BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027819
(218 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297834764|ref|XP_002885264.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331104|gb|EFH61523.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/222 (66%), Positives = 176/222 (79%), Gaps = 7/222 (3%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDAD----PLPDS 56
+A L+RR YRSLL NP+ SQS F T+NI SSR DSD DE + +SD + P
Sbjct: 5 VATLSRRLYRSLLSNPRISQSSMSFCTNNI---SSREDSDFDELSANSDTESPIEPKASD 61
Query: 57 SPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIR 116
++ SG++R +RPLENGLD GIFKAILVGQVGQ P+QKKLKSGRTVTLFS+GTGGIR
Sbjct: 62 PVSRFSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIR 121
Query: 117 NNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
NNRRPL NE+P EYA+R AVQWHRVSVYPERL +V+K++ PG+ IY+EGNLE K+F DP
Sbjct: 122 NNRRPLINEDPREYASRSAVQWHRVSVYPERLAELVLKNVEPGTVIYLEGNLETKIFTDP 181
Query: 177 ITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
+TGLVRRIRE+AIRRNGR+VFLGK GD Q PS +E+RG GY+
Sbjct: 182 VTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 223
>gi|15229675|ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis thaliana]
gi|9294319|dbj|BAB02216.1| unnamed protein product [Arabidopsis thaliana]
gi|332642598|gb|AEE76119.1| single-strand DNA-binding protein [Arabidopsis thaliana]
Length = 217
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 144/218 (66%), Positives = 172/218 (78%), Gaps = 5/218 (2%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
MA L+RR YRSLL NP+ SQ+ F T+NI S DSD DE + S +P ++
Sbjct: 5 MATLSRRLYRSLLSNPRISQASMSFCTNNITSPE---DSDFDE--LESPIEPKASDPVSR 59
Query: 61 NSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRR 120
SG++R +RPLENGLD GIFKAILVGQVGQ P+QKKLKSGRTVTLFS+GTGGIRNNRR
Sbjct: 60 FSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRR 119
Query: 121 PLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGL 180
PL NE+P EYA+R AVQWHRVSVYPERL +V+K++ PG+ IY+EGNLE K+F DP+TGL
Sbjct: 120 PLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGL 179
Query: 181 VRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
VRRIRE+AIRRNGR+VFLGK GD Q PS +E+RG GY+
Sbjct: 180 VRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 217
>gi|449439377|ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
gi|449486863|ref|XP_004157425.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 234
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 144/234 (61%), Positives = 168/234 (71%), Gaps = 19/234 (8%)
Query: 1 MAALTRRFYRSLLLNPKFSQS----PKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDS 56
M AL+RR RSLL N K S P + T+N+ S R SD+ ES I SD DS
Sbjct: 4 MVALSRRLCRSLLSNSKASHHYDILPVTYCTNNL---SFRSVSDITESGIESDLYTELDS 60
Query: 57 SPTQNSGQQ-----------RESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTV 105
+ N R ++RPLENGLD GI+KAILVG+VGQSP+QK+LKSGRTV
Sbjct: 61 NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 120
Query: 106 TLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVE 165
TL S+GTGGIRNNRRPL NE P EYANRCAVQWHRVS+YP RLG +VMKH+VPGS +Y+E
Sbjct: 121 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 180
Query: 166 GNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKG-GDAQPPSPSEVRGAGYF 218
GNLE K+F D +TGLVRRIRE+AIR NGRLVFLGKG G+AQ +PSE RG GY+
Sbjct: 181 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 234
>gi|255541852|ref|XP_002511990.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
gi|223549170|gb|EEF50659.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
Length = 223
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/225 (63%), Positives = 173/225 (76%), Gaps = 9/225 (4%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
MA ++RR RSLL + K S+ KPF T N+ SS + D DES +SD D + SP+
Sbjct: 1 MANISRRLCRSLLSSSKISKFSKPFCTGNL--SSREEEHDSDESTHNSDTDSISTQSPSS 58
Query: 61 NSGQQ-------RESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG 113
S RE + RPLENGLD G++KAILVGQVGQSP+QKKL+SG++VT+FSLGTG
Sbjct: 59 TSSPPPPESSPQREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGKSVTMFSLGTG 118
Query: 114 GIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
GIRNNRRP++NE P EYANRCAVQWHRVSVYPERLG +VMKHL+PGS +Y+EGNLE KVF
Sbjct: 119 GIRNNRRPMQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVF 178
Query: 174 NDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
DPITGLVRRIRE+AIR++GR+VFL KGGD + S E++G GY+
Sbjct: 179 TDPITGLVRRIREVAIRQDGRIVFLAKGGDEKEASSKELKGLGYY 223
>gi|224118858|ref|XP_002317924.1| predicted protein [Populus trichocarpa]
gi|222858597|gb|EEE96144.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 172/219 (78%), Gaps = 4/219 (1%)
Query: 1 MAALTRRFYRSLLL-NPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPT 59
MA L+RR YRSLL NPK SQ PF TS+ ++++ ++L + + P ++ +
Sbjct: 5 MAVLSRRLYRSLLSSNPKISQLSMPFCTSSSTTTTTTTTNNL---SFREEDSPSSSTTTS 61
Query: 60 QNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNR 119
+ S R DRPLENGLD G++KAILVGQVGQ+P+QKKL+SGR +T+FS+GTGGIRNNR
Sbjct: 62 EGSSGSRMVQDRPLENGLDAGVYKAILVGQVGQNPLQKKLRSGREITIFSMGTGGIRNNR 121
Query: 120 RPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITG 179
RPL+NE+P EYANRCAVQWHRVSVYPERLG VVM++++PGS +YVEGNLE KVF DPITG
Sbjct: 122 RPLQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPITG 181
Query: 180 LVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
LVRRIREIA+R+NGRLVFLGKG + Q S E++G GY+
Sbjct: 182 LVRRIREIAVRQNGRLVFLGKGANDQQASSLELKGLGYY 220
>gi|225427470|ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera]
gi|296088446|emb|CBI37437.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/169 (71%), Positives = 142/169 (84%), Gaps = 1/169 (0%)
Query: 50 ADPLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFS 109
DP+ DS PT + Q R DRPLENGLD GI+KAILVG+ GQ+P+QK+L+SGR VTLFS
Sbjct: 54 VDPIADSPPTDTT-QNRMVVDRPLENGLDVGIYKAILVGKAGQTPLQKRLRSGRMVTLFS 112
Query: 110 LGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLE 169
+GTGGIRNNRRPL+NE+P EYANR AVQWHRV+VYPE LG +VMKH+ PGS +Y+EGNLE
Sbjct: 113 VGTGGIRNNRRPLDNEDPKEYANRSAVQWHRVTVYPENLGNIVMKHVSPGSVLYLEGNLE 172
Query: 170 QKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
K+F DP+TGLVRRIRE+AIRRNGRLVFLGKGGD S E++GAGY+
Sbjct: 173 TKIFTDPVTGLVRRIREVAIRRNGRLVFLGKGGDGDQASNVELKGAGYY 221
>gi|356511595|ref|XP_003524509.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Glycine max]
Length = 207
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 160/221 (72%), Gaps = 21/221 (9%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
M L+RR Y SLL P + + F T ++F DSD +AD PD P
Sbjct: 5 MMTLSRRLYCSLLRTP---NAYRHFSTDHLF------DSD--------EADSAPDP-PAP 46
Query: 61 NSGQQRESF--DRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNN 118
++ Q+ E F DRPLENGLD GI++AILVG+ GQ+P+QKKLKSG +VTL S+GTGGI NN
Sbjct: 47 DAVQEEEKFVIDRPLENGLDVGIYRAILVGKAGQAPLQKKLKSGTSVTLLSVGTGGIHNN 106
Query: 119 RRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPIT 178
RRP +ENP +YANR A+QWHRVSVYP++LG +V KH+VPGS +YVEGNLE K F DPIT
Sbjct: 107 RRPRVDENPKDYANRSAIQWHRVSVYPQKLGDLVTKHVVPGSMLYVEGNLETKCFTDPIT 166
Query: 179 GLVRRIREIAIRRNGRLVFLGKGGDAQPPS-PSEVRGAGYF 218
G+ RRIREIA+RRNGR+VFLG+GGDA+ + P ++R GY+
Sbjct: 167 GIARRIREIAVRRNGRIVFLGEGGDAELQTLPKDLRAVGYY 207
>gi|357135683|ref|XP_003569438.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 214
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 159/221 (71%), Gaps = 23/221 (10%)
Query: 4 LTRRFYRSLLLNPKF-SQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNS 62
L RRF LLL+ +F S S +PF T++ S SDA+P PD +P
Sbjct: 11 LGRRF---LLLSRRFVSSSLRPFSTNS------------SPSLAGSDAEPDPDHAPADEG 55
Query: 63 GQ-----QRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRN 117
Q + + RPLENGLDPGI+KAI+VG+VGQ P+QK+L+SG+TV LFSLGTGGIRN
Sbjct: 56 NQPPNQHRAPNTTRPLENGLDPGIYKAIMVGKVGQEPMQKRLRSGKTVVLFSLGTGGIRN 115
Query: 118 NRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPI 177
NRRPL+NE P +YA+R +VQWHRV VYPERLG + +K++ G+ +Y+EGNLE KVF+DPI
Sbjct: 116 NRRPLDNEEPHQYADRSSVQWHRVCVYPERLGSLTLKNVKIGTVLYLEGNLETKVFSDPI 175
Query: 178 TGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
TGLVRRIREIA+R NGRL+FLG+ G+A P EV+G GYF
Sbjct: 176 TGLVRRIREIAVRANGRLLFLGEDGNA--PKIGEVKGVGYF 214
>gi|194701226|gb|ACF84697.1| unknown [Zea mays]
gi|195612674|gb|ACG28167.1| single-stranded DNA-binding protein [Zea mays]
gi|414881237|tpg|DAA58368.1| TPA: single-stranded DNA-binding protein [Zea mays]
Length = 224
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 154/215 (71%), Gaps = 5/215 (2%)
Query: 4 LTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSG 63
++RRF S L + + + + F S+ S V+SDL+ AD + T NS
Sbjct: 15 MSRRFLSSPLGSLSTTTATRSFSISSPGFKSFVVESDLENEHDQPPADQ--NRQQTSNSP 72
Query: 64 QQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLE 123
+ ++ RPLENGLDPGI+KAILVG+VGQ P+QK+L+SG+TV LFSLGTGGIRNNRRPL+
Sbjct: 73 RPPDT-TRPLENGLDPGIYKAILVGKVGQEPMQKRLRSGKTVVLFSLGTGGIRNNRRPLD 131
Query: 124 NENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRR 183
E P +YA+RC+VQWHRV VYP+RLG V + ++ G+ +Y+EGNLE KVF DPITGLVRR
Sbjct: 132 REEPHQYADRCSVQWHRVCVYPDRLGTVALNNVKTGTILYLEGNLETKVFCDPITGLVRR 191
Query: 184 IREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
IREIA+R +GRL+FLG DA P EV+G GYF
Sbjct: 192 IREIAVRSSGRLLFLGN--DANAPKLGEVKGVGYF 224
>gi|115438823|ref|NP_001043691.1| Os01g0642900 [Oryza sativa Japonica Group]
gi|55297106|dbj|BAD68750.1| single-strand DNA binding protein-like [Oryza sativa Japonica
Group]
gi|113533222|dbj|BAF05605.1| Os01g0642900 [Oryza sativa Japonica Group]
gi|125571356|gb|EAZ12871.1| hypothetical protein OsJ_02792 [Oryza sativa Japonica Group]
gi|215686631|dbj|BAG88884.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215707058|dbj|BAG93518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/148 (70%), Positives = 123/148 (83%), Gaps = 2/148 (1%)
Query: 71 RPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEY 130
RPLENGLDPGI+KAI+VG+VGQ P+QK+L+SGRTV LFSLGTGGIRNNRRPL+ E P +Y
Sbjct: 79 RPLENGLDPGIYKAIMVGKVGQEPIQKRLRSGRTVVLFSLGTGGIRNNRRPLDREEPHQY 138
Query: 131 ANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
A RC+VQWHRV +YPERLG + +KH+ GS +Y+EGNLE KVF+DPITGLVRRIREIA+R
Sbjct: 139 AERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVR 198
Query: 191 RNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
NGRL+FLG D P E +G GYF
Sbjct: 199 SNGRLLFLGN--DCNAPKLGEAKGVGYF 224
>gi|125527031|gb|EAY75145.1| hypothetical protein OsI_03039 [Oryza sativa Indica Group]
Length = 224
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 103/148 (69%), Positives = 123/148 (83%), Gaps = 2/148 (1%)
Query: 71 RPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEY 130
RPLENGLDPGI+KAI+VG++GQ P+QK+L+SGRTV LFSLGTGGIRNNRRPL+ E P +Y
Sbjct: 79 RPLENGLDPGIYKAIMVGKLGQEPIQKRLRSGRTVVLFSLGTGGIRNNRRPLDREEPHQY 138
Query: 131 ANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
A RC+VQWHRV +YPERLG + +KH+ GS +Y+EGNLE KVF+DPITGLVRRIREIA+R
Sbjct: 139 AERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVR 198
Query: 191 RNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
NGRL+FLG D P E +G GYF
Sbjct: 199 SNGRLLFLGN--DCNAPKLGEAKGVGYF 224
>gi|242058153|ref|XP_002458222.1| hypothetical protein SORBIDRAFT_03g029310 [Sorghum bicolor]
gi|241930197|gb|EES03342.1| hypothetical protein SORBIDRAFT_03g029310 [Sorghum bicolor]
Length = 221
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 133/181 (73%), Gaps = 3/181 (1%)
Query: 39 SDLDESAIHSDADPLPDSSPTQNSGQQRE-SFDRPLENGLDPGIFKAILVGQVGQSPVQK 97
SD + H P D Q S + R RPLENGLDPGI+KAILVG+VGQ P+QK
Sbjct: 43 SDAESDPEHEHYQPRADQDRQQTSNRPRPPDTTRPLENGLDPGIYKAILVGKVGQEPMQK 102
Query: 98 KLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLV 157
+L++GRTV LFSLGTGGIRNNRRPL+ E P +YA+RC+VQWHRV VYPERLG + +K++
Sbjct: 103 RLRNGRTVVLFSLGTGGIRNNRRPLDREEPHQYADRCSVQWHRVCVYPERLGTLALKNVK 162
Query: 158 PGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGY 217
G+ +Y+EGNLE KVF DPITGLVRRIREIA+R GRL+FLG D P EV+G GY
Sbjct: 163 TGTVLYLEGNLETKVFCDPITGLVRRIREIAVRSTGRLLFLGN--DTNAPKLGEVKGVGY 220
Query: 218 F 218
F
Sbjct: 221 F 221
>gi|388519493|gb|AFK47808.1| unknown [Medicago truncatula]
Length = 239
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 120/190 (63%), Positives = 148/190 (77%), Gaps = 11/190 (5%)
Query: 31 FSSSSRVDSDLDESAIHSDAD-PLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQ 89
F +++ SD D DAD P SP Q +R FDRPLENGLDPG+++AILVG+
Sbjct: 59 FCTTTTSLSDYD------DADSAAPSPSPEQT---ERTFFDRPLENGLDPGVYRAILVGK 109
Query: 90 VGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLG 149
GQ P+QKKLKSG VTL S+GTGGIRNNRRPL++ENP EYANRCAVQWHRV+VYPERLG
Sbjct: 110 AGQKPLQKKLKSGTVVTLLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLG 169
Query: 150 GVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGD-AQPPS 208
++MK ++PGST+YVEGNLE KVF+DP+TGLVRR+RE+A+RRNGR+VFLG G D Q
Sbjct: 170 NLLMKTVLPGSTLYVEGNLETKVFSDPVTGLVRRVREVAVRRNGRVVFLGPGDDPKQQTQ 229
Query: 209 PSEVRGAGYF 218
+++R GY+
Sbjct: 230 QNDLRAVGYY 239
>gi|226496599|ref|NP_001151839.1| single-stranded DNA-binding protein [Zea mays]
gi|195650155|gb|ACG44545.1| single-stranded DNA-binding protein [Zea mays]
Length = 224
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 134/180 (74%), Gaps = 8/180 (4%)
Query: 45 AIHSDADPLPDSSPTQNSGQQRES------FDRPLENGLDPGIFKAILVGQVGQSPVQKK 98
+ SD + D P + QQ + RPLENGLDPGI+KAILVG+VGQ P+QK+
Sbjct: 47 VVESDLENEQDQRPADQNRQQTSNSPRPPDTTRPLENGLDPGIYKAILVGKVGQEPMQKR 106
Query: 99 LKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVP 158
L+SG+TV LFSLGTGGIRNNRRPL+ E P +YA+RC+VQWHRV VYP+RLG V + ++
Sbjct: 107 LRSGKTVVLFSLGTGGIRNNRRPLDREEPHQYADRCSVQWHRVCVYPDRLGTVALNNVKT 166
Query: 159 GSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVRGAGYF 218
G+ +Y+EGNLE KVF DPITGLVRRIREIA+R +GRL+FLG DA P EV+G GYF
Sbjct: 167 GTILYLEGNLETKVFCDPITGLVRRIREIAVRSSGRLLFLGN--DANAPKLGEVKGVGYF 224
>gi|357477593|ref|XP_003609082.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355510137|gb|AES91279.1| Single-stranded DNA-binding protein [Medicago truncatula]
Length = 239
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/190 (63%), Positives = 148/190 (77%), Gaps = 11/190 (5%)
Query: 31 FSSSSRVDSDLDESAIHSDAD-PLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQ 89
F +++ SD D DAD P SP Q +R FDRPLENGLDPG+++AILVG+
Sbjct: 59 FCTTTTSLSDYD------DADSAAPSPSPEQT---ERTFFDRPLENGLDPGVYRAILVGK 109
Query: 90 VGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLG 149
GQ P+QKKLKSG VTL S+GTGGIRNNRRPL++ENP EYANRCAVQWHRV+VYPERLG
Sbjct: 110 AGQKPLQKKLKSGTVVTLLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLG 169
Query: 150 GVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGD-AQPPS 208
++MK ++PGST+YVEGNLE KVF+DP+TGLVRR+RE+A+RRNGR+VFLG G D Q
Sbjct: 170 NLLMKTVLPGSTLYVEGNLETKVFSDPVTGLVRRVREVAVRRNGRVVFLGPGDDPKQQTQ 229
Query: 209 PSEVRGAGYF 218
+++R GY+
Sbjct: 230 QNDLRAVGYY 239
>gi|357477659|ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355510170|gb|AES91312.1| Single-stranded DNA-binding protein [Medicago truncatula]
Length = 253
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/188 (63%), Positives = 146/188 (77%), Gaps = 11/188 (5%)
Query: 31 FSSSSRVDSDLDESAIHSDAD-PLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQ 89
F +++ SD D DAD P SP Q +R FDRPLENGLDPG+++AILVG+
Sbjct: 59 FCTTTTSLSDYD------DADSAAPSPSPEQT---ERTFFDRPLENGLDPGVYRAILVGK 109
Query: 90 VGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLG 149
GQ P+QKKLKSG VTL S+GTGGIRNNRRPL++ENP EYANRCAVQWHRV+VYPERLG
Sbjct: 110 AGQKPLQKKLKSGTVVTLLSIGTGGIRNNRRPLDHENPREYANRCAVQWHRVTVYPERLG 169
Query: 150 GVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGD-AQPPS 208
++MK ++PGST+YVEGNLE KVF+DP+TGLVRR+RE+A+RRNGR+VFLG G D Q
Sbjct: 170 NLLMKTVLPGSTLYVEGNLETKVFSDPVTGLVRRVREVAVRRNGRVVFLGPGDDPKQQTQ 229
Query: 209 PSEVRGAG 216
+++R G
Sbjct: 230 QNDLRAVG 237
>gi|116788306|gb|ABK24831.1| unknown [Picea sitchensis]
Length = 223
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 119/146 (81%)
Query: 73 LENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYAN 132
++N D GI++AIL+G+VGQ PVQK+L+SGR +T+FS+GTGG+ NNRRPLE+E+P EYA+
Sbjct: 78 IQNSPDLGIYRAILLGEVGQLPVQKRLRSGRVITMFSVGTGGMHNNRRPLEDESPREYAD 137
Query: 133 RCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRN 192
R VQWHRVS+Y + LGG+ M+HL G+ +Y+EGNLE K+F+DPITGLV+R+REIAIRR
Sbjct: 138 RSMVQWHRVSIYADNLGGIAMQHLKQGAHVYLEGNLETKIFSDPITGLVKRVREIAIRRQ 197
Query: 193 GRLVFLGKGGDAQPPSPSEVRGAGYF 218
GRL+FL G ++ S ++G GYF
Sbjct: 198 GRLIFLNDGNESTDKSQQSLKGVGYF 223
>gi|147819885|emb|CAN67299.1| hypothetical protein VITISV_002040 [Vitis vinifera]
Length = 122
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/117 (71%), Positives = 101/117 (86%), Gaps = 2/117 (1%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AILVG+ GQ+P+QK+L+SGR VTLFS+GTGGIRNNRRPL+NE+P EYANR AVQWHRV+V
Sbjct: 2 AILVGKAGQTPLQKRLRSGRMVTLFSVGTGGIRNNRRPLDNEDPKEYANRSAVQWHRVTV 61
Query: 144 YPERLGGVVMKHLVPG--STIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
YPE LG +VMKH+ PG S +Y+EGNLE K+F DP+TGLVRRIRE+AIRRNG +
Sbjct: 62 YPENLGNIVMKHVSPGLSSVLYLEGNLETKIFTDPVTGLVRRIREVAIRRNGTFMIF 118
>gi|168046407|ref|XP_001775665.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672938|gb|EDQ59468.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 92/115 (80%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AIL+G+VGQ+P QK LKSGR VT+FS+GTGG+ NR+ L+ E P E+A R ++QWHR++V
Sbjct: 1 AILLGKVGQAPAQKVLKSGRAVTIFSVGTGGMHLNRKMLDGETPEEFAERSSIQWHRIAV 60
Query: 144 YPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
Y ER+G ++++ + GS +YVEGN+E +++NDP T V+RIREIA+R+NG L+ L
Sbjct: 61 YQERIGQLILRSMKQGSQVYVEGNIETRIYNDPNTQQVKRIREIAVRQNGILMLL 115
>gi|168004403|ref|XP_001754901.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694005|gb|EDQ80355.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 126
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 91/115 (79%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
+AIL+G+VGQ+P QK LKSGR VT+FS+GTGG+ NRR + E P E+A R +QWHRV+
Sbjct: 1 QAILLGEVGQAPAQKILKSGRAVTVFSVGTGGMHLNRRMFDGETPEEFAERSNMQWHRVA 60
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVF 197
VY E++G ++++ + G+ +YVEGN+E +V+ DP+T V+RIREIA+R+NGR++
Sbjct: 61 VYQEKVGNLILRSMKQGAQVYVEGNMETRVYTDPVTQQVKRIREIAVRQNGRVLL 115
>gi|168022770|ref|XP_001763912.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684917|gb|EDQ71316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 85/110 (77%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AIL+G+VGQ+P QK LKSGR VT+FS+GTGG+ NRR + E E+A R +QWHRV+V
Sbjct: 1 AILLGEVGQAPSQKVLKSGRAVTIFSVGTGGMHLNRRMFDGETLEEFAERSNMQWHRVAV 60
Query: 144 YPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
Y E +G ++++ + GS +YVEGN+E +++NDP T V+RIREIA+R+NG
Sbjct: 61 YQEHIGHLILRSMKQGSQVYVEGNIETRIYNDPNTQKVKRIREIAVRQNG 110
>gi|302821151|ref|XP_002992240.1| hypothetical protein SELMODRAFT_448693 [Selaginella moellendorffii]
gi|300140007|gb|EFJ06737.1| hypothetical protein SELMODRAFT_448693 [Selaginella moellendorffii]
Length = 210
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 97/149 (65%), Gaps = 5/149 (3%)
Query: 48 SDADPLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTL 107
+D D + P + ++ F P + PGI+KAILVG VGQ PV++ + +V +
Sbjct: 62 ADTDE-EEPHPQETKYMKKAVFASP-DKYYGPGIYKAILVGSVGQKPVERVFATNVSVVI 119
Query: 108 FSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVM-KHLVPGSTIYVEG 166
FSLGTGG+RNNR+ LE E+ YA R QWHRV V+ +LG + M + L G+ +Y+EG
Sbjct: 120 FSLGTGGLRNNRKQLEGEHWETYAERSFTQWHRVCVF--KLGLLDMARKLTKGNNVYLEG 177
Query: 167 NLEQKVFNDPITGLVRRIREIAIRRNGRL 195
++E +V++D +TG ++R+REI +R+ GRL
Sbjct: 178 SIETRVYSDAVTGALKRVREICVRQCGRL 206
>gi|326500314|dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 107/195 (54%), Gaps = 28/195 (14%)
Query: 27 TSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLE-NGLDP------ 79
TS +SS+ SD+DE D L DS R LE +DP
Sbjct: 28 TSRAWSSTVSF-SDIDEKDDMGDDGDLKDSR-------------RELEPQSVDPKKGWGF 73
Query: 80 -GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ +AI+ G+VGQ+PVQK L++GRTVT+F++GTGG+ + R + P QW
Sbjct: 74 RGVHRAIICGKVGQAPVQKILRNGRTVTIFTIGTGGMFDQRVIGSADTPK------PAQW 127
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HR++V+ E LG ++ LV S +Y+EG++E +++ND I G VR I EI IR +G++ +
Sbjct: 128 HRIAVHSEHLGAYAVQKLVKNSAVYIEGDIETRIYNDGIDGQVRNIPEICIRGDGKIRLV 187
Query: 199 GKGGDAQPPSPSEVR 213
G A S E+R
Sbjct: 188 KSGESAANISLDELR 202
>gi|449485644|ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 118/204 (57%), Gaps = 20/204 (9%)
Query: 20 QSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRE--SFDRPLE-NG 76
++P F ++ F +S++ +S S S+ D + +N G++ + +F L+ G
Sbjct: 13 RTPSSNFPTSSFVASAQTNSKFWLSTGASEGD----NDVEKNDGEEDDYDTFSNELQPQG 68
Query: 77 LDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTE 129
+DP G+ KAI+ G+VGQ+PVQK L++GRT+T+F++GTGG+ + R + P
Sbjct: 69 VDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIFDGRDLPK- 127
Query: 130 YANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
QWHR++V+ E LG ++ L +++YVEG++E +V+ND I G V+ I EI +
Sbjct: 128 -----PAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNIPEICV 182
Query: 190 RRNGRLVFLGKGGDAQPPSPSEVR 213
RR+G L L G A S +++
Sbjct: 183 RRDGTLRLLKPGESASNISLDDLK 206
>gi|115464809|ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|48475206|gb|AAT44275.1| putative single-strand DNA binding protein [Oryza sativa Japonica
Group]
gi|113579555|dbj|BAF17918.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|215706976|dbj|BAG93436.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 206
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 117/221 (52%), Gaps = 27/221 (12%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
M +L+ + L + + P F+ + SS+ SD+DE + D DS
Sbjct: 1 MNSLSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGDDDYTDSR--- 57
Query: 61 NSGQQRESFDRPLE-NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGT 112
R LE +DP G+ +AI+ G+VGQ PVQK L++GRTVT+F++GT
Sbjct: 58 ----------RELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGT 107
Query: 113 GGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKV 172
GG+ + R + + P QWHR++++ ++LG ++ LV S +YVEG++E +V
Sbjct: 108 GGMFDQRVVGDADLPK------PAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRV 161
Query: 173 FNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVR 213
+ND I V+ I EI +RR+G++ + G A S E+R
Sbjct: 162 YNDSINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELR 202
>gi|449435603|ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 117/204 (57%), Gaps = 20/204 (9%)
Query: 20 QSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRE--SFDRPLE-NG 76
++P F ++ F +S++ S S S+ D + +N G++ + +F L+ G
Sbjct: 13 RTPSSNFPTSSFVASAQTSSKFWLSTGASEGD----NDVEKNDGEEDDYDTFSNELQPQG 68
Query: 77 LDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTE 129
+DP G+ KAI+ G+VGQ+PVQK L++GRT+T+F++GTGG+ + R + P
Sbjct: 69 VDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYDQRIFDGRDLPK- 127
Query: 130 YANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
QWHR++V+ E LG ++ L +++YVEG++E +V+ND I G V+ I EI +
Sbjct: 128 -----PAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKNIPEICV 182
Query: 190 RRNGRLVFLGKGGDAQPPSPSEVR 213
RR+G L L G A S +++
Sbjct: 183 RRDGTLRLLKPGESASNISLDDLK 206
>gi|218197079|gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indica Group]
gi|222632182|gb|EEE64314.1| hypothetical protein OsJ_19151 [Oryza sativa Japonica Group]
Length = 245
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 117/221 (52%), Gaps = 27/221 (12%)
Query: 1 MAALTRRFYRSLLLNPKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQ 60
M +L+ + L + + P F+ + SS+ SD+DE + D DS
Sbjct: 40 MNSLSNGLLKGLRRVLEQQRKPIDFYRKSQAWSSTVSFSDIDEKSEMGGDDDYTDSR--- 96
Query: 61 NSGQQRESFDRPLE-NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGT 112
R LE +DP G+ +AI+ G+VGQ PVQK L++GRTVT+F++GT
Sbjct: 97 ----------RELEPQSVDPKKGWGFRGVHRAIICGKVGQVPVQKILRNGRTVTVFTVGT 146
Query: 113 GGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKV 172
GG+ + R + + P QWHR++++ ++LG ++ LV S +YVEG++E +V
Sbjct: 147 GGMFDQRVVGDADLPK------PAQWHRIAIHNDQLGAFAVQKLVKNSAVYVEGDIETRV 200
Query: 173 FNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVR 213
+ND I V+ I EI +RR+G++ + G A S E+R
Sbjct: 201 YNDSINDQVKNIPEICLRRDGKIRLIKSGESAASISLDELR 241
>gi|255576768|ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
gi|223531260|gb|EEF33103.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
Length = 213
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 91/145 (62%), Gaps = 13/145 (8%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ KAI+ G+VGQ+PVQK L++GRTVT+F++GTGG+ + R + P
Sbjct: 71 GVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIVGAKDLPK 130
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
QWHR++V+ E LG ++ L S++YVEG +E +V+ND I+G V+ I EI
Sbjct: 131 ------PAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVKNIPEIC 184
Query: 189 IRRNGRLVFLGKGGDAQPPSPSEVR 213
IRR+G++ + G + S ++R
Sbjct: 185 IRRDGKIRLVTSGKNVSDISFDDLR 209
>gi|357133060|ref|XP_003568146.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 86/134 (64%), Gaps = 6/134 (4%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ +AIL G+VGQ PVQK L++GRT+T+F++GTGG+ + R + P QWH
Sbjct: 74 GVHRAILCGKVGQVPVQKILRNGRTITVFTIGTGGMFDQRVVESADVPK------PAQWH 127
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R++V+ E+LG ++ LV S +Y+EG++E +V+ND I V+ I EI IRR+G++ +
Sbjct: 128 RIAVHNEQLGAYAVQKLVKNSAVYIEGDIETRVYNDSINDQVKNIPEICIRRDGKIRLVK 187
Query: 200 KGGDAQPPSPSEVR 213
G A S E+R
Sbjct: 188 SGESASSISLDELR 201
>gi|302800912|ref|XP_002982213.1| hypothetical protein SELMODRAFT_115961 [Selaginella moellendorffii]
gi|300150229|gb|EFJ16881.1| hypothetical protein SELMODRAFT_115961 [Selaginella moellendorffii]
Length = 122
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 80/113 (70%), Gaps = 3/113 (2%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AILVG VGQ PV++ + +V +FSLGTGG+RNNR+ LE E+ YA R QWHRV V
Sbjct: 1 AILVGSVGQKPVERVFATNVSVVIFSLGTGGLRNNRKQLEGEHWETYAERSFTQWHRVCV 60
Query: 144 YPERLGGVVM-KHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRL 195
+ +LG + M + L G+ +Y+EG++E +V++D +TG ++R+REI +R+ G L
Sbjct: 61 F--KLGLLDMARKLTKGTNVYLEGSIETRVYSDAVTGALKRVREICVRQCGEL 111
>gi|356535041|ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Glycine max]
Length = 217
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 101/180 (56%), Gaps = 29/180 (16%)
Query: 52 PLPDSSPTQNSGQQRESFDRPLEN-----------GLDP-------GIFKAILVGQVGQS 93
PLPD N ++E+ D ++ G+DP G+ KAI+ G+VGQ+
Sbjct: 45 PLPD-----NDAPKKEALDEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQA 99
Query: 94 PVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVM 153
PVQK L++GR +T+F++GTGG+ + R + P QWHR++V+ + LG +
Sbjct: 100 PVQKILRNGRNITIFTVGTGGMFDQRIQGPKDLPK------PAQWHRIAVHNDILGTYAV 153
Query: 154 KHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVR 213
+ L S++YVEG++E +V+ND I G V+ I EI +RR+GR+ + G S E+R
Sbjct: 154 QQLFKNSSVYVEGDIETRVYNDSINGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELR 213
>gi|357441825|ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355480238|gb|AES61441.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|388493454|gb|AFK34793.1| unknown [Medicago truncatula]
Length = 212
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 24/171 (14%)
Query: 61 NSGQQRESFDRPLEN-----------GLDP-------GIFKAILVGQVGQSPVQKKLKSG 102
N+G +E D ++ G+DP G+ KAI+ G+VGQ+PVQK L++G
Sbjct: 44 NNGLNKEELDDEFDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNG 103
Query: 103 RTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTI 162
+ VT+F++GTGG+ + R + P QWHR++V+ E LG ++ L S++
Sbjct: 104 KNVTIFTVGTGGMYDQRIVGSKDLPK------PAQWHRIAVHNEVLGAYAVQQLFKNSSV 157
Query: 163 YVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVR 213
YVEG +E +V+ND I G V+ I EI +RR+G+L + G S E R
Sbjct: 158 YVEGEIETRVYNDSINGEVKSIPEICVRRDGKLRLIRSGESVDKTSLDEFR 208
>gi|225450667|ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera]
gi|296089740|emb|CBI39559.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 112 bits (281), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 94/145 (64%), Gaps = 14/145 (9%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ KAI+ G+VGQ+PVQK L++GRTVT+F++GTGG+ + R + ++
Sbjct: 66 GVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQR--IGGKDLP 123
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
+ A QWHR++V+ E LG ++ LV S++YVEG++E +V+ND I G V+ + EI
Sbjct: 124 KPA-----QWHRIAVHNEPLGAYAVQQLVKNSSVYVEGDIEVRVYNDSINGEVKHVPEIC 178
Query: 189 IRRNGRLVFLGKGGDAQPPSPSEVR 213
IRR+GR+ + G S E+R
Sbjct: 179 IRRDGRIRLIKTGESISNISVDELR 203
>gi|124359154|gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]
Length = 216
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 94/169 (55%), Gaps = 24/169 (14%)
Query: 61 NSGQQRESFDRPLEN-----------GLDP-------GIFKAILVGQVGQSPVQKKLKSG 102
N+G +E D ++ G+DP G+ KAI+ G+VGQ+PVQK L++G
Sbjct: 44 NNGLNKEELDDEFDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNG 103
Query: 103 RTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTI 162
+ VT+F++GTGG+ + R + P QWHR++V+ E LG ++ L S++
Sbjct: 104 KNVTIFTVGTGGMYDQRIVGSKDLPK------PAQWHRIAVHNEVLGAYAVQQLFKNSSV 157
Query: 163 YVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSE 211
YVEG +E +V+ND I G V+ I EI +RR+G+L + G S E
Sbjct: 158 YVEGEIETRVYNDSINGEVKSIPEICVRRDGKLRLIRSGESVDKTSLDE 206
>gi|222628688|gb|EEE60820.1| hypothetical protein OsJ_14429 [Oryza sativa Japonica Group]
Length = 245
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 21/198 (10%)
Query: 16 PKFSQSPKPFFTSNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLEN 75
P+ ++ K + S ++S++ SD+DE + G + F +
Sbjct: 65 PRTAKKLKFYRKSQAWNSTASF-SDVDEK--------------NRKGGDAEDDFTHSRPD 109
Query: 76 GLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCA 135
+ G+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R P
Sbjct: 110 HVFRGVHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRTVGAENLPM------P 163
Query: 136 VQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRL 195
QWHR+SV+ E+LG ++ LV S +YVEG++E +V+ND I V+ I EI +RR+G++
Sbjct: 164 AQWHRISVHNEQLGAFAVQKLVKNSAVYVEGDIETRVYNDRINDQVKNIPEICVRRDGKI 223
Query: 196 VFLGKGGDAQPPSPSEVR 213
+ G S E+R
Sbjct: 224 QLMQSGDSNVGKSLEELR 241
>gi|224125080|ref|XP_002319495.1| predicted protein [Populus trichocarpa]
gi|222857871|gb|EEE95418.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 92/145 (63%), Gaps = 13/145 (8%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ +AI+ G+VGQ+PVQK L++GRTVT+F++GTGG+ + R + P
Sbjct: 72 GVDPRKGWEFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIIGSKDLPK 131
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
QWHR++V+ + LG ++ L S++YVEG++E +V+ND I+G V+ I EI
Sbjct: 132 ------PAQWHRIAVHNDSLGAYAVQQLAKNSSVYVEGDIEIRVYNDSISGEVKNIPEIC 185
Query: 189 IRRNGRLVFLGKGGDAQPPSPSEVR 213
+RR+G++ + G + S ++R
Sbjct: 186 VRRDGKIRLIRSGENISNISFEDLR 210
>gi|388505152|gb|AFK40642.1| unknown [Lotus japonicus]
Length = 220
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 24/171 (14%)
Query: 61 NSGQQRESFDRPLEN-----------GLDP-------GIFKAILVGQVGQSPVQKKLKSG 102
N G E D +++ G+DP G+ KAI+ G+VGQ+PVQK L++G
Sbjct: 52 NGGLNNEELDEEIDDFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNG 111
Query: 103 RTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTI 162
+ VT+F++GTGG+ + R + P QWHR++V+ + LG ++ + S++
Sbjct: 112 KNVTIFTVGTGGMSDQRIVGARDMPK------PPQWHRIAVHNDVLGAYAVQQICKNSSV 165
Query: 163 YVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGGDAQPPSPSEVR 213
YVEG++E +V+ND I G V+ I EI +RR+G++ + G A S E+R
Sbjct: 166 YVEGDIETRVYNDSINGEVKSIPEICVRRDGKIRLIKSGESADKISLDELR 216
>gi|351727395|ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycine max]
gi|255627623|gb|ACU14156.1| unknown [Glycine max]
Length = 236
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 89/145 (61%), Gaps = 13/145 (8%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ KAI+ G+VGQ+PVQK L++GR +T+F++GTGG+ + R + P
Sbjct: 74 GVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVGTGGMFDQRIQGPKDLPK 133
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
QWHR++V+ + LG ++ L S++YVEG++E +V+ND I G V+ I EI
Sbjct: 134 ------PAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSINGEVKSIPEIC 187
Query: 189 IRRNGRLVFLGKGGDAQPPSPSEVR 213
+RR+G++ + G S E+R
Sbjct: 188 VRRDGKICLIKSGESIDKTSLDELR 212
>gi|238006070|gb|ACR34070.1| unknown [Zea mays]
gi|238006582|gb|ACR34326.1| unknown [Zea mays]
gi|413945982|gb|AFW78631.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
gi|413945983|gb|AFW78632.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 206
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 103/193 (53%), Gaps = 19/193 (9%)
Query: 28 SNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDP-------G 80
S F SRV S + SD D D NS + RP G+DP G
Sbjct: 22 STAFCRQSRVSS---STVSFSDLDEKGDMEYDDNSPNSKREL-RP--QGVDPNKGWEFRG 75
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R + P QWHR
Sbjct: 76 VHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPK------PAQWHR 129
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
++V+ + L ++ LV S +YVEG++E +V+ND + V+ I EI +RR+G++ +
Sbjct: 130 IAVHNDYLSAYAVQKLVKNSAVYVEGDIETRVYNDSVNDQVKNIPEICVRRDGKIQLVKS 189
Query: 201 GGDAQPPSPSEVR 213
G A S E+R
Sbjct: 190 GDSAANISLDELR 202
>gi|116784739|gb|ABK23454.1| unknown [Picea sitchensis]
gi|224286177|gb|ACN40799.1| unknown [Picea sitchensis]
Length = 207
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 88/130 (67%), Gaps = 13/130 (10%)
Query: 76 GLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
G+DP G+ KAI+ G+VGQ+PVQK L++GRTVT+F++GT G+ + R +++
Sbjct: 64 GVDPKKGWGFRGVHKAIICGKVGQTPVQKILRNGRTVTIFTVGTAGMFDQRTAGMDKSTR 123
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
+QWHR++V+ E LG V++ L+ +++YVEG++E +V+ND I G V+ + EI
Sbjct: 124 ------PIQWHRIAVHNEPLGAYVVQQLIKDASVYVEGDIETRVYNDNINGTVKHVPEIC 177
Query: 189 IRRNGRLVFL 198
+RR+G++ +
Sbjct: 178 VRRDGKVHLI 187
>gi|413945984|gb|AFW78633.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 223
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 102/192 (53%), Gaps = 19/192 (9%)
Query: 28 SNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDP-------G 80
S F SRV S + SD D D NS + RP G+DP G
Sbjct: 22 STAFCRQSRVSS---STVSFSDLDEKGDMEYDDNSPNSKREL-RP--QGVDPNKGWEFRG 75
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R + P QWHR
Sbjct: 76 VHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPK------PAQWHR 129
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
++V+ + L ++ LV S +YVEG++E +V+ND + V+ I EI +RR+G++ +
Sbjct: 130 IAVHNDYLSAYAVQKLVKNSAVYVEGDIETRVYNDSVNDQVKNIPEICVRRDGKIQLVKS 189
Query: 201 GGDAQPPSPSEV 212
G A S E+
Sbjct: 190 GDSAANISLDEL 201
>gi|30681642|ref|NP_192844.2| Single-stranded DNA-binding protein [Arabidopsis thaliana]
gi|38258307|sp|Q84J78.1|SSB_ARATH RecName: Full=Single-stranded DNA-binding protein, mitochondrial;
Flags: Precursor
gi|28393531|gb|AAO42186.1| unknown protein [Arabidopsis thaliana]
gi|28827408|gb|AAO50548.1| unknown protein [Arabidopsis thaliana]
gi|34556071|emb|CAE46651.1| single-stranded DNA binding protein [Arabidopsis thaliana]
gi|332657567|gb|AEE82967.1| Single-stranded DNA-binding protein [Arabidopsis thaliana]
Length = 201
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 90/146 (61%), Gaps = 13/146 (8%)
Query: 75 NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENP 127
+G+DP G+ +AI+ G+VGQ+P+QK L++GRTVT+F++GTGG+ + R P
Sbjct: 58 HGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQP 117
Query: 128 TEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI
Sbjct: 118 K------PAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 171
Query: 188 AIRRNGRLVFLGKGGDAQPPSPSEVR 213
+RR+G++ + G S E++
Sbjct: 172 CVRRDGKIRMIKYGESISKISFDELK 197
>gi|297813577|ref|XP_002874672.1| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
gi|297320509|gb|EFH50931.1| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 201
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 90/146 (61%), Gaps = 13/146 (8%)
Query: 75 NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENP 127
+G+DP G+ +AI+ G+VGQ+P+QK L++GRTVT+F++GTGG+ + R P
Sbjct: 58 HGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQP 117
Query: 128 TEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI
Sbjct: 118 K------PAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 171
Query: 188 AIRRNGRLVFLGKGGDAQPPSPSEVR 213
+RR+G++ + G S E++
Sbjct: 172 CVRRDGKIRLIKYGESISKISFDELK 197
>gi|4850285|emb|CAB43041.1| putative protein [Arabidopsis thaliana]
gi|7267804|emb|CAB81207.1| putative protein [Arabidopsis thaliana]
Length = 254
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 84/131 (64%), Gaps = 13/131 (9%)
Query: 75 NGLDP-------GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENP 127
+G+DP G+ +AI+ G+VGQ+P+QK L++GRTVT+F++GTGG+ + R P
Sbjct: 58 HGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQP 117
Query: 128 TEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI
Sbjct: 118 K------PAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEI 171
Query: 188 AIRRNGRLVFL 198
+RR+G V +
Sbjct: 172 CVRRDGMYVHI 182
>gi|357136675|ref|XP_003569929.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 151
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 82/134 (61%), Gaps = 6/134 (4%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ +AI+ G VGQ PVQK L++G TVT+F++GTGG+ + RR P QWH
Sbjct: 20 GVHRAIICGNVGQVPVQKILRNGHTVTVFTVGTGGMFDQRRVGAENLPV------PAQWH 73
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R++V+ E LG ++ LV + +YVEG++E +V+ND I ++ I EI +RR+G++ +
Sbjct: 74 RIAVHNEHLGTYAVQKLVKNAAVYVEGDIETRVYNDRINNQLKNIPEICVRRDGKIHLVQ 133
Query: 200 KGGDAQPPSPSEVR 213
G S E+R
Sbjct: 134 SGDSDVSKSLEELR 147
>gi|115457904|ref|NP_001052552.1| Os04g0363700 [Oryza sativa Japonica Group]
gi|113564123|dbj|BAF14466.1| Os04g0363700, partial [Oryza sativa Japonica Group]
Length = 111
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R P QWHR+SV
Sbjct: 1 AIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRTVGAENLPM------PAQWHRISV 54
Query: 144 YPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG 193
+ E+LG ++ LV S +YVEG++E +V+ND I V+ I EI +RR+G
Sbjct: 55 HNEQLGAFAVQKLVKNSAVYVEGDIETRVYNDRINDQVKNIPEICVRRDG 104
>gi|302773852|ref|XP_002970343.1| hypothetical protein SELMODRAFT_411277 [Selaginella moellendorffii]
gi|300161859|gb|EFJ28473.1| hypothetical protein SELMODRAFT_411277 [Selaginella moellendorffii]
Length = 192
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G++KA++VG++ Q P + LK+G + + TGG+R ++ PT+ Q H
Sbjct: 65 GVYKAVIVGELTQPPAELVLKNGNAIVTLMVATGGLRVQKKL---NAPTK-------QIH 114
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
+V VY RL + + G IY+EGN+E +VFNDP+TG V+ REI++R+NGRL L
Sbjct: 115 KVVVYHRRLKDLAT-QIKKGQQIYLEGNMESRVFNDPVTGAVKLSREISVRQNGRLFML 172
>gi|302769376|ref|XP_002968107.1| hypothetical protein SELMODRAFT_440287 [Selaginella moellendorffii]
gi|300163751|gb|EFJ30361.1| hypothetical protein SELMODRAFT_440287 [Selaginella moellendorffii]
Length = 192
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G++KA++VG++ Q P + LK+G + + TGG+R ++ PT+ Q H
Sbjct: 65 GVYKAVIVGELTQPPAELVLKNGNAIVTLMVATGGLRVQKKL---NAPTK-------QIH 114
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
+V VY RL + + G IY+EGN+E +VFNDP+TG V+ REI++R+NGRL L
Sbjct: 115 KVVVYHRRLKDLAT-QIKKGQQIYLEGNMESRVFNDPVTGAVKLSREISVRQNGRLFML 172
>gi|194694908|gb|ACF81538.1| unknown [Zea mays]
gi|413945980|gb|AFW78629.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
gi|413945981|gb|AFW78630.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 189
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 91/193 (47%), Gaps = 36/193 (18%)
Query: 28 SNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDP-------G 80
S F SRV S + SD D D NS + RP G+DP G
Sbjct: 22 STAFCRQSRVSS---STVSFSDLDEKGDMEYDDNSPNSKREL-RP--QGVDPNKGWEFRG 75
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R + P QWHR
Sbjct: 76 VHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPK------PAQWHR 129
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
++V+ + L ++ LV K ND V+ I EI +RR+G++ +
Sbjct: 130 IAVHNDYLSAYAVQKLV-------------KNVNDQ----VKNIPEICVRRDGKIQLVKS 172
Query: 201 GGDAQPPSPSEVR 213
G A S E+R
Sbjct: 173 GDSAANISLDELR 185
>gi|300724293|ref|YP_003713611.1| single-stranded DNA-binding protein [Xenorhabdus nematophila ATCC
19061]
gi|297630828|emb|CBJ91497.1| single-stranded DNA-binding protein [Xenorhabdus nematophila ATCC
19061]
Length = 170
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L +G TVT SL T +++ E TE WH
Sbjct: 5 GINKVILVGYLGQDPEIRYLPTGGTVTTLSLATSENWKDKQTGELREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG + LG
Sbjct: 57 RVVIFG-KLAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGSMQMLG 114
Query: 200 KGGDAQPPSPSEV 212
GD++ +P +
Sbjct: 115 SRGDSKRAAPQQA 127
>gi|238006822|gb|ACR34446.1| unknown [Zea mays]
gi|413945979|gb|AFW78628.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 151
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 28 SNIFSSSSRVDSDLDESAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDP-------G 80
S F SRV S + SD D D NS + RP G+DP G
Sbjct: 22 STAFCRQSRVSS---STVSFSDLDEKGDMEYDDNSPNSKREL-RP--QGVDPNKGWEFRG 75
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ +AI+ G+VGQ PVQK L++G TVT+F++GTGG+ + R + P QWHR
Sbjct: 76 VHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPK------PAQWHR 129
Query: 141 VSVYPERLGGVVMKHLV 157
++V+ + L ++ LV
Sbjct: 130 IAVHNDYLSAYAVQKLV 146
>gi|227206178|dbj|BAH57144.1| AT4G11060 [Arabidopsis thaliana]
Length = 97
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%)
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLV 196
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI +RR+G++
Sbjct: 17 QWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIR 76
Query: 197 FLGKGGDAQPPSPSEVR 213
+ G S E++
Sbjct: 77 MIKYGESISKISFDELK 93
>gi|354595425|ref|ZP_09013453.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
gi|353671192|gb|EHD12903.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
Length = 161
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 17/143 (11%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + G + +L T N+++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRTTDQGTKIVNLTLATSETWNDKQTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
V V+ ERL V K+L G I+VEG L+ + +ND G+ R + E+ + R G LV L
Sbjct: 57 VVVFNERLADVAEKYLRKGRKIFVEGVLKTRKWNDS-QGVERYVTEVVLDRFRGELVLLD 115
Query: 199 ------GKGGDAQPPSPSEVRGA 215
G+ +QP + + A
Sbjct: 116 SQNSGEGQSEQSQPTTRHRAKDA 138
>gi|217978382|ref|YP_002362529.1| single-strand binding protein [Methylocella silvestris BL2]
gi|217503758|gb|ACK51167.1| single-strand binding protein [Methylocella silvestris BL2]
Length = 168
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P +++ SG V FSL T ++ E ++ TE WH
Sbjct: 5 VNKVILIGNLGRDPETRRMNSGDAVVSFSLATTDSWRDKATGERKDRTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
+ ++ E LG + ++ GS +YVEG L+ + + D G R++ EI ++R G L L
Sbjct: 57 IVIFNENLGKIADQYCKKGSKVYVEGQLQTREYTDK-DGNQRKVTEIVLQRFRGELTLLD 115
Query: 200 KGG 202
G
Sbjct: 116 SRG 118
>gi|78484672|ref|YP_390597.1| single-strand binding protein [Thiomicrospira crunogena XCL-2]
gi|78362958|gb|ABB40923.1| single-strand binding protein [Thiomicrospira crunogena XCL-2]
Length = 201
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G + ++ T N++ + + TE WH
