
T 3m2p_A 64 DAVVHLAATRGSQ--------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDL 131 (311)
T ss_dssp SEEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred CEEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence 9999999975432 34567889999999999988 4555678999999654322 22357
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.|+.+|.+.+.+++.++.+ .|++++.++||.+..|.
T Consensus 132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 167 (311)
T 3m2p_A 132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFN 167 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSC
T ss_pred hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcC
Confidence 8999999999999999887 58999999999887654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-20 Score=146.49 Aligned_cols=149 Identities=14% Similarity=0.079 Sum_probs=104.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+..|+||||||+|+||++++++|+++| ++|++++|+.++.... ....+..+++|++|.++++++++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~------ 87 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ------ 87 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT------
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc------
Confidence 3456899999999999999999999999 8999999998764321 12357889999999999888776
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCc-------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGS------- 165 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~------- 165 (218)
.+|+||||+|.. .. ....+.+++.+++++.++||++||...+.+.+...
T Consensus 88 --~~D~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~ 143 (236)
T 3qvo_A 88 --GQDIVYANLTGE--------DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAV 143 (236)
T ss_dssp --TCSEEEEECCST--------TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC---------------
T ss_pred --CCCEEEEcCCCC--------ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhc
Confidence 469999999841 11 12245667777887778999999987765544321
Q ss_pred --hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 166 --IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 166 --~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
.+...+... ..++.+.|+++++|+||++.++..
T Consensus 144 ~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~ 178 (236)
T 3qvo_A 144 IGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDI 178 (236)
T ss_dssp -CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSC
T ss_pred ccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCC
Confidence 111122211 222346799999999999988754
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.8e-20 Score=167.44 Aligned_cols=173 Identities=21% Similarity=0.186 Sum_probs=127.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++|+||||||+|+||++++++|+++|++|++++|+........+.+.. ....+..+.+|+++.+++++++++.
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---- 83 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---- 83 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS----
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC----
Confidence 46789999999999999999999999999999998865432221222211 1234677889999999988877642
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc------------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------ 160 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~------------ 160 (218)
.+|+|||+||..... ...+...+.+++|+.++.++++++ ++.+.++||++||.+.+..
T Consensus 84 --~~D~Vih~A~~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E 153 (699)
T 1z45_A 84 --KIDSVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPE 153 (699)
T ss_dssp --CCCEEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred --CCCEEEECCcccCcC----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCccccccCCccc
Confidence 589999999964221 112334678999999999998876 3445579999999764321
Q ss_pred ---CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeeccccc
Q 027816 161 ---VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 161 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
......|+.+|.+++.+++.++.+. ..|++++.++|+.+-
T Consensus 154 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vy 196 (699)
T 1z45_A 154 ECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPI 196 (699)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEE
T ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEecccc
Confidence 1234789999999999999998875 368999999987654
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-20 Score=153.61 Aligned_cols=153 Identities=17% Similarity=0.175 Sum_probs=121.2
Q ss_pred EEEEecCCCchHHHHHHHHHhC--CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 19 TALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+||||||+|+||++++++|+++ |++|++++|+.+... .+..+.+|++|.+++.+++++. .+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~------~~ 63 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY------SI 63 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT------TC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhc------CC
Confidence 4899999999999999999998 889999988654321 2456789999999988887642 58
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC------------CCC
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV------------GSG 164 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~------------~~~ 164 (218)
|+|||+|+.... ...+++.+.+++|+.++.++++++. +.+.++||++||...+.+. .+.
T Consensus 64 d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~ 134 (317)
T 3ajr_A 64 DAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR 134 (317)
T ss_dssp CEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred cEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence 999999996321 1235578889999999999999884 4455799999997655432 136
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccc
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v 200 (218)
.+|+.+|.+.+.+++.++++ .|++++.+.|+.+
T Consensus 135 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~~ 167 (317)
T 3ajr_A 135 TMFGVTKIAAELLGQYYYEK---FGLDVRSLRYPGI 167 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEE
T ss_pred chHHHHHHHHHHHHHHHHHh---cCCeEEEEecCcE
Confidence 78999999999999998877 4899999985443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.2e-20 Score=143.93 Aligned_cols=149 Identities=16% Similarity=0.177 Sum_probs=110.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++|+||||+|+||++++++|+++|++|++++|+.++..... ..+..+.+|++|.++ +. + ..+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~-----~~----~-~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL-----SD----L-SDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH-----HH----H-TTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh-----hh----h-cCCC
Confidence 46999999999999999999999999999999987655332 347788999999887 22 2 3689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC------------CCc
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG------------SGS 165 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~------------~~~ 165 (218)
+|||+||.... ..+.|+.++.++++++ ++.+.+++|++||..+..+.+ ...
T Consensus 64 ~vi~~ag~~~~-------------~~~~~~~~~~~l~~a~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~ 126 (221)
T 3ew7_A 64 VVVDAYGISPD-------------EAEKHVTSLDHLISVL----NGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP 126 (221)
T ss_dssp EEEECCCSSTT-------------TTTSHHHHHHHHHHHH----CSCCSSEEEEECCCC-------------------CC
T ss_pred EEEECCcCCcc-------------ccchHHHHHHHHHHHH----HhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence 99999997321 1345667766666655 666668999999987765433 245
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.|+.+|.+.+.+ +.+.. ...|++++.|+||.+.++
T Consensus 127 ~y~~~k~~~e~~-~~~~~--~~~gi~~~ivrp~~v~g~ 161 (221)
T 3ew7_A 127 YYPTARAQAKQL-EHLKS--HQAEFSWTYISPSAMFEP 161 (221)
T ss_dssp CSCCHHHHHHHH-HHHHT--TTTTSCEEEEECSSCCCC
T ss_pred HHHHHHHHHHHH-HHHHh--hccCccEEEEeCcceecC
Confidence 699999999987 33333 147899999999999876
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-20 Score=151.12 Aligned_cols=162 Identities=14% Similarity=0.176 Sum_probs=122.0
Q ss_pred EEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
+||||||+|+||++++++|+++| ++|++++|+..... ...+.. +. +.+|+++.+.++++++... + +++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~-~~~d 70 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--F-GDVE 70 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--C-SSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--c-CCCc
Confidence 48999999999999999999999 89999998765421 111111 11 5689888888776665210 1 2689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-----------CCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-----------GSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----------~~~~~ 166 (218)
+|||+||.... +.+++.+.+++|+.++.++++++.+ .+. +||++||...+... .+..+
T Consensus 71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~ 139 (310)
T 1eq2_A 71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNV 139 (310)
T ss_dssp EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence 99999996432 2234677899999999999998843 345 89999997544322 22568
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
|+.+|.+.+.+++.++.+ .|++++.++||.+..|.
T Consensus 140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~ 174 (310)
T 1eq2_A 140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPR 174 (310)
T ss_dssp HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSS
T ss_pred hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcC
Confidence 999999999999998876 58999999999987764
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=155.11 Aligned_cols=166 Identities=13% Similarity=0.100 Sum_probs=121.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
..+++|+||||||+|+||++++++|+++|++|++++|+........+.+. ....+..+.+|+.+.. +
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~ 89 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y 89 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h
Confidence 34577899999999999999999999999999999986432211111111 1235778889988742 2
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-------------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------- 159 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------- 159 (218)
..+|+|||+||....... .+++.+.+++|+.++.++++++.. .+ .++|++||.+.+.
T Consensus 90 -~~~d~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~~ 159 (343)
T 2b69_A 90 -IEVDQIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWG 159 (343)
T ss_dssp -CCCSEEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred -cCCCEEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCcccccc
Confidence 468999999996432111 123567889999999999998843 33 3899999965432
Q ss_pred ---cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+......|+.+|.+.+.+++.++++. |++++.++||.+..|.
T Consensus 160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~ 204 (343)
T 2b69_A 160 HVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPR 204 (343)
T ss_dssp BCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcC
Confidence 22334679999999999999998874 8999999999887764
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.2e-20 Score=151.95 Aligned_cols=159 Identities=16% Similarity=0.097 Sum_probs=120.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++++|+||||||+|+||++++++|+++|+ +.. .....+..+.+|++|.+++.++++..
T Consensus 2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~~---- 60 (319)
T 4b8w_A 2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-----------EDWVFVSSKDADLTDTAQTRALFEKV---- 60 (319)
T ss_dssp CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHHS----
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------ccccccCceecccCCHHHHHHHHhhc----
Confidence 456789999999999999999999999997 110 01112344578999999988887742
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc------------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------ 160 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~------------ 160 (218)
++|+|||+|+.... ...+.+++.+.+++|+.++.++++++ ++.+..+||++||...+..
T Consensus 61 --~~d~Vih~A~~~~~---~~~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~ 131 (319)
T 4b8w_A 61 --QPTHVIHLAAMVGG---LFRNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIH 131 (319)
T ss_dssp --CCSEEEECCCCCCC---HHHHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGG
T ss_pred --CCCEEEECceeccc---ccccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCccccccc
Confidence 58999999997321 11122345678999999999999988 4455679999999754321
Q ss_pred ----CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 161 ----VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 161 ----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+...+|+.+|.+.+.+++.++++. |++++.++|+.+..|.
T Consensus 132 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~ 176 (319)
T 4b8w_A 132 NGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPH 176 (319)
T ss_dssp BSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTT
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCC
Confidence 1122269999999999999998884 8999999999887654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.2e-20 Score=148.36 Aligned_cols=142 Identities=22% Similarity=0.236 Sum_probs=113.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.|+||||||+|+||++++++|+++|++|++++|+ .+|++|.+++.++++.. .+
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------~~ 64 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------KP 64 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------CC
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------CC
Confidence 5799999999999999999999999999999986 27999999988887754 57
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC-----------CCc
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG-----------SGS 165 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~-----------~~~ 165 (218)
|+|||+||.... +.+.+++.+.+++|+.++.++++++.+ .+. +||++||.+.+.+.. +..
T Consensus 65 d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~ 135 (292)
T 1vl0_A 65 NVVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNPQS 135 (292)
T ss_dssp SEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCS
T ss_pred CEEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCCcc
Confidence 999999996321 223467889999999999999999854 333 999999976543322 357
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeeccccc
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
.|+.+|.+.+.+++.++. +++.++|+.+.
T Consensus 136 ~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~ 164 (292)
T 1vl0_A 136 AYGKTKLEGENFVKALNP-------KYYIVRTAWLY 164 (292)
T ss_dssp HHHHHHHHHHHHHHHHCS-------SEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHhhCC-------CeEEEeeeeee
Confidence 899999999999988754 35556665554
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=161.72 Aligned_cols=165 Identities=12% Similarity=0.073 Sum_probs=126.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHH-HHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ-REKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~~ 92 (218)
+++|+||||||+|+||++++++|+++ |++|++++|+.+..... . ....+..+.+|+++.++ ++++++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~v~~Dl~d~~~~~~~~~~------ 381 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L-NHPHFHFVEGDISIHSEWIEYHVK------ 381 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T-TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c-cCCceEEEECCCCCcHHHHHHhhc------
Confidence 46789999999999999999999998 89999999987653221 1 12357888999998765 554443
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-----------
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV----------- 161 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~----------- 161 (218)
.+|+|||+||..... ...+++.+.+++|+.++.++++++. +.+ .+||++||...+...
T Consensus 382 --~~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~----~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~ 450 (660)
T 1z7e_A 382 --KCDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSN 450 (660)
T ss_dssp --HCSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCSSSBCTTTCC
T ss_pred --CCCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHH----HhC-CEEEEEecHHHcCCCCCcccCCCccc
Confidence 369999999964321 1234577899999999999999884 334 799999997554221
Q ss_pred -------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 -------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 -------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.....|+.+|.+.+.+++.++++. |++++.++||.+.+|.
T Consensus 451 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~ 497 (660)
T 1z7e_A 451 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPR 497 (660)
T ss_dssp EEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTT
T ss_pred cccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCC
Confidence 122379999999999999998874 8999999999997765
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=144.98 Aligned_cols=152 Identities=18% Similarity=0.120 Sum_probs=117.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+++||||+|+||++++++|++ |++|++++|+.+.. .+ +.+|++|.++++++++.. ++|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---------~~-----~~~Dl~~~~~~~~~~~~~------~~d 59 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---------GG-----YKLDLTDFPRLEDFIIKK------RPD 59 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---------TC-----EECCTTSHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---------CC-----ceeccCCHHHHHHHHHhc------CCC
Confidence 3689999999999999999995 89999999987421 11 679999999998888764 579
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCC----------CCchh
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVG----------SGSIY 167 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~----------~~~~Y 167 (218)
+|||+||.... +.+.+++++.+++|+.++.++++++. +.+ ++||++||...+.+.+ +...|
T Consensus 60 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y 130 (273)
T 2ggs_A 60 VIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGK----VID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYY 130 (273)
T ss_dssp EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHH
T ss_pred EEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHH----HhC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHH
Confidence 99999996421 22346788999999999999999984 334 4999999987664432 35789
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+.+|.+++.+++. +....+|++.|. | ++++..
T Consensus 131 ~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~ 162 (273)
T 2ggs_A 131 GLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPI 162 (273)
T ss_dssp HHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHH
T ss_pred HHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHH
Confidence 9999999999877 333456776666 4 455443
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.5e-19 Score=145.21 Aligned_cols=146 Identities=15% Similarity=0.125 Sum_probs=115.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|+||++++++|+ +|++|++++|+.. .+.+|++|.+++.++++.. ++|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d 56 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPD 56 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCS
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCC
Confidence 369999999999999999999 8999999999762 2468999999988887753 579
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-----------CCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-----------GSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-----------~~~~~ 166 (218)
+|||+||..... .+.+++.+.+++|+.++.++++++. +.+ .++|++||...+.+. .....
T Consensus 57 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~ 127 (299)
T 1n2s_A 57 VIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAAN----ETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNV 127 (299)
T ss_dssp EEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHT----TTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred EEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccH
Confidence 999999964211 1223467789999999999999883 334 389999997654322 22578
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
|+.+|.+.+.+++.++. +++.++||.+..|
T Consensus 128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~ 157 (299)
T 1n2s_A 128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAG 157 (299)
T ss_dssp HHHHHHHHHHHHHHHCS-------SEEEEEECSEECS
T ss_pred HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCC
Confidence 99999999999877642 7899999998765
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=3.4e-19 Score=143.69 Aligned_cols=142 Identities=18% Similarity=0.207 Sum_probs=113.7
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+||||||+|+||++++++|+++|++|++++|. ++|++|.+++.++++.. .+|+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d~ 59 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPHI 59 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCCE
Confidence 89999999999999999999999999999992 37999999998888765 5799
Q ss_pred EEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCchh
Q 027816 99 LVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSIY 167 (218)
Q Consensus 99 vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~Y 167 (218)
|||+||..... ...+++.+.+++|+.++.++++++.+ .+ .+||++||...+.+ ..+...|
T Consensus 60 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y 130 (287)
T 3sc6_A 60 IIHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIY 130 (287)
T ss_dssp EEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred EEECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence 99999974321 11245788899999999999999843 33 37999999765432 2345789
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+.+|.+.+.+++.++. +++.++|+.+..|
T Consensus 131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~ 159 (287)
T 3sc6_A 131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGK 159 (287)
T ss_dssp HHHHHHHHHHHHHHCS-------SEEEEEECSEECS
T ss_pred HHHHHHHHHHHHHhCC-------CcEEEeeeeecCC
Confidence 9999999999887644 4578888887554
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=139.73 Aligned_cols=145 Identities=16% Similarity=0.105 Sum_probs=114.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhC--CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
|+|+||||+|+||++++++|+++ |++|++++|+.+...... . ..+..+.+|++|.+++.++++ .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~--------~ 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA--------G 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT--------T
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh--------c
Confidence 57999999999999999999999 999999999876654332 1 136678899999998877654 3
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
+|+|||+|+.. . . + ++|+.++.++++++ ++.+.++||++||..... ...+|+.+|.+.+
T Consensus 67 ~d~vi~~a~~~----~---~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E 125 (287)
T 2jl1_A 67 VSKLLFISGPH----Y---D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE---SIIPLAHVHLATE 125 (287)
T ss_dssp CSEEEECCCCC----S---C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred CCEEEEcCCCC----c---C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence 69999999852 1 1 1 57888998888887 445567999999986642 2358999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+++. .|++++.++||++.++.
T Consensus 126 ~~~~~-------~~~~~~ilrp~~~~~~~ 147 (287)
T 2jl1_A 126 YAIRT-------TNIPYTFLRNALYTDFF 147 (287)
T ss_dssp HHHHH-------TTCCEEEEEECCBHHHH
T ss_pred HHHHH-------cCCCeEEEECCEecccc
Confidence 98752 58999999999987665
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.5e-19 Score=144.56 Aligned_cols=151 Identities=15% Similarity=0.108 Sum_probs=115.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++|+||||| +|+||++++++|+++|++|++++|+.+.. ...+..+.+|++|.+++.++++ ++
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~ 63 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LR 63 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GC
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CC
Confidence 467899999 59999999999999999999999987652 1347778999999988776654 36
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCC
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSG 164 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~ 164 (218)
+|+|||+||.. .+++.+.+++|+.++.++++++ .+.+.++||++||...+.. ..+.
T Consensus 64 ~d~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~ 130 (286)
T 3gpi_A 64 PEILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK 130 (286)
T ss_dssp CSEEEECHHHH---------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC
T ss_pred CCEEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC
Confidence 89999999852 2445677899999999999988 3455679999999754332 2235
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
..|+.+|.+.+.+ +.. ++++.++|+.+..|...
T Consensus 131 ~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~ 163 (286)
T 3gpi_A 131 DFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRL 163 (286)
T ss_dssp SHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBC
T ss_pred ChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCch
Confidence 7899999999888 432 88999999988776543
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-18 Score=148.46 Aligned_cols=163 Identities=13% Similarity=0.061 Sum_probs=121.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhH---HHHHHHhh---------hCCCeEEEEEeeCCCHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL---NKCLKEWQ---------SKGFVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~---~~~~~~~~---------~~~~~v~~~~~D~~~~~~~~~~ 84 (218)
.|+||||||+|+||++++++|.++|++|++++|+.... ....+.+. .....+..+.+|+++.+.+.
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-- 227 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-- 227 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence 47999999999999999999999999999999987632 22222211 12356889999999988766
Q ss_pred HHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCc--cC---
Q 027816 85 IQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG--LS--- 159 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~--~~--- 159 (218)
.. ..+|+|||+|+... ...++.+.+++|+.++.++++++.. +..++|++||.+. ..
T Consensus 228 ------~~-~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~ 288 (508)
T 4f6l_B 228 ------LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDID 288 (508)
T ss_dssp ------CS-SCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTT
T ss_pred ------Cc-cCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccC
Confidence 22 57999999999642 1234567788999999999998843 3468999999776 10
Q ss_pred -------------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 160 -------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 160 -------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+......|+.+|.+.+.+++.++. .|++++.++||.|..+.
T Consensus 289 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~ 342 (508)
T 4f6l_B 289 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPY 342 (508)
T ss_dssp CSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCS
T ss_pred CcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCC
Confidence 012467899999999999988653 59999999999886653
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-19 Score=144.70 Aligned_cols=160 Identities=16% Similarity=0.102 Sum_probs=111.7
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh--CCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+.+|+||||||+|+||++++++|+++|++|++++|+........+.+.. ....+..+.+|++
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------- 68 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------- 68 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence 4578999999999999999999999999999999976521000000000 0112333344433
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------C
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------V 161 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~ 161 (218)
.+|+|||+|+........ ++....++ |+.++.++++++. +.+..+||++||...+.. .
T Consensus 69 --~~d~vi~~a~~~~~~~~~----~~~~~~~~-n~~~~~~ll~a~~----~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~ 137 (321)
T 3vps_A 69 --DVRLVYHLASHKSVPRSF----KQPLDYLD-NVDSGRHLLALCT----SVGVPKVVVGSTCEVYGQADTLPTPEDSPL 137 (321)
T ss_dssp --TEEEEEECCCCCCHHHHT----TSTTTTHH-HHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred --cCCEEEECCccCChHHHH----hCHHHHHH-HHHHHHHHHHHHH----HcCCCeEEEecCHHHhCCCCCCCCCCCCCC
Confidence 579999999965321111 11233456 9999999999884 344579999999764432 2
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccCCe-EEEEeecccccChh
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKDNI-RTNSVAPWYTKTSL 204 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv-~v~~v~PG~v~t~~ 204 (218)
.....|+.+|.+.+.+++.++.+ .|+ +++.++|+.+..|.
T Consensus 138 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~ 178 (321)
T 3vps_A 138 SPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPG 178 (321)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTT
T ss_pred CCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcC
Confidence 23578999999999999999887 588 99999999887664
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=134.56 Aligned_cols=143 Identities=13% Similarity=0.126 Sum_probs=107.8
Q ss_pred EEEEecCCCchHHHHHHHHHhC--CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 19 TALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+||||+|+||++++++|+++ |++|++++|+.+..+... .. .+..+.+|++|.+++.++++ .+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~~--~~~~~~~D~~d~~~~~~~~~--------~~ 66 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----AQ--GITVRQADYGDEAALTSALQ--------GV 66 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----HT--TCEEEECCTTCHHHHHHHTT--------TC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----cC--CCeEEEcCCCCHHHHHHHHh--------CC
Confidence 3799999999999999999998 999999999876544322 11 36678899999988777654 36
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|+|||+|+... ..|+.++.++++++ .+.+.++||++||.... +...+|+.+|.+.+.
T Consensus 67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~ 123 (286)
T 2zcu_A 67 EKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD---TSPLGLADEHIETEK 123 (286)
T ss_dssp SEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT---TCCSTTHHHHHHHHH
T ss_pred CEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC---CCcchhHHHHHHHHH
Confidence 99999998421 13677777777766 44456799999998765 233589999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
+++. .|++++.++||++.+++.
T Consensus 124 ~~~~-------~~~~~~ilrp~~~~~~~~ 145 (286)
T 2zcu_A 124 MLAD-------SGIVYTLLRNGWYSENYL 145 (286)
T ss_dssp HHHH-------HCSEEEEEEECCBHHHHH
T ss_pred HHHH-------cCCCeEEEeChHHhhhhH
Confidence 8753 489999999999887653
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.9e-17 Score=136.62 Aligned_cols=151 Identities=15% Similarity=0.052 Sum_probs=112.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEee-CCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD-AASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-~~~~~~~~~~~~~~~~~~~~ 94 (218)
.+|+|+||||+|+||++++++|+++|++|++++|+.+... .+.+.. ...+..+.+| ++|.+++.++++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------- 72 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------- 72 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT--------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh--------
Confidence 4678999999999999999999999999999999876542 122222 1247778999 999999877664
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCC-ccCcCCCCchhhhhHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVG-GLSHVGSGSIYGATKA 172 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~-~~~~~~~~~~Y~~sK~ 172 (218)
.+|+|||+++... . +.|..+ .++++++ ++.+ .++||++||.. +..+.+...+|+.+|.
T Consensus 73 ~~d~Vi~~a~~~~------~---------~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~ 132 (352)
T 1xgk_A 73 GAHLAFINTTSQA------G---------DEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF 132 (352)
T ss_dssp TCSEEEECCCSTT------S---------CHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred cCCEEEEcCCCCC------c---------HHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCCCCCccHHHHHH
Confidence 3699999987421 0 124444 5555554 4555 57999999986 3444455688999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+++.+++. .|++++.|+||++-+..
T Consensus 133 ~~E~~~~~-------~gi~~~ivrpg~~g~~~ 157 (352)
T 1xgk_A 133 TVENYVRQ-------LGLPSTFVYAGIYNNNF 157 (352)
T ss_dssp HHHHHHHT-------SSSCEEEEEECEEGGGC
T ss_pred HHHHHHHH-------cCCCEEEEecceecCCc
Confidence 99998865 28999999999875543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=133.98 Aligned_cols=155 Identities=15% Similarity=0.026 Sum_probs=112.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|+|+||||+|+||++++++|+++| ++|++++|+.+.... +.+... .+..+.+|++|.+++.++++ .
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~--~~~~~~~D~~d~~~l~~~~~--------~ 72 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ--GAEVVQGDQDDQVIMELALN--------G 72 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHT--TCEEEECCTTCHHHHHHHHT--------T
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHC--CCEEEEecCCCHHHHHHHHh--------c
Confidence 5799999999999999999999999 999999998765421 122222 36778899999999877765 3
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC--cCCCCchhhhhHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--HVGSGSIYGATKAA 173 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--~~~~~~~Y~~sK~a 173 (218)
+|+|||+++..... ..+.|+.+..++++++ ++.+.++||++|+..... ......+|+.+|.+
T Consensus 73 ~d~vi~~a~~~~~~------------~~~~~~~~~~~~~~aa----~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~ 136 (299)
T 2wm3_A 73 AYATFIVTNYWESC------------SQEQEVKQGKLLADLA----RRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGE 136 (299)
T ss_dssp CSEEEECCCHHHHT------------CHHHHHHHHHHHHHHH----HHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHHH
T ss_pred CCEEEEeCCCCccc------------cchHHHHHHHHHHHHH----HHcCCCEEEEEcCccccccCCCcccCchhhHHHH
Confidence 79999999842110 1234555665555554 555667899966543221 11224789999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
++.+.+. .|++++.|+||++.+++..
T Consensus 137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~ 162 (299)
T 2wm3_A 137 VEEYFRD-------IGVPMTSVRLPCYFENLLS 162 (299)
T ss_dssp HHHHHHH-------HTCCEEEEECCEEGGGGGT
T ss_pred HHHHHHH-------CCCCEEEEeecHHhhhchh
Confidence 9988764 3899999999999888654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-16 Score=129.80 Aligned_cols=150 Identities=19% Similarity=0.130 Sum_probs=110.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh----hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE----VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+..|+|+||||+|+||++++++|+++|++|++++|+. ++.. ..+.+... .+..+.+|++|.+++.+++++.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~~--~v~~~~~Dl~d~~~l~~~~~~~-- 82 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALEDK--GAIIVYGLINEQEAMEKILKEH-- 82 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHHT--TCEEEECCTTCHHHHHHHHHHT--
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHhC--CcEEEEeecCCHHHHHHHHhhC--
Confidence 4467899999999999999999999999999999976 2222 22233332 4777899999999988887753
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccC----cCCCCc
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS----HVGSGS 165 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~----~~~~~~ 165 (218)
.+|+|||+++. .|+.++.++++++ ++.+ ..+||+ |+..... +.+...
T Consensus 83 ----~~d~Vi~~a~~-------------------~n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p~~ 134 (346)
T 3i6i_A 83 ----EIDIVVSTVGG-------------------ESILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEPGL 134 (346)
T ss_dssp ----TCCEEEECCCG-------------------GGGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTTHH
T ss_pred ----CCCEEEECCch-------------------hhHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCCcc
Confidence 57999999985 2888888888887 3444 556765 4332211 224557
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.|+.+|.+++.+.+. .|++++.|+||++....
T Consensus 135 ~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~ 166 (346)
T 3i6i_A 135 NMYREKRRVRQLVEE-------SGIPFTYICCNSIASWP 166 (346)
T ss_dssp HHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCC
T ss_pred hHHHHHHHHHHHHHH-------cCCCEEEEEeccccccc
Confidence 899999998887754 58999999999887643
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.70 E-value=5.9e-17 Score=135.24 Aligned_cols=135 Identities=18% Similarity=0.193 Sum_probs=109.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
++||||||+|+||++++++|+++|+ +|+.++|+ ++.++++++++ .+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~ 47 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KA 47 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cC
Confidence 4799999999999999999999998 88877765 56777777766 36
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCC-eEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~-~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|+|||+||..... ++.+.+++|+.++.++++++ ++.+.. ++|++||..... ..+|+.+|.+.+
T Consensus 48 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E 111 (369)
T 3st7_A 48 DFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGE 111 (369)
T ss_dssp SEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred CEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence 9999999975422 23445778999999999987 444444 899999987554 689999999999
Q ss_pred HHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 176 QLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 176 ~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+++.++++. |++++.++|+.+..+.
T Consensus 112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~ 137 (369)
T 3st7_A 112 QLLREYAEEY---GNTVYIYRWPNLFGKW 137 (369)
T ss_dssp HHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred HHHHHHHHHh---CCCEEEEECCceeCCC
Confidence 9999999884 7999999999887653
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-16 Score=126.05 Aligned_cols=146 Identities=17% Similarity=0.185 Sum_probs=105.3
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-------hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-------VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
+|+|+||||+|+||++++++|+++|++|++++|+. ++.+. .+.+... .+..+.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~~--~v~~v~~D~~d~~~l~~~~~--- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQSL--GVILLEGDINDHETLVKAIK--- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHHT--TCEEEECCTTCHHHHHHHHT---
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHhC--CCEEEEeCCCCHHHHHHHHh---
Confidence 46899999999999999999999999999999986 33332 2233232 36778999999998877765
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccC------cCC
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS------HVG 162 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~------~~~ 162 (218)
.+|+|||+++... +.+..++++++ ++.+ ..+||. |..+.. ..+
T Consensus 76 -----~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p 125 (307)
T 2gas_A 76 -----QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGNVKKFFP--SEFGLDVDRHDAVEP 125 (307)
T ss_dssp -----TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCCCSEEEC--SCCSSCTTSCCCCTT
T ss_pred -----CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCCceEEee--cccccCcccccCCCc
Confidence 3799999998532 34555566655 4444 567773 433321 122
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
....| .+|.+++.+.+. .|++++.|+||++.+++..
T Consensus 126 ~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~ 161 (307)
T 2gas_A 126 VRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLR 161 (307)
T ss_dssp HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGG
T ss_pred chhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccc
Confidence 24578 999999887752 3799999999999887654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.69 E-value=3.1e-16 Score=126.47 Aligned_cols=148 Identities=16% Similarity=0.068 Sum_probs=105.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
++||||||+|+||++++++|+++ |++|++++|+.++.... . ...+..+.+|++|.+++.++++ .+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~--~~~v~~~~~D~~d~~~l~~~~~--------~~ 66 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W--RGKVSVRQLDYFNQESMVEAFK--------GM 66 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G--BTTBEEEECCTTCHHHHHHHTT--------TC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h--hCCCEEEEcCCCCHHHHHHHHh--------CC
Confidence 36899999999999999999998 89999999988764321 1 1347888999999998877664 46
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|+|||+||.... . ..|+.++.++++++ ++.+.++||++||...... .+|..++...
T Consensus 67 d~vi~~a~~~~~-------~-------~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~----~~~~~~~~~~-- 122 (289)
T 3e48_A 67 DTVVFIPSIIHP-------S-------FKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHN----NPFHMSPYFG-- 122 (289)
T ss_dssp SEEEECCCCCCS-------H-------HHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTT----CCSTTHHHHH--
T ss_pred CEEEEeCCCCcc-------c-------hhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCC----CCCccchhHH--
Confidence 999999985321 1 23566666666655 6666679999999653322 3344444221
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+. ...+...|++++.++||++.+++..
T Consensus 123 ~~---e~~~~~~g~~~~ilrp~~~~~~~~~ 149 (289)
T 3e48_A 123 YA---SRLLSTSGIDYTYVRMAMYMDPLKP 149 (289)
T ss_dssp HH---HHHHHHHCCEEEEEEECEESTTHHH
T ss_pred HH---HHHHHHcCCCEEEEeccccccccHH
Confidence 22 2233346899999999999998764
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=132.41 Aligned_cols=157 Identities=13% Similarity=0.096 Sum_probs=111.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCC-----CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLG-----AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+|+||||||+|+||++++++|+++| ++|++++|+..... . ....+..+.+|++|.+++.++++..
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~--~~~~~~~~~~Dl~d~~~~~~~~~~~--- 70 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H--EDNPINYVQCDISDPDDSQAKLSPL--- 70 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C--CSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c--ccCceEEEEeecCCHHHHHHHHhcC---
Confidence 4789999999999999999999999 99999999765432 1 1235778899999999887776532
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEE-------EEecCCccCc----
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIV-------FISSVGGLSH---- 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv-------~~ss~~~~~~---- 160 (218)
+++|+|||+||... +++.+.+++|+.++.++++++.+.. .+..++| ++||...+..
T Consensus 71 --~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~ 137 (364)
T 2v6g_A 71 --TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESH 137 (364)
T ss_dssp --TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred --CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccC
Confidence 24899999999642 2356788999999999999985431 1345676 6777543211
Q ss_pred ----------CCCCchhhhhHHHHHHHHHHHHHHhccCC-eEEEEeecccccCh
Q 027816 161 ----------VGSGSIYGATKAAMNQLTRNLACEWAKDN-IRTNSVAPWYTKTS 203 (218)
Q Consensus 161 ----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~g-v~v~~v~PG~v~t~ 203 (218)
.+....| .+.+.+++.++++ .| ++++.++|+.+..|
T Consensus 138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~ 184 (364)
T 2v6g_A 138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEVEK---KEGLTWSVHRPGNIFGF 184 (364)
T ss_dssp CSSBCTTSCCCSSCCHH----HHHHHHHHHHHTT---STTCEEEEEEESSEECC
T ss_pred CCCCCccccCCccchhh----HHHHHHHHHHhhc---CCCceEEEECCCceeCC
Confidence 0113356 2345555444433 45 99999999988664
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-15 Score=123.43 Aligned_cols=149 Identities=14% Similarity=0.186 Sum_probs=107.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-----hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-----ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.|+|+||||+|+||++++++|+++|++|++++|+.. +.+ ..+.+.. ..+..+.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~--~~~~~~~~D~~d~~~l~~~~~----- 75 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQ-MLLYFKQ--LGAKLIEASLDDHQRLVDALK----- 75 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHH-HHHHHHT--TTCEEECCCSSCHHHHHHHHT-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHH-HHHHHHh--CCeEEEeCCCCCHHHHHHHHh-----
Confidence 468999999999999999999999999999999842 222 2222322 246778999999998877765
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccC-c------CCC
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLS-H------VGS 163 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~-~------~~~ 163 (218)
.+|+|||+++..... .|+.+..++++++ ++.+ ..+||+ | ..+.. . .+.
T Consensus 76 ---~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S-~~g~~~~~~~~~~~p~ 131 (313)
T 1qyd_A 76 ---QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-S-EFGMDPDIMEHALQPG 131 (313)
T ss_dssp ---TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-S-CCSSCTTSCCCCCSST
T ss_pred ---CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-c-CCcCCccccccCCCCC
Confidence 379999999864321 2677777777766 5555 568875 3 33321 1 133
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
...| .+|.+++.+.+ + .|++++.++||++..++.
T Consensus 132 ~~~y-~sK~~~e~~~~----~---~g~~~~ilrp~~~~~~~~ 165 (313)
T 1qyd_A 132 SITF-IDKRKVRRAIE----A---ASIPYTYVSSNMFAGYFA 165 (313)
T ss_dssp THHH-HHHHHHHHHHH----H---TTCCBCEEECCEEHHHHT
T ss_pred cchH-HHHHHHHHHHH----h---cCCCeEEEEeceeccccc
Confidence 5678 99999988764 2 589999999998876544
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.5e-15 Score=122.10 Aligned_cols=140 Identities=12% Similarity=0.026 Sum_probs=103.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+|||||| |+||++++++|+++|++|++++|+.+....... ..+..+.+|++|.+ + ..+|
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~d 65 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGVT 65 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTCC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCCC
Confidence 68999998 999999999999999999999999877654332 24788899999832 2 4689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh--CCCCeEEEEecCCccCc-----------CCCC
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA--SGVGSIVFISSVGGLSH-----------VGSG 164 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~--~~~~~iv~~ss~~~~~~-----------~~~~ 164 (218)
+|||+|+..... . .. ..++++++ ++ .+..+||++||...+.. ....
T Consensus 66 ~vi~~a~~~~~~-----~--~~----------~~~l~~a~----~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~ 124 (286)
T 3ius_A 66 HLLISTAPDSGG-----D--PV----------LAALGDQI----AARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT 124 (286)
T ss_dssp EEEECCCCBTTB-----C--HH----------HHHHHHHH----HHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred EEEECCCccccc-----c--HH----------HHHHHHHH----HhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence 999999964321 1 11 12233333 44 34579999999754322 2234
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
..|+.+|.+.+.+++.+ .|++++.++||.+..|.
T Consensus 125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~ 158 (286)
T 3ius_A 125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPG 158 (286)
T ss_dssp SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTT
T ss_pred CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCC
Confidence 67999999999998776 68999999999997764
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=133.32 Aligned_cols=154 Identities=17% Similarity=0.173 Sum_probs=112.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|+||||||+|+||++++++|+++|++|++++|+.+..+ .+.+|+.+.. .+.+ ..+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~~---------~~~l-~~~ 202 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNPA---------SDLL-DGA 202 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSCC---------TTTT-TTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccchh---------HHhc-CCC
Confidence 679999999999999999999999999999999876421 1456765321 2222 368
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-c----------CCCCc
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-H----------VGSGS 165 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~----------~~~~~ 165 (218)
|+|||+||..... ..+.+.+...+++|+.++.++++++. .+.+..+||++||...+. . .....
T Consensus 203 D~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~ 276 (516)
T 3oh8_A 203 DVLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDD 276 (516)
T ss_dssp SEEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred CEEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence 9999999974322 34456678889999999999999743 344557999999965443 0 12446
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.|+.+|...+.+.+. ....|++++.++||.+..|.
T Consensus 277 ~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~ 311 (516)
T 3oh8_A 277 FLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGR 311 (516)
T ss_dssp HHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTT
T ss_pred hHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCC
Confidence 788888877766443 23469999999999998863
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.8e-15 Score=122.56 Aligned_cols=148 Identities=15% Similarity=0.156 Sum_probs=104.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-h----hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-V----ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~----~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.|+|+||||+|+||++++++|+++|++|++++|+. . ...+..+.+... .+..+.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~--~v~~v~~D~~d~~~l~~a~~----- 76 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSM--GVTIIEGEMEEHEKMVSVLK----- 76 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHT--TCEEEECCTTCHHHHHHHHT-----
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcC--CcEEEEecCCCHHHHHHHHc-----
Confidence 46799999999999999999999999999999986 1 222222223222 36778999999998877765
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCc---C---CCC
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSH---V---GSG 164 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~---~---~~~ 164 (218)
.+|+|||+++... +.+..++++++ .+.+ ..+|| .|..+... . +..
T Consensus 77 ---~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~~~~~~~~p~~ 128 (321)
T 3c1o_A 77 ---QVDIVISALPFPM-------------------ISSQIHIINAI----KAAGNIKRFL--PSDFGCEEDRIKPLPPFE 128 (321)
T ss_dssp ---TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCCEEE--CSCCSSCGGGCCCCHHHH
T ss_pred ---CCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCCccEEe--ccccccCccccccCCCcc
Confidence 3799999998531 44555555555 4444 56777 34433211 1 113
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
..| .+|.+++.+.+. .|++++.|+||++..+....
T Consensus 129 ~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~ 163 (321)
T 3c1o_A 129 SVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNY 163 (321)
T ss_dssp HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHH
T ss_pred hHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccc
Confidence 578 999999988752 37889999999988776544
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=2.9e-15 Score=122.36 Aligned_cols=147 Identities=16% Similarity=0.192 Sum_probs=103.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+|+||||+|+||++++++|+++|++|++++|+.+...+..+.+... .+..+.+|++|.+++.++++ .+|
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~~--------~~d 81 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL--GAIIVKGELDEHEKLVELMK--------KVD 81 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT--TCEEEECCTTCHHHHHHHHT--------TCS
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC--CCEEEEecCCCHHHHHHHHc--------CCC
Confidence 57999999999999999999999999999999875222222223232 36778999999999877765 379
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCc---C---CCCchhhhh
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSH---V---GSGSIYGAT 170 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~---~---~~~~~Y~~s 170 (218)
+|||+++... +.+..++++++ ++.+ ..+||+ | ..+... . +....| .+
T Consensus 82 ~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S-~~g~~~~~~~~~~p~~~~y-~s 135 (318)
T 2r6j_A 82 VVISALAFPQ-------------------ILDQFKILEAI----KVAGNIKRFLP-S-DFGVEEDRINALPPFEALI-ER 135 (318)
T ss_dssp EEEECCCGGG-------------------STTHHHHHHHH----HHHCCCCEEEC-S-CCSSCTTTCCCCHHHHHHH-HH
T ss_pred EEEECCchhh-------------------hHHHHHHHHHH----HhcCCCCEEEe-e-ccccCcccccCCCCcchhH-HH
Confidence 9999998521 34455555555 4444 567774 3 333211 1 113468 99
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
|.+++.+.+. .|++++.++||++...+...
T Consensus 136 K~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~ 165 (318)
T 2r6j_A 136 KRMIRRAIEE-------ANIPYTYVSANCFASYFINY 165 (318)
T ss_dssp HHHHHHHHHH-------TTCCBEEEECCEEHHHHHHH
T ss_pred HHHHHHHHHh-------cCCCeEEEEcceehhhhhhh
Confidence 9998887653 47899999999887765544
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=6.3e-15 Score=119.64 Aligned_cols=146 Identities=16% Similarity=0.174 Sum_probs=102.3
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-----HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.|+|+||||+|+||++++++|+++|++|++++|+... ..+..+.+.. ..+..+.+|++|.+++.++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~----- 76 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK----- 76 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHc-----
Confidence 4689999999999999999999999999999997432 1122223322 236778999999999887776
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEecCCccCc------CCCC
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISSVGGLSH------VGSG 164 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~------~~~~ 164 (218)
.+|+|||+++... +.+..++++++ ++.+ ..+||. |+ .+... .+..
T Consensus 77 ---~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~ 128 (308)
T 1qyc_A 77 ---NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFP-SE-FGNDVDNVHAVEPAK 128 (308)
T ss_dssp ---TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEEC-SC-CSSCTTSCCCCTTHH
T ss_pred ---CCCEEEECCcchh-------------------hhhHHHHHHHH----HhcCCCceEee-cc-cccCccccccCCcch
Confidence 3699999998521 34455555555 4444 567773 43 33211 1223
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
..| .+|.+++.+.+. .|++++.++||++.+++.
T Consensus 129 ~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~ 161 (308)
T 1qyc_A 129 SVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFL 161 (308)
T ss_dssp HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHT
T ss_pred hHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccc
Confidence 568 999999887753 378999999998876544
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-12 Score=104.99 Aligned_cols=152 Identities=20% Similarity=0.196 Sum_probs=100.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|.||++++++|+++|++|+++.|++.. ..+. .| ++ . .+.+ ..+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~~---~~-----~~---~---~~~l-~~~d 53 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRIT---WD-----EL---A---ASGL-PSCD 53 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEEE---HH-----HH---H---HHCC-CSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Ceee---cc-----hh---h---Hhhc-cCCC
Confidence 469999999999999999999999999999997542 1121 11 11 0 1223 4689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~ 166 (218)
.|+|.|+.....+....+.+...+.++.|+.++.++++++.. ...+...+|+.||...+.. ......
T Consensus 54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~--~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~ 131 (298)
T 4b4o_A 54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITK--APQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDF 131 (298)
T ss_dssp EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSH
T ss_pred EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHH--hCCCceEEEEEeeeeeecCCCCCcccccCCccccch
Confidence 999999865444444567777788899999999888877632 1223345777777544322 112234
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
|+..|...+.. ......++++..+.||.+..|
T Consensus 132 ~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~ 163 (298)
T 4b4o_A 132 FSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGR 163 (298)
T ss_dssp HHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECT
T ss_pred hHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcC
Confidence 54444443321 223456899999999988765
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=4.3e-14 Score=114.27 Aligned_cols=110 Identities=20% Similarity=0.289 Sum_probs=80.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||+++||||+||||++++++|+++|++|++++|+.++.++..+++... ..+....+|+++.++++++++
T Consensus 115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------ 187 (287)
T 1lu9_A 115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK------ 187 (287)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT------
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH------
Confidence 4578999999999999999999999999999999999988887777666432 125567799999988766554
Q ss_pred CCcccEEEecCCCCCC-CCCCCCCH-HHHHHHHHhhhhhHH
Q 027816 93 NGKLNILVNNVGTNIR-KPTIEYSA-EEYSKIMTTNFESTY 131 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~-~~~~~~~~-~~~~~~~~~nv~~~~ 131 (218)
.+|+||||+|.... .+..+.+. ++|...+++|+.+.+
T Consensus 188 --~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 188 --GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp --TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred --hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 36999999986421 11111121 334446677777665
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.4e-12 Score=107.22 Aligned_cols=163 Identities=9% Similarity=0.056 Sum_probs=106.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-------eEEEecCCh--hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNE--VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
++|+||||+|+||++++..|+++|+ +|++.++.. +..+....++.+....+. .|+.+.+++.+.++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~---~di~~~~~~~~a~~-- 79 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL---AGLEATDDPKVAFK-- 79 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE---EEEEEESCHHHHTT--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc---CCeEeccChHHHhC--
Confidence 5799999999999999999999996 899999875 223333334433211121 34444333333332
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCc--------cC-
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG--------LS- 159 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~--------~~- 159 (218)
..|+|||.||..... ..+ ..+.++.|+.++..+++++..+= ....+++++|+... ..
T Consensus 80 ------~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~ 145 (327)
T 1y7t_A 80 ------DADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP 145 (327)
T ss_dssp ------TCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred ------CCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence 469999999975321 223 34678999999999999884320 13347777777431 11
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccC
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t 202 (218)
+.+...+|+.+|...+.+...+++.+ |+++..|+|..|.-
T Consensus 146 ~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G 185 (327)
T 1y7t_A 146 GLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWG 185 (327)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEB
T ss_pred CCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEc
Confidence 24455679999999999998888775 55555555554433
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.5e-10 Score=89.70 Aligned_cols=81 Identities=20% Similarity=0.172 Sum_probs=61.6
Q ss_pred ccCCcEEEEecC----------------CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC
Q 027816 14 SLKGMTALVTGG----------------TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77 (218)
Q Consensus 14 ~~~~k~vlItGa----------------~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 77 (218)
+++||++||||| +|+||.++|++|+++|++|++++++... + . ..+ + ..+|+++
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-----~-~~g--~--~~~dv~~ 73 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-----T-PPF--V--KRVDVMT 73 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-----C-CTT--E--EEEECCS
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-----c-CCC--C--eEEccCc
Confidence 578999999999 6899999999999999999998776521 1 0 111 1 3568777
Q ss_pred HHHHHHHHHHHHhhcCCcccEEEecCCCCCCC
Q 027816 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRK 109 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~ 109 (218)
.++ +++.+.+.+ +++|++|+|||+....
T Consensus 74 ~~~---~~~~v~~~~-~~~Dili~~Aav~d~~ 101 (226)
T 1u7z_A 74 ALE---MEAAVNASV-QQQNIFIGCAAVADYR 101 (226)
T ss_dssp HHH---HHHHHHHHG-GGCSEEEECCBCCSEE
T ss_pred HHH---HHHHHHHhc-CCCCEEEECCcccCCC
Confidence 554 667777777 6899999999986533
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=99.02 E-value=6e-11 Score=92.19 Aligned_cols=84 Identities=19% Similarity=0.264 Sum_probs=60.9
Q ss_pred CCcEEEEecC----------------CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHH
Q 027816 16 KGMTALVTGG----------------TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79 (218)
Q Consensus 16 ~~k~vlItGa----------------~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~ 79 (218)
+||+|||||| +|++|.++|++++++|++|++++|+..... .....+ ...|+ +
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~--~~~~v---~ 69 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNL--SIREI---T 69 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTE--EEEEC---C
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCe--EEEEH---h
Confidence 5899999999 788999999999999999999998754210 000112 23344 3
Q ss_pred HHHHHHHHHHhhcCCcccEEEecCCCCCCCCCC
Q 027816 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTI 112 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~ 112 (218)
+++++++.+.+.+ +.+|++|+|||+....+..
T Consensus 70 s~~em~~~v~~~~-~~~Dili~aAAvsD~~p~~ 101 (232)
T 2gk4_A 70 NTKDLLIEMQERV-QDYQVLIHSMAVSDYTPVY 101 (232)
T ss_dssp SHHHHHHHHHHHG-GGCSEEEECSBCCSEEEEE
T ss_pred HHHHHHHHHHHhc-CCCCEEEEcCccccccchh
Confidence 5666777777777 6899999999986544433
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.95 E-value=4.3e-09 Score=72.83 Aligned_cols=74 Identities=16% Similarity=0.116 Sum_probs=60.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.+++++|+|+ |++|+.+++.|.++| ++|++++|++++.+... . ..+....+|+++.+++.+.++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~-------- 68 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--MGVATKQVDAKDEAGLAKALG-------- 68 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--TTCEEEECCTTCHHHHHHHTT--------
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--CCCcEEEecCCCHHHHHHHHc--------
Confidence 3578999999 999999999999999 89999999988766543 1 235567899999887766543
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
.+|+||++++
T Consensus 69 ~~d~vi~~~~ 78 (118)
T 3ic5_A 69 GFDAVISAAP 78 (118)
T ss_dssp TCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 5799999986
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.3e-12 Score=108.29 Aligned_cols=45 Identities=20% Similarity=0.223 Sum_probs=39.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
..+.||+++|||++ +||+++|+.|...|++|+++++++....+..
T Consensus 261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa 305 (488)
T 3ond_A 261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT 305 (488)
T ss_dssp CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 45789999999987 9999999999999999999999987665543
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.3e-08 Score=84.40 Aligned_cols=81 Identities=22% Similarity=0.206 Sum_probs=68.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC---CeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG---AVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++|+|+|| |+||+++++.|+++| .+|++++|+.++.+...+.+... +..+..+.+|+++.+++++++++.
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence 47899999 899999999999998 38999999999988887776543 235778899999999999988865
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
++|+||++++.
T Consensus 76 -~~DvVin~ag~ 86 (405)
T 4ina_A 76 -KPQIVLNIALP 86 (405)
T ss_dssp -CCSEEEECSCG
T ss_pred -CCCEEEECCCc
Confidence 57999999884
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=9.4e-09 Score=75.50 Aligned_cols=78 Identities=15% Similarity=0.095 Sum_probs=63.3
Q ss_pred CCchHHHHHHHHHhCCCeEEEecCChhhHH---HHHHHhhhCCCeEEEEEeeCCCH--HHHHHHHHHHHhhcCCcccEEE
Q 027816 26 TRGIGQATVEELAGLGAVVHTCSRNEVELN---KCLKEWQSKGFVVSGSVCDAASP--DQREKLIQEVGSKFNGKLNILV 100 (218)
Q Consensus 26 ~~giG~~la~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~v~~~~~D~~~~--~~~~~~~~~~~~~~~~~id~vv 100 (218)
++-++.++++.|++.|++|++..|+.+... ...+.+...+..+..+++|+++. ++++++++.+.+.+ |+ |++|
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLV 102 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLV 102 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEE
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEE
Confidence 345789999999999999999888655432 12344455577888899999999 99999999999988 57 9999
Q ss_pred ecCCC
Q 027816 101 NNVGT 105 (218)
Q Consensus 101 ~~ag~ 105 (218)
||||.
T Consensus 103 nnAgg 107 (157)
T 3gxh_A 103 HCLAN 107 (157)
T ss_dssp ECSBS
T ss_pred ECCCC
Confidence 99995
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.67 E-value=5.4e-08 Score=83.18 Aligned_cols=77 Identities=13% Similarity=0.102 Sum_probs=61.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++|+|+|+| +|++|+++++.|++.|++|++++|+.++.+...+.+ ..+..+.+|+++.+++.++++ .
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~--------~ 68 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA--------K 68 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT--------T
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc--------C
Confidence 468899998 799999999999999999999999987665443222 236677899999888776653 4
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+|||+++.
T Consensus 69 ~DvVIn~a~~ 78 (450)
T 1ff9_A 69 HDLVISLIPY 78 (450)
T ss_dssp SSEEEECCC-
T ss_pred CcEEEECCcc
Confidence 7999999985
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.63 E-value=5.2e-08 Score=73.90 Aligned_cols=79 Identities=20% Similarity=0.299 Sum_probs=56.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+||||..+++.+...|++|++++|++++.+... + .+... .+|.++.+..+.+.+... ++.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~---~g~~~---~~d~~~~~~~~~~~~~~~---~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-R---LGVEY---VGDSRSVDFADEILELTD---GYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-T---TCCSE---EEETTCSTHHHHHHHHTT---TCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCCE---EeeCCcHHHHHHHHHHhC---CCC
Confidence 5789999999999999999999999999999999887655432 2 12221 257766554444433321 136
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|++++|+|
T Consensus 108 ~D~vi~~~g 116 (198)
T 1pqw_A 108 VDVVLNSLA 116 (198)
T ss_dssp EEEEEECCC
T ss_pred CeEEEECCc
Confidence 999999987
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1e-07 Score=78.21 Aligned_cols=79 Identities=16% Similarity=0.230 Sum_probs=59.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+||||..+++.+...|++|+++++++++++.. +++. .. ..+|.++.+++.+.+.+... +.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g---~~---~~~d~~~~~~~~~~~~~~~~---~~ 214 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIG---FD---AAFNYKTVNSLEEALKKASP---DG 214 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT---CS---EEEETTSCSCHHHHHHHHCT---TC
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcC---Cc---EEEecCCHHHHHHHHHHHhC---CC
Confidence 578999999999999999999999999999999998877655 4432 11 23577764455555554432 47
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|++|+|+|
T Consensus 215 ~d~vi~~~g 223 (333)
T 1v3u_A 215 YDCYFDNVG 223 (333)
T ss_dssp EEEEEESSC
T ss_pred CeEEEECCC
Confidence 999999998
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.62 E-value=2.2e-08 Score=80.72 Aligned_cols=82 Identities=17% Similarity=0.141 Sum_probs=59.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++++|+++|||++ |+|+++++.|+++| +|++++|+.++.++..+++.........+.+|+++. .+.+
T Consensus 124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~ 191 (287)
T 1nvt_A 124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL 191 (287)
T ss_dssp CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC
T ss_pred CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh
Confidence 35789999999997 99999999999999 999999999887777666543110000112344431 2334
Q ss_pred CCcccEEEecCCCCC
Q 027816 93 NGKLNILVNNVGTNI 107 (218)
Q Consensus 93 ~~~id~vv~~ag~~~ 107 (218)
+.+|+||+|+|...
T Consensus 192 -~~~DilVn~ag~~~ 205 (287)
T 1nvt_A 192 -DGVDIIINATPIGM 205 (287)
T ss_dssp -TTCCEEEECSCTTC
T ss_pred -CCCCEEEECCCCCC
Confidence 57899999998754
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.61 E-value=6.8e-09 Score=90.39 Aligned_cols=98 Identities=15% Similarity=0.202 Sum_probs=66.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++|||| ||+|+++++.|++.|++|++++|+.++.++..+.+.. .+ .++.+. +.++
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~---~~----~~~~dl-----------~~~~ 421 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG---KA----LSLTDL-----------DNYH 421 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC----C----EETTTT-----------TTC-
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC---ce----eeHHHh-----------hhcc
Confidence 467899999999 5999999999999999999999999888777666521 12 122221 1111
Q ss_pred -CcccEEEecCCCCCC-----CCCCCCCHHHHHHHHHhhhhhH
Q 027816 94 -GKLNILVNNVGTNIR-----KPTIEYSAEEYSKIMTTNFEST 130 (218)
Q Consensus 94 -~~id~vv~~ag~~~~-----~~~~~~~~~~~~~~~~~nv~~~ 130 (218)
+.+|++|+|+|.... .++.+...++|...+++|+.+.
T Consensus 422 ~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~ 464 (523)
T 2o7s_A 422 PEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR 464 (523)
T ss_dssp -CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred ccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence 358999999997532 3455566677777888998765
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.5e-07 Score=78.52 Aligned_cols=78 Identities=18% Similarity=0.215 Sum_probs=60.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++++++|+|+ |+||+.+++.+...|++|++++|+.++++...+.+. .. +.+|.++.+++++.+.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g---~~---~~~~~~~~~~l~~~~~------- 228 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG---GR---VITLTATEANIKKSVQ------- 228 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT---TS---EEEEECCHHHHHHHHH-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC---ce---EEEecCCHHHHHHHHh-------
Confidence 477899999999 999999999999999999999999887766544332 12 3467777777766553
Q ss_pred CcccEEEecCCCC
Q 027816 94 GKLNILVNNVGTN 106 (218)
Q Consensus 94 ~~id~vv~~ag~~ 106 (218)
..|+||++++..
T Consensus 229 -~~DvVi~~~g~~ 240 (369)
T 2eez_A 229 -HADLLIGAVLVP 240 (369)
T ss_dssp -HCSEEEECCC--
T ss_pred -CCCEEEECCCCC
Confidence 359999999853
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=7.5e-07 Score=72.47 Aligned_cols=85 Identities=20% Similarity=0.213 Sum_probs=63.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC---hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
..++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+ .++.+++.+++..... ......++.+.+++.+.+.
T Consensus 149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~- 225 (315)
T 3tnl_A 149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA- 225 (315)
T ss_dssp TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH-
T ss_pred CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc-
Confidence 35678999999998 7999999999999998 89999999 7777777777654321 2233456666665544332
Q ss_pred HHhhcCCcccEEEecCCCC
Q 027816 88 VGSKFNGKLNILVNNVGTN 106 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~ 106 (218)
..|+||++.+..
T Consensus 226 -------~aDiIINaTp~G 237 (315)
T 3tnl_A 226 -------ESVIFTNATGVG 237 (315)
T ss_dssp -------TCSEEEECSSTT
T ss_pred -------CCCEEEECccCC
Confidence 459999987653
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.49 E-value=3.9e-07 Score=78.13 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=61.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++|+|+|+|| |++|+++++.|+++ |++|.+++|+.++.+...+. ..+..+.+|+.+.+++.++++
T Consensus 19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~----- 87 (467)
T 2axq_A 19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA----- 87 (467)
T ss_dssp ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH-----
T ss_pred cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc-----
Confidence 4567889999998 99999999999998 67999999998877665432 124556789999888766654
Q ss_pred cCCcccEEEecCCCC
Q 027816 92 FNGKLNILVNNVGTN 106 (218)
Q Consensus 92 ~~~~id~vv~~ag~~ 106 (218)
.+|+||++++..
T Consensus 88 ---~~DvVIn~tp~~ 99 (467)
T 2axq_A 88 ---DNDVVISLIPYT 99 (467)
T ss_dssp ---TSSEEEECSCGG
T ss_pred ---CCCEEEECCchh
Confidence 469999998853
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.47 E-value=7.5e-07 Score=73.06 Aligned_cols=151 Identities=9% Similarity=0.047 Sum_probs=95.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-------eEEEecCC----hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRN----EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~ 85 (218)
.++|+||||+|.+|..++..|+.+|. +|++.+++ +++.+....++.+....+. .|+....+..+.+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al 81 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF 81 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh
Confidence 35899999999999999999999885 79999998 5555554555544211111 1332222222222
Q ss_pred HHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCc--------
Q 027816 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-------- 157 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~-------- 157 (218)
+ ..|+|||.||.... ...+.+ +.+..|+.....+++.+..+- .+...|+++|+-..
T Consensus 82 ~--------~aD~Vi~~ag~~~~---~g~~r~---dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~ 145 (329)
T 1b8p_A 82 K--------DADVALLVGARPRG---PGMERK---DLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMK 145 (329)
T ss_dssp T--------TCSEEEECCCCCCC---TTCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred C--------CCCEEEEeCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHH
Confidence 2 46999999996432 123333 457888888888887774320 13458888887331
Q ss_pred cC-cCCCCchhhhhHHHHHHHHHHHHHHhc
Q 027816 158 LS-HVGSGSIYGATKAAMNQLTRNLACEWA 186 (218)
Q Consensus 158 ~~-~~~~~~~Y~~sK~a~~~~~~~l~~e~~ 186 (218)
.. +.|....|+.++.--..+...++..+.
T Consensus 146 ~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg 175 (329)
T 1b8p_A 146 SAPSLPAKNFTAMLRLDHNRALSQIAAKTG 175 (329)
T ss_dssp TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred HcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence 11 334445688887666667777777764
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.43 E-value=9e-07 Score=70.59 Aligned_cols=78 Identities=17% Similarity=0.319 Sum_probs=58.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++.+.+.+++.... .+ ...|. +++ .+
T Consensus 115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~--~~~~~---~~~-------~~-- 178 (271)
T 1nyt_A 115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SI--QALSM---DEL-------EG-- 178 (271)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SE--EECCS---GGG-------TT--
T ss_pred cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Ce--eEecH---HHh-------cc--
Confidence 3567899999998 799999999999999999999999988887777664322 22 12332 221 11
Q ss_pred CCcccEEEecCCCCC
Q 027816 93 NGKLNILVNNVGTNI 107 (218)
Q Consensus 93 ~~~id~vv~~ag~~~ 107 (218)
+..|+||++++...
T Consensus 179 -~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 179 -HEFDLIINATSSGI 192 (271)
T ss_dssp -CCCSEEEECCSCGG
T ss_pred -CCCCEEEECCCCCC
Confidence 36899999998754
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.42 E-value=8.6e-07 Score=73.05 Aligned_cols=80 Identities=15% Similarity=0.138 Sum_probs=59.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|+||..++..+...|++|++++|++++.+.. +++ +.. ..+|.++.+++.+.+.++.+ +.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~---~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI---GGE---VFIDFTKEKDIVGAVLKATD---GG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT---TCC---EEEETTTCSCHHHHHHHHHT---SC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc---CCc---eEEecCccHhHHHHHHHHhC---CC
Confidence 578999999999999999999999999999999988776433 333 212 22477755566555555433 36
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|++|+++|.
T Consensus 239 ~D~vi~~~g~ 248 (347)
T 2hcy_A 239 AHGVINVSVS 248 (347)
T ss_dssp EEEEEECSSC
T ss_pred CCEEEECCCc
Confidence 8999999883
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.2e-06 Score=62.69 Aligned_cols=75 Identities=15% Similarity=0.230 Sum_probs=58.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++++++|+|+ |.+|+.+++.|.++|++|++++++++..+...+ .+ +..+..|.++.+.++++ .. ..
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~--~~~~~gd~~~~~~l~~~------~~-~~ 70 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG--FDAVIADPTDESFYRSL------DL-EG 70 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT--CEEEECCTTCHHHHHHS------CC-TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC--CcEEECCCCCHHHHHhC------Cc-cc
Confidence 3568999998 779999999999999999999999887665543 22 56678999998876553 11 36
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
.|+++.+.+
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 799998765
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.41 E-value=6.4e-06 Score=67.41 Aligned_cols=102 Identities=17% Similarity=0.241 Sum_probs=66.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCC--eEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++|+||||+|.+|..++..|+++| .+|++.+++++ +....++.+... .+.. ++...+..+.++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~------ 75 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT------ 75 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT------
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC------
Confidence 4589999999999999999999999 68999998776 222333433221 2222 122334433333
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHh
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~ 138 (218)
..|+||++||...... .+.+ ..+..|+.....+++.+.
T Consensus 76 --gaDvVi~~ag~~~~~g---~~r~---dl~~~N~~~~~~i~~~i~ 113 (326)
T 1smk_A 76 --GMDLIIVPAGVPRKPG---MTRD---DLFKINAGIVKTLCEGIA 113 (326)
T ss_dssp --TCSEEEECCCCCCCSS---CCCS---HHHHHHHHHHHHHHHHHH
T ss_pred --CCCEEEEcCCcCCCCC---CCHH---HHHHHHHHHHHHHHHHHH
Confidence 4699999999643221 1212 346788888888887764
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.1e-06 Score=71.86 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=58.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|+||..+++.+...|++|+++++++++++...+ +. .. ..+|.++.+..+++.+... +..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g---~~---~~~d~~~~~~~~~i~~~~~---~~~ 214 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LG---CH---HTINYSTQDFAEVVREITG---GKG 214 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT---CS---EEEETTTSCHHHHHHHHHT---TCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---CC---EEEECCCHHHHHHHHHHhC---CCC
Confidence 57899999999999999999999999999999999877665433 32 11 1246666554444433331 136
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|++|+|+|.
T Consensus 215 ~d~vi~~~g~ 224 (333)
T 1wly_A 215 VDVVYDSIGK 224 (333)
T ss_dssp EEEEEECSCT
T ss_pred CeEEEECCcH
Confidence 8999999983
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.39 E-value=8.7e-07 Score=72.36 Aligned_cols=79 Identities=20% Similarity=0.221 Sum_probs=57.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|+||..+++.+...|++|+++++++++++...+ +. ... .+|.++.+..+++.+.+. +..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g---~~~---~~~~~~~~~~~~~~~~~~---~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AG---AWQ---VINYREEDLVERLKEITG---GKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HT---CSE---EEETTTSCHHHHHHHHTT---TCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC---CCE---EEECCCccHHHHHHHHhC---CCC
Confidence 47899999999999999999999999999999999877665443 32 111 246666554444433321 136
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|++|+|+|
T Consensus 210 ~D~vi~~~g 218 (327)
T 1qor_A 210 VRVVYDSVG 218 (327)
T ss_dssp EEEEEECSC
T ss_pred ceEEEECCc
Confidence 899999998
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.4e-06 Score=71.97 Aligned_cols=80 Identities=16% Similarity=0.265 Sum_probs=57.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|+||..++..+...|++|+++++++++++.. +++. .. ..+|..+.+..+++.+.+ . ++.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g---~~---~~~~~~~~~~~~~~~~~~-~--~~~ 231 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG---AA---AGFNYKKEDFSEATLKFT-K--GAG 231 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT---CS---EEEETTTSCHHHHHHHHT-T--TSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC---Cc---EEEecCChHHHHHHHHHh-c--CCC
Confidence 478999999999999999999999999999999998877655 3332 11 125666544443333322 1 136
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|++|+|+|.
