Query 027817
Match_columns 218
No_of_seqs 210 out of 1045
Neff 5.4
Searched_HMMs 13730
Date Tue Mar 26 02:54:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027817.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027817hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ryba_ c.56.3.1 (A:) Chloropl 100.0 4.9E-76 3.6E-80 497.3 19.1 189 17-205 2-190 (191)
2 d2ptha_ c.56.3.1 (A:) Peptidyl 100.0 4E-75 2.9E-79 492.3 20.2 191 17-207 1-192 (193)
3 d1cfza_ c.56.1.1 (A:) Hydrogen 60.5 4.4 0.00032 30.2 4.3 134 19-188 3-150 (162)
4 d1c8ba_ c.56.1.2 (A:) Germinat 54.3 3.7 0.00027 35.4 3.1 89 15-123 111-214 (371)
5 d2inwa1 d.110.8.1 (A:4-120) Hy 50.5 9.4 0.00069 27.6 4.4 30 165-194 48-77 (117)
6 d2ea9a1 d.110.8.1 (A:8-110) Hy 49.4 8.1 0.00059 27.4 3.8 30 165-194 37-66 (103)
7 d2a6aa1 c.55.1.9 (A:1-103) Hyp 35.1 16 0.0011 24.8 3.4 33 18-54 56-88 (103)
8 d1urha1 c.46.1.2 (A:2-148) 3-m 28.8 25 0.0018 25.0 3.8 31 80-110 64-94 (147)
9 d1rlma_ c.108.1.10 (A:) Sugar 28.6 13 0.00094 28.0 2.2 57 86-168 192-249 (269)
10 d1am7a_ d.2.1.4 (A:) Lambda ly 26.4 32 0.0023 25.5 4.1 43 162-204 80-122 (154)
11 d1uara1 c.46.1.2 (A:2-144) Sul 25.2 29 0.0021 24.6 3.6 33 77-109 54-86 (143)
12 d1s2oa1 c.108.1.10 (A:1-244) S 24.5 19 0.0013 26.7 2.4 26 85-110 163-188 (244)
13 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 24.2 68 0.005 19.9 4.9 39 166-204 2-47 (59)
14 d1okga1 c.46.1.2 (A:7-162) 3-m 23.3 23 0.0017 26.0 2.7 26 85-110 73-98 (156)
15 d1wdea_ c.90.1.1 (A:) Diphthin 21.0 20 0.0014 28.5 2.0 13 18-31 4-16 (289)
16 d1l6ra_ c.108.1.10 (A:) Phosph 20.9 22 0.0016 26.0 2.2 24 86-109 153-176 (225)
17 d2cjja1 a.4.1.3 (A:8-70) Radia 20.3 66 0.0048 19.6 4.2 39 166-204 2-48 (63)
18 d1nrwa_ c.108.1.10 (A:) Hypoth 20.1 25 0.0018 26.3 2.4 24 86-109 215-238 (285)
No 1
>d1ryba_ c.56.3.1 (A:) Chloroplast group II intron splicing factor Crs2 {Maize (Zea mays) [TaxId: 4577]}
Probab=100.00 E-value=4.9e-76 Score=497.33 Aligned_cols=189 Identities=58% Similarity=1.075 Sum_probs=177.1
Q ss_pred CCeEEEEecCCCCCcCcCcchHHHHHHHHHHHHcCCCCCccccceEEEEEEECCeeEEEEeCCCcccccchhHHHHHHHc
Q 027817 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYY 96 (218)
Q Consensus 17 ~~~LIvGLGNPG~~Y~~TRHNvGf~vld~La~~~~~~~~~~k~~~~~~~~~~~~~~v~L~KP~TyMN~SG~aV~~~~~~~ 96 (218)
.+||||||||||++|++|||||||+++|.||++++.+++..++.+.++...+++++++|+||+||||+||++|++++++|
T Consensus 2 ~p~LIvGLGNPG~~Y~~TRHNiG~~~ld~la~~~~~~~~~~k~~~~~~~~~~~~~~v~L~kP~tyMN~SG~av~~~~~~~ 81 (191)
T d1ryba_ 2 TPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYY 81 (191)
T ss_dssp CCEEEEECCCCSGGGTTBGGGHHHHHHHHHHHHTTCCCCEEETTEEEEEEEETTEEEEEEEECSCGGGHHHHHHHHHHHT
T ss_pred CceEEEEcCCCCccccCCccHHHHHHHHHHHHHcCCCcccccccceEEEEeccCceEEEEecCcccccccHHHHHHHHhh