Sbjct: 4 GVNKVILVGTLGRDPEIKYAANGNAIANLNVATSEQWNDKASGQKQEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D TG R E+ I NG++ LG
Sbjct: 56 RVVIFG-KLAEIAGQYLTKGSQVYLEGKLQTRKWQDQNTGQDRYSTEVVIDFNGQMQMLG 114
Query: 200 KGGDAQPPSPSEVRGAGY 217
G +P + +G+
Sbjct: 115 GGNRQGSDAPFDNNASGF 132
>gi|300724464|ref|YP_003713785.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
gi|297631002|emb|CBJ91684.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
Length = 170
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L +G TV SL T +++ E TE WH
Sbjct: 5 GINKVILVGFLGQEPEIRYLPTGGTVATLSLATSENWKDKQTGELREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG + LG
Sbjct: 57 RVVIFG-KLAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGSMQMLG 114
Query: 200 KGGDAQPPSPSEV 212
GD++ +P +
Sbjct: 115 SRGDSKSMAPQQA 127
>gi|3600051|gb|AAC35538.1| contains similarity to the single-strand binding proteins family
(Pfam: SSB.hmm, score: 24.02) [Arabidopsis thaliana]
Length = 150
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLV 196
QWHR++V+ E LG ++ L S++YVEG++E +V+ND I+ V+ I EI +RR+G V
Sbjct: 17 QWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGMYV 76
Query: 197 FL 198
+
Sbjct: 77 HI 78
>gi|421852986|ref|ZP_16285668.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371478837|dbj|GAB30871.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 185
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + FSL T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERL V + L G +Y+EG+L+ + + D G R E+ I R G LV L
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDRFRGELVLL 114
>gi|354593813|ref|ZP_09011856.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
gi|353672924|gb|EHD14620.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
Length = 174
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + G V +L T N+R+ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPDVRTTQMGTKVVNLTLATSDTWNDRQTGERKENTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERL V K+L G +++EG L+ + + D G+ R E+ + R G LV L
Sbjct: 57 VVIFNERLADVAEKYLRKGRKVFIEGQLKTRKWTDQ-QGMERYTTEVVVDRFRGELVLL 114
>gi|258543617|ref|YP_003189050.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01]
gi|384043535|ref|YP_005482279.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|384052052|ref|YP_005479115.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|384055161|ref|YP_005488255.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|384058394|ref|YP_005491061.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|384061035|ref|YP_005500163.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|384064327|ref|YP_005484969.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|384120340|ref|YP_005502964.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421850857|ref|ZP_16283800.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
NBRC 101655]
gi|256634695|dbj|BAI00671.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01]
gi|256637751|dbj|BAI03720.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-03]
gi|256640805|dbj|BAI06767.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-07]
gi|256643860|dbj|BAI09815.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-22]
gi|256646915|dbj|BAI12863.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-26]
gi|256649968|dbj|BAI15909.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-32]
gi|256652958|dbj|BAI18892.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656012|dbj|BAI21939.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-12]
gi|371458321|dbj|GAB29003.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
NBRC 101655]
Length = 186
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + FSL T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERL V + L G +Y+EG+L+ + + D G R E+ I R G LV L
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDRFRGELVLL 114
>gi|329113793|ref|ZP_08242564.1| Single-stranded DNA-binding protein [Acetobacter pomorum DM001]
gi|326696803|gb|EGE48473.1| Single-stranded DNA-binding protein [Acetobacter pomorum DM001]
Length = 188
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + FSL T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERL V + L G +Y+EG+L+ + + D G R E+ I R G LV L
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDRFRGELVLL 114
>gi|347761666|ref|YP_004869227.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
gi|347580636|dbj|BAK84857.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
Length = 189
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERLG V + L G +Y+EG+L+ + + D +G R E+ + R G LV L
Sbjct: 57 VVIFNERLGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDRFRGELVLL 114
>gi|300724364|ref|YP_003713682.1| single-strand binding protein [Xenorhabdus nematophila ATCC 19061]
gi|297630899|emb|CBJ91576.1| single-strand binding protein [Xenorhabdus nematophila ATCC 19061]
Length = 170
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + L +G TV SL T +++ E TE WH
Sbjct: 5 GVNKVILLGYLGQDPEIRYLPTGGTVATLSLATSENWKDKQTGELREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG + LG
Sbjct: 57 RVVIFG-KLAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGSMQMLG 114
Query: 200 KGGDAQPPSPSEV 212
GD++ +P +
Sbjct: 115 SRGDSKSMAPQQA 127
>gi|424926277|ref|ZP_18349202.1| Ssb [Pseudomonas fluorescens R124]
gi|404307002|gb|EJZ60963.1| Ssb [Pseudomonas fluorescens R124]
Length = 171
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 13/129 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRDLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
Query: 200 K--GGDAQP 206
K GD QP
Sbjct: 113 KRDQGDQQP 121
>gi|32491249|ref|NP_871503.1| hypothetical protein WGLp500 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166456|dbj|BAC24646.1| ssb [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 167
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G +T SL T ++ E++ TE WH
Sbjct: 9 GINKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTE--------WH 60
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EGNL+ + + D G R I EI + NG + LG
Sbjct: 61 RVILFG-KLAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGINGCMQMLG 118
>gi|146329809|ref|YP_001209056.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
gi|146233279|gb|ABQ14257.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
Length = 169
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VGQ+P + + +G V FSL T N+R+ E TE WH
Sbjct: 3 GVNKVILVGNVGQNPDVRVMTNGEQVANFSLATSMNWNDRQTGEKREKTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
R Y RL ++ +++ GS +Y+EG LE + + D G+ R EI +
Sbjct: 55 RCVAY-RRLAEIIGQYVRKGSKLYIEGRLETRKWQDQ-NGIDRYTTEIIV 102
>gi|118602520|ref|YP_903735.1| single-strand binding protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567459|gb|ABL02264.1| single-strand binding protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 163
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ K +G+ VT S+ T ++ + + TE WH
Sbjct: 3 GINKVILVGNLGQDVELKYTSNGKAVTTLSVATSESWTDKNTGQKVDKTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ +L + ++L GS +YVEGNL + + D TG R EI + NG L L
Sbjct: 55 RVSLFG-KLAEIASQYLHKGSKVYVEGNLRTRKWQDQ-TGTNRYTTEIVVGFNGTLQMLD 112
Query: 200 K 200
+
Sbjct: 113 R 113
>gi|37525024|ref|NP_928368.1| hypothetical protein plu1039 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784450|emb|CAE13334.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 154
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G++GQ P + G TV + SL T +R+ E + TE WH
Sbjct: 5 GVNKVILIGRLGQEPEVRYRPEGDTVAVLSLATSETWRDRQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L + + D +G R E+ + + G + LG
Sbjct: 57 RVVIFG-KLAEIAGEYLKKGSQVYIEGQLRTRKWFDKASGQDRYSTEVVLNQQGTMQMLG 115
Query: 200 KGGDAQP 206
++P
Sbjct: 116 GRSQSEP 122
>gi|386081060|ref|YP_005994585.1| single-stranded DNA-binding protein [Pantoea ananatis PA13]
gi|354990241|gb|AER34365.1| single-stranded DNA-binding protein [Pantoea ananatis PA13]
Length = 184
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + G+ VT SL T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPGGKAVTGLSLATSETWRDKQTGENREITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + NG + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLKTRKWEDN-AGITRYTTEVIVGINGTMQMLG 114
>gi|37999428|sp|Q8D254.2|SSB_WIGBR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
Length = 163
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G +T SL T ++ E++ TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EGNL+ + + D G R I EI + NG + LG
Sbjct: 57 RVILFG-KLAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGINGCMQMLG 114
>gi|410945525|ref|ZP_11377266.1| ssDNA-binding protein [Gluconobacter frateurii NBRC 101659]
Length = 164
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG V FSL T N+R+ E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKVVSFSLATSDTWNDRQSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERLG V + L G +Y+EG L + + D G E+ I R G LV +
Sbjct: 57 VVIFNERLGDVADRFLRKGRKVYLEGELRTRKWTDQ-GGQEHYTTEVVIDRFRGELVLI 114
>gi|91204976|ref|YP_537331.1| single-stranded DNA-binding protein [Rickettsia bellii RML369-C]
gi|157827694|ref|YP_001496758.1| single-stranded DNA-binding protein [Rickettsia bellii OSU 85-389]
gi|123084592|sp|Q1RK72.1|SSB_RICBR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|91068520|gb|ABE04242.1| Single-stranded DNA-binding protein [Rickettsia bellii RML369-C]
gi|157802998|gb|ABV79721.1| single-strand DNA-binding protein [Rickettsia bellii OSU 85-389]
Length = 150
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G +G+ P + G+ + SL T I +R E + TE WHRV
Sbjct: 7 KVTLIGNLGRDPEIRTTGEGKEIANLSLATTDIWKDRVTGEKKEKTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLGKG 201
++ E L VV ++ GS +Y+EG+L+ + +ND +G+ + EI ++ N +L+ L
Sbjct: 59 IFNEGLVSVVKNYVKKGSKLYIEGSLQTRKWNDS-SGVEKYTTEIVLQNFNSQLILL--- 114
Query: 202 GDAQPPSPSEVRGAGY 217
D++ + S ++ +G+
Sbjct: 115 -DSKNSTSSSLQDSGH 129
>gi|409399331|ref|ZP_11249646.1| single-strand binding protein [Acidocella sp. MX-AZ02]
gi|409131487|gb|EKN01188.1| single-strand binding protein [Acidocella sp. MX-AZ02]
Length = 171
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P + +SG V ++ T N++ E + TE WHRV
Sbjct: 3 KVILVGNLGRDPEIRNTQSGMKVVNLAVATSESWNDKASGERKELTE--------WHRVV 54
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLGKG 201
+ +RL V K+L GS +Y+EG L+ + + D +G R EI I R NG LV L +
Sbjct: 55 IMNDRLADVAEKYLKKGSKLYLEGKLQTRKWTDQ-SGQERYTAEIMIGRFNGELVLLDRA 113
>gi|429212604|ref|ZP_19203769.1| single-stranded DNA-binding protein [Pseudomonas sp. M1]
gi|428157086|gb|EKX03634.1| single-stranded DNA-binding protein [Pseudomonas sp. M1]
Length = 165
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + L +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYLPNGNAVTNVTLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV V+ RL +V +++ GS IYVEG+L + + G R EI + NG + L
Sbjct: 56 RV-VFFGRLAEIVAEYVRKGSQIYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGNMQLLG 113
Query: 199 ---GKGGDAQPPSPSE 211
G GGD P +P E
Sbjct: 114 GRPGAGGDDAPRAPRE 129
>gi|27904962|ref|NP_778088.1| single-strand binding protein [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|32699636|sp|Q89A53.1|SSB_BUCBP RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|27904360|gb|AAO27193.1| single-strand binding protein [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 166
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + +++G VT +L T ++ E + TE WH
Sbjct: 5 GINKVILIGYLGQDPDVRYMQNGSAVTNITLATSETWKDKNNGEIKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ V+ +L + ++L GS +Y+EG+L+ + + D G+ R I EI + G + LG
Sbjct: 57 RI-VFFNKLAEIAGEYLKKGSQVYIEGSLQTRKWKDQ-NGIERYITEIIVSVGGTMQMLG 114
>gi|349699617|ref|ZP_08901246.1| single-strand DNA-binding protein Ssb [Gluconacetobacter europaeus
LMG 18494]
Length = 179
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ER+G V + L G +Y+EG+L+ + + D +G R E+ + R G LV L
Sbjct: 57 VVIFNERIGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDRFRGDLVLL 114
>gi|349686620|ref|ZP_08897762.1| single-strand DNA-binding protein Ssb [Gluconacetobacter oboediens
174Bp2]
Length = 185
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ER+G V + L G +Y+EG+L+ + + D +G R E+ + R G LV L
Sbjct: 57 VVIFNERIGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDRFRGDLVLL 114
>gi|163869071|ref|YP_001610305.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161018752|emb|CAK02310.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 152
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 11/137 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G +P K + SG V F + T ++ + + TE WH V
Sbjct: 9 KVILIGYLGANPESKTMSSGAEVVNFRMATSESYTDKATNKKVDKTE--------WHSVV 60
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G+ R + E+ + + G L L GK
Sbjct: 61 VFNPHLAKIALQYLKKGSKVYIEGQLQTRKWQDK-NGIERFVTEVILPKYKGDLKLLDGK 119
Query: 201 GGDAQPPSPSEVRGAGY 217
D Q PS S + Y
Sbjct: 120 NDDNQEPSSSAYERSIY 136
>gi|296114888|ref|ZP_06833536.1| single-stranded DNA-binding protein [Gluconacetobacter hansenii
ATCC 23769]
gi|295978594|gb|EFG85324.1| single-stranded DNA-binding protein [Gluconacetobacter hansenii
ATCC 23769]
Length = 176
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRNSQNGAKIVSLTLATSETWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ER+G V + L G +Y+EG L+ + + D +G+ R E+ I R G LV L
Sbjct: 57 VVIFNERIGDVAERFLRKGRKVYLEGTLQTRKWTDQ-SGMERYTTEVVIDRFRGELVLL 114
>gi|406706227|ref|YP_006756580.1| single stranded DNA-binding protein [alpha proteobacterium HIMB5]
gi|406652003|gb|AFS47403.1| single stranded DNA-binding protein [alpha proteobacterium HIMB5]
Length = 152
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G++V SL T ++ E + TE WHRV
Sbjct: 7 KVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKNTGEKKEKTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
V+ E L VV ++L G+ IYVEG L + + D +G + EI I+ N L L
Sbjct: 59 VFNEGLVNVVQQYLKKGAQIYVEGQLTTRKWKDEQSGQDKYSTEIVIQGYNSSLTML 115
>gi|410944285|ref|ZP_11376026.1| single-strand DNA binding protein [Gluconobacter frateurii NBRC
101659]
Length = 188
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N+R+ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKIVNLTIATSETWNDRQSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ +RLG V + L G +Y+EG L + + D +G R E+ I R G LV L
Sbjct: 57 VVIFNDRLGDVAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDRFRGELVLL 114
>gi|152973678|ref|YP_001338719.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|294496754|ref|YP_003560447.1| single-stranded binding protein [Klebsiella pneumoniae]
gi|410656317|ref|YP_006958916.1| ssb [Klebsiella pneumoniae]
gi|419977200|ref|ZP_14492566.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419982938|ref|ZP_14498173.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419988709|ref|ZP_14503777.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419994409|ref|ZP_14509313.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|420000222|ref|ZP_14514966.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420006029|ref|ZP_14520620.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420011736|ref|ZP_14526169.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420017633|ref|ZP_14531894.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420023320|ref|ZP_14537448.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420029102|ref|ZP_14543041.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420034855|ref|ZP_14548614.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420040452|ref|ZP_14554050.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420046249|ref|ZP_14559681.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420051979|ref|ZP_14565242.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420057795|ref|ZP_14570906.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420063428|ref|ZP_14576350.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420069190|ref|ZP_14581933.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420074929|ref|ZP_14587509.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420080787|ref|ZP_14593189.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420086465|ref|ZP_14598620.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421909908|ref|ZP_16339708.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|428943417|ref|ZP_19016316.1| single-stranded binding protein [Klebsiella pneumoniae VA360]
gi|150958460|gb|ABR80488.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|293339463|gb|ADE44017.1| single-stranded binding protein [Klebsiella pneumoniae]
gi|359730556|gb|AEV55300.1| ssb [Klebsiella pneumoniae]
gi|397338769|gb|EJJ32078.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397339049|gb|EJJ32325.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397339326|gb|EJJ32580.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397356266|gb|EJJ49114.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397356383|gb|EJJ49218.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397358225|gb|EJJ50951.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397373312|gb|EJJ65752.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397374493|gb|EJJ66825.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397378886|gb|EJJ71091.1| single-stranded binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397389496|gb|EJJ81433.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397391230|gb|EJJ83100.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397397210|gb|EJJ88887.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397407106|gb|EJJ98507.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397407460|gb|EJJ98851.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397415190|gb|EJK06378.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397423736|gb|EJK14657.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397424691|gb|EJK15588.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397432005|gb|EJK22672.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397439633|gb|EJK30070.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397446080|gb|EJK36307.1| single-strand DNA binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|410116204|emb|CCM82333.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|426296767|gb|EKV59347.1| single-stranded binding protein [Klebsiella pneumoniae VA360]
Length = 170
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG V F+L T +++ + TE WH
Sbjct: 5 GVNKVILVGYLGQDPEVRYLPSGGAVANFTLATSETWRDKQDGQMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ +L V ++L G+ +Y+EG L + + D +GL + + E+ + G + LG
Sbjct: 57 RVVVFG-KLAEVAGEYLRKGAQVYIEGQLRSRKWTDQ-SGLEKYVTEVVVNVGGTMQMLG 114
Query: 200 KGGDAQPPS 208
++QP S
Sbjct: 115 GRRESQPQS 123
>gi|182679033|ref|YP_001833179.1| single-strand binding protein [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634916|gb|ACB95690.1| single-strand binding protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 180
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P +++ SG V FSL T ++ E + TE WH
Sbjct: 5 VNKVILIGNLGRDPEVRRMNSGEAVVSFSLATTESWRDKMSGERRDRTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E LG + ++ GS +Y+EG L+ + + D G RR E+ ++R G L L
Sbjct: 57 VVIFNENLGKIAEQYCKKGSKVYLEGQLQTREYQDR-DGNQRRTTEVVLQRFRGELTLL 114
>gi|71066238|ref|YP_264965.1| single-strand binding protein [Psychrobacter arcticus 273-4]
gi|71039223|gb|AAZ19531.1| single-strand binding protein [Psychrobacter arcticus 273-4]
Length = 213
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P ++ +G +VT S+ T +++ E R A +WH
Sbjct: 3 GVNKVIIIGNLGADPEARQFNNGGSVTNISVATSEQWTDKQSGEK--------REATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ RLG + ++L GS +Y+EG+L + + DP G R I EI
Sbjct: 55 RISLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|449016618|dbj|BAM80020.1| single strand binding protein, SSB [Cyanidioschyzon merolae strain
10D]
Length = 238
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 11/110 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKS-GRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
+ + +LVG VG+ PV ++L + G TVTLF L T E + +++ QWH
Sbjct: 72 VNRVLLVGHVGRDPVTRQLTADGSTVTLFPLATK---------EFTSSQNASSQVLTQWH 122
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+++Y +LG ++ G +YVEG L+ + + D G+VR E+A+
Sbjct: 123 NIAIYDSKLGEIIQNACRKGYQVYVEGRLQSRQWTDA-KGVVRTHFEVAV 171
>gi|400288810|ref|ZP_10790842.1| single-strand binding protein [Psychrobacter sp. PAMC 21119]
Length = 207
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P ++ +G +VT S+ T +++ E + TE WH
Sbjct: 3 GVNKVIIIGNLGADPEARQFSNGGSVTNISVATSEQWTDKQSGEKKEATE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ RLG + ++L GS +Y+EG+L + + DP G R I EI
Sbjct: 55 RISLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|146329431|ref|YP_001209671.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
gi|146232901|gb|ABQ13879.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
Length = 151
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G VG+ P + + +G V FSL T N+R+ E TE W
Sbjct: 2 AGINKVILIGNVGKDPDMRVMTNGEQVANFSLATSMSWNDRQSGEKREKTE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
HR Y R+ ++ +++ GS +Y+EG LE + + D +G+ R EI +
Sbjct: 54 HRCVAY-RRIAEIIGQYVRKGSKLYIEGRLETRKWQDQ-SGVERYTTEIIV 102
>gi|330993202|ref|ZP_08317139.1| Single-stranded DNA-binding protein [Gluconacetobacter sp. SXCC-1]
gi|329759753|gb|EGG76260.1| Single-stranded DNA-binding protein [Gluconacetobacter sp. SXCC-1]
Length = 184
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRNSQNGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERLG V + L G +Y+EG+L+ + + D +G R E+ + R G LV L
Sbjct: 57 VVIFNERLGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDRFRGELVLL 114
>gi|93006782|ref|YP_581219.1| single-strand binding protein [Psychrobacter cryohalolentis K5]
gi|92394460|gb|ABE75735.1| single-strand binding protein [Psychrobacter cryohalolentis K5]
Length = 219
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P ++ +G +VT S+ T +++ E R A +WH
Sbjct: 3 GVNKVIIIGNLGADPEARQFNNGGSVTNISVATSEQWTDKQSGEK--------REATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ RLG + ++L GS +Y+EG+L + + DP G R I EI
Sbjct: 55 RISLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|162148105|ref|YP_001602566.1| single-stranded DNA-binding protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786682|emb|CAP56265.1| Single-stranded DNA-binding protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 198
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 62 SGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRP 121
+GQQ++S + + K ILVG +G+ P + ++G + +L T N+R
Sbjct: 7 TGQQQDS-------SMAGSVNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRAS 59
Query: 122 LENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLV 181
E TE WHRV ++ ERL V + L G +Y+EG L+ + + D +G
Sbjct: 60 GERRERTE--------WHRVVIFNERLADVAERFLRKGRKVYLEGTLQTRKWTDQ-SGQE 110
Query: 182 RRIREIAIRR-NGRLVFL 198
R E+ I R G LV L
Sbjct: 111 RYTTEVVIDRFRGELVLL 128
>gi|453331705|dbj|GAC86619.1| single-strand DNA binding protein [Gluconobacter thailandicus NBRC
3255]
Length = 193
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N+R+ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKIVNLTVATSETWNDRQSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ +RLG V + L G +Y+EG L + + D +G R E+ I R G LV L
Sbjct: 57 VVIFNDRLGDVAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDRFRGELVLL 114
>gi|238898622|ref|YP_002924303.1| single-stranded DNA-binding protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229466381|gb|ACQ68155.1| single-stranded DNA-binding protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 181
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 10/129 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P +++ SG VT ++ T +++ E + TE WH
Sbjct: 5 GINKVILVGYLGQDPEVRRMPSGNPVTNITIATSESWRDKQTEEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V K+L GS +Y+EG L+ + + D G R E+ + G + LG
Sbjct: 57 RVVIFG-KLAEVAEKYLRKGSQVYIEGALQTRKWTDQ-NGQDRYTTEVIVGVTGSMQMLG 114
Query: 200 KGGDAQPPS 208
+A P+
Sbjct: 115 NRQNAIVPA 123
>gi|212550688|ref|YP_002309005.1| single-strand DNA-binding protein [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548926|dbj|BAG83594.1| single-strand DNA-binding protein [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 152
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG VG+ P + GR V FSL T N + N + +R +WH V
Sbjct: 5 KVILVGNVGKDPETRYFDDGRGVANFSLAT-----NEKGYTTANGIQIPDRT--EWHNVV 57
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGG 202
V+ + L G+V K++ GS IY+EG + + ++D G+ R I EI + L + +
Sbjct: 58 VWRKGLVGIVEKYVHKGSKIYIEGKIRTRSYDDG-QGVKRYITEIYVDNIELLERIDRKL 116
Query: 203 DAQPPSP 209
D + SP
Sbjct: 117 DGENKSP 123
>gi|290476358|ref|YP_003469262.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
gi|289175695|emb|CBJ82498.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
Length = 170
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + L +G TV SL T +++ E TE WH
Sbjct: 5 GVNKVILLGYLGQDPEIRYLPTGGTVATLSLATSENWKDKQTGELREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG + LG
Sbjct: 57 RVVIFG-KLAEIAEEYLHKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGSMQMLG 114
Query: 200 KGGDAQPPSPSEV 212
D++ +P +
Sbjct: 115 SRNDSKSMAPQQA 127
>gi|339021196|ref|ZP_08645305.1| single-strand DNA binding protein Ssb [Acetobacter tropicalis NBRC
101654]
gi|338751681|dbj|GAA08609.1| single-strand DNA binding protein Ssb [Acetobacter tropicalis NBRC
101654]
Length = 186
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + +L T N+R+ E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGMKIVSLTLATSDTWNDRQSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERL V + L G +Y+EG L+ + + D +G R E+ + R G LV L
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGALQTRKWTDQ-SGQERYTTEVIVERFRGELVLL 114
>gi|116515274|ref|YP_802903.1| hypothetical protein BCc_357 [Buchnera aphidicola BCc]
gi|116257128|gb|ABJ90810.1| single-strand DNA-binding protein [Buchnera aphidicola BCc]
Length = 181
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G TV +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILIGYLGQDPDIRYMPNGGTVVNITLATSDTWKDKHTGENKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ ++ + ++L GS +Y+EG+L+ + + D GL R EI + G + LG
Sbjct: 57 RVVLFG-KIAEISGQYLKKGSQVYIEGSLQTRKWKDQ-NGLDRYTTEIVVSVTGSMQMLG 114
>gi|323143333|ref|ZP_08078022.1| single-strand binding family protein [Succinatimonas hippei YIT
12066]
gi|322416905|gb|EFY07550.1| single-strand binding family protein [Succinatimonas hippei YIT
12066]
Length = 231
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P+ + SG +VT S+ T +R N ++ TEYA +WH
Sbjct: 4 GVNKVILIGNLGDEPLCRTTHSGCSVTNISMVTNEVRRN---IDTGETTEYA-----EWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
RV ++ +L + ++L GS IYVEG L + F D G R + EI
Sbjct: 56 RVVMW-GKLADIAKQYLHKGSQIYVEGKLRTRSFMDK-QGQKRSVTEIV 102
>gi|68075493|ref|XP_679665.1| single-strand binding protein [Plasmodium berghei strain ANKA]
gi|56500463|emb|CAH94310.1| single-strand binding protein, putative [Plasmodium berghei]
Length = 276
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 70 DRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTE 129
+RP+ N + + K L+G+VG P K L G V FSL T +R E ++ T+
Sbjct: 68 NRPVMN--EKSLNKITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNSNELKSKTD 125
Query: 130 YANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIA 188
WHR+ VY + + ++ K+L G +Y++G+L +K F + + R+I EI
Sbjct: 126 --------WHRIVVYDQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNDLNNQPRQITEIV 177
Query: 189 IRRN-GRLVFL 198
+ N G L+FL
Sbjct: 178 LSYNKGDLIFL 188
>gi|290474572|ref|YP_003467452.1| single-stranded DNA-binding protein [Xenorhabdus bovienii SS-2004]
gi|289173885|emb|CBJ80672.1| Single-stranded DNA-binding protein [Xenorhabdus bovienii SS-2004]
Length = 169
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L +G TV + S+ T +++ E TE WH
Sbjct: 5 GINKVILVGYLGQDPEIRYLPAGGTVAMLSMATSDNWRDKQTGEIREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L G+ +Y+EG L+ + + D G R E+ + NG + LG
Sbjct: 57 RVVIFG-KLADIAAEYLQKGAQVYIEGQLKTRKWQDN-QGQDRYSTEVVVNVNGSMQMLG 114
Query: 200 KGGDAQPPSPSEV 212
+ + +P +V
Sbjct: 115 NRNEPKRMAPQQV 127
>gi|16125716|ref|NP_420280.1| single-strand binding protein [Caulobacter crescentus CB15]
gi|221234472|ref|YP_002516908.1| single-strand DNA binding protein [Caulobacter crescentus NA1000]
gi|37999459|sp|Q9A894.1|SSB_CAUCR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|13422838|gb|AAK23448.1| single-strand binding protein [Caulobacter crescentus CB15]
gi|220963644|gb|ACL95000.1| single-strand DNA binding protein [Caulobacter crescentus NA1000]
Length = 167
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRSLGSGDRVANLRIATSETWRDRSSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
V ++ + L V ++L GST+Y+EG L+ + + D TG + EI +++ G L L
Sbjct: 57 VVIFNDNLVKVAEQYLRKGSTVYIEGALQTRKWTDN-TGQEKYSTEIVLQKFRGELTMLG 115
Query: 199 GKGGDA 204
G+GGDA
Sbjct: 116 GRGGDA 121
>gi|296447169|ref|ZP_06889100.1| single-strand binding protein [Methylosinus trichosporium OB3b]
gi|296255334|gb|EFH02430.1| single-strand binding protein [Methylosinus trichosporium OB3b]
Length = 178
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + L SG V FS+ T +R E TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTLPSGDRVVSFSVATSESWRDRNTGERRERTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
VS++ E L + ++ GS IY+EG L+ + + D G+ RR ++ ++R G L L
Sbjct: 57 VSIFNENLAKIAEQYCRKGSKIYLEGQLQTREYQDK-DGIQRRATDVVLQRFRGELALL 114
>gi|421914723|ref|ZP_16344359.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|410122971|emb|CCM86984.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
Length = 323
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG V F+L T +++ + TE WH
Sbjct: 158 GVNKVILVGYLGQDPEVRYLPSGGAVANFTLATSETWRDKQDGQMRENTE--------WH 209
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ +L V ++L G+ +Y+EG L + + D +GL + + E+ + G + LG
Sbjct: 210 RVVVF-GKLAEVAGEYLRKGAQVYIEGQLRSRKWTDQ-SGLEKYVTEVVVNVGGTMQMLG 267
Query: 200 KGGDAQPPS 208
++QP S
Sbjct: 268 GRRESQPQS 276
>gi|425072893|ref|ZP_18475999.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
gi|404596667|gb|EKA97187.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
Length = 169
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 14/136 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K +L+G +GQ P + L +G VT +L T + +++ E + V+WH
Sbjct: 5 GVNKVLLIGHLGQDPEMRYLPNGDAVTNITLATSDLWKDKQSGE--------TKERVEWH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G R E+ + NG + LG
Sbjct: 57 RVVIF-GKLAKIAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVNINGSMQILG 114
Query: 200 K----GGDAQPPSPSE 211
G PSP +
Sbjct: 115 NNNQAGSQKSQPSPHQ 130
>gi|386012330|ref|YP_005930607.1| ssDNA-binding protein [Pseudomonas putida BIRD-1]
gi|313499036|gb|ADR60402.1| Single-strand binding protein [Pseudomonas putida BIRD-1]
Length = 165
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T ++R E TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKRSGEKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NG + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDMNGTMQLLG 112
Query: 200 KGGDAQPP 207
Q P
Sbjct: 113 SRPQGQQP 120
>gi|153008867|ref|YP_001370082.1| ssDNA-binding protein [Ochrobactrum anthropi ATCC 49188]
gi|151560755|gb|ABS14253.1| single-strand binding protein [Ochrobactrum anthropi ATCC 49188]
Length = 151
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 10/125 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGHLGADPDVRRLNSGDMVVNLRIATSESWRDKNSGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V+++ E +G V ++L GS +Y+EG L+ + + D G R EI +++ G LV LG
Sbjct: 57 VAIFNENIGKVAEQYLKKGSKVYIEGALQTRKWQDQ-NGNDRYSTEIVMKQFRGELVMLG 115
Query: 200 KGGDA 204
G D+
Sbjct: 116 GGRDS 120
>gi|70952901|ref|XP_745587.1| single-strand binding protein [Plasmodium chabaudi chabaudi]
gi|56525957|emb|CAH81753.1| single-strand binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 275
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G+VG P K L G V FSL T +R E ++ T+ WHRV
Sbjct: 79 KITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRVV 130
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRN-GRLVFL 198
VY + + ++ K+L G +Y++G+L +K F + + R+I EI + N G L+FL
Sbjct: 131 VYDQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNELNNQPRQITEIVLSYNKGDLIFL 188
>gi|320540007|ref|ZP_08039664.1| putative single-stranded DNA-binding protein [Serratia symbiotica
str. Tucson]
gi|320029930|gb|EFW11952.1| putative single-stranded DNA-binding protein [Serratia symbiotica
str. Tucson]
Length = 162
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G VT SL T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVTGLSLATSESWRDKQTGENRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + NG + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDN-SGTDRWTTEVVVGINGTMQMLG 114
>gi|209542719|ref|YP_002274948.1| ssDNA-binding protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530396|gb|ACI50333.1| single-strand binding protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 184
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G + +L T N+R E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ERL V + L G +Y+EG L+ + + D +G R E+ I R G LV L
Sbjct: 57 VVIFNERLADVAERFLRKGRKVYLEGTLQTRKWTDQ-SGQERYTTEVVIDRFRGELVLL 114
>gi|148261030|ref|YP_001235157.1| single-strand binding protein [Acidiphilium cryptum JF-5]
gi|146402711|gb|ABQ31238.1| single-strand binding protein [Acidiphilium cryptum JF-5]
Length = 161
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG-RLVFL- 198
V + +RL V + L GS IY+EG L+ + + D +G + EI + R G LV L
Sbjct: 57 VVIMNDRLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIGAELVLLD 115
Query: 199 ----GKGGDAQP 206
G GGD P
Sbjct: 116 RAGAGAGGDDMP 127
>gi|326404430|ref|YP_004284512.1| single-stranded DNA-binding protein [Acidiphilium multivorum
AIU301]
gi|325051292|dbj|BAJ81630.1| single-stranded DNA-binding protein [Acidiphilium multivorum
AIU301]
Length = 162
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG-RLVFL- 198
V + +RL V + L GS IY+EG L+ + + D +G + EI + R G LV L
Sbjct: 57 VVIMNDRLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIGAELVLLD 115
Query: 199 ----GKGGDAQP 206
G GGD P
Sbjct: 116 RAGAGAGGDDMP 127
>gi|406990655|gb|EKE10290.1| hypothetical protein ACD_16C00056G0009 [uncultured bacterium]
Length = 152
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 14/133 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G+ P + + G V +L T ++ E + TE WHR
Sbjct: 5 INKVILVGNLGKDPEVRMTQEGVKVVNLALATSEQWRDKDTQERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL- 198
V ++ ER+ V K+L GS +Y+EG L+ + + D G R E+ + R G L L
Sbjct: 57 VVIFNERIADVADKYLRKGSKVYIEGQLQTRKWTDQ-EGKERYTTEVVVPRFRGELTMLD 115
Query: 199 ---GKGGDAQPPS 208
G DA+ P+
Sbjct: 116 SARSTGMDAESPT 128
>gi|406708110|ref|YP_006758462.1| single stranded DNA-binding protein [alpha proteobacterium HIMB59]
gi|406653886|gb|AFS49285.1| single stranded DNA-binding protein [alpha proteobacterium HIMB59]
Length = 155
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +G + FS+ T N+ + E+ TE WHR
Sbjct: 5 VNKVILLGNLGKDPDIRATSAGSRLASFSIATSTKYRNKETQQLEDKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V V+ ++L V K+L GS +YVEG L+ + + D G+ + E+ I
Sbjct: 57 VVVFNDKLADVCEKYLRKGSKVYVEGQLQTRKWTDN-NGVDKYTTEVVI 104
>gi|221057181|ref|XP_002259728.1| single-strand binding protein [Plasmodium knowlesi strain H]
gi|193809800|emb|CAQ40504.1| single-strand binding protein, putative [Plasmodium knowlesi strain
H]
Length = 280
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 63 GQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPL 122
G +R +RP+ + + K L+G+VG P K L G V FSL T +R
Sbjct: 61 GSKRYYNNRPMTG--EKSLNKISLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTN 118
Query: 123 ENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLV 181
E ++ T+ WHR+ VY + + +V K L G +Y++G+L ++ F + +T
Sbjct: 119 ELKSKTD--------WHRIVVYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQP 170
Query: 182 RRIREIAIRRN-GRLVFL 198
R+I E+ + N G L+FL
Sbjct: 171 RQITEVVLSYNKGDLIFL 188
>gi|339319831|ref|YP_004679526.1| single-strand DNA-binding protein [Candidatus Midichloria
mitochondrii IricVA]
gi|338225956|gb|AEI88840.1| single-strand DNA-binding protein [Candidatus Midichloria
mitochondrii IricVA]
Length = 155
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + + GR + FSL T ++ E + V+WH+V
Sbjct: 7 KVILIGNVGRDPEIRTTQDGREIASFSLATSDAWRDKGSGEKKEK--------VEWHKVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
++ L GVV ++ GS IY+EG+L+ + + DP G+ + E+ ++ +G L+ L
Sbjct: 59 IFQPHLVGVVRNYVHKGSKIYLEGSLQTRKWTDP-NGVEKYTTEVILQPYSGALLLL 114
>gi|416021271|ref|ZP_11566945.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320321152|gb|EFW77293.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
Length = 198
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLHKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
Query: 200 K--GGDAQ 205
GDAQ
Sbjct: 113 GRPQGDAQ 120
>gi|338990619|ref|ZP_08634451.1| Single-strand binding protein [Acidiphilium sp. PM]
gi|338205430|gb|EGO93734.1| Single-strand binding protein [Acidiphilium sp. PM]
Length = 158
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 15/130 (11%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P + +SG + ++ T N++ E + TE WHRV
Sbjct: 3 KVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQERTE--------WHRVV 54
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG-RLVFL--- 198
+ +RL V + L GS IY+EG L+ + + D +G + EI + R G LV L
Sbjct: 55 IMNDRLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIGAELVLLDRA 113
Query: 199 --GKGGDAQP 206
G GGD P
Sbjct: 114 GAGAGGDDMP 123
>gi|240849995|ref|YP_002971388.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267118|gb|ACS50706.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 146
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 86 LVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYP 145
L+G++G +P K + SG + FS+ T +++ + TE WH V ++
Sbjct: 3 LIGRLGANPESKTMNSGAEIVNFSIATSESYTDKKTNQKVEKTE--------WHSVVIFN 54
Query: 146 ERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GKGGD 203
L + +++L GS +Y+EG L+ + + D G R EI + + G L L K
Sbjct: 55 PHLAKIALQYLNKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLPQFKGELYLLDAKKDQ 113
Query: 204 AQPPSPSEVRGAGY 217
+ PP+PS + Y
Sbjct: 114 SAPPTPSPITSQNY 127
>gi|334143263|ref|YP_004536419.1| single-strand binding protein [Thioalkalimicrobium cyclicum ALM1]
gi|333964174|gb|AEG30940.1| single-strand binding protein [Thioalkalimicrobium cyclicum ALM1]
Length = 192
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + +G + S+ T N+R E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPEVRFAANGNAIANLSVATSEQWNDRATGERQERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y EG L+ + + D TG + EI I + G ++ +
Sbjct: 55 RVVIFG-KLAEIAQQYLTKGSQVYFEGKLQTRKWQDQATGQDKYSTEIVIDQGGGVMQML 113
Query: 200 KGGDAQ 205
GG+ Q
Sbjct: 114 GGGNRQ 119
>gi|153870489|ref|ZP_01999881.1| Single-strand binding protein/Primosomal replication protein n
[Beggiatoa sp. PS]
gi|152073041|gb|EDN70115.1| Single-strand binding protein/Primosomal replication protein n
[Beggiatoa sp. PS]
Length = 225
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 19/148 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + +SG T+ L T +++ E + TE WH
Sbjct: 4 GVNKVILVGHLGIDPEIRTTQSGMTIATVKLATNFSTKDKQTGEWRDETE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-------RN 192
RV V+ ERL +V ++L GS IYVEG ++ + D TG R + EI R RN
Sbjct: 56 RV-VFFERLAEIVKQYLRKGSQIYVEGRIKTNKWQDQNTGQDRYMTEIVAREMQMLDSRN 114
Query: 193 ---GRLVFLGKGGDAQPPSPSEVRGAGY 217
G + + G PP S+ + GY
Sbjct: 115 DNMGTSSYATQPGGNYPPYGSQQQPGGY 142
>gi|402773712|ref|YP_006593249.1| ssDNA-binding protein [Methylocystis sp. SC2]
gi|401775732|emb|CCJ08598.1| Single-stranded DNA-binding protein [Methylocystis sp. SC2]
Length = 167
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + L SG V FS+ T ++N E +R +WH
Sbjct: 5 VNKVILIGNLGRDPEVRTLPSGDRVVSFSVAT------TESWRDKNTGERKDR--TEWHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
VS++ E LG + ++ GS IY+EG L+ + + D G R+ ++ ++R G L L
Sbjct: 57 VSIFNENLGKIAEQYCRKGSKIYLEGQLQTREYTDK-DGNQRKATDVVLQRFRGELTLLD 115
Query: 199 GKGG 202
KGG
Sbjct: 116 SKGG 119
>gi|389584245|dbj|GAB66978.1| single-strand binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 279
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G+VG P K L G V FSL T +R E ++ T+ WHRV
Sbjct: 78 KIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRVV 129
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRN-GRLVFL 198
VY + + +V K L G +Y++G+L ++ F + +T R+I E+ + N G L+FL
Sbjct: 130 VYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQPRQITEVVLSYNKGDLIFL 187
>gi|350563309|ref|ZP_08932131.1| single-strand binding protein [Thioalkalimicrobium aerophilum AL3]
gi|349779173|gb|EGZ33520.1| single-strand binding protein [Thioalkalimicrobium aerophilum AL3]
Length = 186
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + +G + S+ T N+R E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPEVRYAANGNAIANLSVATSEQWNDRATGERQERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L + ++L GS +Y+EG L+ + + D TG + EI I + G ++ +
Sbjct: 55 RVVIFG-KLAEIAQQYLTKGSQVYLEGKLQTRKWQDQATGQDKYSTEIVIDQGGGVMQM 112
>gi|420350514|ref|ZP_14851851.1| single-stranded DNA-binding protein, partial [Shigella boydii
4444-74]
gi|391294678|gb|EIQ52879.1| single-stranded DNA-binding protein, partial [Shigella boydii
4444-74]
Length = 156
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + L +G V +L T +++ E + TE WH
Sbjct: 5 GINKVILIGHLGQDPEIRYLPNGGAVANLTLATSESWRDKQSGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R E+ + NG L LG
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLKTRKWFDQQNGVDRYATEVVVSVNGTLQMLG 115
>gi|82595019|ref|XP_725672.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23480763|gb|EAA17237.1| SINGLE-STRAND BINDING PROTEIN [Plasmodium yoelii yoelii]
Length = 274
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G+VG P K L G V FSL T +R E ++ T+ WHR+
Sbjct: 77 KITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNSNELKSKTD--------WHRIV 128
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRN-GRLVFL 198
VY + + ++ K+L G +Y++G+L +K F + + R+I EI + N G L+FL
Sbjct: 129 VYDQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNDLNNQPRQITEIVLSYNKGDLIFL 186
>gi|405945696|gb|EKC17439.1| Single-stranded DNA-binding protein [Crassostrea gigas]
Length = 151
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G + S+ T +R E + TE WHR
Sbjct: 5 VNKVILIGNLGRDPEVRSTQAGGKIVNLSIATSERWKDRNTGEQKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V+++ E LG + ++L GST +VEG L+ + + D G+ + E+ +++ G L LG
Sbjct: 57 VAIFNEALGRIAEQYLKKGSTCHVEGQLQTRKWTDE-QGVEKYSTEVVLQQYRGELTLLG 115
Query: 200 -KGGDAQPPSPS 210
+ AQ PS
Sbjct: 116 SRDNQAQQNQPS 127
>gi|341584444|ref|YP_004764935.1| single-stranded DNA-binding protein [Rickettsia heilongjiangensis
054]
gi|350273968|ref|YP_004885281.1| single-strand DNA-binding protein [Rickettsia japonica YH]
gi|383482746|ref|YP_005391660.1| single-stranded DNA-binding protein [Rickettsia montanensis str.
OSU 85-930]
gi|340808669|gb|AEK75257.1| single-stranded DNA-binding protein [Rickettsia heilongjiangensis
054]
gi|348593181|dbj|BAK97142.1| single-strand DNA-binding protein [Rickettsia japonica YH]
gi|378935100|gb|AFC73601.1| single-stranded DNA-binding protein [Rickettsia montanensis str.