T Consensus 232 ~d~vi~~~G~ 241 (354)
T 2j8z_A 232 VNLILDCIGG 241 (354)
T ss_dssp EEEEEESSCG
T ss_pred ceEEEECCCc
Confidence 8999999983
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=4.3e-07 Score=64.73 Aligned_cols=77 Identities=21% Similarity=0.288 Sum_probs=55.7
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+++++++|+|+ |.+|+.+++.|.+.|++|++++++++..+.. ...+ ...+..|.++.+.+.++ .. .
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~--~~~~~~d~~~~~~l~~~------~~-~ 69 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSL------GI-R 69 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTC--SEEEECCTTCHHHHHTT------TG-G
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhC--CEEEEeCCCCHHHHHhc------CC-C
Confidence 45678999998 9999999999999999999999987665432 2222 34567888886655432 12 3
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
..|+++++++.
T Consensus 70 ~~d~vi~~~~~ 80 (144)
T 2hmt_A 70 NFEYVIVAIGA 80 (144)
T ss_dssp GCSEEEECCCS
T ss_pred CCCEEEECCCC
Confidence 67999999873
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.2e-06 Score=72.55 Aligned_cols=79 Identities=19% Similarity=0.208 Sum_probs=56.6
Q ss_pred CC--cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KG--MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~--k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.| ++++|+||+|+||..++..+...|+ +|+++++++++++...+++. .. ..+|.++.+..+. +.+. .
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g---~~---~~~d~~~~~~~~~-~~~~---~ 227 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG---FD---AAINYKKDNVAEQ-LRES---C 227 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC---CS---EEEETTTSCHHHH-HHHH---C
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---Cc---eEEecCchHHHHH-HHHh---c
Confidence 46 8999999999999999999999999 99999999877665543232 11 2356665333222 2222 2
Q ss_pred CCcccEEEecCC
Q 027816 93 NGKLNILVNNVG 104 (218)
Q Consensus 93 ~~~id~vv~~ag 104 (218)
++.+|++|+|+|
T Consensus 228 ~~~~d~vi~~~G 239 (357)
T 2zb4_A 228 PAGVDVYFDNVG 239 (357)
T ss_dssp TTCEEEEEESCC
T ss_pred CCCCCEEEECCC
Confidence 236899999998
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=1.4e-06 Score=71.40 Aligned_cols=79 Identities=18% Similarity=0.226 Sum_probs=57.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|+||..++..+...|++|+++++++++.+...+++. ... ..|.++.+..+.+.+ ..++.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g---~~~---~~~~~~~~~~~~~~~----~~~~~ 218 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELG---FDG---AIDYKNEDLAAGLKR----ECPKG 218 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---CSE---EEETTTSCHHHHHHH----HCTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC---CCE---EEECCCHHHHHHHHH----hcCCC
Confidence 57899999999999999999999999999999999887765534432 111 246655443333322 22357
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|++++|+|
T Consensus 219 ~d~vi~~~g 227 (336)
T 4b7c_A 219 IDVFFDNVG 227 (336)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999988
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.34 E-value=2e-06 Score=71.12 Aligned_cols=79 Identities=18% Similarity=0.255 Sum_probs=56.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|+||..++..+...|++|+++++++++++.. +++ +.. ..+|..+.+..+++.+.. . +..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~---~~~d~~~~~~~~~~~~~~-~--~~~ 239 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN---GAH---EVFNHREVNYIDKIKKYV-G--EKG 239 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSTTHHHHHHHHH-C--TTC
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc---CCC---EEEeCCCchHHHHHHHHc-C--CCC
Confidence 478999999999999999999999999999999998876633 333 212 125666654443333322 1 136
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|++|+|+|
T Consensus 240 ~D~vi~~~G 248 (351)
T 1yb5_A 240 IDIIIEMLA 248 (351)
T ss_dssp EEEEEESCH
T ss_pred cEEEEECCC
Confidence 999999988
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=8.6e-07 Score=72.91 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=58.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|+||..++..+...|++|+++++++++++...+++ +... .+|.++.+++.+.+.++. ++.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~~---~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRCF---PNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHHC---TTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHHh---CCC
Confidence 5789999999999999999999999999999999988766554333 2111 246665444444444442 246
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|++++++|
T Consensus 226 ~d~vi~~~g 234 (345)
T 2j3h_A 226 IDIYFENVG 234 (345)
T ss_dssp EEEEEESSC
T ss_pred CcEEEECCC
Confidence 899999988
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.27 E-value=5.5e-06 Score=66.42 Aligned_cols=82 Identities=16% Similarity=0.073 Sum_probs=58.8
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++......+.....+..+ +.+.+.
T Consensus 123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~----- 193 (283)
T 3jyo_A 123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA----- 193 (283)
T ss_dssp TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH-----
T ss_pred cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh-----
Confidence 3578999999998 7999999999999998 79999999999888877765432222222334323 222222
Q ss_pred cCCcccEEEecCCCC
Q 027816 92 FNGKLNILVNNVGTN 106 (218)
Q Consensus 92 ~~~~id~vv~~ag~~ 106 (218)
..|+||++....
T Consensus 194 ---~~DiVInaTp~G 205 (283)
T 3jyo_A 194 ---AADGVVNATPMG 205 (283)
T ss_dssp ---HSSEEEECSSTT
T ss_pred ---cCCEEEECCCCC
Confidence 349999987653
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-05 Score=65.20 Aligned_cols=85 Identities=18% Similarity=0.164 Sum_probs=59.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC---hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN---EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
..++++|+++|+|+ ||.|++++..|++.|+ +|.+++|+ .++.+++.+++..... ......+..+.+...+.+.
T Consensus 143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~-~~v~~~~~~~l~~~~~~l~- 219 (312)
T 3t4e_A 143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTD-CVVTVTDLADQHAFTEALA- 219 (312)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH-
T ss_pred CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccC-cceEEechHhhhhhHhhcc-
Confidence 35678999999998 8999999999999998 89999999 7777777776654321 1222345555433222222
Q ss_pred HHhhcCCcccEEEecCCCC
Q 027816 88 VGSKFNGKLNILVNNVGTN 106 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~ 106 (218)
..|+||++.+..
T Consensus 220 -------~~DiIINaTp~G 231 (312)
T 3t4e_A 220 -------SADILTNGTKVG 231 (312)
T ss_dssp -------HCSEEEECSSTT
T ss_pred -------CceEEEECCcCC
Confidence 359999987654
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.20 E-value=3.8e-05 Score=62.13 Aligned_cols=112 Identities=11% Similarity=-0.012 Sum_probs=70.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecC--ChhhHHHHHHHhhhC---CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSR--NEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++|+||||+|.+|..++..|+.+|. ++++.++ ++++++....++.+. ...+.... | +.+.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a---------- 67 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED---------- 67 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG----------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH----------
Confidence 3689999999999999999999885 6999998 766554434444332 11222221 2 1111
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS 154 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss 154 (218)
+ ...|+||+.||.... ...+.+ ..+..|+.....+++.+ .+..+..+|+++|
T Consensus 68 -~-~~aDvVi~~ag~~~~---~g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~S 119 (303)
T 1o6z_A 68 -T-AGSDVVVITAGIPRQ---PGQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTTS 119 (303)
T ss_dssp -G-TTCSEEEECCCCCCC---TTCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEECC
T ss_pred -h-CCCCEEEEcCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEeC
Confidence 1 357999999996421 122333 34788888888887776 4444444544443
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=5e-06 Score=66.29 Aligned_cols=78 Identities=13% Similarity=0.232 Sum_probs=57.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++.+++.+.+.... .+. ..|+ +++. +
T Consensus 115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~--~~~~---~~~~-------~-- 178 (272)
T 1p77_A 115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQ--AVSM---DSIP-------L-- 178 (272)
T ss_dssp CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEE--EEEG---GGCC-------C--
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeE--EeeH---HHhc-------c--
Confidence 3567899999998 799999999999999999999999988888777664321 222 2332 1110 1
Q ss_pred CCcccEEEecCCCCC
Q 027816 93 NGKLNILVNNVGTNI 107 (218)
Q Consensus 93 ~~~id~vv~~ag~~~ 107 (218)
+..|+||++++...
T Consensus 179 -~~~DivIn~t~~~~ 192 (272)
T 1p77_A 179 -QTYDLVINATSAGL 192 (272)
T ss_dssp -SCCSEEEECCCC--
T ss_pred -CCCCEEEECCCCCC
Confidence 36799999998654
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=8e-06 Score=67.21 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=56.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++++|+||+|+||..++..+... |++|+++++++++++... ++. ... .+|.++.+..+++ .+.... +
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g---~~~---~~~~~~~~~~~~~-~~~~~~--~ 239 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAG---ADY---VINASMQDPLAEI-RRITES--K 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHT---CSE---EEETTTSCHHHHH-HHHTTT--S
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhC---CCE---EecCCCccHHHHH-HHHhcC--C
Confidence 5789999999999999999999998 999999999988766543 332 111 2465554333222 222111 4
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|++++++|.
T Consensus 240 ~~d~vi~~~g~ 250 (347)
T 1jvb_A 240 GVDAVIDLNNS 250 (347)
T ss_dssp CEEEEEESCCC
T ss_pred CceEEEECCCC
Confidence 78999999984
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.11 E-value=1e-05 Score=66.81 Aligned_cols=79 Identities=22% Similarity=0.350 Sum_probs=57.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|+||..++..+...|++|+++++++++++...+ +. ... ..|..+.+..+.+.+.. ++.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lG---a~~---~~~~~~~~~~~~~~~~~----~~g 235 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LG---AKR---GINYRSEDFAAVIKAET----GQG 235 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT---CSE---EEETTTSCHHHHHHHHH----SSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC---CCE---EEeCCchHHHHHHHHHh----CCC
Confidence 57899999999999999999999999999999999988765443 32 111 24555544333333332 357
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 236 ~Dvvid~~g~ 245 (353)
T 4dup_A 236 VDIILDMIGA 245 (353)
T ss_dssp EEEEEESCCG
T ss_pred ceEEEECCCH
Confidence 9999999983
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=5.6e-05 Score=61.44 Aligned_cols=146 Identities=14% Similarity=0.096 Sum_probs=86.4
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecC--ChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSR--NEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r--~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+|+||||+|++|..++..|+.+|. ++++.++ ++++.+....++.+. +..+.....| +++.+.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a------ 71 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI------ 71 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG------
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH------
Confidence 689999999999999999999884 6888998 665444333333221 1111211111 011111
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc--------CcCC
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL--------SHVG 162 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~--------~~~~ 162 (218)
+ ...|+|||.||.... ...+. ...++.|+..+..+++.+.. .....++++|.-... .+.|
T Consensus 72 -l-~gaD~Vi~~Ag~~~~---~g~~r---~dl~~~N~~i~~~i~~~i~~----~~~~~vlv~SNPv~~~t~~~~k~~~~p 139 (313)
T 1hye_A 72 -I-DESDVVIITSGVPRK---EGMSR---MDLAKTNAKIVGKYAKKIAE----ICDTKIFVITNPVDVMTYKALVDSKFE 139 (313)
T ss_dssp -G-TTCSEEEECCSCCCC---TTCCH---HHHHHHHHHHHHHHHHHHHH----HCCCEEEECSSSHHHHHHHHHHHHCCC
T ss_pred -h-CCCCEEEECCCCCCC---CCCcH---HHHHHHHHHHHHHHHHHHHH----hCCeEEEEecCcHHHHHHHHHHhhCcC
Confidence 2 357999999996421 12233 34578999999888888743 332344544442211 1244
Q ss_pred CCchhhh-hHHHHHHHHHHHHHHhc
Q 027816 163 SGSIYGA-TKAAMNQLTRNLACEWA 186 (218)
Q Consensus 163 ~~~~Y~~-sK~a~~~~~~~l~~e~~ 186 (218)
....++. +..-...+...+++.+.
T Consensus 140 ~~rviG~gt~LD~~r~~~~la~~lg 164 (313)
T 1hye_A 140 RNQVFGLGTHLDSLRFKVAIAKFFG 164 (313)
T ss_dssp TTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred hhcEEEeCccHHHHHHHHHHHHHhC
Confidence 4556666 56556666667777654
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.08 E-value=1.1e-05 Score=68.70 Aligned_cols=85 Identities=14% Similarity=0.175 Sum_probs=59.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEE--eeCC---------CHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV--CDAA---------SPDQREKL 84 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~--~D~~---------~~~~~~~~ 84 (218)
.|++|+|+||+|+||..++..+...|++|+++++++++++.. +++.. ...... .|.. +.++++++
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGC---DLVINRAELGITDDIADDPRRVVETGRKL 295 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTC---CCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC---CEEEecccccccccccccccccchhhhHH
Confidence 578999999999999999999999999999999888876654 33321 112111 1211 12445555
Q ss_pred HHHHHhhcCCcccEEEecCC
Q 027816 85 IQEVGSKFNGKLNILVNNVG 104 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag 104 (218)
.+.+.+..++.+|+++.++|
T Consensus 296 ~~~v~~~~g~g~Dvvid~~G 315 (447)
T 4a0s_A 296 AKLVVEKAGREPDIVFEHTG 315 (447)
T ss_dssp HHHHHHHHSSCCSEEEECSC
T ss_pred HHHHHHHhCCCceEEEECCC
Confidence 66666665457999999988
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.08 E-value=2e-05 Score=55.61 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=54.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+++++|+|+ |.+|..+++.|.+.|++|++++++++..+...+.. .+..+..|.++.+.+.+. .. ...
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~------~~-~~~ 70 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA------GI-EDA 70 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT------TT-TTC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHc------Cc-ccC
Confidence 467899987 99999999999999999999999887765544321 134566788877664321 11 357
Q ss_pred cEEEecCC
Q 027816 97 NILVNNVG 104 (218)
Q Consensus 97 d~vv~~ag 104 (218)
|+|+++.+
T Consensus 71 d~vi~~~~ 78 (140)
T 1lss_A 71 DMYIAVTG 78 (140)
T ss_dssp SEEEECCS
T ss_pred CEEEEeeC
Confidence 99999865
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.8e-05 Score=64.94 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=56.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|++|..++..+...|++|+++++++++++... ++. ... .+|.++.+- .+.+.+..+ +..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g---a~~---~~d~~~~~~-~~~~~~~~~--~~~ 235 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALG---ADE---TVNYTHPDW-PKEVRRLTG--GKG 235 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHT---CSE---EEETTSTTH-HHHHHHHTT--TTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC---CCE---EEcCCcccH-HHHHHHHhC--CCC
Confidence 4789999999999999999999999999999999988776553 332 111 246665432 222222221 136
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|++|+++|
T Consensus 236 ~d~vi~~~g 244 (343)
T 2eih_A 236 ADKVVDHTG 244 (343)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 899999998
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.06 E-value=2.8e-05 Score=56.27 Aligned_cols=78 Identities=12% Similarity=0.026 Sum_probs=56.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
..++++|.|+ |.+|+.+++.|.+.|++|++++++. +..+...+... ..+..+..|.++.+.+++.- + .
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a~--i-----~ 70 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAG--I-----D 70 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHT--T-----T
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc---CCCeEEEcCCCCHHHHHHcC--h-----h
Confidence 3567888986 9999999999999999999999974 44433333221 12567789999988765431 1 2
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
..|.++.+.+
T Consensus 71 ~ad~vi~~~~ 80 (153)
T 1id1_A 71 RCRAILALSD 80 (153)
T ss_dssp TCSEEEECSS
T ss_pred hCCEEEEecC
Confidence 5688888765
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.4e-05 Score=65.29 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=56.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|+||..++..+...|++|+++++++++++.. +++. ... ..|..+.+..+++.+.+ . +..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g---a~~---~~~~~~~~~~~~~~~~~-~--~~g 217 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEYG---AEY---LINASKEDILRQVLKFT-N--GKG 217 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT---CSE---EEETTTSCHHHHHHHHT-T--TSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcC---CcE---EEeCCCchHHHHHHHHh-C--CCC
Confidence 578999999999999999999999999999999988876633 3332 221 24555433333332222 1 136
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 218 ~D~vid~~g~ 227 (334)
T 3qwb_A 218 VDASFDSVGK 227 (334)
T ss_dssp EEEEEECCGG
T ss_pred ceEEEECCCh
Confidence 8999999983
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.7e-05 Score=64.01 Aligned_cols=79 Identities=15% Similarity=0.251 Sum_probs=56.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++|+++|+|+ ||+|+++++.|++.|+ +|.+++|+.++.+.+.+.+......+ .+ .+++ .+.
T Consensus 137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~----~~---~~~~-------~~~ 201 (297)
T 2egg_A 137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAY----FS---LAEA-------ETR 201 (297)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCE----EC---HHHH-------HHT
T ss_pred CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCce----ee---HHHH-------Hhh
Confidence 3567899999998 7899999999999998 89999999988887776653211111 12 2222 222
Q ss_pred cCCcccEEEecCCCCC
Q 027816 92 FNGKLNILVNNVGTNI 107 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~ 107 (218)
. ...|+||++.+...
T Consensus 202 ~-~~aDivIn~t~~~~ 216 (297)
T 2egg_A 202 L-AEYDIIINTTSVGM 216 (297)
T ss_dssp G-GGCSEEEECSCTTC
T ss_pred h-ccCCEEEECCCCCC
Confidence 2 35799999988643
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=1.2e-05 Score=65.58 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=56.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|+||..++..+...|++|+++++++++++... ++. ... ..|.++.+..+++.+.+ . +..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~G---a~~---~~~~~~~~~~~~~~~~~-~--~~g 209 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALG---AWE---TIDYSHEDVAKRVLELT-D--GKK 209 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHT---CSE---EEETTTSCHHHHHHHHT-T--TCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---CCE---EEeCCCccHHHHHHHHh-C--CCC
Confidence 4789999999999999999999999999999999988776543 332 111 24555544333333322 1 136
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 210 ~Dvvid~~g~ 219 (325)
T 3jyn_A 210 CPVVYDGVGQ 219 (325)
T ss_dssp EEEEEESSCG
T ss_pred ceEEEECCCh
Confidence 8999999883
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=2.9e-05 Score=64.38 Aligned_cols=75 Identities=23% Similarity=0.287 Sum_probs=52.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh---hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++|++|+|+|| |+||..++..+...|++|+++++++ ++.+.. +++. . ..+ | .+ ++.+.+.+. .
T Consensus 179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~g---a--~~v--~-~~--~~~~~~~~~-~- 244 (366)
T 2cdc_A 179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EETK---T--NYY--N-SS--NGYDKLKDS-V- 244 (366)
T ss_dssp STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHHT---C--EEE--E-CT--TCSHHHHHH-H-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHhC---C--cee--c-hH--HHHHHHHHh-C-
Confidence 45899999999 9999999999999999999999987 665433 3332 1 122 5 44 222222222 1
Q ss_pred cCCcccEEEecCCC
Q 027816 92 FNGKLNILVNNVGT 105 (218)
Q Consensus 92 ~~~~id~vv~~ag~ 105 (218)
+.+|+++.++|.
T Consensus 245 --~~~d~vid~~g~ 256 (366)
T 2cdc_A 245 --GKFDVIIDATGA 256 (366)
T ss_dssp --CCEEEEEECCCC
T ss_pred --CCCCEEEECCCC
Confidence 468999999984
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.5e-05 Score=65.35 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=55.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|+||..++..+...|++|+++++++++++...+ +. ... ..|..+.+..+++.+.+ . +..
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lg---a~~---~~~~~~~~~~~~~~~~~-~--~~g 213 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LG---AAY---VIDTSTAPLYETVMELT-N--GIG 213 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HT---CSE---EEETTTSCHHHHHHHHT-T--TSC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CC---CcE---EEeCCcccHHHHHHHHh-C--CCC
Confidence 57899999999999999999888899999999999887765543 32 111 23555433333322222 1 136
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 214 ~Dvvid~~g~ 223 (340)
T 3gms_A 214 ADAAIDSIGG 223 (340)
T ss_dssp EEEEEESSCH
T ss_pred CcEEEECCCC
Confidence 9999999883
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.93 E-value=3.4e-05 Score=63.35 Aligned_cols=78 Identities=24% Similarity=0.348 Sum_probs=54.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC-
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG- 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~- 94 (218)
.|++|+|+||+|+||..++..+...|++|+++++++++.+...+ +.. .. ..|.. +++.+ .+.+..++
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga---~~---v~~~~--~~~~~---~v~~~~~~~ 226 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGA---DI---VLPLE--EGWAK---AVREATGGA 226 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTC---SE---EEESS--TTHHH---HHHHHTTTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC---cE---EecCc--hhHHH---HHHHHhCCC
Confidence 57899999999999999999999999999999999888754433 321 11 13443 33333 33333323
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 227 g~Dvvid~~g~ 237 (342)
T 4eye_A 227 GVDMVVDPIGG 237 (342)
T ss_dssp CEEEEEESCC-
T ss_pred CceEEEECCch
Confidence 69999999984
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=97.91 E-value=4e-05 Score=65.42 Aligned_cols=85 Identities=14% Similarity=0.230 Sum_probs=61.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEE--ee--------CCCHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV--CD--------AASPDQREKLI 85 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~--~D--------~~~~~~~~~~~ 85 (218)
.|++|+|+||+|++|...+..+...|++|+++++++++++.+ +++.. ...... .| ..+.++++++.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa---~~vi~~~~~d~~~~~~~~~~~~~~~~~~~ 303 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGA---EAIIDRNAEGYRFWKDENTQDPKEWKRFG 303 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTC---CEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCC---cEEEecCcCcccccccccccchHHHHHHH
Confidence 578999999999999999998889999999998888776654 33321 111111 11 24556677777
Q ss_pred HHHHhhcCC-cccEEEecCC
Q 027816 86 QEVGSKFNG-KLNILVNNVG 104 (218)
Q Consensus 86 ~~~~~~~~~-~id~vv~~ag 104 (218)
+.+.+..++ .+|+++.++|
T Consensus 304 ~~i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 304 KRIRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHHHTSCCEEEEEECSC
T ss_pred HHHHHHhCCCCCcEEEEcCC
Confidence 777766543 7999999988
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.91 E-value=3e-05 Score=64.31 Aligned_cols=73 Identities=19% Similarity=0.266 Sum_probs=56.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+.++|+|.|| |++|+.+++.|.+ .++|.+.+++.+.+++..+ .+..+.+|++|.+++.++++ .
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~~--------~ 77 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVMK--------E 77 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHHT--------T
T ss_pred CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHHh--------C
Confidence 3457999998 9999999999865 4789999999887765432 24567899999988777654 3
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
.|+||++++.
T Consensus 78 ~DvVi~~~p~ 87 (365)
T 3abi_A 78 FELVIGALPG 87 (365)
T ss_dssp CSEEEECCCG
T ss_pred CCEEEEecCC
Confidence 5999998874
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=5.9e-05 Score=62.43 Aligned_cols=78 Identities=14% Similarity=0.173 Sum_probs=54.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|+||..++..+...|++|+++++++++++... ++ +... ..|..+. ++.+.+.+. .++.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~---~~~~~~~-~~~~~~~~~---~~~g 231 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SL---GCDR---PINYKTE-PVGTVLKQE---YPEG 231 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HT---TCSE---EEETTTS-CHHHHHHHH---CTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-Hc---CCcE---EEecCCh-hHHHHHHHh---cCCC
Confidence 4789999999999999999999999999999999987765543 22 2121 1344432 233333322 2246
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.++|
T Consensus 232 ~D~vid~~g 240 (362)
T 2c0c_A 232 VDVVYESVG 240 (362)
T ss_dssp EEEEEECSC
T ss_pred CCEEEECCC
Confidence 899999988
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=8.1e-05 Score=62.04 Aligned_cols=78 Identities=17% Similarity=0.198 Sum_probs=58.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+.+++++|+|+ |+||+.+++.+...|++|++.+|+.++++...+.+.. .+ .++..+.+++.+.+.
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~---~~---~~~~~~~~~l~~~l~------- 230 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG---RI---HTRYSSAYELEGAVK------- 230 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT---SS---EEEECCHHHHHHHHH-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC---ee---EeccCCHHHHHHHHc-------
Confidence 578999999998 9999999999999999999999999877665443321 11 234445555554443
Q ss_pred CcccEEEecCCCC
Q 027816 94 GKLNILVNNVGTN 106 (218)
Q Consensus 94 ~~id~vv~~ag~~ 106 (218)
..|+||.+++..
T Consensus 231 -~aDvVi~~~~~p 242 (377)
T 2vhw_A 231 -RADLVIGAVLVP 242 (377)
T ss_dssp -HCSEEEECCCCT
T ss_pred -CCCEEEECCCcC
Confidence 359999988753
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00011 Score=60.78 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=56.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+++++|+|+|+ |++|+.+++.+...|++|++++|+.++++...+..... +. ++..+.+++.+.+.
T Consensus 164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~---~~---~~~~~~~~~~~~~~------- 229 (361)
T 1pjc_A 164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR---VE---LLYSNSAEIETAVA------- 229 (361)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG---SE---EEECCHHHHHHHHH-------
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce---eE---eeeCCHHHHHHHHc-------
Confidence 356789999999 99999999999999999999999998877665443221 11 22234444433222
Q ss_pred CcccEEEecCCCC
Q 027816 94 GKLNILVNNVGTN 106 (218)
Q Consensus 94 ~~id~vv~~ag~~ 106 (218)
..|+||++++..
T Consensus 230 -~~DvVI~~~~~~ 241 (361)
T 1pjc_A 230 -EADLLIGAVLVP 241 (361)
T ss_dssp -TCSEEEECCCCT
T ss_pred -CCCEEEECCCcC
Confidence 469999998864
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0001 Score=60.66 Aligned_cols=79 Identities=13% Similarity=0.118 Sum_probs=55.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+++++|+||+|+||...+..+...|++|+++++++++++... ++. ... ..|..+.+-.+++.+.+ .. ..+
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~G---a~~---~~~~~~~~~~~~v~~~~-~~--~g~ 234 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIG---AAH---VLNEKAPDFEATLREVM-KA--EQP 234 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHT---CSE---EEETTSTTHHHHHHHHH-HH--HCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---CCE---EEECCcHHHHHHHHHHh-cC--CCC
Confidence 379999999999999999988889999999999988876554 332 111 23554433333333322 21 258
Q ss_pred cEEEecCCC
Q 027816 97 NILVNNVGT 105 (218)
Q Consensus 97 d~vv~~ag~ 105 (218)
|+++.++|.
T Consensus 235 D~vid~~g~ 243 (349)
T 3pi7_A 235 RIFLDAVTG 243 (349)
T ss_dssp CEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999883
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00015 Score=59.47 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=54.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|++|...+..+...|++|+++++++++++...+ +.. .. ..|..+ ++.+.+.+. .++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa---~~---vi~~~~--~~~~~~~~~---~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGA---DI---VLNHKE--SLLNQFKTQ---GIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTC---SE---EECTTS--CHHHHHHHH---TCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC---cE---EEECCc--cHHHHHHHh---CCCC
Confidence 58899999999999999999998999999999998887665443 321 11 123332 222223332 3347
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.++|
T Consensus 218 ~Dvv~d~~g 226 (346)
T 3fbg_A 218 VDYVFCTFN 226 (346)
T ss_dssp EEEEEESSC
T ss_pred ccEEEECCC
Confidence 999999987
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0002 Score=58.62 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=53.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+|| |++|..++..+...|++|+.+++++++++... ++. ... .+|.++.+-.++ +.+. . +.
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lG---a~~---~~d~~~~~~~~~-~~~~---~-~~ 230 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELG---ADL---VVNPLKEDAAKF-MKEK---V-GG 230 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTT---CSE---EECTTTSCHHHH-HHHH---H-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCC---CCE---EecCCCccHHHH-HHHH---h-CC
Confidence 4789999999 88999999999999999999999988776543 332 111 246654332222 2222 2 36
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 231 ~d~vid~~g~ 240 (339)
T 1rjw_A 231 VHAAVVTAVS 240 (339)
T ss_dssp EEEEEESSCC
T ss_pred CCEEEECCCC
Confidence 8999999883
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00017 Score=51.23 Aligned_cols=73 Identities=14% Similarity=0.124 Sum_probs=55.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++++|.|+ |.+|..+++.|.+.|++|++++++++..+...+ . .+..+..|.++.+.++++ .. ...|
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a------~i-~~ad 73 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLA------HL-ECAK 73 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHT------TG-GGCS
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhc------Cc-ccCC
Confidence 46788887 889999999999999999999999987765543 2 245678999998876553 11 2568
Q ss_pred EEEecCC
Q 027816 98 ILVNNVG 104 (218)
Q Consensus 98 ~vv~~ag 104 (218)
+++.+.+
T Consensus 74 ~vi~~~~ 80 (140)
T 3fwz_A 74 WLILTIP 80 (140)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 8887755
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00014 Score=58.12 Aligned_cols=76 Identities=17% Similarity=0.256 Sum_probs=56.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++.... .+.....+ ++ .
T Consensus 122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~-----~l-------~-- 185 (281)
T 3o8q_A 122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE-----QL-------K-- 185 (281)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG-----GC-------C--
T ss_pred CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH-----Hh-------c--
Confidence 4678999999998 6999999999999996 99999999998888887765432 23332221 11 0
Q ss_pred cCCcccEEEecCCCC
Q 027816 92 FNGKLNILVNNVGTN 106 (218)
Q Consensus 92 ~~~~id~vv~~ag~~ 106 (218)
...|+||++.+..
T Consensus 186 --~~aDiIInaTp~g 198 (281)
T 3o8q_A 186 --QSYDVIINSTSAS 198 (281)
T ss_dssp --SCEEEEEECSCCC
T ss_pred --CCCCEEEEcCcCC
Confidence 2569999987653
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00015 Score=59.51 Aligned_cols=76 Identities=24% Similarity=0.416 Sum_probs=52.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|||+||+|+||..++..+...|++|+++ +++++++.. +++ +... +| .+ +++.+.+.+... +..
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~~----i~-~~-~~~~~~~~~~~~--~~g 216 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GATP----ID-AS-REPEDYAAEHTA--GQG 216 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSEE----EE-TT-SCHHHHHHHHHT--TSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCCE----ec-cC-CCHHHHHHHHhc--CCC
Confidence 47899999999999999999999999999998 777665543 333 2222 34 32 223333333222 136
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.++|
T Consensus 217 ~D~vid~~g 225 (343)
T 3gaz_A 217 FDLVYDTLG 225 (343)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 899999988
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.66 E-value=4e-05 Score=54.87 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=39.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
+++++|.|+ |++|+.+++.|.+.|++|.+.+|+.++.+.+.+++
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~ 64 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY 64 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence 789999997 99999999999999999999999998887766655
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=4.9e-05 Score=61.49 Aligned_cols=95 Identities=14% Similarity=0.084 Sum_probs=60.0
Q ss_pred ccCCcE-EEEecCCC-----------------c-hHHHHHHHHHhCCCeEEEecCChhhHH--------HHHHHhhh---
Q 027816 14 SLKGMT-ALVTGGTR-----------------G-IGQATVEELAGLGAVVHTCSRNEVELN--------KCLKEWQS--- 63 (218)
Q Consensus 14 ~~~~k~-vlItGa~~-----------------g-iG~~la~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~--- 63 (218)
.+.||+ ||||+|+. | .|.++|++++++||.|+++.+..+... ...+.+..
T Consensus 33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~ 112 (313)
T 1p9o_A 33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP 112 (313)
T ss_dssp HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence 467887 99998875 5 999999999999999999877533110 01111110
Q ss_pred CCCeEEEEEeeCCCHHHHHHHHHHH------------------------------HhhcCCcccEEEecCCCCCCC
Q 027816 64 KGFVVSGSVCDAASPDQREKLIQEV------------------------------GSKFNGKLNILVNNVGTNIRK 109 (218)
Q Consensus 64 ~~~~v~~~~~D~~~~~~~~~~~~~~------------------------------~~~~~~~id~vv~~ag~~~~~ 109 (218)
....+..+.+|+...++..+.+.+. .+.+ +..|++|.+|++....
T Consensus 113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~-~~~di~i~aAAVsDf~ 187 (313)
T 1p9o_A 113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPL-GPSAMFYLAAAVSDFY 187 (313)
T ss_dssp -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGG-GGGEEEEECSBCCSEE
T ss_pred cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhcc-CCCCEEEECCchhhcc
Confidence 1112334556666655555554332 2334 4689999999987544
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00012 Score=58.35 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=56.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++.. ..+... +. +++. +
T Consensus 116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~--~~---~~l~-------~- 179 (272)
T 3pwz_A 116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRIS--RY---EALE-------G- 179 (272)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEE--CS---GGGT-------T-
T ss_pred CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEe--eH---HHhc-------c-
Confidence 4678999999998 6999999999999996 999999999998888877643 123322 22 1111 0
Q ss_pred cCCcccEEEecCCCC
Q 027816 92 FNGKLNILVNNVGTN 106 (218)
Q Consensus 92 ~~~~id~vv~~ag~~ 106 (218)
...|+||++.+..
T Consensus 180 --~~~DivInaTp~g 192 (272)
T 3pwz_A 180 --QSFDIVVNATSAS 192 (272)
T ss_dssp --CCCSEEEECSSGG
T ss_pred --cCCCEEEECCCCC
Confidence 2569999987653
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00027 Score=55.45 Aligned_cols=81 Identities=15% Similarity=0.186 Sum_probs=57.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh-------------------hhHHHHHHHhhhC--CCeEEEE
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSK--GFVVSGS 71 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~v~~~ 71 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++++. ++.+...+.+... ...+..+
T Consensus 28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 106 (249)
T 1jw9_B 28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 106 (249)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence 356789999996 6999999999999997 899999886 6666666666542 3455555
Q ss_pred EeeCCCHHHHHHHHHHHHhhcCCcccEEEecCC
Q 027816 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (218)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag 104 (218)
..+++ .+.+.++++ ..|+||.+..
T Consensus 107 ~~~~~-~~~~~~~~~--------~~DvVi~~~d 130 (249)
T 1jw9_B 107 NALLD-DAELAALIA--------EHDLVLDCTD 130 (249)
T ss_dssp CSCCC-HHHHHHHHH--------TSSEEEECCS
T ss_pred eccCC-HhHHHHHHh--------CCCEEEEeCC
Confidence 55554 333333332 4588988754
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00018 Score=51.99 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=54.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
..+++++|.|+ |.+|..+++.|.+.|++|++++|+++..+...+ .. .+..+..|.++.+.+.+. .. .
T Consensus 17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~------~~-~ 83 (155)
T 2g1u_A 17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKEC------GM-E 83 (155)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTT------TG-G
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHc------Cc-c
Confidence 35678999996 999999999999999999999999876543210 11 233456787776543321 11 2
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
..|+||.+.+
T Consensus 84 ~ad~Vi~~~~ 93 (155)
T 2g1u_A 84 KADMVFAFTN 93 (155)
T ss_dssp GCSEEEECSS
T ss_pred cCCEEEEEeC
Confidence 5699998876
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00018 Score=55.13 Aligned_cols=73 Identities=10% Similarity=0.024 Sum_probs=56.1
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+++|.|+ |.+|+.+++.|.++|++|++++++++..+...+.. .+..+..|.++.+.++++- . ...|+
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~------i-~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAE------V-SKNDV 68 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHT------C-CTTCE
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcC------c-ccCCE
Confidence 5889996 89999999999999999999999998776654332 2456789999987765431 1 35688
Q ss_pred EEecCC
Q 027816 99 LVNNVG 104 (218)
Q Consensus 99 vv~~ag 104 (218)
++.+.+
T Consensus 69 vi~~~~ 74 (218)
T 3l4b_C 69 VVILTP 74 (218)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 887755
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.62 E-value=8.5e-05 Score=55.25 Aligned_cols=78 Identities=19% Similarity=0.240 Sum_probs=56.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++.+++++|.|+ |.+|..+++.|.+. |++|++++++++..+...+ .+ +..+..|.++.+.+.++ ...
T Consensus 36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g--~~~~~gd~~~~~~l~~~-----~~~ 103 (183)
T 3c85_A 36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG--RNVISGDATDPDFWERI-----LDT 103 (183)
T ss_dssp CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT--CCEEECCTTCHHHHHTB-----CSC
T ss_pred CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC--CCEEEcCCCCHHHHHhc-----cCC
Confidence 355678888985 99999999999999 9999999999887665432 22 34456788887654332 011
Q ss_pred CCcccEEEecCC
Q 027816 93 NGKLNILVNNVG 104 (218)
Q Consensus 93 ~~~id~vv~~ag 104 (218)
...|+||.+.+
T Consensus 104 -~~ad~vi~~~~ 114 (183)
T 3c85_A 104 -GHVKLVLLAMP 114 (183)
T ss_dssp -CCCCEEEECCS
T ss_pred -CCCCEEEEeCC
Confidence 35799998765
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00087 Score=54.84 Aligned_cols=115 Identities=11% Similarity=0.087 Sum_probs=69.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--e-----EEEecCCh--hhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--V-----VHTCSRNE--VELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~-----V~~~~r~~--~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
++|.||||+|.||..++..|+..|. + +++.++++ +..+....++.+.. ..+..+..- .+. . +.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~-~~~---~---~~ 76 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DKE---E---IA 76 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SCH---H---HH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEc-CCc---H---HH
Confidence 5799999999999999999998875 5 99999875 35555555665532 222211111 111 1 11
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCC-eEEEEec
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVG-SIVFISS 154 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~-~iv~~ss 154 (218)
+ ..-|+||+.||.... ...+. .+.++.|+.....+++.+ .+. +.+ .++++|.
T Consensus 77 ~-----~daDvVvitAg~prk---pG~tR---~dll~~N~~i~~~i~~~i----~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 77 F-----KDLDVAILVGSMPRR---DGMER---KDLLKANVKIFKCQGAAL----DKYAKKSVKVIVVGN 130 (333)
T ss_dssp T-----TTCSEEEECCSCCCC---TTCCT---TTTHHHHHHHHHHHHHHH----HHHSCTTCEEEECSS
T ss_pred h-----CCCCEEEEeCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCC
Confidence 1 346999999986421 11222 234567777666666555 444 334 4777776
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00024 Score=57.11 Aligned_cols=74 Identities=20% Similarity=0.244 Sum_probs=52.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++++|+||+|++|..++..+...|++|+.+++++++++... ++. ... ..|..+.+++ .+.+ +.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g---a~~---~~~~~~~~~~---~~~~-----~~ 189 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALG---AEE---AATYAEVPER---AKAW-----GG 189 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTT---CSE---EEEGGGHHHH---HHHT-----TS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcC---CCE---EEECCcchhH---HHHh-----cC
Confidence 5789999999999999999999999999999999888766543 332 111 1454441222 2222 35
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++. +|.
T Consensus 190 ~d~vid-~g~ 198 (302)
T 1iz0_A 190 LDLVLE-VRG 198 (302)
T ss_dssp EEEEEE-CSC
T ss_pred ceEEEE-CCH
Confidence 899999 873
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00099 Score=52.81 Aligned_cols=43 Identities=26% Similarity=0.227 Sum_probs=39.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
+|+++|.|+ ||.|++++..|++.|.+|.+.+|+.++.+++. ++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~ 160 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL 160 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence 789999997 89999999999999999999999999887776 44
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0014 Score=53.79 Aligned_cols=114 Identities=13% Similarity=0.118 Sum_probs=68.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.+++|.|+|++|.+|..++..++..|. +|++.+.++++.+....++.+.. ..+.. . ++.. +. +
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~~---~a---l-- 74 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDIK---EA---L-- 74 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCHH---HH---H--
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCHH---HH---h--
Confidence 467899999999999999999999994 89999999887776555554321 11110 1 1221 11 2
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCe-EEEEec
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGS-IVFISS 154 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~-iv~~ss 154 (218)
..-|+||.+||.... ...+. .+.++.|..-...+.+.+ .+. +.+. ++++|.
T Consensus 75 ---~dADvVvitaG~p~k---pG~~R---~dLl~~N~~I~~~i~~~i----~~~~p~a~~vlvvsN 127 (343)
T 3fi9_A 75 ---TDAKYIVSSGGAPRK---EGMTR---EDLLKGNAEIAAQLGKDI----KSYCPDCKHVIIIFN 127 (343)
T ss_dssp ---TTEEEEEECCC----------CH---HHHHHHHHHHHHHHHHHH----HHHCTTCCEEEECSS
T ss_pred ---CCCCEEEEccCCCCC---CCCCH---HHHHHHHHHHHHHHHHHH----HHhccCcEEEEEecC
Confidence 246999999996321 12232 233556665554444444 443 3453 566664
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00051 Score=56.83 Aligned_cols=75 Identities=19% Similarity=0.263 Sum_probs=54.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+|+ |+||..++..+...|++|+++++++++.+...+.+. ... ..|..+.+.+.+ .. +.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG---a~~---v~~~~~~~~~~~-------~~-~~ 251 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG---ADS---FLVSRDQEQMQA-------AA-GT 251 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC---CSE---EEETTCHHHHHH-------TT-TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC---Cce---EEeccCHHHHHH-------hh-CC
Confidence 5789999996 999999999998999999999999887765543332 111 246666443322 22 36
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 252 ~D~vid~~g~ 261 (366)
T 1yqd_A 252 LDGIIDTVSA 261 (366)
T ss_dssp EEEEEECCSS
T ss_pred CCEEEECCCc
Confidence 8999999884
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0033 Score=50.94 Aligned_cols=113 Identities=17% Similarity=0.153 Sum_probs=67.9
Q ss_pred EEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCCC--eEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+|.|+||+|.+|..++..|+++| .+|++.++++ .+....++.+... .+..... ..+.++.+ .
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~--------~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLG----PEQLPDCL--------K 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEES----GGGHHHHH--------T
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecC----CCCHHHHh--------C
Confidence 68999999999999999999988 6899999987 3333344443321 1221110 01222222 2
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS 154 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss 154 (218)
..|+||+.+|..... ..+.. +.+..|+.....+++.+..+ .+.+.++++|.
T Consensus 68 ~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sN 118 (314)
T 1mld_A 68 GCDVVVIPAGVPRKP---GMTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISN 118 (314)
T ss_dssp TCSEEEECCSCCCCT---TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred CCCEEEECCCcCCCC---CCcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECC
Confidence 469999999975321 12221 23566666666666555322 34467777765
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00098 Score=54.94 Aligned_cols=83 Identities=19% Similarity=0.142 Sum_probs=56.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++|||+|+ |++|...+..+...|++ |+++++++++++...+ + .. .+.....|..+.+++.+.+.+... +.
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~~--~~~~~~~~~~~~~~~~~~v~~~t~--g~ 251 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-CP--EVVTHKVERLSAEESAKKIVESFG--GI 251 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-CT--TCEEEECCSCCHHHHHHHHHHHTS--SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-ch--hcccccccccchHHHHHHHHHHhC--CC
Confidence 4789999998 99999999888889997 9999999887765443 3 21 233233454455555444433322 23
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.+.|.
T Consensus 252 g~Dvvid~~g~ 262 (363)
T 3m6i_A 252 EPAVALECTGV 262 (363)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 68999999883
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00061 Score=57.23 Aligned_cols=47 Identities=23% Similarity=0.328 Sum_probs=40.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 61 (218)
++.|++++|.|+ |++|+.+++.+...|+ +|++++|+.++.+...+.+
T Consensus 164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~ 211 (404)
T 1gpj_A 164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL 211 (404)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 357899999998 9999999999999998 8999999988776655554
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0058 Score=48.62 Aligned_cols=42 Identities=21% Similarity=0.137 Sum_probs=35.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 60 (218)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++..+...+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 57777875 7899999999999999999999999887665544
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0005 Score=56.39 Aligned_cols=78 Identities=18% Similarity=0.209 Sum_probs=53.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC-
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (218)
.|++|+|+|+ |++|..++..+...|+ +|+++++++++++... ++.. .. ..|..+.+ +.+ .+.+..+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga---~~---~~~~~~~~-~~~---~v~~~~~g 234 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGA---DY---VINPFEED-VVK---EVMDITDG 234 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTC---SE---EECTTTSC-HHH---HHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCC---CE---EECCCCcC-HHH---HHHHHcCC
Confidence 6889999999 9999999999989999 8999999987765443 3321 11 13544322 222 2222222
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
..+|+++.++|.
T Consensus 235 ~g~D~vid~~g~ 246 (348)
T 2d8a_A 235 NGVDVFLEFSGA 246 (348)
T ss_dssp SCEEEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 258999999883
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0007 Score=55.91 Aligned_cols=78 Identities=14% Similarity=0.154 Sum_probs=53.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+| +|++|...+..+...|++|+++++++++++.. +++.. .. ..| .+.+++.+.+.+... +..
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa---~~---vi~-~~~~~~~~~v~~~~~--g~g 257 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGA---DH---GIN-RLEEDWVERVYALTG--DRG 257 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTC---SE---EEE-TTTSCHHHHHHHHHT--TCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCC---CE---EEc-CCcccHHHHHHHHhC--CCC
Confidence 478999999 89999999988888999999999998876654 33322 11 134 333333333333322 126
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.++|
T Consensus 258 ~D~vid~~g 266 (363)
T 3uog_A 258 ADHILEIAG 266 (363)
T ss_dssp EEEEEEETT
T ss_pred ceEEEECCC
Confidence 899999988
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0023 Score=51.35 Aligned_cols=90 Identities=9% Similarity=0.217 Sum_probs=61.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh------------------hhHHHHHHHhhh--CCCeEEEE
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE------------------VELNKCLKEWQS--KGFVVSGS 71 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~~~~--~~~~v~~~ 71 (218)
..+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+. .+.+...+.+.. ...++..+
T Consensus 32 ~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~ 110 (292)
T 3h8v_A 32 EKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVH 110 (292)
T ss_dssp CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEe
Confidence 3567789999986 7999999999999997 899998764 344444444443 34567777
Q ss_pred EeeCCCHHHHHHHHHHHHhh-c--CCcccEEEecC
Q 027816 72 VCDAASPDQREKLIQEVGSK-F--NGKLNILVNNV 103 (218)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~-~--~~~id~vv~~a 103 (218)
..++++.+.++++++.+... + ....|+|+.+.
T Consensus 111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~ 145 (292)
T 3h8v_A 111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV 145 (292)
T ss_dssp CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred cccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence 77787777777766544221 0 02468888664
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0011 Score=54.86 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=50.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|+||..++..+...|++|+.+++ +++.+.. +++. ... ..|..+.+-. +++.+. +.
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~lG---a~~---v~~~~~~~~~----~~~~~~--~g 248 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKLG---ADD---VIDYKSGSVE----EQLKSL--KP 248 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHTT---CSE---EEETTSSCHH----HHHHTS--CC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHcC---CCE---EEECCchHHH----HHHhhc--CC
Confidence 5789999999999999999888889999988884 4554433 3332 221 1354443222 223222 46
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 249 ~D~vid~~g~ 258 (375)
T 2vn8_A 249 FDFILDNVGG 258 (375)
T ss_dssp BSEEEESSCT
T ss_pred CCEEEECCCC
Confidence 8999999885
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0015 Score=54.10 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=53.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
..|++|+|+||+|++|...+..+...|++|+.+. ++++++ ..+++. ... ..|..+.+- .+.+.+..++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lG---a~~---vi~~~~~~~----~~~v~~~t~g 230 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRG---AEE---VFDYRAPNL----AQTIRTYTKN 230 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTT---CSE---EEETTSTTH----HHHHHHHTTT
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcC---CcE---EEECCCchH----HHHHHHHccC
Confidence 4578999999999999999998888999988886 555554 334432 111 235444332 2333333335
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
++|+++.+.|.
T Consensus 231 ~~d~v~d~~g~ 241 (371)
T 3gqv_A 231 NLRYALDCITN 241 (371)
T ss_dssp CCCEEEESSCS
T ss_pred CccEEEECCCc
Confidence 69999999884
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0009 Score=54.95 Aligned_cols=82 Identities=22% Similarity=0.270 Sum_probs=52.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~~ 94 (218)
.|++|+|+|+ |++|...+..+...|++|+++++++++++... ++. ... ..|..+ .+..+++.+.+....++
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lG---a~~---~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCG---ADV---TLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTT---CSE---EEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhC---CCE---EEcCcccccHHHHHHHHhccccCC
Confidence 4789999997 89999999888889999999999888765443 332 121 134443 22222222222100123
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 240 g~D~vid~~g~ 250 (352)
T 1e3j_A 240 LPNVTIDCSGN 250 (352)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 68999999883
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.002 Score=52.50 Aligned_cols=115 Identities=7% Similarity=0.011 Sum_probs=65.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCC---eEEEEEeeCCCHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGF---VVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
...+++|.|+|+ |.+|..++..|+..|. +|++.++++++++....++.+... .+... .| +.+
T Consensus 6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~-~~--~~~--------- 72 (326)
T 3vku_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY-SA--EYS--------- 72 (326)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGG---------
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE-EC--cHH---------
Confidence 345678999996 9999999999999886 899999999887766666654321 22222 12 111
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
.+ ..-|+||+.||.... ...+. ...++.|.--...+.+.+ .+. +.+.++++|.
T Consensus 73 --a~-~~aDiVvi~ag~~~k---pG~tR---~dL~~~N~~I~~~i~~~i----~~~~p~a~ilvvtN 126 (326)
T 3vku_A 73 --DA-KDADLVVITAGAPQK---PGETR---LDLVNKNLKILKSIVDPI----VDSGFNGIFLVAAN 126 (326)
T ss_dssp --GG-TTCSEEEECCCCC----------------------CHHHHHHHH----HTTTCCSEEEECSS
T ss_pred --Hh-cCCCEEEECCCCCCC---CCchH---HHHHHHHHHHHHHHHHHH----HhcCCceEEEEccC
Confidence 12 356999999996321 11122 233556655554444444 443 4456666665
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0011 Score=54.03 Aligned_cols=76 Identities=18% Similarity=0.261 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+|+ |++|...+..+...|++|+.+++++++++.. +++. ... ..|..+.+..+.+.+ .. +.
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lG---a~~---~i~~~~~~~~~~~~~----~~-g~ 232 (340)
T 3s2e_A 166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLG---AEV---AVNARDTDPAAWLQK----EI-GG 232 (340)
T ss_dssp TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTT---CSE---EEETTTSCHHHHHHH----HH-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcC---CCE---EEeCCCcCHHHHHHH----hC-CC
Confidence 5789999997 8999999988888999999999998876644 3332 222 135444333333222 22 47
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|.++.++|
T Consensus 233 ~d~vid~~g 241 (340)
T 3s2e_A 233 AHGVLVTAV 241 (340)
T ss_dssp EEEEEESSC
T ss_pred CCEEEEeCC
Confidence 899999877
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00052 Score=55.78 Aligned_cols=75 Identities=24% Similarity=0.221 Sum_probs=49.0
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+|+|+||+|++|...+..+...|++|+.+++++++++... ++. ... ..|..+.+ .+.+.++ .++.+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lG---a~~---~i~~~~~~--~~~~~~~---~~~~~d~ 219 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLG---AKE---VLAREDVM--AERIRPL---DKQRWAA 219 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTT---CSE---EEECC-----------C---CSCCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcC---CcE---EEecCCcH--HHHHHHh---cCCcccE
Confidence 7999999999999999988889999999999887766543 332 111 13444332 1222222 1246899
Q ss_pred EEecCCC
Q 027816 99 LVNNVGT 105 (218)
Q Consensus 99 vv~~ag~ 105 (218)
++.++|.
T Consensus 220 vid~~g~ 226 (328)
T 1xa0_A 220 AVDPVGG 226 (328)
T ss_dssp EEECSTT
T ss_pred EEECCcH
Confidence 9999883
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0008 Score=51.02 Aligned_cols=42 Identities=29% Similarity=0.343 Sum_probs=36.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 60 (218)
+++|+||+|.+|..+++.|+++|++|.+.+|+++..+...+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~ 43 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE 43 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 588999999999999999999999999999998876655443
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00044 Score=55.24 Aligned_cols=47 Identities=21% Similarity=0.219 Sum_probs=40.3
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLK 59 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~ 59 (218)
..++++|+++|.|+ ||.|++++..|.+.|+ +|.+++|+.++.+++.+
T Consensus 117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~ 164 (282)
T 3fbt_A 117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG 164 (282)
T ss_dssp TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 34678999999997 6999999999999998 89999999987665543
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0021 Score=53.04 Aligned_cols=77 Identities=14% Similarity=0.094 Sum_probs=51.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHh-CCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAG-LGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++|+|+||+|++|...+..+.. .|++|+.+++++++.+... ++. .... .|..+ ++ .+.+.+..++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lG---ad~v---i~~~~--~~---~~~v~~~~~~ 238 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLG---AHHV---IDHSK--PL---AAEVAALGLG 238 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTT---CSEE---ECTTS--CH---HHHHHTTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcC---CCEE---EeCCC--CH---HHHHHHhcCC
Confidence 578999999999999887766555 5899999999988765543 332 1111 34332 22 2333333335
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
.+|+++.++|
T Consensus 239 g~Dvvid~~g 248 (363)
T 4dvj_A 239 APAFVFSTTH 248 (363)
T ss_dssp CEEEEEECSC
T ss_pred CceEEEECCC
Confidence 7999999987
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0011 Score=54.64 Aligned_cols=38 Identities=18% Similarity=0.144 Sum_probs=32.3
Q ss_pred CC-cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 16 KG-MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 16 ~~-k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
.| .+|+|+||+|++|...+..+...|++|+.++++.++
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 46 899999999999999888777789998888776554
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0032 Score=49.36 Aligned_cols=81 Identities=11% Similarity=0.192 Sum_probs=52.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh-------------------hhHHHHHHHhhhC--CCeEEEE
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQSK--GFVVSGS 71 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~--~~~v~~~ 71 (218)
.+++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+...+.+... ..++..+
T Consensus 25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~ 103 (251)
T 1zud_1 25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL 103 (251)
T ss_dssp HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 456789999998 6799999999999997 788886532 3444555555432 3445555
Q ss_pred EeeCCCHHHHHHHHHHHHhhcCCcccEEEecCC
Q 027816 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (218)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag 104 (218)
..+++ .+.+.++++ ..|+||.+..
T Consensus 104 ~~~~~-~~~~~~~~~--------~~DvVi~~~d 127 (251)
T 1zud_1 104 QQRLT-GEALKDAVA--------RADVVLDCTD 127 (251)
T ss_dssp CSCCC-HHHHHHHHH--------HCSEEEECCS
T ss_pred eccCC-HHHHHHHHh--------cCCEEEECCC
Confidence 44443 334433333 2488887643
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0095 Score=48.46 Aligned_cols=113 Identities=11% Similarity=0.044 Sum_probs=66.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC------CCeEEEEEeeCCCHHHHHHHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
++.++|.|+|| |.+|..++..|+..|. +|++.++++++.+....++.+. ...+.. ..| .+.
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~a------- 72 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YAA------- 72 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GGG-------
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HHH-------
Confidence 45678999998 9999999999999998 9999999988766444444321 222221 112 111
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
+ ..-|+||..+|..... ..+.. ..+..|..-...+.+.+ .+. +.+.++++|.
T Consensus 73 ----~-~~aDiVIiaag~p~k~---G~~R~---dl~~~N~~i~~~i~~~i----~~~~p~a~iivvtN 125 (324)
T 3gvi_A 73 ----I-EGADVVIVTAGVPRKP---GMSRD---DLLGINLKVMEQVGAGI----KKYAPEAFVICITN 125 (324)
T ss_dssp ----G-TTCSEEEECCSCCCC--------C---HHHHHHHHHHHHHHHHH----HHHCTTCEEEECCS
T ss_pred ----H-CCCCEEEEccCcCCCC---CCCHH---HHHHhhHHHHHHHHHHH----HHHCCCeEEEecCC
Confidence 1 2459999999864211 12222 23445554444444443 433 4456777775
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0076 Score=49.08 Aligned_cols=113 Identities=14% Similarity=0.052 Sum_probs=70.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++|.|+|+ |.+|..++..|++.|. +|++.++++++.+....++.+.. ..+.....| .+
T Consensus 5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----------- 69 (326)
T 3pqe_A 5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----------- 69 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG-----------
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH-----------
Confidence 468899996 9999999999999986 89999999888776655554431 122222222 11
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecC
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSV 155 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~ 155 (218)
.+ ..-|+||.++|.... ...+..+ .++.|..-...+.+.+ .+. +.+.++++|.-
T Consensus 70 a~-~~aDvVvi~ag~p~k---pG~~R~d---L~~~N~~Iv~~i~~~I----~~~~p~a~vlvvtNP 124 (326)
T 3pqe_A 70 DC-KDADIVCICAGANQK---PGETRLE---LVEKNLKIFKGIVSEV----MASGFDGIFLVATNP 124 (326)
T ss_dssp GG-TTCSEEEECCSCCCC---TTCCHHH---HHHHHHHHHHHHHHHH----HHTTCCSEEEECSSS
T ss_pred Hh-CCCCEEEEecccCCC---CCccHHH---HHHHHHHHHHHHHHHH----HHhcCCeEEEEcCCh
Confidence 11 346999999986321 1233333 3556655554444444 443 44566777753
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00062 Score=55.71 Aligned_cols=77 Identities=17% Similarity=0.272 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++|+|+|| |++|..++..+...|+ +|+.+++++++++...+ + . . ...|..+ +++.+.+.+.. ++
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a--~----~v~~~~~-~~~~~~~~~~~---~~ 230 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A--D----RLVNPLE-EDLLEVVRRVT---GS 230 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C--S----EEECTTT-SCHHHHHHHHH---SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H--H----hccCcCc-cCHHHHHHHhc---CC
Confidence 6789999999 9999999988888999 89999998876543321 1 1 1 1235444 23333333332 24
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 231 g~D~vid~~g~ 241 (343)
T 2dq4_A 231 GVEVLLEFSGN 241 (343)
T ss_dssp CEEEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 68999999883
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.037 Score=45.38 Aligned_cols=118 Identities=15% Similarity=0.110 Sum_probs=67.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-------eEEEecCChh--hHHHHHHHhhhCC--CeEEEEEeeCCCHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEV--ELNKCLKEWQSKG--FVVSGSVCDAASPDQRE 82 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~ 82 (218)
+++.-+|.|+||+|+||..++..|++... ++.+.+.++. .++...-++.+.. ........+ +..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~~--- 95 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DPR--- 95 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CHH---
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--ChH---
Confidence 45556899999999999999999987642 7899998654 3344444454421 111112221 221
Q ss_pred HHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCC-eEEEEec
Q 027816 83 KLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVG-SIVFISS 154 (218)
Q Consensus 83 ~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~-~iv~~ss 154 (218)
+. + ..-|++|..||... -...+.+++ ++.|..=. +...+.+.+. .++ .|+++|.
T Consensus 96 ~a-------~-~~advVvi~aG~pr---kpGmtR~DL---l~~Na~I~----~~~~~~i~~~a~~~~~vlvvsN 151 (345)
T 4h7p_A 96 VA-------F-DGVAIAIMCGAFPR---KAGMERKDL---LEMNARIF----KEQGEAIAAVAASDCRVVVVGN 151 (345)
T ss_dssp HH-------T-TTCSEEEECCCCCC---CTTCCHHHH---HHHHHHHH----HHHHHHHHHHSCTTCEEEECSS
T ss_pred HH-------h-CCCCEEEECCCCCC---CCCCCHHHH---HHHhHHHH----HHHHHHHHhhccCceEEEEeCC
Confidence 11 1 24699999999742 123565555 44554433 4444444542 334 4555554
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0017 Score=53.80 Aligned_cols=79 Identities=19% Similarity=0.261 Sum_probs=52.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++. ... ..|..+ .+++.+.+.+.. +
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lG---a~~---vi~~~~~~~~~~~~~~~~~---~ 260 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFG---ATD---FVNPNDHSEPISQVLSKMT---N 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTT---CCE---EECGGGCSSCHHHHHHHHH---T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhC---Cce---EEeccccchhHHHHHHHHh---C
Confidence 4789999996 9999999988888999 8999999988876543 332 111 134332 122333333332 2
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.++|.
T Consensus 261 ~g~D~vid~~g~ 272 (374)
T 1cdo_A 261 GGVDFSLECVGN 272 (374)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 468999999884
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0079 Score=49.08 Aligned_cols=118 Identities=11% Similarity=0.018 Sum_probs=71.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
....++|.|+|+ |.+|..++..++..|. +|++.++++++.+....++.+.. ........ .|.++
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~-------- 84 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV-------- 84 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG--------
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH--------
Confidence 345678999998 9999999999999996 89999999888777666665431 11111111 12221
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecC
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV 155 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~ 155 (218)
+ ..-|++|.+||.... ...+.++ .++.|.--...+.+.+..+ .+.+.++++|.-
T Consensus 85 ---~-~~aDiVvi~aG~~~k---pG~tR~d---L~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNP 138 (331)
T 4aj2_A 85 ---T-ANSKLVIITAGARQQ---EGESRLN---LVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNP 138 (331)
T ss_dssp ---G-TTEEEEEECCSCCCC---TTCCGGG---GHHHHHHHHHHHHHHHHHH---CTTCEEEECSSS
T ss_pred ---h-CCCCEEEEccCCCCC---CCccHHH---HHHHHHHHHHHHHHHHHHH---CCCeEEEEecCh
Confidence 1 356999999997432 2233322 3455554444444444321 344567777753
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0011 Score=51.17 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=53.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.+.++|.|+ |.+|+.+++.|.++|+ |++++++++..+... . .+..+..|.++.+.++++- . ...
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~------i-~~a 72 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKAN------V-RGA 72 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTT------C-TTC
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcC------c-chh
Confidence 357899997 8999999999999999 999999987765443 1 2567788998887765430 1 245
Q ss_pred cEEEecCC
Q 027816 97 NILVNNVG 104 (218)
Q Consensus 97 d~vv~~ag 104 (218)
|.++.+.+
T Consensus 73 d~vi~~~~ 80 (234)
T 2aef_A 73 RAVIVDLE 80 (234)
T ss_dssp SEEEECCS
T ss_pred cEEEEcCC
Confidence 77776654
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0033 Score=51.78 Aligned_cols=78 Identities=23% Similarity=0.247 Sum_probs=52.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|+|| |++|...+..+... |++|+.+++++++++... ++. ... ..|..+. +.+.+.++.. +.
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lG---a~~---vi~~~~~--~~~~v~~~~~--g~ 253 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLG---ADH---VVDARRD--PVKQVMELTR--GR 253 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTT---CSE---EEETTSC--HHHHHHHHTT--TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhC---CCE---EEeccch--HHHHHHHHhC--CC
Confidence 4789999999 89999988877778 999999999888766543 332 111 1354443 3333333322 12
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 254 g~Dvvid~~G~ 264 (359)
T 1h2b_A 254 GVNVAMDFVGS 264 (359)
T ss_dssp CEEEEEESSCC
T ss_pred CCcEEEECCCC
Confidence 68999999884
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0047 Score=50.72 Aligned_cols=79 Identities=24% Similarity=0.303 Sum_probs=51.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCC--CHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA--SPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~~~~~~~~~~~~~ 92 (218)
.|.+|+|+|+ |++|...+..+...|+ +|+++++++++++... ++. ... ..|.. +.++.. +++.+..
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lG---a~~---vi~~~~~~~~~~~---~~i~~~~ 239 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIG---ADL---VLQISKESPQEIA---RKVEGQL 239 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTT---CSE---EEECSSCCHHHHH---HHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC---CCE---EEcCcccccchHH---HHHHHHh
Confidence 4789999996 8999999888878999 8999999887765443 332 111 13444 223322 2222222
Q ss_pred CCcccEEEecCCC
Q 027816 93 NGKLNILVNNVGT 105 (218)
Q Consensus 93 ~~~id~vv~~ag~ 105 (218)
++.+|+++.++|.
T Consensus 240 ~~g~D~vid~~g~ 252 (356)
T 1pl8_A 240 GCKPEVTIECTGA 252 (356)
T ss_dssp TSCCSEEEECSCC
T ss_pred CCCCCEEEECCCC
Confidence 2358999999873
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.017 Score=46.75 Aligned_cols=114 Identities=16% Similarity=0.079 Sum_probs=68.4
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC--hhhHHHHHHHhhhC------CCeEEEEEeeCCCHHHHHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN--EVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~------~~~v~~~~~D~~~~~~~~~~~ 85 (218)
++.++|.|+|+ |.+|..++..++..|. +|++.+++ ++..+....++.+. ...+.. .+ +.+
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t~--d~~------ 74 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--TS--DYA------ 74 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--ES--CGG------
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--cC--CHH------
Confidence 45678999997 9999999999999998 99999998 44444433333221 122221 11 111
Q ss_pred HHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec
Q 027816 86 QEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS 154 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss 154 (218)
.+ ..-|+||.++|.... ...+..+ .++.|..-...+.+.+.. ..+.+.++++|.
T Consensus 75 -----a~-~~aDvVIiaag~p~k---pg~~R~d---l~~~N~~i~~~i~~~i~~---~~p~a~vlvvsN 128 (315)
T 3tl2_A 75 -----DT-ADSDVVVITAGIARK---PGMSRDD---LVATNSKIMKSITRDIAK---HSPNAIIVVLTN 128 (315)
T ss_dssp -----GG-TTCSEEEECCSCCCC---TTCCHHH---HHHHHHHHHHHHHHHHHH---HCTTCEEEECCS
T ss_pred -----Hh-CCCCEEEEeCCCCCC---CCCCHHH---HHHHHHHHHHHHHHHHHH---hCCCeEEEECCC
Confidence 12 356999999996422 1234333 355665555444444432 234456777775
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0018 Score=53.63 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|++|+|+|+ |++|..++..+...|+ +|+.+++++++++... ++.. .. ..|..+ .+++.+.+.+. .+
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa---~~---vi~~~~~~~~~~~~~~~~---~~ 259 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGA---TE---CVNPQDYKKPIQEVLTEM---SN 259 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTC---SE---EECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCC---ce---EecccccchhHHHHHHHH---hC
Confidence 4789999995 9999999988888999 8999999988776543 3321 11 134332 12233333333 22
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.++|.