Confidence 36999999999999999999999999999999999998888888899999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeecCCCCCceEEEecCCCCCCCCchhhHHHhhcCCCCccEEEEeecCCCCCCCccccccCcCCHHHHHHH
Q 027817 97 KLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARERI 176 (218)
Q Consensus 97 ki~~~~ilVihDDldlp~G~vrlk~gGs~gGHNGLkSIi~~L~gt~~f~RlrIGIGrP~~~~~v~~yVLs~f~~~E~~~l 176 (218)
++++++++|||||+|||+|++|+|.+||+|||||||||+++|+|+++|+|||||||||+.+.++++|||++|+++|++.+
T Consensus 82 ~i~~~~ilVihDDldl~~G~irlk~~Gs~gGHNGlkSIi~~L~gt~~f~RlriGIg~p~~~~~~~~~VL~~f~~~E~~~l 161 (191)
T d1ryba_ 82 QVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQI 161 (191)
T ss_dssp TCCGGGEEEEEEETTSCTTCEEEESSCCCTTCHHHHHHHHHTTTCCCSCEEEEECCCCSTTCCHHHHHTSBCCHHHHHHH
T ss_pred ccCcceeEEEEcccccccCceeeccCCCCCcCcchhhHHHHhCCchheEEEeecCCCCcccCCcccccCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999966788999999999998778999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHhhhch
Q 027817 177 DTALQEGVEVLKLLLSKGLTESARHFNTI 205 (218)
Q Consensus 177 ~~~i~~a~~~~~~~i~~~~~~amn~~n~~ 205 (218)
+++++.++++++.|+++|+++|||+||..
T Consensus 162 ~~~~~~~~~~~~~~i~~~~~~~mn~~N~~ 190 (191)
T d1ryba_ 162 DTALEQGVDAVRTLVLKGFSGSTERFNLV 190 (191)
T ss_dssp HHHHHHHHHHHHHHHHHC-----CCCCCC
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHhhCC
Confidence 99999999999999999999999999963
No 2
>d2ptha_ c.56.3.1 (A:) Peptidyl-tRNA hydrolase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4e-75 Score=492.32 Aligned_cols=191 Identities=34% Similarity=0.614 Sum_probs=180.5
Q ss_pred CCeEEEEecCCCCCcCcCcchHHHHHHHHHHHHcCCCCCc-cccceEEEEEEECCeeEEEEeCCCcccccchhHHHHHHH
Q 027817 17 RPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNT-VHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAY 95 (218)
Q Consensus 17 ~~~LIvGLGNPG~~Y~~TRHNvGf~vld~La~~~~~~~~~-~k~~~~~~~~~~~~~~v~L~KP~TyMN~SG~aV~~~~~~ 95 (218)
.|+|||||||||++|++|||||||+++|.||++++.++.. .++.+.++...+.+.+++|+||+||||+||++|++++++
T Consensus 1 ~mklivGLGNPG~~Y~~TRHNiG~~~ld~la~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~kP~tyMN~SG~~v~~~~~~ 80 (193)
T d2ptha_ 1 TIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAKFFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASF 80 (193)
T ss_dssp CCCEEEECCCCSTTTTTSGGGHHHHHHHHHHHHHTCCCEEEGGGTEEEEEEEETTEEEEEEEECSCGGGTHHHHHHHHHH
T ss_pred CEEEEEECCCCchhhCcCchHHHHHHHHHHHHHcCCCcccccccceeeeeeeecCceEEEEecceeccccchhHHHHHHH
Confidence 4789999999999999999999999999999999999764 467788888899999999999999999999999999999
Q ss_pred cCCCCCcEEEEeecCCCCCceEEEecCCCCCCCCchhhHHHhhcCCCCccEEEEeecCCCCCCCccccccCcCCHHHHHH
Q 027817 96 YKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNAIARER 175 (218)
Q Consensus 96 ~ki~~~~ilVihDDldlp~G~vrlk~gGs~gGHNGLkSIi~~L~gt~~f~RlrIGIGrP~~~~~v~~yVLs~f~~~E~~~ 175 (218)
|++++++++|||||+|||+|++|+|.+||+|||||||||+++|+.+++|+|||||||||+.+.++++|||++|+++|++.