OSU 85-930]
Length = 152
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|296100779|ref|YP_003610925.1| single-strand DNA-binding protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|397166200|ref|ZP_10489646.1| single-stranded DNA-binding protein [Enterobacter radicincitans DSM
16656]
gi|295055238|gb|ADF59976.1| single-strand DNA-binding protein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|396092362|gb|EJI89926.1| single-stranded DNA-binding protein [Enterobacter radicincitans DSM
16656]
Length = 166
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + VT S+ T +++ EN TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPDSTAVTTLSVATSETWRDKQTGENRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G+ R E+ + NG + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTD-TNGIERWTTEVRVGVNGTMQMLG 114
Query: 200 KG 201
G
Sbjct: 115 GG 116
>gi|34581111|ref|ZP_00142591.1| single-strand binding protein [Rickettsia sibirica 246]
gi|28262496|gb|EAA26000.1| single-strand binding protein [Rickettsia sibirica 246]
Length = 152
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|407781465|ref|ZP_11128683.1| single-strand binding protein [Oceanibaculum indicum P24]
gi|407207682|gb|EKE77613.1| single-strand binding protein [Oceanibaculum indicum P24]
Length = 170
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +++G+ V +L T +R+ E + TE WHR
Sbjct: 5 VNKVILIGNLGRDPEIRSMQNGQKVANLALATSESWRDRQSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L V K+L GS IY+EG+L+ + + D +G + EI ++R G L L
Sbjct: 57 VVIFNENLIDVAEKYLRKGSKIYIEGSLQTRKWQDQ-SGQEKYTTEIVLQRYRGELTML 114
>gi|444308391|ref|ZP_21144037.1| ssDNA-binding protein [Ochrobactrum intermedium M86]
gi|443488223|gb|ELT50979.1| ssDNA-binding protein [Ochrobactrum intermedium M86]
Length = 152
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P +++ SG TV + T +R+ E + TE WH
Sbjct: 5 VNKVILVGYLGADPDVRQMNSGDTVVNMRIATSESWRDRQTGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ E L + ++L GS +Y+EG L+ + + D G R EI +++ G LV LG
Sbjct: 57 VVIFNEGLAKIAEQYLKKGSKVYIEGQLQTRKWQDQ-NGNDRYTTEIVLKQYRGELVMLG 115
Query: 200 KG 201
G
Sbjct: 116 GG 117
>gi|15893218|ref|NP_360932.1| single-stranded DNA-binding protein [Rickettsia conorii str. Malish
7]
gi|165933856|ref|YP_001650645.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Iowa]
gi|229587202|ref|YP_002845703.1| single-stranded DNA-binding protein [Rickettsia africae ESF-5]
gi|238650832|ref|YP_002916687.1| single-strand DNA-binding protein [Rickettsia peacockii str.
Rustic]
gi|374319815|ref|YP_005066314.1| ssDNA-binding protein [Rickettsia slovaca 13-B]
gi|378721940|ref|YP_005286827.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Colombia]
gi|378723284|ref|YP_005288170.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Arizona]
gi|378724638|ref|YP_005289522.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hauke]
gi|379017145|ref|YP_005293380.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Brazil]
gi|379018423|ref|YP_005294658.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hino]
gi|379019737|ref|YP_005295971.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hlp#2]
gi|379713009|ref|YP_005301348.1| single-stranded DNA-binding protein [Rickettsia philipii str. 364D]
gi|383484588|ref|YP_005393501.1| single-stranded DNA-binding protein [Rickettsia parkeri str.
Portsmouth]
gi|383751907|ref|YP_005427008.1| single-stranded DNA-binding protein [Rickettsia slovaca str.
D-CWPP]
gi|37999453|sp|Q92G30.1|SSB_RICCN RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|15620434|gb|AAL03833.1| single-strand binding protein [Rickettsia conorii str. Malish 7]
gi|165908943|gb|ABY73239.1| single-strand DNA binding protein [Rickettsia rickettsii str. Iowa]
gi|228022252|gb|ACP53960.1| Single-stranded DNA-binding protein [Rickettsia africae ESF-5]
gi|238624930|gb|ACR47636.1| single-strand DNA-binding protein [Rickettsia peacockii str.
Rustic]
gi|360042364|gb|AEV92746.1| Single-stranded DNA-binding protein [Rickettsia slovaca 13-B]
gi|376325669|gb|AFB22909.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Brazil]
gi|376326964|gb|AFB24203.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Colombia]
gi|376328308|gb|AFB25546.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Arizona]
gi|376329654|gb|AFB26891.1| single-stranded DNA-binding protein [Rickettsia philipii str. 364D]
gi|376330989|gb|AFB28225.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hino]
gi|376332317|gb|AFB29551.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hlp#2]
gi|376333653|gb|AFB30886.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hauke]
gi|378936942|gb|AFC75442.1| single-stranded DNA-binding protein [Rickettsia parkeri str.
Portsmouth]
gi|379774921|gb|AFD20277.1| single-stranded DNA-binding protein [Rickettsia slovaca str.
D-CWPP]
Length = 152
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|157829131|ref|YP_001495373.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
'Sheila Smith']
gi|157801612|gb|ABV76865.1| single-strand DNA-binding protein [Rickettsia rickettsii str.
'Sheila Smith']
Length = 152
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|114327884|ref|YP_745041.1| single-strand DNA binding protein [Granulibacter bethesdensis
CGDNIH1]
gi|114316058|gb|ABI62118.1| single-strand DNA binding protein [Granulibacter bethesdensis
CGDNIH1]
Length = 173
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + + G V F+L T N+R E + TE WHR
Sbjct: 5 VNKVILIGNLGRDPEVRNTQDGGKVVNFTLATSETWNDRASGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V V+ +RL + ++L G+ +YVEG L+ + + D G + E+ I R G + L
Sbjct: 57 VVVFNDRLADIAERYLRKGTKVYVEGALQTRKWTDQ-AGQEKYTTEVVISRFRGEITML 114
>gi|71276419|ref|ZP_00652695.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71162735|gb|EAO12461.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71728562|gb|EAO30716.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 148
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV + +LG + ++L GS Y+EG + F D G R + EI + L G
Sbjct: 55 RVKFFG-KLGDIAAEYLHKGSQCYIEGTIRYDKFTDQ-DGQERYVTEIIADQMHMLGGRG 112
Query: 200 KGGDAQPPS--PSEVR 213
+G P P++VR
Sbjct: 113 EGSSGITPQRRPAKVR 128
>gi|421520423|ref|ZP_15967088.1| ssDNA-binding protein [Pseudomonas putida LS46]
gi|402755741|gb|EJX16210.1| ssDNA-binding protein [Pseudomonas putida LS46]
Length = 165
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T ++R E TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKRSGEKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L G+ Y+EG L+ + + G+ R EI + NG + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGAQCYIEGKLQTREWEK--DGIKRYTTEIVVDINGTMQLLG 112
Query: 200 KGGDAQPP 207
Q P
Sbjct: 113 SRPQGQQP 120
>gi|170742568|ref|YP_001771223.1| single-strand binding protein [Methylobacterium sp. 4-46]
gi|168196842|gb|ACA18789.1| single-strand binding protein [Methylobacterium sp. 4-46]
Length = 171
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V L T +++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRRLASGDPVVNLRLATSESWKDKQSGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
V +Y E L V ++L GS +YVEG L+ + + D +G+ + E+ ++R G L L
Sbjct: 57 VVIYNENLARVAEQYLRKGSKVYVEGQLQTRKWQDQ-SGVEKYTTEVVLQRFRGELTILD 115
Query: 199 GKGG 202
G+GG
Sbjct: 116 GRGG 119
>gi|239948387|ref|ZP_04700140.1| single-stranded DNA-binding protein [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239922663|gb|EER22687.1| single-stranded DNA-binding protein [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 151
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 10/130 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLGKG 201
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILLDSK 117
Query: 202 GDAQPPSPSE 211
SE
Sbjct: 118 NSNNHTQDSE 127
>gi|414342269|ref|YP_006983790.1| single-strand DNA binding protein [Gluconobacter oxydans H24]
gi|411027604|gb|AFW00859.1| single-strand DNA binding protein [Gluconobacter oxydans H24]
Length = 186
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 85 ILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVY 144
ILVG +G+ P + +SG + ++ T N+R+ E + TE WHRV ++
Sbjct: 2 ILVGNLGKDPEVRNTQSGSKIVNLTVATSETWNDRQSGERKERTE--------WHRVVIF 53
Query: 145 PERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
+RLG V + L G +Y+EG L + + D +G R E+ I R G LV L
Sbjct: 54 NDRLGDVAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDRFRGELVLL 107
>gi|119502955|ref|ZP_01625040.1| single-stranded DNA-binding protein [marine gamma proteobacterium
HTCC2080]
gi|119461301|gb|EAW42391.1| single-stranded DNA-binding protein [marine gamma proteobacterium
HTCC2080]
Length = 164
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P + ++G +T S+ T ++ + + TE WH
Sbjct: 5 GINKVILVGNLGSDPENRMSQAGAAITNLSIATSETWKDKNTGQQQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ RL V ++L GS +YVEG L + + D TG R EI
Sbjct: 57 RV-VFFNRLAEVAAEYLRKGSKVYVEGTLRTRKWQDKQTGQDRYTTEI 103
>gi|378768967|ref|YP_005197442.1| ssDNA-binding protein [Pantoea ananatis LMG 5342]
gi|365188455|emb|CCF11405.1| Single-stranded DNA-binding protein [Pantoea ananatis LMG 5342]
Length = 184
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G VT S+ T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGTAVTSLSVATSETWRDKQTGENREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS Y+EG L + + D G R EI + NG + LG
Sbjct: 57 RVVLFG-KLAEIAGEYLRKGSQAYIEGKLRTREWQDS-EGTKRYTTEIVVDVNGTMQMLG 114
>gi|227356904|ref|ZP_03841283.1| single-stranded DNA-binding protein [Proteus mirabilis ATCC 29906]
gi|227162974|gb|EEI47919.1| single-stranded DNA-binding protein [Proteus mirabilis ATCC 29906]
Length = 175
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K +L+G +GQ P + L +G VT +L T +++ E + V+WH
Sbjct: 5 GVNKVLLIGHLGQDPEMRYLPNGDAVTNITLATSDSWKDKQSGE--------TKERVEWH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G R E+ + NG + LG
Sbjct: 57 RVVIFG-KLAEIAGEYLHKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVNINGSMQMLG 114
Query: 200 KGGDAQPPSPSE 211
A +P +
Sbjct: 115 NNNQAGRQNPQQ 126
>gi|432600252|ref|ZP_19836510.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE66]
gi|431144950|gb|ELE46632.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE66]
Length = 178
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V L T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQLATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKTTGTMQMLG 114
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 115 RAAGAQ 120
>gi|344924255|ref|ZP_08777716.1| single-stranded DNA-binding protein [Candidatus Odyssella
thessalonicensis L13]
Length = 163
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K LVG++G+ P + G + S+ T +R E + TE WHR
Sbjct: 5 VNKVTLVGRLGKDPEVRNSPDGAKIVTMSVATSEAWKDRSSGEKKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E+LG + ++L GS +YVEG+L+ + + D G+ + E+ I+R G L L
Sbjct: 57 VVIFNEKLGEIAERYLKKGSQVYVEGSLQTRKWADQ-QGIEKYTTEVVIQRYRGELTLL 114
>gi|410690638|ref|YP_006964351.1| Single-stranded DNA-binding protein [Salmonella sp. 14]
gi|389597322|gb|AFK90074.1| Single-stranded DNA-binding protein [Salmonella sp. 14]
Length = 184
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +YVEG L + + D +G+ R + EI + +NG + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQMLG 114
Query: 200 KGGDAQPP 207
D P
Sbjct: 115 GHRDGGQP 122
>gi|295689345|ref|YP_003593038.1| single-strand binding protein [Caulobacter segnis ATCC 21756]
gi|295431248|gb|ADG10420.1| single-strand binding protein [Caulobacter segnis ATCC 21756]
Length = 191
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRSLGSGDRVANLRIATSETWRDRNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ + L V ++L GST+Y+EG L+ + + D TG + EI +++ G L LG
Sbjct: 57 VVIFNDNLVKVAEQYLKKGSTVYIEGALQTRKWTDN-TGQEKYSTEIVLQKFRGELTMLG 115
Query: 200 KGGDAQPPS 208
GD+ S
Sbjct: 116 GRGDSAGAS 124
>gi|423143252|ref|ZP_17130888.1| single-strand binding family protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379049166|gb|EHY67063.1| single-strand binding family protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 182
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ+P + + +G V L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQAPEVRYMPNGGAVANLQLATSDNWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L V ++L GS +Y+EG L + ++D G+ R I E+ + G + LG
Sbjct: 57 RVVLYG-KLAEVAGEYLRKGSQVYIEGQLRTRSWDDN-NGVTRYITEVIVNTTGTMQMLG 114
Query: 200 KGGDAQP 206
++ P
Sbjct: 115 ARRESYP 121
>gi|418869436|ref|ZP_13423871.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|392836315|gb|EJA91900.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
Length = 167
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ +L + ++L G+ +Y+EG L + ++D G+ R + EI ++ G + LG
Sbjct: 57 RVVVFG-KLAEIASEYLRKGAQVYIEGQLRTRSWDD--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQP-PSP 209
+ AQ P P
Sbjct: 114 RAAGAQTQPEP 124
>gi|184159800|ref|YP_001848139.1| single-stranded DNA-binding protein [Acinetobacter baumannii ACICU]
gi|384133493|ref|YP_005516105.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii 1656-2]
gi|417880318|ref|ZP_12524849.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH3]
gi|445470673|ref|ZP_21451605.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC338]
gi|183211394|gb|ACC58792.1| Single-stranded DNA-binding protein [Acinetobacter baumannii ACICU]
gi|322509713|gb|ADX05167.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii 1656-2]
gi|342225402|gb|EGT90400.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH3]
gi|444772627|gb|ELW96742.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC338]
Length = 193
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP-----ITGLVR--RIREIAIRRN 192
R+ ++ RLG + + L GS +Y+EG+L + + D T +R +++ + R+
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQ 113
Query: 193 GRLVFLGKGGDAQPPSPSEVRGAGY 217
G F G QP + +G GY
Sbjct: 114 GEQGFAGGNDFNQPRFNAPQQGGGY 138
>gi|354598994|ref|ZP_09017011.1| single-strand binding protein [Brenneria sp. EniD312]
gi|353676929|gb|EHD22962.1| single-strand binding protein [Brenneria sp. EniD312]
Length = 180
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L +G V SL T +++ E + TE WH
Sbjct: 5 GVNKVILVGFLGQDPEIRYLPAGSAVATLSLATSETWRDKQSGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVSMGGTMQMLG 114
Query: 200 ------------KGGDAQPPSPS 210
+GG QP P+
Sbjct: 115 GRSQSANSGQRAQGGWGQPQQPT 137
>gi|91763283|ref|ZP_01265247.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1002]
gi|91717696|gb|EAS84347.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1002]
Length = 152
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G++V SL T ++ E + TE WHR+
Sbjct: 7 KVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKTTGEKKEKTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
V+ + L VV ++L G+ IYVEG + + + D +G + EI I+ N L L
Sbjct: 59 VFNDGLVNVVQQYLKKGAQIYVEGQIATRKWKDEQSGQDKYSTEIVIQGYNSSLTML 115
>gi|416019927|ref|ZP_11566550.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320321622|gb|EFW77726.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
Length = 201
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
Query: 200 K--GGDAQ 205
GDAQ
Sbjct: 113 GRPQGDAQ 120
>gi|254293783|ref|YP_003059806.1| single-strand binding protein [Hirschia baltica ATCC 49814]
gi|254042314|gb|ACT59109.1| single-strand binding protein [Hirschia baltica ATCC 49814]
Length = 158
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ +G +V F++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRQFPNGGSVASFTVATSESWKDRNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
V+V+ E L +V +++ GS +Y+EG LE + + D G + E+ +R G + +
Sbjct: 57 VAVFSEGLVKIVERYVKKGSKVYIEGQLETRKWTDN-QGQEKYTTEVVLRNFGSTLTMLD 115
Query: 201 GGDAQPPSPSEVRGA 215
G D PS RG
Sbjct: 116 GRDG----PSGGRGV 126
>gi|332872795|ref|ZP_08440760.1| single-strand binding family protein [Acinetobacter baumannii
6014059]
gi|384144919|ref|YP_005527629.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii MDR-ZJ06]
gi|385239226|ref|YP_005800565.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TCDC-AB0715]
gi|387122283|ref|YP_006288165.1| single stranded DNA-binding protein [Acinetobacter baumannii
MDR-TJ]
gi|407930705|ref|YP_006846348.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TYTH-1]
gi|416149871|ref|ZP_11603115.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB210]
gi|417544522|ref|ZP_12195608.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC032]
gi|417571273|ref|ZP_12222130.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC189]
gi|417576259|ref|ZP_12227104.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-17]
gi|417870832|ref|ZP_12515782.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH1]
gi|417875321|ref|ZP_12520139.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH2]
gi|417882231|ref|ZP_12526537.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH4]
gi|421203820|ref|ZP_15660954.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC12]
gi|421533929|ref|ZP_15980208.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC30]
gi|421627793|ref|ZP_16068590.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC180]
gi|421668251|ref|ZP_16108291.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|421670133|ref|ZP_16110142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC099]
gi|421688701|ref|ZP_16128399.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-143]
gi|421705064|ref|ZP_16144505.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1122]
gi|421708843|ref|ZP_16148216.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1219]
gi|421790665|ref|ZP_16226864.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-2]
gi|424050657|ref|ZP_17788193.1| single-strand binding protein [Acinetobacter baumannii Ab11111]
gi|424061825|ref|ZP_17799312.1| single-strand binding protein [Acinetobacter baumannii Ab44444]
gi|425753997|ref|ZP_18871864.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-113]
gi|445484692|ref|ZP_21456727.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-78]
gi|323519727|gb|ADX94108.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TCDC-AB0715]
gi|332738956|gb|EGJ69818.1| single-strand binding family protein [Acinetobacter baumannii
6014059]
gi|333364240|gb|EGK46254.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB210]
gi|342226105|gb|EGT91080.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH2]
gi|342226899|gb|EGT91852.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH1]
gi|342238155|gb|EGU02591.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH4]
gi|347595412|gb|AEP08133.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii MDR-ZJ06]
gi|385876775|gb|AFI93870.1| single stranded DNA-binding protein [Acinetobacter baumannii
MDR-TJ]
gi|395551721|gb|EJG17730.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC189]
gi|395569480|gb|EJG30142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-17]
gi|398326659|gb|EJN42803.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC12]
gi|400382410|gb|EJP41088.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC032]
gi|404560458|gb|EKA65701.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-143]
gi|404669410|gb|EKB37303.1| single-strand binding protein [Acinetobacter baumannii Ab11111]
gi|404675552|gb|EKB43251.1| single-strand binding protein [Acinetobacter baumannii Ab44444]
gi|407189157|gb|EKE60385.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1122]
gi|407189571|gb|EKE60797.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1219]
gi|407899286|gb|AFU36117.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TYTH-1]
gi|408709679|gb|EKL54920.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC180]
gi|409988178|gb|EKO44352.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC30]
gi|410380689|gb|EKP33269.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|410386691|gb|EKP39159.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC099]
gi|410405290|gb|EKP57331.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-2]
gi|425497390|gb|EKU63496.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-113]
gi|444767691|gb|ELW91937.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-78]
Length = 193
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP-----ITGLVR--RIREIAIRRN 192
R+ ++ RLG + + L GS +Y+EG+L + + D T +R +++ + R+
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQ 113
Query: 193 GRLVFLGKGGDAQPPSPSEVRGAGY 217
G F G QP + +G GY
Sbjct: 114 GEQGFAGGNDFNQPRFNAPQQGGGY 138
>gi|291241617|ref|XP_002740707.1| PREDICTED: single-stranded DNA binding protein 1-like [Saccoglossus
kowalevskii]
Length = 164
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 44 SAIHSDADPLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGR 103
SAI+ PL S T + Q R + + K LVG+ G+ +K L+SGR
Sbjct: 4 SAINRLMPPLVRSCTTSSEAQIRR---------FEKCVNKVTLVGRAGRGAEEKGLESGR 54
Query: 104 TVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV-YPERLGGVVMKHLVPGSTI 162
V F+L T + + R ++ EY R QWHR+SV Y L V+K++ GS +
Sbjct: 55 PVVQFTLATSDVYKDNR---TDHEGEY--REKTQWHRISVFYSPALRETVLKYVKKGSRL 109
Query: 163 YVEGNLE 169
Y+ G LE
Sbjct: 110 YITGKLE 116
>gi|395233065|ref|ZP_10411311.1| single-strand binding protein [Enterobacter sp. Ag1]
gi|394732581|gb|EJF32249.1| single-strand binding protein [Enterobacter sp. Ag1]
Length = 185
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVASLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L G+ +Y+EG L + + D +G+ R + EI + +NG + LG
Sbjct: 57 RVVLF-GKLAEIASEYLRKGAQVYIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQMLG 114
Query: 200 KGGDAQPP 207
D P
Sbjct: 115 GRRDGGQP 122
>gi|296100204|ref|YP_003617121.1| single-strand DNA-binding protein [Pseudomonas putida]
gi|295443570|dbj|BAJ06449.1| single-strand DNA-binding protein [Pseudomonas putida]
Length = 171
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GR+ LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGRMQLLG 112
>gi|356960519|ref|ZP_09063501.1| single-strand binding protein [gamma proteobacterium SCGC
AAA001-B15]
Length = 158
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +G ++ S+ T ++ + + TE WH
Sbjct: 3 GINKVILVGNLGAKPEVKYASNGNAISNLSVATSESWTDKSTGQKQERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RVS++ +L + ++L GS +YVEG L+ + + D G R E+ + NG L L
Sbjct: 55 RVSLFG-KLAEIAGQYLDKGSKVYVEGKLQTRKWQDQ-NGQDRYTTEVVVSGFNGTLQML 112
Query: 199 GKGGDAQPPSPSE 211
+ GD+ +PS+
Sbjct: 113 DRRGDSSSIAPSK 125
>gi|71083676|ref|YP_266396.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062789|gb|AAZ21792.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1062]
Length = 152
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G++V SL T ++ E + TE WHR+
Sbjct: 7 KVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKTTGEKKEKTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
V+ + L VV ++L G+ IYVEG + + + D +G + EI I+ N L L
Sbjct: 59 VFNDGLVNVVQQYLKKGAQIYVEGQIATRKWKDEQSGQDKYSTEIVIQGYNSSLTML 115
>gi|220924063|ref|YP_002499365.1| single-strand binding protein [Methylobacterium nodulans ORS 2060]
gi|219948670|gb|ACL59062.1| single-strand binding protein [Methylobacterium nodulans ORS 2060]
Length = 170
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V L T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLTSGDPVVNLRLATSESWKDKATGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
V +Y E L V ++L GS +YVEG L+ + + D +G+ + E+ ++R G L L
Sbjct: 57 VVIYNENLARVAEQYLRKGSKVYVEGQLQTRKWQDQ-SGVEKYTTEVVLQRFRGELTILD 115
Query: 199 GKGG 202
G+GG
Sbjct: 116 GRGG 119
>gi|240850481|ref|YP_002971880.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267604|gb|ACS51192.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 151
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G +P K + SG + FS+ T +++ + TE WH V
Sbjct: 4 KVTLIGRLGANPESKTMNSGAEIVNFSIATSESYTDKKTNQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
++ L + +++L GS +YVEG L+ + + D G R EI + + G L L K
Sbjct: 56 IFNPHLAKIALQYLNKGSKVYVEGKLQTRKWQDK-NGHERYTTEIVLPQFKGELYLLDAK 114
Query: 201 GGDAQPPSPSEVRGAGY 217
+ P+PS + Y
Sbjct: 115 KEQSASPTPSPITSQNY 131
>gi|384227960|ref|YP_005619705.1| single-strand binding protein [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538900|gb|AEO08877.1| single-strand binding protein [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 171
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ +L + ++L GS +Y+EG+L+ + + D GL R EI + G + LG
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEIIVNIGGTMQMLG 114
>gi|148244617|ref|YP_001219311.1| single-strand DNA binding protein [Candidatus Vesicomyosocius
okutanii HA]
gi|146326444|dbj|BAF61587.1| single-strand DNA binding protein [Candidatus Vesicomyosocius
okutanii HA]
Length = 165
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VGQ+ K + GR+V S+ T N R ++ +N + +R +WH
Sbjct: 3 GINKVILIGNVGQNIELKYISDGRSVANLSVAT-----NERWID-KNTGQKVDRT--EWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RVS++ +L + ++L GS IY+EG L+ + + D TG R EI + NG L L
Sbjct: 55 RVSLFG-KLADIASQYLHKGSKIYIEGKLKTRKWQDK-TGTDRYTTEIVVSGLNGTLQML 112
>gi|260550237|ref|ZP_05824450.1| single-stranded DNA-binding protein [Acinetobacter sp. RUH2624]
gi|260406765|gb|EEX00245.1| single-stranded DNA-binding protein [Acinetobacter sp. RUH2624]
Length = 194
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP-----ITGLVR--RIREIAIRRN 192
R+ ++ RLG + + L GS +Y+EG+L + + D T +R +++ + R+
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQ 113
Query: 193 GRLVFLGKGGDAQPPSPSEVRGAGY 217
G F G QP + +G GY
Sbjct: 114 GEQGFAGGNDFNQPRFNAPQQGGGY 138
>gi|254456392|ref|ZP_05069821.1| single-strand binding protein family protein [Candidatus
Pelagibacter sp. HTCC7211]
gi|207083394|gb|EDZ60820.1| single-strand binding protein family protein [Candidatus
Pelagibacter sp. HTCC7211]
Length = 150
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G++V SL T ++ E + TE WHR+
Sbjct: 7 KVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKNTGEKKEKTE--------WHRIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+ E L V+ ++L G+ IYVEG L + + D +G + EI ++
Sbjct: 59 VFNEGLVNVIQQYLKKGAQIYVEGQLTTRKWKDEQSGQDKYSTEIVLQ 106
>gi|67459717|ref|YP_247341.1| single-stranded DNA-binding protein [Rickettsia felis URRWXCal2]
gi|75535892|sp|Q4UJW3.1|SSB_RICFE RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|67005250|gb|AAY62176.1| Single-stranded DNA-binding protein [Rickettsia felis URRWXCal2]
Length = 152
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|365146438|ref|ZP_09349232.1| single-strand binding protein [Klebsiella sp. 4_1_44FAA]
gi|363643219|gb|EHL82542.1| single-strand binding protein [Klebsiella sp. 4_1_44FAA]
Length = 180
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQMLG 114
>gi|416563644|ref|ZP_11762841.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|417377903|ref|ZP_12146695.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|417472054|ref|ZP_12167876.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|417533869|ref|ZP_12187794.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|327412968|emb|CAX67986.1| single stranded binding protein [Salmonella enterica subsp. VII]
gi|353588496|gb|EHC47526.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353655502|gb|EHC96496.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353659802|gb|EHC99592.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|363571705|gb|EHL55610.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
Length = 178
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++G + LG
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQMLG 114
>gi|402702960|ref|ZP_10850939.1| single-stranded DNA-binding protein [Rickettsia helvetica C9P9]
Length = 152
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|350426037|ref|XP_003494313.1| PREDICTED: single-stranded DNA-binding protein-like [Bombus
impatiens]
Length = 170
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L +G VT S+ T +++ E + TE WH
Sbjct: 5 GINKVILVGNLGQDPEVRYLPNGGAVTTISVATSETWKDKQTGEPKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ RL + ++L GS +Y+EG L+ + + D TG R E+ + G L LG
Sbjct: 57 RVVIFG-RLAEIAGEYLRRGSQVYIEGALQTRKWQDQ-TGQDRYTTEVVVNIGGVLQILG 114
>gi|445461634|ref|ZP_21448893.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC047]
gi|444771358|gb|ELW95489.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC047]
Length = 193
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP-----ITGLVR--RIREIAIRRN 192
R+ ++ RLG + + L GS +Y+EG+L + + D T +R +++ + R+
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQ 113
Query: 193 GRLVFLGKGGDAQPPSPSEVRGAGY 217
G F G QP + +G GY
Sbjct: 114 GEQGFAGGNDFNQPRFNAPQQGGGY 138
>gi|383311901|ref|YP_005364702.1| single-stranded DNA-binding protein [Candidatus Rickettsia
amblyommii str. GAT-30V]
gi|378930561|gb|AFC69070.1| single-stranded DNA-binding protein [Candidatus Rickettsia
amblyommii str. GAT-30V]
Length = 152
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L V +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVAERYITKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|157826305|ref|YP_001494025.1| single-stranded DNA-binding protein [Rickettsia akari str.
Hartford]
gi|157800263|gb|ABV75517.1| single-strand DNA-binding protein [Rickettsia akari str. Hartford]
Length = 152
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVAKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|15617138|ref|NP_240351.1| single-strand binding protein [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681890|ref|YP_002468276.1| single-strand binding protein [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682445|ref|YP_002468829.1| single-strand binding protein [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471595|ref|ZP_05635594.1| single-strand binding protein [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384226334|ref|YP_005617497.1| single-strand binding protein [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384226823|ref|YP_005618574.1| single-strand binding protein [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|384227390|ref|YP_005619140.1| single-strand binding protein [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|414562894|ref|YP_005618085.1| single-strand binding protein [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|11387134|sp|P57610.1|SSB_BUCAI RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|25294289|pir||E84993 single-strand binding protein [imported] - Buchnera sp. (strain
APS)
gi|10039203|dbj|BAB13237.1| single-strand binding protein [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622178|gb|ACL30334.1| single-strand binding protein [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624733|gb|ACL30888.1| single-strand binding protein [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086266|gb|ADP66348.1| single-strand binding protein [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086841|gb|ADP66922.1| single-strand binding protein [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087430|gb|ADP67510.1| single-strand binding protein [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087920|gb|ADP67999.1| single-strand binding protein [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 171
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ +L + ++L GS +Y+EG+L+ + + D GL R EI + G + LG
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEIIVNIGGTMQMLG 114
>gi|226227220|ref|YP_002761326.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
gi|226090411|dbj|BAH38856.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
Length = 155
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 84 AILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSV 143
AIL+G VGQ P + + +G V FSL TG + + + A QWHR
Sbjct: 8 AILIGNVGQDPEVRTVGTGGRVAQFSLATG---------KQWTDAQGNKQDATQWHRCVA 58
Query: 144 YPE---RLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG- 199
+ + L +V K++ G IYVEG +E + + D G R EI +R L+ LG
Sbjct: 59 WNQGKYTLADIVEKYVRKGEKIYVEGEIEYRQWQDK-DGQTRYTTEIRVR---ELMLLGG 114
Query: 200 --KGGDAQPPSPSEV 212
+GG+ + P++
Sbjct: 115 KSEGGEVKQERPAKT 129
>gi|168822792|ref|ZP_02834792.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|409248434|ref|YP_004193461.1| Single-stranded DNA-binding protein SSB; Helix-destabilizing
protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|205340874|gb|EDZ27638.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320089249|emb|CBY99002.1| Single-stranded DNA-binding protein SSB; Helix-destabilizing
protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 184
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +YVEG L + + D +G+ R + EI + +NG + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQMLG 114
Query: 200 KGGDAQPP 207
D P
Sbjct: 115 GRRDGGQP 122
>gi|66047745|ref|YP_237586.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B728a]
gi|63258452|gb|AAY39548.1| single-strand binding protein [Pseudomonas syringae pv. syringae
B728a]
Length = 183
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ E + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGEKKEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|365104444|ref|ZP_09334068.1| single-strand binding protein [Citrobacter freundii 4_7_47CFAA]
gi|418512553|ref|ZP_13078794.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|363644253|gb|EHL83546.1| single-strand binding protein [Citrobacter freundii 4_7_47CFAA]
gi|366083585|gb|EHN47504.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 184
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +YVEG L + + D +G+ R + EI + +NG + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQMLG 114
Query: 200 KGGDAQPP 207
D P
Sbjct: 115 GRRDGGQP 122
>gi|416029203|ref|ZP_11572044.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320326953|gb|EFW82970.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 201
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWADKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
Query: 200 K--GGDAQ 205
GDAQ
Sbjct: 113 GRPQGDAQ 120
>gi|338738189|ref|YP_004675151.1| single-stranded DNA-binding protein [Hyphomicrobium sp. MC1]
gi|337758752|emb|CCB64577.1| Single-stranded DNA-binding protein [Hyphomicrobium sp. MC1]
Length = 173
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 11/124 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG+ P ++ + GR + S+ T +++ E + TE WHR
Sbjct: 5 VNKVILVGNVGKDPEIRRTQDGRPIANLSIATSDTWRDKQTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL- 198
V V+ E L ++ +++ G+ +Y+EG L+ + + D +G + E+ I+ NG L L
Sbjct: 57 VVVFSEPLCKIIEQYVKKGAKLYIEGALQTRKWTDQ-SGAEKYSTEVVIQGYNGTLTMLD 115
Query: 199 GKGG 202
G GG
Sbjct: 116 GAGG 119
>gi|315500085|ref|YP_004088888.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
gi|315418097|gb|ADU14737.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
Length = 172
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + L SG V ++ T ++ E + TE WHR
Sbjct: 5 VNKVIIIGNLGKDPEIRTLNSGERVANLTVATSEQWRDKMTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ + L + ++L GST+Y+EG+L+ + + D G+ + EI ++R NG L L
Sbjct: 57 VVIFNDNLAKIAEQYLRKGSTVYLEGSLQTRKWTDQ-QGVEKYTTEIVLQRFNGNLTLL 114
>gi|418851685|ref|ZP_13406393.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392816616|gb|EJA72539.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
Length = 189
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVILIGNLGQDPELRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ +L + ++L GS +Y+EG L + ++D G+ R + EI + G + LG
Sbjct: 57 RVVVF-GKLAEIAGEYLRKGSQVYIEGQLRTRSWDDN-NGVTRYVTEIVVSMQGTMQMLG 114
>gi|379714214|ref|YP_005302552.1| single-stranded DNA-binding protein [Rickettsia massiliae str.
AZT80]
gi|383480882|ref|YP_005389797.1| single-stranded DNA-binding protein [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|376334860|gb|AFB32092.1| single-stranded DNA-binding protein [Rickettsia massiliae str.
AZT80]
gi|378933221|gb|AFC71724.1| single-stranded DNA-binding protein [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 152
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ + L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSDGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|114765567|ref|ZP_01444668.1| single-strand binding protein [Pelagibaca bermudensis HTCC2601]
gi|114542016|gb|EAU45049.1| single-strand binding protein [Roseovarius sp. HTCC2601]
Length = 159
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++G V FSL T +R + TE WHR
Sbjct: 5 VNKVILVGHLGADPELRTFQNGGKVCNFSLATSETWKDRNTGDRRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFLG 199
VS+ E L + ++L GS +Y+EG LE + + D +G R E+ +R G L L
Sbjct: 57 VSILNEGLCSIAERYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLRPYRGELTLLD 115
Query: 200 K 200
+
Sbjct: 116 R 116
>gi|416507210|ref|ZP_11735243.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363554012|gb|EHL38257.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
Length = 178
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++G + LG
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSLVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQMLG 114
>gi|432663345|ref|ZP_19898963.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
gi|431195782|gb|ELE94745.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
Length = 180
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQMLG 114
>gi|244539408|dbj|BAH83451.1| single-strand DNA-binding protein [Candidatus Ishikawaella
capsulata Mpkobe]
Length = 171
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K +L+G +GQ P + +++G V +L T +++ E ++ TE WH
Sbjct: 5 GINKVMLIGNLGQDPEVRYMQNGNLVVNINLATSETWRDKKTGEKKDNTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ +L V ++L GS +Y+EG L + + D G R EI + NG + LG
Sbjct: 57 RIVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWQDQ-NGKDRYTTEIVVGSNGTMQMLG 114
>gi|294637733|ref|ZP_06716008.1| single-strand binding protein [Edwardsiella tarda ATCC 23685]
gi|451966588|ref|ZP_21919840.1| single-stranded DNA-binding protein [Edwardsiella tarda NBRC
105688]
gi|291089081|gb|EFE21642.1| single-strand binding protein [Edwardsiella tarda ATCC 23685]
gi|451314505|dbj|GAC65202.1| single-stranded DNA-binding protein [Edwardsiella tarda NBRC
105688]
Length = 184
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSESWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV++Y +L + ++L GS +YVEG L + + D +G R E+ + NG + LG
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYVEGQLRTRKWQDQ-SGQDRYTTEVVVDINGSMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|257485813|ref|ZP_05639854.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|422683576|ref|ZP_16741835.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|331012909|gb|EGH92965.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 201
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSLF-GKVAEIAGEYLHKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL- 111
Query: 200 KGGDAQPPSPSEVRGAG 216
GG Q SP G G
Sbjct: 112 -GGRPQGDSPQGQTGHG 127
>gi|301631445|ref|XP_002944808.1| PREDICTED: single-stranded DNA-binding protein-like [Xenopus
(Silurana) tropicalis]
Length = 171
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 16/127 (12%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I+VG +G+ P + SG +V S+ T ++ EN+ TE WHR
Sbjct: 4 INKVIIVGHIGRDPEMRTFPSGDSVANVSIATTDRWRDKNTGENKETTE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG- 199
V+ + RL +V ++L GS +YVEG+L + + D +G+ + I E+ R L LG
Sbjct: 56 VT-FSGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQ-SGVEKFITEV---RADNLQMLGS 110
Query: 200 --KGGDA 204
+GGDA
Sbjct: 111 RQQGGDA 117
>gi|365855690|ref|ZP_09395732.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
gi|363718909|gb|EHM02231.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
Length = 172
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T EN E + +WH
Sbjct: 5 VNKVILVGNLGRDPEVRNFQNGGRVVNLRIAT---------TENYKDREGNRQEKTEWHS 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V+++ ERLG + K+L GS +YVEG LE + + D G R E+ +R G L L
Sbjct: 56 VAIFNERLGEIAEKYLRKGSKVYVEGKLETRKWQDQ-AGQDRYSTEVTLRNFGGELTLL 113
>gi|440575494|emb|CCN80079.1| single-stranded DNA-binding [Klebsiella pneumoniae]
Length = 180
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQMLG 114
>gi|425389436|ref|ZP_18772940.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|408320637|gb|EKJ36726.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
Length = 178
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G++R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVIRYITEILVKTTGTMQMLG 114
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 115 RAAGAQ 120
>gi|400405699|ref|YP_006588558.1| single stranded DNA-binding protein [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400364062|gb|AFP85130.1| single stranded DNA-binding protein [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 152
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRHMPNGGVVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + NG + LG
Sbjct: 57 RVVLFG-KLADVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNINGTMKMLG 114
>gi|302130268|ref|ZP_07256258.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length = 201
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL- 111
Query: 200 KGGDAQPPSPSEVRGAG 216
GG Q SP G G
Sbjct: 112 -GGRPQGDSPQGQTGHG 127
>gi|261346557|ref|ZP_05974201.1| single-strand binding protein [Providencia rustigianii DSM 4541]
gi|282565260|gb|EFB70795.1| single-strand binding protein [Providencia rustigianii DSM 4541]
Length = 173
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQSGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G + L
Sbjct: 57 RVVIFG-KLAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNIGGSMQMLG 114
Query: 199 GKGGDA 204
G+GGDA
Sbjct: 115 GRGGDA 120
>gi|51474004|ref|YP_067761.1| single-stranded DNA-binding protein [Rickettsia typhi str.
Wilmington]
gi|383752779|ref|YP_005427879.1| single-stranded DNA-binding protein [Rickettsia typhi str. TH1527]
gi|383843614|ref|YP_005424117.1| single-stranded DNA-binding protein [Rickettsia typhi str.
B9991CWPP]
gi|81826347|sp|Q68Y11.1|SSB_RICTY RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|51460316|gb|AAU04279.1| single-strand binding protein [Rickettsia typhi str. Wilmington]
gi|380759422|gb|AFE54657.1| single-stranded DNA-binding protein [Rickettsia typhi str. TH1527]
gi|380760261|gb|AFE55495.1| single-stranded DNA-binding protein [Rickettsia typhi str.
B9991CWPP]
Length = 152
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLGKG 201
++ E L +V +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSIVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILLD-- 115
Query: 202 GDAQPPSPSEVRGAGY 217
S + +G+G+
Sbjct: 116 ---NKNSNNHTQGSGH 128
>gi|383501158|ref|YP_005414517.1| single-stranded DNA-binding protein [Rickettsia australis str.
Cutlack]
gi|378932169|gb|AFC70674.1| single-stranded DNA-binding protein [Rickettsia australis str.
Cutlack]
Length = 152
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L V+ +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVIERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|157804225|ref|YP_001492774.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
McKiel]
gi|379023366|ref|YP_005300027.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
CA410]
gi|157785488|gb|ABV73989.1| single-strand DNA-binding protein [Rickettsia canadensis str.
McKiel]
gi|376324304|gb|AFB21545.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
CA410]
Length = 152
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRVTGERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNAQLILL 114
>gi|219857031|ref|YP_002474063.1| single-strand DNA (ssDNA) binding protein [Pseudomonas putida]
gi|414085887|ref|YP_002154413.1| single-strand DNA (ssDNA) binding protein [Pseudomonas
resinovorans]
gi|171363644|dbj|BAG15889.1| single-strand DNA (ssDNA) binding protein [Pseudomonas
resinovorans]
gi|219688959|dbj|BAH10050.1| single-strand DNA (ssDNA) binding protein [Pseudomonas putida]
Length = 170
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + GR+ LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGRMQLLG 112
>gi|402819329|ref|ZP_10868897.1| single-stranded DNA-binding protein [alpha proteobacterium
IMCC14465]
gi|402511476|gb|EJW21737.1| single-stranded DNA-binding protein [alpha proteobacterium
IMCC14465]
Length = 156
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 28/150 (18%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G P ++ K GR + S+ TG ++ E TE WHR
Sbjct: 5 INKVILVGNLGADPEIRQTKDGRPIANLSIATGESWKDKNTGERREKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP-----------ITGLVRRIREIAI 189
V ++ E L + ++L GS +Y+EG L+ + + D + G + +
Sbjct: 57 VVIFSEGLAKIAEQYLRKGSKVYIEGQLQTRKWQDQNGQDKYTTEVVLQGYSSNLTMLDS 116
Query: 190 RRNGRLVFLGK---------GGDAQPPSPS 210
R+ G F G GGD+ PP+ S
Sbjct: 117 RQGGGGDFAGSSAGNISSGGGGDSLPPASS 146
>gi|397662439|ref|YP_006503139.1| single-stranded DNA-binding protein [Taylorella equigenitalis ATCC
35865]
gi|394350618|gb|AFN36532.1| single-stranded DNA-binding protein [Taylorella equigenitalis ATCC
35865]
Length = 175
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG++G P + GR ++ S+GT + N++ E TE WHR
Sbjct: 3 VNKVILVGRLGNDPEVRSGTEGRVISTVSIGTNSVWNDKSSGERREETE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
V V+ RL + +L G+ +YVEG L+ + + D G+ R E+ I N L LG
Sbjct: 55 V-VFFNRLAEIARDYLRKGTQVYVEGRLKTRKYQDN-QGVDRYTTEV-IADN--LQMLGS 109
Query: 201 GGDAQPPSPSEVRGAGY 217
GD+ S G GY
Sbjct: 110 KGDSDGQRGSRTDG-GY 125
>gi|226953624|ref|ZP_03824088.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ATCC 27244]
gi|294651864|ref|ZP_06729155.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter haemolyticus ATCC 19194]
gi|226835627|gb|EEH68010.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ATCC 27244]
gi|292822253|gb|EFF81165.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter haemolyticus ATCC 19194]
Length = 193
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ V RLG + ++L GS +Y+EG+L + + D G R EI R ++ L
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYSTEI---RGDQMQMLD 109
Query: 200 -------KGGDAQPPSPSEVRGAGY 217
GGD P + +G GY
Sbjct: 110 SRQQSEQSGGDFNQPRFNNNQGGGY 134
>gi|331668069|ref|ZP_08368921.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA271]
gi|418044252|ref|ZP_12682387.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
gi|331064583|gb|EGI36490.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA271]
gi|383472850|gb|EID64894.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
Length = 179
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|327412812|emb|CAX67818.1| single strand binding protein [Salmonella bongori]
Length = 178
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++G + LG
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQMLG 114
>gi|257454594|ref|ZP_05619850.1| single-stranded DNA-binding protein [Enhydrobacter aerosaccus SK60]
gi|257447904|gb|EEV22891.1| single-stranded DNA-binding protein [Enhydrobacter aerosaccus SK60]
Length = 219
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG +G P K+ +G +VT ++ T N+++ E TE WH
Sbjct: 3 GVNKVIIVGNLGSDPEVKQFANGGSVTRIAVATSEQWNDKQTGERREQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+S++ +LG + ++L GS +Y+EG+L + D G+ R EI R ++ LG
Sbjct: 55 RISLF-NKLGEIAAQYLRKGSQVYIEGSLRTSKYTDQ-NGVERYATEI---RADQMQMLG 109
Query: 200 KGGDAQ 205
G Q
Sbjct: 110 TAGGVQ 115
>gi|213422780|ref|ZP_03355823.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 176
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 3 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++G + LG
Sbjct: 55 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQMLG 112
>gi|156094446|ref|XP_001613260.1| single-strand binding protein [Plasmodium vivax Sal-1]
gi|148802134|gb|EDL43533.1| single-strand binding protein, putative [Plasmodium vivax]
Length = 280
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G+VG P K L G V FSL T +R E ++ T+ WHR+
Sbjct: 78 KISLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRIV 129
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRN-GRLVFL 198
VY + + +V K L G +Y++G+L ++ F + +T R+I E+ + N G L+FL
Sbjct: 130 VYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQPRQITEVVLSYNKGDLIFL 187
>gi|16763010|ref|NP_458627.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144497|ref|NP_807839.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161420|ref|ZP_03347130.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213428139|ref|ZP_03360889.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213609821|ref|ZP_03369647.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213646761|ref|ZP_03376814.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224586099|ref|YP_002639898.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|378962424|ref|YP_005219910.1| ssDNA-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|37999807|sp|Q9RHF4.1|SSB2_SALTI RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2;
AltName: Full=Helix-destabilizing protein 2
gi|25294300|pir||AB1027 single strand binding protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|6513859|gb|AAF14810.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|16505317|emb|CAD09315.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140135|gb|AAO71699.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|32454454|gb|AAP83026.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C]
gi|224470627|gb|ACN48457.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|374356296|gb|AEZ48057.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 178
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++G + LG
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQMLG 114
>gi|15604667|ref|NP_221185.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Madrid E]
gi|383486814|ref|YP_005404494.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
GvV257]
gi|383488230|ref|YP_005405909.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Chernikova]
gi|383489075|ref|YP_005406753.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Katsinyian]
gi|383489914|ref|YP_005407591.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Dachau]
gi|383500052|ref|YP_005413413.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500887|ref|YP_005414247.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
RpGvF24]
gi|386082730|ref|YP_005999309.1| ssDNA-binding protein [Rickettsia prowazekii str. Rp22]
gi|6647831|sp|Q9ZCC2.1|SSB_RICPR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|3861362|emb|CAA15261.1| SINGLE-STRAND BINDING PROTEIN (ssb) [Rickettsia prowazekii str.
Madrid E]
gi|292572496|gb|ADE30411.1| Single-stranded DNA-binding protein [Rickettsia prowazekii str.