T Consensus 260 ~g~D~vid~~g~ 271 (374)
T 2jhf_A 260 GGVDFSFEVIGR 271 (374)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEECCCC
Confidence 468999999884
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00053 Score=54.66 Aligned_cols=43 Identities=16% Similarity=0.255 Sum_probs=37.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNK 56 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~ 56 (218)
.++++|+++|+|+ ||.|+++++.|++.|+ +|.+++|+.++.++
T Consensus 113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 156 (277)
T 3don_A 113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN 156 (277)
T ss_dssp TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 4578999999997 7999999999999998 89999999877543
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0059 Score=50.65 Aligned_cols=79 Identities=19% Similarity=0.219 Sum_probs=53.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCC--CHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA--SPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~--~~~~~~~~~~~~~~~~ 92 (218)
.|++|||+| +|++|...+..+...| ++|+.+++++++++... ++. ... ..|.. +.+++.+. +.+..
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lG---a~~---vi~~~~~~~~~~~~~---v~~~~ 263 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIG---ADL---TLNRRETSVEERRKA---IMDIT 263 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTT---CSE---EEETTTSCHHHHHHH---HHHHT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcC---CcE---EEeccccCcchHHHH---HHHHh
Confidence 478999999 8999999998888899 59999999988766543 332 111 13433 13443333 33333
Q ss_pred CC-cccEEEecCCC
Q 027816 93 NG-KLNILVNNVGT 105 (218)
Q Consensus 93 ~~-~id~vv~~ag~ 105 (218)
++ .+|+++.++|.
T Consensus 264 ~g~g~Dvvid~~g~ 277 (380)
T 1vj0_A 264 HGRGADFILEATGD 277 (380)
T ss_dssp TTSCEEEEEECSSC
T ss_pred CCCCCcEEEECCCC
Confidence 23 58999999884
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0012 Score=51.95 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=36.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKC 57 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~ 57 (218)
.+++ +++|.|+ ||.|+++++.|++.|+ +|.+.+|+.++.+++
T Consensus 106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~l 148 (253)
T 3u62_A 106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKAL 148 (253)
T ss_dssp CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTC
T ss_pred CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 4567 8999997 8999999999999998 899999998876544
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.022 Score=45.67 Aligned_cols=111 Identities=8% Similarity=-0.073 Sum_probs=65.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+|.|+|+ |.+|.+++..|++.|. +|++.+++++..+....++.+. ......... +|.+. +
T Consensus 2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a----~------- 67 (294)
T 1oju_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----L------- 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG----G-------
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH----h-------
Confidence 6789999 9999999999999987 8999999998765333333211 111111111 12222 1
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|+||..+|.... ...+..++ ++.|.--. +...+.+.+. +.+.++++|.
T Consensus 68 -~~aDiVViaag~~~k---pG~~R~dl---~~~N~~i~----~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 68 -KGSEIIVVTAGLARK---PGMTRLDL---AHKNAGII----KDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp -TTCSEEEECCCCCCC---SSCCHHHH---HHHHHHHH----HHHHHHHHTTSTTCEEEECSS
T ss_pred -CCCCEEEECCCCCCC---CCCcHHHH---HHHHHHHH----HHHHHHHHhhCCCeEEEEeCC
Confidence 245999999986421 22344333 45554444 4444444544 3456666665
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0024 Score=52.83 Aligned_cols=79 Identities=18% Similarity=0.187 Sum_probs=52.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|.+|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++.. .. ..|..+ .+++.+.+.+.. +
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa---~~---vi~~~~~~~~~~~~v~~~~---~ 263 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGA---TD---CLNPRELDKPVQDVITELT---A 263 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTC---SE---EECGGGCSSCHHHHHHHHH---T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCC---cE---EEccccccchHHHHHHHHh---C
Confidence 4789999996 9999999888888999 8999999988866543 3321 11 134332 122333333322 2
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.+.|.
T Consensus 264 ~g~Dvvid~~G~ 275 (376)
T 1e3i_A 264 GGVDYSLDCAGT 275 (376)
T ss_dssp SCBSEEEESSCC
T ss_pred CCccEEEECCCC
Confidence 468999999884
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.043 Score=44.52 Aligned_cols=113 Identities=11% Similarity=0.072 Sum_probs=69.3
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC------CCeEEEEEeeCCCHHHHHHHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
|+.++|.|+|+ |.+|..++..|+..|. +|++.++++++.+....++.+. ...+. ..+ +.+.
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~--~t~--d~~a------- 70 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVR--GTN--DYKD------- 70 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE--EES--CGGG-------
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEE--EcC--CHHH-------
Confidence 34567888995 9999999999999987 9999999988776555555432 22222 111 1221
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
+ ..-|+||..+|.... ...+..++ +..|.--...+.+.+ .+. +.+.++++|.
T Consensus 71 ----~-~~aDvVIi~ag~p~k---~G~~R~dl---~~~N~~i~~~i~~~i----~~~~p~a~vivvtN 123 (321)
T 3p7m_A 71 ----L-ENSDVVIVTAGVPRK---PGMSRDDL---LGINIKVMQTVGEGI----KHNCPNAFVICITN 123 (321)
T ss_dssp ----G-TTCSEEEECCSCCCC---TTCCHHHH---HHHHHHHHHHHHHHH----HHHCTTCEEEECCS
T ss_pred ----H-CCCCEEEEcCCcCCC---CCCCHHHH---HHHhHHHHHHHHHHH----HHHCCCcEEEEecC
Confidence 1 246999999986422 22344433 445555444444444 433 4456666665
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0021 Score=53.14 Aligned_cols=79 Identities=16% Similarity=0.257 Sum_probs=52.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|++|||+|+ |++|...+..+...|+ +|+.+++++++++... ++.. .. ..|..+ .+++.+.+.+. .+
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa---~~---vi~~~~~~~~~~~~v~~~---~~ 258 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGA---TE---CINPQDFSKPIQEVLIEM---TD 258 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTC---SE---EECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCC---ce---EeccccccccHHHHHHHH---hC
Confidence 4789999996 9999999888888899 8999999988776543 3321 11 134332 12233333332 22
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.++|.
T Consensus 259 ~g~D~vid~~g~ 270 (373)
T 2fzw_A 259 GGVDYSFECIGN 270 (373)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCc
Confidence 468999999883
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0035 Score=51.19 Aligned_cols=77 Identities=23% Similarity=0.272 Sum_probs=51.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC--CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.|++|+|+|+ |++|...+..+... |++|+.+++++++++... ++.. .. ..|..+. .+..+++.+ +
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa---~~---vi~~~~~---~~~~~~~~~--g 236 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGA---DY---VSEMKDA---ESLINKLTD--G 236 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTC---SE---EECHHHH---HHHHHHHHT--T
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCC---CE---Eeccccc---hHHHHHhhc--C
Confidence 6889999999 89999998888788 999999999988765443 3321 11 1232220 122333332 2
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
..+|+++.++|.
T Consensus 237 ~g~D~vid~~g~ 248 (344)
T 2h6e_A 237 LGASIAIDLVGT 248 (344)
T ss_dssp CCEEEEEESSCC
T ss_pred CCccEEEECCCC
Confidence 368999999883
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0067 Score=48.84 Aligned_cols=44 Identities=18% Similarity=0.132 Sum_probs=36.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~ 62 (218)
++|.|+|| |.+|..++..|+..|. +|++.++++++++....++.
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~ 46 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIA 46 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhh
Confidence 36889998 9999999999999998 99999999887665444443
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0038 Score=51.67 Aligned_cols=74 Identities=18% Similarity=0.239 Sum_probs=52.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+|||+|+ |++|...+..+...|++|+++++++++++... ++.. .. ..|..+.+.+ +++. +.
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa---~~---vi~~~~~~~~----~~~~----~g 257 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGA---DE---VVNSRNADEM----AAHL----KS 257 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTC---SE---EEETTCHHHH----HTTT----TC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC---cE---EeccccHHHH----HHhh----cC
Confidence 4789999998 88999999888889999999999988876544 3321 11 2455554332 2221 36
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 258 ~Dvvid~~g~ 267 (369)
T 1uuf_A 258 FDFILNTVAA 267 (369)
T ss_dssp EEEEEECCSS
T ss_pred CCEEEECCCC
Confidence 8999999884
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.004 Score=52.10 Aligned_cols=78 Identities=28% Similarity=0.311 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|+|+ |++|...+..+...|+ +|+.+++++++++.. +++.. .. ..|..+.+-. +.+.+..++
T Consensus 213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa---~~---vi~~~~~~~~----~~i~~~t~g 280 (404)
T 3ip1_A 213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGA---DH---VIDPTKENFV----EAVLDYTNG 280 (404)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTC---SE---EECTTTSCHH----HHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCC---CE---EEcCCCCCHH----HHHHHHhCC
Confidence 5789999998 8999998888888999 899999998876544 33321 11 1344333322 223332223
Q ss_pred -cccEEEecCCC
Q 027816 95 -KLNILVNNVGT 105 (218)
Q Consensus 95 -~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 281 ~g~D~vid~~g~ 292 (404)
T 3ip1_A 281 LGAKLFLEATGV 292 (404)
T ss_dssp CCCSEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 68999999884
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0018 Score=53.73 Aligned_cols=79 Identities=15% Similarity=0.243 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|.+|+|+|+ |++|...+..+...|+ +|+.+++++++++.. +++ +.... .|..+ .+++.+.+.++ .+
T Consensus 193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~~~~~~~i~~~---~~ 261 (378)
T 3uko_A 193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF---GVNEF---VNPKDHDKPIQEVIVDL---TD 261 (378)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT---TCCEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCcEE---EccccCchhHHHHHHHh---cC
Confidence 4789999998 9999999888888899 899999998877633 333 21111 33321 12333333332 33
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.++|.
T Consensus 262 gg~D~vid~~g~ 273 (378)
T 3uko_A 262 GGVDYSFECIGN 273 (378)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 579999999883
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.043 Score=43.91 Aligned_cols=111 Identities=8% Similarity=-0.079 Sum_probs=67.3
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+|-|+|| |+||..++..|..++. ++++.+.+++..+....++.+. ......... .|.++ +
T Consensus 2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~-------~---- 67 (294)
T 2x0j_A 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-------L---- 67 (294)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG-------G----
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH-------h----
Confidence 5778895 9999999999998884 8999999987766655555431 111121222 12222 1
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss 154 (218)
..-|+||..||... -...+.+++ ++.|..= ++...+.+.+.. .+.++++|.
T Consensus 68 -~~aDvVvitAG~pr---kpGmtR~dL---l~~Na~I----~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 68 -KGSEIIVVTAGLAR---KPGMTRLDL---AHKNAGI----IKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp -TTCSEEEECCCCCC---CSSSCHHHH---HHHHHHH----HHHHHHHHHTTSTTCEEEECSS
T ss_pred -CCCCEEEEecCCCC---CCCCchHHH---HHHHHHH----HHHHHHHHHhcCCceEEEEecC
Confidence 24599999999742 223455554 4555443 344444445543 355666665
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.015 Score=48.79 Aligned_cols=42 Identities=19% Similarity=0.259 Sum_probs=37.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
+.+++|+|+|+ |.+|..+++.+...|++|++++++.+.++..
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 56899999996 8999999999999999999999998877654
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.055 Score=43.73 Aligned_cols=113 Identities=11% Similarity=0.106 Sum_probs=66.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC----CeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG----FVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..++|.|+|| |.+|..++..|+.+|. +|++.+.++++++....++.+.. ..+... .| +.++
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~a--------- 71 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYSD--------- 71 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGGG---------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHHH---------
Confidence 4468899998 9999999999998884 89999999877665444443211 122211 12 2222
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
+ ..-|+||..+|.... ...+.++ .+..|.--...+.+ .+.+. +.+.++++|.
T Consensus 72 --~-~~aDvVvi~ag~~~~---~g~~r~d---l~~~n~~i~~~i~~----~i~~~~p~a~viv~tN 124 (317)
T 3d0o_A 72 --C-HDADLVVICAGAAQK---PGETRLD---LVSKNLKIFKSIVG----EVMASKFDGIFLVATN 124 (317)
T ss_dssp --G-TTCSEEEECCCCCCC---TTCCHHH---HHHHHHHHHHHHHH----HHHHTTCCSEEEECSS
T ss_pred --h-CCCCEEEECCCCCCC---CCCcHHH---HHHHHHHHHHHHHH----HHHHhCCCcEEEEecC
Confidence 1 246999999987422 1233333 34445444434444 33444 3455666554
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0038 Score=52.10 Aligned_cols=79 Identities=27% Similarity=0.320 Sum_probs=52.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++|+|.|+ |++|...+..+...|+ +|+++++++++++.. +++ +.. ..|.++.+.+.+.+.+... +.
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~----~i~~~~~~~~~~~v~~~t~--g~ 253 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ---GFE----IADLSLDTPLHEQIAALLG--EP 253 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCE----EEETTSSSCHHHHHHHHHS--SS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc---CCc----EEccCCcchHHHHHHHHhC--CC
Confidence 4789999995 9999998887778998 799999988876544 333 222 2354443322222222211 12
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 254 g~Dvvid~~G~ 264 (398)
T 1kol_A 254 EVDCAVDAVGF 264 (398)
T ss_dssp CEEEEEECCCT
T ss_pred CCCEEEECCCC
Confidence 68999999985
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0019 Score=53.40 Aligned_cols=81 Identities=22% Similarity=0.257 Sum_probs=52.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++|+|+|+ |++|...+..+...|+ +|+++++++++.+. .+++.. .. ..|.++.+- .+.+.+.....++
T Consensus 182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~lGa---~~---vi~~~~~~~-~~~i~~~~~~~~g 252 (370)
T 4ej6_A 182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEVGA---TA---TVDPSAGDV-VEAIAGPVGLVPG 252 (370)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHHTC---SE---EECTTSSCH-HHHHHSTTSSSTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHcCC---CE---EECCCCcCH-HHHHHhhhhccCC
Confidence 4789999998 8999999888888999 89999998877653 333321 11 134443322 2222221112335
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 253 g~Dvvid~~G~ 263 (370)
T 4ej6_A 253 GVDVVIECAGV 263 (370)
T ss_dssp CEEEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 78999999873
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0017 Score=53.50 Aligned_cols=75 Identities=15% Similarity=0.118 Sum_probs=51.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+|+ |++|...+..+...|++|+.+++++++++...+ +.. ... .|..+.++ +.+++. +.
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa---~~v---~~~~~~~~---~~~~~~----~~ 243 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGA---DHY---IATLEEGD---WGEKYF----DT 243 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC---SEE---EEGGGTSC---HHHHSC----SC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC---CEE---EcCcCchH---HHHHhh----cC
Confidence 4789999999 999999988888899999999998887665433 321 111 34332201 122221 36
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 244 ~D~vid~~g~ 253 (360)
T 1piw_A 244 FDLIVVCASS 253 (360)
T ss_dssp EEEEEECCSC
T ss_pred CCEEEECCCC
Confidence 8999999885
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.029 Score=45.24 Aligned_cols=44 Identities=14% Similarity=-0.055 Sum_probs=36.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~ 62 (218)
++|.|+|| |.+|..++..++..|. +|++.++++++++....++.
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~ 47 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLY 47 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHH
Confidence 47899999 9999999999999996 89999999887765555544
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0089 Score=48.48 Aligned_cols=115 Identities=10% Similarity=0.024 Sum_probs=64.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++|.|+|+ |.+|..++..|+..|. +|++.+.++++++....++.+..... ..+.+.. .+ .+.+ ..
T Consensus 8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~--~~~~i~~-~~--------~~a~-~~ 74 (318)
T 1y6j_A 8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFM--GQMSLYA-GD--------YSDV-KD 74 (318)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCT--TCEEEC---C--------GGGG-TT
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhc--CCeEEEE-CC--------HHHh-CC
Confidence 57888998 9999999999999986 89999999877665555554432100 0111111 00 1112 35
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS 154 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss 154 (218)
-|+||..+|.... ...+.+ +.+..|+--...+++.+.++ .+.+.++++|.
T Consensus 75 aDvVii~~g~p~k---~g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN 124 (318)
T 1y6j_A 75 CDVIVVTAGANRK---PGETRL---DLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN 124 (318)
T ss_dssp CSEEEECCCC---------CHH---HHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred CCEEEEcCCCCCC---CCcCHH---HHHHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence 6999999986321 122222 34566666555555555433 34455666544
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0068 Score=49.52 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=31.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence 356889999987 7999999999999997 78888764
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0048 Score=51.16 Aligned_cols=80 Identities=24% Similarity=0.264 Sum_probs=53.6
Q ss_pred CCcEEEEec-CCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTG-GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItG-a~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|.| |+|++|...+..+...|++|+.+++++++++... ++.. .. ..|..+.+-.+++.+.+.. .
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa---~~---~~~~~~~~~~~~v~~~t~~---~ 239 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGA---VH---VCNAASPTFMQDLTEALVS---T 239 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTC---SC---EEETTSTTHHHHHHHHHHH---H
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCC---cE---EEeCCChHHHHHHHHHhcC---C
Confidence 467889997 8999999998888888999999999888766543 3321 11 1344443333333332221 2
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.+.|.
T Consensus 240 g~d~v~d~~g~ 250 (379)
T 3iup_A 240 GATIAFDATGG 250 (379)
T ss_dssp CCCEEEESCEE
T ss_pred CceEEEECCCc
Confidence 58999999884
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.72 E-value=0.029 Score=45.24 Aligned_cols=111 Identities=15% Similarity=0.074 Sum_probs=68.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++|.|+|| |.+|..++..++..+ .+|++.++++++++....++.+.. ..+... .| +.++ +
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~ 65 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------L 65 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------h
Confidence 36889998 999999999999988 489999999888776666664431 112211 12 2222 1
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-CCCCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~~~~~iv~~ss 154 (218)
..-|+||..+|.... ...+.++ .+..|.--...+.+.+ .+ .+.+.++++|.
T Consensus 66 -~~aD~Vii~ag~~~~---~g~~r~d---l~~~n~~i~~~i~~~i----~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 66 -EGARAVVLAAGVAQR---PGETRLQ---LLDRNAQVFAQVVPRV----LEAAPEAVLLVATN 117 (310)
T ss_dssp -TTEEEEEECCCCCCC---TTCCHHH---HHHHHHHHHHHHHHHH----HHHCTTCEEEECSS
T ss_pred -CCCCEEEECCCCCCC---CCcCHHH---HHHhhHHHHHHHHHHH----HHHCCCcEEEEecC
Confidence 356999999987422 1234333 3445554444444443 33 34467777665
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0027 Score=52.24 Aligned_cols=75 Identities=15% Similarity=0.206 Sum_probs=51.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+|+|+|+ |++|...+..+...|++|+++++++++++...+++.. .. ..|..+.+.+. +.. +.
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa---~~---vi~~~~~~~~~-------~~~-~g 244 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA---DD---YVIGSDQAKMS-------ELA-DS 244 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC---SC---EEETTCHHHHH-------HST-TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC---ce---eeccccHHHHH-------Hhc-CC
Confidence 5789999995 9999999988888899999999988776554423321 11 13544443222 222 36
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 245 ~D~vid~~g~ 254 (357)
T 2cf5_A 245 LDYVIDTVPV 254 (357)
T ss_dssp EEEEEECCCS
T ss_pred CCEEEECCCC
Confidence 8999999884
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0048 Score=50.92 Aligned_cols=78 Identities=15% Similarity=0.257 Sum_probs=51.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++|+|+|+ |++|...+..+...|+ +|+.+++++++++.. +++.. .. ..|..+.+- .+++.+..++
T Consensus 190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa---~~---vi~~~~~~~----~~~~~~~~~g 257 (371)
T 1f8f_A 190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGA---TH---VINSKTQDP----VAAIKEITDG 257 (371)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTC---SE---EEETTTSCH----HHHHHHHTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCC---CE---EecCCccCH----HHHHHHhcCC
Confidence 4689999995 8999998887777898 699999988876544 33321 11 134433222 2222222224
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 258 g~D~vid~~g~ 268 (371)
T 1f8f_A 258 GVNFALESTGS 268 (371)
T ss_dssp CEEEEEECSCC
T ss_pred CCcEEEECCCC
Confidence 68999999883
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.11 Score=42.00 Aligned_cols=114 Identities=15% Similarity=0.107 Sum_probs=67.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhC-C--CeEEEecCChhhHHHHHHHhhhCCC--eEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAGL-G--AVVHTCSRNEVELNKCLKEWQSKGF--VVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~-G--~~V~~~~r~~~~~~~~~~~~~~~~~--~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++|.|+||+|.+|..++..|.++ + .++++.+.++ ..+....++.+... .+..... -.+.+++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~-~~~~~~~----------- 67 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSG-EDATPAL----------- 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECS-SCCHHHH-----------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecC-CCcHHHh-----------
Confidence 36789999999999999999876 5 4899999987 44444445544322 2221111 1122221
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss 154 (218)
...|++|..||.... ...+.++ .++.|..-...+.+.+.. ..+.+.++++|.
T Consensus 68 -~~aDivii~ag~~rk---pG~~R~d---ll~~N~~I~~~i~~~i~~---~~p~a~vlvvtN 119 (312)
T 3hhp_A 68 -EGADVVLISAGVARK---PGMDRSD---LFNVNAGIVKNLVQQVAK---TCPKACIGIITN 119 (312)
T ss_dssp -TTCSEEEECCSCSCC---TTCCHHH---HHHHHHHHHHHHHHHHHH---HCTTSEEEECSS
T ss_pred -CCCCEEEEeCCCCCC---CCCCHHH---HHHHHHHHHHHHHHHHHH---HCCCcEEEEecC
Confidence 356999999996421 2344433 355666555555554432 234456777765
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.032 Score=45.40 Aligned_cols=112 Identities=12% Similarity=-0.011 Sum_probs=67.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC-----CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK-----GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
..++|.|+|+ |.+|..++..++..|. +|++.+.++++.+....++.+. ...+.. ..|.. +
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-t~d~~---~-------- 86 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS-GKDYS---V-------- 86 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE-ESSSC---S--------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE-cCCHH---H--------
Confidence 3468899999 9999999999999996 8999999998877665555432 112211 12321 1
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-CCCCeEEEEec
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISS 154 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~~~~~iv~~ss 154 (218)
+ ..-|+||..||...... .+.++ .+..|..-...+.+.+ .+ .+.+.++++|.
T Consensus 87 ---~-~daDiVIitaG~p~kpG---~tR~d---ll~~N~~I~k~i~~~I----~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 87 ---S-AGSKLVVITAGARQQEG---ESRLN---LVQRNVNIFKFIIPNI----VKHSPDCLKELHPE 139 (330)
T ss_dssp ---C-SSCSEEEECCSCCCCSS---CCTTG---GGHHHHHHHHHHHHHH----HHHCTTCEEEECSS
T ss_pred ---h-CCCCEEEEeCCCCCCCC---CCHHH---HHHhhHHHHHHHHHHH----HhhCCCceEEeCCC
Confidence 1 35699999999753221 22211 2334443333333333 33 34456777775
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0032 Score=52.09 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=51.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|++|+|+|+ |++|...+..+...|+ +|+.+++++++++... ++.. ... .|..+ .+++.+.+.+. .+
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa---~~v---i~~~~~~~~~~~~i~~~---t~ 259 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGA---TEC---LNPKDYDKPIYEVICEK---TN 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTC---SEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCC---cEE---EecccccchHHHHHHHH---hC
Confidence 4789999996 9999998888777898 8999999988776543 3321 111 23332 12233333322 22
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.++|.
T Consensus 260 gg~Dvvid~~g~ 271 (373)
T 1p0f_A 260 GGVDYAVECAGR 271 (373)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 478999999884
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0036 Score=53.48 Aligned_cols=75 Identities=16% Similarity=0.226 Sum_probs=58.3
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.++++|.|+ |-+|+.+|+.|.++|++|++++++++..+...+.+ .+..+..|.++.+.++++-- ..-
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-------~~a 69 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-------QDA 69 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-------TTC
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-------CcC
Confidence 467888887 68999999999999999999999999887765544 36678899999988766421 245
Q ss_pred cEEEecCC
Q 027816 97 NILVNNVG 104 (218)
Q Consensus 97 d~vv~~ag 104 (218)
|+++...+
T Consensus 70 d~~ia~t~ 77 (461)
T 4g65_A 70 DMLVAVTN 77 (461)
T ss_dssp SEEEECCS
T ss_pred CEEEEEcC
Confidence 77776543
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0027 Score=51.81 Aligned_cols=43 Identities=12% Similarity=-0.181 Sum_probs=36.3
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~ 60 (218)
.++|.|.|| |.+|..++..|+..|. +|++.+++++.++....+
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~ 52 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALD 52 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHH
Confidence 357899998 9999999999999997 999999998877664333
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0039 Score=52.03 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=51.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++... ++ +.. .+|..+.+.+.+.+.+. .++
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~----~i~~~~~~~~~~~~~~~---~~g 252 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DA---GFE----TIDLRNSAPLRDQIDQI---LGK 252 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TT---TCE----EEETTSSSCHHHHHHHH---HSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hc---CCc----EEcCCCcchHHHHHHHH---hCC
Confidence 4789999997 9999998887777899 8999999988765432 22 222 23544422212222222 223
Q ss_pred -cccEEEecCCC
Q 027816 95 -KLNILVNNVGT 105 (218)
Q Consensus 95 -~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 253 ~g~Dvvid~~g~ 264 (398)
T 2dph_A 253 PEVDCGVDAVGF 264 (398)
T ss_dssp SCEEEEEECSCT
T ss_pred CCCCEEEECCCC
Confidence 58999999885
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.00098 Score=54.87 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=30.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.|.+|||+||+|++|...+..+...|++++.+.++.
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~ 202 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR 202 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence 578999999999999998887777899877776544
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0051 Score=50.87 Aligned_cols=47 Identities=23% Similarity=0.303 Sum_probs=41.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
+++||+|+|.|+ |.+|..+|+.|.+.|++|++.+++.++++...+++
T Consensus 170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 688999999997 77999999999999999999999988777666553
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.024 Score=46.98 Aligned_cols=45 Identities=20% Similarity=0.150 Sum_probs=39.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
.+.+++|+|.|+ |.+|..+++.+...|++|++.+|+.++++...+
T Consensus 181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 356789999998 799999999999999999999999988776543
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0031 Score=50.17 Aligned_cols=43 Identities=26% Similarity=0.453 Sum_probs=37.8
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL 54 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~ 54 (218)
..+++||+++|.|+++-+|+.++..|+++|++|.++.+....+
T Consensus 155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L 197 (285)
T 3p2o_A 155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDL 197 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence 3578999999999999999999999999999999998765433
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0048 Score=49.90 Aligned_cols=73 Identities=18% Similarity=0.237 Sum_probs=48.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+|+|+||+|++|...+..+...|++|+.+++++ +. +..+++.. .. ..|..+.+.+.+ .. ..
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~~~lGa---~~---~i~~~~~~~~~~-------~~-~g 215 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFLKALGA---EQ---CINYHEEDFLLA-------IS-TP 215 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHHHHHTC---SE---EEETTTSCHHHH-------CC-SC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHHHHcCC---CE---EEeCCCcchhhh-------hc-cC
Confidence 578999999999999999999989999998887543 33 33334322 11 234444332211 11 35
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 216 ~D~v~d~~g 224 (321)
T 3tqh_A 216 VDAVIDLVG 224 (321)
T ss_dssp EEEEEESSC
T ss_pred CCEEEECCC
Confidence 899999887
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0044 Score=50.76 Aligned_cols=78 Identities=18% Similarity=0.186 Sum_probs=51.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|+|+ |++|...+..+...|+ +|+.+++++++++.. +++.. .. ..|..+.+-. +++.+..++
T Consensus 166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa---~~---vi~~~~~~~~----~~v~~~t~g 233 (352)
T 3fpc_A 166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYGA---TD---IINYKNGDIV----EQILKATDG 233 (352)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHTC---CE---EECGGGSCHH----HHHHHHTTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCC---ce---EEcCCCcCHH----HHHHHHcCC
Confidence 4788999995 9999998888888899 799999988776543 33322 11 1333332222 233333323
Q ss_pred -cccEEEecCCC
Q 027816 95 -KLNILVNNVGT 105 (218)
Q Consensus 95 -~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 234 ~g~D~v~d~~g~ 245 (352)
T 3fpc_A 234 KGVDKVVIAGGD 245 (352)
T ss_dssp CCEEEEEECSSC
T ss_pred CCCCEEEECCCC
Confidence 59999999884
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.022 Score=46.33 Aligned_cols=113 Identities=6% Similarity=0.009 Sum_probs=68.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++|.|+|| |.+|..++..++..+. +|++.++++++++....++.+.. ..+... .| +.++
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a----------- 73 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD----------- 73 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH-----------
Confidence 468999999 9999999999998885 89999999888876666654431 122211 12 2222
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS 154 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss 154 (218)
+ ..-|+||..+|.... ...+.++ .+..|.--...+.+.+..+ .+.+.++++|.
T Consensus 74 ~-~~aDvVii~ag~~~k---~g~~R~d---l~~~n~~i~~~i~~~i~~~---~p~a~iiv~tN 126 (326)
T 2zqz_A 74 A-KDADLVVITAGAPQK---PGETRLD---LVNKNLKILKSIVDPIVDS---GFNGIFLVAAN 126 (326)
T ss_dssp G-GGCSEEEECCCCC--------CHHH---HHHHHHHHHHHHHHHHHHH---TCCSEEEECSS
T ss_pred h-CCCCEEEEcCCCCCC---CCCCHHH---HHHHHHHHHHHHHHHHHHH---CCCeEEEEeCC
Confidence 1 245999999986421 1223332 3455555444444444222 34567777765
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.028 Score=45.51 Aligned_cols=43 Identities=14% Similarity=0.031 Sum_probs=36.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~ 61 (218)
++|.|.|+ |.+|..++..|++.|. +|++.+++++.++....++
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l 45 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDL 45 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHH
Confidence 36789998 9999999999999998 9999999988776654443
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0027 Score=52.17 Aligned_cols=75 Identities=16% Similarity=0.238 Sum_probs=49.5
Q ss_pred CCcEEEEecCCCchHHHH-HHHH-HhCCCe-EEEecCChh---hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQAT-VEEL-AGLGAV-VHTCSRNEV---ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~l-a~~l-~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.+++|+|+|| |++|... +..+ ...|++ |+.++++++ +++.. +++ +. ..+ |..+. ++.+ +.+.
T Consensus 172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l---Ga--~~v--~~~~~-~~~~-i~~~- 239 (357)
T 2b5w_A 172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL---DA--TYV--DSRQT-PVED-VPDV- 239 (357)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT---TC--EEE--ETTTS-CGGG-HHHH-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc---CC--ccc--CCCcc-CHHH-HHHh-
Confidence 3489999999 9999998 7666 568997 999999887 65543 333 21 112 44332 2333 3333
Q ss_pred hhcCCcccEEEecCCC
Q 027816 90 SKFNGKLNILVNNVGT 105 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~ 105 (218)
. +.+|+++.+.|.
T Consensus 240 --~-gg~Dvvid~~g~ 252 (357)
T 2b5w_A 240 --Y-EQMDFIYEATGF 252 (357)
T ss_dssp --S-CCEEEEEECSCC
T ss_pred --C-CCCCEEEECCCC
Confidence 2 478999999883
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.09 Score=43.52 Aligned_cols=116 Identities=10% Similarity=-0.005 Sum_probs=65.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC--e---EEEecC----ChhhHHHHHHHhhhCCC-eEEEEEeeCCCHHHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA--V---VHTCSR----NEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~--~---V~~~~r----~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~ 86 (218)
..+|.|+||+|.||.+++..++..+. + +++.+. +++.++...-++.+... ....+. +... + .+
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~~-~----y~ 104 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGID-P----YE 104 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EESC-H----HH
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--EecC-C----HH
Confidence 45789999999999999999998874 2 666433 44445655556654431 111111 1110 1 11
Q ss_pred HHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh--CCCCeEEEEec
Q 027816 87 EVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA--SGVGSIVFISS 154 (218)
Q Consensus 87 ~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~--~~~~~iv~~ss 154 (218)
. + ..-|++|..||... -...+..++ ++.|.. +++...+.+.+ .+.+.++++|.
T Consensus 105 ~----~-~daDvVVitag~pr---kpG~tR~DL---l~~N~~----I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 105 V----F-EDVDWALLIGAKPR---GPGMERAAL---LDINGQ----IFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp H----T-TTCSEEEECCCCCC---CTTCCHHHH---HHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred H----h-CCCCEEEEcCCCCC---CCCCCHHHH---HHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence 1 2 35699999988632 123444443 445543 33444444454 34466777765
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.09 Score=45.55 Aligned_cols=150 Identities=12% Similarity=0.020 Sum_probs=88.5
Q ss_pred cCCcEEEEecCCC-chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTR-GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~-giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
..|...++....+ +++..++..|.++|.+|+.+...... +.+++.+.+.+.....+
T Consensus 48 ~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~~-----------------------~~~~~~~~l~~~~~~~~ 104 (525)
T 3qp9_A 48 LSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPLG-----------------------DRQRLAATLGEALAAAG 104 (525)
T ss_dssp CCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTTC-----------------------CHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCCC-----------------------CHHHHHHHHHhhhhccc
Confidence 3455544444333 28899999999999987766432210 45566556553332223
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHH-hhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMT-TNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~-~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+.++.|+|..+...... .+.. ... ..+.+.+.++|++.. .....++++++..+-... +....-...++
T Consensus 105 ~~~~~v~~l~~~~~~~~-~~~~------~~~~~g~~~~l~l~qal~~---~~~~~~l~~vT~ga~~~~-~~~~~~~p~~a 173 (525)
T 3qp9_A 105 GAVDGVLSLLAWDESAH-PGHP------APFTRGTGATLTLVQALED---AGVAAPLWCVTHGAVSVG-RADHVTSPAQA 173 (525)
T ss_dssp SCCSEEEECGGGCCCBC-TTSC------TTCBHHHHHHHHHHHHHHH---TTCCSCEEEEEESCCCCB-TTBCCSCHHHH
T ss_pred CCCCeEEEcccCCCCcc-cccc------ccccchHHHHHHHHHHHHh---cCCCCcEEEEECCCEeCC-CCCCCCCHHHH
Confidence 57899999877543211 1100 011 345677788887643 222356777765432221 12233467889
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecc
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPW 198 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG 198 (218)
++.+|.++++.|++....+...+-+.
T Consensus 174 ~l~Gl~r~~~~E~p~~~~~~vDl~~~ 199 (525)
T 3qp9_A 174 MVWGMGRVAALEHPERWGGLIDLPSD 199 (525)
T ss_dssp HHHHHHHHHHHHSTTTEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCCceEEEEEcCCC
Confidence 99999999999987665666666543
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.006 Score=51.34 Aligned_cols=60 Identities=23% Similarity=0.204 Sum_probs=45.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 83 (218)
++.|+|.|+ |.+|..+++.|.++|..|++++++++..+...+ .+ +..+..|.++.+.+++
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g--~~vi~GDat~~~~L~~ 63 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG--MKVFYGDATRMDLLES 63 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT--CCCEESCTTCHHHHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC--CeEEEcCCCCHHHHHh
Confidence 346889997 789999999999999999999999987665432 11 3445677777666544
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.18 Score=40.96 Aligned_cols=40 Identities=15% Similarity=-0.056 Sum_probs=35.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCL 58 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~ 58 (218)
++|.|.|| |.+|..+|..|+..|. +|++.+++++.++...
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~ 55 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKA 55 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 57899998 9999999999999998 9999999988776533
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.45 E-value=0.019 Score=46.51 Aligned_cols=111 Identities=9% Similarity=0.037 Sum_probs=65.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++|.|+|| |.+|..++..++..+. +|++.++++++++....++.+.. ..+... .| +.++ +
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~a-----------~ 70 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYSD-----------C 70 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGGG-----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHHH-----------h
Confidence 58899998 9999999999998885 89999999888876666654431 122211 12 2221 2
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|+||..+|..... ..+. .+.+..|.--. +...+.+.+. +.+.++++|.
T Consensus 71 -~~aDvVii~ag~~~~~---g~~R---~dl~~~n~~i~----~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 71 -KDADLVVITAGAPQKP---GESR---LDLVNKNLNIL----SSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp -TTCSEEEECCCC----------------CHHHHHHHH----HHHHHHHHHTTCCSEEEECSS
T ss_pred -CCCCEEEECCCCCCCC---CCCH---HHHHHHHHHHH----HHHHHHHHHhCCCeEEEEeCC
Confidence 3469999999864211 1111 12344454444 4444444443 4466777665
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0041 Score=49.32 Aligned_cols=44 Identities=27% Similarity=0.289 Sum_probs=38.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
++++|+++|.|+ |++|+++++.|.+.|++|.+.+|+.++.++..
T Consensus 126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~ 169 (275)
T 2hk9_A 126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLA 169 (275)
T ss_dssp TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHT
T ss_pred CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 567899999996 79999999999999999999999987766544
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0023 Score=51.92 Aligned_cols=82 Identities=17% Similarity=0.137 Sum_probs=53.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++.||+++|.|++.-+|+.+|+.|++.|++|.+++|+.....+..+.+.... .....+..++.+++++.+.+
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~--~~~t~~~~t~~~~L~e~l~~------ 245 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK--HHVEDLGEYSEDLLKKCSLD------ 245 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC--CEEEEEEECCHHHHHHHHHH------
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc--ccccccccccHhHHHHHhcc------
Confidence 6789999999999999999999999999999999887433211111111100 01111111334565555543
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
-|+||.+.|.
T Consensus 246 --ADIVIsAtg~ 255 (320)
T 1edz_A 246 --SDVVITGVPS 255 (320)
T ss_dssp --CSEEEECCCC
T ss_pred --CCEEEECCCC
Confidence 4999998885
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0065 Score=48.07 Aligned_cols=41 Identities=12% Similarity=0.183 Sum_probs=36.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~ 55 (218)
++||+++|.|+++-+|+.+++.|.+.|++|.++.+....++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~ 188 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG 188 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH
Confidence 78999999999999999999999999999999977544333
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.044 Score=44.30 Aligned_cols=112 Identities=13% Similarity=0.111 Sum_probs=64.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++|.|+|+ |.+|..++..++..|. +|++.++++++.+....++.+. .........| +.++
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~a----------- 66 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYGP----------- 66 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSGG-----------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHHH-----------
Confidence 35788997 9999999999999886 8999999998766554444321 1112211122 1111
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
+ ..-|++|.++|..... ..+. ...++.|.--. +...+.+.+. +.+.++++|.
T Consensus 67 ~-~~aDvVii~ag~~~kp---G~~R---~dl~~~N~~i~----~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 67 T-EDSDVCIITAGLPRSP---GMSR---DDLLAKNTEIV----GGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp G-TTCSEEEECCCC----------C---HHHHHHHHHHH----HHHHHHHHTTCTTCEEEECCS
T ss_pred h-CCCCEEEECCCCCCCC---CCCH---HHHHHhhHHHH----HHHHHHHHHhCCCcEEEecCC
Confidence 1 3469999999964211 1222 23345555444 4444444444 4456677775
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0077 Score=48.31 Aligned_cols=43 Identities=26% Similarity=0.407 Sum_probs=38.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
.++.||+++|.|+ |.||+.+++.+...|++|++.+|+.++.+.
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~ 195 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR 195 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4678999999996 899999999999999999999999876543
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.005 Score=49.74 Aligned_cols=41 Identities=32% Similarity=0.386 Sum_probs=36.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
|+ |+|+||+|++|...+..+...|++|+.+++++++.+...
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~ 188 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK 188 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 45 999999999999999888899999999999988776553
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.072 Score=42.85 Aligned_cols=110 Identities=14% Similarity=0.059 Sum_probs=65.4
Q ss_pred EEEEecCCCchHHHHHHHHHhC--CCeEEEecCChhhHHHHHHHhhhC------CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 19 TALVTGGTRGIGQATVEELAGL--GAVVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+|.|.|+ |.+|..++..|++. |.+|++.+++++..+....++.+. ...+. .. ++.++
T Consensus 2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~--~t--~d~~~---------- 66 (310)
T 1guz_A 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT--GS--NDYAD---------- 66 (310)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEE--EE--SCGGG----------
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEE--EC--CCHHH----------
Confidence 5788998 99999999999985 679999999988776544333221 11121 11 12211
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEec
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS 154 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss 154 (218)
+ ..-|+||.+++.... ...+.. ..++.|..-...+++.+.++ .+.+.+++++.
T Consensus 67 -l-~~aDvViiav~~p~~---~g~~r~---dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tN 119 (310)
T 1guz_A 67 -T-ANSDIVIITAGLPRK---PGMTRE---DLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSN 119 (310)
T ss_dssp -G-TTCSEEEECCSCCCC---TTCCHH---HHHHHHHHHHHHHHHHHHHH---CSSCEEEECCS
T ss_pred -H-CCCCEEEEeCCCCCC---CCCCHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcC
Confidence 1 346999999985321 122222 34455655555555555443 23456666654
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.031 Score=43.67 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=55.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHHHHHHHhh--------hC--CCeEEEEEeeCCCHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQ--------SK--GFVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~--------~~--~~~v~~~~~D~~~~~~~~~~ 84 (218)
.+++|.|.|+ |.+|..+++.|.+.|++ |.+.+|+++..+...+.+. +. ..++..+ ......+.++
T Consensus 9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~---av~~~~~~~v 84 (266)
T 3d1l_A 9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIV---SLKDSAFAEL 84 (266)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEE---CCCHHHHHHH
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEE---ecCHHHHHHH
Confidence 3467888997 99999999999999998 8899999888776655421 11 1122211 2234466777
Q ss_pred HHHHHhhcCCcccEEEecCCC
Q 027816 85 IQEVGSKFNGKLNILVNNVGT 105 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~ 105 (218)
++++.... .+=.+++++.+.
T Consensus 85 ~~~l~~~~-~~~~ivv~~s~~ 104 (266)
T 3d1l_A 85 LQGIVEGK-REEALMVHTAGS 104 (266)
T ss_dssp HHHHHTTC-CTTCEEEECCTT
T ss_pred HHHHHhhc-CCCcEEEECCCC
Confidence 87776544 122456666553
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0033 Score=51.01 Aligned_cols=39 Identities=31% Similarity=0.352 Sum_probs=34.5
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
+|+|+||+|++|...+..+...|++|+.+++++++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~ 191 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL 191 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 799999999999999988888999999999987776544
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0068 Score=48.20 Aligned_cols=44 Identities=30% Similarity=0.319 Sum_probs=38.1
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~ 55 (218)
..+++||+++|.|.++-.|+.++..|++.|++|.++.+....++
T Consensus 156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~ 199 (286)
T 4a5o_A 156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA 199 (286)
T ss_dssp TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH
Confidence 35789999999999999999999999999999999977554443
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.039 Score=43.66 Aligned_cols=162 Identities=14% Similarity=0.182 Sum_probs=92.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEE-EecCChhhH--HHH----------------HHHhhhCCCeEEEEEeeC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVH-TCSRNEVEL--NKC----------------LKEWQSKGFVVSGSVCDA 75 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~-~~~r~~~~~--~~~----------------~~~~~~~~~~v~~~~~D~ 75 (218)
+..+|.|+|++|.+|+.+++.+.+. |.+|+ +++++.+.. ... .+++.. ..++ ..|.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~~Dv---VIDf 79 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DFDV---FIDF 79 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SCSE---EEEC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-CCCE---EEEc
Confidence 3458999999999999999998854 66765 555554220 000 001101 1222 3688
Q ss_pred CCHHHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHh----------hh----hhHHHHHHHHhHHh
Q 027816 76 ASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT----------NF----ESTYHLCQLVYPLL 141 (218)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~----------nv----~~~~~~~~~~~~~l 141 (218)
+.++...+.+..+.+. .+++|+-..|+ +.++..+..+. |. .-.+.+++.+.++|
T Consensus 80 t~p~~~~~~~~~a~~~---G~~vVigTtG~---------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~ 147 (273)
T 1dih_A 80 TRPEGTLNHLAFCRQH---GKGMVIGTTGF---------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVM 147 (273)
T ss_dssp SCHHHHHHHHHHHHHT---TCEEEECCCCC---------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhC---CCCEEEECCCC---------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhc
Confidence 9999988888888775 35677766653 23332222111 11 11233444444444
Q ss_pred HhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhc---------------cCCeEEEEeecc
Q 027816 142 KASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA---------------KDNIRTNSVAPW 198 (218)
Q Consensus 142 ~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~---------------~~gv~v~~v~PG 198 (218)
... -.|=.+ -.++..+-..||+.++...+.+.+.+...+. ..+|.+.++.-|
T Consensus 148 ~~~--~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g 214 (273)
T 1dih_A 148 GDY--TDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAG 214 (273)
T ss_dssp TTT--SEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECT
T ss_pred CCC--CCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCC
Confidence 211 122111 1234445567899999999888776654321 347889988844
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0086 Score=47.97 Aligned_cols=40 Identities=20% Similarity=0.216 Sum_probs=36.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.+++||+++|.|+++-+|+.++..|++.|++|.++.|...
T Consensus 161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~ 200 (300)
T 4a26_A 161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS 200 (300)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5789999999999999999999999999999999987543
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0087 Score=47.00 Aligned_cols=47 Identities=32% Similarity=0.368 Sum_probs=39.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
.+++| +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+...+.+
T Consensus 113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~ 159 (263)
T 2d5c_A 113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF 159 (263)
T ss_dssp CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 35678 8999997 77999999999999999999999988777666554
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.22 E-value=0.025 Score=49.61 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=31.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D 359 (615)
T 4gsl_A 323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG 359 (615)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 357789999987 6999999999999997 79998875
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0066 Score=48.27 Aligned_cols=40 Identities=28% Similarity=0.381 Sum_probs=35.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
..+++||+++|.|+++-+|+.++..|.++|++|.++.|..
T Consensus 156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t 195 (285)
T 3l07_A 156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT 195 (285)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence 3578999999999999999999999999999999887654
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.03 Score=44.38 Aligned_cols=82 Identities=13% Similarity=0.100 Sum_probs=56.3
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC---eEEEecCChhhHHHHHHHhh----------hCCCeEEEEEeeCCCHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA---VVHTCSRNEVELNKCLKEWQ----------SKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r~~~~~~~~~~~~~----------~~~~~v~~~~~D~~~~~~~~~ 83 (218)
.+++.|.|+ |-+|.++++.|++.|+ +|.+.+|++++.+...+.+. -...++..+.+ .++.+++
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~ 78 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM 78 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence 456788887 8999999999999998 89999999988776655321 01234444443 3466777
Q ss_pred HHHHHHhh-cCCccc-EEEecCC
Q 027816 84 LIQEVGSK-FNGKLN-ILVNNVG 104 (218)
Q Consensus 84 ~~~~~~~~-~~~~id-~vv~~ag 104 (218)
+++++... + +.+ +++.+++
T Consensus 79 vl~~l~~~~l--~~~~iiiS~~a 99 (280)
T 3tri_A 79 VCEELKDILS--ETKILVISLAV 99 (280)
T ss_dssp HHHHHHHHHH--TTTCEEEECCT
T ss_pred HHHHHHhhcc--CCCeEEEEecC
Confidence 77777665 4 224 6676654
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.027 Score=43.86 Aligned_cols=77 Identities=16% Similarity=0.111 Sum_probs=54.9
Q ss_pred EEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 19 TALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
+|.|.||+|.+|+.+++.+.+. +.+|+.+....+.++.... ...+ +..|.+.++...+.+..+.+. .++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~---g~~ 71 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN---GIH 71 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT---TCE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc---CCC
Confidence 6899999999999999999876 7887755433333333321 1223 347999999998888887774 467
Q ss_pred EEEecCCC
Q 027816 98 ILVNNVGT 105 (218)
Q Consensus 98 ~vv~~ag~ 105 (218)
+|+...|+
T Consensus 72 ~VigTTG~ 79 (245)
T 1p9l_A 72 AVVGTTGF 79 (245)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 88877763
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.17 E-value=0.094 Score=42.31 Aligned_cols=75 Identities=19% Similarity=0.153 Sum_probs=50.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCC----eEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGF----VVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~----~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++|.|+|+ |.+|..++..++..|. +|++.+++++..+....++.+... .+... .| +.++
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~--~~~a---------- 71 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG--DYDD---------- 71 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC--CGGG----------
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC--cHHH----------
Confidence 358899999 9999999999998874 899999998766544444433211 22222 12 1111
Q ss_pred hcCCcccEEEecCCCCC
Q 027816 91 KFNGKLNILVNNVGTNI 107 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~ 107 (218)
+ ..-|+||.++|...
T Consensus 72 -l-~~aDvViia~~~~~ 86 (316)
T 1ldn_A 72 -C-RDADLVVICAGANQ 86 (316)
T ss_dssp -T-TTCSEEEECCSCCC
T ss_pred -h-CCCCEEEEcCCCCC
Confidence 1 34699999998753
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.01 Score=48.89 Aligned_cols=43 Identities=16% Similarity=0.115 Sum_probs=35.8
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
+++++|.|.| .|.+|..+|+.|++.|++|.+.+|++++.+.+.
T Consensus 20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~ 62 (358)
T 4e21_A 20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE 62 (358)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 4567888887 689999999999999999999999988766543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.012 Score=46.99 Aligned_cols=43 Identities=26% Similarity=0.415 Sum_probs=37.6
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
.++.||+++|.|+ |.||+.+++.+...|++|++.+|+.++.+.
T Consensus 151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~ 193 (293)
T 3d4o_A 151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR 193 (293)
T ss_dssp SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 3678999999995 899999999999999999999999876543
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.02 Score=46.57 Aligned_cols=78 Identities=18% Similarity=0.241 Sum_probs=49.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+++|+|+ |++|...+..+... |++|+.+++++++++.. +++. .... .|..+ +..+++.+.+ .. .
T Consensus 171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lG---a~~~---i~~~~-~~~~~v~~~t-~g--~ 238 (345)
T 3jv7_A 171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVG---ADAA---VKSGA-GAADAIRELT-GG--Q 238 (345)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTT---CSEE---EECST-THHHHHHHHH-GG--G
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcC---CCEE---EcCCC-cHHHHHHHHh-CC--C
Confidence 4789999998 99999887766666 68999999998876644 3332 1111 23222 2222222222 21 2
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.+.|.
T Consensus 239 g~d~v~d~~G~ 249 (345)
T 3jv7_A 239 GATAVFDFVGA 249 (345)
T ss_dssp CEEEEEESSCC
T ss_pred CCeEEEECCCC
Confidence 68999999884
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.011 Score=47.07 Aligned_cols=47 Identities=21% Similarity=0.261 Sum_probs=39.6
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
..+++||+++|.|++.-+|+-+++.|++.|++|.++.+....+.+..
T Consensus 154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~~ 200 (288)
T 1b0a_A 154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHV 200 (288)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHH
T ss_pred CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHHh
Confidence 35789999999999999999999999999999999987665544433
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0091 Score=49.15 Aligned_cols=80 Identities=18% Similarity=0.164 Sum_probs=52.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh-------------------hhHHHHHHHhhh--CCCeEEEE
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE-------------------VELNKCLKEWQS--KGFVVSGS 71 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~--~~~~v~~~ 71 (218)
.+++++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+...+.+.. ....+..+
T Consensus 115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI 193 (353)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence 456789999998 7899999999999997 788888652 233334444432 24456666
Q ss_pred EeeCCCHHHHHHHHHHHHhhcCCcccEEEecC
Q 027816 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNV 103 (218)
Q Consensus 72 ~~D~~~~~~~~~~~~~~~~~~~~~id~vv~~a 103 (218)
..++++..++. + + ...|+||.+.
T Consensus 194 ~~~i~~~~~~~-------~-~-~~~DlVvd~~ 216 (353)
T 3h5n_A 194 ALNINDYTDLH-------K-V-PEADIWVVSA 216 (353)
T ss_dssp ECCCCSGGGGG-------G-S-CCCSEEEECC
T ss_pred ecccCchhhhh-------H-h-ccCCEEEEec
Confidence 66665544221 1 2 3567777764
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=96.10 E-value=0.076 Score=42.81 Aligned_cols=39 Identities=15% Similarity=-0.080 Sum_probs=34.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKC 57 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~ 57 (218)
++|.|.|+ |.+|..++..|++.|. +|++.+++++.++..
T Consensus 5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~ 44 (317)
T 2ewd_A 5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK 44 (317)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence 57889998 9999999999999998 999999998776653
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.039 Score=44.35 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=33.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELN 55 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~ 55 (218)
++|.|.|+ |.+|..++..|++.|. +|.+++|+++..+
T Consensus 8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~ 46 (319)
T 1lld_A 8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVE 46 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHH
Confidence 57899998 9999999999999998 9999999987665
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.084 Score=44.15 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=38.3
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
+.+.+|+|.|+ |.+|...++.+...|++|++.+++...++...+
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 46789999999 799999999999999999999999987665543
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.04 E-value=0.013 Score=46.60 Aligned_cols=41 Identities=7% Similarity=0.060 Sum_probs=36.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
++|.|.|++|.+|..+++.|.+.|++|++.+|+++..+...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~ 52 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ 52 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 57999999999999999999999999999999988766554
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.03 E-value=0.11 Score=42.04 Aligned_cols=43 Identities=9% Similarity=-0.073 Sum_probs=36.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 61 (218)
++|.|+|| |.+|..++..|+..|. +|++.++++++++....++
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l 48 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDT 48 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHH
Confidence 47889998 9999999999999997 8999999988776544444
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.027 Score=45.00 Aligned_cols=69 Identities=12% Similarity=0.052 Sum_probs=46.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++|.|.||.|.||.++++.|.+.|++|.+.+|+++.- ..+.+. ..++..+.+- ...+.++++++....
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~~--~aDvVilavp---~~~~~~vl~~l~~~l 89 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESILA--NADVVIVSVP---INLTLETIERLKPYL 89 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHHT--TCSEEEECSC---GGGHHHHHHHHGGGC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHhc--CCCEEEEeCC---HHHHHHHHHHHHhhc
Confidence 35789999999999999999999999999999886531 111121 2234444332 233666777765544
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.009 Score=45.47 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=34.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
..+++.|.| .|.+|..+++.|.+.|++|.+.+|+.+..+..
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~ 67 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL 67 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 346788998 79999999999999999999999998765543
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.02 Score=45.83 Aligned_cols=39 Identities=26% Similarity=0.260 Sum_probs=34.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++..+..
T Consensus 16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 57888988 8999999999999999999999998876654
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.012 Score=47.19 Aligned_cols=44 Identities=25% Similarity=0.354 Sum_probs=37.8
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~ 55 (218)
..+++||+++|.|++.-+|+.+++.|++.|++|.++.+....+.
T Consensus 160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~ 203 (301)
T 1a4i_A 160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD 203 (301)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH
Confidence 35788999999999999999999999999999999976654443
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.019 Score=48.84 Aligned_cols=78 Identities=22% Similarity=0.296 Sum_probs=51.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++++|+++|.|. |+.|.++|+.|.++|++|.+.+++........+.+...+..+. ...- .++ .+.
T Consensus 6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~--~g~~--~~~----------~~~ 70 (451)
T 3lk7_A 6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV--CGSH--PLE----------LLD 70 (451)
T ss_dssp TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE--ESCC--CGG----------GGG
T ss_pred hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE--ECCC--hHH----------hhc
Confidence 567899999999 7899999999999999999999865322223334444444333 1111 111 111
Q ss_pred CcccEEEecCCCC
Q 027816 94 GKLNILVNNVGTN 106 (218)
Q Consensus 94 ~~id~vv~~ag~~ 106 (218)
+..|.||.+.|+.
T Consensus 71 ~~~d~vv~spgi~ 83 (451)
T 3lk7_A 71 EDFCYMIKNPGIP 83 (451)
T ss_dssp SCEEEEEECTTSC
T ss_pred CCCCEEEECCcCC
Confidence 2379999998874
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=95.87 E-value=0.017 Score=45.79 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=39.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 61 (218)
.+|+++|.|+ ||.|++++..|.+.|+ +|.+++|+.++.+.+.+.+
T Consensus 118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~ 163 (271)
T 1npy_A 118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 163 (271)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 4678999985 7999999999999997 7999999998888777665
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.048 Score=44.26 Aligned_cols=78 Identities=13% Similarity=0.207 Sum_probs=49.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|++|+|.|+ |++|...+..+...|+. ++.+++++++++. .+++. .... .|..+.+ ..+....+.+. .
T Consensus 160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~~lG---a~~~---i~~~~~~-~~~~~~~~~~~--~ 228 (346)
T 4a2c_A 160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AKSFG---AMQT---FNSSEMS-APQMQSVLREL--R 228 (346)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHTT---CSEE---EETTTSC-HHHHHHHHGGG--C
T ss_pred CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HHHcC---CeEE---EeCCCCC-HHHHHHhhccc--C
Confidence 5789999987 89999998888889985 5677888876543 33332 1221 3333322 22333443332 3
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
..|+++.+.|
T Consensus 229 g~d~v~d~~G 238 (346)
T 4a2c_A 229 FNQLILETAG 238 (346)
T ss_dssp SSEEEEECSC
T ss_pred Cccccccccc
Confidence 5788998877
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.016 Score=47.28 Aligned_cols=41 Identities=32% Similarity=0.417 Sum_probs=35.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.|.+|+|+|+ |++|...+..+...|++|+++++++++.+..
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 216 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA 216 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 5789999997 9999999888888999999999998887644
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.032 Score=44.21 Aligned_cols=83 Identities=17% Similarity=0.087 Sum_probs=52.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHH-h------hh--CCCeEEEEEeeCCCHHHHHHHH---
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE-W------QS--KGFVVSGSVCDAASPDQREKLI--- 85 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-~------~~--~~~~v~~~~~D~~~~~~~~~~~--- 85 (218)
++|.|.|+ |.+|..+++.|++.|++|.+.+|++++.+...+. + .+ ...++. ..=+.+...+++++
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvv--i~~vp~~~~~~~v~~~~ 78 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVT--FAMLADPAAAEEVCFGK 78 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEE--EECCSSHHHHHHHHHST
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEE--EEEcCCHHHHHHHHcCc
Confidence 56788875 8999999999999999999999998876654331 0 00 011222 22244456677766
Q ss_pred HHHHhhcCCcccEEEecCC
Q 027816 86 QEVGSKFNGKLNILVNNVG 104 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag 104 (218)
+++.+.. .+-.++++..+
T Consensus 79 ~~l~~~l-~~~~~vi~~st 96 (287)
T 3pef_A 79 HGVLEGI-GEGRGYVDMST 96 (287)
T ss_dssp TCHHHHC-CTTCEEEECSC
T ss_pred chHhhcC-CCCCEEEeCCC
Confidence 5555543 22245555533
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.058 Score=40.74 Aligned_cols=77 Identities=14% Similarity=0.119 Sum_probs=49.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+..+..+++.|.| .|.+|..+++.|++.|.+|.+.+|+++ .....++..+.+- ...++++++++...
T Consensus 14 ~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~---~~~~~~v~~~l~~~ 80 (209)
T 2raf_A 14 NLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP---YPALAALAKQYATQ 80 (209)
T ss_dssp ------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC---HHHHHHHHHHTHHH
T ss_pred ccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC---cHHHHHHHHHHHHh
Confidence 3456678899999 799999999999999999999999876 1122334433332 66677777777655
Q ss_pred cCCcccEEEecC
Q 027816 92 FNGKLNILVNNV 103 (218)
Q Consensus 92 ~~~~id~vv~~a 103 (218)
.. -.+++...