T Consensus 81 ~~i~~~~ilVihDDldl~~G~irlk~~Gs~gGHNGlkSI~~~LG~~~~f~RlriGIG~P~~~~~v~~yVL~~fs~~E~~~ 160 (193)
T d2ptha_ 81 FRINPDEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKL 160 (193)
T ss_dssp HTCCGGGEEEEEEETTSCTTCEEEEESCCCTTCHHHHHHHHHTTSCCCSEEEEEECCCCSSHHHHHHHHTSCCCHHHHHH
T ss_pred hCCCHHHeEEEecchhccCCCcccccCCCccccccHHHHHHHhhcccchheeeeeccCCcccCCccceeCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999994345899999999999877789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHhhhchhh
Q 027817 176 IDTALQEGVEVLKLLLSKGLTESARHFNTIQK 207 (218)
Q Consensus 176 l~~~i~~a~~~~~~~i~~~~~~amn~~n~~~~ 207 (218)
++++++.|+++++.|+++|+++|||+||+.+.
T Consensus 161 l~~~i~~~~~~i~~~i~~g~~~amn~~N~~k~ 192 (193)
T d2ptha_ 161 IDEAIDEAARCTEMWFTDGLTKATNRLHAFKA 192 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHhCcCC
Confidence 99999999999999999999999999998654
No 3
>d1cfza_ c.56.1.1 (A:) Hydrogenase maturating endopeptidase HybD {Escherichia coli [TaxId: 562]}
Probab=60.52 E-value=4.4 Score=30.18 Aligned_cols=134 Identities=20% Similarity=0.280 Sum_probs=72.2
Q ss_pred eEEEEecCCCCCcCcCcchHHHHHHHHHHHHcCCCCCccccceEEEEEEECCeeEEEEeCCCcccccchhHHHHHHHcCC
Q 027817 19 WLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNLSGESTGPLAAYYKL 98 (218)
Q Consensus 19 ~LIvGLGNPG~~Y~~TRHNvGf~vld~La~~~~~~~~~~k~~~~~~~~~~~~~~v~L~KP~TyMN~SG~aV~~~~~~~ki 98 (218)
.+|+|+|||-. .===+|..++++|++++..+. .+-++-- ...|.- ++.++.
T Consensus 3 ilVlGiGN~l~----gDDgvG~~v~~~L~~~~~~~~-----------------~v~v~d~----g~~~~~---l~~~l~- 53 (162)
T d1cfza_ 3 ILVLGVGNILL----TDEAIGVRIVEALEQRYILPD-----------------YVEILDG----GTAGME---LLGDMA- 53 (162)
T ss_dssp EEEEEESCTTB----GGGGHHHHHHHHHHHHEECCT-----------------TEEEEEE----ETCCGG---GHHHHS-
T ss_pred EEEEEECCccc----ccCcHHHHHHHHHHHhcCCCC-----------------CeEEEEC----CCCHHH---HHHHHc-
Confidence 57999999942 344699999999999864321 1111111 112222 233321
Q ss_pred CCCcEEEEeecC---CCCCceEEEecCC--------CCCCC-CchhhHHHhhcCCCCcc-EEEE-eecCCCCCCCccccc
Q 027817 99 PLNRVLVFHDDM---GLPCGVLRLRHNG--------GHGGH-NGLKSVMNNFRGNREFA-RLRI-GIGRPPGQMDPKAFL 164 (218)
Q Consensus 99 ~~~~ilVihDDl---dlp~G~vrlk~gG--------s~gGH-NGLkSIi~~L~gt~~f~-RlrI-GIGrP~~~~~v~~yV 164 (218)
..+ .+||.|.. +.++|+++.-..- +...| =|+..++..+.-..+++ ++.| ||- |. ++ +|-
T Consensus 54 ~~d-~viivDA~~~~~~~pG~v~~~~~~~l~~~~~~~~s~H~~~l~~~l~~~~~~~~~p~~v~lvgie-~~---~~-~~g 127 (162)
T d1cfza_ 54 NRD-HLIIADAIVSKKNAPGTMMILRDEEVPALFTNKISPHQLGLADVLSALRFTGEFPKKLTLVGVI-PE---SL-EPH 127 (162)
T ss_dssp SCS-EEEEEEECCSSCSCTTCEEEEETTHHHHHHCCSSCHHHHHHHHHHHHHHHTTCCCSEEEEEEEC-CS---CC-CSB
T ss_pred CCC-eEEEEEEeecCCCCCeEEEEEchhhcccccccCcCCCcCCHHHHHHHHHHcCCCCCeEEEEEEE-Ee---ec-cCC