Rp22]
gi|380757179|gb|AFE52416.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
GvV257]
gi|380758584|gb|AFE53820.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
RpGvF24]
gi|380761109|gb|AFE49631.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Chernikova]
gi|380761954|gb|AFE50475.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Katsinyian]
gi|380762798|gb|AFE51318.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763637|gb|AFE52156.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Dachau]
Length = 152
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLGKG 201
++ E L +V +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSEGLVSIVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILLDHK 117
Query: 202 GDAQPPSPS 210
Q S
Sbjct: 118 NSNQNTQGS 126
>gi|323669651|emb|CBJ94773.1| single strand binding protein [Salmonella bongori]
Length = 178
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++G + LG
Sbjct: 57 RVVLY-GKLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQMLG 114
>gi|38257082|ref|NP_940736.1| single-strand DNA-binding protein [Pseudomonas syringae pv.
syringae]
gi|37723859|gb|AAR02185.1| Ssb [Pseudomonas syringae pv. syringae]
Length = 201
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|167554080|ref|ZP_02347821.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|418805214|ref|ZP_13360804.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|205321652|gb|EDZ09491.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|392767826|gb|EJA24587.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 185
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GVNKVIIVGNLGQDPEIRYIPNGSAVANLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +++EG L + + D +G+ R + EI + +NG + LG
Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVFIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQMLG 114
Query: 200 ---KGGDAQ 205
GG +Q
Sbjct: 115 GRRDGGQSQ 123
>gi|417594808|ref|ZP_12245487.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
gi|345364135|gb|EGW96269.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
Length = 150
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|418054854|ref|ZP_12692909.1| single-strand binding protein [Hyphomicrobium denitrificans 1NES1]
gi|353210436|gb|EHB75837.1| single-strand binding protein [Hyphomicrobium denitrificans 1NES1]
Length = 173
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG+ P ++ + GR + SL T +++ E + TE WHR
Sbjct: 5 VNKVILVGNVGKDPEIRRTQDGRPIANLSLATSETWRDKQTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L VV +++ GS +Y+EG L+ + + D +G + E+ ++ NG L L
Sbjct: 57 VVIFSEPLCKVVEQYVKKGSKLYIEGALQTRKWTDQ-SGAEKYSTEVVLQGFNGTLTML 114
>gi|441462337|gb|AGC34626.1| putative single-stranded DNA-binding protein [Pseudomonas phage
H66]
Length = 165
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + SG+ VT SL T +++ + + TE WH
Sbjct: 4 GVNKVILVGHLGQDPDARSTPSGKAVTSLSLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ RL + ++L GS +Y+EG+L + + G E+ + NG + LG
Sbjct: 56 RVVLFG-RLAEIAAQYLRKGSQVYIEGSLRTRKWQGQ-DGQDHYSTEVVVDINGNMQLLG 113
>gi|289651432|ref|ZP_06482775.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 201
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWADKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL- 111
Query: 200 KGGDAQPPSPSEVRGAG 216
GG Q SP G G
Sbjct: 112 -GGRPQGDSPHGQNGHG 127
>gi|30410826|ref|NP_660857.2| single-strand binding protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 176
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 72 PLENGL----DPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENP 127
LENG+ G+ K IL+G +GQ P + + +G V +L T ++ EN+
Sbjct: 7 KLENGVLIMASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEK 66
Query: 128 TEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
TE WHR+ ++ +L + ++L GS +Y+EG+L+ + + D GL R E+
Sbjct: 67 TE--------WHRIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEV 116
Query: 188 AIRRNGRLVFLG 199
+ G + LG
Sbjct: 117 IVNIGGTMQMLG 128
>gi|285017834|ref|YP_003375545.1| single-stranded DNA-binding protein [Xanthomonas albilineans GPE
PC73]
gi|283473052|emb|CBA15557.1| probable single-stranded dna-binding protein [Xanthomonas
albilineans GPE PC73]
Length = 171
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG +T SL T +R +R + E +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQSGMAITRVSLATTSVRKDRDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|118578889|ref|YP_900139.1| single-strand binding protein [Pelobacter propionicus DSM 2379]
gi|118501599|gb|ABK98081.1| single-strand binding protein [Pelobacter propionicus DSM 2379]
Length = 143
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 15/138 (10%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G+ P + SG+ V F+L T NR E+ R +WHRV+
Sbjct: 6 KVMLIGNLGRDPEVRYTASGQAVASFNLATTEKFKNRN-------GEWEERT--EWHRVT 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK-- 200
++ RL + ++L G T+Y+EG L+ + + G+ R EI + L G+
Sbjct: 57 LWA-RLAEIAGEYLSKGKTVYIEGRLQTREYEK--DGIKRYTTEIVGEKMQMLSPKGERR 113
Query: 201 -GGDAQPPSPSEVRGAGY 217
GD+ P+P+ G GY
Sbjct: 114 SSGDSYSPAPAGTSGGGY 131
>gi|268591423|ref|ZP_06125644.1| single-strand binding protein [Providencia rettgeri DSM 1131]
gi|291313077|gb|EFE53530.1| single-strand binding protein [Providencia rettgeri DSM 1131]
Length = 173
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G + L
Sbjct: 57 RVVIFG-KLAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNIGGSMQMLG 114
Query: 199 GKGGDA 204
G+GGDA
Sbjct: 115 GRGGDA 120
>gi|148549342|ref|YP_001269444.1| single-strand binding protein [Pseudomonas putida F1]
gi|148513400|gb|ABQ80260.1| single-strand binding protein [Pseudomonas putida F1]
Length = 165
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLSNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NG + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDINGTMQLLG 112
Query: 200 KGGDAQPP 207
Q P
Sbjct: 113 SRPQGQQP 120
>gi|443468490|ref|ZP_21058702.1| Single-stranded DNA-binding protein [Pseudomonas pseudoalcaligenes
KF707]
gi|442897652|gb|ELS24531.1| Single-stranded DNA-binding protein [Pseudomonas pseudoalcaligenes
KF707]
Length = 161
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + L +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYLPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ RL + ++L GS +YVEG+L + + G+ R EI + NG++ LG
Sbjct: 56 RV-VFFGRLAEIAGEYLRKGSQVYVEGSLRTREWEK--DGVKRYTTEIVVDINGQMQLLG 112
Query: 200 ---KGGDAQPPSP 209
D P +P
Sbjct: 113 GRPGADDGAPRAP 125
>gi|407367965|ref|ZP_11114497.1| single-strand binding protein [Pseudomonas mandelii JR-1]
Length = 161
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P K L +G VT SL T +++ + TE WH
Sbjct: 37 GVNKVILVGTSGQVPEVKYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 88
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ R+ + +++V GS +Y+EG L+ + + G+ R E+ + +G L LG
Sbjct: 89 RVSLFG-RVAEIAGEYVVKGSQVYIEGKLQTREWEKD--GIKRYTTEVVVDMHGTLQLLG 145
>gi|300724705|ref|YP_003714030.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
gi|297631247|emb|CBJ91942.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
Length = 171
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R EI + G + LG
Sbjct: 57 RVVIFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEIVVNIGGTMQMLG 114
Query: 200 KGGDAQPPSPSEV 212
G A +P++
Sbjct: 115 GRGGAGQEAPAQA 127
>gi|418844635|ref|ZP_13399422.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392814266|gb|EJA70225.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
Length = 172
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +R+ E TE WH
Sbjct: 5 GVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRDRQDGEMREHTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ +L + ++L G+ +Y+EG L + + D +G + E+ + +NG + LG
Sbjct: 57 RVVVFG-KLAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVGQNGTMQMLG 114
Query: 200 K 200
+
Sbjct: 115 R 115
>gi|260751953|ref|YP_003232491.1| putative Ssb protein [Escherichia coli O26:H11 str. 11368]
gi|257757316|dbj|BAI28816.1| putative Ssb protein [Escherichia coli O26:H11 str. 11368]
Length = 182
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 11/134 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKNTGTMQMLG 114
Query: 200 KGGDAQPPSPSEVR 213
+ AQ P E +
Sbjct: 115 RAAGAQ-TQPEETQ 127
>gi|440746844|ref|ZP_20926119.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
gi|440370691|gb|ELQ07578.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
Length = 201
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|407976899|ref|ZP_11157794.1| single-strand binding protein [Nitratireductor indicus C115]
gi|407427626|gb|EKF40315.1| single-strand binding protein [Nitratireductor indicus C115]
Length = 169
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDPVVNLRIATSETWRDRQSGERRERTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
V ++ + L V ++L G+ +Y+EG L+ + + D G R EI +++ G L L
Sbjct: 57 VVIFNDNLAKVAEQYLKKGAKVYLEGQLQTRKWTDQ-NGQDRYTTEIVLQKFRGELQMLD 115
Query: 199 --GKGGDAQ 205
G+GGDAQ
Sbjct: 116 ARGQGGDAQ 124
>gi|304391778|ref|ZP_07373720.1| single-stranded DNA-binding protein [Ahrensia sp. R2A130]
gi|303296007|gb|EFL90365.1| single-stranded DNA-binding protein [Ahrensia sp. R2A130]
Length = 171
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P ++ + G+ + FS+ T +R E TE WHR++
Sbjct: 7 KVILVGNLGRDPEIRRTQDGKAIANFSIATSETWRDRNSGERREKTE--------WHRIA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
+ E L V+ +++ GS +Y+EG L+ + + D G+ + EI ++
Sbjct: 59 CFNEGLNKVIEQYVKKGSKVYIEGQLQTRKWTDN-AGVEKYTTEIVLQ 105
>gi|359407575|ref|ZP_09200052.1| single stranded DNA-binding protein [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356677614|gb|EHI49958.1| single stranded DNA-binding protein [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 165
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + + G + ++ T +R E TE WHR
Sbjct: 5 VNKVILLGNLGRDPEVRSTQDGTKIVNLNIATSERWKDRNSGEQRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ E L + ++L GST+Y+EG L+ + + D G+ + E+ ++R G L LG
Sbjct: 57 VVIFNENLARIAEQYLRKGSTVYLEGQLQTRKWTDQ-QGVEKYTTEVVLQRYRGELTLLG 115
Query: 200 KGGDAQPPSPSE 211
+ PS+
Sbjct: 116 SRNEGAAALPSD 127
>gi|319778676|ref|YP_004129589.1| ssDNA-binding protein [Taylorella equigenitalis MCE9]
gi|317108700|gb|ADU91446.1| Single-stranded DNA-binding protein [Taylorella equigenitalis MCE9]
gi|399115296|emb|CCG18095.1| single-stranded DNA-binding protein [Taylorella equigenitalis
14/56]
Length = 175
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG++G P + GR ++ S+GT + N++ E TE WHR
Sbjct: 3 VNKVILVGRLGNDPEVRSGTEGRVISTVSIGTNSVWNDKSSGERREETE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
V V+ RL + +L G+ +YVEG L+ + + D G+ R E+ I N L LG
Sbjct: 55 V-VFFNRLAEIARDYLRKGTQVYVEGRLKTRKYQDN-QGVDRYTTEV-IADN--LQMLGS 109
Query: 201 GGDAQPPSPSEVRGA 215
GD+ S G
Sbjct: 110 KGDSDGQRGSRTDGG 124
>gi|410689629|ref|YP_006963356.1| Single-stranded DNA-binding protein [Pseudomonas syringae]
gi|389596390|gb|AFK89155.1| Single-stranded DNA-binding protein [Pseudomonas syringae]
Length = 201
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPECRYLPNGTPVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLHKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|157964985|ref|YP_001499809.1| single-stranded DNA-binding protein [Rickettsia massiliae MTU5]
gi|157844761|gb|ABV85262.1| Single-stranded DNA-binding protein [Rickettsia massiliae MTU5]
Length = 152
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + G+ + SL T +R E + TE WHRV
Sbjct: 7 KVILIGNVGRDPEVRTTGEGKKIINLSLATTETWKDRITSERKERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ + L VV +++ GS +Y+EG+L+ + +ND +G + E+ ++ N +L+ L
Sbjct: 59 IFSDGLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQNFNSQLILL 114
>gi|406941947|gb|EKD74303.1| Single-stranded DNA-binding protein [uncultured bacterium]
Length = 149
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K IL+G +G+ P + +G V S+ T +++ EN+ TE WHR
Sbjct: 6 INKVILIGNLGRDPEVRYTPNGLAVANISIATTEAWKDKQSGENQERTE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+++Y RL +V ++L GS IY+EG L+ + + D TG R E+
Sbjct: 58 IALYG-RLAEIVGEYLRKGSKIYIEGRLQTRKWQDKNTGQDRYTTEV 103
>gi|432556026|ref|ZP_19792740.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
gi|431080447|gb|ELD87246.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
Length = 154
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + L +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYLPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|301648528|ref|ZP_07248251.1| single-strand binding family protein, partial [Escherichia coli MS
146-1]
gi|301073410|gb|EFK88216.1| single-strand binding family protein [Escherichia coli MS 146-1]
Length = 197
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 23 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 74
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 75 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 131
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 132 RAAGAQ 137
>gi|291288967|ref|YP_003517470.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|290792098|gb|ADD63424.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
Length = 220
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 45 GVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTE--------WH 96
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 97 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQMLG 154
>gi|410686345|ref|YP_006961618.1| single-stranded binding protein [Pseudomonas savastanoi]
gi|298160014|gb|EFI01050.1| Single-stranded DNA-binding protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|374081538|emb|CBZ40024.1| single-stranded binding protein [Pseudomonas savastanoi]
Length = 190
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDVRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|432979654|ref|ZP_20168440.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE211]
gi|433098381|ref|ZP_20284549.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE139]
gi|433123399|ref|ZP_20309012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE157]
gi|433137672|ref|ZP_20322978.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE166]
gi|431498079|gb|ELH77294.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE211]
gi|431612517|gb|ELI81743.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE139]
gi|431634831|gb|ELJ03051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE157]
gi|431651476|gb|ELJ18726.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE166]
Length = 179
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|71891820|ref|YP_277549.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71795926|gb|AAZ40677.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 163
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT S+ T +++ E + TE WH
Sbjct: 10 GINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTE--------WH 61
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG+L+ + + + G R I EI + G + LG
Sbjct: 62 RVVLFG-KLAEIASEYLHKGSQVYIEGSLKTRKWQNQ-NGQDRYITEIIVNIGGAMQMLG 119
>gi|146308890|ref|YP_001189355.1| single-strand binding protein [Pseudomonas mendocina ymp]
gi|421503855|ref|ZP_15950800.1| single-strand binding protein [Pseudomonas mendocina DLHK]
gi|145577091|gb|ABP86623.1| single-strand binding protein [Pseudomonas mendocina ymp]
gi|400345359|gb|EJO93724.1| single-strand binding protein [Pseudomonas mendocina DLHK]
Length = 162
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L SG VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV+++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVALFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLLG 112
>gi|412342147|ref|YP_006973660.1| single-strand binding protein [Klebsiella pneumoniae]
gi|414086027|ref|YP_006973875.1| ssb [Klebsiella pneumoniae]
gi|410475088|gb|AFV70326.1| single-strand binding protein [Klebsiella pneumoniae]
gi|410475303|gb|AFV70540.1| ssb [Klebsiella pneumoniae]
Length = 180
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQMLG 114
>gi|380083314|ref|YP_005351329.1| single-strand binding protein [Klebsiella pneumoniae]
gi|356596106|gb|AET17156.1| Single-strand binding protein [Klebsiella pneumoniae]
Length = 180
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGKNGTLQMLG 114
>gi|374703948|ref|ZP_09710818.1| single-strand binding protein [Pseudomonas sp. S9]
Length = 165
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLLG 112
Query: 200 -----KGGDA 204
+GGD+
Sbjct: 113 GRPNNEGGDS 122
>gi|269140524|ref|YP_003297225.1| single-strand DNA-binding protein [Edwardsiella tarda EIB202]
gi|387868996|ref|YP_005700465.1| ssDNA-binding protein [Edwardsiella tarda FL6-60]
gi|267986185|gb|ACY86014.1| single-strand DNA-binding protein [Edwardsiella tarda EIB202]
gi|304560309|gb|ADM42973.1| Single-stranded DNA-binding protein [Edwardsiella tarda FL6-60]
Length = 186
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV++Y +L + ++L GS +Y+EG L + + D +G R E+ + +G + LG
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-SGQDRYTTEVVVDISGSMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|414167647|ref|ZP_11423875.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
gi|410889979|gb|EKS37780.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
Length = 139
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T ++ E + TE WH
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDKSTGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ E + V ++L GS +Y+EG+L+ + + D G R E+AI+ G L L
Sbjct: 57 VVIFSEPICKVAEQYLRKGSKVYIEGSLQTRKWTDK-DGKDRYSTEVAIQAYGGALTMLD 115
Query: 200 KGGDAQPPS 208
D PPS
Sbjct: 116 GKSDNAPPS 124
>gi|330505176|ref|YP_004382045.1| single-strand binding protein [Pseudomonas mendocina NK-01]
gi|399522422|ref|ZP_10763086.1| ssb [Pseudomonas pseudoalcaligenes CECT 5344]
gi|328919462|gb|AEB60293.1| single-strand binding protein [Pseudomonas mendocina NK-01]
gi|399109856|emb|CCH39647.1| ssb [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 163
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L SG VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV+++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVALFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLLG 112
>gi|424914243|ref|ZP_18337607.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850419|gb|EJB02940.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 178
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G +G P ++ +SG V F+L T +R E + T+ WH +
Sbjct: 7 KVCLLGNLGADPEIRRTQSGNAVANFNLATSESWRDRTTGEKKEKTD--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
V+ E L V ++L GS +Y+EG L+ + + D G R + E+ ++ + +L+ L
Sbjct: 59 VWNEGLAKVCEQYLRKGSKVYIEGKLQTRKWQDQ-DGKDRYVTEVILQFDAKLLML 113
>gi|212710298|ref|ZP_03318426.1| hypothetical protein PROVALCAL_01357 [Providencia alcalifaciens DSM
30120]
gi|422020541|ref|ZP_16367079.1| single-stranded DNA-binding protein [Providencia alcalifaciens
Dmel2]
gi|212687105|gb|EEB46633.1| hypothetical protein PROVALCAL_01357 [Providencia alcalifaciens DSM
30120]
gi|414101178|gb|EKT62779.1| single-stranded DNA-binding protein [Providencia alcalifaciens
Dmel2]
Length = 172
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G + L
Sbjct: 57 RVVIFG-KLAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYSTEVVVNIGGSMQMLG 114
Query: 199 GKGGDA 204
G+GGDA
Sbjct: 115 GRGGDA 120
>gi|395778503|ref|ZP_10459015.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|423715185|ref|ZP_17689409.1| single-strand binding protein [Bartonella elizabethae F9251]
gi|395417711|gb|EJF84048.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|395430669|gb|EJF96711.1| single-strand binding protein [Bartonella elizabethae F9251]
Length = 147
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 10/127 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G +P K + SG V F L T ++ + TE WH V
Sbjct: 4 KVMLIGYLGDNPESKTMNSGAEVVNFRLATSESYTDKNTNQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLGKG 201
V+ L + +++L GS +YVEG L+ + + D G+ R EI + + G L L
Sbjct: 56 VFNPHLAKIALQYLHKGSKVYVEGKLQTRKWQDK-NGIDRFTTEIVLSQYKGELYLLDAK 114
Query: 202 GDAQPPS 208
+ PS
Sbjct: 115 KEQSTPS 121
>gi|432804197|ref|ZP_20038144.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE91]
gi|432921767|ref|ZP_20124852.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE173]
gi|432926003|ref|ZP_20127891.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE175]
gi|432930533|ref|ZP_20131017.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE184]
gi|433171727|ref|ZP_20356303.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE180]
gi|433193039|ref|ZP_20377049.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE90]
gi|431358096|gb|ELG44755.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE91]
gi|431437589|gb|ELH19098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE173]
gi|431447569|gb|ELH28299.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE175]
gi|431461954|gb|ELH42220.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE184]
gi|431680184|gb|ELJ46051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE180]
gi|431719511|gb|ELJ83566.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE90]
Length = 179
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|254785116|ref|YP_003072544.1| single-stranded DNA-binding protein [Teredinibacter turnerae T7901]
gi|237685420|gb|ACR12684.1| single-stranded DNA-binding protein [Teredinibacter turnerae T7901]
Length = 163
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG VT S+ T +++ +N+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPETRYMPSGGAVTNISIATSESWKDKQTGQNQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV+ + RL V ++L GS +YVEG+L + + D
Sbjct: 57 RVAFFG-RLAEVAGEYLRKGSKVYVEGSLRTRKWQD 91
>gi|222104875|ref|YP_002539364.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli chi7122]
gi|387615302|ref|YP_006162300.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|417311327|ref|ZP_12098077.1| Plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PCN033]
gi|422962334|ref|ZP_16972838.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|425382949|ref|ZP_18766893.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|432375287|ref|ZP_19618304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE12]
gi|221589300|gb|ACM18297.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli chi7122]
gi|312949147|gb|ADR29973.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|338767085|gb|EGP21955.1| Plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PCN033]
gi|371592243|gb|EHN81158.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|408291417|gb|EKJ10035.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|430901985|gb|ELC23879.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE12]
Length = 179
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|423693831|ref|ZP_17668351.1| single-strand DNA-binding protein [Pseudomonas fluorescens SS101]
gi|388002025|gb|EIK63354.1| single-strand DNA-binding protein [Pseudomonas fluorescens SS101]
Length = 171
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ E + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTNERKEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|422837093|ref|ZP_16885118.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E101]
gi|371605367|gb|EHN93983.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E101]
Length = 177
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREHTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|406898943|gb|EKD42357.1| hypothetical protein ACD_73C00191G0002 [uncultured bacterium]
Length = 149
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +GQ P + + G+ + ++ T NN++ + E TE WHR
Sbjct: 4 VNKVILVGNLGQDPEVRYTQGGQCICTLNIATNEKWNNKQTGQPEERTE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
V V+ +LG + +L G + YVEG L+ + + D G + EI + + FLG
Sbjct: 56 VVVWG-KLGELCRDYLAKGRSAYVEGRLQTRKWEDK-QGQTKYTTEIVAQ---AIQFLGS 110
Query: 201 GGDAQPPSPSEVRGAG 216
G P+ VRG G
Sbjct: 111 G-----PAAGAVRGRG 121
>gi|347758387|ref|YP_004865949.1| ssDNA-binding protein [Micavibrio aeruginosavorus ARL-13]
gi|347590905|gb|AEP09947.1| single-strand binding family protein [Micavibrio aeruginosavorus
ARL-13]
Length = 161
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++SG V S+ T +++N E R QWHR
Sbjct: 5 VNKVILVGNLGNDPDVRMMQSGGKVVNLSIAT------SESWKDKNSGERQERT--QWHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL- 198
V ++ + L V ++L G+ +Y+EG LE + + D G + E+ +R G L L
Sbjct: 57 VVIFNDNLATVAERYLKKGAKVYIEGQLETRKYTDK-DGQEKYTTEVVLRPYRGELTMLD 115
Query: 199 ---------------GKGGDAQPPSPSEVRGAG 216
G G D P+P+ G
Sbjct: 116 SRSGGGSGFGGANDMGGGADYGSPAPARAASGG 148
>gi|325272720|ref|ZP_08139073.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
gi|324102166|gb|EGB99659.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
Length = 162
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T N+++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWNDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + NG + L
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDINGTMQLL 111
>gi|262377229|ref|ZP_06070454.1| RecBCD nuclease ssDNA-binding protein [Acinetobacter lwoffii SH145]
gi|262307967|gb|EEY89105.1| RecBCD nuclease ssDNA-binding protein [Acinetobacter lwoffii SH145]
Length = 195
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ V RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|406936475|gb|EKD70186.1| Single-stranded DNA-binding protein [uncultured bacterium]
Length = 147
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P + +G V ++ T +++ E + TE WH
Sbjct: 4 GINKVILIGNLGRDPEVRYTPNGLAVANITIATSESWKDKQSGEMQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ +RL +V ++L GS IYVEG L+ + + D TG R EI
Sbjct: 56 RV-VFYQRLAEIVGEYLRKGSKIYVEGRLQTRKWQDKNTGQDRYTTEI 102
>gi|58039355|ref|YP_191319.1| single-strand DNA binding protein [Gluconobacter oxydans 621H]
gi|58001769|gb|AAW60663.1| Single-strand DNA binding protein [Gluconobacter oxydans 621H]
Length = 188
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N+++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGAKIVNLTVATSDTWNDKQSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ER V ++L G +Y+EG L + + D +G + E+ I R G LV +
Sbjct: 57 VVIFNERTADVAERYLRKGRKVYIEGELRTRKWTDQ-SGQEKYTTEVVIDRFRGDLVLI 114
>gi|49188562|ref|YP_025660.1| single-stranded binding protein [Pseudomonas syringae pv.
maculicola]
gi|422649057|ref|ZP_16712170.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|47525145|gb|AAT35159.1| single-stranded binding protein [Pseudomonas syringae pv.
maculicola]
gi|330962584|gb|EGH62844.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 186
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + +G
Sbjct: 56 RVSLFG-KIAEIAGEYLRKGSQVYIEGKLQTREWEK--DGVKRYTTEIVVDMQGTMQLIG 112
>gi|398848607|ref|ZP_10605416.1| single stranded DNA-binding protein [Pseudomonas sp. GM84]
gi|398247862|gb|EJN33296.1| single stranded DNA-binding protein [Pseudomonas sp. GM84]
Length = 165
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NG + LG
Sbjct: 56 RVSLF-GKVAEIAGEYLRKGSQCYIEGKLQTREWEK--DGIKRYTTEIIVDINGTMQLLG 112
Query: 200 KGGDAQPP 207
Q P
Sbjct: 113 SRPQGQQP 120
>gi|213579978|ref|ZP_03361804.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 146
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L + ++L GS +Y+EG L + + D +G+ + E+ + ++G + LG
Sbjct: 57 RVVLYG-KLAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGTMQMLG 114
>gi|152973541|ref|YP_001338592.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|419977188|ref|ZP_14492556.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419982910|ref|ZP_14498147.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419988705|ref|ZP_14503774.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419994502|ref|ZP_14509397.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|420000278|ref|ZP_14515017.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420006000|ref|ZP_14520595.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420011774|ref|ZP_14526203.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420017665|ref|ZP_14531923.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420023339|ref|ZP_14537465.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420029086|ref|ZP_14543026.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420034866|ref|ZP_14548624.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420040530|ref|ZP_14554121.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420046246|ref|ZP_14559679.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420052027|ref|ZP_14565286.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420057812|ref|ZP_14570922.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420063401|ref|ZP_14576326.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420069207|ref|ZP_14581949.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420074960|ref|ZP_14587537.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420080812|ref|ZP_14593211.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420086549|ref|ZP_14598692.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421912278|ref|ZP_16342005.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421916202|ref|ZP_16345785.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|425079177|ref|ZP_18482278.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425089576|ref|ZP_18492667.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|428943382|ref|ZP_19016286.1| single-strand binding protein [Klebsiella pneumoniae VA360]
gi|442557618|ref|YP_007366572.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|150958333|gb|ABR80362.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|359730413|gb|AEV55158.1| single-strand binding family protein [Klebsiella pneumoniae]
gi|397338811|gb|EJJ32114.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397339124|gb|EJJ32394.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397339360|gb|EJJ32612.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397356060|gb|EJJ48939.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397356231|gb|EJJ49084.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397358567|gb|EJJ51284.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397373256|gb|EJJ65706.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397374319|gb|EJJ66663.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397378593|gb|EJJ70802.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397389504|gb|EJJ81439.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397391219|gb|EJJ83091.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397396548|gb|EJJ88236.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397407119|gb|EJJ98519.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397407135|gb|EJJ98534.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397415187|gb|EJK06376.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397423727|gb|EJK14650.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397424754|gb|EJK15645.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397431577|gb|EJK22250.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397439463|gb|EJK29908.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397445419|gb|EJK35662.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405588900|gb|EKB62499.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405599106|gb|EKB72287.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|410113832|emb|CCM84630.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410121491|emb|CCM88410.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|426296837|gb|EKV59407.1| single-strand binding protein [Klebsiella pneumoniae VA360]
gi|440685666|gb|AGC23633.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae]
Length = 180
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQAYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQMLG 114
>gi|294083970|ref|YP_003550727.1| single-stranded DNA-binding protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663542|gb|ADE38643.1| Single-stranded DNA-binding protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 168
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K LVG +G+ P + + G + SL T +R E TE WHR
Sbjct: 5 VNKVTLVGNLGRDPEVRSTQDGAKIVQLSLATSERWKDRNTGEQRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E LG + ++L GST Y+EG L+ + + D G+ + E+ ++R G L L
Sbjct: 57 VVIFNENLGRIAEQYLRKGSTCYIEGQLQTRKWTDN-QGVEKYTTEVVLQRYRGELTLL 114
>gi|406980293|gb|EKE01918.1| hypothetical protein ACD_21C00025G0029 [uncultured bacterium]
Length = 161
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + SG V SL T +++ E ++ TE WH
Sbjct: 4 GVNKVILIGNLGNDPEVRYTPSGSAVATVSLATSETWRDKQSGEMQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ RL +V ++L GS IY+EG+L + + D +G+ R EI L
Sbjct: 56 RV-VFFNRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-SGMERYTTEIIANEMHMLDSRS 113
Query: 200 KGGDAQ 205
GG ++
Sbjct: 114 SGGSSK 119
>gi|423097613|ref|ZP_17085409.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q2-87]
gi|397886352|gb|EJL02835.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q2-87]
Length = 173
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|378976117|ref|YP_005229748.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|365803960|gb|AEW92181.1| single-strand binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
Length = 180
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVVNLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQMLG 114
>gi|309798193|ref|ZP_07692559.1| single-strand binding family protein [Escherichia coli MS 145-7]
gi|308118220|gb|EFO55482.1| single-strand binding family protein [Escherichia coli MS 145-7]
Length = 192
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 127 RAAGAQ 132
>gi|451941924|ref|YP_007462561.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451941925|ref|YP_007462562.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901311|gb|AGF75773.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901312|gb|AGF75774.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 150
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G +P K + SG + F + T +++ + TE WH V
Sbjct: 4 KVTLIGRLGANPESKTMTSGAEIVNFRMATSESYTDKKTNQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G R EI + G L L K
Sbjct: 56 VFNPHLAKIALQYLNKGSKVYIEGKLQTRKWKDK-NGYDRYSTEIVLPHFKGELYLLDAK 114
Query: 201 GGDAQPPSPSEVRGAGY 217
+ P+PS + Y
Sbjct: 115 KEQSASPTPSSITSQSY 131
>gi|421853748|ref|ZP_16286408.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371477998|dbj|GAB31611.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 162
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG+ + F+L T N+R+ E TE WHR
Sbjct: 5 VNKVILVGNLGKDPEVRHSQSGQKIVSFTLATSDTWNDRQSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
+ ++ ERL V + L G +Y+EG+L+ + +
Sbjct: 57 IVIFNERLADVAERFLRKGRKVYLEGSLQTRKW 89
>gi|197286576|ref|YP_002152448.1| single-strand binding protein [Proteus mirabilis HI4320]
gi|425069688|ref|ZP_18472803.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
gi|425071141|ref|ZP_18474247.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
gi|134914|sp|P28046.2|SSB_PROMI RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|45638|emb|CAA46206.1| single-stranded DNA-binding protein [Proteus mirabilis]
gi|194684063|emb|CAR45413.1| single-strand binding protein [Proteus mirabilis HI4320]
gi|404596264|gb|EKA96785.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
gi|404599966|gb|EKB00419.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
Length = 174
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ + G + L
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVNIGGTMQMLG 114
Query: 199 GKGGDAQPPS 208
G+GG PS
Sbjct: 115 GRGGQDNAPS 124
>gi|330812044|ref|YP_004356506.1| single-strand binding protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378953152|ref|YP_005210640.1| protein Ssb [Pseudomonas fluorescens F113]
gi|423699604|ref|ZP_17674094.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q8r1-96]
gi|327380152|gb|AEA71502.1| putative single-strand binding protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|359763166|gb|AEV65245.1| Ssb [Pseudomonas fluorescens F113]
gi|387997115|gb|EIK58445.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q8r1-96]
Length = 173
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|58000347|ref|YP_190159.1| single-stranded DNA-binding protein [Escherichia coli]
gi|169546540|ref|YP_001711979.1| single-stranded DNA-binding protein [Escherichia coli]
gi|419218912|ref|ZP_13761889.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8D]
gi|422820413|ref|ZP_16868620.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|432561376|ref|ZP_19798020.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE51]
gi|433201150|ref|ZP_20385012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|57903247|gb|AAW58877.1| single-stranded DNA binding protein [Escherichia coli]
gi|168831092|gb|ACA34873.1| Ssb [Escherichia coli]
gi|378055845|gb|EHW18105.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8D]
gi|385536087|gb|EIF82999.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|431102903|gb|ELE07575.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE51]
gi|431714460|gb|ELJ78647.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
Length = 179
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|54296392|ref|YP_122761.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Legionella pneumophila str. Paris]
gi|397662924|ref|YP_006504462.1| ssDNA-binding protein [Legionella pneumophila subsp. pneumophila]
gi|397666036|ref|YP_006507573.1| ssDNA-binding protein [Legionella pneumophila subsp. pneumophila]
gi|53750177|emb|CAH11569.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella pneumophila str. Paris]
gi|395126335|emb|CCD04516.1| Single-stranded DNA-binding protein [Legionella pneumophila subsp.
pneumophila]
gi|395129447|emb|CCD07677.1| Single-stranded DNA-binding protein [Legionella pneumophila subsp.
pneumophila]
Length = 159
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|226326600|ref|ZP_03802118.1| hypothetical protein PROPEN_00450 [Proteus penneri ATCC 35198]
gi|225205025|gb|EEG87379.1| single-strand binding family protein [Proteus penneri ATCC 35198]
Length = 210
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 41 GVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTE--------WH 92
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ + G + L
Sbjct: 93 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVNIGGTMQMLG 150
Query: 199 GKGGDAQPPS 208
G+GG PS
Sbjct: 151 GRGGQDSAPS 160
>gi|389681721|ref|ZP_10173065.1| single-strand DNA-binding protein [Pseudomonas chlororaphis O6]
gi|425901849|ref|ZP_18878440.1| single-strand DNA-binding protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|388554256|gb|EIM17505.1| single-strand DNA-binding protein [Pseudomonas chlororaphis O6]
gi|397892802|gb|EJL09278.1| single-strand DNA-binding protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 170
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLLG 112
>gi|300825069|ref|ZP_07105165.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|301304391|ref|ZP_07210504.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|415866795|ref|ZP_11539178.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|300522469|gb|EFK43538.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|300840378|gb|EFK68138.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|315253234|gb|EFU33202.1| single-strand binding family protein [Escherichia coli MS 85-1]
Length = 192
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 127 RAAGAQ 132
>gi|323138614|ref|ZP_08073681.1| single-strand binding protein [Methylocystis sp. ATCC 49242]
gi|322396102|gb|EFX98636.1| single-strand binding protein [Methylocystis sp. ATCC 49242]
Length = 171
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + SG V FSL T ++ E ++ TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTFPSGDRVVSFSLATTESWRDKATGERKDRTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL 198
V ++ E LG + ++ G+ IY+EG L+ + + D G R++ E+ + R G + L
Sbjct: 57 VQIFNEALGKIAEQYCRKGAKIYLEGQLQTREYTDK-DGNQRKVTEVVVPRFRGEMTLL 114
>gi|52840601|ref|YP_094400.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378776302|ref|YP_005184734.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52627712|gb|AAU26453.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507111|gb|AEW50635.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 162
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 7 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 58
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 59 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 93
>gi|227357651|ref|ZP_03842004.1| single-strand binding protein [Proteus mirabilis ATCC 29906]
gi|227162361|gb|EEI47365.1| single-strand binding protein [Proteus mirabilis ATCC 29906]
Length = 207
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 38 GVNKVILIGNLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTE--------WH 89
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ + G + L
Sbjct: 90 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVNIGGTMQMLG 147
Query: 199 GKGGDAQPPS 208
G+GG PS
Sbjct: 148 GRGGQDNAPS 157
>gi|428937163|ref|ZP_19010491.1| single-stranded DNA-binding protein [Klebsiella pneumoniae JHCK1]
gi|426296839|gb|EKV59408.1| single-stranded DNA-binding protein [Klebsiella pneumoniae JHCK1]
Length = 180
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG + LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTMQMLG 114
Query: 200 KGGDAQPPSPS 210
+A P +
Sbjct: 115 GRREAGVPESA 125
>gi|406035966|ref|ZP_11043330.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 198
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWVDKNSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V P RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLPNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|238921392|ref|YP_002934907.1| single-stranded DNA-binding protein, putative [Edwardsiella
ictaluri 93-146]
gi|238870961|gb|ACR70672.1| single-stranded DNA-binding protein, putative [Edwardsiella
ictaluri 93-146]
Length = 182
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV++Y +L + ++L GS +Y+EG L + + D +G R E+ + +G + LG
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-SGQDRYTTEVVVDISGSMQMLG 114
>gi|422296853|ref|ZP_16384505.1| Single-stranded DNA-binding protein [Pseudomonas avellanae BPIC
631]
gi|407991890|gb|EKG33638.1| Single-stranded DNA-binding protein [Pseudomonas avellanae BPIC
631]
Length = 197
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|336233445|ref|YP_004590191.1| single-strand DNA-binding protein [Buchnera aphidicola (Cinara
tujafilina)]
gi|335345386|gb|AEH39932.1| single-strand DNA-binding protein [Buchnera aphidicola (Cinara
tujafilina)]
Length = 178
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T ++ E TE WH
Sbjct: 5 GINKVILIGNLGQDPDLRYMPNGTAVANINLATSDTWKDKNTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + K+L G+ +Y+EG+L+ + + D G+ R EI + G + LG
Sbjct: 57 RVVLFG-KLAEIAGKYLKKGAQVYIEGSLQTRKWQDQ-NGIDRYTTEIIVSITGTMQMLG 114
>gi|440802075|gb|ELR23014.1| singlestrand binding protein family [Acanthamoeba castellanii str.