T Consensus 81 ~~--~~~vi~~~ 90 (209)
T 2raf_A 81 LK--GKIVVDIT 90 (209)
T ss_dssp HT--TSEEEECC
T ss_pred cC--CCEEEEEC
Confidence 42 13455443
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=95.78 E-value=0.035 Score=48.65 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=30.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 456789999986 6899999999999997 78888643
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=95.76 E-value=0.054 Score=44.01 Aligned_cols=77 Identities=17% Similarity=0.228 Sum_probs=47.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+++|.|| |++|...+..+... |++|+.+++++++++... ++ +.... .|-.+.+..+++.+ ..++
T Consensus 163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~---Ga~~~---i~~~~~~~~~~v~~----~t~g 230 (348)
T 4eez_A 163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KI---GADVT---INSGDVNPVDEIKK----ITGG 230 (348)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HT---TCSEE---EEC-CCCHHHHHHH----HTTS
T ss_pred CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hc---CCeEE---EeCCCCCHHHHhhh----hcCC
Confidence 4789999987 77887777777665 679999999988764332 22 22222 34444333333322 2222
Q ss_pred -cccEEEecCC
Q 027816 95 -KLNILVNNVG 104 (218)
Q Consensus 95 -~id~vv~~ag 104 (218)
.+|.++.+++
T Consensus 231 ~g~d~~~~~~~ 241 (348)
T 4eez_A 231 LGVQSAIVCAV 241 (348)
T ss_dssp SCEEEEEECCS
T ss_pred CCceEEEEecc
Confidence 4788887766
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 218 | ||||
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 3e-62 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 7e-61 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 5e-54 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 7e-54 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 6e-53 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 1e-52 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 1e-50 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 3e-50 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 2e-48 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 5e-48 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 4e-47 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 2e-46 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 4e-46 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 1e-45 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 2e-45 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-45 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 7e-45 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 7e-45 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 8e-44 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 9e-44 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 3e-43 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 8e-43 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 2e-42 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 3e-42 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 7e-42 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 2e-41 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 4e-41 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 5e-41 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 1e-40 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 1e-40 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 1e-40 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 7e-40 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 8e-40 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 1e-39 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 8e-39 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 3e-38 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 1e-37 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 1e-37 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 1e-37 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 8e-37 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 8e-37 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 9e-37 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 2e-36 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 4e-36 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 5e-36 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 8e-36 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-35 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 7e-35 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 2e-33 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 9e-33 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 1e-32 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 1e-32 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 8e-31 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 2e-30 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 2e-29 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 1e-28 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 9e-27 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 3e-25 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 3e-25 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 2e-21 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 2e-18 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-17 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 5e-17 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 2e-16 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 5e-13 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 8e-12 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 7e-08 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 1e-06 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 1e-06 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 3e-05 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 3e-05 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 1e-04 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-04 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-04 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 2e-04 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-04 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-04 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 6e-04 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 9e-04 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 0.003 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 0.003 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 0.004 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 0.004 |
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 192 bits (489), Expect = 3e-62
Identities = 123/201 (61%), Positives = 150/201 (74%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
S RWSLK T LVTGGT+GIG A VEE AG GAV+HTC+RNE ELN+CL +WQ KGF V+
Sbjct: 1 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVT 60
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
GSVCDA+ +REKL+Q V S F GKL+IL+NN+G KPT++Y+AE++S ++TN ES
Sbjct: 61 GSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLES 120
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL QL +PLLKASG G+I+F+SS+ G+ GSIY ATK A+NQL RNLACEWA D
Sbjct: 121 AYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDG 180
Query: 190 IRTNSVAPWYTKTSLVERVMF 210
IR N+VAP T L E V
Sbjct: 181 IRANAVAPAVIATPLAEAVYD 201
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 189 bits (480), Expect = 7e-61
Identities = 117/200 (58%), Positives = 144/200 (72%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVS 69
+ RW+L+G TALVTGG+RGIG VEELA LGA V+TCSRN+ ELN CL +W+SKGF V
Sbjct: 1 AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 60
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
SVCD +S +R++L+ V + F+GKLNILVNN G I K +Y+ E+YS IM+ NFE+
Sbjct: 61 ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEA 120
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
YHL L +P LKAS G++VFISSV G V ++YGATK AM+QLTR LA EWAKDN
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 180
Query: 190 IRTNSVAPWYTKTSLVERVM 209
IR N V P TSLVE +
Sbjct: 181 IRVNGVGPGVIATSLVEMTI 200
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 171 bits (435), Expect = 5e-54
Identities = 118/199 (59%), Positives = 150/199 (75%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
RWSLKG TALVTGG++GIG A VEELAGLGA V+TCSRNE EL++CL+ W+ KG V GS
Sbjct: 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
VCD S +R+KL+Q V F+GKLNILVNN G I K +++ ++Y+ IM TNFE+ Y
Sbjct: 61 VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
HL Q+ YPLLKAS G+++F+SS+ G S + S S+Y A+K A+NQ+T++LACEWAKDNIR
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180
Query: 192 TNSVAPWYTKTSLVERVMF 210
NSVAP T LVE +
Sbjct: 181 VNSVAPGVILTPLVETAIK 199
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 171 bits (434), Expect = 7e-54
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTGG RGIG+A + A GA+V C E + + F D
Sbjct: 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VD 56
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+R + ++E G++++LVNN + E+ +++ N + HL
Sbjct: 57 LEDERERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLS 115
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
L ++ G G+IV ++SV GL + Y A+K + LTR+LA + A IR N+
Sbjct: 116 ALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 175
Query: 195 VAPWYTKTSLVERVMFSN 212
VAP T V + +
Sbjct: 176 VAPGAIATEAVLEAIALS 193
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 168 bits (426), Expect = 6e-53
Identities = 46/203 (22%), Positives = 81/203 (39%), Gaps = 4/203 (1%)
Query: 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71
R S+ G L+TG GIG+ T E A L + + N+ L + + + G V
Sbjct: 2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
V D ++ + ++V ++ G ++ILVNN G + K N + +
Sbjct: 62 VVDCSNREDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHF 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK---D 188
+ P + + G IV ++S G V Y ++K A + L E A
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180
Query: 189 NIRTNSVAPWYTKTSLVERVMFS 211
++T + P + T ++ S
Sbjct: 181 GVKTTCLCPNFVNTGFIKNPSTS 203
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 167 bits (425), Expect = 1e-52
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK A++TGG GIG+A E A GA + + ++ G V CD
Sbjct: 3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAE--AAIRNLGRRVLTVKCD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P E ++V S F G+ +ILVNN G P E + E++ K N +S + +
Sbjct: 61 VSQPGDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMA 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P +K +G G I+ ++S + + + Y +TKAA TR LA + KD I N+
Sbjct: 120 KAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA 179
Query: 195 VAPWYTKTSLVERVMFS 211
+AP +T+ E S
Sbjct: 180 IAPSLVRTATTEASALS 196
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (413), Expect = 1e-50
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 9/203 (4%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF--VVSGSV 72
+ ALVTG + GIG A L G V C+R + + E +S G+ +
Sbjct: 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD ++ + + + S+ ++I +NN G + S + + N +
Sbjct: 68 CDLSNEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSI 126
Query: 133 LCQLVYPLLKASGV--GSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRNLACEW--A 186
+ Y +K V G I+ I+S+ G + Y ATK A+ LT L E A
Sbjct: 127 CTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA 186
Query: 187 KDNIRTNSVAPWYTKTSLVERVM 209
+ +IR ++P +T ++
Sbjct: 187 QTHIRATCISPGVVETQFAFKLH 209
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 162 bits (410), Expect = 3e-50
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 8/204 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
A++TG + GIG+AT A GA V R+ L + ++ + G V+
Sbjct: 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNF 127
V D + +++++ KF GKL+ILVNN G I K S E Y + N
Sbjct: 63 VADVTTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S L + P L ++ + S GL Y KAA++Q TRN A + +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181
Query: 188 DNIRTNSVAPWYTKTSLVERVMFS 211
IR NS++P T +
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMP 205
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 157 bits (398), Expect = 2e-48
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 4/196 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G T ++TGG RG+G + GA V + E +E D
Sbjct: 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQ---HLD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ ++++ +F G ++ LVNN G + S E + K++ N +
Sbjct: 60 VTIEEDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V P +K +G GSIV ISS GL + S YGA+K + L++ A E D IR NS
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178
Query: 195 VAPWYTKTSLVERVMF 210
V P T T +
Sbjct: 179 VHPGMTYTPMTAETGI 194
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (394), Expect = 5e-48
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G +VTGG RGIG V GA V C ++E +E F++ CD
Sbjct: 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFIL----CD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE-YSAEEYSKIMTTNFESTYHL 133
D + L+ E +F +L+ +VNN G + E SA+ + +++ N TY L
Sbjct: 60 VTQEDDVKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+L P L+ S G+++ ISS+ G Y ATK A+ +T+ LA + + +R N
Sbjct: 119 TKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 177
Query: 194 SVAPWYTKTSLVERV 208
++P T L E +
Sbjct: 178 CISPGNIWTPLWEEL 192
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 153 bits (388), Expect = 4e-47
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 7/197 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+G ALVTGG G+G V+ L G GA V NE + E + V D
Sbjct: 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+S ++ V + G LN+LVNN G + E++S+++ N ES + C
Sbjct: 61 VSSEADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD--NIRT 192
Q +K +G GSI+ ++SV + + Y A+KAA++ LTR A K IR
Sbjct: 120 QQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178
Query: 193 NSVAPWYTKTSLVERVM 209
NS+ P T +++ +
Sbjct: 179 NSIHPDGIYTPMMQASL 195
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 152 bits (386), Expect = 2e-46
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 8/202 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
T ++TG + GIG+ T A GA V R+ L + + G V+
Sbjct: 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNF 127
V D + D ++++I +F GK+++LVNN G I + + Y K + N
Sbjct: 63 VADVTTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
++ + + V P L AS + S V G Y KAA++Q TR+ A + AK
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181
Query: 188 DNIRTNSVAPWYTKTSLVERVM 209
IR NSV+P +T +
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMG 203
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 150 bits (381), Expect = 4e-46
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
+ G+ ALVTG +GIG+ TV+ L GA V +R +L KE V
Sbjct: 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPV----CV 57
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D D EK + + G +++LVNN I +P +E + E + + + N S + +
Sbjct: 58 DLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 112
Query: 134 CQLVYP-LLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q+V ++ GSIV +SS+ + Y +TK AM LT+ +A E IR
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172
Query: 193 NSVAPWYTKTSLVERVM 209
NSV P T + ++V
Sbjct: 173 NSVNPTVVLTDMGKKVS 189
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (377), Expect = 1e-45
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G LVTG +GIG+ TV+ L GA V SR + +L+ ++E V
Sbjct: 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVC----V 59
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + E+ + VG +++LVNN + +P +E + E + + N + +
Sbjct: 60 DLGDWEATERALGSVG-----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 134 CQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
Q+V L A GV +IV +SS V + S+Y +TK A++ LT+ +A E IR
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 193 NSVAPWYTKTSLVERVM 209
N+V P TS+ +
Sbjct: 175 NAVNPTVVMTSMGQATW 191
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 150 bits (381), Expect = 2e-45
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 13/197 (6%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVV---------HTCSRNEVELNKCLKEWQSKG 65
G LVTG G+G+A A GA+V + +K ++E + +G
Sbjct: 5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125
+ + EKL++ F G+++++VNN G + S E++ I
Sbjct: 65 GKAVANYDS---VEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRV 120
Query: 126 NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+ ++ + + + +K G I+ +S G+ + Y A K + L L E
Sbjct: 121 HLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEG 180
Query: 186 AKDNIRTNSVAPWYTKT 202
K+NI N++AP
Sbjct: 181 RKNNIHCNTIAPNAGSR 197
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 148 bits (375), Expect = 3e-45
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 7/194 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LK L+TG GIG+AT+E A GA + C E L + + + V D
Sbjct: 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV-----VMD 57
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
A P E+ E + G+L+ +V+ G + E++ ++ N ++ +
Sbjct: 58 VADPASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVA 116
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ ++ GSIV +S L ++G + Y A+ A + LTR LA E + IR N+
Sbjct: 117 KAASEAMREKNPGSIVLTASRVYLGNLGQ-ANYAASMAGVVGLTRTLALELGRWGIRVNT 175
Query: 195 VAPWYTKTSLVERV 208
+AP + +T + +V
Sbjct: 176 LAPGFIETRMTAKV 189
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 148 bits (374), Expect = 7e-45
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 5/198 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G A++TGGT GIG A + GA V R+ K K + + D
Sbjct: 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ D KL F G ++ LVNN G + K E + E+ K++ N + +
Sbjct: 63 SSDEDGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 135 QLVYPLLKASGVGS-IVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNIR 191
+L +K G+G+ I+ +SS+ G S Y A+K A+ ++++ A + A ++R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181
Query: 192 TNSVAPWYTKTSLVERVM 209
N+V P Y KT LV+ +
Sbjct: 182 VNTVHPGYIKTPLVDDLP 199
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 148 bits (375), Expect = 7e-45
Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 6/199 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV---VSGS 71
G + ++TG + GIG++ A GA V RNE L + ++ G ++
Sbjct: 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFES 129
V D ++ +I +KF GK++ILVNN G N+ T + E Y K NF++
Sbjct: 62 VADVTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
+ Q L + + S V G Y KAA++Q TR A + +
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180
Query: 190 IRTNSVAPWYTKTSLVERV 208
+R NSV+P T + +
Sbjct: 181 VRVNSVSPGAVATGFMGAM 199
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 145 bits (366), Expect = 8e-44
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
+ + ALVTG RGIG+ + LA + V SR + + + E +S G+ SG
Sbjct: 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + ++ ++I ++ ++ ++ILVNN G + +E+ ++ TN S ++
Sbjct: 66 GDVSKKEEISEVINKILTEH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFY 124
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ Q + + + G I+ ISS+ GL+ + Y ++KA + T++LA E A NI
Sbjct: 125 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 184
Query: 193 NSVAPWYTKTSL 204
N++AP + + +
Sbjct: 185 NAIAPGFISSDM 196
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 145 bits (367), Expect = 9e-44
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSV 72
SL+G ALVTG RGIG+ EL G V N E + + + G +
Sbjct: 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK 74
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
+ + ++ +E F GKL+I+ +N G + + EE+ ++ T N +
Sbjct: 75 ANVGVVEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 133
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ + Y L+ G ++ + G V ++Y +K A+ R +A + A I
Sbjct: 134 VAREAYKHLEIGGRLILMGSIT-GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 192
Query: 193 NSVAPWYTKTSLVERVM 209
N VAP KT + V
Sbjct: 193 NVVAPGGIKTDMYHAVC 209
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 144 bits (363), Expect = 3e-43
Identities = 67/199 (33%), Positives = 107/199 (53%), Gaps = 3/199 (1%)
Query: 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGS 71
+ L+G ALVTGG+RG+G + LA G V SRN E ++ ++ K G
Sbjct: 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
CD ++ ++ +KL++ V KF GKL+ +VN G N R P E+ +E+ +++ N TY
Sbjct: 61 RCDVSNYEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTY 119
Query: 132 HLCQLVYPLLKASGVGSIVFIS-SVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
++C+ + LL+ S SI+ I + + S Y A+K + LT+ LA EW + I
Sbjct: 120 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 179
Query: 191 RTNSVAPWYTKTSLVERVM 209
R N +AP + +T + E V
Sbjct: 180 RVNVIAPGWYRTKMTEAVF 198
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (361), Expect = 8e-43
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 5/199 (2%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L+G +VTG ++GIG+ LA +GA V +R++ L K + G + +
Sbjct: 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70
Query: 74 D-AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
E+ + + G G L++L+ N TN K M NF S
Sbjct: 71 GTMEDMTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVV 129
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD--NI 190
L P+LK S GSIV +SS+ G + Y A+K A++ ++ E++ N+
Sbjct: 130 LTVAALPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 188
Query: 191 RTNSVAPWYTKTSLVERVM 209
T + +
Sbjct: 189 SITLCVLGLIDTETAMKAV 207
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 141 bits (356), Expect = 2e-42
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 8/196 (4%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L+TG +GIG+A E A V+ SR +L K E +++G +
Sbjct: 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + +L + ++ G ++ LVNN G + + E++ M TN + T+
Sbjct: 64 ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
L Q ++ L++ G I FI+SV SIY +K L + K N+R
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182
Query: 193 NSVAPWYTKTSLVERV 208
V P T + +V
Sbjct: 183 TDVQPGAVYTPMWGKV 198
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 141 bits (357), Expect = 3e-42
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L+ A++TGG GIG+ T + GA V + K S V+S CD
Sbjct: 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPT--IEYSAEEYSKIMTTNFESTYH 132
+ L+ +K GKL+I+ NVG P +E E++ ++M N +
Sbjct: 63 VTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ + ++ + GSIVF +S+ + G +Y ATK A+ LT +L E + IR
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181
Query: 192 TNSVAPWYTKTSLVERVM 209
N V+P+ + L+ V
Sbjct: 182 VNCVSPYIVASPLLTDVF 199
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 140 bits (354), Expect = 7e-42
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 10/204 (4%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
S T +VTGG RGIG A +A GA V R+ + + ++ + G
Sbjct: 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
CD ++ D K IQ++ + G ++ L+ N G ++ KP E + E+++ + N ++
Sbjct: 66 CDVSNTDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFN 124
Query: 133 LCQLVYPLLKASGVGSIVFISS--------VGGLSHVGSGSIYGATKAAMNQLTRNLACE 184
C+ V L + ++S L+ + Y ++KAA + L + LA E
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184
Query: 185 WAKDNIRTNSVAPWYTKTSLVERV 208
WA IR N+++P Y T +
Sbjct: 185 WASAGIRVNALSPGYVNTDQTAHM 208
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 139 bits (351), Expect = 2e-41
Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 3/195 (1%)
Query: 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
ALVTG T GIG L G V C+R E L LKE + G G CD
Sbjct: 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
S + E L+ V ++ G +++LVNN G T E + E + ++ TN + + +
Sbjct: 62 SVPEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQ 120
Query: 137 VYPL--LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
V + G G IV I+S GG V + Y A+K + T+ L E A+ I N+
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180
Query: 195 VAPWYTKTSLVERVM 209
V P + +T + V
Sbjct: 181 VCPGFVETPMAASVR 195
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 138 bits (348), Expect = 4e-41
Identities = 38/201 (18%), Positives = 65/201 (32%), Gaps = 14/201 (6%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC--LKEWQSKGFVVSGS 71
L + GIG T EL LK K + +
Sbjct: 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61
Query: 72 VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY 131
+ +KL++++ + ++IL+N G + + + NF
Sbjct: 62 YDVTVPVAESKKLLKKIFDQL-KTVDILINGAGI--------LDDHQIERTIAINFTGLV 112
Query: 132 HLCQLVYPLLKAS---GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
+ + G I I SV G + + +Y A+KAA+ T +LA
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
+ S+ P T+T LV
Sbjct: 173 GVTAYSINPGITRTPLVHTFN 193
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (347), Expect = 5e-41
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ++T +GIGQA A GA V NE +L + K + V
Sbjct: 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV------- 56
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
D +K + + +L++L N G ++ +++ M N S Y +
Sbjct: 57 ---LDVTKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMI 113
Query: 135 QLVYPLLKASGVGSIVFISSV-GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
+ P + A G+I+ +SSV + V + +Y TKAA+ LT+++A ++ + IR N
Sbjct: 114 KAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173
Query: 194 SVAPWYTKTSLVERVM 209
V P T ++ +
Sbjct: 174 CVCPGTVDTPSLQERI 189
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 1e-40
Identities = 64/200 (32%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-----SKGFVVS 69
L+G A+VTGG GIG+A V+EL LG+ V SR L E Q +K V
Sbjct: 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69
Query: 70 GSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFES 129
C+ + ++ L++ F GK+N LVNN G P S++ + ++ TN
Sbjct: 70 PIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTG 128
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
T+++C+ VY GSIV I + GA +A + LT++LA EWA
Sbjct: 129 TFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLA-VHSGAARAGVYNLTKSLALEWACSG 187
Query: 190 IRTNSVAPWYTKTSLVERVM 209
IR N VAP +
Sbjct: 188 IRINCVAPGVIYSQTAVENY 207
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 137 bits (346), Expect = 1e-40
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV 67
F S L G A++TG GIG+ A GA V N N + E Q G
Sbjct: 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ 61
Query: 68 VSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNF 127
CD S + L SK GK++ILVNN G KP + ++ + N
Sbjct: 62 AFACRCDITSEQELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNV 119
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S +HL QLV P ++ +G G I+ I+S+ + + + Y ++KAA + L RN+A + +
Sbjct: 120 FSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGE 179
Query: 188 DNIRTNSVAPWYTKTSLVERVM 209
NIR N +AP T ++ V+
Sbjct: 180 KNIRVNGIAPGAILTDALKSVI 201
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 137 bits (346), Expect = 1e-40
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 3/197 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
L G AL TG RGIG+ EL GA VV + + + E + G
Sbjct: 4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + P + L + S F G L+ +++N G + +E + E + K+ N + +
Sbjct: 64 DISKPSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFV 122
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q + G I+ S ++ + + ++Y +KAA+ R A + + N
Sbjct: 123 AQQGLKHCRRGGRI-ILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN 181
Query: 194 SVAPWYTKTSLVERVMF 210
+AP KT + + +
Sbjct: 182 CIAPGGVKTDMFDENSW 198
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 7e-40
Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 16/201 (7%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVC 73
G ALVTG +GIG+A E L GA V N +C + C
Sbjct: 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D A Q ++V F G+L+ILVNN G N K + K + N S
Sbjct: 62 DVADQQQLRDTFRKVVDHF-GRLDILVNNAGVNNEKN--------WEKTLQINLVSVISG 112
Query: 134 CQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRN--LACEWAKD 188
L + G I+ +SS+ GL V +Y A+K + TR+ LA
Sbjct: 113 TYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS 172
Query: 189 NIRTNSVAPWYTKTSLVERVM 209
+R N++ P + T+++E +
Sbjct: 173 GVRLNAICPGFVNTAILESIE 193
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 135 bits (340), Expect = 8e-40
Identities = 49/195 (25%), Positives = 79/195 (40%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
G LVTG IG AT LA G + N L K + KG VCD
Sbjct: 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
S + + V F + N P +Y ++++++++T N +H+
Sbjct: 63 VTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVL 122
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V + G IV +S+ G+ + + YG +K A+ LT A + A NIR N+
Sbjct: 123 KAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNA 182
Query: 195 VAPWYTKTSLVERVM 209
++P Y +
Sbjct: 183 ISPGYMGPGFMWERQ 197
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 135 bits (341), Expect = 1e-39
Identities = 53/201 (26%), Positives = 83/201 (41%), Gaps = 11/201 (5%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
LKG L+TGG G+G+A V+ GA V ++ L + + G V G V D
Sbjct: 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETD---HGDNVLGIVGD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEY-----SAEEYSKIMTTNFES 129
S + +++ ++F GK++ L+ N G + + ++ N +
Sbjct: 60 VRSLEDQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118
Query: 130 TYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDN 189
H + P L AS G+++F S G G G +Y A K A+ L R LA E A
Sbjct: 119 YIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PY 176
Query: 190 IRTNSVAPWYTKTSLVERVMF 210
+R N V + L
Sbjct: 177 VRVNGVGSGGINSDLRGPSSL 197
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 132 bits (332), Expect = 8e-39
Identities = 60/194 (30%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G ALV+GG RG+G + V + GA V + E E V D
Sbjct: 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLD 60
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
P Q + + + F G L++LVNN G +Y+ E+ +I+ N +
Sbjct: 61 VTQPAQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V +K +G GSI+ ISS+ GL+ + Y ATK A+ LT++ A E IR NS
Sbjct: 120 RAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNS 179
Query: 195 VAPWYTKTSLVERV 208
+ P KT + + V
Sbjct: 180 IHPGLVKTPMTDWV 193
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 130 bits (328), Expect = 3e-38
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 7/195 (3%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G T LVTG GIG+A ++ A GA + R E L + + +++ V V D
Sbjct: 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VAD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
+ P E + E +F G+L+ + + G + E + K++ N ++ +
Sbjct: 60 VSDPKAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVA 118
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ +L+ GS+V SV GL G Y A K + L R LA E A+ +R N
Sbjct: 119 RKAGEVLE--EGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNV 175
Query: 195 VAPWYTKTSLVERVM 209
+ P +T + +
Sbjct: 176 LLPGLIQTPMTAGLP 190
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (327), Expect = 1e-37
Identities = 53/237 (22%), Positives = 86/237 (36%), Gaps = 49/237 (20%)
Query: 20 ALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTGG +GIG A V +L L V +R+ +++ Q++G D
Sbjct: 6 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
L + ++ G L++LVNN G + + M TNF T +C +
Sbjct: 66 QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124
Query: 139 PLLKASGVGSIVFISSVGGLSHVGS----------------------------------- 163
PL+K G +V +SS+ + + S
Sbjct: 125 PLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182
Query: 164 ------GSIYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSLVERVMF 210
S YG TK + L+R A + ++ D I N+ P + +T +
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 129 bits (325), Expect = 1e-37
Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 8/192 (4%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
TA+VT G + L+ G V + + ++ + F + S
Sbjct: 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 55
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
+ +LI+ V S + G++++LV+N +P +Y+ E+Y + + L V
Sbjct: 56 QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+K G I+FI+S S Y + +A L L+ E + NI ++ P
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174
Query: 198 WYTKTSLVERVM 209
Y +
Sbjct: 175 NYLHSEDSPYFY 186
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 129 bits (325), Expect = 1e-37
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 3/197 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW--QSKGFVVSGSV 72
LKG A+VTG T GIG LA GA + + + ++ G V
Sbjct: 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + L+ + G+++ILVNN G ++ E++ I+ N + +H
Sbjct: 62 ADLSKGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
P +K G G I+ I+S GL + S Y A K + T+ A E A I
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180
Query: 193 NSVAPWYTKTSLVERVM 209
N++ P + +T LVE+ +
Sbjct: 181 NAICPGWVRTPLVEKQI 197
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 128 bits (322), Expect = 8e-37
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 3/198 (1%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSV 72
S +G A +TGG G+G+ L+ LGA SR L ++ S+ G V
Sbjct: 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTY- 131
CD PD + + E+ G NI++NN N PT S + I T
Sbjct: 82 CDVRDPDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAF 140
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
++ L+KA + + I+++ + G + KA + ++++LA EW K +R
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 200
Query: 192 TNSVAPWYTKTSLVERVM 209
N + P KT +
Sbjct: 201 FNVIQPGPIKTKGAFSRL 218
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 127 bits (319), Expect = 8e-37
Identities = 44/208 (21%), Positives = 76/208 (36%), Gaps = 25/208 (12%)
Query: 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
+ +VTG RGIG V++L + +R+ + + S+ V+
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVL---PLTVT 61
Query: 77 SPDQREKLIQEVGSKFNGK-LNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLC 134
+ + +VG L++L+NN G + E + ++ + N S L
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 135 QLVYPLLKASGVGSIVFISSV------------------GGLSHVGSGSIYGATKAAMNQ 176
Q + PLLK + SV S Y +KAA+N
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKTSL 204
R LA + DN+ + P + +T+L
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNL 209
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 126 bits (318), Expect = 9e-37
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 4/196 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
+G ALVTG +RGIG+A E LA GA V + +E + G + +V D
Sbjct: 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 61
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
AS + + I+ G+++ILVNN G + EE++ I+ TN S + L
Sbjct: 62 PASIESVLEKIR----AEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ V + G I+ I SV G G + Y A KA + +++LA E A I N
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177
Query: 195 VAPWYTKTSLVERVMF 210
VAP + +T + +
Sbjct: 178 VAPGFIETDMTRALSD 193
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 126 bits (317), Expect = 2e-36
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF--VVSGSV 72
L+TGG G+G+AT LA GA + + L V +V
Sbjct: 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVG-TNIRKPTIEYSAEEYSKIMTTNFESTY 131
D + Q E + +F G+++ NN G + PT ++A E+ K+++ N +
Sbjct: 62 ADVSDEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120
Query: 132 HLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIR 191
+ V +++ G G +V +SVGG+ +G+ S Y A K + LTRN A E+ + IR
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180
Query: 192 TNSVAPWYTKTSLVERVM 209
N++AP T +VE M
Sbjct: 181 INAIAPGAIWTPMVENSM 198
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 125 bits (315), Expect = 4e-36
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 3/197 (1%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVC 73
L+G ++TG + G+G++ A A V R+ E E N L+E + G
Sbjct: 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D L+Q +F GKL++++NN G + E S +++K++ TN +
Sbjct: 65 DVTVESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 134 CQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRT 192
+ G+++ +SSV Y A+K M +T LA E+A IR
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183
Query: 193 NSVAPWYTKTSLVERVM 209
N++ P T +
Sbjct: 184 NNIGPGAINTPINAEKF 200
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 126 bits (316), Expect = 5e-36
Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 9/196 (4%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSR------NEVELNKCLKEWQSKGFVVSGSVC 73
L+TG + GIG LA + + L + + +
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
D + V ++LV N G + P + + ++ N T +
Sbjct: 65 DVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q P +K G G ++ SVGGL + +Y A+K A+ L +LA + +
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 194 SVAPWYTKTSLVERVM 209
+ T+ +E+V+
Sbjct: 182 LIECGPVHTAFMEKVL 197
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 124 bits (312), Expect = 8e-36
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 2/191 (1%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+VTG +RGIG+A L G V+ +R+ + K+ ++ G D +
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
E +++ + G ++++VNN G I ++ +++ N + Q
Sbjct: 64 ADVEAMMKTAIDAW-GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 139 PLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPW 198
++ G I+ I+SV GL + Y A KA + ++ A E A NI N V P
Sbjct: 123 KIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG 182
Query: 199 YTKTSLVERVM 209
+ + + ++
Sbjct: 183 FIASDMTAKLG 193
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 124 bits (311), Expect = 1e-35
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
++ LV +RGIG+A + L+ GA V C+RNE L + + VCD
Sbjct: 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCD 52
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
K + + K +++ILV N G E + E++ + + + F + +
Sbjct: 53 L------RKDLDLLFEKV-KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 105
Query: 135 QLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNS 194
+ P +K G G IV I+S +S + + + + A+ + L+ E A I N
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNC 165
Query: 195 VAPWYTKTSLVERVM 209
VAP +T+T V+ ++
Sbjct: 166 VAPGWTETERVKELL 180
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 121 bits (305), Expect = 7e-35
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 12/198 (6%)
Query: 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSG 70
++ + LVTGG RGIG A + LA G V R G
Sbjct: 1 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----------G 49
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
D D ++ V + +LV+N G + + + E++ K++ N
Sbjct: 50 VEVDVTDSDAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGA 108
Query: 131 YHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ + Q ++ + G ++FI SV GL +G+ + Y A+KA + + R++A E +K N+
Sbjct: 109 FRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANV 168
Query: 191 RTNSVAPWYTKTSLVERV 208
N VAP Y T + +
Sbjct: 169 TANVVAPGYIDTDMTRAL 186
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 118 bits (296), Expect = 2e-33
Identities = 41/209 (19%), Positives = 77/209 (36%), Gaps = 15/209 (7%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQSKG----- 65
L ++TG +RG G+A +LA L G+V+ +R+E L + +E ++
Sbjct: 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNV---GTNIRKPTIEYSAEEYSKI 122
+ + + A + ++E+ + +L+NN G + E +
Sbjct: 63 VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122
Query: 123 MTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG--SIYGATKAAMNQLTRN 180
N S L + S S ++ + +Y A KAA + L +
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQV 182
Query: 181 LACEWAKDNIRTNSVAPWYTKTSLVERVM 209
LA E ++R S AP + +
Sbjct: 183 LAAEE--PSVRVLSYAPGPLDNDMQQLAR 209
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 116 bits (291), Expect = 9e-33
Identities = 39/199 (19%), Positives = 68/199 (34%), Gaps = 20/199 (10%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
+ALVTGG G+G+A L G V +G + D
Sbjct: 3 SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 50
Query: 79 DQREKLIQEVGSKFNGK--LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ + + + ++ + I + E + +++ N T+++ +L
Sbjct: 51 EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110
Query: 137 VYPL------LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
G IV +SV + Y A+K + LT A E A I
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170
Query: 191 RTNSVAPWYTKTSLVERVM 209
R +VAP T L++ +
Sbjct: 171 RVVTVAPGLFDTPLLQGLP 189
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 116 bits (291), Expect = 1e-32
Identities = 45/192 (23%), Positives = 68/192 (35%), Gaps = 2/192 (1%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASP 78
ALVTG +GIG+A L G V N+ E G D +
Sbjct: 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62
Query: 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVY 138
DQ +++ G +++VNN G P + E K+ N + Q
Sbjct: 63 DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121
Query: 139 PL-LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
K G I+ S G ++Y ++K A+ LT+ A + A I N P
Sbjct: 122 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 181
Query: 198 WYTKTSLVERVM 209
KT + +
Sbjct: 182 GIVKTPMWAEID 193
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 116 bits (291), Expect = 1e-32
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 5/195 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCD 74
L G TAL+TG RGIG+A E GA V N E + D
Sbjct: 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI---ALD 59
Query: 75 AASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLC 134
++ + E+ ++ G ++ILVNN P +E + E Y ++ N T +
Sbjct: 60 VTDQASIDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118
Query: 135 QLVYPL-LKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTN 193
Q V + G I+ ++S G +Y ATKAA+ LT++ + I N
Sbjct: 119 QAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 178
Query: 194 SVAPWYTKTSLVERV 208
++AP + V
Sbjct: 179 AIAPGVVDGEHWDGV 193
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 111 bits (279), Expect = 8e-31
Identities = 42/192 (21%), Positives = 73/192 (38%), Gaps = 10/192 (5%)
Query: 15 LKGMTALVTGGT--RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G ALV G T R +G A +L GA V + E L ++
Sbjct: 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEALGGALLFR 64
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP----TIEYSAEEYSKIMTTNFE 128
D ++ + L V + G L+ LV+ + R+ I+ +++ + +
Sbjct: 65 ADVTQDEELDALFAGV-KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKD 188
S + + PLL+ G IV ++ V ++ KAA+ R LA E
Sbjct: 124 SLVAVARRAEPLLREGGG--IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPK 181
Query: 189 NIRTNSVAPWYT 200
+R N+++
Sbjct: 182 GVRVNAISAGPV 193
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 110 bits (276), Expect = 2e-30
Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 8/203 (3%)
Query: 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC 73
S+KG+ A++TGG G+G AT E L G GA K+ + V
Sbjct: 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTN--IRKPTIEYSAEEYSKIMTTNFESTY 131
L + + + +N V + K ++ E++ +++ N T+
Sbjct: 62 SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121
Query: 132 HLCQLVYPLLKAS------GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
++ +LV + + G I+ +SV + Y A+K + +T +A +
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 181
Query: 186 AKDNIRTNSVAPWYTKTSLVERV 208
A IR ++AP T L+ +
Sbjct: 182 APIGIRVMTIAPGLFGTPLLTSL 204
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 107 bits (268), Expect = 2e-29
Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 16/198 (8%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ LV GG +G V+ V + E E +
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTD 50
Query: 76 ASPDQREKLIQEVGSKF-NGKLNILVNNVGTN-IRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ +Q +++ EVG + K++ ++ G + + + + ++
Sbjct: 51 SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 110
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWA--KDNIR 191
L G + + L YG K A++QL ++LA + +
Sbjct: 111 SHLATK--HLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAA 168
Query: 192 TNSVAPWYTKTSLVERVM 209
+V P T + + M
Sbjct: 169 AIAVLPVTLDTPMNRKSM 186
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 106 bits (264), Expect = 1e-28
Identities = 44/206 (21%), Positives = 69/206 (33%), Gaps = 23/206 (11%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVC----- 73
A++TGG R IG + L G V R+ + L + S +C
Sbjct: 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62
Query: 74 -DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT------- 125
++ D E +I F G+ ++LVNN P + +
Sbjct: 63 LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121
Query: 126 ----NFESTYHLCQLVYPLLKASGV-----GSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176
N + L + G S+V + + +Y K A+
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181
Query: 177 LTRNLACEWAKDNIRTNSVAPWYTKT 202
LTR A E A +IR N+VAP +
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLL 207
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 100 bits (250), Expect = 9e-27
Identities = 29/194 (14%), Positives = 65/194 (33%), Gaps = 16/194 (8%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
+V GG +G A +E G V + + + +
Sbjct: 5 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTE 54
Query: 80 QREKLIQEVGSKF-NGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
Q + ++++ S +++ + G + + + ++ + S+ +L
Sbjct: 55 QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLA 114
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK--DNIRTNSV 195
G + + + S YG KAA++ LT +LA + + DN ++
Sbjct: 115 TT--HLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172
Query: 196 APWYTKTSLVERVM 209
P T + + M
Sbjct: 173 MPVTLDTPMNRKWM 186
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 97.3 bits (241), Expect = 3e-25
Identities = 33/195 (16%), Positives = 76/195 (38%), Gaps = 11/195 (5%)
Query: 15 LKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G LVTG I + + GA + +N+ +L ++E+ ++
Sbjct: 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQ 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKP-----TIEYSAEEYSKIMTTNF 127
CD A + + E+G + K + V+++G + E + +
Sbjct: 62 CDVAEDASIDTMFAELGKVWP-KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120
Query: 128 ESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
S + + +L +++ +S +G + + ++ G KA++ R +A
Sbjct: 121 YSFVAMAKACRSMLNPGS--ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGP 178
Query: 188 DNIRTNSVAPWYTKT 202
+ +R N+++ +T
Sbjct: 179 EGVRVNAISAGPIRT 193
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 97.1 bits (240), Expect = 3e-25
Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 20/210 (9%)
Query: 19 TALVTGGTRGIGQATVEELAGL---GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ L+TG RG+G V+ L L + T RN + + L++ + D
Sbjct: 4 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 62
Query: 76 ASPDQREKLIQEVG--SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ D +KL+ ++ +K G + N ++E + TN L
Sbjct: 63 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122
Query: 134 CQLVYPLLKASGVGSIVF--------------ISSVGGLSHVGSGSIYGATKAAMNQLTR 179
+ PLLK + + I + G Y +K+A+N T+
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182
Query: 180 NLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
+L+ + I S+ P + KT +
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGSSA 212
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 87.3 bits (215), Expect = 2e-21
Identities = 38/211 (18%), Positives = 73/211 (34%), Gaps = 38/211 (18%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD 79
+++G GIG AT + L G + + E+ + D ++ +
Sbjct: 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46
Query: 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIE--------------------YSAEEY 119
R++ I +V +K + ++ LV G + +
Sbjct: 47 GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQ 106
Query: 120 SKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISS-VGGLSHVGSGSIYGATKAAMNQLT 178
+ + ++ HL PL A G + V G Y +K A+
Sbjct: 107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166
Query: 179 RNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209
R A W + +R N++AP T+T L++ +
Sbjct: 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAGL 197
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 79.0 bits (193), Expect = 2e-18
Identities = 37/192 (19%), Positives = 69/192 (35%), Gaps = 6/192 (3%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
LKG L+ G + I + GA + NE L K ++ +
Sbjct: 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYE 61
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
D + + + L V G L+ +V++V ++ E T E + +
Sbjct: 62 LDVSKEEHFKSLYNSVKKDL-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120
Query: 133 LCQLVYPLLKASGVGSIVFISSV--GGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNI 190
+ LK ++ G ++ ++ G KAA+ R LA + K +I
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180
Query: 191 RTNSVAPWYTKT 202
R N+++ +T
Sbjct: 181 RVNALSAGPIRT 192
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 75.9 bits (185), Expect = 4e-17
Identities = 41/222 (18%), Positives = 72/222 (32%), Gaps = 40/222 (18%)
Query: 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG------------- 65
ALVTG + +G++ E L G V R+ E N ++
Sbjct: 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64
Query: 66 -----FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS 120
+ + +L+ + + G+ ++LVNN + P + + +
Sbjct: 65 VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHE 123
Query: 121 K--------------IMTTNFESTYHLCQLVY------PLLKASGVGSIVFISSVGGLSH 160
+ +N + Y L + P SI+ +
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183
Query: 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202
+ +IY K A+ LTR+ A E A IR N V P +
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 225
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 73.8 bits (180), Expect = 5e-17
Identities = 30/183 (16%), Positives = 60/183 (32%), Gaps = 15/183 (8%)
Query: 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
K++ S+KG A+V GT +G + LAG GA V C R + + V
Sbjct: 15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK-V 73
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
+ + + A R + ++ + + + + +
Sbjct: 74 NVTAAETADDASRAEAVKGA--------HFVFTAGAIGLE----LLPQAAWQNESSIEIV 121
Query: 129 STYHLCQ-LVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAK 187
+ Y+ L + A+ G G +G G +A + +L + +
Sbjct: 122 ADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIG-GLKLKLHRACIAKLFESSEGVFDA 180
Query: 188 DNI 190
+ I
Sbjct: 181 EEI 183
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 72.8 bits (177), Expect = 2e-16
Identities = 20/180 (11%), Positives = 52/180 (28%), Gaps = 1/180 (0%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M + GGT +G+ LA LG + SR E + E++ S +
Sbjct: 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
+ + + ++ + K + + S ++V
Sbjct: 61 AAEACDIAVLTIPWEHA-IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119
Query: 138 YPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAP 197
+L++ V S + +++ + + ++ + + +
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 64.3 bits (155), Expect = 5e-13
Identities = 38/197 (19%), Positives = 63/197 (31%), Gaps = 15/197 (7%)
Query: 10 SSRWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV---ELNKCLKEWQSKG 65
W G T LVTGGT G+G LA GA + SR+ + + E ++ G
Sbjct: 3 DDEWKPTG-TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG 61
Query: 66 FVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTT 125
+ + CD + +L+ +G + T + E +
Sbjct: 62 ARTTVAACDVTDRESVRELLGGIGDDVPLSAVF--HAAATLDDGTVDTLTGERIERASRA 119
Query: 126 NFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEW 185
+L +L L + + V SS Y A ++ LA +
Sbjct: 120 KVLGARNLHELTREL----DLTAFVLFSSFASAFGAPGLGGYAPGNAYLD----GLAQQR 171
Query: 186 AKDNIRTNSVAPWYTKT 202
D + +VA
Sbjct: 172 RSDGLPATAVAWGTWAG 188
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 60.5 bits (145), Expect = 8e-12
Identities = 24/199 (12%), Positives = 50/199 (25%), Gaps = 4/199 (2%)
Query: 15 LKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV 72
L G LV+G I GA + + + L + + + +
Sbjct: 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63
Query: 73 CDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYH 132
KL+ +V+++G + + +
Sbjct: 64 VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123
Query: 133 LCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLAC--EWAKDNI 190
+ I + + T A + N E K +
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGV 183
Query: 191 RTNSVAPWYTKTSLVERVM 209
R+N VA +T + ++
Sbjct: 184 RSNLVAAGPIRTLAMSAIV 202
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 49.4 bits (116), Expect = 7e-08
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 14 SLKGMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG 65
L+G A + G G G A + LA GA + + + K
Sbjct: 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKF 58
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 46.0 bits (108), Expect = 1e-06
Identities = 30/183 (16%), Positives = 48/183 (26%), Gaps = 33/183 (18%)
Query: 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSR--------NEVELNKCLKEWQSKGFVVSG 70
AL+TG T G E L G VH R + + K + G
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
+ D ++ + + +Q + V + S E + T
Sbjct: 63 DLSDTSNLTRILREVQ-------------PDEVYNLGAMSHVAVSFESPEYTADVDAMGT 109
Query: 131 YHLCQLVYPLLKASGVGSIVFISS--VGGLSH---------VGSGSIYGATKAAMNQLTR 179
L + + L S+ + GL S Y K +T
Sbjct: 110 LRLLEAIR-FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITV 168
Query: 180 NLA 182
N
Sbjct: 169 NYR 171
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 45.7 bits (106), Expect = 1e-06
Identities = 34/220 (15%), Positives = 67/220 (30%), Gaps = 39/220 (17%)
Query: 20 ALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNK--------------------- 56
+ G T G G +EL+ + V
Sbjct: 5 CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64
Query: 57 -----------CLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVG- 104
+ + E + + K+ GK+N+LV+++
Sbjct: 65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLAN 123
Query: 105 -TNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163
++K + S + Y ++ + S LC+ ++K + + +
Sbjct: 124 AKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGYG 183
Query: 164 GSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYTKT 202
G + KAA+ TR LA NIR N+++ K+
Sbjct: 184 G-GMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (97), Expect = 3e-05
Identities = 32/183 (17%), Positives = 46/183 (25%), Gaps = 34/183 (18%)
Query: 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSR--------NEVELNKCLKEWQSKGF-VVSG 70
AL+TG T G E L G VH R L K + + G
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63
Query: 71 SVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFEST 130
+ D K+I EV + + ++ S + + T
Sbjct: 64 DLTD---STCLVKIINEVK----------PTEIYNLGAQSHVKISFDLAEYTADVDGVGT 110
Query: 131 YHLCQLVYPLLKASGVGSIVFISS--VGGLSH---------VGSGSIYGATKAAMNQLTR 179
L V S+ + G S YGA K +
Sbjct: 111 LRLLDAVK-TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVV 169
Query: 180 NLA 182
N
Sbjct: 170 NFR 172
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 41.3 bits (95), Expect = 3e-05
Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 5/64 (7%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-----FVVSG 70
+G LVTG + VE+L G V +R+ +L K W +K V
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69
Query: 71 SVCD 74
+
Sbjct: 70 DMLK 73
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 40.2 bits (92), Expect = 1e-04
Identities = 13/71 (18%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFV--VSGSV 72
+G VTG T G L +GA V S + + + + G +
Sbjct: 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDI 65
Query: 73 CDAASPDQREK 83
D + +
Sbjct: 66 RDQNKLLESIR 76
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 39.4 bits (91), Expect = 2e-04
Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 37/192 (19%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAA 76
M L+TGG IG A V + V + N S+ + D
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC 60
Query: 77 SPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQL 136
+ ++ ++ + + +++ + ++ S + + TN TY L ++
Sbjct: 61 DSAEITRIFEQY------QPDAVMHLAA----ESHVDRSITGPAAFIETNIVGTYALLEV 110
Query: 137 -----VYPLLKASGVGSIVFISSV---GGLSHVGSG------------------SIYGAT 170
IS+ G L H S Y A+
Sbjct: 111 ARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSAS 170
Query: 171 KAAMNQLTRNLA 182
KA+ + L R
Sbjct: 171 KASSDHLVRAWR 182
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.3 bits (91), Expect = 2e-04
Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 39/178 (21%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ 80
L+TGG +G ++L G V + ++ W + + + D
Sbjct: 5 LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW------IGHENFELINHDV 58
Query: 81 REKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140
E L EV ++ L + K + TN T ++ L
Sbjct: 59 VEPLYIEVDQIYH-----LASPAS-------PPNYMYNPIKTLKTNTIGTLNMLGLA--- 103
Query: 141 LKASGVGSIVFISS----------------VGGLSHVGSGSIYGATKAAMNQLTRNLA 182
K G ++ S+ G ++ +G + Y K +
Sbjct: 104 -KRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM 159
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 39.2 bits (90), Expect = 2e-04
Identities = 10/62 (16%), Positives = 19/62 (30%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA 75
+ T V G T G + + A +G V + L + + G + +
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNN 61
Query: 76 AS 77
Sbjct: 62 VP 63
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 38.3 bits (88), Expect = 3e-04
Identities = 36/176 (20%), Positives = 53/176 (30%), Gaps = 21/176 (11%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77
M LVTGG IG V +L V + +G+ + A
Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS----------LTYAGNRANLAP 50
Query: 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLV 137
D +L G + L I E + + E+ Q +
Sbjct: 51 VDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTL 110
Query: 138 YPLLKASGVGSIVFIS--SVGGLSHVGSG---------SIYGATKAAMNQLTRNLA 182
+GVG +V +S V G GS S Y A+KA + + R
Sbjct: 111 LQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYH 166
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 38.0 bits (87), Expect = 4e-04
Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 21/181 (11%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC---LKEWQSKGF-VVSGS 71
+ +VTGG IG V + VH +++ L+ +V G
Sbjct: 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGD 60
Query: 72 VCDAASPDQREKLIQEV----------GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSK 121
+ DA D+ + S + I N +GT E K
Sbjct: 61 IADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTY-------TLLEAARK 113
Query: 122 IMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNL 181
+ PL + ++ S Y +TKAA + + +
Sbjct: 114 YDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAW 173
Query: 182 A 182
Sbjct: 174 V 174
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 37.6 bits (86), Expect = 6e-04
Identities = 15/174 (8%), Positives = 41/174 (23%), Gaps = 3/174 (1%)
Query: 9 KSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVV 68
+ W + + +TG I L G V + N+ + E
Sbjct: 7 REQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK---NEHMTEDMFCDEFH 63
Query: 69 SGSVCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFE 128
+ + + + + V + + ++ + + N
Sbjct: 64 LVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGI 123
Query: 129 STYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ + + + +G K A +L ++
Sbjct: 124 KRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYN 177
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.9 bits (84), Expect = 9e-04
Identities = 8/43 (18%), Positives = 13/43 (30%)
Query: 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57
+ + G T G T+ + G V R+ L
Sbjct: 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE 43
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 35.6 bits (80), Expect = 0.003
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQ 62
T LVTG + GQ ++L V R+ K E
Sbjct: 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD 50
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 35.6 bits (81), Expect = 0.003
Identities = 24/169 (14%), Positives = 40/169 (23%), Gaps = 31/169 (18%)
Query: 21 LVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-------VVSGSVC 73
+ G +G A +L G V R ELN F V +
Sbjct: 6 FIAGHRGMVGSAIRRQLEQRGDVE-LVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAK 64
Query: 74 DAASPDQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHL 133
+ + NI+ ++ K S+ Y K+ + L
Sbjct: 65 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELL 124
Query: 134 CQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLA 182
+ P + Y K A +L +
Sbjct: 125 QGTLEP-----------------------TNEPYAIAKIAGIKLCESYN 150
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 35.2 bits (79), Expect = 0.004
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN 55
M L+TG +G+ ++L G V ++++
Sbjct: 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDIT 39
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 35.5 bits (80), Expect = 0.004
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN----KCLKEWQSKGFVV 68
K L+ GGT IG+ V LG + R EV N + L ++ G +
Sbjct: 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL 58
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 218 | |||
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.96 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.86 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.83 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.82 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.81 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.8 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.77 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.76 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.75 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.75 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.75 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.75 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.74 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.74 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.73 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.73 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.72 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.71 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.7 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.7 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.69 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.67 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.67 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.61 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.54 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.43 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.43 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.41 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.31 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.27 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.25 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.21 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 99.18 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.13 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.06 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.06 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.03 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 98.03 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.99 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.98 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.95 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.85 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.82 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.77 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.77 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.74 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.74 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.74 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.69 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 97.65 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.63 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.61 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.58 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.56 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.56 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.5 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.49 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.48 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.48 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.42 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.4 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.37 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.37 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.34 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.22 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.21 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.2 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.19 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.19 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.18 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.18 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.16 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.15 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.13 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.12 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.11 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.11 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.1 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.08 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.07 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.05 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.03 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.0 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.99 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.95 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.93 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.84 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.83 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.8 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.8 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.75 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.74 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.67 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.63 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.62 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.61 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.59 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.57 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.56 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.5 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.36 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.33 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.28 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.28 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.22 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.22 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 96.06 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 96.0 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.93 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 95.92 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 95.91 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 95.91 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 95.89 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.86 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 95.81 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 95.77 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 95.6 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 95.46 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 95.45 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.25 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 95.22 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.21 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 95.05 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.05 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.04 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 94.89 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.88 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 94.85 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 94.79 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 94.72 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.52 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.41 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 94.25 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.23 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 94.04 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 94.03 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 93.95 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.94 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 93.86 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.8 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 93.79 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 93.77 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 93.76 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.74 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 93.74 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.59 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 93.47 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 93.47 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 93.45 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 93.39 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.37 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.36 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 93.28 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 93.28 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 93.19 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 93.01 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 92.92 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 92.89 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 92.85 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 92.84 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 92.73 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 92.67 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 92.65 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 92.61 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 92.3 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 92.21 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 92.14 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 91.9 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 91.83 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 91.82 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 91.72 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 91.72 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 91.69 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 91.67 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 91.58 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 91.39 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 91.35 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 91.34 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 91.23 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 91.0 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 90.9 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 90.88 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 90.81 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 90.8 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 90.77 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 90.72 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 90.68 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 90.63 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.62 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 90.61 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 90.55 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 90.39 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 90.08 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 89.88 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 89.87 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 89.67 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 89.64 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 89.57 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 89.55 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 89.51 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 89.42 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 89.37 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 89.35 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 88.92 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 88.61 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 88.6 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 88.47 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 88.4 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 88.01 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 87.99 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 87.97 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 87.96 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 87.91 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 87.9 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 87.87 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 87.85 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 87.84 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 87.56 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 87.33 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 87.3 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 86.65 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 86.64 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 86.56 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 86.53 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 86.24 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 86.04 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 85.55 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 85.38 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 85.11 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 84.98 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 84.95 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 84.95 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 84.59 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 84.44 | |
| d1t35a_ | 179 | Hypothetical protein YvdD {Bacillus subtilis [TaxI | 84.36 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 84.27 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 84.22 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 84.06 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 83.85 | |
| d1ydhb_ | 181 | Hypothetical protein At5g11950 {Thale cress (Arabi | 83.8 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 83.77 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 83.35 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 83.05 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 82.3 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 81.84 | |
| d2q4oa1 | 183 | Hypothetical protein At2g37210/T2N18.3 {Thale cres | 81.32 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 81.28 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 81.01 | |
| d7reqa2 | 168 | Methylmalonyl-CoA mutase alpha subunit, C-terminal | 80.94 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 80.86 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 80.83 | |
| d2fpoa1 | 183 | Methylase YhhF {Escherichia coli [TaxId: 562]} | 80.68 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 80.55 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 80.5 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 80.01 |
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=8.9e-49 Score=312.13 Aligned_cols=198 Identities=59% Similarity=0.914 Sum_probs=189.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+..+..+++|+++.++++++++++.++
T Consensus 3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++++|++|||||.....++.+.+.++|++.+++|+.+++++++.++|+|.+++.|+||++||..+..+.++..+|+++|
T Consensus 83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 162 (259)
T d2ae2a_ 83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK 162 (259)
T ss_dssp TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence 96689999999999888889999999999999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+|+++|+|+++.|++++|||||+|+||+|+|||.+...
T Consensus 163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 200 (259)
T d2ae2a_ 163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI 200 (259)
T ss_dssp HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHT
T ss_pred HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhh
Confidence 99999999999999999999999999999999987654
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-48 Score=310.58 Aligned_cols=199 Identities=32% Similarity=0.425 Sum_probs=187.9
Q ss_pred cccCCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 8 FKSSRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 8 ~~~~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
|.+.++.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++..+++|+++.+++++++++
T Consensus 2 ~~~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~ 81 (255)
T d1fmca_ 2 FNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81 (255)
T ss_dssp CCGGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHH
Confidence 34456788999999999999999999999999999999999999999999999988888899999999999999999999
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+.+++ |++|++|||||.....++ +.+.++|++.+++|+.++++++|.++|+|.+++.++||++||.++..+.++..+|
T Consensus 82 ~~~~~-g~iDilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y 159 (255)
T d1fmca_ 82 AISKL-GKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSY 159 (255)
T ss_dssp HHHHH-SSCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHH
T ss_pred HHHHc-CCCCEeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccc
Confidence 99999 799999999998776665 7899999999999999999999999999999988999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|+|+.+|+++|+.|++++|||||+|+||+|+|||.+..
T Consensus 160 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 200 (255)
T d1fmca_ 160 ASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV 200 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhcc
Confidence 99999999999999999999999999999999999998754
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.8e-49 Score=311.87 Aligned_cols=197 Identities=26% Similarity=0.387 Sum_probs=184.7
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..++++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.++..+++|+++.++++++++++.+
T Consensus 4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 83 (251)
T d2c07a1 4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT 83 (251)
T ss_dssp CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999988788899999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++ |++|++|||||.....++.+.+.++|++.+++|+.++++++|+++|+|.+++.|+||++||.++..+.++..+|+++
T Consensus 84 ~~-g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~as 162 (251)
T d2c07a1 84 EH-KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSS 162 (251)
T ss_dssp HC-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred hc-CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHH
Confidence 99 79999999999988888999999999999999999999999999999999988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+|+++|+|+|+.|++++|||||+|+||+++|+|.++.
T Consensus 163 Kaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~ 200 (251)
T d2c07a1 163 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI 200 (251)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc
Confidence 99999999999999999999999999999999998764
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=9.9e-49 Score=311.78 Aligned_cols=200 Identities=61% Similarity=0.989 Sum_probs=169.1
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+.++..+.+|+++.++++++++++.+
T Consensus 2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (259)
T d1xq1a_ 2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS 81 (259)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999888888899999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+++|++|++|||||.....++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||++||..+..+.++...|+++
T Consensus 82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~as 161 (259)
T d1xq1a_ 82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSAT 161 (259)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHH
T ss_pred HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccc
Confidence 98679999999999988889999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
|+|+.+|+++++.|++++|||||+|+||+|+|||.+....
T Consensus 162 Kaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~ 201 (259)
T d1xq1a_ 162 KGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD 201 (259)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------
T ss_pred ccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch
Confidence 9999999999999999999999999999999999987653
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.1e-48 Score=306.89 Aligned_cols=196 Identities=34% Similarity=0.551 Sum_probs=183.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++..+++|+++.++++++++++.++
T Consensus 1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999888877643 3667889999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCc-cCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGG-LSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~-~~~~~~~~~Y~~s 170 (218)
+ |++|++|||||....+++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||+++|..+ ..+.++..+|+++
T Consensus 81 ~-g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~as 159 (251)
T d1vl8a_ 81 F-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAAS 159 (251)
T ss_dssp H-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHH
T ss_pred c-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHH
Confidence 9 7999999999998888999999999999999999999999999999999998899999999765 4577888999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+|+++|+++|+.|++++|||||+|+||+++|||.+...
T Consensus 160 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~ 198 (251)
T d1vl8a_ 160 KGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF 198 (251)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH
T ss_pred HHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc
Confidence 999999999999999999999999999999999998764
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=5.9e-48 Score=304.47 Aligned_cols=193 Identities=31% Similarity=0.383 Sum_probs=182.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+ .+..+++|++|.++++++++++.+++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~- 78 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF- 78 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhC---cceEEEeecCCHHHHHHHHHHHHHHh-
Confidence 57899999999999999999999999999999999999999888887743 47788999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+++|++|||||....+++.+.+.++|++.|++|+.++++++|.++|+|.+++.|+||++||.++..+.++..+|+++|+|
T Consensus 79 g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 158 (244)
T d1nffa_ 79 GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFA 158 (244)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHH
Confidence 68999999999998899999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
+++|+|+++.|++++|||||+|+||+++|||.+....
T Consensus 159 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~ 195 (244)
T d1nffa_ 159 VRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE 195 (244)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT
T ss_pred HHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH
Confidence 9999999999999999999999999999999876543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.8e-48 Score=307.51 Aligned_cols=192 Identities=30% Similarity=0.437 Sum_probs=181.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++.. ++..+++|+++.++++++++++.+++
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~- 76 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA---NGKGLMLNVTDPASIESVLEKIRAEF- 76 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---CCcEEEEEecCHHHhhhhhhhhhccc-
Confidence 47899999999999999999999999999999999999999888877743 46778999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
|++|++|||||....+++.+.+.++|++.+++|+.++++++|+++|+|.+++.|+||++||.++..+.++..+|+++|+|
T Consensus 77 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 156 (243)
T d1q7ba_ 77 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG 156 (243)
T ss_dssp CSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred CCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence 79999999999998889999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++|+++++.|++++|||||+|+||+++|||.+...
T Consensus 157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~ 192 (243)
T d1q7ba_ 157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS 192 (243)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC
T ss_pred HHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh
Confidence 999999999999999999999999999999987654
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=8.6e-48 Score=306.25 Aligned_cols=193 Identities=32% Similarity=0.478 Sum_probs=183.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.++..+++|++|.++++++++++.+++ |+
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~ 79 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GP 79 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence 38999999999999999999999999999999999999999999998888889999999999999999999999999 79
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHH--hHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL--LKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~--l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+|++|||||.....++.+.+.++|++.+++|+.++++++|+++|+ |.+++.++||+++|..+..+.++..+|+++|+|
T Consensus 80 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaa 159 (257)
T d2rhca1 80 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHG 159 (257)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHH
Confidence 999999999988889999999999999999999999999999997 456666899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+.+|+++|+.|++++|||||+|+||+++|||.++..
T Consensus 160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 195 (257)
T d2rhca1 160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVR 195 (257)
T ss_dssp HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHH
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHH
Confidence 999999999999999999999999999999988764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=1.2e-47 Score=305.34 Aligned_cols=195 Identities=29% Similarity=0.440 Sum_probs=182.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++..+++|++|.++++++++++.++
T Consensus 1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999999988887776543 457889999999999999999999999
Q ss_pred cCCcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ |++|++|||||... .+++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|+++
T Consensus 81 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 159 (258)
T d1iy8a_ 81 F-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAA 159 (258)
T ss_dssp H-SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred h-CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHH
Confidence 9 79999999999764 567889999999999999999999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+|+.+|+++|+.|++++|||||+|+||+++|||.+...
T Consensus 160 Kaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~ 198 (258)
T d1iy8a_ 160 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM 198 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHH
Confidence 999999999999999999999999999999999988764
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=8.2e-48 Score=304.56 Aligned_cols=193 Identities=31% Similarity=0.385 Sum_probs=172.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.|+||++|||||++|||+++|++|+++|++|++++|++++. ..+.++..+.++..+++|++|.++++++++++.+++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~- 78 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF- 78 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-
Confidence 47899999999999999999999999999999999987542 223344556789999999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
|++|++|||||.....++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|+++|+|
T Consensus 79 G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 158 (247)
T d2ew8a1 79 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAA 158 (247)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhcc
Confidence 79999999999998889999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+.+|+++|+.|++++|||||+|+||+++|||.+...
T Consensus 159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~ 194 (247)
T d2ew8a1 159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASA 194 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCC---------
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccc
Confidence 999999999999999999999999999999987654
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=1.1e-47 Score=304.59 Aligned_cols=194 Identities=29% Similarity=0.367 Sum_probs=183.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++. .++..+++|+++.++++++++++.+++
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 77 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG---DAARYQHLDVTIEEDWQRVVAYAREEF- 77 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CceEEEEcccCCHHHHHHHHHHHHHHc-
Confidence 5789999999999999999999999999999999999998888777653 468889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
|++|++|||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|+++|+|
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 157 (254)
T d1hdca_ 78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG 157 (254)
T ss_dssp SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence 79999999999988889999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHhc
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMFS 211 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~~ 211 (218)
+.+|+++|+.|++++|||||+|+||+++|||.++....
T Consensus 158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~ 195 (254)
T d1hdca_ 158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR 195 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH
Confidence 99999999999999999999999999999999877543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=9.2e-48 Score=306.57 Aligned_cols=194 Identities=29% Similarity=0.422 Sum_probs=176.0
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh-hhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE-VELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++||++|||||++|||+++|++|+++|++|++++|++ +.+++..+++.. .+.++.++++|++|.++++++++++.+++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999999974 556666666543 36689999999999999999999999999
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||....+++.+.+.++|++.|++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|+++|+
T Consensus 82 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1x1ta1 82 -GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp -SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred -CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence 7999999999998888999999999999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+.+|+++++.|++++|||||+|+||+++|||.++..
T Consensus 161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 197 (260)
T d1x1ta1 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI 197 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhh
Confidence 9999999999999999999999999999999987654
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=1.3e-47 Score=305.63 Aligned_cols=194 Identities=28% Similarity=0.420 Sum_probs=184.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.+.++..+++|+++.++++++++++.+++
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF- 80 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 4789999999999999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||... .+++.+.+.++|++.+++|+.++++++++++|+|.+++.|+||++||.++..+.++..+|+++|+
T Consensus 81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa 160 (260)
T d1zema1 81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG 160 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence 79999999999764 46889999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+.+|+++|+.|++++|||||+|+||+|+|+|....
T Consensus 161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~ 196 (260)
T d1zema1 161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWER 196 (260)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHH
T ss_pred HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhc
Confidence 999999999999999999999999999999997654
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=8.8e-48 Score=303.06 Aligned_cols=192 Identities=26% Similarity=0.358 Sum_probs=183.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCe-------EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAV-------VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~-------V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++||||||++|||+++|++|+++|++ |++++|+.+++++..+++...+.++..+++|++|.++++++++++.+
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999997 89999999999999999988888999999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
++ |++|++|||||.....++.+.+.++|++.|++|+.|+++++|.++|+|++++.|+||++||.++..+.++..+|+++
T Consensus 82 ~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as 160 (240)
T d2bd0a1 82 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 160 (240)
T ss_dssp HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred Hc-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence 99 79999999999998899999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
|+|+.+|+++|+.|++++|||||+|+||+++|||+++...
T Consensus 161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~ 200 (240)
T d2bd0a1 161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD 200 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCH
Confidence 9999999999999999999999999999999999876543
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=4.2e-47 Score=302.57 Aligned_cols=195 Identities=24% Similarity=0.322 Sum_probs=182.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++||++|||||++|||+++|++|+++|++|++++|+.+ .+++..+++...+.++..+++|+++.++++++++++.+++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999999854 5677788888888899999999999999999999999999
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCC-eEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~-~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
|++|++|||||.....++.+.+.++|++.+++|+.++++++|+++|+|.+++.+ +||++||.++..+.++..+|+++|
T Consensus 84 -G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asK 162 (261)
T d1geea_ 84 -GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK 162 (261)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCC
Confidence 799999999999888899999999999999999999999999999999887654 589999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+|+.+|+++|+.|++++|||||+|+||+|+|||.+...
T Consensus 163 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~ 200 (261)
T d1geea_ 163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF 200 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH
T ss_pred ccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc
Confidence 99999999999999999999999999999999987653
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=4.1e-47 Score=301.93 Aligned_cols=191 Identities=24% Similarity=0.258 Sum_probs=181.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++..+++|++|.++++++++++.+++ |++|
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence 688999999999999999999999999999999999999999998888889999999999999999999999999 7999
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
++|||||....+++.+.+.++|++.+++|+.|+++++|+++|+|.++ +.++||++||.++..+.++...|+++|+|+.+
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 160 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 160 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence 99999999888899999999999999999999999999999987665 45789999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++|+.|++++|||||+|+||+++|||.+...
T Consensus 161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 193 (255)
T d1gega_ 161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEID 193 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHH
T ss_pred hHHHHHHHhhhhCcEEEEEecCcccChHHhhhh
Confidence 999999999999999999999999999988764
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-47 Score=302.88 Aligned_cols=196 Identities=22% Similarity=0.295 Sum_probs=185.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++..+.||++|.++++++++++.+++
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||.....++.+.+.++|++.+++|++|+++++++++|+|.+++.|+||++||.++..+.+++++|++||+
T Consensus 83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa 161 (244)
T d1yb1a_ 83 -GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKF 161 (244)
T ss_dssp -CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred -CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHH
Confidence 6899999999999888888999999999999999999999999999999999899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcc---CCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAK---DNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~---~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+.+|+++|+.|+++ .||+||+|+||+|+|+|.+...
T Consensus 162 al~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~ 201 (244)
T d1yb1a_ 162 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS 201 (244)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC
Confidence 999999999999876 4899999999999999887543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=9e-47 Score=300.26 Aligned_cols=199 Identities=59% Similarity=0.952 Sum_probs=184.1
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+..++.+.+|+++.++++++++++.++
T Consensus 1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 80 (258)
T d1ae1a_ 1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV 80 (258)
T ss_dssp CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
+++++|+++||||.....++.+.+.++|++.+++|+.+++++.+++.|+|.+++.|+||++||..+..+.++...|+++|
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK 160 (258)
T d1ae1a_ 81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK 160 (258)
T ss_dssp TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHH
Confidence 97789999999999988899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
+|+++|++.+++|++++|||||+|+||+++|||.+....
T Consensus 161 ~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~ 199 (258)
T d1ae1a_ 161 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIK 199 (258)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------
T ss_pred HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhh
Confidence 999999999999999999999999999999999876643
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=6.5e-47 Score=300.92 Aligned_cols=192 Identities=28% Similarity=0.344 Sum_probs=179.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|+++.++++++++++.+++
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~- 77 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW- 77 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh-
Confidence 478999999999999999999999999999999999999998888776 3458889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-CCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||....+++.+.+.++|++.+++|+.|+++++|+++|+|.+ ++.|+||++||.++..+.++..+|+++|+
T Consensus 78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 157 (256)
T d1k2wa_ 78 GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKA 157 (256)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhh
Confidence 79999999999988889999999999999999999999999999987654 45689999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++|+++++.|++++|||||+|+||+++|||.+...
T Consensus 158 al~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~ 194 (256)
T d1k2wa_ 158 AVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVD 194 (256)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhh
Confidence 9999999999999999999999999999999987654
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=9.9e-47 Score=298.33 Aligned_cols=189 Identities=29% Similarity=0.410 Sum_probs=175.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++. ...+++|++|.++++++++++.+++
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~-----~~~~~~Dv~~~~~v~~~~~~~~~~~- 74 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIG-----GAFFQVDLEDERERVRFVEEAAYAL- 74 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHHT-----CEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcC-----CeEEEEeCCCHHHHHHHHHHHHHhc-
Confidence 368999999999999999999999999999999999987643 333332 3467899999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
|++|++|||||...++++.+.+.++|++.+++|+.|+++++|+++|+|++++.|+||+++|.++..+.++..+|+++|+|
T Consensus 75 G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 154 (248)
T d2d1ya1 75 GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG 154 (248)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred CCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence 79999999999988899999999999999999999999999999999999988999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+.+|+++++.|++++|||||+|+||+++|||.++..
T Consensus 155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~ 190 (248)
T d2d1ya1 155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAI 190 (248)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHh
Confidence 999999999999999999999999999999987653
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=2.4e-47 Score=301.22 Aligned_cols=191 Identities=23% Similarity=0.303 Sum_probs=180.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+++|||||++|||+++|++|+++|++|++. .|+++.+++..++++..+.++..+++|++|.++++++++++.+++ |++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 80 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI 80 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence 589999999999999999999999999886 567777888888887777889999999999999999999999999 799
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHH
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQ 176 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 176 (218)
|++|||||.....++.+.+.++|++.+++|+.++++++|+++|+|.+++.|+||++||.++..+.++...|+++|+|+.+
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ 160 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 160 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence 99999999998889999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 177 LTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 177 ~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++|+.|++++|||||+|+||+++|||.++..
T Consensus 161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~ 193 (244)
T d1edoa_ 161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLG 193 (244)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC
T ss_pred ChHHHHHHHhhhCcEEEEEecceeccHHHHHhh
Confidence 999999999999999999999999999988653
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=1.4e-46 Score=298.04 Aligned_cols=194 Identities=29% Similarity=0.407 Sum_probs=181.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.. ...+..+++|++|.++++++++++.+++
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF- 80 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 47899999999999999999999999999999999999999888888754 4578899999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCC-eEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVG-SIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~-~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||....+++.+.+.++|++.|++|+.++++++++++|+|.+++.| +||++||.++..+.++...|+++|+
T Consensus 81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa 160 (251)
T d1zk4a1 81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG 160 (251)
T ss_dssp SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence 799999999999988999999999999999999999999999999999988755 8999999999999999999999999
Q ss_pred HHHHHHHHHHHH--hccCCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACE--WAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e--~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+.+|+++++.| +.++|||||+|+||+|+|||.+...