Confidence 234 45566653 6899999865421 11224 37777765432112343 6655 774 32 22 442
Q ss_pred cCcCCHHHHHHHHHHHHHHHHHHH
Q 027817 165 LQKFNAIARERIDTALQEGVEVLK 188 (218)
Q Consensus 165 Ls~f~~~E~~~l~~~i~~a~~~~~ 188 (218)
...|++=++.++++++...+.++
T Consensus 128 -~~LS~~v~~av~~~~~~i~~~l~ 150 (162)
T d1cfza_ 128 -IGLTPTVEAMIEPALEQVLAALR 150 (162)
T ss_dssp -SSCCHHHHTTHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHH
Confidence 45777666666655555555444
No 4
>d1c8ba_ c.56.1.2 (A:) Germination protease {Bacillus megaterium [TaxId: 1404]}
Probab=54.29 E-value=3.7 Score=35.36 Aligned_cols=89 Identities=21% Similarity=0.260 Sum_probs=50.0
Q ss_pred CCCCeEEEEecCCCCCcCcCcchHHHHHHHHHH------HHcCCCCCccccceEEEEEEECCeeEEEEeCCCcccc----
Q 027817 15 VARPWLFVGLGNPGDKYKGTRHNVGFEMIDAFA------ESQGISMNTVHCKATFGQGFVGDAPVLLAKPQTYMNL---- 84 (218)
Q Consensus 15 ~~~~~LIvGLGNPG~~Y~~TRHNvGf~vld~La------~~~~~~~~~~k~~~~~~~~~~~~~~v~L~KP~TyMN~---- 84 (218)
.....|||||||.. -|--..|-.|++.|. +...-... . +-..|.-+-| --|=.
T Consensus 111 ~~~~vLVVGLGN~~----VTPDALGP~vv~~l~VTRHL~~~~p~~~~-~-----------g~r~VsaIaP-GVmg~TGiE 173 (371)
T d1c8ba_ 111 DDASCLVVGLGNLS----VTPDALGPKAVDNLLITRHLFELQPESVQ-D-----------GFRPVSAIVP-GVMGMTGIE 173 (371)
T ss_dssp TTCCEEEEECSCSS----SGGGCHHHHHHTTCCCCHHHHHHSCCSSC-S-----------SCCCEEEECS-GGGCCCSSC
T ss_pred CCCcEEEEeCCCCC----CCccccChheecceeeehhhhhhCchhhc-C-----------CCceeeEEcC-Ccccccccc
Confidence 34567999999964 599999999999432 21111110 0 1123444455 23433
Q ss_pred cchhHHHHHHHcCCCCCcEEEEeecCCCC-----CceEEEecCC
Q 027817 85 SGESTGPLAAYYKLPLNRVLVFHDDMGLP-----CGVLRLRHNG 123 (218)
Q Consensus 85 SG~aV~~~~~~~ki~~~~ilVihDDldlp-----~G~vrlk~gG 123 (218)
+++.|+.+++..| -+++|.-|-|--- -=+|.+.--|
T Consensus 174 T~EIIkgiVek~k---PD~VIaIDALAaRs~~Rln~TIQIsDTG 214 (371)
T d1c8ba_ 174 TSDIIFGVVKKVN---PDFIIAIDALAARSIERVNATIQISDSG 214 (371)
T ss_dssp HHHHHHHHHHHHC---CSEEEEEEEECCSSGGGSSSEEEEETTC
T ss_pred HHHHHHHHHHhcC---CCEEEEechhhcCchhhccceEEecCCC
Confidence 3455666666554 4566677865432 2346665544
No 5
>d2inwa1 d.110.8.1 (A:4-120) Hypothetical protein YeeU {Shigella flexneri [TaxId: 623]}
Probab=50.49 E-value=9.4 Score=27.56 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=26.4
Q ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 027817 165 LQKFNAIARERIDTALQEGVEVLKLLLSKG 194 (218)
Q Consensus 165 Ls~f~~~E~~~l~~~i~~a~~~~~~~i~~~ 194 (218)
-+.||++|...|+++++...+-++..+..|
T Consensus 48 ~G~Fs~~~~~~Ld~aFP~~ikqlE~ml~sG 77 (117)
T d2inwa1 48 RGRFSDVDAYHLDQAFPLLMKQLELMLTGG 77 (117)
T ss_dssp ESCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeecCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 489999999999999999999888887644
No 6
>d2ea9a1 d.110.8.1 (A:8-110) Hypothetical protein YfjZ {Escherichia coli [TaxId: 562]}