Neff]
Length = 168
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGR-TVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G G P + G +VT F L T I N+ P QW
Sbjct: 29 GINKVILLGNAGAEPKMRTYNDGTASVTYFPLATNQIYTNKSGERVNKP---------QW 79
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVF 197
H + +Y + L V K + GS +YVEG L + + D TG + I EI + + G L
Sbjct: 80 HNIVIYNDNLSQVAQKTVKKGSLVYVEGALSTRTYKDA-TGAEKTICEIILPKYKGDLNV 138
Query: 198 LGK 200
L K
Sbjct: 139 LSK 141
>gi|399006310|ref|ZP_10708837.1| single stranded DNA-binding protein [Pseudomonas sp. GM17]
gi|398122476|gb|EJM12068.1| single stranded DNA-binding protein [Pseudomonas sp. GM17]
Length = 170
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMF-GKVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLLG 112
>gi|312116029|ref|YP_004013625.1| single-strand binding protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221158|gb|ADP72526.1| single-strand binding protein [Rhodomicrobium vannielii ATCC 17100]
Length = 182
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P + + GR++ L T +++ E TE WH
Sbjct: 5 VNKVILIGNLGADPEVRHTQDGRSICNLRLATTDSWRDKQSGERREKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
+ ++ E+LG V ++L G+ +Y+EG L+ + + D G R E+ ++ NG+L L
Sbjct: 57 IVIFNEQLGKVAQQYLRKGAKVYIEGQLQTRKWQDN-AGNDRYTTEVVLQNYNGQLTML 114
>gi|432473751|ref|ZP_19715781.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE206]
gi|433080869|ref|ZP_20267351.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE131]
gi|430994393|gb|ELD10723.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE206]
gi|431589956|gb|ELI61071.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE131]
Length = 179
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQPPSPSEVR 213
+ AQ P E +
Sbjct: 114 RAAGAQ-TQPEEAQ 126
>gi|419167624|ref|ZP_13712043.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7A]
gi|419183967|ref|ZP_13727532.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|419189605|ref|ZP_13733091.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|378019870|gb|EHV82663.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|378020055|gb|EHV82825.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7A]
gi|378021436|gb|EHV84139.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
Length = 179
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQPPSPSEVR 213
+ AQ P E +
Sbjct: 114 RAAGAQ-TQPEEAQ 126
>gi|160872092|ref|ZP_02062224.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Rickettsiella grylli]
gi|159120891|gb|EDP46229.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Rickettsiella grylli]
Length = 152
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 12/132 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + + +G V +L T +++N E R +WH
Sbjct: 4 GINKVILIGNLGADPEIRHMPNGTAVAHINLATS------ESWKDKNTGELQERT--EWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ +RL +V ++L G+ +Y+EG L+ + + D TG R EI L G
Sbjct: 56 RIVLF-QRLAEIVAEYLKKGAKVYIEGRLQTRKWQDKTTGHDRYTTEIIANEMQMLDSRG 114
Query: 200 KG---GDAQPPS 208
G+A P S
Sbjct: 115 SNTVPGEASPAS 126
>gi|25091285|sp|Q8K933.1|SSB_BUCAP RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21623439|gb|AAM68068.1| single-strand binding protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 162
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ +L + ++L GS +Y+EG+L+ + + D GL R E+ + G + LG
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGLERYTTEVIVNIGGTMQMLG 114
>gi|440509613|ref|YP_007347049.1| single-stranded DNA-binding protein [Candidatus Blochmannia
chromaiodes str. 640]
gi|440453826|gb|AGC03318.1| single-stranded DNA-binding protein [Candidatus Blochmannia
chromaiodes str. 640]
Length = 158
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT S+ T +++ E + TE WH
Sbjct: 5 GINKVILIGYLGQEPEVRYMSSGSMVTNISVATTESWKDKQTNEFKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG+L+ + + + G R I EI + G + LG
Sbjct: 57 RVVLFG-KLAEIASEYLHKGSQVYIEGSLKTRKWQNQ-NGQDRYITEIIVSIGGAMQMLG 114
>gi|421693730|ref|ZP_16133363.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-692]
gi|404570367|gb|EKA75444.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-692]
Length = 193
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 16/134 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP-----ITGLVR--RIREIAIRRN 192
R+ ++ RLG + + L GS +Y+EG+L + + D T +R +++ + R+
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQ 113
Query: 193 GRLVFLGKGGDAQP 206
G F G QP
Sbjct: 114 GEQSFAGGNDFNQP 127
>gi|329998235|ref|ZP_08303007.1| single-strand binding family protein, partial [Klebsiella sp. MS
92-3]
gi|328538799|gb|EGF64876.1| single-strand binding family protein [Klebsiella sp. MS 92-3]
Length = 198
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 23 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 74
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ Y+EG L + + D G+ R + E+ + +NG L LG
Sbjct: 75 RVVMFG-KLAEVAGEYLRKGAQAYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTLQMLG 132
>gi|302595315|ref|YP_003829030.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302310051|gb|ADL13924.1| Ssb [Escherichia coli]
Length = 214
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 40 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 91
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 92 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 148
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 149 RAAGAQ 154
>gi|37528177|ref|NP_931522.1| single-strand DNA-binding protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787614|emb|CAE16721.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 178
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-NGQERYTTEVVVNMGGTMQMLG 114
>gi|425084517|ref|ZP_18487612.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405596784|gb|EKB70115.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
Length = 180
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG + LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTMQMLG 114
>gi|432864748|ref|ZP_20088059.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
gi|431402970|gb|ELG86272.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
Length = 154
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|331652609|ref|ZP_08353620.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli M718]
gi|331049715|gb|EGI21781.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli M718]
Length = 192
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 127 RAAGAQ 132
>gi|296105904|ref|YP_003617604.1| single-strand DNA-binding protein [Legionella pneumophila 2300/99
Alcoy]
gi|295647805|gb|ADG23652.1| single-strand DNA-binding protein [Legionella pneumophila 2300/99
Alcoy]
Length = 159
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|410654984|ref|YP_006957501.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
salamae]
gi|389597706|gb|AFK90455.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
salamae]
Length = 184
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVIIVGNLGQDPEVRYMPNGGAVASLSLATSESWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L G+ +Y+EG L + + D +G+ R + EI + +NG + LG
Sbjct: 57 RVVLFG-KLVEIASEYLRKGAQVYIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGTMQMLG 114
Query: 200 KGGDAQPP 207
D P
Sbjct: 115 GRRDGGQP 122
>gi|417637202|ref|ZP_12287395.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|345380973|gb|EGX12864.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
Length = 176
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGITRYITEILVKTTGTMQMLG 114
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 115 RAAGTQTQPEEAQQFSG 131
>gi|307609164|emb|CBW98621.1| single-strand binding protein [Legionella pneumophila 130b]
Length = 159
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|432639083|ref|ZP_19874945.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE81]
gi|431167841|gb|ELE68096.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE81]
Length = 179
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|395491201|ref|ZP_10422780.1| single-stranded DNA-binding protein (SSB) [Sphingomonas sp. PAMC
26617]
Length = 186
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I+VG +G+ P K ++G V + T ++ E + TE WH V+
Sbjct: 7 KVIIVGNLGRDPESKSFQNGGKVVNLRIATSETWKDKNSGERKEQTE--------WHSVA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E LGGV ++L GS +Y+EG L+ + + D G R EI ++ NG L L
Sbjct: 59 IFNEALGGVAERYLRKGSKVYIEGALKTRKWQDA-QGQDRYSTEIVLQGFNGVLTML 114
>gi|163868148|ref|YP_001609352.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161017799|emb|CAK01357.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 153
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P K + SG + F + T ++ + + TE WH V
Sbjct: 9 KVILIGYLGADPESKTMNSGAEIVNFRMATSESYTDKNTHQKVDKTE--------WHSVV 60
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGG 202
V+ L + +++L GS +Y+EG L+ + + D G R EI + + + L
Sbjct: 61 VFNPHLAKIALQYLHKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLSQYKGELHLLDAK 119
Query: 203 DAQPPSPSEVRGAGY 217
Q PS + Y
Sbjct: 120 KEQSAHPSPITSQSY 134
>gi|193070216|ref|ZP_03051161.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|417665125|ref|ZP_12314702.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|432658713|ref|ZP_19894394.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE111]
gi|192956535|gb|EDV86993.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|330907838|gb|EGH36363.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|431205871|gb|ELF04310.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE111]
Length = 179
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|406039922|ref|ZP_11047277.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 108
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
P + K IL+G +G+ P K+ +G +VT FSL T ++ E + TE W
Sbjct: 2 PNVNKVILMGVLGRDPETKQFPNGGSVTTFSLATSEHWKDKTTNERKEVTE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
HR+ V RL + K+L GS Y+EG+L + + D G+ R + EI
Sbjct: 54 HRI-VTSNRLAEIASKYLKKGSKAYIEGSLRTRKWKDQ-NGIDREVTEI 100
>gi|333369819|ref|ZP_08461914.1| single-stranded DNA-binding protein [Psychrobacter sp. 1501(2011)]
gi|332969465|gb|EGK08485.1| single-stranded DNA-binding protein [Psychrobacter sp. 1501(2011)]
Length = 219
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I++G +G P ++ +G +VT S+ T +++ E R A +WH
Sbjct: 3 GINKVIIIGNLGADPETRQFSNGGSVTNISVATSEQWTDKQTGEK--------REATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+S++ RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RISLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKWQDQ-NGQDRYTTEI 100
>gi|390448063|ref|ZP_10233686.1| single-strand binding protein [Nitratireductor aquibiodomus RA22]
gi|389666702|gb|EIM78146.1| single-strand binding protein [Nitratireductor aquibiodomus RA22]
Length = 165
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDPVVNMRIATSETWRDRQSGERRERTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
V ++ + L V ++L G+ +Y+EG L+ + + D G R E+ +++ G L L
Sbjct: 57 VVIFNDNLAKVAEQYLKKGAKVYIEGQLQTRKWTDQ-NGQERYTTEVVLQKFRGELQMLD 115
Query: 199 --GKGGDAQ 205
G+GGD+Q
Sbjct: 116 TRGQGGDSQ 124
>gi|417262930|ref|ZP_12050391.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 2.3916]
gi|386223449|gb|EII45811.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 2.3916]
Length = 179
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWGD--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|419304330|ref|ZP_13846255.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11D]
gi|419314610|ref|ZP_13856453.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11E]
gi|378152321|gb|EHX13421.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11E]
gi|378154992|gb|EHX16053.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11D]
Length = 177
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|410653202|ref|YP_006956490.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|410653804|ref|YP_006957092.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|417136945|ref|ZP_11980826.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0259]
gi|381288334|gb|AFG21226.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|381288498|gb|AFG21389.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|386159422|gb|EIH15751.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0259]
Length = 150
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RVAGAQTQPEEGQQFSG 130
>gi|146276503|ref|YP_001166662.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17025]
gi|145554744|gb|ABP69357.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17025]
Length = 162
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR--RNGRLVFL 198
V+++ E L V ++L GST+Y+EG LE + + D +G R E+ +R R+ +
Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYTTEVVLRPFRSALTMLG 115
Query: 199 GKGGDAQPPSPSEVRGA 215
G+G A E RG
Sbjct: 116 GRGDSAGSGGGYEDRGG 132
>gi|194446891|ref|YP_002038934.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|218534521|ref|YP_002401051.1| single-stranded DNA-binding protein [Escherichia coli S88]
gi|237702649|ref|ZP_04533130.1| single-stranded DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|419943469|ref|ZP_14460020.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|422752443|ref|ZP_16806344.1| single-strand binding protein [Escherichia coli H252]
gi|432362212|ref|ZP_19605392.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE5]
gi|432383078|ref|ZP_19626012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE15]
gi|432406393|ref|ZP_19649109.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|432406536|ref|ZP_19649249.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|432421301|ref|ZP_19663855.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE178]
gi|432597152|ref|ZP_19833431.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE62]
gi|432757778|ref|ZP_19992311.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE22]
gi|432780898|ref|ZP_20015116.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE59]
gi|432787142|ref|ZP_20021279.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE65]
gi|432828081|ref|ZP_20061729.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|433012137|ref|ZP_20200533.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE229]
gi|433166676|ref|ZP_20351373.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE179]
gi|194358643|gb|ACF57086.1| plasmid-derived single-stranded DNA-binding protein [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|218349725|emb|CAQ87118.1| Single-stranded DNA-binding protein [Escherichia coli S88]
gi|226903235|gb|EEH89494.1| single-stranded DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|323948858|gb|EGB44754.1| single-strand binding protein [Escherichia coli H252]
gi|388420977|gb|EIL80615.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|430888472|gb|ELC11189.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE5]
gi|430905089|gb|ELC26766.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE15]
gi|430930882|gb|ELC51369.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|430931035|gb|ELC51505.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|430946415|gb|ELC66344.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE178]
gi|431132250|gb|ELE34264.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE62]
gi|431297463|gb|ELF87116.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE22]
gi|431324005|gb|ELG11462.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE59]
gi|431339540|gb|ELG26600.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE65]
gi|431371314|gb|ELG57098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|431515765|gb|ELH93581.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE229]
gi|431680408|gb|ELJ46240.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE179]
Length = 210
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RVAGAQTQPEEGQQFSG 130
>gi|54293348|ref|YP_125763.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Legionella pneumophila str. Lens]
gi|53753180|emb|CAH14627.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella pneumophila str. Lens]
Length = 159
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|425286462|ref|ZP_18677420.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|408195196|gb|EKI20615.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
Length = 179
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|374325458|ref|YP_005083655.1| putative single strand binding protein Ssb [Pseudomonas sp. MC1]
gi|359392982|gb|AEV45858.1| putative single strand binding protein Ssb [Pseudomonas sp. MC1]
Length = 169
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEKWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLLG 112
>gi|197104857|ref|YP_002130234.1| single-strand binding protein [Phenylobacterium zucineum HLK1]
gi|196478277|gb|ACG77805.1| single-strand binding protein [Phenylobacterium zucineum HLK1]
Length = 160
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRSLNSGDRVANLRIATSETWRDRSTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L V +L GST+Y+EG+L+ + + D +G + EI +++ G L L
Sbjct: 57 VVIFNENLVKVAENYLRKGSTVYIEGSLQTRKWTDQ-SGQEKYSTEIVLQKFRGELTML 114
>gi|163867619|ref|YP_001608818.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161017265|emb|CAK00823.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 148
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G +P K + SG + FS+ T +++ + TE WH +
Sbjct: 4 KVTLIGRLGANPESKTMTSGAEIVNFSIATSESYTDKKTNQKVEKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGG 202
V+ L + +++L GS +Y+EG L+ + + D G R EI + + + L
Sbjct: 56 VFNPHLAKIALQYLSKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLSQYKGELHLLDAK 114
Query: 203 DAQPPSPSEVRGAGY 217
Q PS + Y
Sbjct: 115 KEQSAHPSPITSQSY 129
>gi|146340931|ref|YP_001205979.1| single-stranded DNA-binding protein [Bradyrhizobium sp. ORS 278]
gi|146193737|emb|CAL77754.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 278]
Length = 165
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L GST+Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGSTVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|422793078|ref|ZP_16845776.1| single-strand binding protein [Escherichia coli TA007]
gi|323970418|gb|EGB65683.1| single-strand binding protein [Escherichia coli TA007]
gi|380248715|emb|CBW53109.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Hadar]
Length = 185
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 26/148 (17%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V SL T +++ E + TE W
Sbjct: 5 GVNKVILIGHLGQDPDIRYFPNGGGVVANLSLATSDTWRDKQSGEMKEVTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV +Y +L V ++L GS +Y+EG L+ + + D G+ R E+ + NG + L
Sbjct: 57 HRVVLYG-KLAEVACEYLHKGSQVYIEGQLKTRKWFDQQNGVDRYSTEVVVGVNGVMQML 115
Query: 199 G----------------KGGDAQPPSPS 210
G +GG QPP +
Sbjct: 116 GSSRQQGASGNGASAPAQGGQGQPPKTT 143
>gi|445490032|ref|ZP_21459040.1| single-stranded DNA-binding protein [Acinetobacter baumannii
AA-014]
gi|444766474|gb|ELW90749.1| single-stranded DNA-binding protein [Acinetobacter baumannii
AA-014]
Length = 193
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|148361028|ref|YP_001252235.1| single-strand binding protein [Legionella pneumophila str. Corby]
gi|148282801|gb|ABQ56889.1| Single-strand binding protein (SSB) (Helix- destabilizing protein)
[Legionella pneumophila str. Corby]
Length = 159
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|424751162|ref|ZP_18179195.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421939789|gb|EKT97298.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
Length = 179
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|262380491|ref|ZP_06073645.1| single-strand binding protein [Acinetobacter radioresistens SH164]
gi|262297937|gb|EEY85852.1| single-strand binding protein [Acinetobacter radioresistens SH164]
Length = 194
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI---------AIR 190
R+ V RLG + ++L GS +Y+EG+L + + D G R EI + R
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEIRGEQMQMLDSGR 112
Query: 191 RNGRLVFLGKGGD 203
+ G G GGD
Sbjct: 113 QQGDQAGAGFGGD 125
>gi|357032124|ref|ZP_09094064.1| single-strand DNA binding protein [Gluconobacter morbifer G707]
gi|356414351|gb|EHH67998.1| single-strand DNA binding protein [Gluconobacter morbifer G707]
Length = 183
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + +SG + ++ T N+R+ E TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRNTQSGTKIVNLTVATSDTWNDRQSGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ ER V + L G +Y+EG L + + D +G + E+ I R G LV +
Sbjct: 57 VVIFNERTADVAERFLRKGRKVYIEGELRTRKWTDQ-SGQEKYTTEVVIDRFRGDLVLI 114
>gi|410609665|ref|YP_006953846.1| Ssb [Escherichia coli]
gi|385721324|gb|AFI72829.1| Ssb [Escherichia coli]
Length = 214
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 40 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 91
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 92 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 148
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 149 RAAGAQ 154
>gi|290476871|ref|YP_003469782.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
gi|289176215|emb|CBJ83020.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
Length = 175
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D G R E+ + G + LG
Sbjct: 57 RVVIF-GKLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-GGQERYTTEVVVNIGGSMQMLG 114
Query: 200 KGGDAQPPSPSE 211
G A +P++
Sbjct: 115 GRGGASQDAPAQ 126
>gi|402698216|ref|ZP_10846195.1| protein Ssb [Pseudomonas fragi A22]
Length = 177
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLLG 112
>gi|169634709|ref|YP_001708445.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii SDF]
gi|169153501|emb|CAP02660.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii]
Length = 193
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|169794398|ref|YP_001712191.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AYE]
gi|213159026|ref|YP_002321024.1| single-strand binding protein [Acinetobacter baumannii AB0057]
gi|215481953|ref|YP_002324135.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
AB307-0294]
gi|239503874|ref|ZP_04663184.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB900]
gi|260557951|ref|ZP_05830164.1| single-stranded DNA-binding protein [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|301345189|ref|ZP_07225930.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB056]
gi|301510680|ref|ZP_07235917.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB058]
gi|301595812|ref|ZP_07240820.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB059]
gi|332854789|ref|ZP_08435552.1| single-strand binding family protein [Acinetobacter baumannii
6013150]
gi|332868901|ref|ZP_08438478.1| single-strand binding family protein [Acinetobacter baumannii
6013113]
gi|403673311|ref|ZP_10935612.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter sp. NCTC
10304]
gi|417550359|ref|ZP_12201438.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-18]
gi|417563883|ref|ZP_12214757.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC143]
gi|417574592|ref|ZP_12225446.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC-5]
gi|421620973|ref|ZP_16061901.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|421624177|ref|ZP_16065050.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC098]
gi|421641981|ref|ZP_16082512.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|421647693|ref|ZP_16088104.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|421650392|ref|ZP_16090769.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC0162]
gi|421654745|ref|ZP_16095072.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-72]
gi|421659878|ref|ZP_16100094.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-83]
gi|421663123|ref|ZP_16103277.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC110]
gi|421673663|ref|ZP_16113600.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|421680136|ref|ZP_16119995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC111]
gi|421690350|ref|ZP_16130021.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-116]
gi|421698353|ref|ZP_16137895.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|421789871|ref|ZP_16226115.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
gi|421797130|ref|ZP_16233178.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-21]
gi|421800179|ref|ZP_16236158.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC1]
gi|421807215|ref|ZP_16243076.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC035]
gi|424058346|ref|ZP_17795843.1| single-strand binding protein [Acinetobacter baumannii Ab33333]
gi|445410638|ref|ZP_21432954.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-57]
gi|169147325|emb|CAM85186.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AYE]
gi|193078632|gb|ABO13676.2| RecBCD nuclease ssDNA-binding protein [Acinetobacter baumannii ATCC
17978]
gi|213058186|gb|ACJ43088.1| single-strand binding protein [Acinetobacter baumannii AB0057]
gi|213986980|gb|ACJ57279.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
AB307-0294]
gi|260408742|gb|EEX02047.1| single-stranded DNA-binding protein [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|332727791|gb|EGJ59195.1| single-strand binding family protein [Acinetobacter baumannii
6013150]
gi|332733049|gb|EGJ64250.1| single-strand binding family protein [Acinetobacter baumannii
6013113]
gi|395555639|gb|EJG21640.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC143]
gi|400210160|gb|EJO41130.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC-5]
gi|400386184|gb|EJP49258.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-18]
gi|404564622|gb|EKA69801.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-116]
gi|404572653|gb|EKA77695.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|404665588|gb|EKB33550.1| single-strand binding protein [Acinetobacter baumannii Ab33333]
gi|408510516|gb|EKK12178.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-72]
gi|408510910|gb|EKK12569.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC0162]
gi|408514733|gb|EKK16339.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|408515887|gb|EKK17466.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|408699833|gb|EKL45308.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|408701745|gb|EKL47167.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC098]
gi|408707211|gb|EKL52505.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-83]
gi|408714151|gb|EKL59306.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC110]
gi|410385881|gb|EKP38365.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|410390118|gb|EKP42520.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC111]
gi|410396996|gb|EKP49250.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
gi|410397625|gb|EKP49871.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-21]
gi|410408387|gb|EKP60355.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC1]
gi|410416857|gb|EKP68628.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC035]
gi|444779811|gb|ELX03784.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-57]
gi|452952924|gb|EME58348.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
MSP4-16]
Length = 193
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|304413599|ref|ZP_07395043.1| single-stranded DNA-binding protein [Candidatus Regiella
insecticola LSR1]
gi|304283690|gb|EFL92084.1| single-stranded DNA-binding protein [Candidatus Regiella
insecticola LSR1]
Length = 177
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G VT +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVTNITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGTLQTRKWQDQ-SGQDRYTTEVVVNVGGTMQMLG 114
>gi|417554211|ref|ZP_12205280.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-81]
gi|417560324|ref|ZP_12211203.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|421199594|ref|ZP_15656755.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|421455651|ref|ZP_15904995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-123]
gi|421635190|ref|ZP_16075793.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-13]
gi|421803782|ref|ZP_16239694.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-694]
gi|395522906|gb|EJG10995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|395564591|gb|EJG26242.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|400211889|gb|EJO42851.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-123]
gi|400390628|gb|EJP57675.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-81]
gi|408702742|gb|EKL48150.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-13]
gi|410412248|gb|EKP64107.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-694]
Length = 193
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|71729330|gb|EAO31446.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 147
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV + +LG + ++L GS Y+EG + D TG R + EI ++ LG
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGAIRY----DKFTGQERYVTEIIA---DQMHMLG 106
Query: 200 KGGDAQPPSP 209
G+ SP
Sbjct: 107 GRGEGSKGSP 116
>gi|367471946|ref|ZP_09471543.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 285]
gi|365275785|emb|CCD84011.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 285]
Length = 164
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L GST+Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGSTVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|419889737|ref|ZP_14410090.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|420093594|ref|ZP_14605241.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
gi|388356686|gb|EIL21376.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|394398791|gb|EJE74929.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
Length = 178
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGATRYITEILVKTTGTMQMLG 114
Query: 200 KGGDAQPPSPSEVR 213
+ AQ P E +
Sbjct: 115 RAAGAQ-TQPEEAQ 127
>gi|209916870|ref|YP_002291190.1| single-stranded DNA-binding protein [Escherichia coli SE11]
gi|209915296|dbj|BAG80368.1| single-stranded DNA binding protein [Escherichia coli SE11]
Length = 179
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|424057701|ref|ZP_17795218.1| single-strand binding protein [Acinetobacter nosocomialis Ab22222]
gi|445438607|ref|ZP_21441430.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC021]
gi|407440217|gb|EKF46735.1| single-strand binding protein [Acinetobacter nosocomialis Ab22222]
gi|444752938|gb|ELW77608.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC021]
Length = 194
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ ++ RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTD 89
>gi|50086413|ref|YP_047923.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ADP1]
gi|49532389|emb|CAG70101.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ADP1]
Length = 192
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|385873092|gb|AFI91612.1| Single-stranded DNA-binding protein [Pectobacterium sp. SCC3193]
Length = 182
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K L+G +GQ P + + +G VT ++ T +++ E + TE WH
Sbjct: 5 GVNKVTLIGFLGQDPEVRYMPNGNAVTGITMATSETWRDKQTGEEKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + LG
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDS-AGVDRWTTEIVVSQRGTMQMLG 114
>gi|365888818|ref|ZP_09427555.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3809]
gi|365335477|emb|CCE00086.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3809]
Length = 165
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHRV
Sbjct: 7 KVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGERKEKTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
++ E L V ++L GST+Y+EG L+ + + D +G+ + E+ ++
Sbjct: 59 IFNEGLCKVAEQYLKKGSTVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|398891092|ref|ZP_10644532.1| single stranded DNA-binding protein [Pseudomonas sp. GM55]
gi|398187327|gb|EJM74671.1| single stranded DNA-binding protein [Pseudomonas sp. GM55]
Length = 171
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLLG 112
>gi|325918919|ref|ZP_08180990.1| single-strand binding protein [Xanthomonas vesicatoria ATCC 35937]
gi|325534853|gb|EGD06778.1| single-strand binding protein [Xanthomonas vesicatoria ATCC 35937]
Length = 180
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|255320294|ref|ZP_05361479.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
SK82]
gi|421856229|ref|ZP_16288597.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255302733|gb|EET81965.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
SK82]
gi|403188333|dbj|GAB74798.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 194
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI---------AIR 190
R+ V RLG + ++L GS +Y+EG+L + + D G R EI + R
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEIRGEQMQMLDSGR 112
Query: 191 RNGRLVFLGKGGD 203
+ G G GGD
Sbjct: 113 QQGDQAGAGFGGD 125
>gi|261819945|ref|YP_003258051.1| single-stranded DNA-binding protein [Pectobacterium wasabiae
WPP163]
gi|261603958|gb|ACX86444.1| single-strand binding protein [Pectobacterium wasabiae WPP163]
Length = 182
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K L+G +GQ P + + +G VT ++ T +++ E + TE WH
Sbjct: 5 GVNKVTLIGFLGQDPEVRYMPNGNAVTGITMATSETWRDKQTGEEKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + LG
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLQTRKWQDS-AGVDRWTTEIVVSQRGTMQMLG 114
>gi|425067265|ref|ZP_18470381.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
gi|404601096|gb|EKB01509.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
Length = 179
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 10/129 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGHLGQDPEIRYMPSGGAVANLTLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +++EG L+ + + D +G R E+ + G + LG
Sbjct: 57 RVCIFG-KLAEIAGEYLRKGSQVFIEGQLQTRKWTDQ-SGQDRYTTEVVVNIGGTMQMLG 114
Query: 200 KGGDAQPPS 208
G Q S
Sbjct: 115 GNGGNQAGS 123
>gi|262370908|ref|ZP_06064232.1| single-stranded DNA-binding protein [Acinetobacter johnsonii SH046]
gi|262314270|gb|EEY95313.1| single-stranded DNA-binding protein [Acinetobacter johnsonii SH046]
Length = 194
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI---------AIR 190
R+ V RLG + ++L GS +Y+EG+L + + D G R EI R
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEIRGEQMQMLDNNR 112
Query: 191 RNGRLVFLGKGGDAQP 206
+ G + G G AQP
Sbjct: 113 QQGEQMQGGNDGYAQP 128
>gi|213967429|ref|ZP_03395577.1| single-strand DNA-binding protein [Pseudomonas syringae pv. tomato
T1]
gi|301382128|ref|ZP_07230546.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato Max13]
gi|302058968|ref|ZP_07250509.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato K40]
gi|213927730|gb|EEB61277.1| single-strand DNA-binding protein [Pseudomonas syringae pv. tomato
T1]
Length = 163
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 3 GVNKVILVGTCGQDPDVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 55 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLLG 111
>gi|417149103|ref|ZP_11989194.1| single-stranded DNA-binding protein [Escherichia coli 1.2264]
gi|386161324|gb|EIH23127.1| single-stranded DNA-binding protein [Escherichia coli 1.2264]
Length = 186
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GVNKVILIGHLGQDPEIRYFPNGGGAVANLTLATTDTWRDKQSGEMKEHTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV +Y +L +V ++L GS +Y+EG L + + D G+ R E+ + NG L L
Sbjct: 57 HRVVIYG-KLAEIVGEYLRKGSQVYIEGQLRTRKWFDQQNGVDRYSTEVVVSVNGTLQML 115
Query: 199 G----------------KGGDAQPPSPSE 211
G +GG QPP ++
Sbjct: 116 GSPRQQQGGGNVSSAPAQGGWGQPPQNAQ 144
>gi|380511400|ref|ZP_09854807.1| single-stranded DNA-binding protein [Xanthomonas sacchari NCPPB
4393]
Length = 174
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + E +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRISLATTSVRKDRDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG++
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSI 82
>gi|402844118|ref|ZP_10892495.1| single-stranded DNA-binding protein [Klebsiella sp. OBRC7]
gi|402275697|gb|EJU24837.1| single-stranded DNA-binding protein [Klebsiella sp. OBRC7]
Length = 182
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVILVGHLGQDPDVRYIPNGSAVANLTLATSETWRDKQSGELRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G R + E+ + +NG + LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDE-AGTTRYVTEVLVGQNGTMQMLG 114
>gi|163867787|ref|YP_001608991.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161017438|emb|CAK00996.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 152
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P K + SG + F L T ++ + TE WH V
Sbjct: 9 KVILIGYLGADPESKTMNSGAEIVNFRLATSESYTDKNTHQKVEKTE--------WHSVV 60
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLGKG 201
V+ L + +++L GS +YVEG L+ + + D R EI + + G L L
Sbjct: 61 VFNPYLAKIALQYLSKGSKVYVEGKLQTRKWQDK-NDHDRYTTEIVLSQYKGELHLLDAK 119
Query: 202 GDAQPPSP 209
+ PSP
Sbjct: 120 KEQSTPSP 127
>gi|94676852|ref|YP_588579.1| single-strand binding protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94220002|gb|ABF14161.1| single-strand binding protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 165
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEIRYMPNGCAVANINLATSESWRDKQTGDTKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D G R EI + NG + LG
Sbjct: 57 RVVLFG-KLAEVTGEYLRKGSQVYIEGSLQTRKWQDQ-NGQDRYTTEIIVNANGSMQMLG 114
>gi|421466523|ref|ZP_15915202.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
WC-A-157]
gi|400203303|gb|EJO34296.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
WC-A-157]
Length = 194
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI---------AIR 190
R+ V RLG + ++L GS +Y+EG+L + + D G R EI + R
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEIRGEQMQMLDSGR 112
Query: 191 RNGRLVFLGKGGD 203
+ G G GGD
Sbjct: 113 QQGDQAGAGFGGD 125
>gi|339061946|ref|ZP_08649115.1| Single-stranded DNA-binding protein [gamma proteobacterium
IMCC2047]
gi|330720028|gb|EGG98463.1| Single-stranded DNA-binding protein [gamma proteobacterium
IMCC2047]
Length = 170
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG VT +L T R ++ + + TE WH
Sbjct: 5 GVNKVILVGNLGQDPETRYLPSGGAVTNVTLATSETRKDKSSGQQQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN 174
RV V+ RLG + ++L GS +YVEG+L + +
Sbjct: 57 RV-VFFNRLGEIAGEYLRKGSKVYVEGSLRTRKWQ 90
>gi|315497353|ref|YP_004086157.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
gi|315415365|gb|ADU12006.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
Length = 160
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + SG + ++ T ++ + + TE WHR
Sbjct: 5 VNKVIIIGHLGKDPEIRTTNSGDRIANMTVATSETWRDKLSGDRKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ + L + ++L GS +Y+EG+L + + D G+ + EI ++R NG L LG
Sbjct: 57 VVIFNDALAKIAEEYLRKGSQVYLEGSLATRKWTDQ-QGVEKYTTEIVLQRFNGTLTLLG 115
Query: 200 KGGDAQPPSPSE 211
G+ + P ++
Sbjct: 116 GRGEGKGPPAAQ 127
>gi|124506097|ref|XP_001351646.1| single-strand binding protein, putative [Plasmodium falciparum 3D7]
gi|23504574|emb|CAD51453.1| single-strand binding protein, putative [Plasmodium falciparum 3D7]
Length = 284
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G+VG P K L G V FSL T +R E ++ T+ WHR+
Sbjct: 84 KIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRIV 135
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRN-GRLVFL 198
VY + + ++ K+L G +YV+G+L +K + + ++I EI + N G L+FL
Sbjct: 136 VYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIILSYNKGDLIFL 193
>gi|28867884|ref|NP_790503.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213969244|ref|ZP_03397382.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato T1]
gi|301381751|ref|ZP_07230169.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato Max13]
gi|302061049|ref|ZP_07252590.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato K40]
gi|302189308|ref|ZP_07265981.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae 642]
gi|422591734|ref|ZP_16666372.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422653841|ref|ZP_16716598.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|422659573|ref|ZP_16721997.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|440723613|ref|ZP_20903975.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34876]
gi|440726933|ref|ZP_20907176.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34881]
gi|37999394|sp|Q889U1.1|SSB_PSESM RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|28851120|gb|AAO54198.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213925922|gb|EEB59479.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato T1]
gi|330879412|gb|EGH13561.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330966881|gb|EGH67141.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331018190|gb|EGH98246.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|440359390|gb|ELP96702.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34876]
gi|440364983|gb|ELQ02099.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34881]
Length = 189
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|21232166|ref|NP_638083.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767705|ref|YP_242467.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990822|ref|YP_001902832.1| ssDNA-binding protein [Xanthomonas campestris pv. campestris str.
B100]
gi|37999444|sp|Q8P778.1|SSB_XANCP RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21113919|gb|AAM42007.1| single-stranded DNA binding protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573037|gb|AAY48447.1| single-stranded DNA binding protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732582|emb|CAP50776.1| Single-stranded DNA binding protein [Xanthomonas campestris pv.
campestris]
Length = 172
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|289667161|ref|ZP_06488236.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 181
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|289664595|ref|ZP_06486176.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 181
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|269468857|gb|EEZ80455.1| single-stranded DNA-binding protein [uncultured SUP05 cluster
bacterium]
Length = 93
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K ILVG++GQ P K GR + S+ T ++ E + TE W
Sbjct: 2 AGVNKVILVGRLGQDPDVKYTADGRAIANISIATSDTWKDKNTGEKQERTE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
HRV V+ +L +V ++L GS +YVEG L+ + + D
Sbjct: 54 HRV-VFFGKLAEIVAEYLKKGSQVYVEGKLQTRKWQDK 90
>gi|148653789|ref|YP_001280882.1| single-strand binding protein [Psychrobacter sp. PRwf-1]
gi|148572873|gb|ABQ94932.1| single-strand binding protein [Psychrobacter sp. PRwf-1]
Length = 230
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P ++ +G +VT S+ T +++ E R A +WH
Sbjct: 3 GVNKVIIIGNLGNDPETRQFSNGGSVTNISVATSEQWTDKQTGEK--------REATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV+++ RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RVTLF-NRLGEIAAQYLRKGSKVYIEGSLRTRKWQD 89
>gi|410691812|ref|YP_006970928.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|410691941|ref|YP_006971056.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|301130358|gb|ADK62159.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|301130486|gb|ADK62286.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
Length = 287
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 82 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 133
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 134 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 190
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 191 RVAGAQTQPEEGQQFSG 207
>gi|423123270|ref|ZP_17110953.1| single-strand binding protein [Klebsiella oxytoca 10-5246]
gi|376391097|gb|EHT03778.1| single-strand binding protein [Klebsiella oxytoca 10-5246]
Length = 180
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G R + E+ + +NG + LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGATRYVTEVLVGQNGTMQMLG 114
>gi|134903|sp|P28043.2|SSB2_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
Length = 179
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGKMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|406040952|ref|ZP_11048307.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 187
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ V RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|422604426|ref|ZP_16676443.1| single-stranded DNA-binding protein [Pseudomonas syringae pv. mori
str. 301020]
gi|330888085|gb|EGH20746.1| single-stranded DNA-binding protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 187
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|387604960|ref|YP_006099229.1| single-stranded DNA-binding protein [Escherichia coli 042]
gi|284924674|emb|CBG27865.1| single-stranded DNA-binding protein [Escherichia coli 042]
Length = 175
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEIRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RAAGTQTQPEEAQQFSG 130
>gi|227555|prf||1706408C ssDNA binding protein
Length = 178
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ + TE WH
Sbjct: 4 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGKMREQTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 56 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 112
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 113 RAAGAQ 118
>gi|384418502|ref|YP_005627862.1| single-stranded DNA binding protein [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353461416|gb|AEQ95695.1| single-stranded DNA binding protein [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 183
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|188574258|ref|YP_001919398.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 53638]
gi|410469286|ref|YP_006902955.1| single stranded DNA-binding protein [Escherichia coli]
gi|415799012|ref|ZP_11498625.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E128010]
gi|450202259|ref|ZP_21893391.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|188501433|gb|ACD54567.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 53638]
gi|323161451|gb|EFZ47353.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E128010]
gi|371781269|emb|CCA64292.1| single stranded DNA-binding protein [Escherichia coli]
gi|449312476|gb|EMD02736.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 175
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RAAGTQTQPEEAQQFSG 130
>gi|71735403|ref|YP_276653.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483216|ref|ZP_05637257.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|289625667|ref|ZP_06458621.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289648911|ref|ZP_06480254.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|416018884|ref|ZP_11565797.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|416021775|ref|ZP_11567066.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422584588|ref|ZP_16659693.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|422597967|ref|ZP_16672234.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422640774|ref|ZP_16704200.1| single-stranded DNA-binding protein [Pseudomonas syringae Cit 7]
gi|422683108|ref|ZP_16741370.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|440742713|ref|ZP_20922036.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
gi|71555956|gb|AAZ35167.1| single-strand binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298156377|gb|EFH97475.1| Single-stranded DNA-binding protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322291|gb|EFW78385.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331949|gb|EFW87885.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330869400|gb|EGH04109.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330953164|gb|EGH53424.1| single-stranded DNA-binding protein [Pseudomonas syringae Cit 7]
gi|330988251|gb|EGH86354.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331012444|gb|EGH92500.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|440377017|gb|ELQ13674.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
Length = 187
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|386783246|pdb|3ULP|A Chain A, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783247|pdb|3ULP|B Chain B, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783248|pdb|3ULP|C Chain C, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783249|pdb|3ULP|D Chain D, Plasmodium Falciparum Ssb Complex With Ssdna
Length = 124
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G+VG P K L G V FSL T +R E ++ T+ WHR+
Sbjct: 8 KIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTD--------WHRIV 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLE-QKVFNDPITGLVRRIREIAIRRN-GRLVFL 198
VY + + ++ K+L G +YV+G+L +K + + ++I EI + N G L+FL
Sbjct: 60 VYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIILSYNKGDLIFL 117
>gi|333898870|ref|YP_004472743.1| single-strand binding protein [Pseudomonas fulva 12-X]
gi|333114135|gb|AEF20649.1| single-strand binding protein [Pseudomonas fulva 12-X]
Length = 164
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L SG VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQRVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|422619336|ref|ZP_16688027.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|422661334|ref|ZP_16723688.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|424069637|ref|ZP_17807083.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|443642053|ref|ZP_21125903.1| Single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B64]
gi|330899707|gb|EGH31126.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|330982565|gb|EGH80668.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|407994309|gb|EKG34894.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|443282070|gb|ELS41075.1| Single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B64]
Length = 188
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|422369667|ref|ZP_16450065.1| single-strand binding family protein, partial [Escherichia coli MS
16-3]
gi|315298589|gb|EFU57844.1| single-strand binding family protein [Escherichia coli MS 16-3]
Length = 170
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 127 RAAGAQ 132
>gi|28199482|ref|NP_779796.1| single-stranded DNA-binding protein [Xylella fastidiosa Temecula1]
gi|182682214|ref|YP_001830374.1| single-stranded DNA-binding protein [Xylella fastidiosa M23]
gi|386083538|ref|YP_005999820.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558216|ref|ZP_12209204.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
gi|28057597|gb|AAO29445.1| single-stranded DNA binding protein [Xylella fastidiosa Temecula1]
gi|182632324|gb|ACB93100.1| single-strand binding protein [Xylella fastidiosa M23]
gi|307578485|gb|ADN62454.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338179291|gb|EGO82249.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
Length = 148
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREIAIRRNGRLVF 197
RV + +LG + ++L GS Y+EG + F ND G R + EI + L
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGND---GQDRYVTEIIADQMHMLGG 110
Query: 198 LGKGGDAQPPS--PSEVR 213
G+G P P++VR
Sbjct: 111 RGEGSSGITPQRRPAKVR 128
>gi|404251840|ref|ZP_10955808.1| single-strand binding protein [Sphingomonas sp. PAMC 26621]
Length = 188
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I+VG +G+ P K ++G V + T ++ E + TE WH V+
Sbjct: 7 KVIIVGNLGRDPESKSFQNGGKVVNLRIATSESWKDKNSGERKEQTE--------WHSVA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E LGGV ++L GS +Y+EG L+ + + D G R EI ++ NG L L
Sbjct: 59 IFNEALGGVAERYLRKGSKVYIEGALKTRKWQDA-QGQDRYSTEIVLQGFNGVLTML 114
>gi|418020609|ref|ZP_12659852.1| single stranded DNA-binding protein (ssb) [Candidatus Regiella
insecticola R5.15]
gi|347604050|gb|EGY28773.1| single stranded DNA-binding protein (ssb) [Candidatus Regiella
insecticola R5.15]
Length = 177
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV +Y +L V ++L GS +Y+EG L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVLYG-KLAEVAGEYLRKGSQVYIEGTLQTRKWQDQ-SGQDRYTTEVVVNVGGIMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|293420953|ref|ZP_06661387.1| single-stranded DNA-binding protein [Escherichia coli B088]
gi|291324823|gb|EFE64239.1| single-stranded DNA-binding protein [Escherichia coli B088]
Length = 177
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RAEGAQTQPEEGQQFSG 130
>gi|414173653|ref|ZP_11428280.1| single-stranded DNA-binding protein [Afipia broomeae ATCC 49717]
gi|410890287|gb|EKS38086.1| single-stranded DNA-binding protein [Afipia broomeae ATCC 49717]
Length = 161
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLSIATSDTWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLCKIAEQYLKKGSKVYIEGQLQTRKWQD 91
>gi|85060106|ref|YP_455808.1| single-stranded DNA-binding protein [Sodalis glossinidius str.
'morsitans']
gi|84780626|dbj|BAE75403.1| single-strand binding protein [Sodalis glossinidius str.
'morsitans']
Length = 175
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRHMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGAA 121
>gi|395765180|ref|ZP_10445796.1| single-strand binding protein [Bartonella sp. DB5-6]
gi|395413033|gb|EJF79512.1| single-strand binding protein [Bartonella sp. DB5-6]
Length = 146
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G +P +K + SG V F + T ++ + + TE WH +
Sbjct: 4 KVILIGHLGTNPERKTMTSGGEVVNFRMATTESYTDKATNKKVDKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G+ R + E+ + + G L L GK
Sbjct: 56 VFNPHLAKIALQYLNKGSKVYIEGRLQTRKWQDK-NGVERYVTEVILPQYKGELKLLDGK 114
Query: 201 GGDAQPPS 208
D Q S
Sbjct: 115 NNDNQEQS 122
>gi|237797464|ref|ZP_04585925.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020314|gb|EGI00371.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 188
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|432404727|ref|ZP_19647459.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE26]
gi|430921014|gb|ELC41873.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE26]
Length = 179
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|416156198|ref|ZP_11604330.1| single-strand binding protein [Moraxella catarrhalis 101P30B1]
gi|416216445|ref|ZP_11623769.1| single-strand binding protein [Moraxella catarrhalis 7169]
gi|416220862|ref|ZP_11625671.1| single-strand binding protein [Moraxella catarrhalis 103P14B1]
gi|416228924|ref|ZP_11627856.1| single-strand binding protein [Moraxella catarrhalis 46P47B1]
gi|416236165|ref|ZP_11630531.1| single-strand binding protein [Moraxella catarrhalis 12P80B1]
gi|416237787|ref|ZP_11631142.1| single-strand binding protein [Moraxella catarrhalis BC1]
gi|416245760|ref|ZP_11634655.1| single-strand binding protein [Moraxella catarrhalis BC8]
gi|416253264|ref|ZP_11638287.1| single-strand binding protein [Moraxella catarrhalis O35E]
gi|421779212|ref|ZP_16215706.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
gi|326561905|gb|EGE12240.1| single-strand binding protein [Moraxella catarrhalis 7169]
gi|326563339|gb|EGE13606.1| single-strand binding protein [Moraxella catarrhalis 46P47B1]
gi|326563451|gb|EGE13716.1| single-strand binding protein [Moraxella catarrhalis 12P80B1]
gi|326565992|gb|EGE16153.1| single-strand binding protein [Moraxella catarrhalis 103P14B1]
gi|326568875|gb|EGE18944.1| single-strand binding protein [Moraxella catarrhalis BC1]
gi|326571847|gb|EGE21852.1| single-strand binding protein [Moraxella catarrhalis BC8]
gi|326575360|gb|EGE25285.1| single-strand binding protein [Moraxella catarrhalis 101P30B1]
gi|326578025|gb|EGE27889.1| single-strand binding protein [Moraxella catarrhalis O35E]
gi|407813653|gb|EKF84433.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
Length = 236
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + +G + S+ T +R E + TE WHR
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERKEHTE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL V ++L GS IYVEG+L + + D TG R EI
Sbjct: 55 V-VFNNRLAEVASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI 100
>gi|253991380|ref|YP_003042736.1| single-stranded dna-binding protein [Photorhabdus asymbiotica]
gi|253782830|emb|CAQ85995.1| single-stranded dna-binding protein [Photorhabdus asymbiotica]
Length = 177
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-NGQDRYTTEVVVNMGGTMQMLG 114
>gi|71727757|gb|EAO30024.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
gi|71728151|gb|EAO30345.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 148
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREIAIRRNGRLVF 197
RV + +LG + ++L GS Y+EG + F ND G R + EI + L
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGND---GQDRYVTEIIANQMHMLGG 110
Query: 198 LGKGGDAQPPS--PSEVR 213
G+G P P++VR
Sbjct: 111 RGEGSSGITPQQRPAKVR 128
>gi|209884678|ref|YP_002288535.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|337741665|ref|YP_004633393.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
gi|386030681|ref|YP_005951456.1| ssDNA-binding protein [Oligotropha carboxidovorans OM4]
gi|209872874|gb|ACI92670.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|336095749|gb|AEI03575.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM4]
gi|336099329|gb|AEI07152.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
Length = 161
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 INKVILVGNLGADPDIRRTQDGRAIANMSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
V ++ E L V ++L G+ +YVEG L+ + + D
Sbjct: 57 VVIFNEGLAKVAEQYLRKGAKVYVEGALQTRKWQDK 92
>gi|451942339|ref|YP_007462976.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901726|gb|AGF76188.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 150
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G +P K + SG + F + T +++ + TE WH
Sbjct: 4 KVTLIGRLGANPESKTMTSGAEIVNFRMATSESYTDKKTNQKVEKTE--------WHSAV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G R EI + G L L K
Sbjct: 56 VFNPHLAKIALQYLNKGSKVYIEGKLQTRKWKDK-NGYDRYSTEIVLPHFKGELYLLDAK 114
Query: 201 GGDAQPPSPSEVRGAGY 217
+ P+PS + Y
Sbjct: 115 KEQSASPTPSSITAQSY 131
>gi|395787249|ref|ZP_10466850.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
gi|395411673|gb|EJF78194.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
Length = 150
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G +P K + SG V F + T +++ + TE WH +
Sbjct: 4 KVTLIGRLGANPESKTMPSGGEVVNFRMATSESYTDKKTNQKVEKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL-GKG 201
V+ L + +++L GS +YVEG L+ + + D G + + G L L K
Sbjct: 56 VFNPNLAKIALQYLSKGSKVYVEGKLQTRKWKDKNGGEHLATEIVLPQFKGELYLLDAKK 115
Query: 202 GDAQPPSPSEVRGAGY 217
+ PP+PS + Y
Sbjct: 116 EQSAPPTPSPITSQSY 131
>gi|410085169|ref|ZP_11281889.1| Single-stranded DNA-binding protein [Morganella morganii SC01]
gi|409768378|gb|EKN52440.1| Single-stranded DNA-binding protein [Morganella morganii SC01]
Length = 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G VT +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG+L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVIFG-KLAEIAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQERYTTEVVVNIGGSMQMLG 114
Query: 200 ---KGGD 203
GGD
Sbjct: 115 GRSGGGD 121
>gi|403051081|ref|ZP_10905565.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter bereziniae LMG 1003]
gi|445419723|ref|ZP_21435367.1| single-stranded DNA-binding protein [Acinetobacter sp. WC-743]
gi|444759539|gb|ELW84006.1| single-stranded DNA-binding protein [Acinetobacter sp. WC-743]
Length = 194
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + ++L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|433051032|ref|ZP_20238310.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE120]
gi|431558624|gb|ELI32235.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE120]
Length = 179
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|408823277|ref|ZP_11208167.1| single-stranded DNA-binding protein [Pseudomonas geniculata N1]
Length = 191
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQSGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|71274903|ref|ZP_00651191.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|170729834|ref|YP_001775267.1| single-stranded DNA-binding protein [Xylella fastidiosa M12]
gi|71164635|gb|EAO14349.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71731377|gb|EAO33440.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
gi|167964627|gb|ACA11637.1| single-stranded DNA binding protein [Xylella fastidiosa M12]
Length = 172
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 28 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSGRKDREGNTQER---------TEWH 78
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV + +LG + ++L GS Y+EG + F G R + EI + L G
Sbjct: 79 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGQ-DGQERYVTEIIADQMHMLGGRG 136
Query: 200 KGGDAQPP--SPSEVR 213
+G P P++VR
Sbjct: 137 EGSSGITPQRQPAKVR 152
>gi|416872470|ref|ZP_11916708.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 152504]
gi|334845999|gb|EGM24557.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 152504]
Length = 165
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + G+ VT SL T +++ + + TE WH
Sbjct: 4 GVNKVILVGHLGQDPDARSTPGGKAVTSLSLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ RL + ++L GS +Y+EG+L + + G E+ + NG + LG
Sbjct: 56 RVVLFG-RLAEIAAQYLRKGSQVYIEGSLRTRKWQGQ-DGQDHYSTEVVVDINGNMQLLG 113
>gi|425748098|ref|ZP_18866086.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-348]
gi|425491644|gb|EKU57924.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-348]
Length = 193
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T + ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEISQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|443644296|ref|ZP_21128146.1| Putative prophage PSSB64-02, single-stranded DNA-binding protein
[Pseudomonas syringae pv. syringae B64]
gi|443284313|gb|ELS43318.1| Putative prophage PSSB64-02, single-stranded DNA-binding protein
[Pseudomonas syringae pv. syringae B64]
Length = 164
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPDVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLLG 112
>gi|15599428|ref|NP_252922.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO1]
gi|116052269|ref|YP_788887.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152984573|ref|YP_001346254.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PA7]
gi|218889439|ref|YP_002438303.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa LESB58]
gi|254237097|ref|ZP_04930420.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa C3719]
gi|254242904|ref|ZP_04936226.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 2192]
gi|355652583|ref|ZP_09056843.1| single-stranded DNA-binding protein [Pseudomonas sp. 2_1_26]
gi|386056767|ref|YP_005973289.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa M18]
gi|418588013|ref|ZP_13152031.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P1]
gi|418589213|ref|ZP_13153141.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P2]
gi|419756671|ref|ZP_14283016.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137309|ref|ZP_14645299.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CIG1]
gi|421151790|ref|ZP_15611392.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
14886]
gi|421157777|ref|ZP_15617122.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
25324]
gi|421165643|ref|ZP_15623963.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
700888]
gi|421172483|ref|ZP_15630253.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CI27]
gi|421178616|ref|ZP_15636226.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|421518782|ref|ZP_15965456.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO579]
gi|451982913|ref|ZP_21931211.1| Single-stranded DNA-binding protein [Pseudomonas aeruginosa 18A]
gi|730833|sp|P40947.3|SSB_PSEAE RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|9950448|gb|AAG07620.1|AE004840_6 single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO1]
gi|483597|emb|CAA83688.1| single-stranded DNA binding protein [Pseudomonas aeruginosa]
gi|115587490|gb|ABJ13505.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169028|gb|EAZ54539.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa C3719]
gi|126196282|gb|EAZ60345.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 2192]
gi|150959731|gb|ABR81756.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PA7]
gi|218769662|emb|CAW25422.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa LESB58]
gi|347303073|gb|AEO73187.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa M18]
gi|354823921|gb|EHF08184.1| single-stranded DNA-binding protein [Pseudomonas sp. 2_1_26]
gi|375041252|gb|EHS33962.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P1]
gi|375051975|gb|EHS44436.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P2]
gi|384396426|gb|EIE42844.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PADK2_CF510]
gi|403249955|gb|EJY63421.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CIG1]
gi|404348264|gb|EJZ74613.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO579]
gi|404526662|gb|EKA36864.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
14886]
gi|404537749|gb|EKA47332.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CI27]
gi|404541096|gb|EKA50469.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
700888]
gi|404548220|gb|EKA57184.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|404550302|gb|EKA59063.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
25324]
gi|451759382|emb|CCQ83734.1| Single-stranded DNA-binding protein [Pseudomonas aeruginosa 18A]
gi|453042411|gb|EME90155.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PA21_ST175]
Length = 165
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + + +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ RL + ++L GS +YVEG+L + + G R EI + NG + LG
Sbjct: 56 RV-VFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGNMQLLG 113
Query: 200 K--GGDAQPPSPSE 211
GD +P E
Sbjct: 114 GRPSGDDSQRAPRE 127
>gi|338974410|ref|ZP_08629771.1| single-stranded DNA-binding protein [Bradyrhizobiaceae bacterium
SG-6C]
gi|414166750|ref|ZP_11422982.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
gi|338232497|gb|EGP07626.1| single-stranded DNA-binding protein [Bradyrhizobiaceae bacterium
SG-6C]
gi|410892594|gb|EKS40386.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
Length = 161
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + S+ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLSVATSETWRDRNTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLCKIAEQYLKKGSKVYLEGQLQTRKWQD 91
>gi|421778837|ref|ZP_16215384.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AD30]
gi|408456089|gb|EKJ79933.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AD30]
Length = 177
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RAAGTQTQPEEAQQFSG 130
>gi|417120803|ref|ZP_11970264.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0246]
gi|386148940|gb|EIG95374.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0246]
Length = 177
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K +LVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|296112397|ref|YP_003626335.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
gi|295920091|gb|ADG60442.1| single-stranded DNA-binding protein [Moraxella catarrhalis BBH18]
Length = 236
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + +G + S+ T +R E + TE WHR
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERKEHTE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
V V+ RL + ++L GS IYVEG+L + + D TG R EI R + LG
Sbjct: 55 V-VFNNRLAEIASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI---RADNMQMLGN 110
>gi|384428722|ref|YP_005638082.1| single-strand binding protein [Xanthomonas campestris pv. raphani
756C]
gi|341937825|gb|AEL07964.1| single-strand binding protein [Xanthomonas campestris pv. raphani
756C]
Length = 173
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|331643217|ref|ZP_08344349.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H736]
gi|331037444|gb|EGI09667.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H736]
Length = 192
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 127 RAAGAQ 132
>gi|395788518|ref|ZP_10468080.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
gi|395408158|gb|EJF74777.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
Length = 146
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G P K + SG V F + T ++ + + TE WH +
Sbjct: 4 KVMLIGYLGADPECKTMNSGTEVVNFRIATSESYTDKATNKKIDKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G+ R + E+ + + G L L GK
Sbjct: 56 VFNPHLAKIALQYLHKGSKVYIEGQLQTRKWQDK-NGIDRYVTEVILPKYKGELKLLDGK 114
Query: 201 GGDAQPPS 208
D Q S
Sbjct: 115 NDDDQKQS 122
>gi|451940993|ref|YP_007461631.1| single-strand binding protein [Bartonella australis Aust/NH1]
gi|451900380|gb|AGF74843.1| single-strand binding protein [Bartonella australis Aust/NH1]
Length = 152
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
+ G+ K IL+G +G P L SG V +L T + +R+ E R V
Sbjct: 1 MASGVNKVILLGNLGADPKISSLNSGDRVANLTLATSEVWKDRKTGEK--------RERV 52
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+WH V ++ ERL + +L G+ IYVEG L+ + + D
Sbjct: 53 EWHNVVIFDERLVKLAEHYLKKGNKIYVEGQLQTRKWQD 91
>gi|425281120|ref|ZP_18672274.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
gi|408194619|gb|EKI20087.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
Length = 175
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ Q
Sbjct: 114 RAAGTQ 119
>gi|421494440|ref|ZP_15941788.1| SSB [Morganella morganii subsp. morganii KT]
gi|455737896|ref|YP_007504162.1| Single-stranded DNA-binding protein [Morganella morganii subsp.