T Consensus 161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~ 199 (251)
T d1zk4a1 161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP 199 (251)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST
T ss_pred HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC
Confidence 999999999999 5688999999999999999987653
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-46 Score=298.21 Aligned_cols=190 Identities=31% Similarity=0.441 Sum_probs=176.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++. .+.++++|++|.++++++++++.+++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~----~~~~~~~Dvs~~~~v~~~~~~~~~~~- 77 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF- 77 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEccCCCHHHHHHHHHHHHHhc-
Confidence 5789999999999999999999999999999999999998887776653 47788999999999999999999999
Q ss_pred CcccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||... ..++.+.+.++|++.+++|+.++++++|+++|+|++++ |+||++||.++..+.++..+|+++|+
T Consensus 78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKa 156 (250)
T d1ydea1 78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKG 156 (250)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHh
Confidence 79999999999764 45677899999999999999999999999999998765 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+.+|+++|+.|++++|||||+|+||+|+|||.++..
T Consensus 157 al~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~ 193 (250)
T d1ydea1 157 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA 193 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH
T ss_pred hHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHh
Confidence 9999999999999999999999999999999988764
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=6.9e-47 Score=297.33 Aligned_cols=184 Identities=28% Similarity=0.440 Sum_probs=165.1
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||++|||||++|||+++|++|+++|++|++++|+++..+ .+..+++|++|.++++++++++.+++
T Consensus 3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~~~~ 71 (237)
T d1uzma1 3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEEHQ 71 (237)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----------CceEEEEecCCHHHHHHHHHHHHHhc
Confidence 3789999999999999999999999999999999999876532 36778999999999999999999999
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
|++|++|||||.....++.+.+.++|++.+++|+.++++++|.++|+|.+++.++||++||.++..+.++..+|+++|+
T Consensus 72 -g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 150 (237)
T d1uzma1 72 -GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA 150 (237)
T ss_dssp -SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred -CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHH
Confidence 7999999999998888999999999999999999999999999999999999899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+++|+++|+.|++++|||||+|+||+++|+|.+..
T Consensus 151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~ 186 (237)
T d1uzma1 151 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL 186 (237)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS
T ss_pred HHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc
Confidence 999999999999999999999999999999998754
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3e-46 Score=294.60 Aligned_cols=188 Identities=27% Similarity=0.362 Sum_probs=173.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++ ....+++|++|.++++++++++.+++
T Consensus 2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~- 75 (242)
T d1ulsa_ 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL- 75 (242)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc-
Confidence 578999999999999999999999999999999999999888776654 25678999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
|++|++|||||....+++.+.+.++|++.+++|+.++++++|+++|+|.+++.+.++++|| .+..+.++..+|+++|+|
T Consensus 76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaa 154 (242)
T d1ulsa_ 76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAG 154 (242)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHH
T ss_pred CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHH
Confidence 7999999999998888999999999999999999999999999999999887777777766 467788899999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+.+|+++|+.|++++|||||+|+||+++|||.+..
T Consensus 155 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~ 189 (242)
T d1ulsa_ 155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV 189 (242)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS
T ss_pred HHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC
Confidence 99999999999999999999999999999998654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=7.4e-46 Score=294.16 Aligned_cols=191 Identities=31% Similarity=0.354 Sum_probs=178.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++. .+...+++|+++.++++++++++.+++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 78 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG---ERSMFVRHDVSSEADWTLVMAAVQRRL- 78 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---TTEEEECCCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEeecCCHHHHHHHHHHHHHHh-
Confidence 4789999999999999999999999999999999999999988887763 357788999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
|++|++|||||....+++.+.+.++|++.+++|+.+++++++.++|+|+++ .|+||++||.++..+.++..+|+++|+|
T Consensus 79 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaa 157 (253)
T d1hxha_ 79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHH
Confidence 799999999999888899999999999999999999999999999999765 4999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc--CCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~--~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+.+|+++++.|+++ +|||||+|+||+++|||.+...
T Consensus 158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~ 195 (253)
T d1hxha_ 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL 195 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhC
Confidence 99999999999987 4699999999999999988764
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=2.2e-45 Score=294.51 Aligned_cols=193 Identities=30% Similarity=0.405 Sum_probs=174.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC---CCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++... ..++..+++|+++.++++++++++.+
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999999999999998888654 35789999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCC----CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEE-ecCCccCcCCCCc
Q 027816 91 KFNGKLNILVNNVGTNIRKPT----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFI-SSVGGLSHVGSGS 165 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~----~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~-ss~~~~~~~~~~~ 165 (218)
++ |++|++|||||.....++ .+.+.++|++.+++|+.++++++|+++|+|++++ +.+|++ ||.++..+.++..
T Consensus 82 ~~-g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~ 159 (272)
T d1xkqa_ 82 QF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL 159 (272)
T ss_dssp HH-SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred Hh-CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcc
Confidence 99 799999999998765554 3567889999999999999999999999998876 455555 5567788999999
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.|+++|+|+.+|+++|+.|++++|||||+|+||+|+|||.+..
T Consensus 160 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 202 (272)
T d1xkqa_ 160 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM 202 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred hhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhcc
Confidence 9999999999999999999999999999999999999998754
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=3.3e-45 Score=292.89 Aligned_cols=193 Identities=27% Similarity=0.413 Sum_probs=177.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .+.++++|++|.++++++++++.+++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH- 80 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 4789999999999999999999999999999999999999999988886543 47788999999999999999999999
Q ss_pred CcccEEEecCCCCCCC--CCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC-chhhhh
Q 027816 94 GKLNILVNNVGTNIRK--PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG-SIYGAT 170 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~--~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~-~~Y~~s 170 (218)
|++|++|||||..... .+.+.+.++|++.+++|+.|+++++|+++|+|.+++.|+||+++|..+..+.++. ..|+++
T Consensus 81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as 160 (268)
T d2bgka1 81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT 160 (268)
T ss_dssp SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence 7999999999986543 4778999999999999999999999999999999888999999999988876654 589999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
|+|+++|+++++.||+++|||||+|+||+++|||.++.
T Consensus 161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 198 (268)
T d2bgka1 161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV 198 (268)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS
T ss_pred HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhh
Confidence 99999999999999999999999999999999997654
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.9e-45 Score=292.67 Aligned_cols=193 Identities=32% Similarity=0.444 Sum_probs=166.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ ..+..+++|+++.++++++++++.+
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999999999999988886543 4689999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCC----CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecC-CccCcCCCCc
Q 027816 91 KFNGKLNILVNNVGTNIR----KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSV-GGLSHVGSGS 165 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~-~~~~~~~~~~ 165 (218)
++ |++|++|||||...+ .++.+.+.|+|++.+++|++++++++|+++|+|++++ +.+|+++|. ++..+.++..
T Consensus 82 ~~-g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~ 159 (264)
T d1spxa_ 82 KF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP 159 (264)
T ss_dssp HH-SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred Hh-CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCch
Confidence 99 799999999997643 3455678999999999999999999999999998775 566666665 4577899999
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 166 IYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 166 ~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.|+++|+|+++|+++|+.|++++|||||+|+||+|+|||.+..
T Consensus 160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~ 202 (264)
T d1spxa_ 160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM 202 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----
T ss_pred hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhcc
Confidence 9999999999999999999999999999999999999998754
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.9e-45 Score=288.91 Aligned_cols=188 Identities=31% Similarity=0.416 Sum_probs=172.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++. .+..+.+|++|.++++++++ ++
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~----~~ 72 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALG----GI 72 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hc
Confidence 36899999999999999999999999999999999999998888776653 36778999999999877665 45
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhH-hCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~-~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
|++|++|||||....+++.+.+.++|++.+++|+.++++++|.+.|+|. ++..|+||+++|.++..+.++..+|+++|
T Consensus 73 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK 151 (242)
T d1cyda_ 73 -GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK 151 (242)
T ss_dssp -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence 7999999999998888999999999999999999999999999999754 45668999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+|+.+|+++|+.|++++|||||+|+||+++|||.++..
T Consensus 152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~ 189 (242)
T d1cyda_ 152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS 189 (242)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT
T ss_pred HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhc
Confidence 99999999999999999999999999999999988764
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=6.6e-45 Score=291.96 Aligned_cols=194 Identities=27% Similarity=0.393 Sum_probs=178.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++..+++|+++.++++++++++.+
T Consensus 1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 80 (274)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999999999888886543 4789999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCC--CCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 91 KFNGKLNILVNNVGTNIRK--PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~--~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
++ |++|++|||||..... ...+.+.++|++.+++|+.++++++|+++|+|.+++.++|+++||.++..+.++...|+
T Consensus 81 ~~-G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~ 159 (274)
T d1xhla_ 81 KF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYA 159 (274)
T ss_dssp HH-SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHH
T ss_pred Hc-CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceeh
Confidence 99 7999999999975433 34457899999999999999999999999999998888999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++|+|+.+|+++++.|++++|||||+|+||+|+|||.+..
T Consensus 160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~ 199 (274)
T d1xhla_ 160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM 199 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhh
Confidence 9999999999999999999999999999999999998754
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-45 Score=288.51 Aligned_cols=187 Identities=29% Similarity=0.417 Sum_probs=171.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.+|++|.++++++++ ++
T Consensus 3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~~ 74 (244)
T d1pr9a_ 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV 74 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hh
Confidence 46899999999999999999999999999999999999999888877653 36778999999999877665 45
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHh-HhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL-KASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l-~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
|++|++|||||....+++.+.+.++|++.+++|+.+++++++.++|+| ++++.|+||++||.++..+.++...|+++|
T Consensus 75 -g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asK 153 (244)
T d1pr9a_ 75 -GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTK 153 (244)
T ss_dssp -CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred -CCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhH
Confidence 799999999999888899999999999999999999999999999965 556679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+|+++|+++++.|++++|||||+|+||+++|||.+..
T Consensus 154 aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~ 190 (244)
T d1pr9a_ 154 GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQAT 190 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhh
Confidence 9999999999999999999999999999999998754
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-43 Score=281.28 Aligned_cols=197 Identities=24% Similarity=0.318 Sum_probs=181.2
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
-.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+ ..+.+++||+++.++++++++++.+
T Consensus 6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~ 85 (257)
T d1xg5a_ 6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 85 (257)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999998887653 5889999999999999999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCccCc--CCCCch
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSH--VGSGSI 166 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~~~--~~~~~~ 166 (218)
++ |++|++|||||....+++.+.+.++|++.+++|+.+++++.+.++|+|.+++ .|+||++||.++... .+....
T Consensus 86 ~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~ 164 (257)
T d1xg5a_ 86 QH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF 164 (257)
T ss_dssp HH-CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred hc-CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHH
Confidence 99 7999999999999889999999999999999999999999999999988754 589999999988654 445677
Q ss_pred hhhhHHHHHHHHHHHHHHh--ccCCeEEEEeecccccChhhHHHHh
Q 027816 167 YGATKAAMNQLTRNLACEW--AKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~--~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
|+++|+++.+|+++|+.|+ +++|||||+|+||+++|++......
T Consensus 165 Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~ 210 (257)
T d1xg5a_ 165 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD 210 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT
T ss_pred HHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcCh
Confidence 9999999999999999998 7889999999999999999887654
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=3.7e-44 Score=285.63 Aligned_cols=195 Identities=29% Similarity=0.446 Sum_probs=175.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++..+++|+++.++++++++++.++
T Consensus 5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (260)
T d1h5qa_ 5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 84 (260)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999988887777643 4677899999999999999999999999
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhH-hCCCCeEEEEecCCccC-------cCCC
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLK-ASGVGSIVFISSVGGLS-------HVGS 163 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~-~~~~~~iv~~ss~~~~~-------~~~~ 163 (218)
+ |++|++|||||.....++.+.+.++|++.+++|+.|++++++.+.|+|. +...+.|++.+|..... +.++
T Consensus 85 ~-g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~ 163 (260)
T d1h5qa_ 85 L-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLT 163 (260)
T ss_dssp S-CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECS
T ss_pred h-CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcc
Confidence 9 7999999999998888999999999999999999999999999999985 44556778877765443 3467
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
...|+++|+|+.+|++.++.|++++|||||+|+||+++|||.+..
T Consensus 164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~ 208 (260)
T d1h5qa_ 164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM 208 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS
T ss_pred ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc
Confidence 789999999999999999999999999999999999999997654
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.2e-44 Score=289.04 Aligned_cols=193 Identities=33% Similarity=0.453 Sum_probs=179.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-----CCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-----KGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
.++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+.++..+++|++|.++++++++++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999888887753 2568999999999999999999999
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
.+++ |++|++|||||.....++.+.+.++|++.+++|+.|+++++++++|+|.+++.++||++|+ .+..+.++...|+
T Consensus 89 ~~~~-G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~ 166 (297)
T d1yxma1 89 LDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSG 166 (297)
T ss_dssp HHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHH
T ss_pred HHHh-CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccch
Confidence 9999 6999999999998888999999999999999999999999999999999988888988865 4566788999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
++|+|+.+|+++++.|++++|||||+|+||+|+|+|..+.
T Consensus 167 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 206 (297)
T d1yxma1 167 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVEN 206 (297)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTT
T ss_pred hHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhh
Confidence 9999999999999999999999999999999999997543
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-43 Score=280.44 Aligned_cols=185 Identities=30% Similarity=0.410 Sum_probs=169.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+. ...+.++++|+++.++++++++++.+++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 80 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF- 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc-
Confidence 6999999999999999999999999999999999999999888887653 4678899999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC---CCeEEEEecCCccCcCCCCchhhhh
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG---VGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~---~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
|++|++|||||.... ++|++.+++|+.+++++.+.++|+|.+++ .|+||++||.++..+.++..+|+++
T Consensus 81 G~iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as 152 (254)
T d2gdza1 81 GRLDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS 152 (254)
T ss_dssp SCCCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCcCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHH
Confidence 799999999997432 35889999999999999999999997754 3789999999999999999999999
Q ss_pred HHHHHHHHHH--HHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRN--LACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~--l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+|+.+|+|+ |+.|++++|||||+|+||+|+|||++...
T Consensus 153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~ 193 (254)
T d2gdza1 153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE 193 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcc
Confidence 9999999997 79999999999999999999999987654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=2.4e-43 Score=280.78 Aligned_cols=194 Identities=24% Similarity=0.374 Sum_probs=177.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.++||++|||||++|||+++|++|+++|++|+++ .|+++..++..+++...+.++..+++|++|.++++++++++.+++
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999886 566666788888888888889999999999999999999999999
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-cCCCCchhhhhH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIYGATK 171 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~~~~~~~Y~~sK 171 (218)
|++|++|||||.....++.+.+.++|++.+++|+.++++++|.++|+|+++ +++++++|..+.. +.++...|+++|
T Consensus 83 -g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK 159 (259)
T d1ja9a_ 83 -GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSK 159 (259)
T ss_dssp -SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred -CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHH
Confidence 689999999999888889999999999999999999999999999999765 5777776655544 788999999999
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
+|+++|+|+|++|+++.|||||+|+||+++|||.+....
T Consensus 160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~ 198 (259)
T d1ja9a_ 160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSW 198 (259)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGG
T ss_pred HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhh
Confidence 999999999999999999999999999999999987653
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=3.6e-43 Score=282.07 Aligned_cols=188 Identities=28% Similarity=0.394 Sum_probs=169.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++++++..+++. .++..+.+|+++.++++++++++.+++
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~- 77 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG---DNVLGIVGDVRSLEDQKQAASRCVARF- 77 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CCeeEEecccccHHHHHHHHHHHHHHh-
Confidence 5789999999999999999999999999999999999998887776653 468889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCC-----CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhh
Q 027816 94 GKLNILVNNVGTNIRKP-----TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~-----~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
|++|++|+|||...... ..+.+.++|++.|++|+.|+++++|+++|+|++++ |+||+++|.++..+.++..+|+
T Consensus 78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~ 156 (276)
T d1bdba_ 78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYT 156 (276)
T ss_dssp SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHH
T ss_pred CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHH
Confidence 79999999999764332 23455677999999999999999999999998765 8999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
++|+|+.+|+++|+.|+++. ||||+|+||+|+|||..+
T Consensus 157 asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~ 194 (276)
T d1bdba_ 157 AAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGP 194 (276)
T ss_dssp HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCC
T ss_pred HHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCc
Confidence 99999999999999999875 999999999999998643
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.1e-43 Score=288.17 Aligned_cols=191 Identities=24% Similarity=0.351 Sum_probs=174.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC---------hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN---------EVELNKCLKEWQSKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~---------~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~ 83 (218)
+.++||++|||||++|||+++|++|+++|++|++.+++ .+.+++..+++..... ...+|+++.+++++
T Consensus 3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~~~~~~~~ 79 (302)
T d1gz6a_ 3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGEK 79 (302)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHHH
T ss_pred cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhccc---ccccccchHHHHHH
Confidence 47899999999999999999999999999999998654 4456666766665543 34688999999999
Q ss_pred HHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCC
Q 027816 84 LIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGS 163 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~ 163 (218)
+++++.+++ |++|++|||||....+++.+.+.++|++.+++|+.|+++++|+++|+|++++.|+||++||.++..+.++
T Consensus 80 ~v~~~~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~ 158 (302)
T d1gz6a_ 80 LVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG 158 (302)
T ss_dssp HHHHHHHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred HHHHHHHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC
Confidence 999999999 7999999999999889999999999999999999999999999999999988899999999999999999
Q ss_pred CchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHH
Q 027816 164 GSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 164 ~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~ 207 (218)
...|+++|+|+.+|+++|+.|++++|||||+|+||++.|++.+.
T Consensus 159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~ 202 (302)
T d1gz6a_ 159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV 202 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc
Confidence 99999999999999999999999999999999999998877653
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=7.6e-43 Score=279.73 Aligned_cols=198 Identities=25% Similarity=0.373 Sum_probs=179.6
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC-hhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN-EVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
...+++||++|||||++|||+++|++|+++|++|++++|+ ++.+++..+++...+.++..+++|+++.++++++++++.
T Consensus 12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 91 (272)
T d1g0oa_ 12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 91 (272)
T ss_dssp GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence 3457999999999999999999999999999999998776 556677888888888889999999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-cCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-HVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-~~~~~~~Y~ 168 (218)
+++ |++|++|+|+|.....++.+.+.++|++.+++|+.+++++++.++|+|.++ +++++++|..+.. +.++...|+
T Consensus 92 ~~~-g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~--g~~i~i~s~~~~~~~~~~~~~Y~ 168 (272)
T d1g0oa_ 92 KIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG--GRLILMGSITGQAKAVPKHAVYS 168 (272)
T ss_dssp HHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT--CEEEEECCGGGTCSSCSSCHHHH
T ss_pred HHh-CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc--cccccccccccccccccchhhHH
Confidence 999 799999999999888899999999999999999999999999999999765 6888888776544 567778899
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHhc
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMFS 211 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~~ 211 (218)
++|+|+++|++++++||+++|||||+|+||+++|+|.+.....
T Consensus 169 asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~ 211 (272)
T d1g0oa_ 169 GSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCRE 211 (272)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHh
Confidence 9999999999999999999999999999999999999887543
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-43 Score=284.49 Aligned_cols=190 Identities=21% Similarity=0.266 Sum_probs=165.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEE---EecCChhh---HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVH---TCSRNEVE---LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~---~~~r~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.|+||||||++|||+++|++|+++|++|+ .+.|+.+. +.+..+++...+..+..+.+|++|.++++++++++.+
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 47899999999999999999999998644 44555443 3444555555677899999999999999999988743
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+.+|++++|||....+++.+.+.++|++.+++|+.|+++++++++|+|.+++.|+||++||.++..+.++..+|++|
T Consensus 82 ---g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~as 158 (285)
T d1jtva_ 82 ---GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS 158 (285)
T ss_dssp ---SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred ---cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHH
Confidence 68999999999998889999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+|+.+|+++|+.|++++|||||+|+||+|+|+|.++..
T Consensus 159 Kaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~ 197 (285)
T d1jtva_ 159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVL 197 (285)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhc
Confidence 999999999999999999999999999999999987653
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.1e-42 Score=274.30 Aligned_cols=195 Identities=24% Similarity=0.217 Sum_probs=175.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHh---CCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAG---LGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
.++||+++||||++|||+++|++|++ +|++|++++|++++++++.+++... +.++..+++|+++.++++++++.+
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 57899999999999999999999986 7999999999999999998888653 568999999999999999999988
Q ss_pred Hhh---cCCcccEEEecCCCCC---CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC--CCeEEEEecCCccCc
Q 027816 89 GSK---FNGKLNILVNNVGTNI---RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG--VGSIVFISSVGGLSH 160 (218)
Q Consensus 89 ~~~---~~~~id~vv~~ag~~~---~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~--~~~iv~~ss~~~~~~ 160 (218)
.+. .++.+|++++|||... .+++.+.++++|++.|++|+.+++++++.++|+|++++ .++||++||.++..+
T Consensus 83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~ 162 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence 763 2357899999999753 34577899999999999999999999999999998765 479999999999999
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
.+++..|+++|+|+++|+++|+.| .+|||||+|+||+|+|+|.+....
T Consensus 163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~ 210 (259)
T d1oaaa_ 163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARE 210 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhh
Confidence 999999999999999999999999 679999999999999999886543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-42 Score=274.41 Aligned_cols=193 Identities=25% Similarity=0.288 Sum_probs=180.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++. ..+..+....+|.++.+.++..++.+.+.+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~- 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM- 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-
Confidence 899999999999999999999999999999999999999998887764 446788899999999999999999999998
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
+.+|++++|||.....++.+.+.++|++.+++|+.|++.+++.++|+|++. .|+||++||.++..+.++..+|++||+|
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaa 169 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFA 169 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHH
Confidence 789999999999888888999999999999999999999999999999865 4899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc--CCeEEEEeecccccChhhHHHH
Q 027816 174 MNQLTRNLACEWAK--DNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 174 ~~~~~~~l~~e~~~--~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
+++|+++|+.|+++ .||+||+|+||+|+|+|.++..
T Consensus 170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~ 207 (269)
T d1xu9a_ 170 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV 207 (269)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS
T ss_pred HHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc
Confidence 99999999999974 5799999999999999988764
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=1.2e-42 Score=275.70 Aligned_cols=187 Identities=19% Similarity=0.229 Sum_probs=165.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh-hCCCeEEEEEeeCC-CHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ-SKGFVVSGSVCDAA-SPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~v~~~~~D~~-~~~~~~~~~~~~~~ 90 (218)
++++||++|||||++|||+++|++|+++|++|++++|+.++.+...+... .....+..+.+|++ +.++++++++++.+
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999888887766554433222 34568999999998 67889999999999
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC---CCCeEEEEecCCccCcCCCCchh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS---GVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~---~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
++ |++|+||+|||.. +.++|++.+++|+.|++++++.++|+|.++ ..++||++||.++..+.+++..|
T Consensus 81 ~~-g~iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y 151 (254)
T d1sbya1 81 QL-KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY 151 (254)
T ss_dssp HH-SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred Hc-CCCCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence 99 6999999999953 346689999999999999999999999765 35789999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|+|+.+|+++|+.|+.++|||||+|+||+|+|||.+..
T Consensus 152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~ 192 (254)
T d1sbya1 152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF 192 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC
T ss_pred HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccc
Confidence 99999999999999999999999999999999999997754
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=6.4e-43 Score=275.35 Aligned_cols=188 Identities=26% Similarity=0.353 Sum_probs=165.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++..+++|+++.++++++++++.+++
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~~- 77 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF- 77 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence 478999999999999999999999999999999999998887766554 4578889999999999999999999999
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
|++|++|||||.....++.+.+.++|.+.+++|+.+++.++|.++|+|.++ +.++++|+. +..+.++...|+++|+|
T Consensus 78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~-a~~~~~~~~~Y~~sK~a 154 (241)
T d2a4ka1 78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSV-AGLGAFGLAHYAAGKLG 154 (241)
T ss_dssp SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCC-TTCCHHHHHHHHHCSSH
T ss_pred CCccEeccccccccccchhhhhccccccccccccccccccccccccccccc--cceeecccc-ccccccCccccchhhHH
Confidence 799999999999888899999999999999999999999999999988654 355555554 45555788999999999
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|++.|++|++++|||||+|+||+++|||.+..
T Consensus 155 l~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~ 189 (241)
T d2a4ka1 155 VVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL 189 (241)
T ss_dssp HHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS
T ss_pred HHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh
Confidence 99999999999999999999999999999997654
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=2.4e-43 Score=279.61 Aligned_cols=181 Identities=22% Similarity=0.230 Sum_probs=166.4
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
++|||||++|||+++|++|+++|++|++++|+.+..++..+.... ..++|+++.++++++++++.+++ |++|+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi 74 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV 74 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence 789999999999999999999999999999998887665443221 23589999999999999999999 79999
Q ss_pred EEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHH
Q 027816 99 LVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQL 177 (218)
Q Consensus 99 vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 177 (218)
+|||||... .+++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.++..+|+++|+|+.+|
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l 154 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL 154 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence 999999764 4688899999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 178 TRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 178 ~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+|+|+.|++++|||||+|+||+++|+|.+
T Consensus 155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~ 183 (252)
T d1zmta1 155 ANALSKELGEYNIPVFAIGPNYLHSEDSP 183 (252)
T ss_dssp HHHHHHHHGGGTCCEEEEEESSBCCBTCC
T ss_pred HHHHHHHhcccCcEEEEEecCCCcCcchh
Confidence 99999999999999999999999999864
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=3e-42 Score=270.50 Aligned_cols=179 Identities=28% Similarity=0.388 Sum_probs=161.9
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++||++|||||++|||+++|++|+++|++|++++|+++.+++. + ...+.+|+++. ++.+.+++ +
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~--~~~~~~Dv~~~------~~~~~~~~-g 65 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------G--HRYVVCDLRKD------LDLLFEKV-K 65 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------C--SEEEECCTTTC------HHHHHHHS-C
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------C--CcEEEcchHHH------HHHHHHHh-C
Confidence 6899999999999999999999999999999999998765432 2 34567999763 34455666 7
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
++|++|||||.....++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||+++|..+..+.++...|+++|+|+
T Consensus 66 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal 145 (234)
T d1o5ia_ 66 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL 145 (234)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence 99999999999888889999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 175 NQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
.+|++++++|++++|||||+|+||+++|+|.+...
T Consensus 146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~ 180 (234)
T d1o5ia_ 146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL 180 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS
T ss_pred HHHHHHHHHHhcccCeEEeecccCccchhhhhhhc
Confidence 99999999999999999999999999999988754
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=9.6e-42 Score=271.01 Aligned_cols=193 Identities=22% Similarity=0.214 Sum_probs=165.3
Q ss_pred CccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 13 WSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 13 ~~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++++||++|||||+| |||+++|++|+++|++|++++|+++..+...+ ..........+++|+++.++++++++++.+
T Consensus 4 ~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (256)
T d1ulua_ 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEK-LAEALGGALLFRADVTQDEELDALFAGVKE 82 (256)
T ss_dssp ECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHH-hhhccCcccccccccCCHHHHHHHHHHHHH
Confidence 478999999999987 99999999999999999999998766554433 333444567889999999999999999999
Q ss_pred hcCCcccEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCch
Q 027816 91 KFNGKLNILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~ 166 (218)
++ |++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.+.|+|+++ |+||++||..+..+.++..+
T Consensus 83 ~~-g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~--G~Iv~isS~~~~~~~~~~~~ 159 (256)
T d1ulua_ 83 AF-GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG--GGIVTLTYYASEKVVPKYNV 159 (256)
T ss_dssp HH-SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE--EEEEEEECGGGTSBCTTCHH
T ss_pred hc-CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC--CEEEEEeehHhcCCCCCchH
Confidence 99 79999999999764 2456688999999999999999999999999998754 79999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++|+|+++|+++++.||+++|||||+|+||+++|++.+...
T Consensus 160 Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~ 202 (256)
T d1ulua_ 160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP 202 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh
Confidence 9999999999999999999999999999999999999877543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-41 Score=267.16 Aligned_cols=187 Identities=26% Similarity=0.353 Sum_probs=166.7
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.++||++|||||++|||+++|++|+++|++|++++|+++++++..+ ...+....+|+.+.+.++...+ .+
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~~----~~- 72 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFAN----EV- 72 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHHH----HC-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccccc----cc-
Confidence 3789999999999999999999999999999999999887665432 2346778889988777665554 44
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-CcCCCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~~sK~ 172 (218)
+.+|++|||||....+++.+.+.++|++.+++|+.+++++++.+.|+|.+++.|+||+++|.++. .+.++...|+++|+
T Consensus 73 ~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKa 152 (245)
T d2ag5a1 73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKA 152 (245)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHH
T ss_pred ccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHH
Confidence 68999999999998888999999999999999999999999999999999988999999998775 46788899999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMF 210 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~ 210 (218)
|+++|+|+|+.||+++|||||+|+||+++|||.+....
T Consensus 153 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~ 190 (245)
T d2ag5a1 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQ 190 (245)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhh
Confidence 99999999999999999999999999999999886543
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-42 Score=275.99 Aligned_cols=189 Identities=28% Similarity=0.385 Sum_probs=169.5
Q ss_pred Cc-EEEEecCCCchHHHHHHHHHhC-CCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GM-TALVTGGTRGIGQATVEELAGL-GAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k-~vlItGa~~giG~~la~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
|| ++|||||++|||+++|++|+++ |++|++++|+.+++++..+++...+..+.+++||++|.++++++++++.+++ +
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-G 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-C
Confidence 55 5699999999999999999986 8999999999999999999998888889999999999999999999999999 7
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc--------------
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-------------- 160 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-------------- 160 (218)
++|++|||||.....+..+.+.++|++.|++|++|++++++.++|+|+++ |+||+++|..+..+
T Consensus 81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--g~ivnisS~~~~~~~~~~~~y~~~k~~~ 158 (275)
T d1wmaa1 81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRS 158 (275)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCcccccccceeccccccchhhhhhhcc
Confidence 99999999999877788888899999999999999999999999999654 79999999765332
Q ss_pred ---------------------------CCCCchhhhhHHHHHHHHHHHHHHhcc----CCeEEEEeecccccChhhHHH
Q 027816 161 ---------------------------VGSGSIYGATKAAMNQLTRNLACEWAK----DNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 161 ---------------------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~----~gv~v~~v~PG~v~t~~~~~~ 208 (218)
..+...|++||+++.+|++.+++|+++ .||+||+|+||+|+|+|.++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~ 237 (275)
T d1wmaa1 159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK 237 (275)
T ss_dssp SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence 122356999999999999999999875 499999999999999997643
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=9.6e-41 Score=264.05 Aligned_cols=190 Identities=25% Similarity=0.283 Sum_probs=166.2
Q ss_pred CcEEEEecCCCchHHHHHHHHH---hCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh--h
Q 027816 17 GMTALVTGGTRGIGQATVEELA---GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS--K 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~--~ 91 (218)
.|+||||||++|||+++|++|+ ++|++|++++|+++++++..+ +.....++.++++|++|.++++++++++.+ +
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 80 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence 4799999999999999999996 578999999999998876544 334456789999999999999999998854 5
Q ss_pred cCCcccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-----------CCCeEEEEecCCccC
Q 027816 92 FNGKLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-----------GVGSIVFISSVGGLS 159 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-----------~~~~iv~~ss~~~~~ 159 (218)
+ +++|++|||||.... .++.+.+.++|++.+++|+.|+++++++++|+|+++ ..+++|+++|..+..
T Consensus 81 ~-~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~ 159 (248)
T d1snya_ 81 D-QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI 159 (248)
T ss_dssp G-GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred c-CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 5 689999999998654 457789999999999999999999999999999764 358999999988765
Q ss_pred ---cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 160 ---HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 160 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+.++...|++||+|+.+|+++++.|+++.||+||+|+||+|+|+|.++.
T Consensus 160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~ 211 (248)
T d1snya_ 160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS 211 (248)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT
T ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccccc
Confidence 3556779999999999999999999999999999999999999998654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=6.6e-40 Score=265.22 Aligned_cols=198 Identities=25% Similarity=0.313 Sum_probs=175.2
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh-CCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS-KGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
|..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.. .+..+..+++|+++.++++++++.+.
T Consensus 19 ~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 98 (294)
T d1w6ua_ 19 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI 98 (294)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhh
Confidence 34689999999999999999999999999999999999999999888877753 36778899999999999999999999
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHh-CCCCeEEEEecCCccCcCCCCchhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKA-SGVGSIVFISSVGGLSHVGSGSIYG 168 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~-~~~~~iv~~ss~~~~~~~~~~~~Y~ 168 (218)
+++ +++|++|+|||.....++.+.+.++|++.+.+|+.+.+.+.+...+.+.. ...+.+++++|.++..+.++..+|+
T Consensus 99 ~~~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ys 177 (294)
T d1w6ua_ 99 KVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA 177 (294)
T ss_dssp HHT-CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred hhc-cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHH
Confidence 998 79999999999988888889999999999999999999998887766654 4556788888888888999999999
Q ss_pred hhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 169 ATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 169 ~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
++|+|+++|++.++.|++++|||||+|+||+|+|++.+...
T Consensus 178 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~ 218 (294)
T d1w6ua_ 178 SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL 218 (294)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------C
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhcc
Confidence 99999999999999999999999999999999999976643
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-40 Score=258.68 Aligned_cols=194 Identities=24% Similarity=0.321 Sum_probs=169.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++. .......+|+.+.+++++.+..+...+
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG---NNCVFAPADVTSEKDVQTALALAKGKF- 77 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---CCccccccccccccccccccccccccc-
Confidence 7899999999999999999999999999999999999999988877764 357778899999999999999998887
Q ss_pred CcccEEEecCCCCCC------CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC------CCCeEEEEecCCccCcC
Q 027816 94 GKLNILVNNVGTNIR------KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS------GVGSIVFISSVGGLSHV 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~------~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~------~~~~iv~~ss~~~~~~~ 161 (218)
+.+|.++++++.... .+..+.+.++|++.+++|+.+++++++++.|+|..+ +.|+||++||.++..+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~ 157 (248)
T d2o23a1 78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ 157 (248)
T ss_dssp SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence 688999998876432 345567889999999999999999999999998654 45799999999999999
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHhc
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMFS 211 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~~ 211 (218)
++..+|+++|+|+++|+++|++|++++|||||+|+||+++|+|.+....+
T Consensus 158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~ 207 (248)
T d2o23a1 158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK 207 (248)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH
Confidence 99999999999999999999999999999999999999999998876543
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=7.8e-40 Score=259.09 Aligned_cols=191 Identities=24% Similarity=0.264 Sum_probs=157.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
|+.|+||||||++|||+++|++|+++|+ +|++++|+.++++++.+. ....+..+++|+++.++++++++++.+.+
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~---~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 77 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh---hCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence 3569999999999999999999999996 689999999887765432 34568899999999999999999999987
Q ss_pred CC-cccEEEecCCCCC-CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-----------CCeEEEEecCCccC
Q 027816 93 NG-KLNILVNNVGTNI-RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-----------VGSIVFISSVGGLS 159 (218)
Q Consensus 93 ~~-~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-----------~~~iv~~ss~~~~~ 159 (218)
+. ++|++|+|||... ..++.+.+.++|++.|++|+.|++++++.++|+|++++ .++++++++.....
T Consensus 78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~ 157 (250)
T d1yo6a1 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence 42 4999999999764 46778899999999999999999999999999997642 26788888765544
Q ss_pred cC-------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 160 HV-------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 160 ~~-------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
.. .+...|++||+|+.+|+++|+.|+++.||+||+|+||+|+|+|.++.
T Consensus 158 ~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~ 213 (250)
T d1yo6a1 158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN 213 (250)
T ss_dssp TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------
T ss_pred cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC
Confidence 32 23456999999999999999999999999999999999999997643
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.4e-38 Score=246.01 Aligned_cols=184 Identities=17% Similarity=0.159 Sum_probs=160.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC-C
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (218)
+||+||||||++|||+++|++|+++|++|+++++++... ........+|..+.++.+.+.+.+.+.++ +
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE----------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQ 70 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT----------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence 489999999999999999999999999999998876431 12344567888888898888888877663 3
Q ss_pred cccEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHH
Q 027816 95 KLNILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAA 173 (218)
Q Consensus 95 ~id~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 173 (218)
++|++|||||.... .+..+.+.++|++.|++|+.+++++++.++|+|+++ |+||++||.++..+.++..+|++||+|
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaa 148 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGA 148 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc--cceeEEccHHHcCCccCCcccHHHHHH
Confidence 79999999997544 455677789999999999999999999999999653 799999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--cCCeEEEEeecccccChhhHHHHhc
Q 027816 174 MNQLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERVMFS 211 (218)
Q Consensus 174 ~~~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~~~~~ 211 (218)
+++|+++|+.|++ +.|||||+|+||+++|||.++.+..
T Consensus 149 l~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~ 188 (236)
T d1dhra_ 149 VHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE 188 (236)
T ss_dssp HHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT
T ss_pred HHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc
Confidence 9999999999998 5799999999999999999877644
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.3e-36 Score=238.28 Aligned_cols=182 Identities=17% Similarity=0.159 Sum_probs=155.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc-CCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF-NGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~-~~~i 96 (218)
++||||||++|||+++|++|+++|++|++++|++++.. .......+|..+.++.....+.+...+ .+++
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 72 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV 72 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence 45799999999999999999999999999999875321 234455678888888877777766643 2689
Q ss_pred cEEEecCCCCCC-CCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHHH
Q 027816 97 NILVNNVGTNIR-KPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAMN 175 (218)
Q Consensus 97 d~vv~~ag~~~~-~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 175 (218)
|+||||||.... .+..+.+.++|+..+++|+++++++++.++|+|+++ |+||++||..+..+.++..+|+++|+|++
T Consensus 73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~Iv~isS~~~~~~~~~~~~Y~asKaal~ 150 (235)
T d1ooea_ 73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAVH 150 (235)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE--EEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc--eEEEEeccHHhcCCcccccchHHHHHHHH
Confidence 999999997654 345556678899999999999999999999999653 79999999999999999999999999999
Q ss_pred HHHHHHHHHhc--cCCeEEEEeecccccChhhHHHHhc
Q 027816 176 QLTRNLACEWA--KDNIRTNSVAPWYTKTSLVERVMFS 211 (218)
Q Consensus 176 ~~~~~l~~e~~--~~gv~v~~v~PG~v~t~~~~~~~~~ 211 (218)
+|+++|+.|++ +.+|+||+|+||+++|+|.++.+.+
T Consensus 151 ~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~ 188 (235)
T d1ooea_ 151 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN 188 (235)
T ss_dssp HHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT
T ss_pred HHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC
Confidence 99999999998 4699999999999999999987654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-35 Score=235.35 Aligned_cols=190 Identities=17% Similarity=0.218 Sum_probs=165.8
Q ss_pred cCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++||++|||||+| |||+++|+.|+++|++|++++|+++..+.. +++............|.++.+++.+.++++.+.+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 6899999999999 899999999999999999999997655544 3443444456778899999999999999999998
Q ss_pred CCcccEEEecCCCCCCCCC-----CCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 93 NGKLNILVNNVGTNIRKPT-----IEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~-----~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+++|++|+|++......+ .....+.|...+++|+.+.+.+.+.+.+.+++. +.|+++||..+..+.++...|
T Consensus 82 -~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Ii~iss~~~~~~~~~~~~Y 158 (258)
T d1qsga_ 82 -PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG--SALLTLSYLGAERAIPNYNVM 158 (258)
T ss_dssp -SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSBCTTTTHH
T ss_pred -cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC--cEEEEecchhhccCCCCcHHH
Confidence 799999999988654333 245667789999999999999999999988553 579999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|+|+++|++++++||+++|||||+|+||+|+|+|.+..
T Consensus 159 ~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 199 (258)
T d1qsga_ 159 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI 199 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS
T ss_pred HHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc
Confidence 99999999999999999999999999999999999998754
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=1.7e-34 Score=231.78 Aligned_cols=185 Identities=21% Similarity=0.225 Sum_probs=150.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecC-ChhhHHHHHHHhhhC-CCeEE-----------------EEEeeCCCH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSR-NEVELNKCLKEWQSK-GFVVS-----------------GSVCDAASP 78 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~-~~~v~-----------------~~~~D~~~~ 78 (218)
.++|||||++|||+++|++|+++|++|+++++ +++..+...+++... ..... ...+|+++.
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 38999999999999999999999999988765 455566666666432 22333 345679999
Q ss_pred HHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHH--------------HHHHhhhhhHHHHHHHHhHHhH--
Q 027816 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYS--------------KIMTTNFESTYHLCQLVYPLLK-- 142 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~--------------~~~~~nv~~~~~~~~~~~~~l~-- 142 (218)
++++++++++.+++ |++|++|||||.....++.+.+.++|+ ..|.+|+.+++++.+.+.+.+.
T Consensus 83 ~~v~~~~~~~~~~~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 83 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHh-CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 99999999999999 799999999999877777776665554 4789999999999999887653
Q ss_pred ----hCCCCeEEEEecCCccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 143 ----ASGVGSIVFISSVGGLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 143 ----~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+...++|++++|.....+.++..+|+++|+|+.+|++++++||+++|||||+|+||++.+.
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~ 226 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 226 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc
Confidence 3345789999999999999999999999999999999999999999999999999986654
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.3e-35 Score=241.98 Aligned_cols=188 Identities=20% Similarity=0.206 Sum_probs=156.5
Q ss_pred CcEEEEec--CCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC------------CCeEEEE-----------
Q 027816 17 GMTALVTG--GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------------GFVVSGS----------- 71 (218)
Q Consensus 17 ~k~vlItG--a~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~v~~~----------- 71 (218)
+|++|||| +++|||+++|++|+++|++|++++++.............+ .......
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 68999999 5579999999999999999999998876544333221110 1111122
Q ss_pred ---------EeeCCCHHHHHHHHHHHHhhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHH
Q 027816 72 ---------VCDAASPDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPL 140 (218)
Q Consensus 72 ---------~~D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~ 140 (218)
.+|+++.++++++++++.+++ |++|++|||+|... .+++.+.+.++|++.+++|++++++++|+++|+
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~ 160 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence 247778888999999999999 79999999999764 357888999999999999999999999999999
Q ss_pred hHhCCCCeEEEEecCCccCcCCC-CchhhhhHHHHHHHHHHHHHHhcc-CCeEEEEeecccccChhhHH
Q 027816 141 LKASGVGSIVFISSVGGLSHVGS-GSIYGATKAAMNQLTRNLACEWAK-DNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 141 l~~~~~~~iv~~ss~~~~~~~~~-~~~Y~~sK~a~~~~~~~l~~e~~~-~gv~v~~v~PG~v~t~~~~~ 207 (218)
|+++ |+||++||.++..+.|+ ...|+++|+++++|++.|+.||++ +|||||+|+||+|+|++.+.
T Consensus 161 m~~~--GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~ 227 (329)
T d1uh5a_ 161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATA 227 (329)
T ss_dssp EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGG
T ss_pred cccc--cccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhc
Confidence 9653 79999999999888876 568999999999999999999986 59999999999999966554
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1e-34 Score=227.76 Aligned_cols=179 Identities=22% Similarity=0.226 Sum_probs=154.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|++|||||++|||+++|++|+++|++|++++|+++. .+....++|+++......+.....+.. ..
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~ 66 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA--PL 66 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS--CE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc--cc
Confidence 5899999999999999999999999999999998653 235667899999999999988887775 44
Q ss_pred cEEEecCCCCC----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHh------HhCCCCeEEEEecCCccCcCCCCch
Q 027816 97 NILVNNVGTNI----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLL------KASGVGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 97 d~vv~~ag~~~----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l------~~~~~~~iv~~ss~~~~~~~~~~~~ 166 (218)
+.++.+++... .......+.+.|++.+++|+.+.+.+++.+.+.+ .+++.|+||++||..+..+.++..+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~ 146 (241)
T d1uaya_ 67 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA 146 (241)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred cchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchh
Confidence 55666665432 2344567889999999999999999999999884 3445689999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
|+++|+|+++|+++|+.|++++|||||+|+||+++|+|.+...
T Consensus 147 Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~ 189 (241)
T d1uaya_ 147 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP 189 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh
Confidence 9999999999999999999999999999999999999987543
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=4.4e-33 Score=221.81 Aligned_cols=191 Identities=17% Similarity=0.155 Sum_probs=161.2
Q ss_pred ccCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
-++||++||||| ++|||+++|++|+++|++|++++|+.++..+...+ ..+.+...+++|+++.++++++++.+.+.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~~ 80 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD--RLPAKAPLLELDVQNEEHLASLAGRVTEA 80 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT--TSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH--HcCCceeeEeeecccccccccccchhhhc
Confidence 368999999995 57999999999999999999999998776443322 23455677899999999999999999876
Q ss_pred cC--CcccEEEecCCCCC-----CCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC
Q 027816 92 FN--GKLNILVNNVGTNI-----RKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG 164 (218)
Q Consensus 92 ~~--~~id~vv~~ag~~~-----~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~ 164 (218)
++ +++|+++||+|+.. ..++.+.+.++|.+.+++|+.+.+...+...+.+.. +.+++++|.....+.|+.
T Consensus 81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~ 157 (268)
T d2h7ma1 81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAY 157 (268)
T ss_dssp HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTT
T ss_pred cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCccc
Confidence 52 47999999999753 234567889999999999999999999988766533 346666777788888999
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
..|+++|+|+.+++++++.|+++.|||||+|+||+++|++.++..
T Consensus 158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~ 202 (268)
T d2h7ma1 158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIV 202 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHH
T ss_pred chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhc
Confidence 999999999999999999999999999999999999999987655
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=3.7e-33 Score=223.05 Aligned_cols=191 Identities=21% Similarity=0.256 Sum_probs=155.7
Q ss_pred ccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 14 ~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.|+||++|||||+| |||+++|++|+++|++|++++|+++. ++..+++...+.......+|+++.++++++++++.+.
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~-~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESL-EKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD 80 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTT-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence 36899999999875 99999999999999999999999654 3445555555666778899999999999999999999
Q ss_pred cCCcccEEEecCCCCCCC----CCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchh
Q 027816 92 FNGKLNILVNNVGTNIRK----PTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIY 167 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~----~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y 167 (218)
+ +++|++|+|+|..... ...+..++.+...+.++.++...+.+...+... ..+.|+++++.+...+.+....|
T Consensus 81 ~-g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~~~~~~~y 157 (274)
T d2pd4a1 81 L-GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NGASVLTLSYLGSTKYMAHYNVM 157 (274)
T ss_dssp T-SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTCHHH
T ss_pred c-CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc--cCcceeeecccccccccccchhh
Confidence 9 7999999999976432 333455566666666677777666666655432 22457777777778888888999
Q ss_pred hhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHH
Q 027816 168 GATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERV 208 (218)
Q Consensus 168 ~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~ 208 (218)
+++|+|+.+++++++.|+++.|||||+|+||+++|+|.+..
T Consensus 158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~ 198 (274)
T d2pd4a1 158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI 198 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS
T ss_pred hHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccccc
Confidence 99999999999999999999999999999999999988643
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=3.8e-33 Score=221.37 Aligned_cols=180 Identities=21% Similarity=0.220 Sum_probs=155.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCCh---hhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNE---VELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|||||++|||+++|++|+++|+ +|++++|+. +..++..+++...+..+.++.||++|.++++++++.+.+.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~- 87 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD- 87 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence 35999999999999999999999998 699998874 3456677777777889999999999999999999988665
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+++|.|+||+|.....++.+.+.++|++.+++|+.+.+++.+.+ ...+.++||++||+++..+.++...|+++|+
T Consensus 88 -~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka 162 (259)
T d2fr1a1 88 -VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGNA 162 (259)
T ss_dssp -SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHH
T ss_pred -ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHHH
Confidence 47999999999998889999999999999999999999988765 4456689999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccCh-hhH
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTS-LVE 206 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~-~~~ 206 (218)
++++|++.++. .|+++++|+||++.++ |.+
T Consensus 163 ~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~ 193 (259)
T d2fr1a1 163 YLDGLAQQRRS----DGLPATAVAWGTWAGSGMAE 193 (259)
T ss_dssp HHHHHHHHHHH----TTCCCEEEEECCBC------
T ss_pred hHHHHHHHHHh----CCCCEEECCCCcccCCcccc
Confidence 99988776655 4999999999988543 443
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=3e-33 Score=225.94 Aligned_cols=192 Identities=23% Similarity=0.235 Sum_probs=152.6
Q ss_pred CccCCcEEEEecCCC--chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC------------CCeEEEEEee----
Q 027816 13 WSLKGMTALVTGGTR--GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------------GFVVSGSVCD---- 74 (218)
Q Consensus 13 ~~~~~k~vlItGa~~--giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~v~~~~~D---- 74 (218)
++++||++|||||+| |||+++|++|+++|++|++++|+.............. ...-....+|
T Consensus 4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T d1d7oa_ 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 578999999999986 9999999999999999999999765443322221110 0011122222
Q ss_pred ----------------CCCHHHHHHHHHHHHhhcCCcccEEEecCCCCC--CCCCCCCCHHHHHHHHHhhhhhHHHHHHH
Q 027816 75 ----------------AASPDQREKLIQEVGSKFNGKLNILVNNVGTNI--RKPTIEYSAEEYSKIMTTNFESTYHLCQL 136 (218)
Q Consensus 75 ----------------~~~~~~~~~~~~~~~~~~~~~id~vv~~ag~~~--~~~~~~~~~~~~~~~~~~nv~~~~~~~~~ 136 (218)
.++..+++++++++.+++ |++|++|||||... ..++.+.+.++|++.+++|+++.++++++
T Consensus 84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 162 (297)
T d1d7oa_ 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH 162 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhH
Confidence 345567788999999999 79999999999754 45788999999999999999999999999
Q ss_pred HhHHhHhCCCCeEEEEecCCcc-CcCCCCchhhhhHHHHHHHHHHHHHHhc-cCCeEEEEeecccccChhhHH
Q 027816 137 VYPLLKASGVGSIVFISSVGGL-SHVGSGSIYGATKAAMNQLTRNLACEWA-KDNIRTNSVAPWYTKTSLVER 207 (218)
Q Consensus 137 ~~~~l~~~~~~~iv~~ss~~~~-~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~gv~v~~v~PG~v~t~~~~~ 207 (218)
+++.+.++ +.++++++.... ...+....|+++|+++.++++.++.|++ ++|||||+|+||+++|++.+.
T Consensus 163 ~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~ 233 (297)
T d1d7oa_ 163 FLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA 233 (297)
T ss_dssp HGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred HHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhh
Confidence 99988665 456666655444 4457778999999999999999999996 579999999999999999764
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=1.1e-31 Score=213.38 Aligned_cols=187 Identities=22% Similarity=0.204 Sum_probs=151.5
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HHHHHHHhhhC-CCeEEEEEeeCC----CHHHHHHHHHHHHhhc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSK-GFVVSGSVCDAA----SPDQREKLIQEVGSKF 92 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~D~~----~~~~~~~~~~~~~~~~ 92 (218)
++|||||++|||+++|++|+++|++|++++|+.++ .++..+++... .......++|.. ..+.++++++.+.+++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999998665 45566666433 445555655444 4677888889999999
Q ss_pred CCcccEEEecCCCCCCCCCCC-----------CCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-----CCCeEEEEecCC
Q 027816 93 NGKLNILVNNVGTNIRKPTIE-----------YSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-----GVGSIVFISSVG 156 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~-----------~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-----~~~~iv~~ss~~ 156 (218)
|++|++|||||...+.++.+ ...+.+.+.+..|+.+.+...+...+.+... ..+.++++++..
T Consensus 83 -g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 83 -GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp -SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred -CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 79999999999876544332 2344567788889999998888877766543 345788889999
Q ss_pred ccCcCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhH
Q 027816 157 GLSHVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVE 206 (218)
Q Consensus 157 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~ 206 (218)
+..+.+++..|++||++++++++++++|++++|||||+|+||+++|++..
T Consensus 162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~ 211 (266)
T d1mxha_ 162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM 211 (266)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS
T ss_pred ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC
Confidence 99999999999999999999999999999999999999999999997654
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.96 E-value=3.2e-29 Score=198.06 Aligned_cols=168 Identities=24% Similarity=0.364 Sum_probs=129.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+||||||++|||+++|++|+++|++|++++|++++ ...|+++.+..+....+...+..+.+|
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 799999999999999999999999999999987643 247999999998888777776656899
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc-------------------
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL------------------- 158 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~------------------- 158 (218)
++++|||..... +.|.....+|..+...+.+...+.+.+.....+.++++....
T Consensus 65 ~lv~~Ag~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 137 (257)
T d1fjha_ 65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred EEEEcCCCCCcH-------HHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence 999999964321 236777889999999999999998887765566665543221
Q ss_pred --------Cc-CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHH
Q 027816 159 --------SH-VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVM 209 (218)
Q Consensus 159 --------~~-~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~ 209 (218)
.+ .++..+|+++|+|+++|+|+++.||+++|||||+|+||+++|||.+...
T Consensus 138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 197 (257)
T d1fjha_ 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL 197 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------
T ss_pred EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc
Confidence 11 1233569999999999999999999999999999999999999988654
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=3.9e-21 Score=158.17 Aligned_cols=172 Identities=16% Similarity=0.048 Sum_probs=126.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-----HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
|+||||||+|.||++++++|+++|++|++++|.... .+....+.......+..+++|++|.+++++.++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence 899999999999999999999999999999985432 22222222233557889999999999999998865
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cC
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HV 161 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~ 161 (218)
.+|+|+|+|+..... .+.++..+.+++|+.|+.++++++...- ..+..++|++||...+. +.
T Consensus 78 --~~d~v~h~aa~~~~~----~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~ 150 (357)
T d1db3a_ 78 --QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPF 150 (357)
T ss_dssp --CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred --CCCEEEEeecccccc----hhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence 689999999975432 2334567789999999999999884321 12234799999854321 12
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.+..+|+.+|.+.+.+++.+++.+ ++++..+.|+.+-.|
T Consensus 151 ~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp 189 (357)
T d1db3a_ 151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESP 189 (357)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECT
T ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCC
Confidence 345789999999999999999884 788999998766555
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.83 E-value=4.1e-22 Score=150.49 Aligned_cols=155 Identities=15% Similarity=0.121 Sum_probs=113.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..+++||+++||||+||||++++++|+++|++|++++|+.++.++..+.+... ..+....+|+++.+++++++
T Consensus 18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~------ 90 (191)
T d1luaa1 18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV------ 90 (191)
T ss_dssp TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT------
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh------
Confidence 45889999999999999999999999999999999999999988887777543 23445779999999887654
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-CCCCchhhhh
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-VGSGSIYGAT 170 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-~~~~~~Y~~s 170 (218)
+++|+||||||.. +...+.++|++.+++|+.+.++....+.+.+.... .....+++...... ..+...|+++
T Consensus 91 --~~iDilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~s 163 (191)
T d1luaa1 91 --KGAHFVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKLH 163 (191)
T ss_dssp --TTCSEEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHHH
T ss_pred --cCcCeeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHHH
Confidence 4689999999863 45678999999999999888776554433222211 12222222111111 1123569999
Q ss_pred HHHHHHHHHH
Q 027816 171 KAAMNQLTRN 180 (218)
Q Consensus 171 K~a~~~~~~~ 180 (218)
|.++..++++
T Consensus 164 k~a~~~l~~s 173 (191)
T d1luaa1 164 RACIAKLFES 173 (191)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHHHHHhc
Confidence 9999887643
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=1.5e-19 Score=147.32 Aligned_cols=168 Identities=18% Similarity=0.168 Sum_probs=126.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh---HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE---LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++||||||+|.||++++++|+++|++|++++|.... .....+... ...+..+++|++|.+.+.++++..
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~------ 72 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDH------ 72 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHT------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhcc------
Confidence 469999999999999999999999999998763222 222222222 235788899999999988887753
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc------------CC
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH------------VG 162 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~------------~~ 162 (218)
.+|+|||.|+... ...+.++..+.+++|+.|+.++++++. +.+..++|++||...+.. ..
T Consensus 73 ~~d~ViHlAa~~~----~~~~~~~~~~~~~~Nv~gt~nlL~~~~----~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~ 144 (338)
T d1udca_ 73 AIDTVIHFAGLKA----VGESVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVYGDQPKIPYVESFPTGT 144 (338)
T ss_dssp TCSEEEECCSCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred CCCEEEECCCccc----hhhHHhCHHHHHHhHHHHHHHHHHHHH----HhCCCEEEecCcceEEccccccccccccccCC
Confidence 5899999999532 122344567889999999999999884 445568999988654422 13
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+..+|+.+|.+.+.+.+....+. .++++..++|+.+-.+
T Consensus 145 p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 183 (338)
T d1udca_ 145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA 183 (338)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEec
Confidence 46789999999999998887773 5788888888776654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.81 E-value=5.5e-19 Score=146.67 Aligned_cols=174 Identities=13% Similarity=0.058 Sum_probs=125.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh----------------hHHHHHHHhh-hCCCeEEEEEeeCCCHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV----------------ELNKCLKEWQ-SKGFVVSGSVCDAASPD 79 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~----------------~~~~~~~~~~-~~~~~v~~~~~D~~~~~ 79 (218)
||+||||||+|.||.+++++|++.|++|++++.-.. ........+. ..+..+..+.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 789999999999999999999999999998863111 1111111111 12346888899999999
Q ss_pred HHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC
Q 027816 80 QREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS 159 (218)
Q Consensus 80 ~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~ 159 (218)
.++++++.. ++|+|+|.|+..... ....+.+.....+++|+.|+.++++++.. .....++++.||.....
T Consensus 81 ~l~~~~~~~------~~d~ViHlAa~~~~~-~s~~~~~~~~~~~~~Nv~gt~nll~~~~~---~~~~~~~i~~ss~~~~~ 150 (393)
T d1i24a_ 81 FLAESFKSF------EPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKE---FGEECHLVKLGTMGEYG 150 (393)
T ss_dssp HHHHHHHHH------CCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHH---HCTTCEEEEECCGGGGC
T ss_pred HHHHHHHhh------cchheeccccccccc-cccccccccccccccccccccHHHHHHHH---hccccceeecccccccc
Confidence 999998865 689999999864321 22345667788899999999999998842 12223566666643321
Q ss_pred ------------------------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 160 ------------------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 160 ------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+..+..+|+.+|.+.+.+++.+.++ .++++..+.|+.+--|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~~~v~G~ 215 (393)
T d1i24a_ 151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGV 215 (393)
T ss_dssp CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECS
T ss_pred ccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeecccccccCC
Confidence 1123357999999999999998887 4789999998766654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.80 E-value=9e-19 Score=143.13 Aligned_cols=166 Identities=22% Similarity=0.203 Sum_probs=122.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HH--HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LN--KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
|+||||||+|.||++++++|+++|++|+++++.... .. ...... ....+..+.+|++|.+++++++...
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~------ 73 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEY------ 73 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHS------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhcc------
Confidence 789999999999999999999999999998653221 11 111222 2345778899999999998887743
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC---------------
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--------------- 159 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--------------- 159 (218)
.+|+|+|+|+.... ....+.....+.+|+.++.++++++ ++.+..++|++||...+.
T Consensus 74 ~~d~VihlAa~~~~----~~~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~ 145 (347)
T d1z45a2 74 KIDSVIHFAGLKAV----GESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC 145 (347)
T ss_dssp CCCEEEECCSCCCH----HHHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTS
T ss_pred CCCEEEEccccccc----cccccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCcccccc
Confidence 58999999996321 1233445678889999999999998 444556899999954432
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccc
Q 027816 160 HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYT 200 (218)
Q Consensus 160 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v 200 (218)
+..+..+|+.+|.+.+.+++.+.+.. ..++++..+.|+.+
T Consensus 146 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v 185 (347)
T d1z45a2 146 PLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNP 185 (347)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEE
T ss_pred CCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecce
Confidence 12245679999999999999888764 34677777776544
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.77 E-value=5.3e-18 Score=138.33 Aligned_cols=168 Identities=21% Similarity=0.228 Sum_probs=124.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh--hCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ--SKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+||+||||||+|.||++++++|+++|++|+++.|+.++......... ........+..|+++.+++.+++.
T Consensus 10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------- 82 (342)
T d1y1pa1 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------- 82 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence 48999999999999999999999999999999998876554433222 223445556789999887665543
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccCcC-----------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLSHV----------- 161 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~----------- 161 (218)
..|.++|+++... ...+ ..+.+..|+.|+.++++.+ .+. ...++|++||..+....
T Consensus 83 -~~~~v~~~a~~~~----~~~~---~~~~~~~nv~gt~~ll~~~----~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e 150 (342)
T d1y1pa1 83 -GAAGVAHIASVVS----FSNK---YDEVVTPAIGGTLNALRAA----AATPSVKRFVLTSSTVSALIPKPNVEGIYLDE 150 (342)
T ss_dssp -TCSEEEECCCCCS----CCSC---HHHHHHHHHHHHHHHHHHH----HTCTTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred -cchhhhhhccccc----cccc---ccccccchhhhHHHHHHhh----hcccccccccccccceeeccCCCCCCCccccc
Confidence 4699999988632 1223 3455778999999999987 333 45689999986533210
Q ss_pred --------------------CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 162 --------------------GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 162 --------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
....+|+.+|.+.+.+++.+.++.. .++++.+|+|+.+--|
T Consensus 151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp 211 (342)
T d1y1pa1 151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGT 211 (342)
T ss_dssp TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECC
T ss_pred cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCC
Confidence 1124699999999999999988864 4688888988876544
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.76 E-value=1.5e-18 Score=142.75 Aligned_cols=173 Identities=17% Similarity=0.139 Sum_probs=125.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeE-EEecCChhhH-HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVV-HTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V-~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++||||||+|.||++++++|+++|++| +++++..... .+..+.+ .....+..+.+|++|.+.++++++.. .
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~------~ 73 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY------Q 73 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH------C
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC------C
Confidence 468999999999999999999999964 4454422111 0111111 12346888999999999998888754 6
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-----CCCeEEEEecCCccCc----------
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-----GVGSIVFISSVGGLSH---------- 160 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-----~~~~iv~~ss~~~~~~---------- 160 (218)
+|+|+|+|+... ...+.++..+.+++|+.|+.++++.+....... +..++|++||...+..
T Consensus 74 ~d~VihlAa~~~----~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 149 (361)
T d1kewa_ 74 PDAVMHLAAESH----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp CSEEEECCSCCC----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CCEEEECccccc----hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence 899999998532 122345567789999999999999987654321 2358999999654321
Q ss_pred -----------CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 161 -----------VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 161 -----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
..+..+|+.+|.+.+.+++.++..+ |+++.+++|+.+-.|.
T Consensus 150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~ 201 (361)
T d1kewa_ 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPY 201 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTT
T ss_pred cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcC
Confidence 1234669999999999999998874 7889999988766553
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=6.7e-18 Score=137.51 Aligned_cols=172 Identities=19% Similarity=0.032 Sum_probs=121.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-----HHHHHHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-----LNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
|++|||||+|.||++++++|+++|++|+.++|..+. .+....... .....+..+.+|++|.+.+.+++...
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 78 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence 344999999999999999999999999999985432 111111111 11246888999999999999888765
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------c
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------H 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~ 160 (218)
.++.++|.++... ...+.++....+++|+.|+.+++.++..+-. .+..++|++||.+.+. +
T Consensus 79 ---~~~~v~~~~a~~~----~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~~~ 150 (347)
T d1t2aa_ 79 ---KPTEIYNLGAQSH----VKISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETTP 150 (347)
T ss_dssp ---CCSEEEECCSCCC----HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred ---ccceeeeeeeccc----cchhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCCCC
Confidence 5688888887532 2234455667789999999999988743321 1224799998864321 1
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..+..+|+.||.+.|.+++.+.+. .++++..+.|+.+-.|
T Consensus 151 ~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~~~vyGp 190 (347)
T d1t2aa_ 151 FYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESP 190 (347)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCC
Confidence 234578999999999999998887 4788888888554443
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=1.1e-17 Score=134.51 Aligned_cols=151 Identities=11% Similarity=0.095 Sum_probs=116.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
.|+||||||+|.||++|+++|+++|+.|+++++.. .+|+.+.+.+.+++..- .+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~------~~ 55 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------RI 55 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------CC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhhc------CC
Confidence 36899999999999999999999999888776432 16899999988877632 57
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC---------------
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--------------- 161 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--------------- 161 (218)
|.++|+|+..... ..+..+..+.+++|+.++.++++++ .+.+..++|++||.+.+.+.
T Consensus 56 d~v~~~a~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~ 128 (315)
T d1e6ua_ 56 DQVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL 128 (315)
T ss_dssp SEEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred CEEEEcchhcccc---ccchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence 9999998753211 1223445667889999999999988 45555689999997654321
Q ss_pred -CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 162 -GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 162 -~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+...+|+.+|.+.|.+++.+.++. |+++..+.|+.+--|
T Consensus 129 ~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp 168 (315)
T d1e6ua_ 129 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGP 168 (315)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEST
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECC
Confidence 112469999999999999998884 899999999877654
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.75 E-value=6.5e-18 Score=136.17 Aligned_cols=168 Identities=16% Similarity=0.025 Sum_probs=120.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH-HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
|+||||||+|.||++++++|+++|++|+.++|..+... ...+.+. ....+..+.+|++|.+.+.+.+... ..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~ 73 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------QP 73 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc------cc
Confidence 78999999999999999999999999999988654311 2222222 2245888999999999988877765 46
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEecCCccC-----------cCCCC
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISSVGGLS-----------HVGSG 164 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss~~~~~-----------~~~~~ 164 (218)
++++++|+..... ...++..+.++.|+.|+.+++.++. +.+. .++++.|+..-.. +....