Probab=49.36 E-value=8.1 Score=27.38 Aligned_cols=30 Identities=17% Similarity=0.346 Sum_probs=26.3
Q ss_pred cCcCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 027817 165 LQKFNAIARERIDTALQEGVEVLKLLLSKG 194 (218)
Q Consensus 165 Ls~f~~~E~~~l~~~i~~a~~~~~~~i~~~ 194 (218)
-+.|+++|...|+++++...+-++..+..|
T Consensus 37 ~G~Fs~~~~~~Ld~aFP~~i~qle~ml~sG 66 (103)
T d2ea9a1 37 TGKFSDAECPKLDVVFPHFISQIESMLTTG 66 (103)
T ss_dssp ESCCCTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred eeecCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 489999999999999999999888877643
No 7
>d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]}
Probab=35.10 E-value=16 Score=24.79 Aligned_cols=33 Identities=30% Similarity=0.559 Sum_probs=26.3
Q ss_pred CeEEEEecCCCCCcCcCcchHHHHHHHHHHHHcCCCC
Q 027817 18 PWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGISM 54 (218)
Q Consensus 18 ~~LIvGLGNPG~~Y~~TRHNvGf~vld~La~~~~~~~ 54 (218)
..++|+.| ||+ |...| +|.-++..|+..++.+.
T Consensus 56 ~~i~v~~G-PGs-fTglR--ig~s~akgla~~~~ip~ 88 (103)
T d2a6aa1 56 DVVGVGIG-PGG-LTGLR--VGIATVVGLVSPYDIPV 88 (103)
T ss_dssp SEEEEECC-SSC-HHHHH--HHHHHHHHHHGGGTCCE
T ss_pred HHHhhcCC-CCc-chhHH--HHHHHHHHHHHHcCCCE
Confidence 35778888 885 88888 99999999998877653
No 8
>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=28.78 E-value=25 Score=25.03 Aligned_cols=31 Identities=13% Similarity=0.019 Sum_probs=25.5
Q ss_pred CcccccchhHHHHHHHcCCCCCcEEEEeecC
Q 027817 80 TYMNLSGESTGPLAAYYKLPLNRVLVFHDDM 110 (218)
Q Consensus 80 TyMN~SG~aV~~~~~~~ki~~~~ilVihDDl 110 (218)
.+|-.+-+.+.++++..+|..++-+||||+-
T Consensus 64 ~~~~p~~~~~~~~l~~~Gi~~~~~vVvY~~~ 94 (147)
T d1urha1 64 PHMLPRPETFAVAMRELGVNQDKHLIVYDEG 94 (147)
T ss_dssp SSCCCCHHHHHHHHHHTTCCTTSEEEEECSS
T ss_pred cccCCCHHHHHHHHHHhCcCCCCeEEEEeCC
Confidence 3555577778888999999999999999973
No 9
>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}
Probab=28.56 E-value=13 Score=27.95 Aligned_cols=57 Identities=14% Similarity=0.230 Sum_probs=38.0
Q ss_pred chhHHHHHHHcCCCCCcEEEEeecCCCCCceEEEecCCCCCCCCchhhHHHhhcCCCCccEEEEeecCCCCC-CCccccc
Q 027817 86 GESTGPLAAYYKLPLNRVLVFHDDMGLPCGVLRLRHNGGHGGHNGLKSVMNNFRGNREFARLRIGIGRPPGQ-MDPKAFL 164 (218)
Q Consensus 86 G~aV~~~~~~~ki~~~~ilVihDDldlp~G~vrlk~gGs~gGHNGLkSIi~~L~gt~~f~RlrIGIGrP~~~-~~v~~yV 164 (218)
|.++..+++.+++++++++.+=|+ +|=+ ..| +..-+.+.+|...+. ...++||
T Consensus 192 ~~al~~l~~~lgi~~~~vi~~GD~------------------~ND~----~Ml----~~ag~~vam~Na~~~lk~~A~~v 245 (269)
T d1rlma_ 192 ANGISRLLKRWDLSPQNVVAIGDS------------------GNDA----EML----KMARYSFAMGNAAENIKQIARYA 245 (269)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECS------------------GGGH----HHH----HHCSEEEECTTCCHHHHHHCSEE