morganii KT]
gi|400191302|gb|EJO24450.1| SSB [Morganella morganii subsp. morganii KT]
gi|455419459|gb|AGG29789.1| Single-stranded DNA-binding protein [Morganella morganii subsp.
morganii KT]
Length = 173
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G VT +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG+L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVIFG-KLAEIAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQERYTTEVVVNIGGSMQMLG 114
Query: 200 ---KGGD 203
GGD
Sbjct: 115 GRSGGGD 121
>gi|317494282|ref|ZP_07952697.1| single-strand binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|365838513|ref|ZP_09379851.1| single-strand binding family protein [Hafnia alvei ATCC 51873]
gi|316917737|gb|EFV39081.1| single-strand binding protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|364559306|gb|EHM37289.1| single-strand binding family protein [Hafnia alvei ATCC 51873]
Length = 179
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSETWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + EI + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEIVVNVGGTMQMLG 114
>gi|423715399|ref|ZP_17689623.1| single-strand binding protein, partial [Bartonella elizabethae
F9251]
gi|395429526|gb|EJF95587.1| single-strand binding protein, partial [Bartonella elizabethae
F9251]
Length = 148
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G +P K + SG V F + T ++ + + TE WH +
Sbjct: 7 KVMLIGHLGANPESKTMPSGGEVVNFRMATSESYTDKATNKRIDKTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G+ R EI + + G L L K
Sbjct: 59 VFNPHLAKIALQYLNKGSKVYIEGQLQTRKWQDK-NGIDRYTTEIILPKYKGELKLLDNK 117
Query: 201 GGDAQPPSPS 210
D Q PS +
Sbjct: 118 NNDDQEPSSA 127
>gi|227554|prf||1706408B ssDNA binding protein
Length = 174
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 4 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 56 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 112
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 113 RAAGTQTQPEEAQQFSG 129
>gi|421178639|ref|ZP_15636247.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|404548107|gb|EKA57076.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
Length = 157
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + + +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ RL + ++L GS +YVEG+L + + G R EI + NG + LG
Sbjct: 56 RV-VFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGNMQLLG 113
Query: 200 K--GGDAQPPSPSE 211
GD +P E
Sbjct: 114 GRPSGDDSQRAPRE 127
>gi|417153627|ref|ZP_11992246.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0497]
gi|417584246|ref|ZP_12235038.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_B2F1]
gi|345330814|gb|EGW63278.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_B2F1]
gi|386169147|gb|EIH35657.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0497]
Length = 177
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLCKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|134904|sp|P28044.2|SSB7_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
Length = 175
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RAAGTQTQPEEAQQFSG 130
>gi|409427735|ref|ZP_11262228.1| protein Ssb [Pseudomonas sp. HYS]
Length = 170
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLLG 112
>gi|289675520|ref|ZP_06496410.1| single-stranded DNA-binding protein, partial [Pseudomonas syringae
pv. syringae FF5]
Length = 146
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|260575189|ref|ZP_05843189.1| single-strand binding protein [Rhodobacter sp. SW2]
gi|259022449|gb|EEW25745.1| single-strand binding protein [Rhodobacter sp. SW2]
Length = 174
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V ++ T ++ E + TE WHR
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLNIATSETWRDKASGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
VS+ E L + ++L GST+Y+EG LE + + D +G R EI +R G L L
Sbjct: 57 VSILNEPLAKIAEQYLKKGSTVYIEGQLETRKWQDQ-SGAERYTTEIVLRPYRGELTLL 114
>gi|229512671|ref|ZP_04402140.1| single-stranded DNA-binding protein [Vibrio cholerae TMA 21]
gi|229525090|ref|ZP_04414495.1| single-stranded DNA-binding protein [Vibrio cholerae bv. albensis
VL426]
gi|229530242|ref|ZP_04419630.1| single-stranded DNA-binding protein [Vibrio cholerae 12129(1)]
gi|297580535|ref|ZP_06942461.1| single strand DNA-binding protein [Vibrio cholerae RC385]
gi|229332015|gb|EEN97503.1| single-stranded DNA-binding protein [Vibrio cholerae 12129(1)]
gi|229338671|gb|EEO03688.1| single-stranded DNA-binding protein [Vibrio cholerae bv. albensis
VL426]
gi|229350348|gb|EEO15299.1| single-stranded DNA-binding protein [Vibrio cholerae TMA 21]
gi|297534951|gb|EFH73786.1| single strand DNA-binding protein [Vibrio cholerae RC385]
Length = 183
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 11 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 62
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 63 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 120
Query: 199 G 199
G
Sbjct: 121 G 121
>gi|416243292|ref|ZP_11633813.1| single-strand binding protein [Moraxella catarrhalis BC7]
gi|416249032|ref|ZP_11636366.1| single-strand binding protein [Moraxella catarrhalis CO72]
gi|326569175|gb|EGE19236.1| single-strand binding protein [Moraxella catarrhalis BC7]
gi|326576554|gb|EGE26462.1| single-strand binding protein [Moraxella catarrhalis CO72]
Length = 236
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + +G + S+ T +R E + TE WHR
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERKEHTE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
V V+ RL + ++L GS IYVEG+L + + D TG R EI R + LG
Sbjct: 55 V-VFNNRLAEIASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI---RADNMQMLGN 110
>gi|422784350|ref|ZP_16837131.1| single-strand binding protein [Escherichia coli TW10509]
gi|423007565|ref|ZP_16998306.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 04-8351]
gi|323974535|gb|EGB69660.1| single-strand binding protein [Escherichia coli TW10509]
gi|354856180|gb|EHF16645.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 04-8351]
Length = 175
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQMLG 113
>gi|110598256|ref|ZP_01386532.1| single-strand binding protein [Chlorobium ferrooxidans DSM 13031]
gi|110340171|gb|EAT58670.1| single-strand binding protein [Chlorobium ferrooxidans DSM 13031]
Length = 185
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 69 FDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPT 128
F+ P N + G+ K +L+G++G+ PV ++ S TV F++ T + + + E
Sbjct: 10 FNEP-RNTMARGLNKVMLIGRLGKDPVSRQAGS-NTVCNFTIATSETFKDAQGSKQER-- 65
Query: 129 EYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+WH ++V+ RLG + ++L G +Y+EG L+ + ++DP +G + +I
Sbjct: 66 -------TEWHNIAVWG-RLGEICQQYLTKGREVYIEGKLQTRSWDDPKSGEKKYATDI 116
>gi|32470104|ref|NP_863047.1| single-stranded DNA-binding protein [Escherichia coli]
gi|58383257|ref|YP_194827.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|170650901|ref|YP_001739944.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli SMS-3-5]
gi|310286500|ref|YP_003937761.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410651668|ref|YP_006954789.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin]
gi|415773145|ref|ZP_11485851.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|415775117|ref|ZP_11487105.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|417210578|ref|ZP_12021153.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli JB1-95]
gi|417250488|ref|ZP_12042270.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0967]
gi|418832021|ref|ZP_13386969.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|419140328|ref|ZP_13685097.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC5E]
gi|419213018|ref|ZP_13756067.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8C]
gi|419342698|ref|ZP_13884143.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|420108004|ref|ZP_14618306.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|425382963|ref|ZP_18766906.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|432915668|ref|ZP_20120898.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE190]
gi|433021740|ref|ZP_20209794.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE105]
gi|450233978|ref|ZP_21898323.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
gi|28629361|gb|AAO49641.1| Ssb [Escherichia coli]
gi|37962736|gb|AAR05683.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|170522177|gb|ACB20354.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli SMS-3-5]
gi|308826829|emb|CBX36102.1| single-stranded DNA-binding protein [Escherichia coli]
gi|315617925|gb|EFU98520.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|315619250|gb|EFU99826.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|327536661|gb|AEA95493.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin]
gi|377976577|gb|EHV39883.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC5E]
gi|378045684|gb|EHW08077.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8C]
gi|378181176|gb|EHX41849.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|386195888|gb|EIH90122.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli JB1-95]
gi|386219390|gb|EII35856.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0967]
gi|392798272|gb|EJA54551.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|394411356|gb|EJE85617.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|408291338|gb|EKJ09971.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|409924829|gb|AFV47303.1| single strand DNA binding protein [uncultured bacterium]
gi|431434692|gb|ELH16338.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE190]
gi|431524874|gb|ELI01697.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE105]
gi|449311546|gb|EMD01903.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
Length = 175
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RAAGTQTQPEEAQQFSG 130
>gi|153802217|ref|ZP_01956803.1| single-strand binding protein [Vibrio cholerae MZO-3]
gi|153825660|ref|ZP_01978327.1| single-strand binding protein [Vibrio cholerae MZO-2]
gi|153829318|ref|ZP_01981985.1| single-strand binding protein [Vibrio cholerae 623-39]
gi|254291302|ref|ZP_04962096.1| single-strand binding protein [Vibrio cholerae AM-19226]
gi|262191515|ref|ZP_06049699.1| single-stranded DNA-binding protein [Vibrio cholerae CT 5369-93]
gi|384423702|ref|YP_005633060.1| ssDNA-binding protein [Vibrio cholerae LMA3984-4]
gi|417819280|ref|ZP_12465897.1| single-stranded DNA-binding protein [Vibrio cholerae HE39]
gi|417823533|ref|ZP_12470125.1| single-stranded DNA-binding protein [Vibrio cholerae HE48]
gi|419828972|ref|ZP_14352461.1| single-stranded DNA-binding family protein [Vibrio cholerae HC-1A2]
gi|419831752|ref|ZP_14355219.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-61A2]
gi|419835343|ref|ZP_14358788.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46B1]
gi|421342177|ref|ZP_15792584.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43B1]
gi|421350256|ref|ZP_15800622.1| single-stranded DNA-binding protein [Vibrio cholerae HE-25]
gi|422916134|ref|ZP_16950475.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02A1]
gi|422921648|ref|ZP_16954859.1| single-stranded DNA-binding protein [Vibrio cholerae BJG-01]
gi|423733704|ref|ZP_17706920.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-41B1]
gi|423816094|ref|ZP_17715080.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-55C2]
gi|423848157|ref|ZP_17718866.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-59A1]
gi|423878735|ref|ZP_17722473.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-60A1]
gi|423946433|ref|ZP_17733341.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-40]
gi|423975591|ref|ZP_17736889.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-46]
gi|423996554|ref|ZP_17739820.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02C1]
gi|424007988|ref|ZP_17750938.1| single-stranded DNA-binding protein [Vibrio cholerae HC-44C1]
gi|424015252|ref|ZP_17755102.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55B2]
gi|424018367|ref|ZP_17758169.1| single-stranded DNA-binding protein [Vibrio cholerae HC-59B1]
gi|424623740|ref|ZP_18062220.1| single-stranded DNA-binding protein [Vibrio cholerae HC-50A1]
gi|424628315|ref|ZP_18066624.1| single-stranded DNA-binding protein [Vibrio cholerae HC-51A1]
gi|424632268|ref|ZP_18070387.1| single-stranded DNA-binding protein [Vibrio cholerae HC-52A1]
gi|424635356|ref|ZP_18073380.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55A1]
gi|424639148|ref|ZP_18077048.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A1]
gi|424647431|ref|ZP_18085111.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A1]
gi|429886285|ref|ZP_19367845.1| Single-stranded DNA-binding protein [Vibrio cholerae PS15]
gi|443526286|ref|ZP_21092372.1| single-stranded DNA-binding protein [Vibrio cholerae HC-78A1]
gi|124122241|gb|EAY40984.1| single-strand binding protein [Vibrio cholerae MZO-3]
gi|148875218|gb|EDL73353.1| single-strand binding protein [Vibrio cholerae 623-39]
gi|149740690|gb|EDM54797.1| single-strand binding protein [Vibrio cholerae MZO-2]
gi|150422758|gb|EDN14711.1| single-strand binding protein [Vibrio cholerae AM-19226]
gi|262032613|gb|EEY51167.1| single-stranded DNA-binding protein [Vibrio cholerae CT 5369-93]
gi|327483255|gb|AEA77662.1| Single-stranded DNA-binding protein [Vibrio cholerae LMA3984-4]
gi|340041136|gb|EGR02103.1| single-stranded DNA-binding protein [Vibrio cholerae HE39]
gi|340048162|gb|EGR09084.1| single-stranded DNA-binding protein [Vibrio cholerae HE48]
gi|341640967|gb|EGS65541.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02A1]
gi|341648363|gb|EGS72426.1| single-stranded DNA-binding protein [Vibrio cholerae BJG-01]
gi|395945680|gb|EJH56345.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43B1]
gi|395954378|gb|EJH64988.1| single-stranded DNA-binding protein [Vibrio cholerae HE-25]
gi|408016310|gb|EKG53860.1| single-stranded DNA-binding protein [Vibrio cholerae HC-50A1]
gi|408021623|gb|EKG58864.1| single-stranded DNA-binding protein [Vibrio cholerae HC-52A1]
gi|408027735|gb|EKG64687.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A1]
gi|408027822|gb|EKG64768.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55A1]
gi|408037226|gb|EKG73625.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A1]
gi|408059296|gb|EKG94063.1| single-stranded DNA-binding protein [Vibrio cholerae HC-51A1]
gi|408622161|gb|EKK95149.1| single-stranded DNA-binding family protein [Vibrio cholerae HC-1A2]
gi|408631861|gb|EKL04377.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-41B1]
gi|408636765|gb|EKL08887.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-55C2]
gi|408644180|gb|EKL15881.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-60A1]
gi|408645283|gb|EKL16939.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-59A1]
gi|408652159|gb|EKL23384.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-61A2]
gi|408662136|gb|EKL33108.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-40]
gi|408666219|gb|EKL37015.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-46]
gi|408854831|gb|EKL94578.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02C1]
gi|408858756|gb|EKL98426.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46B1]
gi|408862154|gb|EKM01696.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55B2]
gi|408866275|gb|EKM05658.1| single-stranded DNA-binding protein [Vibrio cholerae HC-44C1]
gi|408870438|gb|EKM09716.1| single-stranded DNA-binding protein [Vibrio cholerae HC-59B1]
gi|429226802|gb|EKY32874.1| Single-stranded DNA-binding protein [Vibrio cholerae PS15]
gi|443455370|gb|ELT19151.1| single-stranded DNA-binding protein [Vibrio cholerae HC-78A1]
Length = 177
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|56692915|ref|YP_164279.1| single-stranded DNA-binding protein [Pseudomonas phage F116]
gi|48527501|gb|AAT45876.1| single-stranded DNA-binding protein [Pseudomonas phage F116]
Length = 167
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + G+ VT SL T +++ + + TE WH
Sbjct: 4 GVNKVILVGHLGQDPDARSTPGGKAVTSLSLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ RL + ++L GS +Y+EG+L + + G E+ + NG + LG
Sbjct: 56 RVVLFG-RLAEIAAQYLRKGSQVYIEGSLRTRKWQGQ-DGQDHYSTEVVVDINGNMQLLG 113
>gi|160896266|ref|YP_001561848.1| ssDNA-binding protein [Delftia acidovorans SPH-1]
gi|160361850|gb|ABX33463.1| single-strand binding protein [Delftia acidovorans SPH-1]
Length = 188
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|260751871|ref|YP_003237785.1| putative single-strand DNA-binding protein Ssb [Escherichia coli
O111:H- str. 11128]
gi|415817200|ref|ZP_11507443.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli OK1180]
gi|417196792|ref|ZP_12016185.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
gi|419200667|ref|ZP_13743927.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8A]
gi|257767863|dbj|BAI39355.1| putative single-strand DNA-binding protein Ssb [Escherichia coli
O111:H- str. 11128]
gi|323181095|gb|EFZ66630.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli OK1180]
gi|378039066|gb|EHW01570.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8A]
gi|386188982|gb|EIH77766.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
Length = 175
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RAAGTQTQPEEAQQFSG 130
>gi|366160806|ref|ZP_09460668.1| single-stranded DNA-binding protein [Escherichia sp. TW09308]
Length = 179
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K +L+G++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVVLIGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|329850841|ref|ZP_08265686.1| single-stranded DNA-binding protein [Asticcacaulis biprosthecum
C19]
gi|328841156|gb|EGF90727.1| single-stranded DNA-binding protein [Asticcacaulis biprosthecum
C19]
Length = 169
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + L SG V ++ T ++ E + TE WHR
Sbjct: 5 VNKVILIGNLGKDPEIRTLNSGDRVANLTVATSEQWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ + L + ++L GST+Y+EG+L+ + + D +G+ + E+ +++ G L L
Sbjct: 57 VVIFNDNLAKIAEQYLRKGSTVYLEGSLQTRKWTDQ-SGVEKYSTEVVLQKFRGELTLL 114
>gi|153215386|ref|ZP_01949984.1| single-strand binding protein [Vibrio cholerae 1587]
gi|124114757|gb|EAY33577.1| single-strand binding protein [Vibrio cholerae 1587]
Length = 177
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|357416959|ref|YP_004929979.1| single-stranded DNA-binding protein [Pseudoxanthomonas spadix
BD-a59]
gi|355334537|gb|AER55938.1| single-stranded DNA-binding protein [Pseudoxanthomonas spadix
BD-a59]
Length = 178
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G VT SL T +R ++ E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQGGMAVTRISLATTSVRKDK---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|71275344|ref|ZP_00651630.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71163644|gb|EAO13360.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71729210|gb|EAO31330.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 148
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV + +LG + ++L GS Y+EG + F G R + EI + L G
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGQ-DGQERYVTEIIADQMHMLGGRG 112
Query: 200 KGGDAQPPS--PSEVR 213
+G P P++VR
Sbjct: 113 EGSSGITPQRRPAKVR 128
>gi|427426403|ref|ZP_18916461.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-136]
gi|425696864|gb|EKU66562.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-136]
Length = 195
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|261209951|ref|ZP_05924251.1| single-stranded DNA-binding protein [Vibrio sp. RC341]
gi|260841016|gb|EEX67548.1| single-stranded DNA-binding protein [Vibrio sp. RC341]
Length = 177
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|157368561|ref|YP_001476550.1| single-strand binding protein [Serratia proteamaculans 568]
gi|157320325|gb|ABV39422.1| single-strand binding protein [Serratia proteamaculans 568]
Length = 168
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G + +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAIANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG+L+ + + D G+ + EI + G L L
Sbjct: 57 RVVLF-GKLAEIAGEYLRTGSQVYIEGSLQTRKWTDQ-AGVEKYTTEIVVNIGGTLQML- 113
Query: 200 KGGDAQP 206
GG +QP
Sbjct: 114 -GGRSQP 119
>gi|393723018|ref|ZP_10342945.1| single-stranded DNA-binding protein (SSB) [Sphingomonas sp. PAMC
26605]
Length = 185
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I++G +G+ P K ++G V + T ++ E + TE WH V+
Sbjct: 8 KVIIIGNLGRDPESKSFQNGGKVVNLRIATSETWKDKNTGERKEQTE--------WHSVA 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E LGGV ++L GS +Y+EG L+ + + D +G + EI ++ NG L L
Sbjct: 60 IFNEALGGVAERYLRKGSKVYIEGALKTRKWQDA-SGNDKYSTEIVLQGFNGVLTML 115
>gi|448244161|ref|YP_007408214.1| single-stranded DNA-binding protein [Serratia marcescens WW4]
gi|134916|sp|P25762.2|SSB_SERMA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|47270|emb|CAA46208.1| single-stranded DNA-binding protein [Serratia marcescens]
gi|445214525|gb|AGE20195.1| single-stranded DNA-binding protein [Serratia marcescens WW4]
gi|453063450|gb|EMF04429.1| single-stranded DNA-binding protein [Serratia marcescens VGH107]
Length = 176
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R EI + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEIVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|3851548|gb|AAC72352.1| single strand DNA-binding protein [Vibrio cholerae C6706]
Length = 192
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 20 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 71
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 72 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 129
Query: 199 G 199
G
Sbjct: 130 G 130
>gi|378581874|ref|ZP_09830514.1| Single-stranded DNA-binding protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377815189|gb|EHT98304.1| Single-stranded DNA-binding protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 180
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQMLG 114
Query: 200 ---KGGDA 204
+GG+A
Sbjct: 115 GRQQGGNA 122
>gi|359397583|ref|ZP_09190610.1| single-stranded DNA-binding protein [Novosphingobium
pentaromativorans US6-1]
gi|357601092|gb|EHJ62784.1| single-stranded DNA-binding protein [Novosphingobium
pentaromativorans US6-1]
Length = 193
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K ++G + L + T +R E + TE WH
Sbjct: 4 VNKVILVGNLGADPEVKSFQNGGRIALMRIATSESWKDRNTGERQERTE--------WHS 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+SV E L GVV ++L GS IYVEG L + + D
Sbjct: 56 ISVQSEGLVGVVERYLRKGSKIYVEGQLRTRKWQD 90
>gi|226328532|ref|ZP_03804050.1| hypothetical protein PROPEN_02426 [Proteus penneri ATCC 35198]
gi|225203265|gb|EEG85619.1| single-strand binding family protein [Proteus penneri ATCC 35198]
Length = 165
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + L SG V ++ T +++ E E TE WHRV
Sbjct: 8 KVILIGNLGRDPEIRYLPSGGAVANLTVATSEKWRDKQTGETEKKTE--------WHRVV 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
++ +L + +L GS +Y+EG L+ + ++D G+ R E+ ++ G + LG
Sbjct: 60 LFG-KLADIASGYLCKGSQVYIEGQLQTREWDD--NGVKRYTTEVVVKVGGSMQMLG 113
>gi|157418097|ref|YP_001481169.1| single-stranded DNA-binding protein [Escherichia coli APEC O1]
gi|301329996|ref|ZP_07222684.1| single-strand binding family protein [Escherichia coli MS 78-1]
gi|88770147|gb|ABD51584.1| Ssb [Escherichia coli APEC O1]
gi|300843969|gb|EFK71729.1| single-strand binding family protein [Escherichia coli MS 78-1]
Length = 188
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 127 RAAGTQTQPEEAQQFSG 143
>gi|310816479|ref|YP_003964443.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|385234095|ref|YP_005795437.1| ssDNA-binding protein [Ketogulonicigenium vulgare WSH-001]
gi|308755214|gb|ADO43143.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|343463006|gb|AEM41441.1| Single-stranded DNA-binding protein [Ketogulonicigenium vulgare
WSH-001]
Length = 155
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K L+G +G+ P + +G V ++ T ++ E + TE WH+
Sbjct: 5 VNKVFLIGNLGRDPEVRSFPNGGKVVNLNIATSETWRDKNTGERKERTE--------WHK 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFLG 199
V+++ + L V K+L GS +Y+EG LE + + D +G R EIA+R G+L L
Sbjct: 57 VAIFNDGLANVAEKYLRKGSKVYIEGKLETRKWQDQ-SGTDRYTTEIALRPFFGQLTLL- 114
Query: 200 KGGDAQPPSPSEVRGAGY 217
D + + G GY
Sbjct: 115 ---DGRSQDDNRHDGEGY 129
>gi|254561436|ref|YP_003068531.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
DM4]
gi|254268714|emb|CAX24673.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
DM4]
Length = 188
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V +Y + L V ++L GS +Y+EG L+ + + D +G+ + E+ ++R G + L
Sbjct: 57 VVIYNDNLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGVEKYTTEVVLQRFRGEMTIL 114
>gi|422354674|ref|ZP_16435402.1| single-strand binding family protein, partial [Escherichia coli MS
117-3]
gi|324017360|gb|EGB86579.1| single-strand binding family protein [Escherichia coli MS 117-3]
Length = 177
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 114 RAAGTQTQPEEAQQFSG 130
>gi|15640424|ref|NP_230051.1| single-stranded DNA-binding protein [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121587597|ref|ZP_01677362.1| single-strand binding protein [Vibrio cholerae 2740-80]
gi|121727262|ref|ZP_01680421.1| single-strand binding protein [Vibrio cholerae V52]
gi|147673244|ref|YP_001218665.1| single-stranded DNA-binding protein [Vibrio cholerae O395]
gi|153818249|ref|ZP_01970916.1| single-strand binding protein [Vibrio cholerae NCTC 8457]
gi|153822251|ref|ZP_01974918.1| single-strand binding protein [Vibrio cholerae B33]
gi|227080608|ref|YP_002809159.1| single-stranded DNA-binding protein [Vibrio cholerae M66-2]
gi|227116802|ref|YP_002818698.1| single-strand binding protein [Vibrio cholerae O395]
gi|255743783|ref|ZP_05417740.1| single-stranded DNA-binding protein [Vibrio cholera CIRS 101]
gi|262153604|ref|ZP_06028732.1| single-stranded DNA-binding protein [Vibrio cholerae INDRE 91/1]
gi|262167638|ref|ZP_06035342.1| single-stranded DNA-binding protein [Vibrio cholerae RC27]
gi|360037036|ref|YP_004938799.1| single-stranded DNA-binding protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740272|ref|YP_005332241.1| single-stranded DNA-binding protein [Vibrio cholerae IEC224]
gi|417812380|ref|ZP_12459040.1| single-stranded DNA-binding protein [Vibrio cholerae HC-49A2]
gi|417815244|ref|ZP_12461878.1| single-stranded DNA-binding protein [Vibrio cholerae HCUF01]
gi|418331103|ref|ZP_12942053.1| single-stranded DNA-binding protein [Vibrio cholerae HC-06A1]
gi|418336262|ref|ZP_12945161.1| single-stranded DNA-binding protein [Vibrio cholerae HC-23A1]
gi|418342642|ref|ZP_12949443.1| single-stranded DNA-binding protein [Vibrio cholerae HC-28A1]
gi|418347806|ref|ZP_12952542.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43A1]
gi|418354311|ref|ZP_12957035.1| single-stranded DNA-binding protein [Vibrio cholerae HC-61A1]
gi|419824868|ref|ZP_14348375.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1033(6)]
gi|421315772|ref|ZP_15766344.1| single-stranded DNA-binding protein [Vibrio cholerae CP1032(5)]
gi|421319184|ref|ZP_15769743.1| single-stranded DNA-binding protein [Vibrio cholerae CP1038(11)]
gi|421323218|ref|ZP_15773747.1| single-stranded DNA-binding protein [Vibrio cholerae CP1041(14)]
gi|421327625|ref|ZP_15778141.1| single-stranded DNA-binding protein [Vibrio cholerae CP1042(15)]
gi|421330624|ref|ZP_15781106.1| single-stranded DNA-binding protein [Vibrio cholerae CP1046(19)]
gi|421334220|ref|ZP_15784690.1| single-stranded DNA-binding protein [Vibrio cholerae CP1048(21)]
gi|421338120|ref|ZP_15788559.1| single-stranded DNA-binding protein [Vibrio cholerae HC-20A2]
gi|421345722|ref|ZP_15796107.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46A1]
gi|421353205|ref|ZP_15803539.1| single-stranded DNA-binding protein [Vibrio cholerae HE-45]
gi|422305824|ref|ZP_16393011.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1035(8)]
gi|422901236|ref|ZP_16936614.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48A1]
gi|422905420|ref|ZP_16940278.1| single-stranded DNA-binding protein [Vibrio cholerae HC-70A1]
gi|422912140|ref|ZP_16946670.1| single-stranded DNA-binding protein [Vibrio cholerae HFU-02]
gi|422924620|ref|ZP_16957658.1| single-stranded DNA-binding protein [Vibrio cholerae HC-38A1]
gi|423143667|ref|ZP_17131285.1| single-stranded DNA-binding protein [Vibrio cholerae HC-19A1]
gi|423148651|ref|ZP_17136012.1| single-stranded DNA-binding protein [Vibrio cholerae HC-21A1]
gi|423152441|ref|ZP_17139643.1| single-stranded DNA-binding protein [Vibrio cholerae HC-22A1]
gi|423155225|ref|ZP_17142364.1| single-stranded DNA-binding protein [Vibrio cholerae HC-32A1]
gi|423159084|ref|ZP_17146058.1| single-stranded DNA-binding protein [Vibrio cholerae HC-33A2]
gi|423163761|ref|ZP_17150558.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48B2]
gi|423747003|ref|ZP_17711291.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-50A2]
gi|423891613|ref|ZP_17725305.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-62A1]
gi|423926389|ref|ZP_17729922.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-77A1]
gi|424000944|ref|ZP_17744037.1| single-stranded DNA-binding protein [Vibrio cholerae HC-17A2]
gi|424005104|ref|ZP_17748092.1| single-stranded DNA-binding protein [Vibrio cholerae HC-37A1]
gi|424022899|ref|ZP_17762566.1| single-stranded DNA-binding protein [Vibrio cholerae HC-62B1]
gi|424025917|ref|ZP_17765537.1| single-stranded DNA-binding protein [Vibrio cholerae HC-69A1]
gi|424585298|ref|ZP_18024894.1| single-stranded DNA-binding protein [Vibrio cholerae CP1030(3)]
gi|424589674|ref|ZP_18029121.1| single-stranded DNA-binding protein [Vibrio cholerae CP1037(10)]
gi|424593919|ref|ZP_18033262.1| single-stranded DNA-binding protein [Vibrio cholerae CP1040(13)]
gi|424597853|ref|ZP_18037055.1| single-stranded DNA-binding protein [Vibrio Cholerae CP1044(17)]
gi|424600618|ref|ZP_18039777.1| single-stranded DNA-binding protein [Vibrio cholerae CP1047(20)]
gi|424605534|ref|ZP_18044502.1| single-stranded DNA-binding protein [Vibrio cholerae CP1050(23)]
gi|424609251|ref|ZP_18048114.1| single-stranded DNA-binding protein [Vibrio cholerae HC-39A1]
gi|424612169|ref|ZP_18050980.1| single-stranded DNA-binding protein [Vibrio cholerae HC-41A1]
gi|424616047|ref|ZP_18054742.1| single-stranded DNA-binding protein [Vibrio cholerae HC-42A1]
gi|424620807|ref|ZP_18059338.1| single-stranded DNA-binding protein [Vibrio cholerae HC-47A1]
gi|424643627|ref|ZP_18081385.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A2]
gi|424651547|ref|ZP_18089075.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A2]
gi|424655495|ref|ZP_18092801.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A2]
gi|440708602|ref|ZP_20889264.1| single-stranded DNA-binding protein [Vibrio cholerae 4260B]
gi|443502446|ref|ZP_21069439.1| single-stranded DNA-binding protein [Vibrio cholerae HC-64A1]
gi|443506353|ref|ZP_21073151.1| single-stranded DNA-binding protein [Vibrio cholerae HC-65A1]
gi|443510189|ref|ZP_21076861.1| single-stranded DNA-binding protein [Vibrio cholerae HC-67A1]
gi|443514025|ref|ZP_21080570.1| single-stranded DNA-binding protein [Vibrio cholerae HC-68A1]
gi|443517838|ref|ZP_21084261.1| single-stranded DNA-binding protein [Vibrio cholerae HC-71A1]
gi|443522420|ref|ZP_21088670.1| single-stranded DNA-binding protein [Vibrio cholerae HC-72A2]
gi|443530324|ref|ZP_21096340.1| single-stranded DNA-binding protein [Vibrio cholerae HC-7A1]
gi|443537679|ref|ZP_21103536.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A1]
gi|449054373|ref|ZP_21733041.1| Single-stranded DNA-binding protein [Vibrio cholerae O1 str. Inaba
G4222]
gi|37999465|sp|Q9KUW2.1|SSB_VIBCH RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|9654818|gb|AAF93570.1| single-strand binding protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548170|gb|EAX58242.1| single-strand binding protein [Vibrio cholerae 2740-80]
gi|121630381|gb|EAX62776.1| single-strand binding protein [Vibrio cholerae V52]
gi|126511208|gb|EAZ73802.1| single-strand binding protein [Vibrio cholerae NCTC 8457]
gi|126520207|gb|EAZ77430.1| single-strand binding protein [Vibrio cholerae B33]
gi|146315127|gb|ABQ19666.1| single-strand binding protein [Vibrio cholerae O395]
gi|227008496|gb|ACP04708.1| single-strand binding protein [Vibrio cholerae M66-2]
gi|227012252|gb|ACP08462.1| single-strand binding protein [Vibrio cholerae O395]
gi|255738532|gb|EET93920.1| single-stranded DNA-binding protein [Vibrio cholera CIRS 101]
gi|262023974|gb|EEY42671.1| single-stranded DNA-binding protein [Vibrio cholerae RC27]
gi|262030631|gb|EEY49267.1| single-stranded DNA-binding protein [Vibrio cholerae INDRE 91/1]
gi|340043230|gb|EGR04189.1| single-stranded DNA-binding protein [Vibrio cholerae HCUF01]
gi|340043760|gb|EGR04717.1| single-stranded DNA-binding protein [Vibrio cholerae HC-49A2]
gi|341625752|gb|EGS51179.1| single-stranded DNA-binding protein [Vibrio cholerae HC-70A1]
gi|341627124|gb|EGS52450.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48A1]
gi|341641327|gb|EGS65883.1| single-stranded DNA-binding protein [Vibrio cholerae HFU-02]
gi|341648678|gb|EGS72719.1| single-stranded DNA-binding protein [Vibrio cholerae HC-38A1]
gi|356421593|gb|EHH75087.1| single-stranded DNA-binding protein [Vibrio cholerae HC-06A1]
gi|356422059|gb|EHH75543.1| single-stranded DNA-binding protein [Vibrio cholerae HC-21A1]
gi|356426866|gb|EHH80149.1| single-stranded DNA-binding protein [Vibrio cholerae HC-19A1]
gi|356433043|gb|EHH86236.1| single-stranded DNA-binding protein [Vibrio cholerae HC-23A1]
gi|356434813|gb|EHH87980.1| single-stranded DNA-binding protein [Vibrio cholerae HC-22A1]
gi|356438103|gb|EHH91154.1| single-stranded DNA-binding protein [Vibrio cholerae HC-28A1]
gi|356443487|gb|EHH96308.1| single-stranded DNA-binding protein [Vibrio cholerae HC-32A1]
gi|356447917|gb|EHI00702.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43A1]
gi|356450533|gb|EHI03252.1| single-stranded DNA-binding protein [Vibrio cholerae HC-33A2]
gi|356454087|gb|EHI06742.1| single-stranded DNA-binding protein [Vibrio cholerae HC-61A1]
gi|356456547|gb|EHI09144.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48B2]
gi|356648190|gb|AET28245.1| single-stranded DNA-binding protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378793782|gb|AFC57253.1| single-stranded DNA-binding protein [Vibrio cholerae IEC224]
gi|395922513|gb|EJH33329.1| single-stranded DNA-binding protein [Vibrio cholerae CP1032(5)]
gi|395923063|gb|EJH33875.1| single-stranded DNA-binding protein [Vibrio cholerae CP1041(14)]
gi|395925509|gb|EJH36306.1| single-stranded DNA-binding protein [Vibrio cholerae CP1038(11)]
gi|395931359|gb|EJH42104.1| single-stranded DNA-binding protein [Vibrio cholerae CP1042(15)]
gi|395934477|gb|EJH45215.1| single-stranded DNA-binding protein [Vibrio cholerae CP1046(19)]
gi|395937750|gb|EJH48461.1| single-stranded DNA-binding protein [Vibrio cholerae CP1048(21)]
gi|395946483|gb|EJH57146.1| single-stranded DNA-binding protein [Vibrio cholerae HC-20A2]
gi|395948391|gb|EJH59041.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46A1]
gi|395954978|gb|EJH65583.1| single-stranded DNA-binding protein [Vibrio cholerae HE-45]
gi|395964044|gb|EJH74286.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A2]
gi|395964277|gb|EJH74510.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A2]
gi|395967165|gb|EJH77265.1| single-stranded DNA-binding protein [Vibrio cholerae HC-42A1]
gi|395975726|gb|EJH85203.1| single-stranded DNA-binding protein [Vibrio cholerae HC-47A1]
gi|395977912|gb|EJH87304.1| single-stranded DNA-binding protein [Vibrio cholerae CP1030(3)]
gi|395979345|gb|EJH88697.1| single-stranded DNA-binding protein [Vibrio cholerae CP1047(20)]
gi|408010147|gb|EKG48019.1| single-stranded DNA-binding protein [Vibrio cholerae HC-39A1]
gi|408017079|gb|EKG54599.1| single-stranded DNA-binding protein [Vibrio cholerae HC-41A1]
gi|408036639|gb|EKG73061.1| single-stranded DNA-binding protein [Vibrio cholerae CP1037(10)]
gi|408037561|gb|EKG73949.1| single-stranded DNA-binding protein [Vibrio cholerae CP1040(13)]
gi|408045052|gb|EKG80921.1| single-stranded DNA-binding protein [Vibrio Cholerae CP1044(17)]
gi|408046960|gb|EKG82618.1| single-stranded DNA-binding protein [Vibrio cholerae CP1050(23)]
gi|408057596|gb|EKG92436.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A2]
gi|408611892|gb|EKK85248.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1033(6)]
gi|408628016|gb|EKL00796.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1035(8)]
gi|408643022|gb|EKL14762.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-50A2]
gi|408659005|gb|EKL30061.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-77A1]
gi|408660041|gb|EKL31071.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-62A1]
gi|408849312|gb|EKL89334.1| single-stranded DNA-binding protein [Vibrio cholerae HC-37A1]
gi|408849807|gb|EKL89810.1| single-stranded DNA-binding protein [Vibrio cholerae HC-17A2]
gi|408874533|gb|EKM13703.1| single-stranded DNA-binding protein [Vibrio cholerae HC-62B1]
gi|408881482|gb|EKM20363.1| single-stranded DNA-binding protein [Vibrio cholerae HC-69A1]
gi|439975869|gb|ELP51971.1| single-stranded DNA-binding protein [Vibrio cholerae 4260B]
gi|443433146|gb|ELS75663.1| single-stranded DNA-binding protein [Vibrio cholerae HC-64A1]
gi|443436977|gb|ELS83086.1| single-stranded DNA-binding protein [Vibrio cholerae HC-65A1]
gi|443440763|gb|ELS90444.1| single-stranded DNA-binding protein [Vibrio cholerae HC-67A1]
gi|443444630|gb|ELS97898.1| single-stranded DNA-binding protein [Vibrio cholerae HC-68A1]
gi|443448468|gb|ELT05097.1| single-stranded DNA-binding protein [Vibrio cholerae HC-71A1]
gi|443451489|gb|ELT11743.1| single-stranded DNA-binding protein [Vibrio cholerae HC-72A2]
gi|443458525|gb|ELT25920.1| single-stranded DNA-binding protein [Vibrio cholerae HC-7A1]
gi|443466504|gb|ELT41161.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A1]
gi|448266166|gb|EMB03396.1| Single-stranded DNA-binding protein [Vibrio cholerae O1 str. Inaba
G4222]
Length = 177
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|358012036|ref|ZP_09143846.1| single-stranded DNA-binding protein [Acinetobacter sp. P8-3-8]
Length = 197
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|229507037|ref|ZP_04396543.1| single-stranded DNA-binding protein [Vibrio cholerae BX 330286]
gi|229508808|ref|ZP_04398300.1| single-stranded DNA-binding protein [Vibrio cholerae B33]
gi|229519796|ref|ZP_04409239.1| single-stranded DNA-binding protein [Vibrio cholerae RC9]
gi|229520042|ref|ZP_04409471.1| single-stranded DNA-binding protein [Vibrio cholerae TM 11079-80]
gi|229606321|ref|YP_002876969.1| single-stranded DNA-binding protein [Vibrio cholerae MJ-1236]
gi|254850629|ref|ZP_05239979.1| single strand DNA-binding protein [Vibrio cholerae MO10]
gi|298501070|ref|ZP_07010871.1| single strand DNA-binding protein [Vibrio cholerae MAK 757]
gi|229342991|gb|EEO07980.1| single-stranded DNA-binding protein [Vibrio cholerae TM 11079-80]
gi|229344485|gb|EEO09460.1| single-stranded DNA-binding protein [Vibrio cholerae RC9]
gi|229354211|gb|EEO19142.1| single-stranded DNA-binding protein [Vibrio cholerae B33]
gi|229355782|gb|EEO20702.1| single-stranded DNA-binding protein [Vibrio cholerae BX 330286]
gi|229368976|gb|ACQ59399.1| single-stranded DNA-binding protein [Vibrio cholerae MJ-1236]
gi|254846334|gb|EET24748.1| single strand DNA-binding protein [Vibrio cholerae MO10]
gi|297540318|gb|EFH76378.1| single strand DNA-binding protein [Vibrio cholerae MAK 757]
Length = 183
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 11 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 62
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 63 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 120
Query: 199 G 199
G
Sbjct: 121 G 121
>gi|398884989|ref|ZP_10639912.1| single stranded DNA-binding protein [Pseudomonas sp. GM60]
gi|398193269|gb|EJM80379.1| single stranded DNA-binding protein [Pseudomonas sp. GM60]
Length = 179
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|398935316|ref|ZP_10666404.1| single stranded DNA-binding protein [Pseudomonas sp. GM41(2012)]
gi|398169802|gb|EJM57772.1| single stranded DNA-binding protein [Pseudomonas sp. GM41(2012)]
Length = 176
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|419241318|ref|ZP_13783987.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC9D]
gi|378097689|gb|EHW59437.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC9D]
Length = 179
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG+ G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRQGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|423729782|ref|ZP_17703103.1| single-stranded DNA-binding family protein, partial [Vibrio
cholerae HC-17A1]
gi|408627797|gb|EKL00596.1| single-stranded DNA-binding family protein, partial [Vibrio
cholerae HC-17A1]
Length = 176
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|333917307|ref|YP_004491039.1| single-strand binding protein [Delftia sp. Cs1-4]
gi|333747507|gb|AEF92684.1| single-strand binding protein [Delftia sp. Cs1-4]
Length = 189
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|329890208|ref|ZP_08268551.1| single-stranded DNA-binding protein [Brevundimonas diminuta ATCC
11568]
gi|328845509|gb|EGF95073.1| single-stranded DNA-binding protein [Brevundimonas diminuta ATCC
11568]
Length = 166
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + L +G V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEIRSLNNGDRVANLRIATSETWRDKATGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ + + V +L GST+YVEG+L+ + + D G+ + EI I+R NG+L L
Sbjct: 57 VVIFNDNIVKVAENYLKKGSTVYVEGSLQTRKWTDQ-QGVEKYSTEIVIQRFNGQLTML 114
>gi|319898823|ref|YP_004158916.1| single-strand DNA binding protein [Bartonella clarridgeiae 73]
gi|319402787|emb|CBI76336.1| single-strand DNA binding protein [Bartonella clarridgeiae 73]
Length = 162
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG-- 199
++ E L VV ++L GS IY+EG L+ + + D +G R EI ++R G L L
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-SGNDRYTTEIVLQRYRGELQMLNSR 117
Query: 200 KGGDAQPPSPSEVRGAGY 217
+ G + S G G+
Sbjct: 118 EIGSGEQISSVNQSGGGF 135
>gi|133756485|ref|YP_001096441.1| single-strand binding protein [Escherichia coli]
gi|237702566|ref|ZP_04533047.1| single strand DNA binding protein [Escherichia sp. 3_2_53FAA]
gi|298378810|ref|ZP_06988692.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|312964349|ref|ZP_07778643.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|410593381|ref|YP_006953504.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609750|ref|YP_006953930.1| single-stranded DNA-binding protein [Escherichia coli]
gi|419184106|ref|ZP_13727658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|419189576|ref|ZP_13733070.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|420133538|ref|ZP_14641759.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|422789326|ref|ZP_16842056.1| single-strand binding protein [Escherichia coli H489]
gi|423705354|ref|ZP_17679773.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|425189699|ref|ZP_18586935.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|429339530|ref|YP_006990741.1| single-stranded DNA-binding protein [Escherichia coli]
gi|432455052|ref|ZP_19697259.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE201]
gi|432492986|ref|ZP_19734817.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE214]
gi|432541544|ref|ZP_19778407.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE236]
gi|432547589|ref|ZP_19784378.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE237]
gi|432978801|ref|ZP_20167617.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE209]
gi|432993047|ref|ZP_20181678.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE218]
gi|433061128|ref|ZP_20248112.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE124]
gi|433090275|ref|ZP_20276602.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE137]
gi|433118374|ref|ZP_20304135.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE153]
gi|444928181|ref|ZP_21247398.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|451770718|ref|YP_007447530.1| single-stranded DNA-binding protein [Escherichia coli]
gi|89033310|gb|ABD59988.1| single-strand binding protein [Escherichia coli]
gi|226903347|gb|EEH89606.1| single strand DNA binding protein [Escherichia sp. 3_2_53FAA]
gi|298280419|gb|EFI21922.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|312290826|gb|EFR18702.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|323958995|gb|EGB54666.1| single-strand binding protein [Escherichia coli H489]
gi|359359327|gb|AEV41191.1| single-stranded DNA-binding protein [Escherichia coli]
gi|378019474|gb|EHV82304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|378021978|gb|EHV84669.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|385704131|gb|EIG41213.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|386118422|gb|AFI99210.1| single-stranded DNA-binding protein [Escherichia coli]
gi|394425238|gb|EJE98236.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|408099988|gb|EKH32565.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|410832562|gb|AFV92799.1| single-stranded DNA-binding protein [Escherichia coli]
gi|430985769|gb|ELD02353.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE201]
gi|431031141|gb|ELD44041.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE214]
gi|431078562|gb|ELD85612.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE236]
gi|431084327|gb|ELD90491.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE237]
gi|431478555|gb|ELH58301.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE209]
gi|431514838|gb|ELH92678.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE218]
gi|431562205|gb|ELI35526.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE124]
gi|431596701|gb|ELI66648.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE137]
gi|431627649|gb|ELI96043.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE153]
gi|444534878|gb|ELV15061.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|449535700|gb|AGE98070.1| single-stranded DNA-binding protein [Escherichia coli]
Length = 175
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|395789756|ref|ZP_10469265.1| single-strand binding protein [Bartonella taylorii 8TBB]
gi|395428319|gb|EJF94398.1| single-strand binding protein [Bartonella taylorii 8TBB]
Length = 150
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G P K + SG V F + T ++ + TE WH +
Sbjct: 4 KVTLIGRLGADPESKTMPSGGEVVNFRMATSESYTDKNTHQKVEKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL-GKG 201
V+ L + +++L GS +YVEG L+ + + D G + + G L L K
Sbjct: 56 VFNPHLAKIALQYLSKGSKVYVEGKLQTRKWKDKNGGEHLATEIVLPQFKGELYLLDAKK 115
Query: 202 GDAQPPSPSEVRGAGY 217
+ PP+PS + Y
Sbjct: 116 EQSAPPTPSLITSQSY 131
>gi|395793469|ref|ZP_10472871.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713793|ref|ZP_17688053.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421887|gb|EJF88112.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395430851|gb|EJF96880.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 145
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G +P +K + +G V F + T ++R + + TE WH V
Sbjct: 4 KVILIGYLGANPEKKTMNNGTEVVNFRMATSESYTDKRTNQKVSKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L G +Y+EG L+ + + D G EI + G L L GK
Sbjct: 56 VFNPHLAKIALQYLHKGRKVYIEGQLQTRKWQDK-NGQDHYTTEIVLPHYKGDLKLLDGK 114
Query: 201 GGDAQPPSPSE 211
D Q SP +
Sbjct: 115 NDDNQEQSPYD 125
>gi|302595385|ref|YP_003829247.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302595504|ref|YP_003829122.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302310145|gb|ADL14016.1| Ssb [Escherichia coli]
gi|302310273|gb|ADL14141.1| Ssb [Escherichia coli]
Length = 210
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 40 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 91
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 92 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 148
Query: 200 KGGDAQ 205
+ Q
Sbjct: 149 RAAGTQ 154
>gi|197284784|ref|YP_002150656.1| single-strand binding protein [Proteus mirabilis HI4320]
gi|194682271|emb|CAR42014.1| single-strand binding protein [Proteus mirabilis HI4320]
Length = 165
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + L SG V ++ T +++ EN TE WHRV
Sbjct: 8 KVILIGNLGRDPEIRYLPSGGAVANLAVATSEKWRDKQTGENREKTE--------WHRVV 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
++ +L + +L GS +Y+EG L+ + ++D G+ R EI ++ G + LG
Sbjct: 60 LFG-KLADIASGYLCKGSQVYIEGQLQTREWDD--NGVKRYTTEIVVKIGGSMQMLG 113
>gi|417194609|ref|ZP_12015556.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|419213249|ref|ZP_13756286.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|420101129|ref|ZP_14612258.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9455]
gi|420106899|ref|ZP_14617278.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|33323524|gb|AAQ07494.1|AF503408_18 Ssb [Enterobacteria phage P7]