T Consensus 74 ~~~~~~a~~~~~~----~~~~~~~~~~~~n~~g~~~~l~~~~----~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~ 145 (321)
T d1rpna_ 74 QEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIR----QFSPETRFYQASTSEMFGLIQAERQDENTPFYPR 145 (321)
T ss_dssp SEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHH----HHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred ccccccccccccc----ccccchHHHHhhhhhchHHHHHHHH----HhCCCcccccccchhhcCcccCCCCCCCCCcccc
Confidence 7888887753221 1122356778999999999999873 3333 3566666543211 12355
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.+|+.+|.+.+.+++.++.++ ++++..+.|+-+-.|
T Consensus 146 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp 181 (321)
T d1rpna_ 146 SPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESP 181 (321)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECT
T ss_pred ChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCC
Confidence 889999999999999998884 688888887654443
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.75 E-value=1.3e-17 Score=135.27 Aligned_cols=173 Identities=18% Similarity=0.073 Sum_probs=125.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh-----hHHHHHHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV-----ELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
|++|||||+|.||++++++|+++|++|+.++|... .......... .....+..+.+|+++.+.+++.++..
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--- 78 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 78 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence 79999999999999999999999999999998532 1111111111 12345788899999999998888754
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEecCCccC----------c
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISSVGGLS----------H 160 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~----------~ 160 (218)
.+|+|+|+|+... ...+.++....++.|+.+...++.++....... ...+++..||..... +
T Consensus 79 ---~~D~Vih~Aa~~~----~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~ 151 (339)
T d1n7ha_ 79 ---KPDEVYNLAAQSH----VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 151 (339)
T ss_dssp ---CCSEEEECCSCCC----HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred ---ccchhhhcccccc----ccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence 6899999999632 122345667889999999999998886544433 233455555543221 2
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 161 VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 161 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..+...|+.+|.+.+.+++.+++. .++++..+.|+.|-.|
T Consensus 152 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp 191 (339)
T d1n7ha_ 152 FHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESP 191 (339)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECT
T ss_pred CCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCC
Confidence 334678999999999999999887 4799999999766554
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.74 E-value=1.9e-17 Score=134.79 Aligned_cols=169 Identities=14% Similarity=0.059 Sum_probs=124.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh----hHHHHHHHhh-hCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV----ELNKCLKEWQ-SKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~~~-~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
..|++|||||+|.||++++++|.++|++|++++|... .......... .....+..+..|..|........
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----- 89 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC----- 89 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-----
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-----
Confidence 4589999999999999999999999999999876222 2222211111 12345788899999888754332
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc----------
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------- 160 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---------- 160 (218)
...+.++|.++... ...+.+++...+++|+.|+.++++++ .+.+..++|++||...+..
T Consensus 90 ---~~~~~v~~~~a~~~----~~~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~ 158 (341)
T d1sb8a_ 90 ---AGVDYVLHQAALGS----VPRSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVEDT 158 (341)
T ss_dssp ---TTCSEEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTTC
T ss_pred ---cccccccccccccc----ccccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccCCC
Confidence 24688888877532 12245667889999999999999988 5555669999999754421
Q ss_pred -CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 161 -VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 161 -~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..+...|+.+|.+.+.+++.+++.. ++++..+.|+.+-.+
T Consensus 159 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~ 199 (341)
T d1sb8a_ 159 IGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGR 199 (341)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECT
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeecc
Confidence 2345889999999999999998874 688888888766543
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.74 E-value=4e-17 Score=131.89 Aligned_cols=153 Identities=17% Similarity=0.092 Sum_probs=111.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh-HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
+||||||+|.||++++++|+++|++|+++++-... .......+ .....+..+.+|+++.+++.++++.. ++|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~-~~~~~~~~i~~Di~~~~~l~~~~~~~------~~d 74 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWL-SSLGNFEFVHGDIRNKNDVTRLITKY------MPD 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHh-hccCCcEEEEcccCCHHHHHHHHHhc------CCc
Confidence 58999999999999999999999999988642211 11222222 23356788999999999999888865 589
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------------
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------------- 160 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------------- 160 (218)
+|||+|+.... ....++..+.+++|+.|+.++++++ .+.+..++++.||.....+
T Consensus 75 ~Vih~aa~~~~----~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~ 146 (338)
T d1orra_ 75 SCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV 146 (338)
T ss_dssp EEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred eEEeecccccc----cccccChHHHHHHHHHHHHHHHHhh----hccccccccccccccccccccccccccccccccccc
Confidence 99999986322 1233456788999999999999987 4444455666655433222
Q ss_pred -----------CCCCchhhhhHHHHHHHHHHHHHHhc
Q 027816 161 -----------VGSGSIYGATKAAMNQLTRNLACEWA 186 (218)
Q Consensus 161 -----------~~~~~~Y~~sK~a~~~~~~~l~~e~~ 186 (218)
......|+.+|...+.+.....+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~ 183 (338)
T d1orra_ 147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG 183 (338)
T ss_dssp TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence 12347799999999999999888863
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.73 E-value=3.8e-17 Score=133.35 Aligned_cols=173 Identities=18% Similarity=0.146 Sum_probs=127.5
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++||+||||||+|.||++++++|+++|++|.+++|+........+... ....+..+.+|++|.+.+.++++..
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~------ 78 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------ 78 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhhc------
Confidence 479999999999999999999999999999999998765444333322 2235888999999999988877755
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC------------cCC
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS------------HVG 162 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~------------~~~ 162 (218)
.+|+++|.|+.. ....+.+.....+.+|+.++.++++++.. ......+++.|+..... +..
T Consensus 79 ~~~~v~~~aa~~----~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 151 (356)
T d1rkxa_ 79 QPEIVFHMAAQP----LVRLSYSEPVETYSTNVMGTVYLLEAIRH---VGGVKAVVNITSDKCYDNKEWIWGYRENEAMG 151 (356)
T ss_dssp CCSEEEECCSCC----CHHHHHHCHHHHHHHHTHHHHHHHHHHHH---HCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred hhhhhhhhhccc----cccccccCCccccccccccchhhhhhhhc---cccccccccccccccccccccccccccccccC
Confidence 679999999853 22234556778899999999999998842 12223444444432221 123
Q ss_pred CCchhhhhHHHHHHHHHHHHHHhc------cCCeEEEEeeccccc
Q 027816 163 SGSIYGATKAAMNQLTRNLACEWA------KDNIRTNSVAPWYTK 201 (218)
Q Consensus 163 ~~~~Y~~sK~a~~~~~~~l~~e~~------~~gv~v~~v~PG~v~ 201 (218)
+..+|+.+|...+...+.++.++. ..++.+..+.|+-+-
T Consensus 152 p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vy 196 (356)
T d1rkxa_ 152 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVI 196 (356)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEE
T ss_pred CCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCee
Confidence 457899999999999999888753 236788888886543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=4.5e-17 Score=132.70 Aligned_cols=167 Identities=22% Similarity=0.233 Sum_probs=122.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCC------hh---hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRN------EV---ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~------~~---~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
|+||||||+|.||++++++|+++|++|+.+++. .. ......+.+. ...+..+.+|++|.+.+++.+..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~- 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKK- 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH-
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeeccccccccccccc-
Confidence 688999999999999999999999999888531 11 1112222222 34578889999999998887764
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc--------
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-------- 160 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-------- 160 (218)
..+++++|.|+.... ..+.++..+.+++|+.++.++++++ .+.+..+++++||......
T Consensus 80 -----~~~~~i~h~Aa~~~~----~~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~ 146 (346)
T d1ek6a_ 80 -----YSFMAVIHFAGLKAV----GESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDE 146 (346)
T ss_dssp -----CCEEEEEECCSCCCH----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred -----cccccccccccccCc----HhhHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeeccccccccc
Confidence 368899999996421 2344556788999999999999887 5555668898887543321
Q ss_pred ----CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccC
Q 027816 161 ----VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 161 ----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t 202 (218)
.....+|+.+|...+...+.+++. ..+++...+.|+.+-.
T Consensus 147 ~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G 190 (346)
T d1ek6a_ 147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTG 190 (346)
T ss_dssp TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEEC
T ss_pred cccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceec
Confidence 224468999999999998887765 3578888887765543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.72 E-value=4.5e-17 Score=133.55 Aligned_cols=165 Identities=14% Similarity=0.125 Sum_probs=123.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++++||||||+|.||++++++|+++|++|+++++...... ...........+|+.+.+.+.+.++ .
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~--------~ 79 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVTE--------G 79 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHHT--------T
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHhh--------c
Confidence 6789999999999999999999999999999876543210 1111234567789988887655443 4
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc---------------
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH--------------- 160 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~--------------- 160 (218)
+|.|+|.|+...... .+.+.....+..|+.++.+++.++ ++.+..++|++||...+..
T Consensus 80 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e 152 (363)
T d2c5aa1 80 VDHVFNLAADMGGMG---FIQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLKESD 152 (363)
T ss_dssp CSEEEECCCCCCCHH---HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred CCeEeeccccccccc---ccccccccccccccchhhHHHHhH----HhhCcccccccccccccccccccccccccccccc
Confidence 699999998643211 112345677889999999999987 5556678999999655431
Q ss_pred ---CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 161 ---VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 161 ---~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
..+..+|+.+|.+.+.+++.+.+++ |+++..+.|+.+-.+.
T Consensus 153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~ 196 (363)
T d2c5aa1 153 AWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF 196 (363)
T ss_dssp GSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence 1234679999999999999998884 8999999998776653
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.71 E-value=2.5e-16 Score=130.07 Aligned_cols=171 Identities=19% Similarity=0.157 Sum_probs=124.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHh-CCCeEEEecC---------ChhhHHHHHHHhhh--------CCCeEEEEEeeCCCH
Q 027816 17 GMTALVTGGTRGIGQATVEELAG-LGAVVHTCSR---------NEVELNKCLKEWQS--------KGFVVSGSVCDAASP 78 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~-~G~~V~~~~r---------~~~~~~~~~~~~~~--------~~~~v~~~~~D~~~~ 78 (218)
+++||||||+|.||++++++|++ .|++|+++++ ..+..+.....+.. ....+..+.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 56899999999999999999996 6899998863 11122222222221 123577789999999
Q ss_pred HHHHHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCcc
Q 027816 79 DQREKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGL 158 (218)
Q Consensus 79 ~~~~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~ 158 (218)
+.++++++.. .++|+|+|.|+.... ....+.....+++|+.++.++++++ ++.+..+++++++....
T Consensus 82 ~~l~~~~~~~-----~~~d~ViH~Aa~~~~----~~~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~ 148 (383)
T d1gy8a_ 82 DFLNGVFTRH-----GPIDAVVHMCAFLAV----GESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIF 148 (383)
T ss_dssp HHHHHHHHHS-----CCCCEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGT
T ss_pred HHhhhhhhcc-----ceeehhhcccccccc----cccccccccccccccccccccchhh----hccCCcccccccccccc
Confidence 9988888765 568999999996332 1233445678899999999999988 45555677777665433
Q ss_pred C------------------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 159 S------------------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 159 ~------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
. ...+..+|+.+|.+.+.+++.+... +|+++.++.|+.+--|
T Consensus 149 ~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~ 208 (383)
T d1gy8a_ 149 GNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGA 208 (383)
T ss_dssp BSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECC
T ss_pred cccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeecc
Confidence 2 1224588999999999999999887 4799999998776543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=1.6e-17 Score=133.87 Aligned_cols=161 Identities=13% Similarity=0.101 Sum_probs=111.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|+||||||+|.||++++++|+++|++|+++++............ .....+.....|+.+ . .+ ..+|
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~-----~-------~~-~~~d 67 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVE-----P-------LY-IEVD 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTS-----C-------CC-CCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHH-----H-------HH-cCCC
Confidence 78999999999999999999999999999876332211111111 112233333333321 1 12 3689
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc----------------C
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH----------------V 161 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~----------------~ 161 (218)
+|+|+|+...... +.++..+.+++|+.++.++++++. +.+ .++|++||.+.+.. .
T Consensus 68 ~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~~----~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~ 138 (312)
T d2b69a1 68 QIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLAK----RVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI 138 (312)
T ss_dssp EEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHHH----HHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred EEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence 9999998643211 122456778999999999999873 333 37999998543321 1
Q ss_pred CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 162 GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 162 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
.+..+|+.+|.+.+.+++.+++++ |+++..++|+.+-.|.
T Consensus 139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~ 178 (312)
T d2b69a1 139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPR 178 (312)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCC
Confidence 245779999999999999999884 7999999998886543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=8.8e-16 Score=116.31 Aligned_cols=151 Identities=17% Similarity=0.106 Sum_probs=106.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
|..|+|+||||+|+||++++++|+++|++|.++.|+.+++... ....+..+.+|++|.+++.++++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------- 66 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------- 66 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT--------
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc--------
Confidence 3467899999999999999999999999999999998774321 22457788999999999877765
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCC----chhhhh
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSG----SIYGAT 170 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~----~~Y~~s 170 (218)
..|+||+++|........ +++..++.++++++ ++.+..++|++||.......+.. ..|...
T Consensus 67 ~~d~vi~~~g~~~~~~~~-----------~~~~~~~~~l~~aa----~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~ 131 (205)
T d1hdoa_ 67 GQDAVIVLLGTRNDLSPT-----------TVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDD 131 (205)
T ss_dssp TCSEEEECCCCTTCCSCC-----------CHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred CCCEEEEEeccCCchhhh-----------hhhHHHHHHHHHHH----HhcCCCeEEEEeeeeccCCCccccccccccchH
Confidence 359999999864322111 13344555555544 66666799999986554433222 345555
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeeccccc
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTK 201 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~ 201 (218)
|...+.+. ...|++...|.||.+.
T Consensus 132 ~~~~e~~l-------~~~~~~~tiirp~~~~ 155 (205)
T d1hdoa_ 132 HIRMHKVL-------RESGLKYVAVMPPHIG 155 (205)
T ss_dssp HHHHHHHH-------HHTCSEEEEECCSEEE
T ss_pred HHHHHHHH-------HhcCCceEEEecceec
Confidence 55555432 2368999999999774
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=1.5e-16 Score=129.29 Aligned_cols=162 Identities=13% Similarity=0.082 Sum_probs=118.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
++||||||+|.||++++++|+++| ++|+++++......... ....+..+++|+++.+++.+.+. ..+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~ 68 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKC 68 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCC
Confidence 368999999999999999999999 58998887655433221 23468899999998877655332 146
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC---------------
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV--------------- 161 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--------------- 161 (218)
|+|+|+|+.... ....++..+.+++|+.|+.++++++ .+.+ .++++.||...+...
T Consensus 69 d~Vih~a~~~~~----~~~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~ 139 (342)
T d2blla1 69 DVVLPLVAIATP----IEYTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVG 139 (342)
T ss_dssp SEEEECBCCCCH----HHHHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred Cccccccccccc----cccccCCcccccccccccccccccc----cccc-cccccccccccccccccccccccccccccc
Confidence 999999996432 1233445678999999999999987 4443 356666664432211
Q ss_pred ---CCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 162 ---GSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 162 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
.+...|+.+|.+.+.+++.+++.+ |+++..+.|..+-.+
T Consensus 140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~ 181 (342)
T d2blla1 140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGP 181 (342)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECS
T ss_pred ccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccc
Confidence 123679999999999999999884 788888877766654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.67 E-value=2.5e-16 Score=127.09 Aligned_cols=166 Identities=19% Similarity=0.131 Sum_probs=119.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeE------EEecCChhhH-HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVV------HTCSRNEVEL-NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V------~~~~r~~~~~-~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
++||||||+|.||++++++|+++|+.| +..++..... ....... .....+..+..|.++.+......
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~----- 74 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLAREL----- 74 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHT-----
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhccc-----
Confidence 468999999999999999999999744 3333211110 0001111 23456888999999988765432
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc----------
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH---------- 160 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~---------- 160 (218)
..+|.|+|.|+... .....++..+.+++|+.++.++++++ .+.+..++|++||.+.+..
T Consensus 75 ---~~~d~vi~~a~~~~----~~~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~ 143 (322)
T d1r6da_ 75 ---RGVDAIVHFAAESH----VDRSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWTESS 143 (322)
T ss_dssp ---TTCCEEEECCSCCC----HHHHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred ---cccceEEeeccccc----ccccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCCCCC
Confidence 35799999998632 22334455678899999999999988 4455568999999765432
Q ss_pred -CCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 161 -VGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 161 -~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..+..+|+.+|.+.+.+++.+++++ |+++..+.|+.+-.|
T Consensus 144 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp 184 (322)
T d1r6da_ 144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGP 184 (322)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECc
Confidence 2344789999999999999999884 799999998877654
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.67 E-value=8.6e-17 Score=131.13 Aligned_cols=165 Identities=20% Similarity=0.138 Sum_probs=115.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeE--EEecCChhh-HHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVV--HTCSRNEVE-LNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V--~~~~r~~~~-~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.|.||||||+|.||++++++|+++|++| +..++.... ....... -....+..+.+|++|.+.+.+++.
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~------- 72 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLAA------- 72 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHHT-------
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHHh-------
Confidence 4789999999999999999999999854 444321111 0000011 123468889999999999877654
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC--------------
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-------------- 159 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-------------- 159 (218)
..|.++|.|+.... ....++..+.+++|+.|+.+++..+. +.+ .++|++||...+.
T Consensus 73 -~~~~v~~~a~~~~~----~~~~~~~~~~~~~N~~g~~nll~~~~----~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~ 142 (346)
T d1oc2a_ 73 -KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAAR----KYD-IRFHHVSTDEVYGDLPLREDLPGHGEG 142 (346)
T ss_dssp -TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHH----HHT-CEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred -hhhhhhhhhhcccc----cchhhCcccceeeehHhHHhhhhhhc----ccc-ccccccccceEecccCccccccccccC
Confidence 34778888875322 12234456788999999999998773 333 3677776654331
Q ss_pred ---------cCCCCchhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 160 ---------HVGSGSIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 160 ---------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
+..+...|+.+|.+.+.+++.++++ .|+++.++.|+.+-.|
T Consensus 143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~vyGp 192 (346)
T d1oc2a_ 143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNCSNNYGP 192 (346)
T ss_dssp TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEEST
T ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeecceeCC
Confidence 1123467999999999999999888 4899999999877554
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=1.3e-15 Score=117.65 Aligned_cols=159 Identities=15% Similarity=0.179 Sum_probs=115.3
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
++.|++|+||||||+|.||++++++|+++|. +|.+++|++..... .....+....+|..+.+++.+.+
T Consensus 9 ~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~~---- 78 (232)
T d2bkaa1 9 DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASAF---- 78 (232)
T ss_dssp HHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGGG----
T ss_pred HhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccccc----
Confidence 4567889999999999999999999999996 79999987643221 11234666667877665543322
Q ss_pred hhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhh
Q 027816 90 SKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGA 169 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~ 169 (218)
...|+++|++|.. .......+..++|+.++..+++.+ .+.+..++|++|+...... ....|+.
T Consensus 79 ----~~~d~vi~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~--~~~~Y~~ 141 (232)
T d2bkaa1 79 ----QGHDVGFCCLGTT-------RGKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQ 141 (232)
T ss_dssp ----SSCSEEEECCCCC-------HHHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHH
T ss_pred ----ccccccccccccc-------ccccchhhhhhhcccccceeeecc----cccCccccccCCccccccC--ccchhHH
Confidence 2479999999842 123445667889999999999887 5566678999998765443 3477999
Q ss_pred hHHHHHHHHHHHHHHhccCCe-EEEEeecccccChh
Q 027816 170 TKAAMNQLTRNLACEWAKDNI-RTNSVAPWYTKTSL 204 (218)
Q Consensus 170 sK~a~~~~~~~l~~e~~~~gv-~v~~v~PG~v~t~~ 204 (218)
+|...+...+. .+. ++..++||.+..+.
T Consensus 142 ~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~ 170 (232)
T d2bkaa1 142 VKGEVEAKVEE-------LKFDRYSVFRPGVLLCDR 170 (232)
T ss_dssp HHHHHHHHHHT-------TCCSEEEEEECCEEECTT
T ss_pred HHHHhhhcccc-------ccccceEEecCceeecCC
Confidence 99888865432 244 57889999987764
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.54 E-value=4.4e-14 Score=108.05 Aligned_cols=165 Identities=17% Similarity=0.116 Sum_probs=109.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
++||||||+|+||++++++|+++|+ +|+...|++++.... ...+..+.+|+++.+++.++++ .
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~--------~ 68 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ--------G 68 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT--------T
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-------cCCcEEEEeeeccccccccccc--------c
Confidence 5999999999999999999999996 466677887654322 2346778899999999877664 4
Q ss_pred ccEEEecCCCCCCCC---------CCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCch
Q 027816 96 LNILVNNVGTNIRKP---------TIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSI 166 (218)
Q Consensus 96 id~vv~~ag~~~~~~---------~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~ 166 (218)
+|.|+|+++...... ........+.....+|+.+..+++... .....+...+.++.....+......
T Consensus 69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~~~~~~~~~ 144 (252)
T d2q46a1 69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA----KVAGVKHIVVVGSMGGTNPDHPLNK 144 (252)
T ss_dssp CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHH----HHHTCSEEEEEEETTTTCTTCGGGG
T ss_pred ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccc----ccccccccccccccccCCCCccccc
Confidence 699999997643111 111112234456678888988877766 3334567888887665544333333
Q ss_pred hhhhH-HHHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 167 YGATK-AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 167 Y~~sK-~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
+..++ .......+.+..+ .|+++..++||.+..+.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~ 180 (252)
T d2q46a1 145 LGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKE 180 (252)
T ss_dssp GGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSC
T ss_pred ccccchhhhhhhhhhhhhc---ccccceeecceEEECCC
Confidence 33332 3333333333333 68999999999886654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.43 E-value=5.5e-13 Score=100.93 Aligned_cols=149 Identities=14% Similarity=0.179 Sum_probs=102.4
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|+||||||+|.||++++++|+++|+ +|+...|+... ...++. .+..|..++ .+...+
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~~~---~~~~d~~~~-------~~~~~~ 61 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLD---NPVGPLAEL-------LPQLDG 61 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEE---CCBSCHHHH-------GGGCCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hccccc---ccccchhhh-------hhcccc
Confidence 48999999999999999999999997 67777765422 112232 334444332 222225
Q ss_pred cccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHHHH
Q 027816 95 KLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKAAM 174 (218)
Q Consensus 95 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 174 (218)
.+|.+++++|..... ...-....+.|+.++.++++++ ++.+..+++++||..+.. .....|..+|...
T Consensus 62 ~~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~ 129 (212)
T d2a35a1 62 SIDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADA--KSSIFYNRVKGEL 129 (212)
T ss_dssp CCSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred chheeeeeeeeeccc------cccccccccchhhhhhhccccc----cccccccccccccccccc--ccccchhHHHHHH
Confidence 689999998853211 1112456788999999999887 566667899999876543 3457899999887
Q ss_pred HHHHHHHHHHhccCCe-EEEEeecccccChh
Q 027816 175 NQLTRNLACEWAKDNI-RTNSVAPWYTKTSL 204 (218)
Q Consensus 175 ~~~~~~l~~e~~~~gv-~v~~v~PG~v~t~~ 204 (218)
|...+ + .+. +...++|+.+..+.
T Consensus 130 E~~l~----~---~~~~~~~I~Rp~~v~G~~ 153 (212)
T d2a35a1 130 EQALQ----E---QGWPQLTIARPSLLFGPR 153 (212)
T ss_dssp HHHHT----T---SCCSEEEEEECCSEESTT
T ss_pred hhhcc----c---cccccceeeCCcceeCCc
Confidence 76543 2 244 68889999886554
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.43 E-value=1.1e-12 Score=102.84 Aligned_cols=143 Identities=22% Similarity=0.258 Sum_probs=102.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|.||++++++|.++|++|+.++|+. +|++|.++++++++.. ++|
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~------~~d 54 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK------KPN 54 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc------CCC
Confidence 4599999999999999999999999999998853 5899999998888754 579
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC-----------cCCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS-----------HVGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~-----------~~~~~~~ 166 (218)
+|+|+|+.... +.........+..|+.....+...+.. .. ..+++.||..... +..+...
T Consensus 55 ~vih~a~~~~~----~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~ 125 (281)
T d1vl0a_ 55 VVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-AEIVQISTDYVFDGEAKEPITEFDEVNPQSA 125 (281)
T ss_dssp EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred EEEeecccccc----ccccccchhhccccccccccccccccc----cc-ccccccccceeeeccccccccccccccchhh
Confidence 99999885321 223344466777888888777766532 22 3566666542221 2345577
Q ss_pred hhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 167 YGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 167 Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
|+.+|...+.+.+. .+.+...+.|+.+.-+
T Consensus 126 ~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~ 155 (281)
T d1vl0a_ 126 YGKTKLEGENFVKA-------LNPKYYIVRTAWLYGD 155 (281)
T ss_dssp HHHHHHHHHHHHHH-------HCSSEEEEEECSEESS
T ss_pred hhhhhhHHHHHHHH-------hCCCccccceeEEeCC
Confidence 89888887766532 2567888888887543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.41 E-value=5.6e-13 Score=105.14 Aligned_cols=130 Identities=17% Similarity=0.190 Sum_probs=93.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++||||||+|.||++++++|.++|..|.+..++.+ ...|++|.+.++++++.. ++|
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~------~~D 56 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE------------------FCGDFSNPKGVAETVRKL------RPD 56 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCSS------------------SCCCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCcc------------------ccCcCCCHHHHHHHHHHc------CCC
Confidence 46999999999999999999999865554433321 237999999998888765 589
Q ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCCch
Q 027816 98 ILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSGSI 166 (218)
Q Consensus 98 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~~~ 166 (218)
+|||+||...... +.+.....++.|+.+...++.++ ++. ..+++++||...+.. ..+...
T Consensus 57 ~Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~ 127 (298)
T d1n2sa_ 57 VIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNV 127 (298)
T ss_dssp EEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred EEEEecccccccc----cccCccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCCCch
Confidence 9999999643221 12234567889999999999887 333 356777777543321 224478
Q ss_pred hhhhHHHHHHHHHH
Q 027816 167 YGATKAAMNQLTRN 180 (218)
Q Consensus 167 Y~~sK~a~~~~~~~ 180 (218)
|+.+|.+.+.+.+.
T Consensus 128 y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 128 YGKTKLAGEKALQD 141 (298)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhhHHh
Confidence 99999988876544
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.31 E-value=4.2e-11 Score=94.63 Aligned_cols=155 Identities=14% Similarity=0.120 Sum_probs=96.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhH----HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVEL----NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++||||||+|.||++++++|+++|++|+++.|+.... .+....+. ...+..+.+|+++.+.+.+.+.
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~------- 74 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK------- 74 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhcc-------
Confidence 4699999999999999999999999999998865431 11122222 2347778999999988766554
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcC-CCCchhhhhHH
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHV-GSGSIYGATKA 172 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-~~~~~Y~~sK~ 172 (218)
..+.++++++.... ..|..+...++.++ .+....++++.||....... .....|..++.
T Consensus 75 -~~~~~~~~~~~~~~---------------~~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~ 134 (312)
T d1qyda_ 75 -QVDVVISALAGGVL---------------SHHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITF 134 (312)
T ss_dssp -TCSEEEECCCCSSS---------------STTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred -Ccchhhhhhhhccc---------------ccchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhh
Confidence 34778877764221 12344445555554 44445677777765433211 11122333343
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeecccccChh
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWYTKTSL 204 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~ 204 (218)
......+.+..+ .+++...++||.+-.+.
T Consensus 135 ~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~ 163 (312)
T d1qyda_ 135 IDKRKVRRAIEA---ASIPYTYVSSNMFAGYF 163 (312)
T ss_dssp HHHHHHHHHHHH---TTCCBCEEECCEEHHHH
T ss_pred HHHHHHHHhhcc---cccceEEeccceeecCC
Confidence 333334333333 57888999998875543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.27 E-value=9.2e-11 Score=92.00 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=98.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHH-----HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELN-----KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.|+||||||+|.||++++++|+++|++|++++|+..... .....+.. ..+..+..|+.+.+...+.++
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~----- 75 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK----- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhcc--CCcEEEEeecccchhhhhhhh-----
Confidence 468999999999999999999999999999998654321 12222222 346677899999998776665
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhH
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATK 171 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK 171 (218)
..+.++++++.. +..+...+.+++ .......+++.|+............+...+
T Consensus 76 ---~~~~vi~~~~~~-------------------~~~~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 129 (307)
T d1qyca_ 76 ---NVDVVISTVGSL-------------------QIESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKSV 129 (307)
T ss_dssp ---TCSEEEECCCGG-------------------GSGGGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHHH
T ss_pred ---hceeeeeccccc-------------------ccchhhHHHHHH----HHhccccceeeecccccccccccccccccc
Confidence 347888887642 223333444444 333445677777755444444444444444
Q ss_pred HHHHHHHHHHHHHhccCCeEEEEeecccccChhh
Q 027816 172 AAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLV 205 (218)
Q Consensus 172 ~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~ 205 (218)
.......+....+ .+++...+.|+.+..+..
T Consensus 130 ~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~ 160 (307)
T d1qyca_ 130 FEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFL 160 (307)
T ss_dssp HHHHHHHHHHHHH---HTCCBEEEECCEEHHHHT
T ss_pred ccccccccchhhc---cCCCceecccceecCCCc
Confidence 4444444444444 478889999998866543
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=1.9e-11 Score=96.45 Aligned_cols=157 Identities=15% Similarity=0.204 Sum_probs=97.4
Q ss_pred EEEecCCCchHHHHHHHHHhCCC-eEEEecCChh--hHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh-cCCc
Q 027816 20 ALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEV--ELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK-FNGK 95 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 95 (218)
||||||+|.||++++++|+++|+ +|+++++-.. +..... + ...+|..+.++. .+..... ....
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~----~------~~~~~~~~~~~~---~~~~~~~~~~~~ 68 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----D------LNIADYMDKEDF---LIQIMAGEEFGD 68 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----T------SCCSEEEEHHHH---HHHHHTTCCCSS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc----c------cchhhhccchHH---HHHHhhhhcccc
Confidence 79999999999999999999997 5777753222 111111 1 012333334442 2322221 1135
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCc-----------CCCC
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSH-----------VGSG 164 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~-----------~~~~ 164 (218)
++.++|.|+.... .... .....+.|+.+...++..+. .... ++++.||.....+ .+..
T Consensus 69 ~~~i~~~aa~~~~---~~~~---~~~~~~~~~~~~~~~l~~~~----~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~ 137 (307)
T d1eq2a_ 69 VEAIFHEGACSST---TEWD---GKYMMDNNYQYSKELLHYCL----EREI-PFLYASSAATYGGRTSDFIESREYEKPL 137 (307)
T ss_dssp CCEEEECCSCCCT---TCCC---HHHHHHHTHHHHHHHHHHHH----HHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred hhhhhhhcccccc---cccc---cccccccccccccccccccc----cccc-cccccccccccccccccccccccccccc
Confidence 7888998875321 1222 34456788888888887763 3333 4555555433321 2456
Q ss_pred chhhhhHHHHHHHHHHHHHHhccCCeEEEEeecccccCh
Q 027816 165 SIYGATKAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTS 203 (218)
Q Consensus 165 ~~Y~~sK~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~ 203 (218)
..|+.+|.+.+.+++.+..+ .++++..+.|..+--|
T Consensus 138 ~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp 173 (307)
T d1eq2a_ 138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGP 173 (307)
T ss_dssp SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESS
T ss_pred cccccccchhhhhccccccc---cccccccccceeEeec
Confidence 78999999999999988777 5677777777655443
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.21 E-value=2.9e-10 Score=91.91 Aligned_cols=150 Identities=15% Similarity=0.009 Sum_probs=96.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+.|+|+||||+|.||++++++|+++|++|+++.|+.+.... +.+ .....+..++.|+.|..++ ++.+. ..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~-~~~~~v~~~~gD~~d~~~~---~~~a~----~~ 71 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EEL-QAIPNVTLFQGPLLNNVPL---MDTLF----EG 71 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHH-HTSTTEEEEESCCTTCHHH---HHHHH----TT
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhh-cccCCCEEEEeeCCCcHHH---HHHHh----cC
Confidence 46899999999999999999999999999999998765432 122 1223478889999986553 22221 23
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccC--cCCCCchhhhhHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLS--HVGSGSIYGATKAA 173 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~--~~~~~~~Y~~sK~a 173 (218)
.|.++++.... .. .++....+++.++ .+.+..++++.||..... +.....+|..+|..
T Consensus 72 ~~~~~~~~~~~-----~~-----------~~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~ 131 (350)
T d1xgka_ 72 AHLAFINTTSQ-----AG-----------DEIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFT 131 (350)
T ss_dssp CSEEEECCCST-----TS-----------CHHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHH
T ss_pred CceEEeecccc-----cc-----------hhhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHHH
Confidence 57777664421 11 1233344455554 344455778888765433 33344677788877
Q ss_pred HHHHHHHHHHHhccCCeEEEEeecccccC
Q 027816 174 MNQLTRNLACEWAKDNIRTNSVAPWYTKT 202 (218)
Q Consensus 174 ~~~~~~~l~~e~~~~gv~v~~v~PG~v~t 202 (218)
.+.+.+. .+++...+.||.+..
T Consensus 132 ~~~~~~~-------~~~~~~~vr~~~~~~ 153 (350)
T d1xgka_ 132 VENYVRQ-------LGLPSTFVYAGIYNN 153 (350)
T ss_dssp HHHHHHT-------SSSCEEEEEECEEGG
T ss_pred HHHHHHh-------hccCceeeeeceeec
Confidence 7665432 357778888887644
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.18 E-value=5.4e-16 Score=115.98 Aligned_cols=47 Identities=28% Similarity=0.360 Sum_probs=41.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK 64 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~ 64 (218)
++|.|+||+|+||+++|+.|+++|++|++.+|+++++++..+++...
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~ 47 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI 47 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 35778888899999999999999999999999999998888777543
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.13 E-value=1.8e-05 Score=57.42 Aligned_cols=85 Identities=20% Similarity=0.227 Sum_probs=62.1
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHH---HHhhhCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCL---KEWQSKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~---~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
..++++|+|+|.|+ ||.|++++..|.+.|. ++.+..|+.+..++.. +.+.... .......|..+.+++.+...
T Consensus 13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 89 (182)
T d1vi2a1 13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT-DCVVTVTDLADQQAFAEALA- 89 (182)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH-
T ss_pred CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc-CcceEeeecccccchhhhhc-
Confidence 45678999999998 6899999999999997 7999999877665443 3333222 23345678888877654433
Q ss_pred HHhhcCCcccEEEecCCCC
Q 027816 88 VGSKFNGKLNILVNNVGTN 106 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~ 106 (218)
..|++|++....
T Consensus 90 -------~~diiIN~Tp~G 101 (182)
T d1vi2a1 90 -------SADILTNGTKVG 101 (182)
T ss_dssp -------TCSEEEECSSTT
T ss_pred -------ccceeccccCCc
Confidence 469999997654
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.06 E-value=1.2e-05 Score=57.47 Aligned_cols=63 Identities=14% Similarity=0.059 Sum_probs=48.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~ 84 (218)
+|.|+|.|| |.+|+.+|+.|+++|++|++.+|+.++.+.+.+++ ........+..........
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~ 64 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAE 64 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhh
Confidence 689999987 99999999999999999999999999888766543 2334444555555554443
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.06 E-value=1.6e-05 Score=56.51 Aligned_cols=73 Identities=18% Similarity=0.268 Sum_probs=55.2
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++|+++|.|+ |.+|..+++.|..+|+ ++.++.|+.++.+.+.+++.. .. . ..+++.+.+.
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-----~~--~---~~~~~~~~l~------ 83 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-----EA--V---RFDELVDHLA------ 83 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-----EE--C---CGGGHHHHHH------
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-----cc--c---cchhHHHHhc------
Confidence 578999999998 9999999999999998 799999999888877776531 11 1 2333333332
Q ss_pred CCcccEEEecCCC
Q 027816 93 NGKLNILVNNVGT 105 (218)
Q Consensus 93 ~~~id~vv~~ag~ 105 (218)
..|+||.+.+.
T Consensus 84 --~~Divi~atss 94 (159)
T d1gpja2 84 --RSDVVVSATAA 94 (159)
T ss_dssp --TCSEEEECCSS
T ss_pred --cCCEEEEecCC
Confidence 45999999774
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.03 E-value=1.5e-05 Score=57.69 Aligned_cols=79 Identities=16% Similarity=0.233 Sum_probs=55.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+|||+||+|++|...+.-....|++|+.+++++++.+...+ + +.... .|-.+.+..++..+... +..
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~-~---Ga~~v---i~~~~~~~~~~~~~~~~---~~G 98 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-I---GFDAA---FNYKTVNSLEEALKKAS---PDG 98 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCSEE---EETTSCSCHHHHHHHHC---TTC
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh-h---hhhhh---cccccccHHHHHHHHhh---cCC
Confidence 58899999999999999999999999999999998876544332 2 22222 34444444444433332 236
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 99 vd~v~D~vG 107 (182)
T d1v3va2 99 YDCYFDNVG 107 (182)
T ss_dssp EEEEEESSC
T ss_pred CceeEEecC
Confidence 999999977
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=98.03 E-value=1.5e-05 Score=57.15 Aligned_cols=79 Identities=16% Similarity=0.308 Sum_probs=58.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
..+++||+|+|.|+ ||-+++++..|.+.|.+|.++.|+.++.+...+.+.... .+.....| +. .
T Consensus 13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~~------------~ 76 (170)
T d1nyta1 13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMD--EL------------E 76 (170)
T ss_dssp TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSG--GG------------T
T ss_pred CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccccc--cc------------c
Confidence 35678999999997 788999999999999999999999999888877765443 22222221 11 0
Q ss_pred cCCcccEEEecCCCCC
Q 027816 92 FNGKLNILVNNVGTNI 107 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~ 107 (218)
....|++|++.....
T Consensus 77 -~~~~dliIN~Tp~G~ 91 (170)
T d1nyta1 77 -GHEFDLIINATSSGI 91 (170)
T ss_dssp -TCCCSEEEECCSCGG
T ss_pred -ccccceeecccccCc
Confidence 135799999976543
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.99 E-value=1.1e-05 Score=58.07 Aligned_cols=79 Identities=18% Similarity=0.240 Sum_probs=55.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+|||+||+|++|...+......|++|+.+++++++.+.. +++. ..- ..|.++.+-.+++.+.+. +..
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~G---a~~---vi~~~~~~~~~~i~~~t~---~~g 97 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNG---AHE---VFNHREVNYIDKIKKYVG---EKG 97 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTT---CSE---EEETTSTTHHHHHHHHHC---TTC
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccc-cccC---ccc---ccccccccHHHHhhhhhc---cCC
Confidence 578999999999999999998888999999999887765443 3332 111 246666554444444332 135
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 98 ~d~v~d~~g 106 (174)
T d1yb5a2 98 IDIIIEMLA 106 (174)
T ss_dssp EEEEEESCH
T ss_pred ceEEeeccc
Confidence 899998866
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.98 E-value=2e-05 Score=56.31 Aligned_cols=83 Identities=24% Similarity=0.320 Sum_probs=56.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+|+|+| +|++|...+..+...|++|+++++++++++...+ +. .... +..| ...++.....+.+.+..++.
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~g---a~~~-~~~~-~~~~~~~~~~~~~~~~~g~g 98 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CG---ADVT-LVVD-PAKEEESSIIERIRSAIGDL 98 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TT---CSEE-EECC-TTTSCHHHHHHHHHHHSSSC
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cC---CcEE-Eecc-ccccccchhhhhhhcccccC
Confidence 367899997 5899999998888899999999999988765433 21 1111 1122 22233344455565556567
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.++|.
T Consensus 99 ~D~vid~~g~ 108 (170)
T d1e3ja2 99 PNVTIDCSGN 108 (170)
T ss_dssp CSEEEECSCC
T ss_pred CceeeecCCC
Confidence 8999999884
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.95 E-value=1.6e-05 Score=54.47 Aligned_cols=72 Identities=13% Similarity=0.033 Sum_probs=56.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++|+|.|+ |.+|+.+++.|.++|++|++++++++..+...++. .+..+..|.++.+.++++-- ...|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i-------~~a~ 67 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGI-------EDAD 67 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTT-------TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcCh-------hhhh
Confidence 47899998 99999999999999999999999998877665432 25567899999998665411 2457
Q ss_pred EEEec
Q 027816 98 ILVNN 102 (218)
Q Consensus 98 ~vv~~ 102 (218)
.++..
T Consensus 68 ~vv~~ 72 (132)
T d1lssa_ 68 MYIAV 72 (132)
T ss_dssp EEEEC
T ss_pred hhccc
Confidence 77765
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.85 E-value=2e-05 Score=56.73 Aligned_cols=80 Identities=18% Similarity=0.198 Sum_probs=56.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|++|...+......|++|+.+++++++.+... ++.. .. ..|.++.+-.+++.+.+ + +..
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa---~~---vi~~~~~d~~~~v~~~t-~--g~g 97 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGA---WQ---VINYREEDLVERLKEIT-G--GKK 97 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTC---SE---EEETTTSCHHHHHHHHT-T--TCC
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCC---eE---EEECCCCCHHHHHHHHh-C--CCC
Confidence 4789999999999999999988889999999999998876544 3321 11 24655544333332222 1 246
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.+.|.
T Consensus 98 ~d~v~d~~g~ 107 (179)
T d1qora2 98 VRVVYDSVGR 107 (179)
T ss_dssp EEEEEECSCG
T ss_pred eEEEEeCccH
Confidence 8999998773
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.82 E-value=8.9e-05 Score=51.67 Aligned_cols=111 Identities=10% Similarity=0.083 Sum_probs=64.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhC---CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.++|.|.|+ |.+|..+|..|+.+| .+|++.+++++..+....++.+. .........| .++ +
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~-------~--- 70 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSD-------C--- 70 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGG-------G---
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHH-------h---
Confidence 457888896 999999999999988 48999999998776655555431 1112222333 322 1
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeE-EEEe
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSI-VFIS 153 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~i-v~~s 153 (218)
..-|+++.++|..... +.+ =.+.++.|+. +++...+.+.+..+..+ +++|
T Consensus 71 --~~adivvitag~~~~~---g~~---r~~l~~~N~~----i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 71 --KDADLVVITAGAPQKP---GES---RLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp --TTCSEEEECCCC----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECS
T ss_pred --ccccEEEEecccccCC---CCC---HHHHHHHHHH----HHHHHHHHHhhcCCCcEEEEeC
Confidence 2459999999863211 111 1233445543 44455555555544444 4444
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.77 E-value=2.7e-05 Score=48.18 Aligned_cols=42 Identities=29% Similarity=0.328 Sum_probs=37.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
++++++|+||+||+|...+..+...|++|+.+.+++++.+..
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~ 72 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 578999999999999999988888999999999998876554
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.77 E-value=0.00013 Score=52.17 Aligned_cols=81 Identities=12% Similarity=0.237 Sum_probs=57.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
...+++|.|+|.|+ ||-+++++..|.+.+.+|.++.|+.++.+...+.+.... .+.....|.. .
T Consensus 13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~ 76 (171)
T d1p77a1 13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------P 76 (171)
T ss_dssp TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------C
T ss_pred CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------c
Confidence 35678999999986 677999999999988899999999999888887775432 3444443311 1
Q ss_pred cCCcccEEEecCCCCCCC
Q 027816 92 FNGKLNILVNNVGTNIRK 109 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~ 109 (218)
. ...|++|++.......
T Consensus 77 ~-~~~diiIN~tp~g~~~ 93 (171)
T d1p77a1 77 L-QTYDLVINATSAGLSG 93 (171)
T ss_dssp C-SCCSEEEECCCC----
T ss_pred c-cccceeeecccccccc
Confidence 1 4679999998765433
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.74 E-value=2.9e-05 Score=55.98 Aligned_cols=78 Identities=21% Similarity=0.269 Sum_probs=53.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC-C
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN-G 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~-~ 94 (218)
.|.+|||+||+|++|...+..+...|++|+++.+++++.+.+ ++ .+.... .|..+.+-.+ ++.+..+ .
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l-~~---~Ga~~v---i~~~~~~~~~----~v~~~t~~~ 93 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SR---LGVEYV---GDSRSVDFAD----EILELTDGY 93 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HT---TCCSEE---EETTCSTHHH----HHHHHTTTC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc-cc---cccccc---ccCCccCHHH----HHHHHhCCC
Confidence 478999999999999999998888999999999888765433 22 222221 3444443323 3333322 3
Q ss_pred cccEEEecCC
Q 027816 95 KLNILVNNVG 104 (218)
Q Consensus 95 ~id~vv~~ag 104 (218)
.+|+++.+.|
T Consensus 94 g~d~v~d~~g 103 (183)
T d1pqwa_ 94 GVDVVLNSLA 103 (183)
T ss_dssp CEEEEEECCC
T ss_pred CEEEEEeccc
Confidence 6899999887
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.74 E-value=4.1e-05 Score=54.72 Aligned_cols=81 Identities=22% Similarity=0.253 Sum_probs=55.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|.|+ |++|...+..+...|+ +|+++++++++++... ++.. . ..+..+-.+..+..+ .+...++.
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga---~-~~~~~~~~~~~~~~~---~~~~~~g~ 96 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGA---D-LVLQISKESPQEIAR---KVEGQLGC 96 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTC---S-EEEECSSCCHHHHHH---HHHHHHTS
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCC---c-ccccccccccccccc---cccccCCC
Confidence 3668999987 9999999999989998 7999999998876543 3321 1 122233344444433 33333445
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.+.|.
T Consensus 97 g~Dvvid~~G~ 107 (171)
T d1pl8a2 97 KPEVTIECTGA 107 (171)
T ss_dssp CCSEEEECSCC
T ss_pred CceEEEeccCC
Confidence 78999999883
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.74 E-value=0.00079 Score=46.57 Aligned_cols=111 Identities=13% Similarity=0.063 Sum_probs=64.9
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChh--hHHHHHHHhhh----CC--CeEEEEEeeCCCHHHHHHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEV--ELNKCLKEWQS----KG--FVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~--~~~~~~~~~~~----~~--~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+|.|.||+|.+|..+|..++.+|. ++++.++++. +.+....++.+ .. ..+.....+ +.++
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~~-------- 71 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLRI-------- 71 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGGG--------
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHHH--------
Confidence 588999999999999999999993 8999998764 33444444432 12 222222221 2222
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEe
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFIS 153 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~s 153 (218)
+ ..-|++|.+||... -...+..+ .++.|.. +++...+.+.+..+..++.+|
T Consensus 72 ---l-~~aDvVVitAG~~~---~~g~sR~d---l~~~Na~----iv~~i~~~i~~~~~~~iivVt 122 (145)
T d1hyea1 72 ---I-DESDVVIITSGVPR---KEGMSRMD---LAKTNAK----IVGKYAKKIAEICDTKIFVIT 122 (145)
T ss_dssp ---G-TTCSEEEECCSCCC---CTTCCHHH---HHHHHHH----HHHHHHHHHHHHCCCEEEECS
T ss_pred ---h-ccceEEEEeccccc---CCCCChhh---hhhhhHH----HHHHHHHHHhccCCCeEEEEc
Confidence 1 24599999999632 22334433 3344443 445555555555444555443
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.69 E-value=0.00048 Score=47.67 Aligned_cols=114 Identities=15% Similarity=0.087 Sum_probs=64.2
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|.|+||+|.+|..+|..++.+|. ++++.+.++.+.+ ..++....... ....-+ ...+..+. + ..-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~~~-~~~~~~-~~~~~~~~---~-----~~a 69 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIETRA-TVKGYL-GPEQLPDC---L-----KGC 69 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSSSC-EEEEEE-SGGGHHHH---H-----TTC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhhhc-CCCeEE-cCCChHHH---h-----CCC
Confidence 578999999999999999999985 7999998765433 23443321111 111111 12222221 2 245
Q ss_pred cEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 97 NILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 97 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
|++|..||..... ..+..+ .++.|..-.-.+++. +.+. +.+.++++|.
T Consensus 70 DivVitag~~~~~---g~sR~~---ll~~N~~i~~~i~~~----i~~~~p~~iiivvtN 118 (144)
T d1mlda1 70 DVVVIPAGVPRKP---GMTRDD---LFNTNATIVATLTAA----CAQHCPDAMICIISN 118 (144)
T ss_dssp SEEEECCSCCCCT---TCCGGG---GHHHHHHHHHHHHHH----HHHHCTTSEEEECSS
T ss_pred CEEEECCCcCCCC---CCCcch---HHHHHHHHHHHHHHH----HHhcCCCeEEEEecC
Confidence 9999999963211 223222 345555555444444 4444 3456666664
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=97.65 E-value=5.5e-05 Score=54.98 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=53.9
Q ss_pred CcEEEE-ecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALV-TGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlI-tGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
|.+++| +||+|++|...+.-.-..|++|+.+.|+.+..++..+.+.+.+...... .|-.+..+..+.+.+..+..++.
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~-~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVIT-EDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEE-HHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEe-ccccchhHHHHHHHHHHhhccCC
Confidence 444444 7999999999888877889999998887776665555444433322211 11111222333344444444467
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 108 vdvv~D~vg 116 (189)
T d1gu7a2 108 AKLALNCVG 116 (189)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999998876
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.63 E-value=0.00045 Score=48.06 Aligned_cols=114 Identities=17% Similarity=0.122 Sum_probs=68.3
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
..+++|.|.|| |.+|..+|..++.+|. ++++.+++++..+....++.+. ...+.....| .++ +
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~-------l 72 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDD-------C 72 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGG-------T
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHH-------h
Confidence 35678888997 9999999999999884 8999999998876665555432 1222222333 222 1
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|+++.++|...... .+.. +.+..|. .+++...+.+.+. +.+.++++|.
T Consensus 73 -----~daDvvvitag~~~~~~---~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtN 124 (148)
T d1ldna1 73 -----RDADLVVICAGANQKPG---ETRL---DLVDKNI----AIFRSIVESVMASGFQGLFLVATN 124 (148)
T ss_dssp -----TTCSEEEECCSCCCCTT---TCSG---GGHHHHH----HHHHHHHHHHHHHTCCSEEEECSS
T ss_pred -----ccceeEEEecccccccC---cchh---HHHHHHH----HHHHHHHHHHHhhCCCceEEEecC
Confidence 23599999999643221 1111 2233443 3344444444444 4455666654
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.61 E-value=5.3e-05 Score=54.57 Aligned_cols=79 Identities=23% Similarity=0.195 Sum_probs=51.5
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
..|.+|||+||+||.|...+.-.-..|++|+.+.+++++.+...+ + +.+.. .|-.+ ...+... ...++
T Consensus 30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l---Ga~~v---i~~~~--~~~~~~~---~~~~~ 97 (176)
T d1xa0a2 30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L---GAKEV---LARED--VMAERIR---PLDKQ 97 (176)
T ss_dssp GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T---TCSEE---EECC--------------CCSC
T ss_pred CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c---cccee---eecch--hHHHHHH---Hhhcc
Confidence 357899999999999999988888899999999999888655432 2 22222 12221 1112222 21235
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.+.|.
T Consensus 98 gvD~vid~vgg 108 (176)
T d1xa0a2 98 RWAAAVDPVGG 108 (176)
T ss_dssp CEEEEEECSTT
T ss_pred CcCEEEEcCCc
Confidence 79999999883
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.58 E-value=0.00028 Score=50.68 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=53.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC-
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN- 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~- 93 (218)
.|.+|+|+|| |++|...+..+...|+ +|+++++++++++.. +++. .... .|.++. +..+..+++.+..+
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lG---a~~v---i~~~~~-~~~~~~~~i~~~~~~ 98 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIG---ADLT---LNRRET-SVEERRKAIMDITHG 98 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTT---CSEE---EETTTS-CHHHHHHHHHHHTTT
T ss_pred CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-cccc---ceEE---Eecccc-chHHHHHHHHHhhCC
Confidence 5789999997 8999999998889998 799999999887544 3332 1121 233221 22222333333322
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
..+|+++.+.|.
T Consensus 99 ~g~Dvvid~vG~ 110 (182)
T d1vj0a2 99 RGADFILEATGD 110 (182)
T ss_dssp SCEEEEEECSSC
T ss_pred CCceEEeecCCc
Confidence 258999999874
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.56 E-value=0.0019 Score=44.98 Aligned_cols=114 Identities=11% Similarity=0.036 Sum_probs=64.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC---------eEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA---------VVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~---------~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
.+|.|+||+|.+|..++..|+..+. +++...++.+..+....++... ......+...-.+.++
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 77 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA------- 77 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH-------
T ss_pred CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh-------
Confidence 4899999999999999999998663 2333445555555554444433 2233333333222222
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CC-CeEEEEe
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GV-GSIVFIS 153 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~-~~iv~~s 153 (218)
+ ..-|++|..+|... -+..+.+++ ++.|+ .+++...+.+.+. +. ..++++|
T Consensus 78 ----~-~~advViitaG~~~---~pg~~r~dl---~~~N~----~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 78 ----F-KDADYALLVGAAPR---KAGMERRDL---LQVNG----KIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp ----T-TTCSEEEECCCCCC---CTTCCHHHH---HHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ----c-ccccEEEeecCcCC---CCCCcHHHH---HHHHH----HHHHHHHHHHHHhCCCCcEEEEec
Confidence 1 35699999999742 234455554 33444 4445555555653 33 3454555
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.56 E-value=0.00091 Score=47.05 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=70.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
....++|-|.|+ |.+|..+|..++.+|. ++++.+++++..+....++.+. +....... .+.+++
T Consensus 17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~~------ 86 (160)
T d1i0za1 17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSVT------ 86 (160)
T ss_dssp CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGGG------
T ss_pred cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhhc------
Confidence 344567788896 9999999999999995 8999999988877666666432 11222112 223331
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEec
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFISS 154 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~ss 154 (218)
..-|+|+..||.... ...+.. +.++.| ..+++...+.+.+.. .+-++++|.
T Consensus 87 ------~~adiVVitAg~~~~---~g~tR~---~l~~~N----~~i~~~i~~~i~~~~p~aiiivvtN 138 (160)
T d1i0za1 87 ------ANSKIVVVTAGVRQQ---EGESRL---NLVQRN----VNVFKFIIPQIVKYSPDCIIIVVSN 138 (160)
T ss_dssp ------TTCSEEEECCSCCCC---TTCCGG---GGHHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred ------ccccEEEEecCCccc---cCcchH---HHHHHH----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 245999999997432 122222 223334 345566666556543 355666664
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.50 E-value=0.0014 Score=45.97 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=68.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
++..+|.|.|+ |.+|..+|..++.+|. ++++.+++++..+....++.+. .........| .++ +
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~~-------~ 85 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YNV-------S 85 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GGG-------G
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hhh-------h
Confidence 44446777796 9999999999999984 8999999998877666666542 1122111222 222 1
Q ss_pred HhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 89 GSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|++|..||....... +..++ +.....+++...+.+.+. +.+.++++|.
T Consensus 86 -----~~adivvitag~~~~~~~---~R~dl-------l~~N~~i~~~i~~~i~~~~p~~ivivvtN 137 (159)
T d2ldxa1 86 -----ANSKLVIITAGARMVSGQ---TRLDL-------LQRNVAIMKAIVPGVIQNSPDCKIIVVTN 137 (159)
T ss_dssp -----TTEEEEEECCSCCCCTTT---CSSCT-------THHHHHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred -----ccccEEEEecccccCCCC---CHHHH-------HHHHHHHHHHHHHHHhccCCCeEEEEeCC
Confidence 346899999987432211 11111 223344556666666654 3455566664
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.49 E-value=0.00018 Score=52.09 Aligned_cols=78 Identities=17% Similarity=0.159 Sum_probs=50.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+++|||+||+||+|...+...-..|++ |+.+++++++.....+++.. ... .|..+.+. .+.+.++. +..
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga---d~v---i~~~~~~~-~~~~~~~~---~~G 100 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF---DAA---VNYKTGNV-AEQLREAC---PGG 100 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC---SEE---EETTSSCH-HHHHHHHC---TTC
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc---eEE---eeccchhH-HHHHHHHh---ccC
Confidence 478999999999999998888779985 55566776666655554422 222 34443333 33333332 235
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 101 vDvv~D~vG 109 (187)
T d1vj1a2 101 VDVYFDNVG 109 (187)
T ss_dssp EEEEEESSC
T ss_pred ceEEEecCC
Confidence 899999877
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=0.0004 Score=51.72 Aligned_cols=80 Identities=20% Similarity=0.173 Sum_probs=53.1
Q ss_pred ccCCcEEEEecCC----------------CchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC
Q 027816 14 SLKGMTALVTGGT----------------RGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS 77 (218)
Q Consensus 14 ~~~~k~vlItGa~----------------~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~ 77 (218)
+++||+||||+|. |-.|.+||+++..+|++|.++.-..... ....+.. ..+..
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~---------~p~~~~~--~~~~t 71 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP---------TPPFVKR--VDVMT 71 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC---------CCTTEEE--EECCS
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC---------ccccccc--ceehh
Confidence 6789999999884 6789999999999999988875433210 0011222 33444
Q ss_pred HHHHHHHHHHHHhhcCCcccEEEecCCCCCC
Q 027816 78 PDQREKLIQEVGSKFNGKLNILVNNVGTNIR 108 (218)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~id~vv~~ag~~~~ 108 (218)
.++..+.+. +.+ ...|++|++|++...
T Consensus 72 ~~~m~~~~~---~~~-~~~D~~i~aAAvsDf 98 (223)
T d1u7za_ 72 ALEMEAAVN---ASV-QQQNIFIGCAAVADY 98 (223)
T ss_dssp HHHHHHHHH---HHG-GGCSEEEECCBCCSE
T ss_pred hHHHHHHHH---hhh-ccceeEeeeechhhh
Confidence 555444443 333 356999999998653
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.48 E-value=0.00018 Score=51.04 Aligned_cols=80 Identities=14% Similarity=0.145 Sum_probs=54.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+++|.|++|++|...+..+...|+ +|+++++++++.+...+ +. ... ..|.++.+..++..+.+ .++
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~-~G---a~~---~i~~~~~~~~~~~~~~~---~~~ 96 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AG---ADY---VINASMQDPLAEIRRIT---ESK 96 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HT---CSE---EEETTTSCHHHHHHHHT---TTS
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH-cC---Cce---eeccCCcCHHHHHHHHh---hcc
Confidence 467999999999999999998888885 89999999877654433 32 111 13444444444443333 224
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 97 ~~d~vid~~g~ 107 (170)
T d1jvba2 97 GVDAVIDLNNS 107 (170)
T ss_dssp CEEEEEESCCC
T ss_pred cchhhhccccc
Confidence 68999999873
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.42 E-value=0.00033 Score=49.76 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=39.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~ 61 (218)
++|.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~ 61 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 61 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence 5788999987 8999999999999997 7999999999887776554
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.40 E-value=7.1e-05 Score=51.10 Aligned_cols=73 Identities=21% Similarity=0.261 Sum_probs=53.8
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|.++|.|+ |-+|+.++++|.++|..|++++.+++..++.. +.+ ...+..|.++.+.++++- + ...|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~--~~~~~gd~~~~~~l~~a~--i-----~~a~ 66 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSLG--I-----RNFE 66 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC--SEEEECCTTCTTHHHHHT--G-----GGCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC--CcceeeecccchhhhccC--C-----cccc
Confidence 56777877 78999999999999999999999998876543 333 345568999988765541 1 2457
Q ss_pred EEEecCC
Q 027816 98 ILVNNVG 104 (218)
Q Consensus 98 ~vv~~ag 104 (218)
.++...+
T Consensus 67 ~vi~~~~ 73 (134)
T d2hmva1 67 YVIVAIG 73 (134)
T ss_dssp EEEECCC
T ss_pred EEEEEcC
Confidence 7776644
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.37 E-value=0.0046 Score=42.56 Aligned_cols=113 Identities=13% Similarity=0.132 Sum_probs=64.1
Q ss_pred cEEEEecCCCchHHHHHHHHHh-CC--CeEEEecCChhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAG-LG--AVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~-~G--~~V~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++|.|+|++|.+|.++|..|+. .+ .++++.+..+ ..+...-++.+.. ..... ..+-.+.+++
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~~----------- 67 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDATPAL----------- 67 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCHHHH-----------
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCcccc-----------
Confidence 3678999999999999998864 44 5899999865 3444444554432 22221 2223333332
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|++|..||..... ..+..++ ++.|..-. +...+.+.+. +.+.++++|.
T Consensus 68 -~~aDvvvitaG~~~k~---g~~R~dl---~~~N~~i~----~~v~~~i~~~~p~aivivvtN 119 (145)
T d2cmda1 68 -EGADVVLISAGVRRKP---GMDRSDL---FNVNAGIV----KNLVQQVAKTCPKACIGIITN 119 (145)
T ss_dssp -TTCSEEEECCSCCCCT---TCCGGGG---HHHHHHHH----HHHHHHHHHHCTTSEEEECSS
T ss_pred -CCCCEEEECCCccCCC---CcchhhH---HHHHHHHH----HHHHHHHHhhCCCcEEEEccC
Confidence 2359999999974221 2233222 44554433 4444444544 3455666664
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.37 E-value=0.0015 Score=44.77 Aligned_cols=109 Identities=7% Similarity=-0.015 Sum_probs=64.9
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC---CCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++-|.|+ |.+|..++..++.++. ++++.+.+++..+....++... .........| .+++
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~------------ 65 (140)
T d1a5za1 2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL------------ 65 (140)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG------------
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh------------
Confidence 5667796 8899999999998884 8999999998876555554331 1122222222 2221
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEe
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFIS 153 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~s 153 (218)
..-|+++.+||.... ...+..++ +..| ..+++...+.+.+..+ +.++++|
T Consensus 66 ~~adivvitag~~~~---~g~~r~dl---~~~N----~~I~~~i~~~i~~~~p~aivivvt 116 (140)
T d1a5za1 66 KGSDVVIVAAGVPQK---PGETRLQL---LGRN----ARVMKEIARNVSKYAPDSIVIVVT 116 (140)
T ss_dssp TTCSEEEECCCCCCC---SSCCHHHH---HHHH----HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred cCCCEEEEecccccC---CCcchhhh---hccc----cchHHHHHHHHHhcCCCcEEEEeC
Confidence 235999999996432 22333332 3334 3345666666666544 4445545
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.34 E-value=0.0088 Score=42.41 Aligned_cols=114 Identities=11% Similarity=0.046 Sum_probs=63.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-------eEEEecCChh--hHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEV--ELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
.+|.||||+|.||..++..|++.+. .+.+.+.+.. .++...-++.+.. ........- ++..+ .
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~~~------~ 97 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDPYE------V 97 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCHHH------H
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccchh------h
Confidence 4799999999999999999997531 4555665443 3444444444331 112222111 12111 1
Q ss_pred HHhhcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCe-EEEEe
Q 027816 88 VGSKFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGS-IVFIS 153 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~-iv~~s 153 (218)
+ ...|++|..+|.. .-...+.+++ ++.| ..+++...+.+.+. +... |++++
T Consensus 98 ----~-~~aDvVvi~ag~~---rkpg~tR~Dl---l~~N----~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 98 ----F-EDVDWALLIGAKP---RGPGMERAAL---LDIN----GQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp ----T-TTCSEEEECCCCC---CCTTCCHHHH---HHHH----HHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ----c-cCCceEEEeeccC---CCCCCcHHHH---HHHH----HHHHHHHHHHHHhhCCCCcEEEEec
Confidence 1 3569999999873 2234555554 3445 34445555555663 4334 44554
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.22 E-value=0.0033 Score=43.17 Aligned_cols=111 Identities=11% Similarity=-0.026 Sum_probs=64.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCC--hhhHHHHHHHhhh---CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRN--EVELNKCLKEWQS---KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~--~~~~~~~~~~~~~---~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+|.|+||+|.+|..+|..+..+|. ++++.+.+ ++..+....++.+ -.........| .++ +
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~-------~--- 68 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YED-------T--- 68 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGG-------G---
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHH-------h---
Confidence 578999999999999999999985 79999864 3334333334432 11222222223 332 1
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEec
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISS 154 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss 154 (218)
..-|+++..||... . ...+..+ .++.|. .+++...+.+.+..+ +.++++|.
T Consensus 69 --~~aDiVvitaG~~~-~--~g~~R~d---l~~~N~----~I~~~i~~~i~~~~p~~i~ivvtN 120 (142)
T d1o6za1 69 --AGSDVVVITAGIPR-Q--PGQTRID---LAGDNA----PIMEDIQSSLDEHNDDYISLTTSN 120 (142)
T ss_dssp --TTCSEEEECCCCCC-C--TTCCHHH---HHHHHH----HHHHHHHHHHHTTCSCCEEEECCS
T ss_pred --hhcCEEEEeccccc-c--cCCchhh---HHHHHH----HHHHHHHHHHHhcCCCceEEEecC
Confidence 24599999999632 1 2233333 344443 445666666666543 45555553
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.21 E-value=0.0012 Score=45.73 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=66.1
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
|+|.|.|+ |.+|..+|..++.+|. ++++.++++++.+....++.+. .........| .+++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l---------- 67 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL---------- 67 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence 57778895 8999999999999883 8999999998876655555432 1222222222 2221
Q ss_pred cCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEec
Q 027816 92 FNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISS 154 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss 154 (218)
..-|++|.+||...... +..-++=.+.++.| ..+++.+.+.+.+..+ +.++++|.