T ss_pred HHHHHHHhhhhccccccEEEEcCC------------------cchH----HHH----HhCCeEEEeCCCCHHHHHhCCEE
Confidence 668889999999999999999983 3332 223 123467777763321 2457999
Q ss_pred cCcC
Q 027817 165 LQKF 168 (218)
Q Consensus 165 Ls~f 168 (218)
...-
T Consensus 246 ~~~~ 249 (269)
T d1rlma_ 246 TDDN 249 (269)
T ss_dssp CCCG
T ss_pred cCCC
Confidence 8643
No 10
>d1am7a_ d.2.1.4 (A:) Lambda lysozyme {Bacteriophage lambda [TaxId: 10710]}
Probab=26.42 E-value=32 Score=25.49 Aligned_cols=43 Identities=7% Similarity=0.149 Sum_probs=30.1
Q ss_pred ccccCcCCHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHhhhc
Q 027817 162 AFLLQKFNAIARERIDTALQEGVEVLKLLLSKGLTESARHFNT 204 (218)
Q Consensus 162 ~yVLs~f~~~E~~~l~~~i~~a~~~~~~~i~~~~~~amn~~n~ 204 (218)
.+=|.+|+|+.++.+...+-+-..++..+.+..++.+|+++..
T Consensus 80 ~~gl~~F~P~~QD~~a~~ll~~rg~~~~~~~G~~~~a~~~La~ 122 (154)
T d1am7a_ 80 QLGLKDFSPKSQDAVALQQIKERGALPMIDRGDIRQAIDRCSN 122 (154)
T ss_dssp HHTCCCCCHHHHHHHHHHHHHHTTCHHHHHHTCHHHHHHHHTT
T ss_pred hcCCCCCCHHHHHHHHHHHHHhcCchHHHhcCCHHHHHHHHHH
Confidence 3345779999998885433333345667777889999988764
No 11
>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}
Probab=25.19 E-value=29 Score=24.56 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=27.0
Q ss_pred eCCCcccccchhHHHHHHHcCCCCCcEEEEeec
Q 027817 77 KPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDD 109 (218)
Q Consensus 77 KP~TyMN~SG~aV~~~~~~~ki~~~~ilVihDD 109 (218)
.|.+.|-.+-+.+.+++..++|..++-+|+|++
T Consensus 54 ~~~~~~l~~~~~l~~~~~~~Gi~~~~~iVvy~~ 86 (143)
T d1uara1 54 DPVVRDFISEEEFAKLMERLGISNDTTVVLYGD 86 (143)
T ss_dssp CSSSSSBCCHHHHHHHHHHTTCCTTCEEEEECH
T ss_pred ccccccchhhHHHHHHhhhhccCCCceEEEecC
Confidence 355566677778888999999999999999976
No 12
>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=24.52 E-value=19 Score=26.68 Aligned_cols=26 Identities=23% Similarity=0.225 Sum_probs=23.2
Q ss_pred cchhHHHHHHHcCCCCCcEEEEeecC
Q 027817 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (218)
Q Consensus 85 SG~aV~~~~~~~ki~~~~ilVihDDl 110 (218)
-|.++..+++.+++++++++++=|+.
T Consensus 163 K~~a~~~l~~~~gi~~~~~v~~GD~~ 188 (244)
T d1s2oa1 163 KGNATQYLQQHLAMEPSQTLVCGDSG 188 (244)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEECSG
T ss_pred hhHHHHHHHHhccCChhhEEEEcCCC
Confidence 38899999999999999999998863
No 13
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.24 E-value=68 Score=19.85 Aligned_cols=39 Identities=8% Similarity=0.110 Sum_probs=26.0
Q ss_pred CcCCHHHHHHHHHHHHHH-------HHHHHHHHhcCHHHHHHhhhc
Q 027817 166 QKFNAIARERIDTALQEG-------VEVLKLLLSKGLTESARHFNT 204 (218)
Q Consensus 166 s~f~~~E~~~l~~~i~~a-------~~~~~~~i~~~~~~amn~~n~ 204 (218)
+++|++|...|++++... .+.|-..+....+.++.++..