gi|378044325|gb|EHW06744.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|386189643|gb|EIH78404.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|394414649|gb|EJE88588.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|394417997|gb|EJE91702.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9455]
Length = 162
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G TV S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGTVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 RVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|90576561|ref|YP_534803.1| putative single strand binding protein Ssb [Pseudomonas putida]
gi|90567914|dbj|BAE92137.1| putative single strand binding protein Ssb [Pseudomonas putida]
Length = 149
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEKWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLLG 112
>gi|90416591|ref|ZP_01224522.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[gamma proteobacterium HTCC2207]
gi|90331790|gb|EAS47018.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[gamma proteobacterium HTCC2207]
Length = 171
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG GQ P + L SG VT SL T ++ E + TE WH
Sbjct: 4 GINKVIIVGNCGQDPETRYLPSGGAVTNMSLATSESWKDKNTGEQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
+V V+ RLG + ++L GS +YVEG+L + +
Sbjct: 56 KV-VFFNRLGEIAGEYLKKGSKVYVEGSLRTRKW 88
>gi|37912973|gb|AAR05305.1| predicted single-stranded DNA-binding protein [uncultured marine
gamma proteobacterium EB000-45B06]
gi|40063204|gb|AAR38041.1| single-strand binding protein [uncultured marine bacterium 562]
Length = 146
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + V S+ T ++ E + TE WH
Sbjct: 4 GVNKVILVGNLGQKPEMRYTATQSAVANISIATTESWKDKESGEMRDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V VY +L +V K+L GS++Y+EG L+ + + D +G R EI L LG
Sbjct: 56 KV-VYFGKLAEIVEKYLDKGSSVYIEGKLQTRKWQDK-SGADRWTTEIV---GNELTMLG 110
Query: 200 KGGDAQPPSPSEV 212
PS S V
Sbjct: 111 SRASNSNPSQSPV 123
>gi|194337561|ref|YP_002019355.1| single-strand binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310038|gb|ACF44738.1| single-strand binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 158
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG-GIRNNRRPLENENPTEYANRCAVQW 138
G+ K +L+G +G P K SG++ F+L T ++N L+ +W
Sbjct: 4 GLNKVMLIGHLGNDPEMKVTTSGQSRVTFTLATNENFKDNNGNLQER----------TEW 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
HR+ V+ +L + ++L G +YVEG L+ + ++DP G R EI
Sbjct: 54 HRIVVWA-KLAEICSQYLKKGRQVYVEGRLQTRSWDDPKNGEKRYTTEIVC 103
>gi|325919581|ref|ZP_08181593.1| single-strand binding protein [Xanthomonas gardneri ATCC 19865]
gi|325549917|gb|EGD20759.1| single-strand binding protein [Xanthomonas gardneri ATCC 19865]
Length = 174
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R E N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------EGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +Y+EG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYIEGEL 82
>gi|410091921|ref|ZP_11288467.1| single-stranded DNA-binding protein [Pseudomonas viridiflava
UASWS0038]
gi|409760780|gb|EKN45900.1| single-stranded DNA-binding protein [Pseudomonas viridiflava
UASWS0038]
Length = 184
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLLG 112
>gi|407368359|ref|ZP_11114891.1| protein Ssb [Pseudomonas mandelii JR-1]
Length = 175
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398852125|ref|ZP_10608794.1| single stranded DNA-binding protein [Pseudomonas sp. GM80]
gi|398245001|gb|EJN30533.1| single stranded DNA-binding protein [Pseudomonas sp. GM80]
Length = 174
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398860791|ref|ZP_10616435.1| single stranded DNA-binding protein [Pseudomonas sp. GM79]
gi|398234231|gb|EJN20114.1| single stranded DNA-binding protein [Pseudomonas sp. GM79]
Length = 175
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398999055|ref|ZP_10701808.1| single stranded DNA-binding protein [Pseudomonas sp. GM18]
gi|398132674|gb|EJM21936.1| single stranded DNA-binding protein [Pseudomonas sp. GM18]
Length = 173
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398838638|ref|ZP_10595912.1| single stranded DNA-binding protein [Pseudomonas sp. GM102]
gi|398901736|ref|ZP_10650527.1| single stranded DNA-binding protein [Pseudomonas sp. GM50]
gi|398993726|ref|ZP_10696664.1| single stranded DNA-binding protein [Pseudomonas sp. GM21]
gi|398115509|gb|EJM05291.1| single stranded DNA-binding protein [Pseudomonas sp. GM102]
gi|398134069|gb|EJM23244.1| single stranded DNA-binding protein [Pseudomonas sp. GM21]
gi|398179347|gb|EJM66959.1| single stranded DNA-binding protein [Pseudomonas sp. GM50]
Length = 174
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|293610618|ref|ZP_06692918.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375136369|ref|YP_004997019.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter calcoaceticus PHEA-2]
gi|292826962|gb|EFF85327.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123814|gb|ADY83337.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter calcoaceticus PHEA-2]
Length = 195
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|432673217|ref|ZP_19908725.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
gi|431206635|gb|ELF05014.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
Length = 162
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G TV S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGTVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 RVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|315122781|ref|YP_004063270.1| single-strand binding protein (ssb) [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496183|gb|ADR52782.1| single-strand binding protein (ssb) [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 155
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
+ K IL+G +G P + + GR + + T +R E TE W
Sbjct: 3 ASVNKVILIGNLGADPDVRHTQDGRRIVNIRVATSENWKDRVTGERREKTE--------W 54
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
H V V+ E LG VV ++L GS +Y+EG+++ + + D +G R EI +R +V L
Sbjct: 55 HSVVVFVEELGKVVEQYLKKGSKVYIEGSIQTRKWQDQ-SGNTRYTTEIIMR---NMVML 110
Query: 199 GKGGDAQPPSP 209
D + SP
Sbjct: 111 ----DGRKDSP 117
>gi|183600864|ref|ZP_02962357.1| hypothetical protein PROSTU_04464 [Providencia stuartii ATCC 25827]
gi|188019647|gb|EDU57687.1| single-strand binding family protein [Providencia stuartii ATCC
25827]
Length = 157
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGHLGQDPEIRYMPNGGAVANLALATSESWRDKQTGEMKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG+L+ + + D +G R E+ + G + L
Sbjct: 57 RVVIFG-KLAEIADEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 199 GKGGDAQP 206
G GG+ Q
Sbjct: 115 GNGGNNQA 122
>gi|194430472|ref|ZP_03062950.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B171]
gi|194411483|gb|EDX27827.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B171]
Length = 175
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQMLG 113
>gi|395782511|ref|ZP_10462898.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
gi|395418006|gb|EJF84342.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
Length = 147
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G +P K + SG V F + T ++ + + TE WH +
Sbjct: 4 KVILIGHLGANPESKTMSSGAEVVNFRIATFESYTDKAANKKIDKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G+ R + E+ + + G L L GK
Sbjct: 56 VFNPHLAKIALQYLNKGSKVYIEGQLQTRKWQDK-NGIERFVTEVILPKYKGDLKLLDGK 114
Query: 201 GGDAQ 205
D Q
Sbjct: 115 NDDNQ 119
>gi|411011830|ref|ZP_11388159.1| single-strand binding protein [Aeromonas aquariorum AAK1]
gi|423198567|ref|ZP_17185150.1| single-stranded DNA-binding protein [Aeromonas hydrophila SSU]
gi|404630100|gb|EKB26808.1| single-stranded DNA-binding protein [Aeromonas hydrophila SSU]
Length = 191
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|393720329|ref|ZP_10340256.1| single-stranded DNA-binding protein (SSB) [Sphingomonas echinoides
ATCC 14820]
Length = 183
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K I+VG +G+ P + ++G V + T ++ E + TE WH V+
Sbjct: 8 KVIIVGNLGRDPESRTFQNGGKVVNLRIATSETWKDKNTGERKEQTE--------WHSVA 59
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ E LGGV ++L GS +Y+EG L+ + + D +G + EI ++ NG L L
Sbjct: 60 IFNEALGGVAERYLRKGSKVYIEGALKTRKWQDA-SGADKYSTEIVLQGFNGVLTML 115
>gi|188581452|ref|YP_001924897.1| single-strand binding protein [Methylobacterium populi BJ001]
gi|179344950|gb|ACB80362.1| single-strand binding protein [Methylobacterium populi BJ001]
Length = 183
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLASGDPVVNLRIATSESWKDKMSGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V +Y E L V ++L GS +Y+EG L+ + + D +G + E+ ++R G + L
Sbjct: 57 VVIYNENLARVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQRFRGEMTIL 114
>gi|262277205|ref|ZP_06054998.1| single-strand binding protein family protein [alpha proteobacterium
HIMB114]
gi|262224308|gb|EEY74767.1| single-strand binding protein family protein [alpha proteobacterium
HIMB114]
Length = 152
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K++ +G+ V SL T ++ E + TE WHRV
Sbjct: 7 KVLLIGRLGNDPEIKQMSNGKNVARLSLATSETWKDKNTGERKEKTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
++ E L VV ++L G+ +Y+EG ++ + D
Sbjct: 59 IFNEGLVNVVQQYLKKGAQVYIEGQIQTTKYTD 91
>gi|451940273|ref|YP_007460911.1| single-strand binding protein [Bartonella australis Aust/NH1]
gi|451899660|gb|AGF74123.1| single-strand binding protein [Bartonella australis Aust/NH1]
Length = 152
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
+ G+ K IL+G +G P L SG V +L T + +R+ E R V
Sbjct: 1 MASGVNKVILLGNLGADPKISSLNSGDRVANLTLATSEVWKDRKTGEK--------RERV 52
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+WH V ++ ERL + +L G IYVEG L+ + + D
Sbjct: 53 EWHNVVIFDERLVKLAEHYLKKGHKIYVEGQLQTRKWQD 91
>gi|262042193|ref|ZP_06015366.1| single-strand binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040515|gb|EEW41613.1| single-strand binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 220
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 45 GVNKVILVGYLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 96
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + E+ + +NG + LG
Sbjct: 97 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDD-AGVTRYVTEVLVGQNGTMQMLG 154
>gi|134910|sp|P28045.2|SSBR_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
Length = 175
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQMLG 113
>gi|359430093|ref|ZP_09221107.1| single-stranded DNA-binding protein [Acinetobacter sp. NBRC 100985]
gi|358234491|dbj|GAB02646.1| single-stranded DNA-binding protein [Acinetobacter sp. NBRC 100985]
Length = 192
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|398990499|ref|ZP_10693681.1| single stranded DNA-binding protein [Pseudomonas sp. GM24]
gi|399015355|ref|ZP_10717629.1| single stranded DNA-binding protein [Pseudomonas sp. GM16]
gi|398108709|gb|EJL98659.1| single stranded DNA-binding protein [Pseudomonas sp. GM16]
gi|398144101|gb|EJM32961.1| single stranded DNA-binding protein [Pseudomonas sp. GM24]
Length = 174
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|240850554|ref|YP_002971954.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267677|gb|ACS51265.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 142
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 85 ILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVY 144
+L+G++G P K + SG V FS+ T ++ + TE WH V ++
Sbjct: 1 MLIGRLGADPESKTMNSGTEVVNFSIATSESYTDKNTHQKVEKTE--------WHSVVIF 52
Query: 145 PERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFLGKGGD 203
L + +++L GS +YVEG L+ + + D G R EI + + G L L +
Sbjct: 53 NPHLAKIALQYLNKGSKVYVEGKLQTRKWQDK-NGHDRYTTEIVLPQFKGELYLLDAKKE 111
Query: 204 AQPPS 208
PS
Sbjct: 112 QSAPS 116
>gi|432417345|ref|ZP_19659954.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE44]
gi|430940109|gb|ELC60303.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE44]
Length = 179
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|389877424|ref|YP_006370989.1| single-strand DNA binding protein [Tistrella mobilis KA081020-065]
gi|388528208|gb|AFK53405.1| single-strand DNA binding protein [Tistrella mobilis KA081020-065]
Length = 213
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + + G + ++ T +R+ E TE WHRV
Sbjct: 7 KVILIGNLGRDPEVRSTQDGMKIVNLAVATSETWRDRQSGERRERTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
++ ERL V K L GS +YVEG L+ + + D G + E+ ++R G L L
Sbjct: 59 IFNERLAEVAEKFLRKGSKVYVEGALQTRKWTDQ-QGQEKYTTEVVLQRFRGELTML 114
>gi|334704419|ref|ZP_08520285.1| Single-stranded DNA-binding protein [Aeromonas caviae Ae398]
Length = 189
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|399117093|emb|CCG19907.1| single-stranded DNA-binding protein [Taylorella asinigenitalis
14/45]
Length = 167
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G++G P + + R VT SLGT + N+R E TE WHR
Sbjct: 3 VNKVILIGRLGNDPDVRTGQDNRVVTRISLGTNLVWNDRNTGERREETE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
V V+ R V +L G+ +YVEG L+ + D G+ + +I L LG
Sbjct: 55 V-VFFGRTAEVARDYLKKGAQVYVEGRLKTNKYQDK-DGIEKYSTDIIAE---TLKMLGS 109
Query: 201 GGDAQPPS-----------PSEVRGAGY 217
GD+ S PS G GY
Sbjct: 110 KGDSDSGSGYSRESTSNQRPSRSSGTGY 137
>gi|417843724|ref|ZP_12489792.1| single-stranded DNA-binding protein [Haemophilus haemolyticus
M21127]
gi|341948637|gb|EGT75257.1| single-stranded DNA-binding protein [Haemophilus haemolyticus
M21127]
Length = 154
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I++G +G +P + +++G TV FS+ T ++ E TE WH
Sbjct: 3 GINKVIIIGNLGNAPEIRAMQNGDTVANFSVATSESWVDKNTQEKRENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ +Y RL + ++L GS +YVEG L+ + + D G + EI L LG
Sbjct: 55 RIVLY-RRLADIAGQYLRKGSKVYVEGKLKTRQWQDE-KGQTHYVTEII---GSYLEMLG 109
Query: 200 KGGDAQPPSPS 210
+ PS
Sbjct: 110 SKAENNQIDPS 120
>gi|442609607|ref|ZP_21024344.1| Single-stranded DNA-binding protein [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441749079|emb|CCQ10406.1| Single-stranded DNA-binding protein [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 18/146 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V S+ T +++N + R +WH
Sbjct: 4 GVNKVILVGNLGQDPEVRYMPNGNGVANISIAT------TDSWKDKNTGQLQERT--EWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L+ + + D G R EI + G++ LG
Sbjct: 56 RVVLF-GKLAEVAGEYLRKGSQVYIEGRLQTRKWTDQ-GGQERYTTEIVVDMGGQMQMLG 113
Query: 200 ------KGGDAQPP--SPSEVRGAGY 217
GG P +P++ G GY
Sbjct: 114 GRTEGQSGGYQNAPQSAPAQNHGGGY 139
>gi|381172507|ref|ZP_09881634.1| single-stranded DNA-binding protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687074|emb|CCG38121.1| single-stranded DNA-binding protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 178
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|406914607|gb|EKD53771.1| Single-stranded DNA-binding protein [uncultured bacterium]
Length = 148
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K IL+G +G+ P + +G V ++ T +++ EN+ TE WHR
Sbjct: 6 INKVILIGNLGRDPEVRYTPNGLAVANITIATSEAWKDKQTGENQERTE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
+ +Y RL + ++L GS IY+EG L+ + + D TG R EI + + K
Sbjct: 58 IVLYG-RLAEIAGEYLRKGSKIYIEGRLQTRKWQDKNTGQDRYTTEIVA--DSLQMLDSK 114
Query: 201 GGDAQPPS-PSEVR 213
G Q S PS V+
Sbjct: 115 GSSHQQQSEPSAVK 128
>gi|384228513|ref|YP_005620248.1| single-strand binding protein [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
gi|345539446|gb|AEO08313.1| single-strand binding protein [Buchnera aphidicola str. Ua
(Uroleucon ambrosiae)]
Length = 171
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T ++ E++ TE WH
Sbjct: 5 GINKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGEHKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + G + LG
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGALQTRKWQDQ-NGIERYTTEIIVNIGGTMQMLG 114
>gi|170750135|ref|YP_001756395.1| single-strand binding protein [Methylobacterium radiotolerans JCM
2831]
gi|170656657|gb|ACB25712.1| single-strand binding protein [Methylobacterium radiotolerans JCM
2831]
Length = 186
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V L T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V +Y + L V ++L GS +Y+EG L+ + + D +G+ + E+ ++R G + L
Sbjct: 57 VVIYNDNLARVAEQYLRKGSKVYIEGQLQTRKWTDN-SGVEKYTTEVVLQRFRGEMTIL 114
>gi|163868582|ref|YP_001609791.1| single-strand DNA binding protein [Bartonella tribocorum CIP
105476]
gi|161018238|emb|CAK01796.1| single-strand DNA binding protein [Bartonella tribocorum CIP
105476]
Length = 168
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGSDPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ E L VV ++L GS IY+EG L+ + + D G R EI +++ G L L G+
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLDGR 117
Query: 201 GG 202
GG
Sbjct: 118 GG 119
>gi|429331908|ref|ZP_19212648.1| single-strand binding protein [Pseudomonas putida CSV86]
gi|428763419|gb|EKX85594.1| single-strand binding protein [Pseudomonas putida CSV86]
Length = 171
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLLG 112
>gi|424792452|ref|ZP_18218684.1| Single-stranded DNA binding protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422797083|gb|EKU25474.1| Single-stranded DNA binding protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 175
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG++
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSI 82
>gi|298155818|ref|YP_003717644.1| putative single-stranded DNA binding protein [Escherichia coli ETEC
1392/75]
gi|297374415|emb|CBL93476.1| putative single-stranded DNA binding protein [Escherichia coli ETEC
1392/75]
Length = 185
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 17 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 68
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 69 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 125
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 126 SAPQQNAQAQP 136
>gi|9507481|ref|NP_052488.1| single-stranded DNA binding protein [Shigella sonnei]
gi|32470197|ref|NP_863421.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|194447180|ref|YP_002043888.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|300907627|ref|ZP_07125257.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|301307185|ref|ZP_07213210.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|410651579|ref|YP_006954701.1| single-stranded DNA-binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|410654715|ref|YP_006954602.1| single-stranded DNA binding protein [Salmonella enterica]
gi|415867803|ref|ZP_11539615.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|418818975|ref|ZP_13374438.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|422034292|ref|ZP_16380318.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|422962938|ref|ZP_16973033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|450202549|ref|ZP_21893471.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|134906|sp|P18022.3|SSBP_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
gi|144656|gb|AAA98056.1| single-stranded DNA-binding protein [Plasmid ColIb-P9]
gi|4512478|dbj|BAA75127.1| single-stranded DNA binding protein [Shigella sonnei]
gi|4688844|emb|CAB41502.1| SSB protein [Escherichia coli]
gi|20521565|dbj|BAB91629.1| single strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|70610212|gb|AAZ05359.1| single-stranded DNA binding protein [Salmonella enterica]
gi|194405484|gb|ACF65705.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|300400651|gb|EFJ84189.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|300837616|gb|EFK65376.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|315252769|gb|EFU32737.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|321271609|gb|ADW79697.1| single-stranded DNA-binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|371591843|gb|EHN80777.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|392784334|gb|EJA40936.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|414010289|gb|EKS94314.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|449312243|gb|EMD02511.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 175
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQMLG 113
>gi|28198915|ref|NP_779229.1| single-stranded DNA-binding protein [Xylella fastidiosa Temecula1]
gi|182681623|ref|YP_001829783.1| single-stranded DNA-binding protein [Xylella fastidiosa M23]
gi|386085111|ref|YP_006001393.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417557931|ref|ZP_12208934.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
gi|28057013|gb|AAO28878.1| single-stranded DNA binding protein [Xylella fastidiosa Temecula1]
gi|182631733|gb|ACB92509.1| single-strand binding protein [Xylella fastidiosa M23]
gi|307580058|gb|ADN64027.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338179463|gb|EGO82406.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
Length = 148
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREIAIRRNGRLVF 197
RV + +LG + ++L GS Y+EG + F ND G R + EI + L
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGAIRYDKFTGND---GQDRYVTEIIADQMHMLGG 110
Query: 198 LGKGGDAQPPS--PSEVR 213
G+G P P++VR
Sbjct: 111 RGEGSSGITPQRRPAKVR 128
>gi|374619089|ref|ZP_09691623.1| single stranded DNA-binding protein [gamma proteobacterium HIMB55]
gi|374302316|gb|EHQ56500.1| single stranded DNA-binding protein [gamma proteobacterium HIMB55]
Length = 157
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L SG VT S+ T +++N + R +WH
Sbjct: 5 GINKVILVGNLGQEPEHRVLPSGGGVTNISIATS------ESWKDKNTGQMQERT--EWH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ RL + ++L GS +YVEG+L + + D +G R EI
Sbjct: 57 RV-VFFNRLAEIASEYLRKGSKVYVEGSLRTRKWQDQ-SGQDRYTTEI 102
>gi|163793153|ref|ZP_02187129.1| single-strand DNA binding protein [alpha proteobacterium BAL199]
gi|159181799|gb|EDP66311.1| single-strand DNA binding protein [alpha proteobacterium BAL199]
Length = 206
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + G + F+L T ++ E TE WHR
Sbjct: 28 VNKVILVGNLGRDPEVRTTQDGTKIVNFTLATSENWRDKSSGERRERTE--------WHR 79
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L + ++L GS++YVEG L+ + + D G R E+ ++R G + L
Sbjct: 80 VVIFNENLARIAEQYLRKGSSVYVEGALQTRKWTDK-DGQERYTTEVVLQRFRGEMTLL 137
>gi|117620675|ref|YP_858391.1| single-strand binding protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562082|gb|ABK39030.1| single-strand binding protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 192
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|421497465|ref|ZP_15944633.1| ssb [Aeromonas media WS]
gi|407183530|gb|EKE57419.1| ssb [Aeromonas media WS]
Length = 191
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSDTWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|398868939|ref|ZP_10624328.1| single stranded DNA-binding protein [Pseudomonas sp. GM78]
gi|398232200|gb|EJN18175.1| single stranded DNA-binding protein [Pseudomonas sp. GM78]
Length = 172
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398874812|ref|ZP_10630012.1| single stranded DNA-binding protein [Pseudomonas sp. GM74]
gi|398910792|ref|ZP_10655208.1| single stranded DNA-binding protein [Pseudomonas sp. GM49]
gi|398925583|ref|ZP_10661957.1| single stranded DNA-binding protein [Pseudomonas sp. GM48]
gi|398171944|gb|EJM59832.1| single stranded DNA-binding protein [Pseudomonas sp. GM48]
gi|398185133|gb|EJM72550.1| single stranded DNA-binding protein [Pseudomonas sp. GM49]
gi|398194035|gb|EJM81120.1| single stranded DNA-binding protein [Pseudomonas sp. GM74]
Length = 172
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|374263385|ref|ZP_09621933.1| single strand binding protein [Legionella drancourtii LLAP12]
gi|363535975|gb|EHL29421.1| single strand binding protein [Legionella drancourtii LLAP12]
Length = 159
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 12/125 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VG P + L +G VT S+ T ++ E ++ TE WH
Sbjct: 4 GINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSESWKDKTTGEKQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV + RLG + +++ GS +YVEG+L + + D G R EI N +
Sbjct: 56 RVVCF-NRLGEIAGQYVRKGSKLYVEGSLRTRKWQDQ-QGQDRYTTEIVA--NDIQMLDS 111
Query: 200 KGGDA 204
KGG A
Sbjct: 112 KGGSA 116
>gi|49475156|ref|YP_033197.1| Aingle-strand binding protein SSB [Bartonella henselae str.
Houston-1]
gi|49237961|emb|CAF27165.1| Aingle-strand binding protein SSB [Bartonella henselae str.
Houston-1]
Length = 148
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 11/129 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G P K + SG V F + T N+ + TE WH V
Sbjct: 4 KVMLIGYLGDDPESKTITSGAEVVNFRMATSESYMNKNTYQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ + +++L GS +Y+EG L+ + + D G R EI + + G L L K
Sbjct: 56 VFNPHFAKIALQYLHKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLPQYKGELHLLDAK 114
Query: 201 GGDAQPPSP 209
++ PSP
Sbjct: 115 KEQSEHPSP 123
>gi|301048746|ref|ZP_07195753.1| single-strand binding family protein, partial [Escherichia coli MS
185-1]
gi|300299424|gb|EFJ55809.1| single-strand binding family protein [Escherichia coli MS 185-1]
Length = 199
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 29 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 80
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 81 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 137
>gi|78048605|ref|YP_364780.1| single-stranded DNA-binding protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325925952|ref|ZP_08187319.1| single-strand binding protein [Xanthomonas perforans 91-118]
gi|346725720|ref|YP_004852389.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
citrumelo F1]
gi|78037035|emb|CAJ24766.1| single-stranded DNA binding protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325543617|gb|EGD15033.1| single-strand binding protein [Xanthomonas perforans 91-118]
gi|346650467|gb|AEO43091.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 177
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|21243632|ref|NP_643214.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|37999445|sp|Q8PIJ2.1|SSB_XANAC RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21109208|gb|AAM37750.1| single-stranded DNA binding protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 180
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|418516614|ref|ZP_13082786.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418519584|ref|ZP_13085636.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410705028|gb|EKQ63507.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410706630|gb|EKQ65088.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 178
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|423204189|ref|ZP_17190745.1| single-stranded DNA-binding protein [Aeromonas veronii AMC34]
gi|404627394|gb|EKB24195.1| single-stranded DNA-binding protein [Aeromonas veronii AMC34]
Length = 192
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|294626300|ref|ZP_06704903.1| single-strand DNA-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666654|ref|ZP_06731891.1| single-strand DNA-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599446|gb|EFF43580.1| single-strand DNA-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603560|gb|EFF46974.1| single-strand DNA-binding protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 176
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|429907768|ref|ZP_19373735.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429396552|gb|EKZ32902.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9990]
Length = 175
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K +LVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQMLG 113
>gi|330828125|ref|YP_004391077.1| Single-stranded DNA-binding protein [Aeromonas veronii B565]
gi|406674618|ref|ZP_11081812.1| single-strand binding protein [Aeromonas veronii AMC35]
gi|423203409|ref|ZP_17189987.1| single-strand binding protein [Aeromonas veronii AER39]
gi|423211186|ref|ZP_17197739.1| single-strand binding protein [Aeromonas veronii AER397]
gi|328803261|gb|AEB48460.1| Single-stranded DNA-binding protein [Aeromonas veronii B565]
gi|404613153|gb|EKB10189.1| single-strand binding protein [Aeromonas veronii AER39]
gi|404613781|gb|EKB10794.1| single-strand binding protein [Aeromonas veronii AER397]
gi|404628621|gb|EKB25396.1| single-strand binding protein [Aeromonas veronii AMC35]
Length = 195
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQD-QSGQERYTTEVLV 104
>gi|422784247|ref|ZP_16837029.1| single-strand binding protein [Escherichia coli TW10509]
gi|323974708|gb|EGB69823.1| single-strand binding protein [Escherichia coli TW10509]
Length = 173
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|420104403|ref|ZP_14615099.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9455]
gi|394404118|gb|EJE79586.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9455]
Length = 172
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 2 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 53
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 54 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 110
Query: 200 K--GGDAQPPSPSEVRG 214
+ G QP + G
Sbjct: 111 RAAGTQTQPEEAQQFSG 127
>gi|331675750|ref|ZP_08376468.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H591]
gi|331076524|gb|EGI47800.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H591]
Length = 186
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
>gi|262373715|ref|ZP_06066993.1| single-stranded DNA-binding protein [Acinetobacter junii SH205]
gi|262311468|gb|EEY92554.1| single-stranded DNA-binding protein [Acinetobacter junii SH205]
Length = 194
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 16/144 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ V RLG + ++L GS +Y+EG+L + + D G R EI + L
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYSTEIRGDQMQMLDSRQ 112
Query: 200 KGGDAQP------PSPSEVRGAGY 217
+GG+ Q P + +G GY
Sbjct: 113 QGGEHQAGNDFNQPRFNNNQGGGY 136
>gi|388467353|ref|ZP_10141563.1| single-strand DNA-binding protein [Pseudomonas synxantha BG33R]
gi|388010933|gb|EIK72120.1| single-strand DNA-binding protein [Pseudomonas synxantha BG33R]
Length = 171
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|398878877|ref|ZP_10633982.1| single stranded DNA-binding protein [Pseudomonas sp. GM67]
gi|398197996|gb|EJM84964.1| single stranded DNA-binding protein [Pseudomonas sp. GM67]
Length = 174
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|400406509|ref|YP_006589257.1| single stranded DNA-binding protein [secondary endosymbiont of
Heteropsylla cubana]
gi|400364762|gb|AFP85829.1| single stranded DNA-binding protein [secondary endosymbiont of
Heteropsylla cubana]
Length = 175
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + + +G V +L T +++ E+ TE WH
Sbjct: 5 GVNKVILIGNLGHDPEIRYMPNGGAVANITLATSETWRDKQTGESREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ V+ +L + ++L GS +Y+EG+L+ + + D +G R E+ + NG + LG
Sbjct: 57 RI-VFFGKLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNMNGTMHMLG 114
>gi|393784649|ref|ZP_10372811.1| single-stranded DNA-binding protein [Bacteroides salyersiae
CL02T12C01]
gi|392665184|gb|EIY58714.1| single-stranded DNA-binding protein [Bacteroides salyersiae
CL02T12C01]
Length = 154
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K SG V FSL T R N T+ R +WH +
Sbjct: 5 KVILLGNVGQDPKVKYFDSGSAVATFSLAT-----TDRAYTLANGTQVPERT--EWHNI- 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V R +V K+L G +YVEG L + + D G R + E+ +
Sbjct: 57 VASNRWAEIVDKYLHKGDKLYVEGKLRTRTYTDQ-AGATRYVTEVYV 102
>gi|299768442|ref|YP_003730468.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter oleivorans DR1]
gi|298698530|gb|ADI89095.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter oleivorans DR1]
Length = 196
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|258626996|ref|ZP_05721794.1| single-strand binding protein [Vibrio mimicus VM603]
gi|449143839|ref|ZP_21774660.1| ssDNA-binding protein [Vibrio mimicus CAIM 602]
gi|258580670|gb|EEW05621.1| single-strand binding protein [Vibrio mimicus VM603]
gi|449080494|gb|EMB51407.1| ssDNA-binding protein [Vibrio mimicus CAIM 602]
Length = 177
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D G R E+ ++ NG + L
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|41056962|ref|NP_957582.1| single-stranded DNA-binding protein [Escherichia coli]
gi|219586069|ref|YP_002456163.1| single-stranded DNA-binding protein [Escherichia coli]
gi|256367678|ref|YP_003108247.1| single-strand binding protein [Escherichia coli]
gi|410610048|ref|YP_006954254.1| Ssb [Escherichia coli]
gi|410683162|ref|YP_006940232.1| single-stranded DNA binding protein ssb [Escherichia coli F18+]
gi|452909621|ref|NP_052922.3| single strand DNA binding protein [Shigella flexneri 2b]
gi|5103190|dbj|BAA78826.1| single strand DNA binding protein [Shigella flexneri 2b]
gi|38606099|gb|AAR25063.1| ssb [Escherichia coli]
gi|218931652|gb|ACL12425.1| single-strand binding protein [Escherichia coli]
gi|228480615|gb|ACQ41943.1| single-strand binding protein [Escherichia coli]
gi|356598389|gb|AET14904.1| single-stranded DNA binding protein ssb [Escherichia coli F18+]
gi|391324382|gb|AFM38928.1| Ssb [Escherichia coli]
Length = 188
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
>gi|85715496|ref|ZP_01046477.1| single-strand DNA-binding protein [Nitrobacter sp. Nb-311A]
gi|85697691|gb|EAQ35567.1| single-strand DNA-binding protein [Nitrobacter sp. Nb-311A]
Length = 163
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDRTSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L VV ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVVEQYLKKGSKVYIEGQLQTRKWTD 91
>gi|422832090|ref|ZP_16880214.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|371615693|gb|EHO04086.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
Length = 175
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQMLG 113
>gi|317046541|ref|YP_004114189.1| ssDNA-binding protein [Pantoea sp. At-9b]
gi|316948158|gb|ADU67633.1| single-strand binding protein [Pantoea sp. At-9b]
Length = 182
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G R EI + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQERYTTEIVVNVGGTMQMLG 114
>gi|256855323|ref|YP_003162567.1| single-stranded binding protein Ssb [Escherichia coli]
gi|256275535|gb|ACU68808.1| single-stranded binding protein Ssb [Escherichia coli]
Length = 193
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|417642653|ref|ZP_12292755.1| plasmid-derived single-stranded DNA-binding protein domain protein,
partial [Escherichia coli TX1999]
gi|345386087|gb|EGX15923.1| plasmid-derived single-stranded DNA-binding protein domain protein
[Escherichia coli TX1999]
Length = 119
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|417164355|ref|ZP_11999160.1| single-stranded DNA-binding protein [Escherichia coli 99.0741]
gi|417238845|ref|ZP_12036269.1| single-stranded DNA-binding protein [Escherichia coli 9.0111]
gi|417614538|ref|ZP_12264993.1| single-stranded DNA-binding protein [Escherichia coli STEC_EH250]
gi|432620078|ref|ZP_19856139.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
gi|345360384|gb|EGW92553.1| single-stranded DNA-binding protein [Escherichia coli STEC_EH250]
gi|386172618|gb|EIH44641.1| single-stranded DNA-binding protein [Escherichia coli 99.0741]
gi|386213382|gb|EII23811.1| single-stranded DNA-binding protein [Escherichia coli 9.0111]
gi|431145607|gb|ELE47223.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
Length = 186
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GVNKVILIGHLGQDPEIRYFPNGGGAVANLTLATTDTWRDKQSGEMKEHTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV +Y +L + ++L GS +Y+EG L + + D G+ R E+ + NG L L
Sbjct: 57 HRVVIYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWFDQQNGVDRYSTEVVVSVNGTLQML 115
Query: 199 G----------------KGGDAQPPSPSE 211
G +GG QPP ++
Sbjct: 116 GSPRQQQGGGNVSSAPAQGGWGQPPQNAQ 144
>gi|121998963|ref|YP_001003750.1| ssDNA-binding protein [Halorhodospira halophila SL1]
gi|121590368|gb|ABM62948.1| single-strand binding protein [Halorhodospira halophila SL1]
Length = 160
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G+ P + SG V +L T +R+ E + TE WH
Sbjct: 5 GVNKVILIGNLGRDPEVRYTASGSAVANVALATSDTWRDRQTGEQQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV ++ RLG + ++L GS +Y+EG L+ + + D
Sbjct: 57 RVVMF-NRLGEIAGEYLRKGSKVYIEGRLQTRKWQD 91
>gi|58581062|ref|YP_200078.1| single-stranded DNA-binding protein [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|84622980|ref|YP_450352.1| single-stranded DNA-binding protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|58425656|gb|AAW74693.1| single-stranded DNA binding protein [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|84366920|dbj|BAE68078.1| single-stranded DNA binding protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 178
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|300023690|ref|YP_003756301.1| single-strand binding protein [Hyphomicrobium denitrificans ATCC
51888]
gi|299525511|gb|ADJ23980.1| single-strand binding protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 173
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG VG+ P ++ + GR + SL T +++ E + TE WHR
Sbjct: 5 VNKVILVGNVGKDPEIRRTQDGRPIANLSLATSETWRDKQTGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L VV +++ G+ +Y+EG L+ + + D
Sbjct: 57 VVIFSEPLCKVVEQYVKKGAKLYIEGALQTRKWTD 91
>gi|421604143|ref|ZP_16046387.1| single-stranded DNA-binding protein [Bradyrhizobium sp. CCGE-LA001]
gi|404263748|gb|EJZ29184.1| single-stranded DNA-binding protein [Bradyrhizobium sp. CCGE-LA001]
Length = 164
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L +V ++L G+ +Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFSEPLCKIVEQYLKKGAKVYIEGALQTRKYTDQ-SGVEKYSTEVVLQ 105
>gi|431932249|ref|YP_007245295.1| single stranded DNA-binding protein [Thioflavicoccus mobilis 8321]
gi|431830552|gb|AGA91665.1| single stranded DNA-binding protein [Thioflavicoccus mobilis 8321]
Length = 176
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P + +SG V L T +R E++ TE WHR
Sbjct: 6 VNKVILIGNLGADPEVRYTQSGSAVANVRLATSEQWRDRNTGESQERTE--------WHR 57
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL-- 198
V V+ +L +V ++L GS IYVEG L+ + + D G R E+ + NG + L
Sbjct: 58 V-VFFGKLAEIVQQYLRKGSKIYVEGKLQTRKWQDQ-NGQDRYNTEVVVDINGTMQMLDS 115
Query: 199 --GKGG-----DAQPPSPS 210
G GG D PP+ S
Sbjct: 116 RSGGGGASVPFDDGPPAQS 134
>gi|395787563|ref|ZP_10467162.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
gi|395411078|gb|EJF77613.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
Length = 172
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++ G L L G+
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQKYRGELQMLDGR 117
Query: 201 GG 202
GG
Sbjct: 118 GG 119
>gi|296535352|ref|ZP_06897553.1| single-strand binding protein [Roseomonas cervicalis ATCC 49957]
gi|296264320|gb|EFH10744.1| single-strand binding protein [Roseomonas cervicalis ATCC 49957]
Length = 182
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G V L T +R E +WH
Sbjct: 5 VNKVILIGNLGKDPEVRNFQNGGRVVNLRLATTDTYKDREGNRQER---------TEWHS 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V+++ E+LG + K+L GS +Y+EG LE + + D G R E+ +R G L L
Sbjct: 56 VAIFNEKLGEIAEKYLRKGSKVYIEGKLETRKWQDQ-AGQDRYSTEVVLRNFGGELTLL 113
>gi|229592872|ref|YP_002874991.1| single-stranded DNA-binding protein [Pseudomonas fluorescens SBW25]
gi|229364738|emb|CAY52715.1| single-strand binding protein [Pseudomonas fluorescens SBW25]
Length = 171
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|417852657|ref|ZP_12498173.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338216470|gb|EGP02560.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 150
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K I+VG +GQ P K + +G VT S+ T + ++ E R V+W
Sbjct: 2 AGVNKVIIVGNLGQDPDHKVMTNGNPVTNISVATSEVWADKASGE--------KREVVEW 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
HR+++Y +R + + L GS +Y+EG L + + D
Sbjct: 54 HRITLY-QRQADIAAQFLKKGSKVYIEGRLRTRKWQD 89
>gi|262164151|ref|ZP_06031890.1| single-stranded DNA-binding protein [Vibrio mimicus VM223]
gi|262172511|ref|ZP_06040189.1| single-stranded DNA-binding protein [Vibrio mimicus MB-451]
gi|261893587|gb|EEY39573.1| single-stranded DNA-binding protein [Vibrio mimicus MB-451]
gi|262027679|gb|EEY46345.1| single-stranded DNA-binding protein [Vibrio mimicus VM223]
Length = 177
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D G R E+ ++ NG + L
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|424497190|ref|ZP_17944614.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|390818432|gb|EIO84813.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
Length = 175
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|21674759|ref|NP_662824.1| single-strand binding protein [Chlorobium tepidum TLS]
gi|37999707|sp|Q8KB47.1|SSB1_CHLTE RecName: Full=Single-stranded DNA-binding protein 1; Short=SSB 1;
AltName: Full=Helix-destabilizing protein 1
gi|21647972|gb|AAM73166.1| single-strand binding protein [Chlorobium tepidum TLS]
Length = 162
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG-GIRNNRRPLENENPTEYANRCAVQW 138
G+ K +L+G +G P +++ SG++V F+L T G +++ L+ +W
Sbjct: 4 GLNKVMLIGHLGNDPERRETASGQSVVNFTLATSEGFKDSSGNLQER----------TEW 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HR+ + +L + ++L G +Y+EG L+ + ++D TG + EI L
Sbjct: 54 HRIVAWG-KLADICSQYLKKGRQVYIEGRLQTRSWDDNKTGDKKYATEIVCTDMQMLGAK 112
Query: 199 GKGGDAQPPSPSEVR 213
GG S S+ R
Sbjct: 113 DSGGGTSDASYSQNR 127
>gi|421827686|ref|ZP_16263021.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|408074044|gb|EKH08342.1| single-stranded DNA-binding protein [Escherichia coli PA7]
Length = 155
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|388457563|ref|ZP_10139858.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Fluoribacter dumoffii Tex-KL]
Length = 156
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VG P + L +G VT S+ T ++ E + TE WH
Sbjct: 4 GINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSEAWKDKATGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYVRKGSKLYVEGSLRTRKWQD 90
>gi|390989942|ref|ZP_10260235.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372555386|emb|CCF67210.1| single-stranded DNA-binding protein [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 178
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRVSLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|410652456|ref|YP_006955738.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|410654228|ref|YP_006957806.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|425221460|ref|ZP_18616377.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|432725481|ref|ZP_19960390.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE17]
gi|432969395|ref|ZP_20158304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE203]
gi|365819286|gb|AEX01075.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|407809955|gb|AFU34764.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|408155920|gb|EKH84160.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|431261448|gb|ELF53484.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE17]
gi|431467430|gb|ELH47439.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE203]
Length = 175
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLCKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|387895896|ref|YP_006326193.1| single-strand DNA-binding protein [Pseudomonas fluorescens A506]
gi|408479257|ref|ZP_11185476.1| single-strand DNA-binding protein [Pseudomonas sp. R81]
gi|440737886|ref|ZP_20917437.1| single-strand DNA-binding protein [Pseudomonas fluorescens
BRIP34879]
gi|447918563|ref|YP_007399131.1| single-strand DNA-binding protein [Pseudomonas poae RE*1-1-14]
gi|387161098|gb|AFJ56297.1| single-strand DNA-binding protein [Pseudomonas fluorescens A506]
gi|440381625|gb|ELQ18151.1| single-strand DNA-binding protein [Pseudomonas fluorescens
BRIP34879]
gi|445202426|gb|AGE27635.1| single-strand DNA-binding protein [Pseudomonas poae RE*1-1-14]
Length = 171
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|336248196|ref|YP_004591906.1| single-stranded DNA-binding protein [Enterobacter aerogenes KCTC
2190]
gi|444353688|ref|YP_007389832.1| Single-stranded DNA-binding protein [Enterobacter aerogenes
EA1509E]
gi|334734252|gb|AEG96627.1| single-stranded DNA-binding protein [Enterobacter aerogenes KCTC
2190]
gi|443904518|emb|CCG32292.1| Single-stranded DNA-binding protein [Enterobacter aerogenes
EA1509E]
Length = 174
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L + + D +G + EI + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEIVVNVGGTMQML 113
>gi|312963339|ref|ZP_07777822.1| single-strand DNA-binding protein [Pseudomonas fluorescens WH6]
gi|311282419|gb|EFQ61017.1| single-strand DNA-binding protein [Pseudomonas fluorescens WH6]
Length = 171
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|430376136|ref|ZP_19430539.1| single-strand binding protein [Moraxella macacae 0408225]
gi|429541367|gb|ELA09395.1| single-strand binding protein [Moraxella macacae 0408225]
Length = 264
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG++G PV ++ +G VT S+ T +++ + R A +WH
Sbjct: 3 GVNKVIIVGRLGNDPVTRQFANGGNVTNISVATSEQWTDKQTGD--------RREATEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RVS + +L + +L GS +YVEG+L + D G+ R +I
Sbjct: 55 RVSFFG-KLADIAANYLKKGSAVYVEGSLRTSKYTDQ-NGIERYATDI 100
>gi|308188967|ref|YP_003933098.1| single-stranded DNA-binding protein [Pantoea vagans C9-1]
gi|308059477|gb|ADO11649.1| Single-stranded DNA-binding protein [Pantoea vagans C9-1]
Length = 179
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLKKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQMLG 114
>gi|163851666|ref|YP_001639709.1| single-strand binding protein [Methylobacterium extorquens PA1]
gi|218530472|ref|YP_002421288.1| single-strand binding protein [Methylobacterium extorquens CM4]
gi|163663271|gb|ABY30638.1| single-strand binding protein [Methylobacterium extorquens PA1]
gi|218522775|gb|ACK83360.1| single-strand binding protein [Methylobacterium extorquens CM4]
Length = 189
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V +Y + L V ++L GS +Y+EG L+ + + D +G + E+ ++R G + L
Sbjct: 57 VVIYNDNLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQRFRGEMTIL 114
>gi|227553|prf||1706408A ssDNA binding protein
Length = 174
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 4 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 56 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGTMQMLG 112
>gi|419882785|ref|ZP_14403976.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9545]
gi|388360529|gb|EIL24720.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9545]
Length = 215
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 45 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 96
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 97 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 153
>gi|386616991|ref|YP_006136657.1| single-stranded DNA-binding protein [Escherichia coli UMNK88]
gi|332346160|gb|AEE59494.1| single-stranded DNA-binding protein [Escherichia coli UMNK88]
Length = 178
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GINKVILIGHLGQDPELRYFPNGGGAVANLTLATSESWRDKQSGEMKEQTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV ++ +L + ++L GS +Y+EG L+ + + D G+ R E+ + NG L L
Sbjct: 57 HRVVIFG-KLAEIAGEYLRKGSQVYIEGQLKTRKWFDQQNGVDRYATEVVVSVNGTLQML 115
Query: 199 G 199
G
Sbjct: 116 G 116
>gi|157372339|ref|YP_001480328.1| single-strand binding protein [Serratia proteamaculans 568]
gi|157324103|gb|ABV43200.1| single-strand binding protein [Serratia proteamaculans 568]
Length = 181
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 12/132 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G+ + EI + G L L
Sbjct: 57 RVVLFG-KLAEIAGEYLRKGSQVYIEGFLQTRKWTDQ-AGVEKYTTEIVVNIGGTLQML- 113
Query: 200 KGGDAQPPSPSE 211
GG +QP + +
Sbjct: 114 -GGRSQPANAGQ 124
>gi|77461270|ref|YP_350777.1| single-stranded DNA-binding protein [Pseudomonas fluorescens Pf0-1]
gi|398977374|ref|ZP_10687091.1| single stranded DNA-binding protein [Pseudomonas sp. GM25]
gi|424925174|ref|ZP_18348535.1| Ssb [Pseudomonas fluorescens R124]
gi|77385273|gb|ABA76786.1| single-strand binding protein [Pseudomonas fluorescens Pf0-1]
gi|398138118|gb|EJM27148.1| single stranded DNA-binding protein [Pseudomonas sp. GM25]
gi|404306334|gb|EJZ60296.1| Ssb [Pseudomonas fluorescens R124]
Length = 172
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|402759012|ref|ZP_10861268.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. NCTC 7422]
Length = 198
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWMDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|426228127|ref|XP_004008166.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial [Ovis
aries]
Length = 148
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ +TV +FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKKTVRIFSLATNEMW---RSGENETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|399070072|ref|ZP_10749641.1| single stranded DNA-binding protein [Caulobacter sp. AP07]
gi|398044626|gb|EJL37434.1| single stranded DNA-binding protein [Caulobacter sp. AP07]
Length = 168
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V L T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRTLSSGDRVANLRLATSETWRDRTSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ + L V +L GST+Y+EG ++ + + D +G+ + EI +++ G L L