T Consensus 68 --~~adiVVitaG~~~~~~--~~~g~~R~~l~~~N----~~i~~~i~~~i~~~~p~aivivvtN 123 (146)
T d1hyha1 68 --ADADVVISTLGNIKLQQ--DNPTGDRFAELKFT----SSMVQSVGTNLKESGFHGVLVVISN 123 (146)
T ss_dssp --TTCSEEEECCSCGGGTC---------CTTHHHH----HHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred --ccccEEEEecccccccc--ccCCccHHHHHHHH----HHHHHHHHHHHhhcCCCeEEEEecC
Confidence 23599999999642111 00000111223344 3455666666666544 45555553
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.20 E-value=0.0017 Score=44.66 Aligned_cols=110 Identities=12% Similarity=0.030 Sum_probs=60.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+|.|.|+ |.+|..++..++.++. ++++.+++++..+....++.+.. ........| .++ +
T Consensus 3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~~-----------~- 66 (142)
T d1y6ja1 3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YSD-----------V- 66 (142)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GGG-----------G-
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HHH-----------h-
Confidence 4556687 9999999999999985 89999999887665555655421 122211111 111 1
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhC-CCCeEEEEec
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKAS-GVGSIVFISS 154 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~-~~~~iv~~ss 154 (218)
..-|+++..||.... ...+. .+.++.|. .+++.+.+.+.+. +.+.++++|.
T Consensus 67 ~~adivvitag~~~~---~~~~r---~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN 118 (142)
T d1y6ja1 67 KDCDVIVVTAGANRK---PGETR---LDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN 118 (142)
T ss_dssp TTCSEEEECCCC---------CH---HHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred CCCceEEEecccccC---cCcch---hHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence 245999999996421 12222 23345554 4445555555554 3455566554
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.19 E-value=0.004 Score=42.77 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=65.5
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC---CCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
++.|.|+ |.+|..+|..++.+|. ++++.+++++..+....++.+. .........+ +.+++
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~~------------ 67 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEIC------------ 67 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGGG------------
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHHh------------
Confidence 4667796 9999999999999985 8999999998876655555432 1112222222 22221
Q ss_pred CcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEe
Q 027816 94 GKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFIS 153 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~s 153 (218)
..-|++|..||... -...+..+ .++.|. .+++...+.+.+..+ +.++++|
T Consensus 68 ~daDvVVitaG~~~---~~g~~R~d---l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt 118 (143)
T d1llda1 68 RDADMVVITAGPRQ---KPGQSRLE---LVGATV----NILKAIMPNLVKVAPNAIYMLIT 118 (143)
T ss_dssp TTCSEEEECCCCCC---CTTCCHHH---HHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred hCCcEEEEeccccc---CCCCchhh---hhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence 23599999999632 12334333 344554 344555555555443 4555555
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.19 E-value=0.00017 Score=51.40 Aligned_cols=44 Identities=27% Similarity=0.282 Sum_probs=37.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
.+.+|||+||+||+|...+...-..|++|+.+.+++++.+.+.+
T Consensus 23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~ 66 (167)
T d1tt7a2 23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ 66 (167)
T ss_dssp GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence 46689999999999999987777789999999999888665543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.18 E-value=0.00069 Score=48.20 Aligned_cols=79 Identities=18% Similarity=0.268 Sum_probs=53.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|.+|+|.|+ ||+|...+.++...|+ +|+++++++++.+...+ +. .... .|-.+ .+.+.+..+.+. +
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~G---a~~~---i~~~~~~~~~~~~~~~~~---~ 96 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VG---ATEC---VNPQDYKKPIQEVLTEMS---N 96 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TT---CSEE---ECGGGCSSCHHHHHHHHT---T
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-hC---CeeE---EecCCchhHHHHHHHHHh---c
Confidence 4689999999 6899999999999985 89999999988765433 21 1111 12211 233444444442 2
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|++|.+.|.
T Consensus 97 ~G~D~vid~~G~ 108 (176)
T d2jhfa2 97 GGVDFSFEVIGR 108 (176)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCCEEEecCCc
Confidence 468999999884
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.18 E-value=0.0017 Score=45.30 Aligned_cols=46 Identities=11% Similarity=-0.153 Sum_probs=37.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~ 62 (218)
+.++|.|.|+ |.+|..+|..++.++. ++++.+.+++..+....++.
T Consensus 6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~ 52 (154)
T d1pzga1 6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLS 52 (154)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHH
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHh
Confidence 4567888897 9999999999998884 89999999887766655553
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.16 E-value=0.0063 Score=41.63 Aligned_cols=111 Identities=8% Similarity=-0.069 Sum_probs=64.5
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++.|.|+ |.+|..+|..++.+|. ++++.+.+++..+....++.+. ......... .|.+++
T Consensus 2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~~----------- 67 (142)
T d1ojua1 2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL----------- 67 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------
T ss_pred EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHHh-----------
Confidence 5677796 9999999999998884 7999999998876555555321 111111221 122221
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEec
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISS 154 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss 154 (218)
..-|+++..||.... ...+.. +.+..|. .+++...+.+.+..+ +.++++|.
T Consensus 68 -~~adiVvitag~~~~---~g~~r~---~l~~~n~----~i~~~i~~~i~~~~p~aivivvtN 119 (142)
T d1ojua1 68 -KGSEIIVVTAGLARK---PGMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVTN 119 (142)
T ss_dssp -TTCSEEEECCCCCCC---SSCCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred -ccccEEEEeccccCC---CCCchH---HHHHHhh----HHHHHHHHHHHhhCCCcEEEEecC
Confidence 245999999986422 223332 2333443 344555555566543 44555553
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.15 E-value=0.012 Score=40.12 Aligned_cols=73 Identities=14% Similarity=0.031 Sum_probs=48.2
Q ss_pred EEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 19 TALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+|.|+|| |.+|..++..++.+| .++++.+.+++..+....++... .........+ +.+++
T Consensus 2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~~----------- 67 (142)
T d1guza1 2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYADT----------- 67 (142)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGGG-----------
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHHh-----------
Confidence 4677896 999999999999998 48999999988766544444321 1122222222 22221
Q ss_pred CCcccEEEecCCCC
Q 027816 93 NGKLNILVNNVGTN 106 (218)
Q Consensus 93 ~~~id~vv~~ag~~ 106 (218)
..-|+++.++|..
T Consensus 68 -~dadvvvitag~~ 80 (142)
T d1guza1 68 -ANSDIVIITAGLP 80 (142)
T ss_dssp -TTCSEEEECCSCC
T ss_pred -cCCeEEEEEEecC
Confidence 2459999999964
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.00035 Score=50.12 Aligned_cols=42 Identities=29% Similarity=0.328 Sum_probs=36.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.+.++||+||+||+|...+.-.-..|++|+.+++++++.+..
T Consensus 31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~ 72 (177)
T d1o89a2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (177)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence 345899999999999999888888999999999999886544
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.12 E-value=0.00094 Score=47.49 Aligned_cols=78 Identities=14% Similarity=0.182 Sum_probs=50.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCe-EEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAV-VHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|.|+ |++|...+..+...|++ |+++++++++++... ++.. .. ..|..+.+ +.+ ++++..++
T Consensus 28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga--~~----~i~~~~~~-~~~---~i~~~t~g 95 (174)
T d1f8fa2 28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGA--TH----VINSKTQD-PVA---AIKEITDG 95 (174)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTC--SE----EEETTTSC-HHH---HHHHHTTS
T ss_pred CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCC--eE----EEeCCCcC-HHH---HHHHHcCC
Confidence 4678999997 89999999888788884 566777777665543 3321 11 13444433 322 33333335
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.+.|.
T Consensus 96 g~D~vid~~G~ 106 (174)
T d1f8fa2 96 GVNFALESTGS 106 (174)
T ss_dssp CEEEEEECSCC
T ss_pred CCcEEEEcCCc
Confidence 78999999883
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.11 E-value=0.00054 Score=48.89 Aligned_cols=79 Identities=9% Similarity=0.130 Sum_probs=51.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++... ++.. . + .+|..+.+..+ .+.+..+ +.
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa---~-~--~i~~~~~~~~~-~v~~~t~--g~ 95 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGA---T-D--ILNYKNGHIED-QVMKLTN--GK 95 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTC---S-E--EECGGGSCHHH-HHHHHTT--TS
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCc---c-c--cccccchhHHH-HHHHHhh--cc
Confidence 4678899987 8999999888888998 7999999988765543 3321 1 1 13443322222 2222222 12
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|++|.++|.
T Consensus 96 G~D~vid~~g~ 106 (174)
T d1jqba2 96 GVDRVIMAGGG 106 (174)
T ss_dssp CEEEEEECSSC
T ss_pred CcceEEEccCC
Confidence 48999999884
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.11 E-value=0.00035 Score=49.75 Aligned_cols=74 Identities=19% Similarity=0.227 Sum_probs=50.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|++|+|+||+|++|...+..+...|++|+.+++++++.+... ++. .... .|..+.. ++..+ +..
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lG---a~~~---i~~~~~~------~~~~~--~~g 91 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALG---AEEA---ATYAEVP------ERAKA--WGG 91 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTT---CSEE---EEGGGHH------HHHHH--TTS
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccc---ccee---eehhhhh------hhhhc--ccc
Confidence 5789999999999999999888889999999998887665443 332 1111 2332211 22222 246
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
+|+++.+.|
T Consensus 92 ~D~v~d~~G 100 (171)
T d1iz0a2 92 LDLVLEVRG 100 (171)
T ss_dssp EEEEEECSC
T ss_pred ccccccccc
Confidence 899998765
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.10 E-value=0.0019 Score=42.38 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=34.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.++++||+|+|.|++. +|..-++.|++.|++|++.+....
T Consensus 7 ~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 7 FCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp EECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred EEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence 3578999999999755 999999999999999988876554
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.08 E-value=0.0045 Score=43.24 Aligned_cols=80 Identities=14% Similarity=0.058 Sum_probs=53.3
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh--------h--CCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ--------S--KGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------~--~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+|.|.|+ |-+|.++|+.|.+.|++|++.+|+++..+...+.-. + ...++..+.+ ..+.++++++++
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l 77 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL 77 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence 4667765 999999999999999999999999887765544210 0 1223333332 367788888888
Q ss_pred HhhcCCcccEEEecC
Q 027816 89 GSKFNGKLNILVNNV 103 (218)
Q Consensus 89 ~~~~~~~id~vv~~a 103 (218)
...+ .+=.+|+..+
T Consensus 78 ~~~l-~~~~iv~~~~ 91 (165)
T d2f1ka2 78 IPHL-SPTAIVTDVA 91 (165)
T ss_dssp GGGS-CTTCEEEECC
T ss_pred hhhc-ccccceeecc
Confidence 7765 2223444443
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.07 E-value=0.0014 Score=46.04 Aligned_cols=42 Identities=19% Similarity=0.310 Sum_probs=35.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
.|.+|+|.|+ |++|...+..+...|++|+.+++++++++...
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~ 68 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR 68 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh
Confidence 4678999886 99999988888889999999999988876443
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.05 E-value=0.0047 Score=42.29 Aligned_cols=111 Identities=13% Similarity=0.088 Sum_probs=61.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
|+|-|.|+ |.+|..+|..|+.++. ++++.+.+++..+....++... ........+ .+.+++
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~----------- 67 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT----------- 67 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence 45667786 9999999999998884 8999999888766555454321 111111111 112221
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCC-CCeEEEEe
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASG-VGSIVFIS 153 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~-~~~iv~~s 153 (218)
..-|++|.+||..... ..+. .+.++.|. .+++...+.+.+.. .+.++++|
T Consensus 68 -~~advvvitag~~~~~---~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt 118 (142)
T d1uxja1 68 -ANSDVIVVTSGAPRKP---GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVN 118 (142)
T ss_dssp -TTCSEEEECCSCC---------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred -cCCCEEEEeeeccCCc---Ccch---hHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence 2359999999964321 1222 22334444 45566666666644 34455544
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.03 E-value=0.00028 Score=44.99 Aligned_cols=38 Identities=13% Similarity=0.163 Sum_probs=33.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
+++||+|+|.|. |.-|.++|+.|.++|++|.+.+.+..
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 578999999998 66799999999999999999987554
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.00 E-value=0.0019 Score=44.73 Aligned_cols=76 Identities=14% Similarity=0.024 Sum_probs=57.0
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcccE
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLNI 98 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id~ 98 (218)
+++|.|. |.+|..++++|.++|.+|+++..+++......++.... .+..+..|.++.+.++++-- .+.|.
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a~i-------~~a~~ 74 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAGI-------DRCRA 74 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHTT-------TTCSE
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHhcc-------ccCCE
Confidence 6788887 69999999999999999999999887665555554333 36678899999887655422 24577
Q ss_pred EEecCC
Q 027816 99 LVNNVG 104 (218)
Q Consensus 99 vv~~ag 104 (218)
++...+
T Consensus 75 vi~~~~ 80 (153)
T d1id1a_ 75 ILALSD 80 (153)
T ss_dssp EEECSS
T ss_pred EEEccc
Confidence 887644
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.99 E-value=0.002 Score=44.56 Aligned_cols=70 Identities=11% Similarity=0.092 Sum_probs=49.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.-|+|.|.||.|-+|..+|+.|.+.|++|.+.+|+......... ....+....+ ....+...+.++....
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~~~---~~~~~~~v~~~~~~~~ 77 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIVSV---PINLTLETIERLKPYL 77 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEECS---CGGGHHHHHHHHGGGC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhcccccccc---chhhheeeeecccccc
Confidence 44689999999999999999999999999999998765443221 1223333333 3455666677776654
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.001 Score=48.27 Aligned_cols=43 Identities=26% Similarity=0.224 Sum_probs=37.3
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
|+|.|.|| |-+|..+|..++..|++|++.+++++.++...+.+
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i 47 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGI 47 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhH
Confidence 57889998 88999999999999999999999998876655544
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.93 E-value=0.0055 Score=43.47 Aligned_cols=79 Identities=15% Similarity=0.252 Sum_probs=52.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHH-HHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ-REKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~~~ 93 (218)
.|.+|+|.|+ ||+|...+..+...|+ +|+.+++++++++-..+ +.. ... .|..+.+. .+...+.. . +
T Consensus 29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA---~~~---in~~~~~~~~~~~~~~~-~--g 97 (176)
T d1d1ta2 29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGA---TEC---ISPKDSTKPISEVLSEM-T--G 97 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTC---SEE---ECGGGCSSCHHHHHHHH-H--T
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCC---cEE---ECccccchHHHHHHHHh-c--c
Confidence 5789999986 8999999999999995 89999999998875443 322 122 22222222 22222222 2 3
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.+.|.
T Consensus 98 ~G~d~vi~~~g~ 109 (176)
T d1d1ta2 98 NNVGYTFEVIGH 109 (176)
T ss_dssp SCCCEEEECSCC
T ss_pred ccceEEEEeCCc
Confidence 468999998873
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.84 E-value=0.0067 Score=41.93 Aligned_cols=114 Identities=10% Similarity=0.049 Sum_probs=65.0
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC----CCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK----GFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+|-|.|+ |.+|..++..+..++. ++++.+++++..+....++... .........+ +.++ +
T Consensus 5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-----------~- 69 (150)
T d1t2da1 5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-----------L- 69 (150)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-----------G-
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-----------c-
Confidence 5677795 9999999998888884 8999999888776655555321 1222222222 1222 1
Q ss_pred CcccEEEecCCCCCCCCCC--CCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCC-CeEEEEec
Q 027816 94 GKLNILVNNVGTNIRKPTI--EYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGV-GSIVFISS 154 (218)
Q Consensus 94 ~~id~vv~~ag~~~~~~~~--~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~-~~iv~~ss 154 (218)
..-|+++.++|........ +.+..+ .++.|. .+++.+.+.+.+..+ +.++++|.
T Consensus 70 ~~advvvitag~~~~~g~~~~~~~R~~---l~~~N~----~iv~~i~~~i~~~~p~aivivvtN 126 (150)
T d1t2da1 70 AGADVVIVTAGFTKAPGKSDKEWNRDD---LLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN 126 (150)
T ss_dssp TTCSEEEECCSCSSCTTCCSTTCCGGG---GHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCCcEEEEecccccCCCCCccccchhH---HHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence 2469999999975321111 112212 234443 444555555555544 44555553
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.83 E-value=0.0021 Score=46.63 Aligned_cols=80 Identities=24% Similarity=0.263 Sum_probs=51.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|.|| |++|...+..+...|+ +|+++++++++++...+ + +.... .|-.+ +++.+.+.++.+ +.
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-~---Ga~~~---~~~~~-~~~~~~i~~~t~--g~ 93 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q---GFEIA---DLSLD-TPLHEQIAALLG--EP 93 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T---TCEEE---ETTSS-SCHHHHHHHHHS--SS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-c---cccEE---EeCCC-cCHHHHHHHHhC--CC
Confidence 4779999987 8999888888777887 79999999887654432 2 22221 22223 333333333322 23
Q ss_pred cccEEEecCCCC
Q 027816 95 KLNILVNNVGTN 106 (218)
Q Consensus 95 ~id~vv~~ag~~ 106 (218)
..|+++.+.|..
T Consensus 94 g~D~vid~vG~~ 105 (195)
T d1kola2 94 EVDCAVDAVGFE 105 (195)
T ss_dssp CEEEEEECCCTT
T ss_pred CcEEEEECcccc
Confidence 689999998853
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.80 E-value=0.0022 Score=45.08 Aligned_cols=74 Identities=19% Similarity=0.294 Sum_probs=50.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+|+|.|+ |++|...+..+-..|++++++++++++.+. .+++... . ..|..+.+... .. ...
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~lGad---~---~i~~~~~~~~~-------~~-~~~ 93 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALGAD---E---VVNSRNADEMA-------AH-LKS 93 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHTCS---E---EEETTCHHHHH-------TT-TTC
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-HhccCCc---E---EEECchhhHHH-------Hh-cCC
Confidence 4789999986 899999888887899998899998887653 3344221 1 14555544321 11 146
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
+|+++.+.|.
T Consensus 94 ~D~vid~~g~ 103 (168)
T d1uufa2 94 FDFILNTVAA 103 (168)
T ss_dssp EEEEEECCSS
T ss_pred Cceeeeeeec
Confidence 8999999874
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.80 E-value=0.0012 Score=46.67 Aligned_cols=78 Identities=21% Similarity=0.271 Sum_probs=50.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++...+ + +.. +. .|.. .+.+++..+... +.
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~---ga~-~~--i~~~-~~~~~~~~~~~~---~~ 99 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L---GAD-HV--VDAR-RDPVKQVMELTR---GR 99 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T---TCS-EE--EETT-SCHHHHHHHHTT---TC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c---ccc-ee--ecCc-ccHHHHHHHhhC---CC
Confidence 3679999886 9999998888888886 67888888877665443 2 111 11 2322 234444443221 23
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
.+|+++.++|.
T Consensus 100 g~d~vid~~g~ 110 (172)
T d1h2ba2 100 GVNVAMDFVGS 110 (172)
T ss_dssp CEEEEEESSCC
T ss_pred CceEEEEecCc
Confidence 58999999883
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.75 E-value=0.0033 Score=44.64 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=51.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|.+|+|.|+ |+||...+..+-..|+ +|+++++++++++-. +++.. ... .|..+ .+..++..+.+. +
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~Ga---~~~---i~~~~~~~~~~~~~~~~~---~ 96 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGA---TDC---LNPRELDKPVQDVITELT---A 96 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTC---SEE---ECGGGCSSCHHHHHHHHH---T
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHhCC---Ccc---cCCccchhhhhhhHhhhh---c
Confidence 4679999975 9999999999999998 688889998876433 33321 111 22211 123333333332 3
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.+.|.
T Consensus 97 ~G~d~vie~~G~ 108 (174)
T d1e3ia2 97 GGVDYSLDCAGT 108 (174)
T ss_dssp SCBSEEEESSCC
T ss_pred CCCcEEEEeccc
Confidence 578999999883
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.74 E-value=0.0016 Score=46.40 Aligned_cols=47 Identities=21% Similarity=0.197 Sum_probs=40.0
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 62 (218)
+++||.|+|.|+ ||.+++++..|.+.| +|.+..|+.++.+...+.+.
T Consensus 15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~ 61 (177)
T d1nvta1 15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIA 61 (177)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHH
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHH
Confidence 578999999986 578999999998777 99999999999887776654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.67 E-value=0.0021 Score=45.53 Aligned_cols=42 Identities=21% Similarity=0.089 Sum_probs=37.0
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
+|++.|.|| |.+|..+|..|+++|++|.+.+|+++..+...+
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD 42 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 478899998 899999999999999999999999887766544
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.63 E-value=0.0083 Score=42.40 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=56.5
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh---------------hCCCeEEEEEeeCCCHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ---------------SKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~v~~~~~D~~~~~~~~~ 83 (218)
.|-|.|. |-+|..+|++|++.|++|++.+|++++.+.+.++-. +.......+...+.+.+.+.+
T Consensus 4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~ 82 (176)
T d2pgda2 4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (176)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence 4666765 899999999999999999999999998877654311 111122334445667778888
Q ss_pred HHHHHHhhcCCcccEEEecC
Q 027816 84 LIQEVGSKFNGKLNILVNNV 103 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~a 103 (218)
..+.+.... .+=+++|.+.
T Consensus 83 v~~~l~~~~-~~g~iiid~s 101 (176)
T d2pgda2 83 FIEKLVPLL-DIGDIIIDGG 101 (176)
T ss_dssp HHHHHHHHC-CTTCEEEECS
T ss_pred HHHHHHhcc-ccCcEEEecC
Confidence 887777664 2335555553
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.62 E-value=0.0014 Score=47.26 Aligned_cols=43 Identities=23% Similarity=0.172 Sum_probs=36.9
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
|+|-|.|| |-+|+.+|..++..|++|++.+++++.+++..+.+
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i 47 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA 47 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence 46788888 88999999999999999999999998877655544
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.61 E-value=0.0054 Score=42.77 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=34.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
.|.+++|.|+ |++|...+..+...|++|+++++++++++..
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~ 67 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA 67 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence 4678999875 8999998888888999999999999887644
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.59 E-value=0.0024 Score=45.29 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=52.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHH-HHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPD-QREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~-~~~~~~~~~~~~~~ 93 (218)
.|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++... ++.. ... .|.++.+ .+.+..... .+
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa---~~~---i~~~~~d~~~~~~~~~~---~~ 95 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGA---TEC---LNPKDYDKPIYEVICEK---TN 95 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTC---SEE---ECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCC---cEE---EcCCCchhHHHHHHHHh---cC
Confidence 4779999986 8999999999999997 7999999998876553 3321 111 2322222 122222222 23
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+..|++|.+.|.
T Consensus 96 ~G~d~vid~~g~ 107 (174)
T d1p0fa2 96 GGVDYAVECAGR 107 (174)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEEEEcCCC
Confidence 468999999873
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.57 E-value=0.0016 Score=45.92 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=35.3
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
.|.+++|.|+ |++|...+..+...|++|+++++++++++...
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~ 68 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM 68 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh
Confidence 4789999987 89999988777788999999999988876543
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.56 E-value=0.00084 Score=46.56 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=32.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~ 50 (218)
+.++||++||.|| |.+|..-++.|++.|++|.+++..
T Consensus 9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4688999999999 569999999999999999888653
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.50 E-value=0.0021 Score=45.40 Aligned_cols=79 Identities=18% Similarity=0.265 Sum_probs=50.8
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCC-HHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAAS-PDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~-~~~~~~~~~~~~~~~~ 93 (218)
.|.+|+|.|+ ||+|...+..+...|+ +|+.+++++++++. .+++... - . .|..+ .+.+.+.+.+. .+
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~lGa~---~-~--i~~~~~~~~~~~~~~~~---~~ 96 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEFGAT---E-C--INPQDFSKPIQEVLIEM---TD 96 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHHTCS---E-E--ECGGGCSSCHHHHHHHH---TT
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHhCCc---E-E--EeCCchhhHHHHHHHHH---cC
Confidence 4679999998 5899999888888996 67778888877643 3444321 1 1 12221 23333334433 23
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.+.|.
T Consensus 97 ~g~D~vid~~G~ 108 (176)
T d2fzwa2 97 GGVDYSFECIGN 108 (176)
T ss_dssp SCBSEEEECSCC
T ss_pred CCCcEeeecCCC
Confidence 468999999883
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.36 E-value=0.047 Score=37.48 Aligned_cols=78 Identities=14% Similarity=0.119 Sum_probs=45.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-------eEEEecCChh--hHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-------VVHTCSRNEV--ELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
.+|.|+||+|.+|.+++..|++.+- .+++.+.+.. ..+....++.+. ......+..--.+.+.
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------- 76 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIA------- 76 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHH-------
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccc-------
Confidence 4789999999999999999987542 4666655443 333433333332 1122222211111111
Q ss_pred HHhhcCCcccEEEecCCCCC
Q 027816 88 VGSKFNGKLNILVNNVGTNI 107 (218)
Q Consensus 88 ~~~~~~~~id~vv~~ag~~~ 107 (218)
+ ...|++|..+|...
T Consensus 77 ----~-~~~dvVVitag~~~ 91 (154)
T d5mdha1 77 ----F-KDLDVAILVGSMPR 91 (154)
T ss_dssp ----T-TTCSEEEECCSCCC
T ss_pred ----c-CCceEEEEecccCC
Confidence 1 35699999999753
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.33 E-value=0.0049 Score=44.83 Aligned_cols=43 Identities=26% Similarity=0.370 Sum_probs=37.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
+++||+|.|-| .|.+|.++|+.|.+.|++|++.+.+.+.....
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~ 66 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHA 66 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence 68999999998 66799999999999999999999988776543
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.28 E-value=0.041 Score=38.15 Aligned_cols=82 Identities=9% Similarity=0.010 Sum_probs=53.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC--eEEEecCChhhHHHHHHHhh------------hCCCeEEEEEeeCCCHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNEVELNKCLKEWQ------------SKGFVVSGSVCDAASPDQREK 83 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------------~~~~~v~~~~~D~~~~~~~~~ 83 (218)
|.|+|.|+ |-||.++|+.|.+.|+ +|+..+++++..+...+.-. ....++..+ ....+.+.+
T Consensus 2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~ 77 (171)
T d2g5ca2 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFRE 77 (171)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHH
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhh
Confidence 46888875 8999999999999996 78999999888776554311 001122222 223667778
Q ss_pred HHHHHHhhcCCcccEEEecCC
Q 027816 84 LIQEVGSKFNGKLNILVNNVG 104 (218)
Q Consensus 84 ~~~~~~~~~~~~id~vv~~ag 104 (218)
+++++.+.. .+-.+++..++
T Consensus 78 vl~~l~~~~-~~~~ii~d~~s 97 (171)
T d2g5ca2 78 IAKKLSYIL-SEDATVTDQGS 97 (171)
T ss_dssp HHHHHHHHS-CTTCEEEECCS
T ss_pred hhhhhhccc-ccccccccccc
Confidence 888877765 23244444444
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.28 E-value=0.0024 Score=44.47 Aligned_cols=35 Identities=26% Similarity=0.228 Sum_probs=31.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
++|.|.|+ |.||..++..|++.|++|.+++|+.+.
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence 46889998 999999999999999999999998764
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.071 Score=34.50 Aligned_cols=84 Identities=13% Similarity=0.155 Sum_probs=61.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+.+|.|.| +|=+|+-++....+.|+++++.+++++..... ..-..+..|..|.+.+.++...+ .
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~--------va~~~i~~~~~d~~~l~~~~~~~------~ 74 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH--------VAHRSHVINMLDGDALRRVVELE------K 74 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--------GSSEEEECCTTCHHHHHHHHHHH------C
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh--------cCCeEEECCCCCHHHHHHHHHhh------C
Confidence 456899998 56799999999999999999999877643211 11244668999999988887765 4
Q ss_pred ccEEEecCCCCCCCCCCCCCHHHHHHH
Q 027816 96 LNILVNNVGTNIRKPTIEYSAEEYSKI 122 (218)
Q Consensus 96 id~vv~~ag~~~~~~~~~~~~~~~~~~ 122 (218)
+|+|-. .+++++.+.+++.
T Consensus 75 ~DviT~--------E~EnI~~~~L~~l 93 (111)
T d1kjqa2 75 PHYIVP--------EIEAIATDMLIQL 93 (111)
T ss_dssp CSEEEE--------CSSCSCHHHHHHH
T ss_pred CceEEE--------EecCcCHHHHHHH
Confidence 687763 3667777666544
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.22 E-value=0.0062 Score=42.83 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=49.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHH-HHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQ-REKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~-~~~~~~~~~~~~~ 93 (218)
.|.+|+|.|+ |++|...+..+...|. +|+.+++++++++... ++.. ... .|..+.++ .++...... +
T Consensus 28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GA---d~~---in~~~~~~~~~~~~~~~~---~ 96 (175)
T d1cdoa2 28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGA---TDF---VNPNDHSEPISQVLSKMT---N 96 (175)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTC---CEE---ECGGGCSSCHHHHHHHHH---T
T ss_pred CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCC---cEE---EcCCCcchhHHHHHHhhc---c
Confidence 4678999986 6788888888888886 7999999998876543 3321 111 22222221 222333222 2
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+.+|+++.+.|.
T Consensus 97 ~G~d~vid~~G~ 108 (175)
T d1cdoa2 97 GGVDFSLECVGN 108 (175)
T ss_dssp SCBSEEEECSCC
T ss_pred CCcceeeeecCC
Confidence 468999999883
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.06 E-value=0.052 Score=39.04 Aligned_cols=77 Identities=16% Similarity=0.142 Sum_probs=59.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
-+++|++||=.||+.|. ++..++.+|+ +|+.++.+++..+.+.+++...+.....+..|..+
T Consensus 43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~-------------- 105 (201)
T d1wy7a1 43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-------------- 105 (201)
T ss_dssp TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG--------------
T ss_pred CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh--------------
Confidence 35789999999998773 3334567786 89999999999888888877767777878888532
Q ss_pred cCCcccEEEecCCCC
Q 027816 92 FNGKLNILVNNVGTN 106 (218)
Q Consensus 92 ~~~~id~vv~~ag~~ 106 (218)
+.++.|+||.|..+.
T Consensus 106 ~~~~fD~Vi~nPP~~ 120 (201)
T d1wy7a1 106 FNSRVDIVIMNPPFG 120 (201)
T ss_dssp CCCCCSEEEECCCCS
T ss_pred hCCcCcEEEEcCccc
Confidence 125789999998764
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.00 E-value=0.017 Score=42.71 Aligned_cols=74 Identities=15% Similarity=0.062 Sum_probs=56.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.+++||=.||+.| .++..|+++|++|+.++.+++-++.+.+.....+..+...+.|+.+.+ +++.
T Consensus 41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~------------~~~~ 105 (251)
T d1wzna1 41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA------------FKNE 105 (251)
T ss_dssp CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC------------CCSC
T ss_pred CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc------------cccc
Confidence 4578999999987 445678899999999999998888777777666667888888876543 1246
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
.|.|++.-+
T Consensus 106 fD~I~~~~~ 114 (251)
T d1wzna1 106 FDAVTMFFS 114 (251)
T ss_dssp EEEEEECSS
T ss_pred cchHhhhhh
Confidence 798887643
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.93 E-value=0.0091 Score=41.85 Aligned_cols=48 Identities=21% Similarity=0.264 Sum_probs=40.7
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
..+++||.++|.|-|.-.|+-++..|.++|+.|..+.+....+.+..+
T Consensus 32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~ 79 (166)
T d1b0aa1 32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE 79 (166)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence 357889999999999999999999999999999998877665554443
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=95.92 E-value=0.24 Score=38.02 Aligned_cols=161 Identities=13% Similarity=0.057 Sum_probs=88.5
Q ss_pred CCcEEEEecCC-CchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCC---CeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 16 KGMTALVTGGT-RGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG---FVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 16 ~~k~vlItGa~-~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+|++||=..|. |+++. +++..|+ +|+.++.+....+...+++...+ ..+..++.|+ .+.++...+
T Consensus 144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~------~~~l~~~~~ 213 (317)
T d2b78a2 144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV------FDYFKYARR 213 (317)
T ss_dssp BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH------HHHHHHHHH
T ss_pred CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccH------HHHHHHHHh
Confidence 57888766655 44443 3456787 79999999998887777765332 3577778774 233444444
Q ss_pred hcCCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhh
Q 027816 91 KFNGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGAT 170 (218)
Q Consensus 91 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s 170 (218)
+ +.+.|+||..+..+...+-.-.+. ......+++.+++.++.. |.+++ +|-.....
T Consensus 214 ~-~~~fD~Ii~DPP~f~~~~~~~~~~----------~~~~~~L~~~a~~ll~pg--G~l~~-~scs~~~~---------- 269 (317)
T d2b78a2 214 H-HLTYDIIIIDPPSFARNKKEVFSV----------SKDYHKLIRQGLEILSEN--GLIIA-STNAANMT---------- 269 (317)
T ss_dssp T-TCCEEEEEECCCCC-----CCCCH----------HHHHHHHHHHHHHTEEEE--EEEEE-EECCTTSC----------
T ss_pred h-cCCCCEEEEcChhhccchhHHHHH----------HHHHHHHHHHHHHHcCCC--CEEEE-EeCCccCC----------
Confidence 4 257899999966433221111111 122334556666665432 45554 44322111
Q ss_pred HHHHHHHHHHHHHHhccCCeEEEEeecccccChhhHHHHhccc
Q 027816 171 KAAMNQLTRNLACEWAKDNIRTNSVAPWYTKTSLVERVMFSNL 213 (218)
Q Consensus 171 K~a~~~~~~~l~~e~~~~gv~v~~v~PG~v~t~~~~~~~~~~~ 213 (218)
.+.|.+.+.+.+...+.++..+..-+.|=|....+.+..+
T Consensus 270 ---~~~f~~~v~~a~~~~~~~~~~~~~~~~DfP~~~~~pe~~Y 309 (317)
T d2b78a2 270 ---VSQFKKQIEKGFGKQKHTYLDLQQLPSDFAVNVQDESSNY 309 (317)
T ss_dssp ---HHHHHHHHHHHHTTCCCEEEEEECCCTTSCCCTTCGGGCC
T ss_pred ---HHHHHHHHHHHHHHcCCeEEEeccCCCCCCCCCCCCCCCC
Confidence 2334445555555667777777644455555555554443
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=95.91 E-value=0.017 Score=40.01 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=33.3
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
+|-|.| .|-+|..+|+.|+++|++|.+.+|++++.+.+.+
T Consensus 2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~ 41 (161)
T d1vpda2 2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA 41 (161)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH
Confidence 355565 4899999999999999999999999988776543
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=95.91 E-value=0.017 Score=40.65 Aligned_cols=62 Identities=16% Similarity=0.093 Sum_probs=46.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-------------CCeEEEEEeeCCCHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-------------GFVVSGSVCDAASPDQ 80 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~v~~~~~D~~~~~~ 80 (218)
.|++||..||+.| ..+..|+++|++|+.++.++...+...+..... .........|..+...
T Consensus 20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 94 (201)
T d1pjza_ 20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 94 (201)
T ss_dssp TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence 5789999999988 367789999999999999999888777665332 2334566777665443
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=95.89 E-value=0.014 Score=43.24 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=58.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
...+++||=.||+.|. ++..|+++|.+|+.++.+++-++.+.+.....+..+.++..|+.+.+ +.
T Consensus 35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------------~~ 99 (246)
T d1y8ca_ 35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------IN 99 (246)
T ss_dssp TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------CS
T ss_pred CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc------------cc
Confidence 3457899999999886 77788999999999999999888777766666667888888875432 12
Q ss_pred CcccEEEecCC
Q 027816 94 GKLNILVNNVG 104 (218)
Q Consensus 94 ~~id~vv~~ag 104 (218)
++.|+|++..+
T Consensus 100 ~~fD~i~~~~~ 110 (246)
T d1y8ca_ 100 RKFDLITCCLD 110 (246)
T ss_dssp CCEEEEEECTT
T ss_pred ccccccceeee
Confidence 46798887544
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.86 E-value=0.007 Score=42.68 Aligned_cols=46 Identities=24% Similarity=0.325 Sum_probs=40.4
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
..+++||.++|.|.|.-.|+-++..|+++|+.|..+......+.+.
T Consensus 34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~ 79 (170)
T d1a4ia1 34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE 79 (170)
T ss_dssp TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH
T ss_pred CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHH
Confidence 4578999999999999999999999999999999998877665543
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.81 E-value=0.035 Score=40.57 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=36.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
.+++||..||+.| ..+..|+++|++|+.++-+++..+.+.++.
T Consensus 45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~ 87 (229)
T d2bzga1 45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ 87 (229)
T ss_dssp CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence 5679999999987 457788999999999999999887776654
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=95.77 E-value=0.19 Score=35.75 Aligned_cols=146 Identities=15% Similarity=0.069 Sum_probs=80.2
Q ss_pred cCCcEEEEecC--CCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 15 LKGMTALVTGG--TRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 15 ~~~k~vlItGa--~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
..|+.+++... .......++..|.+.|..++.+....+ .+.+. +.+.+ ...
T Consensus 23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~~---l~~~~-~~~ 75 (209)
T d2fr1a2 23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRDE---LAERL-RSV 75 (209)
T ss_dssp CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHHH---HHHHH-TTS
T ss_pred CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHHH---HHHHh-hcc
Confidence 34544444322 234777788888888987765543221 11222 22222 222
Q ss_pred CCcccEEEecCCCCCCCCCCCCCHHHHHHHHHhhhhhHHHHHHHHhHHhHhCCCCeEEEEecCCccCcCCCCchhhhhHH
Q 027816 93 NGKLNILVNNVGTNIRKPTIEYSAEEYSKIMTTNFESTYHLCQLVYPLLKASGVGSIVFISSVGGLSHVGSGSIYGATKA 172 (218)
Q Consensus 93 ~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~nv~~~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 172 (218)
+.++.||+..+......-. .. . ....+...+.++|++. ......++++++..+-. .......-....+
T Consensus 76 -~~~~~vv~l~~~~~~~~~~-~~--~----~~~~~~~~l~l~qal~---~~~~~~~l~~vT~~a~~-~~~~d~~~~p~~A 143 (209)
T d2fr1a2 76 -GEVAGVLSLLAVDEAEPEE-AP--L----ALASLADTLSLVQAMV---SAELGCPLWTVTESAVA-TGPFERVRNAAHG 143 (209)
T ss_dssp -CCCSEEEECTTTTCCCCSS-CG--G----GCHHHHHHHHHHHHHH---HTTCCCCEEEEEESCSC-SSTTSCCSCGGGH
T ss_pred -CCCCeEEEeCCCCCCCCcc-hh--H----HHHHHHHHHHHHHHHH---hCCCCCcEEEEEcCCcc-cCCCcccCCHhHH
Confidence 5678888876653322111 11 0 1122455566666653 22233567666653321 2223344466889
Q ss_pred HHHHHHHHHHHHhccCCeEEEEeeccc
Q 027816 173 AMNQLTRNLACEWAKDNIRTNSVAPWY 199 (218)
Q Consensus 173 a~~~~~~~l~~e~~~~gv~v~~v~PG~ 199 (218)
++.+|+++++.|++...+++..+.+..
T Consensus 144 ~l~Gl~r~~~~E~P~l~~~~vDl~~~~ 170 (209)
T d2fr1a2 144 ALWGVGRVIALENPAVWGGLVDVPAGS 170 (209)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEEECTTC
T ss_pred hHHHHHHHHHHhCCCceEEEEECCCCC
Confidence 999999999999876667777775553
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=95.60 E-value=0.0072 Score=40.39 Aligned_cols=70 Identities=17% Similarity=0.102 Sum_probs=48.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
|.++|.|. |.+|..++++|. |.+|+++..+++..+... .. .+.++..|.++.+.++++-- .+-+
T Consensus 1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a~i-------~~A~ 64 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKANV-------RGAR 64 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHTTC-------TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHhhh-------hcCc
Confidence 57888875 778999999994 566777888887665443 22 36678899999888665311 2456
Q ss_pred EEEecC
Q 027816 98 ILVNNV 103 (218)
Q Consensus 98 ~vv~~a 103 (218)
.++...
T Consensus 65 ~vi~~~ 70 (129)
T d2fy8a1 65 AVIVNL 70 (129)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 777653
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.46 E-value=0.055 Score=38.86 Aligned_cols=74 Identities=16% Similarity=-0.041 Sum_probs=55.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+.+||=.||+.|. ++..|++.|++|+.++.+++..+.+.+.....+..+..+..|..+..- . .+..
T Consensus 38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~-~~~f 103 (226)
T d1ve3a1 38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------E-DKTF 103 (226)
T ss_dssp CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------C-TTCE
T ss_pred CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc----------c-CcCc
Confidence 4578999999987 566788999999999999988877777665555667777778665321 0 1467
Q ss_pred cEEEecCC
Q 027816 97 NILVNNVG 104 (218)
Q Consensus 97 d~vv~~ag 104 (218)
|+|++...
T Consensus 104 D~I~~~~~ 111 (226)
T d1ve3a1 104 DYVIFIDS 111 (226)
T ss_dssp EEEEEESC
T ss_pred eEEEEecc
Confidence 99888754
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.45 E-value=0.052 Score=39.00 Aligned_cols=71 Identities=20% Similarity=0.203 Sum_probs=52.9
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
+++||+||=.||++|+ ++..++..|+ +|+.++.+++..+...+++. .+..+..|+.+ +
T Consensus 46 dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~~----~~~~~~~D~~~--------------l 104 (197)
T d1ne2a_ 46 NIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSE--------------I 104 (197)
T ss_dssp SSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGG--------------C
T ss_pred CCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHccc----cccEEEEehhh--------------c
Confidence 5789999999999884 3345677886 79999999888776655542 46677788642 2
Q ss_pred CCcccEEEecCCC
Q 027816 93 NGKLNILVNNVGT 105 (218)
Q Consensus 93 ~~~id~vv~~ag~ 105 (218)
.++.|+||.|..+
T Consensus 105 ~~~fD~Vi~NPPf 117 (197)
T d1ne2a_ 105 SGKYDTWIMNPPF 117 (197)
T ss_dssp CCCEEEEEECCCC
T ss_pred CCcceEEEeCccc
Confidence 3678999999765
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.25 E-value=0.045 Score=40.51 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=30.6
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSR 49 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r 49 (218)
.+++++|+|.| .||+|..++..|+..|. ++.+++.
T Consensus 27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~ 62 (247)
T d1jw9b_ 27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDF 62 (247)
T ss_dssp HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence 36778999999 57899999999999997 7888875
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=95.22 E-value=0.12 Score=35.92 Aligned_cols=79 Identities=22% Similarity=0.244 Sum_probs=56.1
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.+.-+|+|.|+ |--|...++-....|++|.+.+.+.+.+++........ +. +-.++.+.+++.+.
T Consensus 30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~---~~---~~~~~~~~l~~~~~-------- 94 (168)
T d1pjca1 30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR---VE---LLYSNSAEIETAVA-------- 94 (168)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG---SE---EEECCHHHHHHHHH--------
T ss_pred CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc---ce---eehhhhhhHHHhhc--------
Confidence 34567888876 56789999999999999999999999888776554332 22 33445666655444
Q ss_pred cccEEEecCCCCCC
Q 027816 95 KLNILVNNVGTNIR 108 (218)
Q Consensus 95 ~id~vv~~ag~~~~ 108 (218)
.-|+||.++-+...
T Consensus 95 ~aDivI~aalipG~ 108 (168)
T d1pjca1 95 EADLLIGAVLVPGR 108 (168)
T ss_dssp TCSEEEECCCCTTS
T ss_pred cCcEEEEeeecCCc
Confidence 34999998876543
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.21 E-value=0.0086 Score=48.56 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=30.0
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
+++.+|||.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D 70 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD 70 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45678999998 6799999999999998 78888753
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=95.05 E-value=0.1 Score=38.91 Aligned_cols=73 Identities=18% Similarity=0.153 Sum_probs=54.0
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
..|++||=.||++|+- +..+++.|++|+.++.++...+.+.++....+..+.....|+ .+ ... . +
T Consensus 119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~---~~-------~~~-~-~ 183 (254)
T d2nxca1 119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSL---EA-------ALP-F-G 183 (254)
T ss_dssp CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCH---HH-------HGG-G-C
T ss_pred CccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccc---cc-------ccc-c-c
Confidence 4688999999999973 345677899999999999999888887766666666666663 11 111 1 5
Q ss_pred cccEEEec
Q 027816 95 KLNILVNN 102 (218)
Q Consensus 95 ~id~vv~~ 102 (218)
+.|+|+.|
T Consensus 184 ~fD~V~an 191 (254)
T d2nxca1 184 PFDLLVAN 191 (254)
T ss_dssp CEEEEEEE
T ss_pred ccchhhhc
Confidence 78999877
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.05 E-value=0.022 Score=39.01 Aligned_cols=42 Identities=19% Similarity=0.230 Sum_probs=35.1
Q ss_pred EEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHh
Q 027816 19 TALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~ 61 (218)
.+.+.|+ |-+|.++++.|++.| ++|.+.+|++++.+...++.
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~ 44 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL 44 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence 4666776 899999999999888 78999999998887776654
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.04 E-value=0.015 Score=41.32 Aligned_cols=38 Identities=34% Similarity=0.355 Sum_probs=33.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.++||++.|.|.+. ||+.+++.+..-|.+|...+|...
T Consensus 39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~ 76 (181)
T d1qp8a1 39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK 76 (181)
T ss_dssp CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence 47899999999765 999999999999999999998753
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=94.89 E-value=0.56 Score=35.83 Aligned_cols=82 Identities=18% Similarity=0.122 Sum_probs=53.7
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.+|++||=.+|..| |.++ +++..+.+|+.++.++..++...+.....+ ..+..+..|.. + +.+...+. +
T Consensus 144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~---~---~~~~~~~~-~ 213 (318)
T d1wxxa2 144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF---D---LLRRLEKE-G 213 (318)
T ss_dssp CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH---H---HHHHHHHT-T
T ss_pred hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH---H---HhhhhHhh-h
Confidence 46888887777654 2233 244456799999999999888877776544 35777777742 2 22223222 2
Q ss_pred CcccEEEecCCCC
Q 027816 94 GKLNILVNNVGTN 106 (218)
Q Consensus 94 ~~id~vv~~ag~~ 106 (218)
.+.|.|+.++...
T Consensus 214 ~~fD~Vi~DpP~~ 226 (318)
T d1wxxa2 214 ERFDLVVLDPPAF 226 (318)
T ss_dssp CCEEEEEECCCCS
T ss_pred cCCCEEEEcCCcc
Confidence 5789999997644
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.88 E-value=0.033 Score=38.56 Aligned_cols=39 Identities=10% Similarity=0.163 Sum_probs=32.7
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCL 58 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 58 (218)
+|-+. |.|-+|..+|++|+++|++|.+.+|+.++.+.+.
T Consensus 3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~ 41 (162)
T d3cuma2 3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV 41 (162)
T ss_dssp EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence 45555 4689999999999999999999999988876554
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.85 E-value=0.4 Score=33.95 Aligned_cols=38 Identities=13% Similarity=0.121 Sum_probs=32.1
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
+|.|. |.|.+|..+|..|++.|++|++.+.+++..+..
T Consensus 2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l 39 (202)
T d1mv8a2 2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI 39 (202)
T ss_dssp EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence 45566 679999999999999999999999998765544
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.79 E-value=0.025 Score=39.78 Aligned_cols=39 Identities=26% Similarity=0.271 Sum_probs=35.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.+++||.++|.|-|.-+|+-++..|+++|+.|..+..+.
T Consensus 25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~ 63 (171)
T d1edza1 25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN 63 (171)
T ss_dssp CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence 478999999999999999999999999999998887653
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=94.72 E-value=0.073 Score=38.71 Aligned_cols=77 Identities=18% Similarity=0.202 Sum_probs=57.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+||..|+++|.-.++..+++ |.+|+.+.++++-.+...+.+...+ ..+..+..|..+. ... . +
T Consensus 78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g---------~~~-~-~ 144 (215)
T d1jg1a_ 78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG---------FPP-K-A 144 (215)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---------CGG-G-C
T ss_pred ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC---------Ccc-c-C
Confidence 46789999999999999888776 4679999999887776666665543 6788888886431 111 1 5
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
+.|.++.+++.
T Consensus 145 pfD~Iiv~~a~ 155 (215)
T d1jg1a_ 145 PYDVIIVTAGA 155 (215)
T ss_dssp CEEEEEECSBB
T ss_pred cceeEEeeccc
Confidence 78999998875
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.52 E-value=0.022 Score=40.70 Aligned_cols=41 Identities=24% Similarity=0.153 Sum_probs=34.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
++|.|.|| |..|.++|..|++.|.+|.+.+|+++..+...+
T Consensus 8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~ 48 (189)
T d1n1ea2 8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE 48 (189)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence 46788886 459999999999999999999999887765543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.41 E-value=0.12 Score=34.24 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=52.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEe-cCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCccc
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTC-SRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKLN 97 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~id 97 (218)
++.|.|++|-.|+.+++.+.++|.+++.. +++.... + ...++ ..|.|.++...+.++.+.++- +-
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~DV---vIDFS~p~~~~~~l~~~~~~~---~p 67 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPDV---VIDFSSPEALPKTVDLCKKYR---AG 67 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCSE---EEECSCGGGHHHHHHHHHHHT---CE
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCCE---EEEecCHHHHHHHHHHHHhcC---CC
Confidence 58999999999999999999999876543 4433210 0 11233 479999999999999988762 45
Q ss_pred EEEecCCC
Q 027816 98 ILVNNVGT 105 (218)
Q Consensus 98 ~vv~~ag~ 105 (218)
+|+-..|+
T Consensus 68 ~ViGTTG~ 75 (128)
T d1vm6a3 68 LVLGTTAL 75 (128)
T ss_dssp EEECCCSC
T ss_pred EEEEcCCC
Confidence 67766563
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=94.25 E-value=0.055 Score=38.85 Aligned_cols=40 Identities=28% Similarity=0.288 Sum_probs=34.5
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
.+++||++.|.| -|.||+.+|+.+..-|.+|+..++....
T Consensus 39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~ 78 (197)
T d1j4aa1 39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNP 78 (197)
T ss_dssp CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred ccccCCeEEEec-ccccchhHHHhHhhhcccccccCccccc
Confidence 368899999998 4789999999999999999999876543
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.23 E-value=0.031 Score=39.22 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=33.1
Q ss_pred CCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 25 GTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 25 a~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
|.|-+|..+|++|++.|++|.+.+|++++.+.+.+.-
T Consensus 8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~ 44 (178)
T d1pgja2 8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN 44 (178)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence 5788999999999999999999999999988776653
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=94.04 E-value=0.085 Score=38.76 Aligned_cols=47 Identities=23% Similarity=0.319 Sum_probs=40.0
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHH
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 60 (218)
.+++||+++|-| .|-+|.++|+.|.+.|++|+..+.+..........
T Consensus 35 ~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~ 81 (230)
T d1leha1 35 DSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE 81 (230)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence 468899999887 57789999999999999999999988877666554
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.03 E-value=0.028 Score=39.70 Aligned_cols=34 Identities=21% Similarity=0.192 Sum_probs=28.6
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
++|.|.|+ |..|.++|..|++.|.+|.+.+|..+
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~ 34 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD 34 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 35667775 88999999999999999999988644
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.95 E-value=0.94 Score=34.55 Aligned_cols=80 Identities=18% Similarity=0.079 Sum_probs=52.7
Q ss_pred CCcEEEEecCC-CchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 16 KGMTALVTGGT-RGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 16 ~~k~vlItGa~-~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
.|++||=.++. |+++.. ++..|+ +|+.++.+++..+...+++...+ ..+..+..|+. +......++
T Consensus 145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~ 214 (324)
T d2as0a2 145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK 214 (324)
T ss_dssp TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence 47888888776 444443 446676 89999999999888777765443 35666666642 223333333
Q ss_pred cCCcccEEEecCCCC
Q 027816 92 FNGKLNILVNNVGTN 106 (218)
Q Consensus 92 ~~~~id~vv~~ag~~ 106 (218)
+.+.|.|+.++...
T Consensus 215 -~~~fD~Vi~DpP~~ 228 (324)
T d2as0a2 215 -GEKFDIVVLDPPAF 228 (324)
T ss_dssp -TCCEEEEEECCCCS
T ss_pred -cCCCCchhcCCccc
Confidence 25789999987643
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.94 E-value=0.19 Score=32.38 Aligned_cols=35 Identities=20% Similarity=0.134 Sum_probs=29.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.|+++|.| +|.+|.++|..|.+.|.+|.++.|.+.
T Consensus 22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence 37888887 479999999999999999999987654
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.86 E-value=0.16 Score=33.28 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=29.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.|+++|.|| |.||.++|..|.+.|.+|.++.|++
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence 378888886 5799999999999999999998864
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.80 E-value=0.2 Score=32.68 Aligned_cols=35 Identities=17% Similarity=0.125 Sum_probs=29.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
+|+++|.| +|.+|.++|..|.++|.+|.++.+...
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence 57877776 589999999999999999999987654
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.79 E-value=0.21 Score=35.12 Aligned_cols=40 Identities=28% Similarity=0.273 Sum_probs=34.4
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
.++.||++.|.| .|.||+++++.+..-|.+|+..++....
T Consensus 40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~ 79 (184)
T d1ygya1 40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP 79 (184)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence 367899998887 6899999999999999999999887654
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.77 E-value=0.14 Score=39.17 Aligned_cols=75 Identities=15% Similarity=0.095 Sum_probs=51.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhh--hCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQ--SKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
.++||+||-.||+.|+ ++..+++.|+ +|++++.++... ...+... ....++..+..|+.+...
T Consensus 33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~-~a~~~~~~~~~~~~i~~~~~~~~~l~~---------- 98 (311)
T d2fyta1 33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILY-QAMDIIRLNKLEDTITLIKGKIEEVHL---------- 98 (311)
T ss_dssp GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHH-HHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHH-HHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence 3579999999999886 5666788897 799999887643 3333322 234568888888766432
Q ss_pred hcCCcccEEEecC
Q 027816 91 KFNGKLNILVNNV 103 (218)
Q Consensus 91 ~~~~~id~vv~~a 103 (218)
. ..+.|+|+...
T Consensus 99 ~-~~~~D~Ivse~ 110 (311)
T d2fyta1 99 P-VEKVDVIISEW 110 (311)
T ss_dssp S-CSCEEEEEECC
T ss_pred c-cccceEEEEee
Confidence 0 14689998753
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.76 E-value=0.062 Score=36.71 Aligned_cols=41 Identities=7% Similarity=0.027 Sum_probs=34.1
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHh
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEW 61 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 61 (218)
+.+. |.|-+|.++++.|.+.|+++.+.+|+.++.++..+++
T Consensus 3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 4455 5688999999999999999999999998877766554
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.74 E-value=0.22 Score=33.29 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=51.9
Q ss_pred EEEEecCCCchHHHHHHHHHhC-CCeEEE-ecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 19 TALVTGGTRGIGQATVEELAGL-GAVVHT-CSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~-G~~V~~-~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+|.|.||+|-.|+.+++...+. +.+++. .++.... .. +.....++ ..|.+.++.+.+.++.+.+. .+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~-~~----~~~~~~Dv---vIDFS~p~~~~~~~~~~~~~---~~ 69 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPL-SL----LTDGNTEV---VIDFTHPDVVMGNLEFLIDN---GI 69 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCT-HH----HHTTTCSE---EEECCCTTTHHHHHHHHHHT---TC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCch-hh----hccccCCE---EEEcccHHHHHHHHHHHHhc---CC
Confidence 5789999999999999998775 456544 4553322 21 11223343 48999999999999998875 34
Q ss_pred cEEEecCCC
Q 027816 97 NILVNNVGT 105 (218)
Q Consensus 97 d~vv~~ag~ 105 (218)
-+|+-..|+
T Consensus 70 ~~ViGTTG~ 78 (135)
T d1yl7a1 70 HAVVGTTGF 78 (135)
T ss_dssp EEEECCCCC
T ss_pred CEEEecccc
Confidence 567655553
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=93.74 E-value=0.061 Score=38.46 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=35.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
..+++||++.|.| -|.||+.+|+.+..-|.+|+..++....
T Consensus 44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~ 84 (193)
T d1mx3a1 44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSD 84 (193)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccc
Confidence 3468899999996 5789999999999999999999886543
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.59 E-value=0.17 Score=34.23 Aligned_cols=36 Identities=22% Similarity=0.224 Sum_probs=28.9
Q ss_pred CcEEEEe-cCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 17 GMTALVT-GGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 17 ~k~vlIt-Ga~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
++.++|. .+++.||.++|..|+++|.+|.++.+...
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 3444544 56799999999999999999999987654
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.47 E-value=0.13 Score=35.65 Aligned_cols=41 Identities=24% Similarity=0.398 Sum_probs=35.9
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
...+.||+++|.|= |-||+.+|+.+...|++|+++..++-.
T Consensus 19 ~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~ 59 (163)
T d1li4a1 19 DVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN 59 (163)
T ss_dssp CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence 35678999999975 589999999999999999999998754
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=93.47 E-value=0.24 Score=35.63 Aligned_cols=79 Identities=19% Similarity=0.157 Sum_probs=55.0
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
.|.+||-.||++|.-..+..++...+.+|+.++.+++..+...+.+... ...+..+..|..+. ... .+
T Consensus 75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~---------~~~--~~ 143 (213)
T d1dl5a1 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG---------VPE--FS 143 (213)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---------CGG--GC
T ss_pred ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc---------ccc--cc
Confidence 3679999999988877766666666669999999998888777776543 34556666664321 111 14
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
..|.|+.+++.
T Consensus 144 ~fD~I~~~~~~ 154 (213)
T d1dl5a1 144 PYDVIFVTVGV 154 (213)
T ss_dssp CEEEEEECSBB
T ss_pred chhhhhhhccH
Confidence 68999988774
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.45 E-value=0.19 Score=32.69 Aligned_cols=35 Identities=17% Similarity=0.089 Sum_probs=29.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.|+++|.| +|.||.++|..|.+.|.+|.++.+.+.
T Consensus 23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEeccc
Confidence 36888887 478999999999999999999887553
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.39 E-value=0.082 Score=35.14 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=55.9
Q ss_pred cCCcEEEEecCC---CchHHHHHHHHHhCC-CeEEEecCChhhHH--HHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHH
Q 027816 15 LKGMTALVTGGT---RGIGQATVEELAGLG-AVVHTCSRNEVELN--KCLKEWQSK--GFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 15 ~~~k~vlItGa~---~giG~~la~~l~~~G-~~V~~~~r~~~~~~--~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
++.|.|.|.||| +..|..+.+.|.+.| .+|+.+.++.+... .....+.+- ..++..+ ....+.+.++++
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi---~vp~~~~~~~~~ 82 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII---VVPKRFVKDTLI 82 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE---CSCHHHHHHHHH
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE---ecChHHhHHHHH
Confidence 466899999999 889999999987766 58988887654321 111122221 1222222 234788888999
Q ss_pred HHHhhcCCcccEEEecCCC
Q 027816 87 EVGSKFNGKLNILVNNVGT 105 (218)
Q Consensus 87 ~~~~~~~~~id~vv~~ag~ 105 (218)
++.+. |.--+++..+|+
T Consensus 83 ~~~~~--g~~~~vi~s~Gf 99 (129)
T d2csua1 83 QCGEK--GVKGVVIITAGF 99 (129)
T ss_dssp HHHHH--TCCEEEECCCSS
T ss_pred HHHHc--CCCEEEEecccc
Confidence 99887 333456666665
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.37 E-value=0.24 Score=32.21 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=29.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.+|+++|.| +|.+|.++|..|.+.|.+|.++.+.+
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence 467888775 57999999999999999999987654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.36 E-value=0.21 Score=32.31 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=29.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.|+++|.| +|.||.++|..|++.|.+|.++.|..
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence 46778776 57999999999999999999998754
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=93.28 E-value=0.48 Score=32.94 Aligned_cols=75 Identities=27% Similarity=0.174 Sum_probs=53.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
.|.+||=.||++| .++.++++.+.+|+.++.+++..+.+.+++...+ ..+..++.|. .+.....
T Consensus 33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda----------~~~~~~~- 98 (186)
T d1l3ia_ 33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDA----------PEALCKI- 98 (186)
T ss_dssp TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCH----------HHHHTTS-
T ss_pred CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECch----------hhccccc-
Confidence 4678999999887 3344566777899999999999888887776553 4688888873 1111222
Q ss_pred CcccEEEecCC
Q 027816 94 GKLNILVNNVG 104 (218)
Q Consensus 94 ~~id~vv~~ag 104 (218)
...|.++.+.+
T Consensus 99 ~~~D~v~~~~~ 109 (186)
T d1l3ia_ 99 PDIDIAVVGGS 109 (186)
T ss_dssp CCEEEEEESCC
T ss_pred CCcCEEEEeCc
Confidence 46899998744
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=93.28 E-value=0.12 Score=36.85 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=33.9
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
.+++||++.|.| -|.||+.+++.+..-|.+|...++....
T Consensus 43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~ 82 (191)
T d1gdha1 43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRAS 82 (191)
T ss_dssp CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred ceecccceEEee-cccchHHHHHHHHhhccccccccccccc
Confidence 467799999887 5789999999999999999999876543
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.19 E-value=1.3 Score=33.67 Aligned_cols=81 Identities=16% Similarity=0.087 Sum_probs=53.6
Q ss_pred CCcEEEEecCCCc-hHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC---CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 16 KGMTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 16 ~~k~vlItGa~~g-iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++++||=..|..| ++. .++..|++|+.++.+....+...++..-. ...+.++..|+ .++++...+.
T Consensus 132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~ 201 (309)
T d2igta1 132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERR 201 (309)
T ss_dssp SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHH
T ss_pred CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhc
Confidence 4677876666554 333 35678999999999999988777765432 23577777764 2334444443
Q ss_pred cCCcccEEEecCCCCC
Q 027816 92 FNGKLNILVNNVGTNI 107 (218)
Q Consensus 92 ~~~~id~vv~~ag~~~ 107 (218)
+.+.|+||+....+.
T Consensus 202 -~~~fD~IilDPP~f~ 216 (309)
T d2igta1 202 -GSTYDIILTDPPKFG 216 (309)
T ss_dssp -TCCBSEEEECCCSEE
T ss_pred -CCCCCEEEECCCccc
Confidence 257899999976543
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=93.01 E-value=0.34 Score=31.25 Aligned_cols=35 Identities=26% Similarity=0.094 Sum_probs=29.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
..+.++|.| +|.||.++|..|++.|.+|.++.+..
T Consensus 21 ~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeec
Confidence 347888887 57999999999999999998887654
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=92.92 E-value=0.22 Score=35.16 Aligned_cols=40 Identities=23% Similarity=0.347 Sum_probs=34.0
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
..+++++++.|.| .|.||+++++.+..-|.+|...++...
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d2naca1 39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRL 78 (188)
T ss_dssp CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCC
T ss_pred ceeccccceeecc-ccccchhhhhhhhccCceEEEEeeccc
Confidence 3467899999887 578999999999999999999997543
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.89 E-value=0.26 Score=37.31 Aligned_cols=23 Identities=22% Similarity=0.141 Sum_probs=20.0
Q ss_pred CchHHHHHHHHHhCCCeEEEecC
Q 027816 27 RGIGQATVEELAGLGAVVHTCSR 49 (218)
Q Consensus 27 ~giG~~la~~l~~~G~~V~~~~r 49 (218)
|..|.++|+++..+|++|+++.+
T Consensus 46 Gk~G~alA~~~~~~Ga~V~li~g 68 (290)
T d1p9oa_ 46 GRRGATSAEAFLAAGYGVLFLYR 68 (290)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHHHcCCEEEEEec
Confidence 46799999999999999988754
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.85 E-value=0.55 Score=31.31 Aligned_cols=86 Identities=12% Similarity=0.032 Sum_probs=57.7
Q ss_pred CCcEEEEecCC---CchHHHHHHHHHhCCCeEEEecCChhhHH--HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHh
Q 027816 16 KGMTALVTGGT---RGIGQATVEELAGLGAVVHTCSRNEVELN--KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGS 90 (218)
Q Consensus 16 ~~k~vlItGa~---~giG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 90 (218)
+.|.|.|.|+| +..|..+++.|.+.|++|+.+....+... .....+.+-...+..... ....+.+.++++++.+
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~ 96 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK 96 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence 46899999999 67999999999999999999987644321 112222222222222222 3458888889999887
Q ss_pred hcCCcccEEEecCCC
Q 027816 91 KFNGKLNILVNNVGT 105 (218)
Q Consensus 91 ~~~~~id~vv~~ag~ 105 (218)
. .+..++...|.
T Consensus 97 ~---g~k~v~~~~G~ 108 (139)
T d2d59a1 97 K---GAKVVWFQYNT 108 (139)
T ss_dssp H---TCSEEEECTTC
T ss_pred h---CCCEEEEeccc
Confidence 6 25677777664
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=92.84 E-value=0.12 Score=35.12 Aligned_cols=37 Identities=16% Similarity=0.076 Sum_probs=29.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNK 56 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~ 56 (218)
+|-|.| .|-+|..+|+.|+++|++|+..+++.++...
T Consensus 2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~ 38 (152)
T d1i36a2 2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTI 38 (152)
T ss_dssp EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence 355565 5999999999999999999998877665443
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=92.73 E-value=0.25 Score=31.73 Aligned_cols=34 Identities=26% Similarity=0.263 Sum_probs=29.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
|+++|.| +|.+|.++|..|.+.|.+|.++.|.+.
T Consensus 22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence 6777776 589999999999999999999988653
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=92.67 E-value=0.88 Score=30.48 Aligned_cols=77 Identities=12% Similarity=0.071 Sum_probs=52.5
Q ss_pred ccCCcEEEEecCCCc-hHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGTRG-IGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa~~g-iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.++|++||=.||++| +|. +++.+|+ +|+.++.+.+..+...+.+... ..++..++.|.. +.++.