T Consensus 2 ~eWT~ee~~~le~Al~~~P~gt~~RW~~IA~~vgkt~~ev~~~~k~ 47 (59)
T d2cqqa1 2 PEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQ 47 (59)
T ss_dssp CCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCcHHHHHHHHHHCCCHHHHHHHHHH
Confidence 468999999998876653 444444455567777776653
No 14
>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}
Probab=23.28 E-value=23 Score=26.00 Aligned_cols=26 Identities=8% Similarity=-0.135 Sum_probs=21.2
Q ss_pred cchhHHHHHHHcCCCCCcEEEEeecC
Q 027817 85 SGESTGPLAAYYKLPLNRVLVFHDDM 110 (218)
Q Consensus 85 SG~aV~~~~~~~ki~~~~ilVihDDl 110 (218)
+-+.+.+++...+|..++.|||||+-
T Consensus 73 ~~~~~~~~l~~lGI~~~~~VVvYd~~ 98 (156)
T d1okga1 73 PCAEFIDWCMANGMAGELPVLCYDDE 98 (156)
T ss_dssp CHHHHHHHHHHTTCSSSSCEEEECSS
T ss_pred CHHHHHHHHHhccccCCceEEEEeCC
Confidence 34566777888999999999999873
No 15
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]}
Probab=20.96 E-value=20 Score=28.52 Aligned_cols=13 Identities=31% Similarity=0.429 Sum_probs=10.4
Q ss_pred CeEEEEecCCCCCc
Q 027817 18 PWLFVGLGNPGDKY 31 (218)
Q Consensus 18 ~~LIvGLGNPG~~Y 31 (218)
+..||||| ||+++
T Consensus 4 ~l~iVGlG-pG~el 16 (289)
T d1wdea_ 4 TLLLVGWG-YAPGM 16 (289)
T ss_dssp EEEEEECB-SSTTC
T ss_pred EEEEEEec-cCchH
Confidence 35699999 89875
No 16
>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.87 E-value=22 Score=25.98 Aligned_cols=24 Identities=25% Similarity=0.420 Sum_probs=22.0
Q ss_pred chhHHHHHHHcCCCCCcEEEEeec
Q 027817 86 GESTGPLAAYYKLPLNRVLVFHDD 109 (218)
Q Consensus 86 G~aV~~~~~~~ki~~~~ilVihDD 109 (218)
|.++..+++.+++++++++.|=|.
T Consensus 153 ~~ai~~l~~~~~i~~~~v~~~GDs 176 (225)
T d1l6ra_ 153 AFAVNKLKEMYSLEYDEILVIGDS 176 (225)
T ss_dssp HHHHHHHHHHTTCCGGGEEEECCS
T ss_pred HHHHHHHhhhhccchhheeeecCC
Confidence 888999999999999999998885
No 17
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=20.30 E-value=66 Score=19.57 Aligned_cols=39 Identities=13% Similarity=0.182 Sum_probs=28.3
Q ss_pred CcCCHHHHHHHHHHHHHH-------HHHHHHHHh-cCHHHHHHhhhc
Q 027817 166 QKFNAIARERIDTALQEG-------VEVLKLLLS-KGLTESARHFNT 204 (218)
Q Consensus 166 s~f~~~E~~~l~~~i~~a-------~~~~~~~i~-~~~~~amn~~n~ 204 (218)
+++|++|.+.|.+++... .+.|...+. ...+.++++|+.
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~~~~W~~Ia~~l~gRt~~qc~~r~~~ 48 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEI 48 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCchHHHHHHHHcCCCCHHHHHHHHHH
Confidence 578999999998877652 455555553 568888888864
No 18
>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}
Probab=20.07 E-value=25 Score=26.29 Aligned_cols=24 Identities=25% Similarity=0.414 Sum_probs=22.1
Q ss_pred chhHHHHHHHcCCCCCcEEEEeec
Q 027817 86 GESTGPLAAYYKLPLNRVLVFHDD 109 (218)
Q Consensus 86 G~aV~~~~~~~ki~~~~ilVihDD 109 (218)
|.+++.+++.+++++++++++=|.
T Consensus 215 ~~ai~~l~~~~gi~~~~vi~~GD~ 238 (285)
T d1nrwa_ 215 GQALKRLAKQLNIPLEETAAVGDS 238 (285)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESS
T ss_pred hhHHHHHHhhcccCcccEEEEeCC
Confidence 888999999999999999999993
Done!