T Consensus 12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~------~~l~~-- 79 (152)
T d2esra1 12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAE------RAIDC-- 79 (152)
T ss_dssp CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHH------HHHHH--
T ss_pred hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccccc------ccccc--
Confidence 467999988887766 444 4567887 8999999999887776666533 345777887732 12222
Q ss_pred hhcCCcccEEEecCC
Q 027816 90 SKFNGKLNILVNNVG 104 (218)
Q Consensus 90 ~~~~~~id~vv~~ag 104 (218)
...+.|+++..+.
T Consensus 80 --~~~~fDiIf~DPP 92 (152)
T d2esra1 80 --LTGRFDLVFLDPP 92 (152)
T ss_dssp --BCSCEEEEEECCS
T ss_pred --cccccceeEechh
Confidence 2257899998754
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=92.65 E-value=0.33 Score=34.07 Aligned_cols=76 Identities=16% Similarity=0.145 Sum_probs=53.2
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
+++.+||=.||+.|. .+..|+++|++|+.++.+++.++...+.....+ ..+.....|+.+..- .
T Consensus 29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~------------~ 93 (198)
T d2i6ga1 29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF------------D 93 (198)
T ss_dssp SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC------------C
T ss_pred CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc------------c
Confidence 345689999997654 556788999999999999998877665554443 346666777654331 2
Q ss_pred CcccEEEecCCC
Q 027816 94 GKLNILVNNVGT 105 (218)
Q Consensus 94 ~~id~vv~~ag~ 105 (218)
+..|+|+.+.-.
T Consensus 94 ~~fD~I~~~~~~ 105 (198)
T d2i6ga1 94 GEYDFILSTVVM 105 (198)
T ss_dssp CCEEEEEEESCG
T ss_pred ccccEEEEeeee
Confidence 467999876543
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.61 E-value=0.36 Score=35.00 Aligned_cols=79 Identities=15% Similarity=0.099 Sum_probs=57.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC------CCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK------GFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
.|.+||-.|+++|.-.++..++.....+|+.++++++..+...+.+... ...+.....|..+.. .
T Consensus 76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~---------~ 146 (224)
T d1i1na_ 76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY---------A 146 (224)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC---------G
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc---------c
Confidence 4679999999999999988888887789999999998877766665422 234566666743211 1
Q ss_pred hhcCCcccEEEecCCC
Q 027816 90 SKFNGKLNILVNNVGT 105 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~ 105 (218)
.. ++.|.|+.+++.
T Consensus 147 -~~-~~fD~I~~~~~~ 160 (224)
T d1i1na_ 147 -EE-APYDAIHVGAAA 160 (224)
T ss_dssp -GG-CCEEEEEECSBB
T ss_pred -hh-hhhhhhhhhcch
Confidence 11 478999999875
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=92.30 E-value=0.55 Score=32.89 Aligned_cols=41 Identities=22% Similarity=0.192 Sum_probs=34.0
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLK 59 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 59 (218)
-.|+|.|| |-.|...++-....|++|.+.+.+.+.+++..+
T Consensus 30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~ 70 (183)
T d1l7da1 30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES 70 (183)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence 46788875 567889999999999999999999988776654
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=92.21 E-value=0.29 Score=35.63 Aligned_cols=75 Identities=19% Similarity=0.006 Sum_probs=52.6
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
.|.+||-.|+++|.-.++ |++.+.+|+.+.++++..+...+.+. ....+..+..|..+. ..+ . ++
T Consensus 70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g---------~~~-~-~p 134 (224)
T d1vbfa_ 70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG---------YEE-E-KP 134 (224)
T ss_dssp TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC---------CGG-G-CC
T ss_pred ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc---------chh-h-hh
Confidence 457899999999977665 44456789999999887766655543 345778888886431 111 1 57
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
.|.++.+++.
T Consensus 135 fD~Iiv~~a~ 144 (224)
T d1vbfa_ 135 YDRVVVWATA 144 (224)
T ss_dssp EEEEEESSBB
T ss_pred HHHHHhhcch
Confidence 8999988774
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=92.14 E-value=0.33 Score=31.02 Aligned_cols=35 Identities=26% Similarity=0.172 Sum_probs=29.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.|+++|.| +|.+|.++|..|.+.|.+|.++.+.+.
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence 46777775 689999999999999999999877543
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=91.90 E-value=0.48 Score=30.33 Aligned_cols=36 Identities=19% Similarity=0.092 Sum_probs=30.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.+|.++|.| +|.||.++|..|.+.|.+|.++.|.+.
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence 468888776 589999999999999999999987644
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=91.83 E-value=0.099 Score=38.61 Aligned_cols=34 Identities=21% Similarity=0.106 Sum_probs=27.8
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
+|+|+|.|| |.=|...|.+|+++|++|.++.++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 588888875 5568888999999999999997643
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.82 E-value=0.13 Score=33.61 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=29.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
+|.++|.| +|.+|.++|..|.+.|.+|.++.|++.
T Consensus 32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence 36777766 589999999999999999999987643
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.72 E-value=0.087 Score=43.64 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=29.8
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSR 49 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r 49 (218)
.+++.+|+|.|+ ||+|.++++.|+-.|. ++.+++.
T Consensus 22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~ 57 (529)
T d1yova1 22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG 57 (529)
T ss_dssp HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence 356779999997 7899999999999997 7888764
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=91.72 E-value=0.72 Score=31.22 Aligned_cols=44 Identities=18% Similarity=0.161 Sum_probs=32.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC--CeEEEe--cCChhhHHHHHHHh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG--AVVHTC--SRNEVELNKCLKEW 61 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G--~~V~~~--~r~~~~~~~~~~~~ 61 (218)
|++.|.|+||.||.....-+.++- ++|+.. .++.+.+.+...+.
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f 49 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF 49 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence 579999999999999888777764 565543 46666666665554
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=91.69 E-value=0.14 Score=37.11 Aligned_cols=34 Identities=29% Similarity=0.291 Sum_probs=28.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.|+|+|.|| |-.|...|.+|+++|++|.++.|..
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 357888875 6789999999999999999998753
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=91.67 E-value=0.78 Score=31.51 Aligned_cols=80 Identities=9% Similarity=-0.023 Sum_probs=48.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+|++||=.||++|. +.-+++.+|++|+.++.+++..+.+.+.+...+........ +.+.. ....... +.+
T Consensus 41 ~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~---~~d~~---~~~~~~~-~~~ 110 (171)
T d1ws6a1 41 RRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL---PVEVF---LPEAKAQ-GER 110 (171)
T ss_dssp TCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS---CHHHH---HHHHHHT-TCC
T ss_pred CCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeee---ehhcc---ccccccc-CCc
Confidence 57777777776653 33456788999999999999888777666543332222222 23332 2222222 246
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
.|+|+.++.+
T Consensus 111 fD~If~DPPY 120 (171)
T d1ws6a1 111 FTVAFMAPPY 120 (171)
T ss_dssp EEEEEECCCT
T ss_pred cceeEEcccc
Confidence 8999988643
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=91.58 E-value=0.3 Score=34.55 Aligned_cols=82 Identities=17% Similarity=0.150 Sum_probs=59.9
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+..+=+|-|+||...++...+ . +.+|++++++++.++...+.+......+..+..+.++... .+.... . ..+
T Consensus 25 ~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~---~~~~~~--~-~~v 96 (192)
T d1m6ya2 25 KIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF---LLKTLG--I-EKV 96 (192)
T ss_dssp CEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH---HHHHTT--C-SCE
T ss_pred CEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH---HHHHcC--C-CCc
Confidence 344556778888888888776 3 4689999999999988888776656678888888765444 233221 1 478
Q ss_pred cEEEecCCCC
Q 027816 97 NILVNNVGTN 106 (218)
Q Consensus 97 d~vv~~ag~~ 106 (218)
|.++...|+.
T Consensus 97 dgIl~DlGvS 106 (192)
T d1m6ya2 97 DGILMDLGVS 106 (192)
T ss_dssp EEEEEECSCC
T ss_pred ceeeeccchh
Confidence 9999998874
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=91.39 E-value=0.076 Score=37.83 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=27.4
Q ss_pred cEEEEecCCCchHHH-----HHHHHHhCCCeEEEec
Q 027816 18 MTALVTGGTRGIGQA-----TVEELAGLGAVVHTCS 48 (218)
Q Consensus 18 k~vlItGa~~giG~~-----la~~l~~~G~~V~~~~ 48 (218)
|+++|||.+.|.|+- +|+.|+++|++|.+++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 789999999898874 7889999999998876
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.35 E-value=0.48 Score=30.70 Aligned_cols=32 Identities=28% Similarity=0.310 Sum_probs=27.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCCeEEEecCC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~ 50 (218)
|+++|.| +|.||.++|..|.+.|.+|.++.|+
T Consensus 21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 5677776 5799999999999999999888775
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=91.34 E-value=0.38 Score=31.66 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=52.1
Q ss_pred CCcEEEEecCCC----------chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHH
Q 027816 16 KGMTALVTGGTR----------GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLI 85 (218)
Q Consensus 16 ~~k~vlItGa~~----------giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~ 85 (218)
.-|.|||.|++. .-+.+.++.|-+.|++++++..|++....-. +...++.+.+. ..+++.+++
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYfePl---t~e~v~~Ii 78 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYIEPI---HWEVVRKII 78 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEECSCC---CHHHHHHHH
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeeeecC---CHHHHHHHH
Confidence 347899999863 3477899999999999999999887643211 11234443333 477776666
Q ss_pred HHHHhhcCCcccEEEecCC
Q 027816 86 QEVGSKFNGKLNILVNNVG 104 (218)
Q Consensus 86 ~~~~~~~~~~id~vv~~ag 104 (218)
+.- ++|.++...|
T Consensus 79 ~~E------~pd~il~~~G 91 (127)
T d1a9xa3 79 EKE------RPDAVLPTMG 91 (127)
T ss_dssp HHH------CCSEEECSSS
T ss_pred HHh------CcCCeEEEee
Confidence 643 6899987766
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.23 E-value=0.099 Score=36.52 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=28.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.+|+|+|.|| |..|...|..|+++|+ .|.+..++
T Consensus 3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~ 37 (196)
T d1gtea4 3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQ 37 (196)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEec
Confidence 4678888875 7889999999999998 48888765
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.00 E-value=0.39 Score=36.60 Aligned_cols=74 Identities=19% Similarity=0.144 Sum_probs=49.6
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhh--CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++||+||-.||+.|+ ++..+++.|+ +|+.++.++. .....+.... ...++..+..|+.+.+. .
T Consensus 32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~ 97 (316)
T d1oria_ 32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P 97 (316)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence 478999999999886 4566778887 6999987754 3333333322 23458888888766431 1
Q ss_pred cCCcccEEEecC
Q 027816 92 FNGKLNILVNNV 103 (218)
Q Consensus 92 ~~~~id~vv~~a 103 (218)
..+.|+|+...
T Consensus 98 -~~~~D~ivs~~ 108 (316)
T d1oria_ 98 -VEKVDIIISEW 108 (316)
T ss_dssp -SSCEEEEEECC
T ss_pred -cceeEEEeeee
Confidence 14678888763
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=90.90 E-value=1.2 Score=29.84 Aligned_cols=80 Identities=10% Similarity=-0.003 Sum_probs=48.9
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhh------CCCeEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQS------KGFVVSGSVCDAASPDQREKLIQEVGSKFN 93 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~ 93 (218)
|-+.|. |-+|..+|++|++.|+.+ ...|+.++.....++... .-.....+...+.+.+.+....+.+.+..
T Consensus 3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~- 79 (156)
T d2cvza2 3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL- 79 (156)
T ss_dssp EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC-
T ss_pred EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc-
Confidence 445565 889999999999988765 567777766555554321 11122233344666777777777776654
Q ss_pred CcccEEEec
Q 027816 94 GKLNILVNN 102 (218)
Q Consensus 94 ~~id~vv~~ 102 (218)
.+-..++.+
T Consensus 80 ~~~~~iid~ 88 (156)
T d2cvza2 80 REGTYWVDA 88 (156)
T ss_dssp CTTEEEEEC
T ss_pred ccccccccc
Confidence 233444444
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: YxiM C-terminal domain-like domain: Hypothetical protein YxiM species: Bacillus subtilis [TaxId: 1423]
Probab=90.88 E-value=0.87 Score=31.72 Aligned_cols=82 Identities=15% Similarity=0.137 Sum_probs=44.8
Q ss_pred cCCcEEEEecCCC-------------chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHH
Q 027816 15 LKGMTALVTGGTR-------------GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQR 81 (218)
Q Consensus 15 ~~~k~vlItGa~~-------------giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 81 (218)
+++|++++.|=|- |.+..++++|-..+.+|+-.+.+-.........
T Consensus 1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~--------------------- 59 (208)
T d2o14a2 1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND--------------------- 59 (208)
T ss_dssp CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence 3688999999883 355566666655677776555544332221110
Q ss_pred HHHHHHHHhhcCCcccEEEecCCCCCCCCCCCCCHHHH
Q 027816 82 EKLIQEVGSKFNGKLNILVNNVGTNIRKPTIEYSAEEY 119 (218)
Q Consensus 82 ~~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~ 119 (218)
..+.+..... .+.|+|+...|..........+.+.+
T Consensus 60 -~~~~~~~~~~-~~~D~vvi~~G~ND~~~~~~~~~~~~ 95 (208)
T d2o14a2 60 -GQLEAILKYI-KPGDYFMLQLGINDTNPKHKESEAEF 95 (208)
T ss_dssp -SHHHHHHTTC-CTTCEEEEECCTGGGCGGGCCCHHHH
T ss_pred -hhHHHHHHhc-CCCCEEEEEcCCCcccccccccHHHH
Confidence 0122333333 35699999988765332223444443
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=90.81 E-value=0.4 Score=31.10 Aligned_cols=35 Identities=17% Similarity=0.113 Sum_probs=30.1
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.|.++|.| +|.||.++|..|.+.|.+|.++.|++.
T Consensus 25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence 46888887 579999999999999999999988654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=90.80 E-value=0.16 Score=37.59 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=30.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS 48 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~ 48 (218)
+++||+|+|-| .|-.|.++|+.|.+.|++|+.++
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 68899999997 78899999999999999987765
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=90.77 E-value=0.78 Score=32.03 Aligned_cols=75 Identities=15% Similarity=0.052 Sum_probs=53.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC---CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK---GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||=.||+.| .++..+++.+.+|.+++.++...+...+.+... ...+.....|..+.-.
T Consensus 52 ~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~~------------ 116 (194)
T d1dusa_ 52 KDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK------------ 116 (194)
T ss_dssp TTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT------------
T ss_pred CCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhhc------------
Confidence 5789999999887 344567777889999999988877766655432 3467888888653211
Q ss_pred CCcccEEEecCCC
Q 027816 93 NGKLNILVNNVGT 105 (218)
Q Consensus 93 ~~~id~vv~~ag~ 105 (218)
++..|.|+.+...
T Consensus 117 ~~~fD~Ii~~~p~ 129 (194)
T d1dusa_ 117 DRKYNKIITNPPI 129 (194)
T ss_dssp TSCEEEEEECCCS
T ss_pred cCCceEEEEcccE
Confidence 1468999988543
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=90.72 E-value=0.12 Score=38.53 Aligned_cols=36 Identities=31% Similarity=0.320 Sum_probs=31.5
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS 48 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~ 48 (218)
..+++||++.|-| .|-+|..+++.|.+.|++|+.++
T Consensus 31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 3478999999998 68899999999999999987764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=90.68 E-value=0.22 Score=34.89 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=31.4
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
..+.|+|+|.|| |.-|.+.|..|+++|++|.+..+..
T Consensus 40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence 345789999985 6789999999999999999998754
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=90.63 E-value=0.11 Score=36.42 Aligned_cols=32 Identities=22% Similarity=0.101 Sum_probs=26.1
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
+|-|.||||..|.++++.|.++-. ++..+..+
T Consensus 3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 688999999999999999999875 55555433
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.62 E-value=0.67 Score=30.08 Aligned_cols=76 Identities=11% Similarity=-0.031 Sum_probs=50.3
Q ss_pred CcEEEEecCCC----------chHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHH
Q 027816 17 GMTALVTGGTR----------GIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQ 86 (218)
Q Consensus 17 ~k~vlItGa~~----------giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 86 (218)
.|.|||.|++. .-+.+.++.|-+.|++++++..|++....-. +...++.+.+ -..+.+.++++
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYfep---lt~e~v~~Ii~ 76 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYFEP---VTLEDVLEIVR 76 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEECCC---CSHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEEcc---CCHHHHHHHHH
Confidence 47899999863 3477899999999999999999887543110 1123344333 34666666555
Q ss_pred HHHhhcCCcccEEEecCCC
Q 027816 87 EVGSKFNGKLNILVNNVGT 105 (218)
Q Consensus 87 ~~~~~~~~~id~vv~~ag~ 105 (218)
.- ++|.++...|.
T Consensus 77 ~E------~p~~ii~~~GG 89 (121)
T d1a9xa4 77 IE------KPKGVIVQYGG 89 (121)
T ss_dssp HH------CCSEEECSSST
T ss_pred Hh------CCCEEEeehhh
Confidence 43 67888877663
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=90.61 E-value=0.17 Score=36.22 Aligned_cols=39 Identities=28% Similarity=0.303 Sum_probs=33.7
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.++.||++.|.|. |.||+.+++.+..-|.+|+..++...
T Consensus 41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 79 (199)
T d1dxya1 41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM 79 (199)
T ss_dssp CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence 4678999999875 67999999999999999999988643
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=90.55 E-value=0.23 Score=32.91 Aligned_cols=36 Identities=14% Similarity=0.020 Sum_probs=30.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.+|+++|.| +|.+|.++|..|.+.|.+|.++.+...
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence 367888886 589999999999999999999987544
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=90.39 E-value=0.54 Score=34.00 Aligned_cols=79 Identities=10% Similarity=-0.005 Sum_probs=54.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHh-CC----CeEEEecCChhhHHHHHHHhhh------CCCeEEEEEeeCCCHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAG-LG----AVVHTCSRNEVELNKCLKEWQS------KGFVVSGSVCDAASPDQREKL 84 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~-~G----~~V~~~~r~~~~~~~~~~~~~~------~~~~v~~~~~D~~~~~~~~~~ 84 (218)
.|.+||..|+++|.-.++..+++. .| .+|+.+.++++..+...+.+.. ....+..+..|..+.
T Consensus 80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------ 153 (223)
T d1r18a_ 80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------ 153 (223)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence 467999999999998887777764 44 4899999988876655444321 123577777885421
Q ss_pred HHHHHhhcCCcccEEEecCCC
Q 027816 85 IQEVGSKFNGKLNILVNNVGT 105 (218)
Q Consensus 85 ~~~~~~~~~~~id~vv~~ag~ 105 (218)
.. .. ++.|.|+.+++.
T Consensus 154 ---~~-~~-~~fD~Iiv~~a~ 169 (223)
T d1r18a_ 154 ---YP-PN-APYNAIHVGAAA 169 (223)
T ss_dssp ---CG-GG-CSEEEEEECSCB
T ss_pred ---cc-cc-cceeeEEEEeec
Confidence 11 11 578999998875
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=90.08 E-value=0.85 Score=34.00 Aligned_cols=77 Identities=16% Similarity=0.124 Sum_probs=51.0
Q ss_pred cEEEEecCCCch-HHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC--CeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 18 MTALVTGGTRGI-GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG--FVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 18 k~vlItGa~~gi-G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
++++-.|+++|+ +..++ + ...++|++++.+++.++-+.++....+ ..+.....|..+. ..... +
T Consensus 112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~-~ 178 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF-A 178 (271)
T ss_dssp CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT-T
T ss_pred cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc-C
Confidence 456666666665 44443 3 356799999999999887777765433 3566666775432 22233 5
Q ss_pred cccEEEecCCCCC
Q 027816 95 KLNILVNNVGTNI 107 (218)
Q Consensus 95 ~id~vv~~ag~~~ 107 (218)
++|++|.|..+.+
T Consensus 179 ~fDlIVsNPPYI~ 191 (271)
T d1nv8a_ 179 SIEMILSNPPYVK 191 (271)
T ss_dssp TCCEEEECCCCBC
T ss_pred cccEEEEcccccC
Confidence 7899999998764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=89.88 E-value=0.16 Score=37.48 Aligned_cols=31 Identities=26% Similarity=0.131 Sum_probs=26.7
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
|+|.| +|-.|.++|++|+++|.+|+++.+..
T Consensus 7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 67776 57889999999999999999998754
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=89.87 E-value=0.12 Score=32.96 Aligned_cols=39 Identities=21% Similarity=0.098 Sum_probs=30.8
Q ss_pred CccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 13 WSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 13 ~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.+++||+|+|.|++ -=|..+|..|+..+.+++...|..+
T Consensus 28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence 46899999999976 5678899999998887766665543
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=89.67 E-value=0.25 Score=35.97 Aligned_cols=35 Identities=23% Similarity=0.193 Sum_probs=28.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
+.++|+|.|| |--|..+|..|+++|.+|++..|+.
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4567888875 5668888889999999999998754
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=89.64 E-value=0.19 Score=38.04 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=23.2
Q ss_pred cEEEEecCCCchHH-----HHHHHHHhCCCeEEEecCC
Q 027816 18 MTALVTGGTRGIGQ-----ATVEELAGLGAVVHTCSRN 50 (218)
Q Consensus 18 k~vlItGa~~giG~-----~la~~l~~~G~~V~~~~r~ 50 (218)
|+|+|++|+.| |- +|+++|.++|++|..++..
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 56777766544 54 5899999999998876543
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=89.57 E-value=0.68 Score=30.09 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=29.3
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.|.++|.| +|.||.++|..|.+.|.+|.++.+.+
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence 47888887 58999999999999999999997654
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.55 E-value=0.24 Score=37.57 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=30.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEec
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCS 48 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~ 48 (218)
+++||+|+|-|- |-+|.++|+.|.+.|++|+.++
T Consensus 33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 688999999886 7899999999999999988775
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.51 E-value=0.23 Score=33.47 Aligned_cols=34 Identities=26% Similarity=0.336 Sum_probs=26.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC---CeEEEecCCh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG---AVVHTCSRNE 51 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G---~~V~~~~r~~ 51 (218)
..|-|.||||..|.++++.|.+++ .++..++.+.
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~ 39 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE 39 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence 468899999999999999998765 3666655444
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=89.42 E-value=0.2 Score=35.85 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=31.3
Q ss_pred CCCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC
Q 027816 11 SRWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (218)
Q Consensus 11 ~~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~ 50 (218)
+..+++||+|+|.|++. -|-.+|.++++.+++++.+.|.
T Consensus 26 ~~~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~ 64 (235)
T d1w4xa2 26 EPVDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRT 64 (235)
T ss_dssp SCCCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESS
T ss_pred CCCCCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccc
Confidence 34568999999998775 3889999999999987666554
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.37 E-value=0.34 Score=34.99 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=30.5
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.-.+|+|+|.|| |.-|...|.+|+++|++|.+..++.
T Consensus 46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence 346789999986 5668999999999999999987643
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=89.35 E-value=1.1 Score=28.58 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=26.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHh---CCCeEEEecCCh
Q 027816 17 GMTALVTGGTRGIGQATVEELAG---LGAVVHTCSRNE 51 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~---~G~~V~~~~r~~ 51 (218)
.|+++|.|| |.+|.++|..|.+ +|.+|.++.|.+
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 478888887 8999999976654 456788887654
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=88.92 E-value=0.28 Score=33.18 Aligned_cols=35 Identities=9% Similarity=0.003 Sum_probs=26.7
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC----CeEEEecCChh
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG----AVVHTCSRNEV 52 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G----~~V~~~~r~~~ 52 (218)
|.|-|.||||..|+.+.+.|+++. .++.+.+++..
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 467889999999999999888764 25666665543
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=88.61 E-value=0.27 Score=37.51 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=28.2
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
++|.|+|.|| |--|..+|.+|++.|.+|.+..++.
T Consensus 1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence 3688898875 4568889999999999999886654
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.60 E-value=0.17 Score=38.17 Aligned_cols=43 Identities=21% Similarity=0.132 Sum_probs=34.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQ 62 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 62 (218)
+++||=.||+.|. ++..|+++|++|+.++.+++-++.+.+...
T Consensus 57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~ 99 (292)
T d1xvaa_ 57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERW 99 (292)
T ss_dssp CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHH
Confidence 5789999999886 455678889999999999988776655543
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=88.47 E-value=0.27 Score=33.34 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=28.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC--eEEEecCCh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA--VVHTCSRNE 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~--~V~~~~r~~ 51 (218)
.||+|+|.|| |..|..+|..|.+.+. +|+++.+++
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4899999986 5779999999999884 788887654
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=88.40 E-value=0.19 Score=37.70 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=29.1
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
..|+|+|.||+ --|...|.+|+++|++|.+..++.
T Consensus 29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45789999864 559999999999999999997654
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=88.01 E-value=2.6 Score=31.60 Aligned_cols=75 Identities=15% Similarity=0.264 Sum_probs=44.4
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhh---h--CCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQ---S--KGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~---~--~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
..|+|||.|+++| .+++++++.. .+|.++..+++-.+-..+.+. . ...++..+..|. ++-+
T Consensus 89 ~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da---------~~~l 156 (295)
T d1inla_ 89 NPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANG---------AEYV 156 (295)
T ss_dssp SCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH---------HHHG
T ss_pred CCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhH---------HHHH
Confidence 3579999999887 4567777753 479999988876554333221 1 134556555552 1112
Q ss_pred HhhcCCcccEEEecC
Q 027816 89 GSKFNGKLNILVNNV 103 (218)
Q Consensus 89 ~~~~~~~id~vv~~a 103 (218)
. ....+.|+|+.-.
T Consensus 157 ~-~~~~~yDvIi~D~ 170 (295)
T d1inla_ 157 R-KFKNEFDVIIIDS 170 (295)
T ss_dssp G-GCSSCEEEEEEEC
T ss_pred h-cCCCCCCEEEEcC
Confidence 2 2224678777654
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=87.99 E-value=1.1 Score=31.62 Aligned_cols=75 Identities=13% Similarity=0.008 Sum_probs=52.6
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
+++||=.||+.|+-. ..++++|++|+.++.+++-.+.+.+.+... ...+.+...|..+..- . .+.
T Consensus 16 ~~rVLDiGcG~G~~~---~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~~-----~------~~~ 81 (231)
T d1vl5a_ 16 NEEVLDVATGGGHVA---NAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPF-----T------DER 81 (231)
T ss_dssp CCEEEEETCTTCHHH---HHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCS-----C------TTC
T ss_pred cCEEEEecccCcHHH---HHHHHhCCEEEEEECCHHHHhhhhhcccccccccccccccccccccc-----c------ccc
Confidence 578999999988653 557888999999999998777665555433 3567778888765420 0 146
Q ss_pred ccEEEecCCC
Q 027816 96 LNILVNNVGT 105 (218)
Q Consensus 96 id~vv~~ag~ 105 (218)
.|+|+.....
T Consensus 82 fD~v~~~~~l 91 (231)
T d1vl5a_ 82 FHIVTCRIAA 91 (231)
T ss_dssp EEEEEEESCG
T ss_pred cccccccccc
Confidence 7888877654
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=87.97 E-value=0.25 Score=37.01 Aligned_cols=31 Identities=16% Similarity=0.267 Sum_probs=25.7
Q ss_pred EEEEecCCCchHHHHHHHHHhCCC-eEEEecCC
Q 027816 19 TALVTGGTRGIGQATVEELAGLGA-VVHTCSRN 50 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~ 50 (218)
.|+|.|| |-+|.++|++|+++|. +|+++.++
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 4677775 5899999999999997 59888775
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.96 E-value=0.27 Score=34.86 Aligned_cols=31 Identities=19% Similarity=0.079 Sum_probs=26.1
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
|+|.| +|--|...|.+|+++|.+|.++.++.
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 67777 56779999999999999999988754
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.91 E-value=2.3 Score=30.25 Aligned_cols=77 Identities=12% Similarity=0.013 Sum_probs=52.3
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCC-CeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc-
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLG-AVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF- 92 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~- 92 (218)
..|++||=.|++.|+ .+..+++++ .+|++++.+++.++.+.+........+..+..|. ......+
T Consensus 52 ~~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 118 (229)
T d1zx0a1 52 SKGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLW----------EDVAPTLP 118 (229)
T ss_dssp TTCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCH----------HHHGGGSC
T ss_pred cCCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccc----------cccccccc
Confidence 357899999999885 445677765 6899999999888877777666666666666551 1122211
Q ss_pred CCcccEEEecCC
Q 027816 93 NGKLNILVNNVG 104 (218)
Q Consensus 93 ~~~id~vv~~ag 104 (218)
.+..|.++..+-
T Consensus 119 ~~~fD~i~fD~~ 130 (229)
T d1zx0a1 119 DGHFDGILYDTY 130 (229)
T ss_dssp TTCEEEEEECCC
T ss_pred cccccceeeccc
Confidence 246788886654
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.90 E-value=1 Score=34.25 Aligned_cols=75 Identities=15% Similarity=0.006 Sum_probs=49.4
Q ss_pred cCCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhh--CCCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 15 LKGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 15 ~~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
++||+||-.||+.|+ ++..+++.|+ +|++++.++. ...+.+.... ....+..+..|+.+.+-
T Consensus 37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------- 101 (328)
T d1g6q1_ 37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLEDVHL----------- 101 (328)
T ss_dssp HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC-----------
T ss_pred CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhhccC-----------
Confidence 478999999999885 4556778897 7888887753 3333333322 24567888888765421
Q ss_pred cCCcccEEEecCC
Q 027816 92 FNGKLNILVNNVG 104 (218)
Q Consensus 92 ~~~~id~vv~~ag 104 (218)
.....|+|+...-
T Consensus 102 ~~~~~D~i~se~~ 114 (328)
T d1g6q1_ 102 PFPKVDIIISEWM 114 (328)
T ss_dssp SSSCEEEEEECCC
T ss_pred cccceeEEEEEec
Confidence 0146788887643
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=87.87 E-value=0.23 Score=36.44 Aligned_cols=32 Identities=22% Similarity=0.201 Sum_probs=26.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCCh
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNE 51 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~ 51 (218)
.|+|.|| |--|...|.+|+++|++|.++.++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 5788887 6678999999999999999987643
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=87.85 E-value=0.51 Score=31.97 Aligned_cols=45 Identities=27% Similarity=0.244 Sum_probs=32.7
Q ss_pred CcEEEEecCCCchHHHHHHHHHhC--CCeEEEe--cCChhhHHHHHHHh
Q 027816 17 GMTALVTGGTRGIGQATVEELAGL--GAVVHTC--SRNEVELNKCLKEW 61 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~--G~~V~~~--~r~~~~~~~~~~~~ 61 (218)
.|++.|.|+||.||.....-+.+. .++|+.+ .++.+.+.+...+.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef 50 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRT 50 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhh
Confidence 489999999999999988877765 3666554 45666665555554
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.84 E-value=2.2 Score=27.17 Aligned_cols=83 Identities=19% Similarity=0.202 Sum_probs=52.4
Q ss_pred cEEEEecCC---CchHHHHHHHHHhCCCeEEEecCChhhHH--HHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 18 MTALVTGGT---RGIGQATVEELAGLGAVVHTCSRNEVELN--KCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 18 k~vlItGa~---~giG~~la~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
|.|.|.|+| +-.|..+.+.|.+.|++|+.+.++.+... .....+.+-...+.... =....+.+.++++++.+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vv-i~vp~~~~~~~l~~~~~~- 79 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIV-FVVPPKVGLQVAKEAVEA- 79 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEE-ECSCHHHHHHHHHHHHHT-
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEE-EEeCHHHHHHHHHHHHhc-
Confidence 688999999 56899999999999999998876544321 11111212111122111 134577888888888775
Q ss_pred CCcccEEEecCC
Q 027816 93 NGKLNILVNNVG 104 (218)
Q Consensus 93 ~~~id~vv~~ag 104 (218)
| +..++...|
T Consensus 80 -g-~k~v~~~~g 89 (116)
T d1y81a1 80 -G-FKKLWFQPG 89 (116)
T ss_dssp -T-CCEEEECTT
T ss_pred -C-CceEEeccc
Confidence 2 456666555
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=87.56 E-value=0.27 Score=35.21 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=29.1
Q ss_pred CcEEEEecCCCchHHH-----HHHHHHhCCCeEEEecCC
Q 027816 17 GMTALVTGGTRGIGQA-----TVEELAGLGAVVHTCSRN 50 (218)
Q Consensus 17 ~k~vlItGa~~giG~~-----la~~l~~~G~~V~~~~r~ 50 (218)
+|+|.|+|+-||.|+. +|..|+++|.+|.+++-+
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 6899999999999875 778888999999999854
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=87.33 E-value=2.3 Score=26.90 Aligned_cols=82 Identities=13% Similarity=0.008 Sum_probs=51.2
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
||+|||.=-...+...+...|-+.|++|+..+.+.+..-+..+ .....+...-.++-+.+ --+++.++++.. ..+
T Consensus 1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~---~~~~dliilD~~mp~~~-G~e~~~~ir~~~-~~~ 75 (118)
T d1u0sy_ 1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYK---ELKPDIVTMDITMPEMN-GIDAIKEIMKID-PNA 75 (118)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---HHCCSEEEEECSCGGGC-HHHHHHHHHHHC-TTC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHH---hccCCEEEEecCCCCCC-HHHHHHHHHHhC-CCC
Confidence 7899999888999999999999999998866655543333332 22333433333333332 334566666554 455
Q ss_pred cEEEecC
Q 027816 97 NILVNNV 103 (218)
Q Consensus 97 d~vv~~a 103 (218)
-+++..+
T Consensus 76 pvi~ls~ 82 (118)
T d1u0sy_ 76 KIIVCSA 82 (118)
T ss_dssp CEEEEEC
T ss_pred cEEEEEc
Confidence 6666653
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=86.65 E-value=3.2 Score=27.91 Aligned_cols=38 Identities=16% Similarity=0.010 Sum_probs=24.7
Q ss_pred EEEEecCCCchHHHHHHH-HHh-----CCCeEEEecCChhhHHHH
Q 027816 19 TALVTGGTRGIGQATVEE-LAG-----LGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~-l~~-----~G~~V~~~~r~~~~~~~~ 57 (218)
++.|.||++ +|...+.. +++ ++.++++.+.++++.+..
T Consensus 2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~ 45 (162)
T d1up7a1 2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIV 45 (162)
T ss_dssp EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHH
T ss_pred EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHH
Confidence 577888865 55554433 322 135899999999887643
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=86.64 E-value=0.7 Score=32.96 Aligned_cols=61 Identities=10% Similarity=0.092 Sum_probs=42.8
Q ss_pred CCcEEEEecCCCch-HHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCC
Q 027816 16 KGMTALVTGGTRGI-GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAA 76 (218)
Q Consensus 16 ~~k~vlItGa~~gi-G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~ 76 (218)
.+.+||=.||+.|- ...+++++...|++|+.++.+++-++.+.+.+... ...+.....|..
T Consensus 39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~ 102 (225)
T d1im8a_ 39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIR 102 (225)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTT
T ss_pred CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhh
Confidence 46689999998765 45566665567899999999999888777666433 234555555543
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=86.56 E-value=0.46 Score=32.18 Aligned_cols=32 Identities=19% Similarity=0.241 Sum_probs=25.4
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC---eEEEecC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA---VVHTCSR 49 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~---~V~~~~r 49 (218)
=+|-|.||||..|.++.+.|.++.+ ++...+.
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s 36 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS 36 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecc
Confidence 3688999999999999999999864 4544443
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=86.53 E-value=0.34 Score=35.70 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=25.1
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCC
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~ 50 (218)
|+|.| +|-.|..+|++|+++|.+|+++.+.
T Consensus 6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 56665 4677999999999999999999764
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=86.24 E-value=1.3 Score=26.87 Aligned_cols=68 Identities=18% Similarity=0.110 Sum_probs=44.4
Q ss_pred cEEEEecCCCchHH-HHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 027816 18 MTALVTGGTRGIGQ-ATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNGKL 96 (218)
Q Consensus 18 k~vlItGa~~giG~-~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~i 96 (218)
+++.+.| -+|+|- ++|+.|.++|++|...++......+ .+++.+..+.. .-|..+. ...
T Consensus 2 ~~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~Gi~i~~-gh~~~~i---------------~~~ 61 (89)
T d1j6ua1 2 MKIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKLGIPIFV-PHSADNW---------------YDP 61 (89)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHTTCCEES-SCCTTSC---------------CCC
T ss_pred cEEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHCCCeEEe-eeccccc---------------CCC
Confidence 4566665 456665 5899999999999999988654433 34555544432 2332221 246
Q ss_pred cEEEecCCC
Q 027816 97 NILVNNVGT 105 (218)
Q Consensus 97 d~vv~~ag~ 105 (218)
|.||...++
T Consensus 62 d~vV~SsAI 70 (89)
T d1j6ua1 62 DLVIKTPAV 70 (89)
T ss_dssp SEEEECTTC
T ss_pred CEEEEecCc
Confidence 999999886
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=86.04 E-value=0.64 Score=32.56 Aligned_cols=40 Identities=18% Similarity=0.124 Sum_probs=34.2
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
..+++++++.|.| -|.||+.+++.+..-|.+|...++...
T Consensus 39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~ 78 (188)
T d1sc6a1 39 SFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK 78 (188)
T ss_dssp CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cccccceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence 3468899999885 689999999999999999999987643
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=85.55 E-value=0.38 Score=35.55 Aligned_cols=37 Identities=24% Similarity=0.385 Sum_probs=30.8
Q ss_pred CCcEEEEecCCCchHHHH-----HHHHHhCCCeEEEecCChh
Q 027816 16 KGMTALVTGGTRGIGQAT-----VEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~l-----a~~l~~~G~~V~~~~r~~~ 52 (218)
.+++|+|+.|=||.|+.. |..|+++|.+|++++-+.+
T Consensus 18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 467778887899999874 7899999999999988754
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=85.38 E-value=0.71 Score=32.27 Aligned_cols=37 Identities=19% Similarity=0.132 Sum_probs=29.8
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHH
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKC 57 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~ 57 (218)
+|.|.| .|.+|..+|..|+ +|++|+..+.+++..+.+
T Consensus 2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l 38 (196)
T d1dlja2 2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI 38 (196)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence 466665 7999999997664 799999999998876544
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=85.11 E-value=1.2 Score=27.44 Aligned_cols=70 Identities=13% Similarity=0.128 Sum_probs=44.6
Q ss_pred CCcEEEEecCCCchH-HHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 16 KGMTALVTGGTRGIG-QATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 16 ~~k~vlItGa~~giG-~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+.|++.+.|-+ |+| .++|+.|.++|++|...++......+. +.+.+..+. ..+- .+. . .
T Consensus 7 ~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~---L~~~Gi~v~--~g~~--~~~-----------i-~ 66 (96)
T d1p3da1 7 RVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVTQR---LAQAGAKIY--IGHA--EEH-----------I-E 66 (96)
T ss_dssp TCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHHHH---HHHTTCEEE--ESCC--GGG-----------G-T
T ss_pred hCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhhhH---HHHCCCeEE--ECCc--ccc-----------C-C
Confidence 35788888754 444 568999999999999999876544333 334444433 2221 111 1 3
Q ss_pred cccEEEecCCC
Q 027816 95 KLNILVNNVGT 105 (218)
Q Consensus 95 ~id~vv~~ag~ 105 (218)
..|.||.+.++
T Consensus 67 ~~d~vV~S~AI 77 (96)
T d1p3da1 67 GASVVVVSSAI 77 (96)
T ss_dssp TCSEEEECTTS
T ss_pred CCCEEEECCCc
Confidence 56999999885
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=84.98 E-value=2.9 Score=30.94 Aligned_cols=77 Identities=16% Similarity=0.030 Sum_probs=53.5
Q ss_pred CcEEEEecCCCc-hHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCC-eEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 027816 17 GMTALVTGGTRG-IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGF-VVSGSVCDAASPDQREKLIQEVGSKFNG 94 (218)
Q Consensus 17 ~k~vlItGa~~g-iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 94 (218)
+.+++=.|+++| ||.++++.+ -..+|++++.++..++-+.++....+. .+..++.|+.+.- . +.
T Consensus 109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~---------~---~~ 174 (274)
T d2b3ta1 109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---------A---GQ 174 (274)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---------T---TC
T ss_pred ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc---------C---CC
Confidence 446777777655 566665543 346999999999998877777654443 4888888875431 1 24
Q ss_pred cccEEEecCCCCC
Q 027816 95 KLNILVNNVGTNI 107 (218)
Q Consensus 95 ~id~vv~~ag~~~ 107 (218)
+.|+||.|..+.+
T Consensus 175 ~fDlIvsNPPYi~ 187 (274)
T d2b3ta1 175 QFAMIVSNPPYID 187 (274)
T ss_dssp CEEEEEECCCCBC
T ss_pred ceeEEEecchhhh
Confidence 7899999987654
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=84.95 E-value=3.9 Score=27.29 Aligned_cols=81 Identities=14% Similarity=0.153 Sum_probs=52.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeC---CCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDA---ASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~---~~~~~~~~~~~~~~~~~ 92 (218)
+|+++.|.+.+||.|--.+..+.+.|-++ ..-+++..+++.+.+.... .....+|+ .+.+...+.++.+.+.
T Consensus 2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~--~~~NPlD~~~~~~~~~~~~~l~~~~~d- 76 (163)
T d2csua3 2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMA--AVKNPVDMIASARGEDYYRTAKLLLQD- 76 (163)
T ss_dssp SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTC--EESSEEECCTTCCHHHHHHHHHHHHHS-
T ss_pred CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcc--cCCCcccccCCCCHHHHHHHHHHHHcC-
Confidence 58899999999999999999999999766 3334444444444443211 11123444 4566677777777664
Q ss_pred CCcccEEEec
Q 027816 93 NGKLNILVNN 102 (218)
Q Consensus 93 ~~~id~vv~~ 102 (218)
+.+|.++..
T Consensus 77 -~~vd~v~v~ 85 (163)
T d2csua3 77 -PNVDMLIAI 85 (163)
T ss_dssp -TTCSEEEEE
T ss_pred -CCcCEEEEe
Confidence 467876544
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=84.95 E-value=0.6 Score=32.56 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=26.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCCC-eEEEecC
Q 027816 18 MTALVTGGTRGIGQATVEELAGLGA-VVHTCSR 49 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r 49 (218)
-+|-|.||||..|.++++.|.++-. ++..+..
T Consensus 6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S 38 (183)
T d2cvoa1 6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA 38 (183)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred cEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence 3789999999999999999999875 6555443
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.59 E-value=0.38 Score=35.62 Aligned_cols=33 Identities=15% Similarity=0.036 Sum_probs=28.6
Q ss_pred EEEEecCCCchHHHHHHHHHhCCCeEEEecCChh
Q 027816 19 TALVTGGTRGIGQATVEELAGLGAVVHTCSRNEV 52 (218)
Q Consensus 19 ~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~ 52 (218)
.|+|.||+ --|..+|..|.++|.+|.++.+..+
T Consensus 4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47888876 8899999999999999999988764
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=84.44 E-value=1.7 Score=30.89 Aligned_cols=74 Identities=14% Similarity=0.009 Sum_probs=51.5
Q ss_pred CcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCC-CeEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 027816 17 GMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKG-FVVSGSVCDAASPDQREKLIQEVGSKFNGK 95 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~ 95 (218)
|.+||=.||+.|.-. ..|++++++|+.++.++.-++.+.+.....+ ..+..++.|..+.. +. .+.
T Consensus 17 ~~rILDiGcGtG~~~---~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~~------~~~ 82 (234)
T d1xxla_ 17 EHRVLDIGAGAGHTA---LAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----FP------DDS 82 (234)
T ss_dssp TCEEEEESCTTSHHH---HHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----SC------TTC
T ss_pred CCEEEEeCCcCcHHH---HHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-----cc------ccc
Confidence 678999999988544 4577788999999999987776665554432 35777888865432 00 146
Q ss_pred ccEEEecCC
Q 027816 96 LNILVNNVG 104 (218)
Q Consensus 96 id~vv~~ag 104 (218)
.|+|+.+-.
T Consensus 83 fD~v~~~~~ 91 (234)
T d1xxla_ 83 FDIITCRYA 91 (234)
T ss_dssp EEEEEEESC
T ss_pred cceeeeece
Confidence 787777644
|
| >d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein YvdD species: Bacillus subtilis [TaxId: 1423]
Probab=84.36 E-value=4.2 Score=27.88 Aligned_cols=9 Identities=11% Similarity=0.195 Sum_probs=6.3
Q ss_pred cEEEecCCC
Q 027816 97 NILVNNVGT 105 (218)
Q Consensus 97 d~vv~~ag~ 105 (218)
|.+|...|.
T Consensus 99 dafI~lPGG 107 (179)
T d1t35a_ 99 DGFISMPGG 107 (179)
T ss_dssp SEEEECSCC
T ss_pred CeEEEecCc
Confidence 777777664
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.27 E-value=2.1 Score=27.86 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=26.1
Q ss_pred CcEEEEecCCCchHHHHHHHHH----hCCCeEEEecCCh
Q 027816 17 GMTALVTGGTRGIGQATVEELA----GLGAVVHTCSRNE 51 (218)
Q Consensus 17 ~k~vlItGa~~giG~~la~~l~----~~G~~V~~~~r~~ 51 (218)
.|+++|.|| |.+|-++|..|+ +.|.+|.++.+..
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~ 74 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK 74 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence 578888865 889999888886 3588998886643
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=84.22 E-value=2.1 Score=28.11 Aligned_cols=86 Identities=14% Similarity=-0.004 Sum_probs=54.3
Q ss_pred CCcEEEEecCC---CchHHHHHHHHHhCCCeEEEecCChhh--H--HHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHH
Q 027816 16 KGMTALVTGGT---RGIGQATVEELAGLGAVVHTCSRNEVE--L--NKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEV 88 (218)
Q Consensus 16 ~~k~vlItGa~---~giG~~la~~l~~~G~~V~~~~r~~~~--~--~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~ 88 (218)
+.|.|-|.||| +..|..+.+.|.+.|+.+..+..+... . ......+.+-...+....+ ....+.+.++++++
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~~ 90 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPEV 90 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHHH
Confidence 46899999999 578999999999999998887654321 1 1111111222222222222 34578888888888
Q ss_pred HhhcCCcccEEEecCCC
Q 027816 89 GSKFNGKLNILVNNVGT 105 (218)
Q Consensus 89 ~~~~~~~id~vv~~ag~ 105 (218)
.+. | +..++...|.
T Consensus 91 ~~~--g-~k~i~~q~G~ 104 (136)
T d1iuka_ 91 LAL--R-PGLVWLQSGI 104 (136)
T ss_dssp HHH--C-CSCEEECTTC
T ss_pred Hhh--C-CCeEEEecCc
Confidence 776 2 4556666664
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=84.06 E-value=1.4 Score=30.05 Aligned_cols=41 Identities=20% Similarity=0.395 Sum_probs=35.6
Q ss_pred CCccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 12 RWSLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 12 ~~~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
...+.||+++|.| =|-+|+.+|.++...|++|+++..++-.
T Consensus 18 ~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~ 58 (163)
T d1v8ba1 18 DFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC 58 (163)
T ss_dssp CCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred CceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence 4567899999887 4779999999999999999999988754
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=83.85 E-value=0.69 Score=33.84 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=28.1
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHh-CCCeEEEec
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAG-LGAVVHTCS 48 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~-~G~~V~~~~ 48 (218)
+++||+|.|-|- |-.|.++|+.|++ .|+.|+.++
T Consensus 29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs 63 (239)
T d1gtma1 29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS 63 (239)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence 578999999987 5599999999986 588877664
|
| >d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein At5g11950 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.80 E-value=2.7 Score=28.98 Aligned_cols=27 Identities=26% Similarity=0.217 Sum_probs=14.3
Q ss_pred EEecCCC-chHHHHHHHHHhCCCeEEEe
Q 027816 21 LVTGGTR-GIGQATVEELAGLGAVVHTC 47 (218)
Q Consensus 21 lItGa~~-giG~~la~~l~~~G~~V~~~ 47 (218)
+|+||+. |+=-++++...+.|.+|+.+
T Consensus 37 lv~GGG~~GlMga~a~ga~~~gg~viGv 64 (181)
T d1ydhb_ 37 LVYGGGSVGLMGLISRRVYEGGLHVLGI 64 (181)
T ss_dssp EEECCCSSHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCchHHHHHHHHhHhhcCCccccc
Confidence 4455433 55555555555555555444
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=83.77 E-value=0.44 Score=33.97 Aligned_cols=33 Identities=30% Similarity=0.344 Sum_probs=27.9
Q ss_pred cEEEEecCCCchHHH-----HHHHHHhCCCeEEEecCC
Q 027816 18 MTALVTGGTRGIGQA-----TVEELAGLGAVVHTCSRN 50 (218)
Q Consensus 18 k~vlItGa~~giG~~-----la~~l~~~G~~V~~~~r~ 50 (218)
|+|.|+++-||.|+. +|..|+++|.+|.+++-+
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 689999999998875 677888999999998754
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.35 E-value=3.8 Score=28.88 Aligned_cols=74 Identities=9% Similarity=0.054 Sum_probs=49.0
Q ss_pred CcEEEEecCCCchHHH-HHHH---HHhCC-----CeEEEecCChhhHHHHHHHhhh--------------CCCeEEEEEe
Q 027816 17 GMTALVTGGTRGIGQA-TVEE---LAGLG-----AVVHTCSRNEVELNKCLKEWQS--------------KGFVVSGSVC 73 (218)
Q Consensus 17 ~k~vlItGa~~giG~~-la~~---l~~~G-----~~V~~~~r~~~~~~~~~~~~~~--------------~~~~v~~~~~ 73 (218)
.-+++|.||+|-+.+. |.-. |...| ..|+.++|++-..+...+.+.. -...+.++..
T Consensus 20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~ 99 (203)
T d1qkia1 20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG 99 (203)
T ss_dssp CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence 4579999999999775 3333 34444 4799999875443333333211 0235788899
Q ss_pred eCCCHHHHHHHHHHHHh
Q 027816 74 DAASPDQREKLIQEVGS 90 (218)
Q Consensus 74 D~~~~~~~~~~~~~~~~ 90 (218)
|.++.++..++-+.+.+
T Consensus 100 d~~~~~~~~~L~~~l~~ 116 (203)
T d1qkia1 100 QYDDAASYQRLNSHMNA 116 (203)
T ss_dssp CTTCHHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHH
Confidence 99999998888766654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=83.05 E-value=5.1 Score=27.14 Aligned_cols=43 Identities=9% Similarity=0.112 Sum_probs=27.2
Q ss_pred cEEEEecCCCchHHHHHHHHHhC-----CCeEEEecCChhhHHHHHHH
Q 027816 18 MTALVTGGTRGIGQATVEELAGL-----GAVVHTCSRNEVELNKCLKE 60 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~-----G~~V~~~~r~~~~~~~~~~~ 60 (218)
.+|.|.||++.....+...++.+ +.++++.+.++++++.....
T Consensus 4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~ 51 (167)
T d1u8xx1 4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGA 51 (167)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHH
T ss_pred ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHH
Confidence 35677788665443444444442 24899999999987644333
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=82.30 E-value=3.5 Score=30.05 Aligned_cols=75 Identities=20% Similarity=0.194 Sum_probs=53.3
Q ss_pred CCcEEEEecCCCch-HHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGI-GQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~gi-G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.|.+||=.|+++|. ...+++.+... .+|+.++++++..+.+.+++... ...+.....|+.+.- .
T Consensus 85 pG~rVLEiG~GsG~lt~~la~~v~~~-g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~------~------ 151 (250)
T d1yb2a1 85 PGMDILEVGVGSGNMSSYILYALNGK-GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------S------ 151 (250)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTS-SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC------C------
T ss_pred CcCEEEEeeeeCcHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc------c------
Confidence 36899999998774 55566665444 49999999999888888877542 356888888876521 0
Q ss_pred CCcccEEEecC
Q 027816 93 NGKLNILVNNV 103 (218)
Q Consensus 93 ~~~id~vv~~a 103 (218)
....|.|+.+.
T Consensus 152 ~~~fD~V~ld~ 162 (250)
T d1yb2a1 152 DQMYDAVIADI 162 (250)
T ss_dssp SCCEEEEEECC
T ss_pred cceeeeeeecC
Confidence 14679998763
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=81.84 E-value=0.6 Score=31.82 Aligned_cols=32 Identities=16% Similarity=0.123 Sum_probs=24.7
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCCe--EEEec
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGAV--VHTCS 48 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~~--V~~~~ 48 (218)
.+++|+|.| +|.+|.++|..|.+.|.+ |+...
T Consensus 2 ~~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~ 35 (185)
T d1q1ra1 2 ANDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVG 35 (185)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEec
Confidence 467877776 578999999999999975 44444
|
| >d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein At2g37210/T2N18.3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.32 E-value=5.1 Score=27.54 Aligned_cols=54 Identities=13% Similarity=-0.044 Sum_probs=28.1
Q ss_pred cEEEEecCCCc--------hHHHHHHHHHhCCCeEEEecCChhhHHHHHHHhhhCCCeEEEE
Q 027816 18 MTALVTGGTRG--------IGQATVEELAGLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGS 71 (218)
Q Consensus 18 k~vlItGa~~g--------iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~ 71 (218)
|+|.|.|+++. ....+++.|+++|+.|+..+-...-.....+...+.+..+..+
T Consensus 7 k~v~Vf~gs~~~~~~~~~~~a~~lg~~la~~g~~lV~GGG~~GlMga~a~ga~~~gg~v~Gi 68 (183)
T d2q4oa1 7 RRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGI 68 (183)
T ss_dssp SEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEECcCCCCcCCHHHHHHHHHHHHHHHcCCeEEECCCCcchHHHHHHHHHhcCCccccc
Confidence 45666665531 2556667777777776666554443333333333333334443
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=81.28 E-value=2.3 Score=30.63 Aligned_cols=77 Identities=14% Similarity=0.139 Sum_probs=53.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC--CCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK--GFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
.+++||=.||+.|- .+..+++.|. +|+.++.+++.++.+.+...+. ...+...+.|+....- ..
T Consensus 24 ~~~~VLDlGCG~G~---~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~----------~~ 90 (252)
T d1ri5a_ 24 RGDSVLDLGCGKGG---DLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM----------DL 90 (252)
T ss_dssp TTCEEEEETCTTTT---THHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC----------CC
T ss_pred CcCEEEEecccCcH---HHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc----------cc
Confidence 57899999999762 3445666675 7999999999988877766543 3478888888743211 01
Q ss_pred CCcccEEEecCCC
Q 027816 93 NGKLNILVNNVGT 105 (218)
Q Consensus 93 ~~~id~vv~~ag~ 105 (218)
++..|+|+++.+.
T Consensus 91 ~~~fD~V~~~~~l 103 (252)
T d1ri5a_ 91 GKEFDVISSQFSF 103 (252)
T ss_dssp SSCEEEEEEESCG
T ss_pred cccceEEEEccee
Confidence 2467998877553
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=81.01 E-value=1 Score=31.11 Aligned_cols=29 Identities=14% Similarity=0.226 Sum_probs=24.5
Q ss_pred cEEEEecCCCchHHHHHHHHHhCC-CeEEE
Q 027816 18 MTALVTGGTRGIGQATVEELAGLG-AVVHT 46 (218)
Q Consensus 18 k~vlItGa~~giG~~la~~l~~~G-~~V~~ 46 (218)
.+|.|.||||..|.++.+.|.++. .++..
T Consensus 2 ikVaIiGATGyvG~eLlrlL~~HP~~ei~~ 31 (179)
T d2g17a1 2 LNTLIVGASGYAGAELVSYVNRHPHMTITA 31 (179)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEE
T ss_pred cEEEEECcccHHHHHHHHHHHhCCCCceEe
Confidence 368999999999999999999995 45543
|
| >d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Cobalamin (vitamin B12)-binding domain family: Cobalamin (vitamin B12)-binding domain domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
Probab=80.94 E-value=5.9 Score=26.91 Aligned_cols=76 Identities=17% Similarity=0.159 Sum_probs=49.1
Q ss_pred CchHHHHHHHHH-hCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEE-eeCCCHHHHHHHHHHHHhhcCCcccEEEecCC
Q 027816 27 RGIGQATVEELA-GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSV-CDAASPDQREKLIQEVGSKFNGKLNILVNNVG 104 (218)
Q Consensus 27 ~giG~~la~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~-~D~~~~~~~~~~~~~~~~~~~~~id~vv~~ag 104 (218)
-.+|..++..++ ..|++|+..+..... ++..+...+.+.++..+. .+-+..+.+.++.+.+++. +..|+.|...|
T Consensus 50 Hd~G~~~va~~l~~~G~eVi~lg~~~~~-e~iv~aa~~~~advI~iSs~~~~~~~~~~~l~~~L~~~--g~~~v~VivGG 126 (168)
T d7reqa2 50 HDRGQKVIATAYADLGFDVDVGPLFQTP-EETARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKL--GRPDILITVGG 126 (168)
T ss_dssp CCHHHHHHHHHHHHTTCEEEECCTTBCH-HHHHHHHHHHTCSEEEEEECSSCHHHHHHHHHHHHHHT--TCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHhCCcceecCCCcCcH-HHHHHHHHccCCCEEEEecCcccchHHHHHHHHHHHhc--CCCCeEEEEeC
Confidence 467888555555 579999988765433 344444444445555554 5566677888888888876 45677777666
Q ss_pred C
Q 027816 105 T 105 (218)
Q Consensus 105 ~ 105 (218)
.
T Consensus 127 ~ 127 (168)
T d7reqa2 127 V 127 (168)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=80.86 E-value=6.5 Score=26.85 Aligned_cols=81 Identities=11% Similarity=0.023 Sum_probs=53.2
Q ss_pred ccCCcEEEEecCC-CchHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhh--CCCeEEEEEeeCCCHHHHHHHHHHHH
Q 027816 14 SLKGMTALVTGGT-RGIGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQS--KGFVVSGSVCDAASPDQREKLIQEVG 89 (218)
Q Consensus 14 ~~~~k~vlItGa~-~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~ 89 (218)
..+|+++|=..|+ |.+|.+ .+.+|+ +|+.++.+.+..+.+.+.+.. ....+..+..|+ .++++.+.
T Consensus 39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~------~~~l~~~~ 108 (182)
T d2fhpa1 39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA------NRALEQFY 108 (182)
T ss_dssp CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH------HHHHHHHH
T ss_pred hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc------hhhhhhhc
Confidence 3568887765555 556765 567888 699999999888777666543 233577777774 22344443
Q ss_pred hhcCCcccEEEecCCC
Q 027816 90 SKFNGKLNILVNNVGT 105 (218)
Q Consensus 90 ~~~~~~id~vv~~ag~ 105 (218)
+.. .+.|+|+..+.+
T Consensus 109 ~~~-~~fDlIflDPPY 123 (182)
T d2fhpa1 109 EEK-LQFDLVLLDPPY 123 (182)
T ss_dssp HTT-CCEEEEEECCCG
T ss_pred ccC-CCcceEEechhh
Confidence 332 478999987653
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=80.83 E-value=2.2 Score=31.55 Aligned_cols=74 Identities=16% Similarity=0.051 Sum_probs=50.9
Q ss_pred CCcEEEEecCCCchHHHHHHHHH---hCCCeEEEecCChhhHHHHHHHhhhCCCeEEEEEeeCCCHHHHHHHHHHHHhhc
Q 027816 16 KGMTALVTGGTRGIGQATVEELA---GLGAVVHTCSRNEVELNKCLKEWQSKGFVVSGSVCDAASPDQREKLIQEVGSKF 92 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~---~~G~~V~~~~r~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 92 (218)
++++||=.||+.|. ++..|+ ..|.+|+.++.++...+...+.....+..+.....|+.+.+ +
T Consensus 27 ~~~~ILDiGcG~G~---~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~------------~ 91 (281)
T d2gh1a1 27 KPVHIVDYGCGYGY---LGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE------------L 91 (281)
T ss_dssp SCCEEEEETCTTTH---HHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC------------C
T ss_pred CcCEEEEecCcCCH---HHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc------------c
Confidence 45689999988763 333344 35789999999999888877777666667777788866532 1
Q ss_pred CCcccEEEecCC
Q 027816 93 NGKLNILVNNVG 104 (218)
Q Consensus 93 ~~~id~vv~~ag 104 (218)
.+..|+|+.+..
T Consensus 92 ~~~fD~v~~~~~ 103 (281)
T d2gh1a1 92 NDKYDIAICHAF 103 (281)
T ss_dssp SSCEEEEEEESC
T ss_pred cCCceEEEEehh
Confidence 134677776654
|
| >d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methylase YhhF species: Escherichia coli [TaxId: 562]
Probab=80.68 E-value=6.5 Score=26.79 Aligned_cols=77 Identities=12% Similarity=-0.018 Sum_probs=50.2
Q ss_pred cCCcEEEEecCCCc-hHHHHHHHHHhCCC-eEEEecCChhhHHHHHHHhhhC-CCeEEEEEeeCCCHHHHHHHHHHHHhh
Q 027816 15 LKGMTALVTGGTRG-IGQATVEELAGLGA-VVHTCSRNEVELNKCLKEWQSK-GFVVSGSVCDAASPDQREKLIQEVGSK 91 (218)
Q Consensus 15 ~~~k~vlItGa~~g-iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~ 91 (218)
+.++++|=.+|++| +|. +.+.+|+ +|+.++.+.+..+.+.+.+... ...+..+..|+ ++-+..
T Consensus 42 ~~~~~vLDlfaGsG~~gi----ealsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~---------~~~l~~- 107 (183)
T d2fpoa1 42 IVDAQCLDCFAGSGALGL----EALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNA---------MSFLAQ- 107 (183)
T ss_dssp HTTCEEEETTCTTCHHHH----HHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCH---------HHHHSS-
T ss_pred cchhhhhhhhccccceee----eEEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeecc---------cccccc-
Confidence 56777776666544 444 4567898 7999999999888777666533 33566666662 222222
Q ss_pred cCCcccEEEecCCC
Q 027816 92 FNGKLNILVNNVGT 105 (218)
Q Consensus 92 ~~~~id~vv~~ag~ 105 (218)
.+.+.|+|+....+
T Consensus 108 ~~~~fDlIf~DPPY 121 (183)
T d2fpoa1 108 KGTPHNIVFVDPPF 121 (183)
T ss_dssp CCCCEEEEEECCSS
T ss_pred cccccCEEEEcCcc
Confidence 23578999988653
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=80.55 E-value=6.1 Score=29.67 Aligned_cols=75 Identities=11% Similarity=0.128 Sum_probs=44.5
Q ss_pred CCcEEEEecCCCchHHHHHHHHHhCC--CeEEEecCChhhHHHHHHHhh------hCCCeEEEEEeeCCCHHHHHHHHHH
Q 027816 16 KGMTALVTGGTRGIGQATVEELAGLG--AVVHTCSRNEVELNKCLKEWQ------SKGFVVSGSVCDAASPDQREKLIQE 87 (218)
Q Consensus 16 ~~k~vlItGa~~giG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~------~~~~~v~~~~~D~~~~~~~~~~~~~ 87 (218)
..|+|||.|+++|. +++++++.. .+|.++..+++-.+-..+.+. -...++..+..|.. +.+++
T Consensus 77 ~pk~VLiiG~G~G~---~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~------~~l~~ 147 (312)
T d1uira_ 77 EPKRVLIVGGGEGA---TLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDAR------AYLER 147 (312)
T ss_dssp CCCEEEEEECTTSH---HHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHH------HHHHH
T ss_pred CcceEEEeCCCchH---HHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHH------HHhhh
Confidence 35799999998763 445555543 489999998876654443331 12345666666621 12222
Q ss_pred HHhhcCCcccEEEecC
Q 027816 88 VGSKFNGKLNILVNNV 103 (218)
Q Consensus 88 ~~~~~~~~id~vv~~a 103 (218)
.+.+.|+|+.-.
T Consensus 148 ----~~~~yDvIi~D~ 159 (312)
T d1uira_ 148 ----TEERYDVVIIDL 159 (312)
T ss_dssp ----CCCCEEEEEEEC
T ss_pred ----cCCcccEEEEeC
Confidence 224678888654
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=80.50 E-value=0.85 Score=32.71 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=26.8
Q ss_pred EEEecCCCchHHHHHHHHHhCCCeEEEecCChhh
Q 027816 20 ALVTGGTRGIGQATVEELAGLGAVVHTCSRNEVE 53 (218)
Q Consensus 20 vlItGa~~giG~~la~~l~~~G~~V~~~~r~~~~ 53 (218)
|+|.||+ .-|...|..|+++|.+|+++.++...
T Consensus 5 ViIIGaG-~aGl~aA~~la~~G~~V~liEk~~~~ 37 (251)
T d2i0za1 5 VIVIGGG-PSGLMAAIGAAEEGANVLLLDKGNKL 37 (251)
T ss_dssp EEEECCS-HHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred EEEECcC-HHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 5777754 67888999999999999999886543
|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=80.01 E-value=1.8 Score=29.33 Aligned_cols=37 Identities=19% Similarity=0.317 Sum_probs=33.3
Q ss_pred ccCCcEEEEecCCCchHHHHHHHHHhCCCeEEEecCC
Q 027816 14 SLKGMTALVTGGTRGIGQATVEELAGLGAVVHTCSRN 50 (218)
Q Consensus 14 ~~~~k~vlItGa~~giG~~la~~l~~~G~~V~~~~r~ 50 (218)
+++|++|++.|-.+.+..+++..+..-|++|.+++..
T Consensus 1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~ 37 (163)
T d1pvva2 1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE 37 (163)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence 4689999999999999999999999999999998764
|