Sbjct: 57 VVIFNDNLVKVAESYLRKGSTVYIEGAIQTRKWADQ-SGVEKYSTEIVLQKFRGELTML 114
>gi|339485418|ref|YP_004699946.1| single-stranded DNA-binding protein [Pseudomonas putida S16]
gi|431800538|ref|YP_007227441.1| single-stranded DNA-binding protein [Pseudomonas putida HB3267]
gi|338836261|gb|AEJ11066.1| single-stranded DNA-binding protein [Pseudomonas putida S16]
gi|430791303|gb|AGA71498.1| single-stranded DNA-binding protein [Pseudomonas putida HB3267]
Length = 180
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NG + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDINGTMQLLG 112
Query: 200 -------KGGD 203
+GGD
Sbjct: 113 GRPQNQQQGGD 123
>gi|443731424|gb|ELU16561.1| hypothetical protein CAPTEDRAFT_121698 [Capitella teleta]
Length = 181
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 16/139 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + G V SL T ++ + + TE WH
Sbjct: 4 GINKVILIGNLGDDPDVRFTGQGAAVANLSLATSEAWKDKNTGQQQEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV ++ +L + ++L GS +Y+EG L+ + + D G R E+ + NG+L L
Sbjct: 56 RVVIFG-KLAEIAQQYLNKGSKVYIEGKLQTRKWQDK-DGQDRYTTEVVVDPFNGQLQML 113
Query: 199 -----GKGGDAQPPSPSEV 212
G GDA+ +E
Sbjct: 114 DSAGGGNSGDARAAQQAEA 132
>gi|395780293|ref|ZP_10460758.1| single-strand binding protein [Bartonella washoensis 085-0475]
gi|395419017|gb|EJF85326.1| single-strand binding protein [Bartonella washoensis 085-0475]
Length = 150
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G P K + SG V F + T +++ + TE WH V
Sbjct: 4 KVTLIGRLGADPESKTMTSGAEVVNFRMATSENYTDKKTNQKIEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G EI + + G L L K
Sbjct: 56 VFNPHLAKIALQYLSKGSKVYIEGKLQTRKWKDK-NGSEHSSTEIVLPQFKGELYLLDSK 114
Query: 201 GGDAQPPSPSEVRGAGY 217
P+PS V Y
Sbjct: 115 KNQPASPAPSSVTTKSY 131
>gi|417241971|ref|ZP_12037633.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 9.0111]
gi|417665165|ref|ZP_12314737.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_O31]
gi|386211829|gb|EII22281.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 9.0111]
gi|397787258|gb|EJK98084.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_O31]
Length = 173
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|71728618|gb|EAO30769.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 148
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 17/138 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITNISLATSSKRKDREGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREIAIRRNGRLVF 197
RV + +LG + ++L GS Y+EG + F ND G R + EI + L
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGTIRYDKFTGND---GQDRYVTEIIADQMHMLGG 110
Query: 198 LGKGGDAQPPS--PSEVR 213
G+G P P++VR
Sbjct: 111 RGEGSSGITPQRRPAKVR 128
>gi|347735637|ref|ZP_08868470.1| single stranded DNA-binding protein [Azospirillum amazonense Y2]
gi|346921093|gb|EGY01932.1| single stranded DNA-binding protein [Azospirillum amazonense Y2]
Length = 206
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 9/108 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + +++G V + T +R E + T QWH+V
Sbjct: 24 KVILIGNLGKEPEVRSMQNGGKVCNLRIATSETWKDRNSGERQERT--------QWHQVV 75
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
++ E L GV + L GS +Y+EG LE + + D +G + E+ +R
Sbjct: 76 IFNEALIGVAERFLKKGSKVYIEGQLETRKWTDQ-SGQEKYTTEVVLR 122
>gi|422890436|ref|ZP_16932862.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-40A1]
gi|341627798|gb|EGS53094.1| single-stranded DNA-binding protein [Vibrio cholerae HC-40A1]
Length = 168
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|271501962|ref|YP_003334988.1| single-strand-binding protein [Dickeya dadantii Ech586]
gi|270345517|gb|ACZ78282.1| single-strand binding protein [Dickeya dadantii Ech586]
Length = 182
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV++Y +L + ++L GS +Y+EG L + + D G R E+ + +G + LG
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVVDISGSMQMLG 114
>gi|295698774|ref|YP_003603429.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|295698775|ref|YP_003603430.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|291157043|gb|ADD79488.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|291157389|gb|ADD79834.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
Length = 161
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V SL T +++ E TE WH
Sbjct: 5 GINKVILIGYLGQDPEIRYMPNGNAVANLSLATSENWKDKQTGEMRERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V +HL GS +Y+EG+L+ + + D G R E+ + G + LG
Sbjct: 57 RVVIFG-KLAEVSGEHLRKGSQVYIEGSLQTRKWQDQ-NGQDRYNTEVIVNIGGTMRMLG 114
>gi|71725314|ref|YP_272300.1| single-strand DNA-binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558904|gb|AAZ38113.1| single-strand binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 188
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG GQ P + + + VT SL T +++ + TE WH
Sbjct: 4 GINKVILVGTCGQDPEVRYMPNSTAVTNLSLATSEQWTDKQSGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KIAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYSTEIVVDMQGTMQLLG 112
>gi|365921047|ref|ZP_09445347.1| single-strand binding family protein [Cardiobacterium valvarum
F0432]
gi|364576835|gb|EHM54134.1| single-strand binding family protein [Cardiobacterium valvarum
F0432]
Length = 186
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 10/124 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G +G P + + SG V S+ T N+R E TE WH
Sbjct: 3 GVNKVIIIGNLGNDPDMRYMPSGEAVANLSIATSETWNDRNTGEKREKTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV + +L ++ ++ GS IY+EG L+ + + D +G R EI + L
Sbjct: 55 RVVAF-RKLAEIIGQYCKKGSKIYIEGKLQTRKWTDQ-SGQNRYTTEIIADQMQMLDSRN 112
Query: 200 KGGD 203
GGD
Sbjct: 113 SGGD 116
>gi|325914687|ref|ZP_08177028.1| single-strand binding protein [Xanthomonas vesicatoria ATCC 35937]
gi|325539189|gb|EGD10844.1| single-strand binding protein [Xanthomonas vesicatoria ATCC 35937]
Length = 202
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R +R + N+ +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRISLATTSMRKDR---------DGNNQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS +YVEG L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSQVYVEGEL 82
>gi|429768760|ref|ZP_19300895.1| single-strand binding family protein [Brevundimonas diminuta 470-4]
gi|429188643|gb|EKY29517.1| single-strand binding family protein [Brevundimonas diminuta 470-4]
Length = 164
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + L +G V + T ++ E + TE WH
Sbjct: 5 VNKVILIGNLGRDPEIRSLNNGDRVANLRIATSETWRDKSTGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ + + V +L GST+Y+EG+L+ + + D G+ + EI I+R NG+L L
Sbjct: 57 VVIFNDNIVKVAENYLKKGSTVYIEGSLQTRKWTDQ-QGVEKYSTEIVIQRFNGQLTML 114
>gi|304398454|ref|ZP_07380327.1| single-strand binding protein [Pantoea sp. aB]
gi|440761190|ref|ZP_20940282.1| Single-stranded DNA-binding protein [Pantoea agglomerans 299R]
gi|304353959|gb|EFM18333.1| single-strand binding protein [Pantoea sp. aB]
gi|436425120|gb|ELP22865.1| Single-stranded DNA-binding protein [Pantoea agglomerans 299R]
Length = 183
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLKKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQMLG 114
>gi|419902990|ref|ZP_14422131.1| single-stranded DNA-binding protein, partial [Escherichia coli
O26:H11 str. CVM9942]
gi|388372932|gb|EIL36306.1| single-stranded DNA-binding protein, partial [Escherichia coli
O26:H11 str. CVM9942]
Length = 144
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|300900997|ref|ZP_07119119.1| single-strand binding family protein, partial [Escherichia coli MS
198-1]
gi|300355542|gb|EFJ71412.1| single-strand binding family protein [Escherichia coli MS 198-1]
Length = 193
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 23 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 74
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 75 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 131
>gi|191173636|ref|ZP_03035161.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli F11]
gi|281427966|ref|YP_003352477.1| single-stranded DNA binding protein [Escherichia coli SE15]
gi|293404623|ref|ZP_06648616.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|386602563|ref|YP_006104071.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|422757393|ref|ZP_16811212.1| single-strand binding protein [Escherichia coli H263]
gi|422842042|ref|ZP_16890009.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|432351095|ref|ZP_19594413.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE2]
gi|432391323|ref|ZP_19634176.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE21]
gi|432424699|ref|ZP_19667223.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE181]
gi|432462094|ref|ZP_19704234.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE204]
gi|432464107|ref|ZP_19706221.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE205]
gi|432497974|ref|ZP_19739760.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|432517117|ref|ZP_19754316.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE228]
gi|432536460|ref|ZP_19773389.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE235]
gi|432572158|ref|ZP_19808651.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE55]
gi|432581514|ref|ZP_19817929.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE57]
gi|432585680|ref|ZP_19822059.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|432629661|ref|ZP_19865619.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE80]
gi|432639235|ref|ZP_19875086.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE83]
gi|432663494|ref|ZP_19899104.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE116]
gi|432692966|ref|ZP_19928184.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE162]
gi|432706775|ref|ZP_19941857.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE6]
gi|432712891|ref|ZP_19947935.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE8]
gi|432730291|ref|ZP_19965157.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE45]
gi|432734795|ref|ZP_19969611.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE42]
gi|432757954|ref|ZP_19992480.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE46]
gi|432818444|ref|ZP_20052166.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|432818450|ref|ZP_20052172.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|433002517|ref|ZP_20191027.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE227]
gi|433056068|ref|ZP_20243195.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE122]
gi|433070984|ref|ZP_20257710.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE128]
gi|433076077|ref|ZP_20262670.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE129]
gi|433109014|ref|ZP_20294912.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
gi|433156776|ref|ZP_20341675.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE176]
gi|433160706|ref|ZP_20345525.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE177]
gi|433181389|ref|ZP_20365721.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE82]
gi|433201186|ref|ZP_20385041.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|433332273|ref|ZP_20404529.1| single-stranded DNA-binding protein [Escherichia coli J96]
gi|190906116|gb|EDV65730.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli F11]
gi|281181698|dbj|BAI58027.1| single-stranded DNA binding protein [Escherichia coli SE15]
gi|291428335|gb|EFF01361.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|307629832|gb|ADN74135.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|323954204|gb|EGB49993.1| single-strand binding protein [Escherichia coli H263]
gi|371602591|gb|EHN91282.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|430882225|gb|ELC05426.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE2]
gi|430921052|gb|ELC41909.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE21]
gi|430959509|gb|ELC77827.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE181]
gi|430987500|gb|ELD04037.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE204]
gi|430998070|gb|ELD14318.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE205]
gi|431034368|gb|ELD46307.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|431053178|gb|ELD62812.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE228]
gi|431073701|gb|ELD81342.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE235]
gi|431111608|gb|ELE15505.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE55]
gi|431122835|gb|ELE25591.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE57]
gi|431125590|gb|ELE27991.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|431175436|gb|ELE75445.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE80]
gi|431185887|gb|ELE85572.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE83]
gi|431206335|gb|ELF04748.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE116]
gi|431237718|gb|ELF32708.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE162]
gi|431257059|gb|ELF49984.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE6]
gi|431258230|gb|ELF51012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE8]
gi|431279795|gb|ELF70743.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE45]
gi|431290838|gb|ELF81368.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE42]
gi|431312580|gb|ELG00578.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE46]
gi|431373485|gb|ELG59089.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|431373491|gb|ELG59095.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|431522543|gb|ELH99777.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE227]
gi|431562761|gb|ELI36006.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE122]
gi|431576235|gb|ELI48930.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE128]
gi|431577737|gb|ELI50366.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE129]
gi|431618085|gb|ELI87066.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
gi|431667219|gb|ELJ33810.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE176]
gi|431673981|gb|ELJ40167.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE177]
gi|431694983|gb|ELJ60322.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE82]
gi|431714122|gb|ELJ78322.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|432343935|gb|ELL38743.1| single-stranded DNA-binding protein [Escherichia coli J96]
Length = 175
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|85372866|ref|YP_456928.1| single-strand binding protein [Erythrobacter litoralis HTCC2594]
gi|84785949|gb|ABC62131.1| single-strand binding protein [Erythrobacter litoralis HTCC2594]
Length = 176
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +GQ P + ++G V + T +R E + TE WH V+
Sbjct: 7 KVMLIGNLGQDPEVRSFQNGGKVCNLRIATSETWKDRNSGERQERTE--------WHTVA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
++ E L V ++L GS +Y+EG L+ + + D +G R E+ +R NG L L
Sbjct: 59 IFSEGLVNVAERYLKKGSKVYIEGQLQTRKWQDQ-SGNDRYSTEVVLRGYNGTLTML 114
>gi|15838245|ref|NP_298933.1| single-stranded DNA-binding protein [Xylella fastidiosa 9a5c]
gi|9106701|gb|AAF84453.1|AE003991_5 single-stranded DNA binding protein [Xylella fastidiosa 9a5c]
Length = 151
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 4 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGDTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F ND G R + EI
Sbjct: 55 RVKFFG-KLGEIAAEYLHKGSQCYIEGAIRYDKFTGND---GQERYVTEI 100
>gi|443534094|ref|ZP_21100015.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-80A1]
gi|443462738|gb|ELT33768.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-80A1]
Length = 162
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|422321462|ref|ZP_16402509.1| single-stranded DNA-binding protein [Achromobacter xylosoxidans
C54]
gi|317403631|gb|EFV84119.1| single-stranded DNA-binding protein [Achromobacter xylosoxidans
C54]
Length = 151
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
P + K ILVG +G++P + G V S+ T +R E TE W
Sbjct: 2 PSVNKVILVGNLGRNPDIRYSPDGAAVCSMSIATTSTWKDRASGERREETE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
HRV +Y RL + ++L G ++Y+EG L+ + + D TG R EI
Sbjct: 54 HRVVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGGDRYSTEI 101
>gi|270208475|ref|YP_003329249.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|348589228|ref|YP_004870031.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410592420|ref|YP_006952217.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609342|ref|YP_006953301.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609442|ref|YP_006953400.1| single-stranded DNA-binding protein [Escherichia coli]
gi|218546511|gb|ACK98900.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|301333124|gb|ADK71071.1| single-stranded DNA-binding protein [Escherichia coli]
gi|346987312|gb|AEO51454.1| single-stranded DNA-binding protein [Escherichia coli]
gi|346987412|gb|AEO51553.1| single-stranded DNA-binding protein [Escherichia coli]
gi|347550326|gb|AEP03723.1| single-stranded DNA-binding protein [Escherichia coli]
Length = 173
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|260773657|ref|ZP_05882573.1| single-stranded DNA-binding protein [Vibrio metschnikovii CIP
69.14]
gi|260612796|gb|EEX37999.1| single-stranded DNA-binding protein [Vibrio metschnikovii CIP
69.14]
Length = 172
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V +L T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGADPEVRYMASGAAVANITLATSESWRDKTTGEQRERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVALYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQGYNGIMQML 114
Query: 199 GKGGDAQPPSPSE 211
GG Q +P +
Sbjct: 115 --GGRQQGAAPGQ 125
>gi|331660280|ref|ZP_08361215.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA206]
gi|331052547|gb|EGI24583.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA206]
Length = 176
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + ++D G+ R I EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKTTGTMQMLG 114
>gi|168759021|ref|ZP_02784028.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4401]
gi|168770718|ref|ZP_02795725.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4486]
gi|422335326|ref|ZP_16416326.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4_1_47FAA]
gi|424572667|ref|ZP_18013164.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|425414295|ref|ZP_18796016.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|189354294|gb|EDU72713.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4401]
gi|189360447|gb|EDU78866.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4486]
gi|373243664|gb|EHP63165.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4_1_47FAA]
gi|390889838|gb|EIP49544.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|408351898|gb|EKJ65582.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
Length = 175
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 K 200
+
Sbjct: 114 R 114
>gi|418528298|ref|ZP_13094248.1| single-strand binding protein [Comamonas testosteroni ATCC 11996]
gi|371454674|gb|EHN67676.1| single-strand binding protein [Comamonas testosteroni ATCC 11996]
Length = 182
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN R A +WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGEN--------REATEWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ +L +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGKLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|385233085|ref|YP_005794427.1| ssDNA-binding protein [Ketogulonicigenium vulgare WSH-001]
gi|343461996|gb|AEM40431.1| Single-stranded DNA-binding protein [Ketogulonicigenium vulgare
WSH-001]
Length = 195
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +G V + T +R E + TE WH
Sbjct: 25 VNKVILIGNLGRDPEVRSFPNGGKVVNLRIATSETWRDRNSGERKERTE--------WHS 76
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E LG + K+L GS +Y+EG LE + + D G R E+ +R
Sbjct: 77 VAIFSEPLGNIAEKYLRKGSKVYLEGQLETRKWQDQ-AGADRYSTEVVLR 125
>gi|338708541|ref|YP_004662742.1| single-strand binding protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336295345|gb|AEI38452.1| single-strand binding protein [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 185
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P K +G + + T +R E TE WH
Sbjct: 5 VNKVIILGNLGRDPEIKTFSNGNRMANLRIATSETWRDRNTGERREKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
VS++ E L VV ++L GS +Y+EG L+ + + D +G R EI ++ NG+LV L
Sbjct: 57 VSIFSEGLVKVVEQYLRKGSKVYIEGQLQTRKWQDQ-SGQDRYTTEIILQGFNGQLVML 114
>gi|372275604|ref|ZP_09511640.1| single-stranded DNA-binding protein [Pantoea sp. SL1_M5]
gi|390437567|ref|ZP_10226105.1| single-stranded DNA-binding protein [Pantoea agglomerans IG1]
Length = 187
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + G + LG
Sbjct: 57 RVVLF-GKLAEVAGEYLKKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQMLG 114
>gi|332560220|ref|ZP_08414542.1| single-stranded DNA-binding protein [Rhodobacter sphaeroides WS8N]
gi|332277932|gb|EGJ23247.1| single-stranded DNA-binding protein [Rhodobacter sphaeroides WS8N]
Length = 173
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GST+Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|193214794|ref|YP_001995993.1| single-strand binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088271|gb|ACF13546.1| single-strand binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 174
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K +L+G +G P + +G +V FSL T E+ + R +WH
Sbjct: 4 GLNKVMLIGNLGTDPDLRVTPNGHSVANFSLATN---------ESFKDSTGEFRERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ V+ +L + ++L G +Y+EG L+ + ++D +G R + EI LV LG
Sbjct: 55 RIVVW-GKLADISKQYLRKGKQVYIEGKLQTRSWDDQKSGEKRYMTEIVCT---ELVMLG 110
Query: 200 KGGDAQPPSPS 210
P PS
Sbjct: 111 SAQGGGMPDPS 121
>gi|404398230|ref|ZP_10989814.1| protein Ssb [Pseudomonas fuscovaginae UPB0736]
Length = 174
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLL 111
>gi|206579111|ref|YP_002241000.1| single-stranded DNA-binding protein [Klebsiella pneumoniae 342]
gi|288937646|ref|YP_003441705.1| single-strand binding protein [Klebsiella variicola At-22]
gi|290512385|ref|ZP_06551752.1| single-stranded DNA-binding protein [Klebsiella sp. 1_1_55]
gi|206568169|gb|ACI09945.1| single-stranded DNA-binding protein [Klebsiella pneumoniae 342]
gi|288892355|gb|ADC60673.1| single-strand binding protein [Klebsiella variicola At-22]
gi|289775380|gb|EFD83381.1| single-stranded DNA-binding protein [Klebsiella sp. 1_1_55]
Length = 175
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQML 113
>gi|423207263|ref|ZP_17193819.1| single-stranded DNA-binding protein [Aeromonas veronii AMC34]
gi|404620330|gb|EKB17227.1| single-stranded DNA-binding protein [Aeromonas veronii AMC34]
Length = 175
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV V+ +L V ++L GS +YVEG L+ + + D +G R E+ +
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQDQ-SGQERYTTEVLV 104
>gi|450202367|ref|ZP_21893397.1| Single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|297592354|gb|ADI47092.1| single-stranded DNA-binding protein [Escherichia coli]
gi|449312345|gb|EMD02609.1| Single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 185
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V SL T +++ E + TE W
Sbjct: 5 GVNKVILIGHLGQDPDIRYFPNGGGAVANLSLATSDTWRDKQSGEMKEVTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV +Y +L V ++L GS +Y+EG L+ + + D G+ R E+ + NG + L
Sbjct: 57 HRVVLYG-KLAEVAGEYLHKGSQVYIEGQLKTRKWFDQQNGVDRYSTEVVVGVNGVMQML 115
Query: 199 G 199
G
Sbjct: 116 G 116
>gi|91977225|ref|YP_569884.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
BisB5]
gi|91683681|gb|ABE39983.1| single-strand binding protein [Rhodopseudomonas palustris BisB5]
Length = 169
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSETWRDRASGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L GS IY+EG L+ + + D
Sbjct: 57 VVIFSEGLCKIAEQYLKKGSKIYLEGQLQTRKWTD 91
>gi|426411749|ref|YP_007031848.1| single-stranded DNA-binding protein [Pseudomonas sp. UW4]
gi|426269966|gb|AFY22043.1| single-stranded DNA-binding protein [Pseudomonas sp. UW4]
Length = 170
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|398948072|ref|ZP_10672552.1| single stranded DNA-binding protein [Pseudomonas sp. GM33]
gi|398161080|gb|EJM49323.1| single stranded DNA-binding protein [Pseudomonas sp. GM33]
Length = 171
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|310815567|ref|YP_003963531.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|308754302|gb|ADO42231.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
Length = 208
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +G V + T +R E + TE WH
Sbjct: 38 VNKVILIGNLGRDPEVRSFPNGGKVVNLRIATSETWRDRNSGERKERTE--------WHS 89
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E LG + K+L GS +Y+EG LE + + D G R E+ +R
Sbjct: 90 VAIFSEPLGNIAEKYLRKGSKVYLEGQLETRKWQDQ-AGADRYSTEVVLR 138
>gi|262280445|ref|ZP_06058229.1| single-stranded DNA-binding protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258223|gb|EEY76957.1| single-stranded DNA-binding protein [Acinetobacter calcoaceticus
RUH2202]
Length = 197
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R+ ++ RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 55 RIVLH-NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|29346907|ref|NP_810410.1| single-strand binding protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|37999425|sp|Q8A7M7.1|SSB_BACTN RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|29338805|gb|AAO76604.1| single-strand binding protein (SSB) [Bacteroides thetaiotaomicron
VPI-5482]
Length = 161
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K +G V F L T R N T+ R +WH +
Sbjct: 5 KVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--EWHNI- 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGG 202
V RL +V K++ G +Y+EG + + ++D +G +R I EI + L G
Sbjct: 57 VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIFVDNMEMLSPKGANT 115
Query: 203 DAQPPSPS 210
A P PS
Sbjct: 116 GAGAPQPS 123
>gi|398967326|ref|ZP_10681852.1| single stranded DNA-binding protein [Pseudomonas sp. GM30]
gi|398144882|gb|EJM33694.1| single stranded DNA-binding protein [Pseudomonas sp. GM30]
Length = 172
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|294649671|ref|ZP_06727083.1| single-stranded DNA-binding protein (controls activity of RecBCD
nuclease) [Acinetobacter haemolyticus ATCC 19194]
gi|292824450|gb|EFF83241.1| single-stranded DNA-binding protein (controls activity of RecBCD
nuclease) [Acinetobacter haemolyticus ATCC 19194]
Length = 108
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
P + KAIL+G +G+ P K +G +T FS+ T ++ E + TE W
Sbjct: 2 PNVNKAILMGVLGRDPETKNFPNGGIITTFSIATTEQWKDKTTGERKEATE--------W 53
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
HR++ RL + K+L GS Y+EG+L + + D G+ R I E+
Sbjct: 54 HRIAT-SNRLAEIASKYLKKGSKAYIEGSLRTRKWKDQ-NGVDREIVEV 100
>gi|221069787|ref|ZP_03545892.1| single-strand binding protein [Comamonas testosteroni KF-1]
gi|220714810|gb|EED70178.1| single-strand binding protein [Comamonas testosteroni KF-1]
Length = 182
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN R A +WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGEN--------REATEWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ +L +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGKLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|62290017|ref|YP_221810.1| ssDNA-binding protein [Brucella abortus bv. 1 str. 9-941]
gi|82699945|ref|YP_414519.1| single-strand binding protein [Brucella melitensis biovar Abortus
2308]
gi|189024258|ref|YP_001935026.1| ssDNA-binding protein [Brucella abortus S19]
gi|237815526|ref|ZP_04594523.1| single-strand binding protein [Brucella abortus str. 2308 A]
gi|260546571|ref|ZP_05822310.1| single-stranded DNA-binding protein [Brucella abortus NCTC 8038]
gi|260754846|ref|ZP_05867194.1| helix-destabilizing protein [Brucella abortus bv. 6 str. 870]
gi|260758063|ref|ZP_05870411.1| helix-destabilizing protein [Brucella abortus bv. 4 str. 292]
gi|260761887|ref|ZP_05874230.1| helix-destabilizing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260883858|ref|ZP_05895472.1| single-stranded DNA-binding protein [Brucella abortus bv. 9 str.
C68]
gi|297248418|ref|ZP_06932136.1| single-stranded DNA-binding protein [Brucella abortus bv. 5 str.
B3196]
gi|376273165|ref|YP_005151743.1| single-stranded DNA-binding protein [Brucella abortus A13334]
gi|423166793|ref|ZP_17153496.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI435a]
gi|423170833|ref|ZP_17157508.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI474]
gi|423173085|ref|ZP_17159756.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI486]
gi|423178222|ref|ZP_17164866.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI488]
gi|423180263|ref|ZP_17166904.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI010]
gi|423183395|ref|ZP_17170032.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI016]
gi|423185665|ref|ZP_17172279.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI021]
gi|423188801|ref|ZP_17175411.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI259]
gi|88941989|sp|Q2YPX7.1|SSB_BRUA2 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|88941990|sp|P0C118.1|SSB_BRUAB RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|144126|gb|AAA16818.1| single stranded DNA binding protein [Brucella abortus]
gi|62196149|gb|AAX74449.1| single-stranded DNA-binding protein family [Brucella abortus bv. 1
str. 9-941]
gi|82616046|emb|CAJ11082.1| Single-strand binding protein [Brucella melitensis biovar Abortus
2308]
gi|189019830|gb|ACD72552.1| Single-strand binding protein [Brucella abortus S19]
gi|237788824|gb|EEP63035.1| single-strand binding protein [Brucella abortus str. 2308 A]
gi|260095621|gb|EEW79498.1| single-stranded DNA-binding protein [Brucella abortus NCTC 8038]
gi|260668381|gb|EEX55321.1| helix-destabilizing protein [Brucella abortus bv. 4 str. 292]
gi|260672319|gb|EEX59140.1| helix-destabilizing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260674954|gb|EEX61775.1| helix-destabilizing protein [Brucella abortus bv. 6 str. 870]
gi|260873386|gb|EEX80455.1| single-stranded DNA-binding protein [Brucella abortus bv. 9 str.
C68]
gi|297175587|gb|EFH34934.1| single-stranded DNA-binding protein [Brucella abortus bv. 5 str.
B3196]
gi|363400771|gb|AEW17741.1| single-stranded DNA-binding protein [Brucella abortus A13334]
gi|374539411|gb|EHR10915.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI474]
gi|374543024|gb|EHR14508.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI435a]
gi|374543640|gb|EHR15122.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI486]
gi|374545461|gb|EHR16922.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI488]
gi|374548827|gb|EHR20274.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI010]
gi|374549458|gb|EHR20901.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI016]
gi|374558459|gb|EHR29852.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI259]
gi|374559756|gb|EHR31141.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI021]
Length = 168
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
V ++ E L V ++L G+ +Y+EG L+ + + D G R +EI +++
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSKEIVLQK 106
>gi|422908931|ref|ZP_16943586.1| single-stranded DNA-binding protein [Vibrio cholerae HE-09]
gi|424658290|ref|ZP_18095547.1| single-stranded DNA-binding protein [Vibrio cholerae HE-16]
gi|341636423|gb|EGS61119.1| single-stranded DNA-binding protein [Vibrio cholerae HE-09]
gi|408055295|gb|EKG90229.1| single-stranded DNA-binding protein [Vibrio cholerae HE-16]
Length = 177
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D G R +I ++ NG + L
Sbjct: 57 RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTDIVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|423116333|ref|ZP_17104024.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5245]
gi|376378515|gb|EHS91274.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5245]
Length = 178
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYIPNGSAVATLSLATSESWRDKQSGEQKEVTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L + + D G + E+ + G + LG
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGQLRTRKWTDQ-AGQDKYTTEVVVNIGGTMQMLG 114
>gi|424864472|ref|ZP_18288375.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86B]
gi|400759218|gb|EJP73400.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86B]
Length = 146
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + V S+ T ++ E + TE WH
Sbjct: 4 GVNKVILVGNLGQKPEMRYTATQSAVANLSVATTESWKDKETGEMRDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV VY +L +V K+L GS +YVEG L+ + + D +G R EI
Sbjct: 56 RV-VYFGKLAEIVEKYLDKGSKVYVEGKLQTRKWQDK-SGADRWTTEI 101
>gi|256823326|ref|YP_003147289.1| ssDNA-binding protein [Kangiella koreensis DSM 16069]
gi|256796865|gb|ACV27521.1| single-strand binding protein [Kangiella koreensis DSM 16069]
Length = 154
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + GR + +L T ++ + + TE WH
Sbjct: 5 GVNKVILVGNLGKDPEIRYTPDGRAIANLTLATSETWKDKNTGQQQEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ +L + ++L GS +Y EG L+ + + D +G + E+ I NG++ LG
Sbjct: 57 RIVIFG-KLAEIAGEYLKKGSQVYFEGKLQTRKWTDQ-SGQDKYTTEVVIDINGQMQMLG 114
Query: 200 --KGGDA 204
GG+A
Sbjct: 115 GRSGGEA 121
>gi|395778043|ref|ZP_10458556.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|395418352|gb|EJF84679.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
Length = 145
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G +P K + SG V F + T ++ + + TE WH +
Sbjct: 4 KVMLIGHLGANPESKTMPSGGEVVNFRMATSESYTDKATNKRIDKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ + +++L GS +Y+EG L+ + + D G+ R EI + + G L L K
Sbjct: 56 VFNPHFAKIALQYLNKGSKVYIEGQLQTRKWQDK-NGIDRYTTEIILPKYKGELKLLDNK 114
Query: 201 GGDAQPPSPS 210
D Q PS +
Sbjct: 115 NNDDQEPSSA 124
>gi|264680894|ref|YP_003280804.1| single-strand binding protein [Comamonas testosteroni CNB-2]
gi|299530884|ref|ZP_07044298.1| single-strand binding protein [Comamonas testosteroni S44]
gi|262211410|gb|ACY35508.1| single-strand binding protein [Comamonas testosteroni CNB-2]
gi|298721105|gb|EFI62048.1| single-strand binding protein [Comamonas testosteroni S44]
Length = 182
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN R A +WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGEN--------REATEWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ +L +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGKLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|240138833|ref|YP_002963308.1| ssDNA-binding protein [Methylobacterium extorquens AM1]
gi|418061910|ref|ZP_12699738.1| single-strand binding protein [Methylobacterium extorquens DSM
13060]
gi|240008805|gb|ACS40031.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
AM1]
gi|373564543|gb|EHP90644.1| single-strand binding protein [Methylobacterium extorquens DSM
13060]
Length = 189
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V +Y + L V ++L GS +Y+EG L+ + + D +G + E+ ++R G + L
Sbjct: 57 VVIYNDNLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQRFRGEMTIL 114
>gi|452877854|ref|ZP_21955103.1| single-stranded DNA-binding protein, partial [Pseudomonas
aeruginosa VRFPA01]
gi|452185410|gb|EME12428.1| single-stranded DNA-binding protein, partial [Pseudomonas
aeruginosa VRFPA01]
Length = 137
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 12/134 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG P + + +G VT +L T +++ + + TE WH
Sbjct: 4 GVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ RL + ++L GS +YVEG+L + + G R EI + NG + LG
Sbjct: 56 RV-VFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGNMQLLG 113
Query: 200 K--GGDAQPPSPSE 211
GD +P E
Sbjct: 114 GRPSGDDSQRAPRE 127
>gi|283826866|ref|YP_003377737.1| single-stranded DNA-binding protein [Shigella sonnei]
gi|283466758|emb|CBI12425.1| single-stranded DNA-binding protein [Shigella sonnei]
Length = 186
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
>gi|167646841|ref|YP_001684504.1| ssDNA-binding protein [Caulobacter sp. K31]
gi|167349271|gb|ABZ72006.1| single-strand binding protein [Caulobacter sp. K31]
Length = 165
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V L T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRTLSSGDRVANLRLATSESWRDRTSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ + L V +L GST+Y+EG ++ + + D +G+ + EI +++ G L L
Sbjct: 57 VVIFNDNLVKVAESYLRKGSTVYIEGAIQTRKWADA-SGVEKYSTEIVLQKFRGELTML 114
>gi|393770486|ref|ZP_10358975.1| single-strand binding protein [Methylobacterium sp. GXF4]
gi|392724073|gb|EIZ81449.1| single-strand binding protein [Methylobacterium sp. GXF4]
Length = 189
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L SG V L T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V +Y + L V ++L GS +Y+EG L+ + + D +G+ + E+ ++R G + L
Sbjct: 57 VVIYNDNLARVAEQYLRKGSKVYIEGQLQTRKWTDN-SGVEKYTTEVVLQRFRGEMTIL 114
>gi|410683256|ref|YP_006940325.1| Single-stranded DNA-binding protein [Erwinia amylovora ACW56400]
gi|410688907|ref|YP_006962440.1| Single-stranded DNA-binding protein [Erwinia amylovora]
gi|366040030|gb|AEX08407.1| Single-stranded DNA-binding protein [Erwinia amylovora ACW56400]
gi|385268416|gb|AFI56278.1| Single-stranded DNA-binding protein [Erwinia amylovora]
Length = 199
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEIRYMPNGGAVANITLATSESWRDKQTGENREVTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G L LG
Sbjct: 57 RVVLFG-KLAEVTGEYLRKGSQVYIEGQLRTRKWQDQ-SGQDKYTTEVVVNVGGTLQMLG 114
Query: 200 -----------KGGDAQPPSPS 210
G QP PS
Sbjct: 115 GRQHNSSQQQYSGNGGQPQQPS 136
>gi|319404133|emb|CBI77724.1| single-strand DNA binding protein [Bartonella rochalimae ATCC
BAA-1498]
gi|319407148|emb|CBI80786.1| single-strand DNA binding protein [Bartonella sp. 1-1C]
Length = 162
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLGKG 201
++ E L VV ++L GS IY+EG L+ + + D G R EI +++ G L L
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLDSR 117
Query: 202 G 202
G
Sbjct: 118 G 118
>gi|311281398|ref|YP_003943629.1| single-strand binding protein [Enterobacter cloacae SCF1]
gi|308750593|gb|ADO50345.1| single-strand binding protein [Enterobacter cloacae SCF1]
Length = 178
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|388547649|ref|ZP_10150911.1| single-stranded DNA-binding protein [Pseudomonas sp. M47T1]
gi|388274249|gb|EIK93849.1| single-stranded DNA-binding protein [Pseudomonas sp. M47T1]
Length = 172
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIVVDMQGTMQLL 111
>gi|379009508|ref|YP_005267321.1| ssDNA-binding protein [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
gi|375158032|gb|AFA41098.1| ssDNA-binding protein [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
Length = 169
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ+P + + +G V +L T ++ E + TE WH
Sbjct: 5 GINKVILIGYLGQNPDIRYIPNGNAVANITLATSENWRDKNTGEIKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ +L + ++L GS +Y+EG+L+ + + D G + I EI + NG + LG
Sbjct: 57 RIVLFG-KLAEIAGEYLRKGSQVYIEGSLQTRKWQDQ-NGQDKYITEIVVGINGSMQMLG 114
>gi|425744361|ref|ZP_18862419.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-323]
gi|425491205|gb|EKU57491.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-323]
Length = 191
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P K +G ++T FS+ T ++ E + TE WH
Sbjct: 3 GVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWMDKSTGERKEQTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + ++L GS +Y+EG+L + + D
Sbjct: 55 RI-VLHNRLGEIAQQYLRKGSKVYIEGSLRTRQWTD 89
>gi|222874341|gb|EEF11472.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 VNKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ RL +V ++L GS +YVEG+L + + D +G R EI
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQASGQERYATEI 101
>gi|381406032|ref|ZP_09930716.1| single-stranded DNA-binding protein [Pantoea sp. Sc1]
gi|380739231|gb|EIC00295.1| single-stranded DNA-binding protein [Pantoea sp. Sc1]
Length = 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQMLG 114
>gi|424810490|ref|ZP_18235842.1| single strand DNA-binding protein; SSB [Vibrio mimicus SX-4]
gi|342322421|gb|EGU18212.1| single strand DNA-binding protein; SSB [Vibrio mimicus SX-4]
Length = 183
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 11 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 62
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D G R E+ ++ NG + L
Sbjct: 63 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQGYNGIMQML 120
Query: 199 G 199
G
Sbjct: 121 G 121
>gi|324120132|ref|YP_004249893.1| single-strand binding protein [Klebsiella pneumoniae]
gi|323388260|gb|ADX60409.1| single-strand binding protein [Klebsiella pneumoniae]
Length = 180
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTGEMRENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D + R + E+ + +NG + LG
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGAQVYIEGQLRTRNWQDDAE-VTRYVTEVLVGQNGTMQMLG 114
>gi|433185996|ref|ZP_20370220.1| single-stranded DNA-binding protein [Escherichia coli KTE85]
gi|431700317|gb|ELJ65298.1| single-stranded DNA-binding protein [Escherichia coli KTE85]
Length = 185
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 26/148 (17%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V SL T +++ E + TE W
Sbjct: 5 GVNKVILLGHLGQDPEVRYFPNGGGAVANLSLATSDTWKDKQSGEMKEVTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HR+ +Y +L + ++L GS +Y+EG L+ + + D G+ R E+ + NG + L
Sbjct: 57 HRIVIYG-KLAEIAGEYLRKGSKVYIEGQLKTRKWFDQQNGVDRYSTEVVVGVNGVMQML 115
Query: 199 G----------------KGGDAQPPSPS 210
G +GG QPP +
Sbjct: 116 GSLRQQGTAGNGASAPAQGGWGQPPKTA 143
>gi|389776750|ref|ZP_10194146.1| single stranded DNA-binding protein [Rhodanobacter spathiphylli
B39]
gi|388436342|gb|EIL93210.1| single stranded DNA-binding protein [Rhodanobacter spathiphylli
B39]
Length = 177
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P + SG ++ FSL T +++ E + TE WH
Sbjct: 4 GINKVILVGNLGSDPELRSTGSGTSICSFSLATSESWTDKQSGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
R+ ++ RLG + ++L G +Y+EG++ F
Sbjct: 56 RIKIFG-RLGEIAAEYLKKGRQVYIEGSIRTDKF 88
>gi|377579671|ref|ZP_09808635.1| single-stranded DNA-binding protein [Escherichia hermannii NBRC
105704]
gi|377538988|dbj|GAB53800.1| single-stranded DNA-binding protein [Escherichia hermannii NBRC
105704]
Length = 179
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYLPSGGAVANFTLATSDSWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
RV ++ +L V ++L GS +Y+EG L + + D +G R EI +
Sbjct: 57 RVVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINV 104
>gi|386622275|ref|YP_006141855.1| ssDNA-binding protein [Escherichia coli NA114]
gi|333972776|gb|AEG39581.1| Single-stranded DNA-binding protein [Escherichia coli NA114]
Length = 173
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|300781892|ref|YP_003739127.1| single-stranded DNA-binding protein [Erwinia billingiae Eb661]
gi|299060158|emb|CAX53348.1| Single-stranded DNA-binding protein [Erwinia billingiae Eb661]
Length = 199
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEIRYMPNGGAVANITLATSESWRDKQTGENREVTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G L LG
Sbjct: 57 RVVLFG-KLAEVTGEYLRKGSQVYIEGQLRTRKWQDQ-SGQDKYTTEVVVNVGGTLQMLG 114
Query: 200 -----------KGGDAQPPSPS 210
G QP PS
Sbjct: 115 GRQHNSSQQQYSGNGGQPQQPS 136
>gi|283787210|ref|YP_003367075.1| single-stranded binding protein [Citrobacter rodentium ICC168]
gi|282950664|emb|CBG90338.1| single-stranded binding protein [Citrobacter rodentium ICC168]
Length = 176
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + L SG V F+L T +++ E + TE WH
Sbjct: 5 GINKVILVGNLGQDPEVRYLPSGGAVANFTLATSDSWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
R+ ++ +L V ++L GS +Y+EG L + + D +G R EI +
Sbjct: 57 RIVMFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINV 104
>gi|422331407|ref|ZP_16412423.1| single-stranded DNA-binding protein [Escherichia coli 4_1_47FAA]
gi|373247732|gb|EHP67172.1| single-stranded DNA-binding protein [Escherichia coli 4_1_47FAA]
Length = 178
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GINKVILIGHLGQDPELRYFPNGGGAVANLTLATSESWRDKQSGEMKEQTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV ++ +L + ++L GS +Y+EG L + + D G+ R E+ + NG L L
Sbjct: 57 HRVVIFG-KLAEIAGEYLRKGSQVYIEGQLRTRKWFDQQNGVDRYATEVVVSVNGTLQML 115
Query: 199 G 199
G
Sbjct: 116 G 116
>gi|306815713|ref|ZP_07449862.1| Single-stranded DNA-binding protein (SSB) (Helix-destabilizing
protein) [Escherichia coli NC101]
gi|305851375|gb|EFM51830.1| Single-stranded DNA-binding protein (SSB) (Helix-destabilizing
protein) [Escherichia coli NC101]
Length = 178
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GINKVILIGYLGQDPELRYFPNGGGAVANLTLATSESWRDKQSGEMKEQTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV ++ +L + ++L GS +Y+EG L+ + + D G+ R E+ + NG L L
Sbjct: 57 HRVVIFG-KLAEIAGEYLRKGSQVYIEGQLKTRKWFDQQNGVDRYATEVVVSVNGTLQML 115
Query: 199 G 199
G
Sbjct: 116 G 116
>gi|258623351|ref|ZP_05718355.1| single-strand binding protein [Vibrio mimicus VM573]
gi|258584317|gb|EEW09062.1| single-strand binding protein [Vibrio mimicus VM573]
Length = 177
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D G R E+ ++ NG + L
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|298386446|ref|ZP_06996002.1| single-stranded binding protein [Bacteroides sp. 1_1_14]
gi|383121116|ref|ZP_09941832.1| single-stranded DNA-binding protein [Bacteroides sp. 1_1_6]
gi|251838146|gb|EES66234.1| single-stranded DNA-binding protein [Bacteroides sp. 1_1_6]
gi|298260823|gb|EFI03691.1| single-stranded binding protein [Bacteroides sp. 1_1_14]
Length = 158
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K +G V F L T R N T+ R +WH +
Sbjct: 5 KVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--EWHNI- 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGG 202
V RL +V K++ G +Y+EG + + ++D +G +R I EI + L G
Sbjct: 57 VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIFVDNMEMLSPKGANT 115
Query: 203 DAQPPSPS 210
A P PS
Sbjct: 116 GAGAPQPS 123
>gi|383647813|ref|ZP_09958219.1| single-strand binding protein [Sphingomonas elodea ATCC 31461]
Length = 193
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILVGNLGRDPESRAFQNGGKVVELRIATSESWKDRNSGERKEKTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L V ++L GS +Y+EG L+ + + D +G R EI ++ N ++V L
Sbjct: 57 VKIFSEGLANVAERYLRKGSKVYLEGQLQTRKWQDQ-SGADRYSTEIVLQGFNAQMVLL 114
>gi|262401517|ref|ZP_06078084.1| single-stranded DNA-binding protein [Vibrio sp. RC586]
gi|262352232|gb|EEZ01361.1| single-stranded DNA-binding protein [Vibrio sp. RC586]
Length = 177
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + SG V ++ T ++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D G R E+ ++ NG + L
Sbjct: 57 RVTLYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQGYNGIMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|404319339|ref|ZP_10967272.1| single-strand binding protein [Ochrobactrum anthropi CTS-325]
Length = 151
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ KAILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKAILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ E + V ++L G+ +Y+EG L+ + + D G R E+ +++ G L L
Sbjct: 57 VVIFNENVAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEVVLQKFRGELQMLD 115
Query: 200 KGGD 203
G+
Sbjct: 116 AQGE 119
>gi|293386451|ref|YP_003540613.1| single-stranded DNA-binding protein [Erwinia amylovora ATCC 49946]
gi|291201094|emb|CBJ48232.1| single-stranded DNA-binding protein [Erwinia amylovora ATCC 49946]
Length = 184
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +R+ E+ TE WH
Sbjct: 5 GVNKVILVGYLGQDPEVRYMPNGGAVANITLATSESWKDRQTGEDREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L+ + + D G+ + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGALQTRKWTDQ-AGIEKYTTEVIVNVGGTMQMLG 114
>gi|417225796|ref|ZP_12028965.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
gi|386198712|gb|EIH97704.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
Length = 375
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG++G+ P + + +G V + T +++ E TE WH
Sbjct: 203 GINKVIVVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 254
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 255 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 311
>gi|152972922|ref|YP_001338068.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238892532|ref|YP_002917266.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|330004955|ref|ZP_08305070.1| single-strand binding family protein [Klebsiella sp. MS 92-3]
gi|365143200|ref|ZP_09348131.1| single-stranded DNA-binding protein [Klebsiella sp. 4_1_44FAA]
gi|378976442|ref|YP_005224583.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386032633|ref|YP_005952546.1| single-stranded DNA-binding protein [Klebsiella pneumoniae KCTC
2242]
gi|402782952|ref|YP_006638498.1| ssDNA-binding protein [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419974829|ref|ZP_14490245.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980645|ref|ZP_14495928.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985802|ref|ZP_14500940.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991578|ref|ZP_14506542.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997587|ref|ZP_14512382.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003924|ref|ZP_14518566.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420009443|ref|ZP_14523926.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420015915|ref|ZP_14530212.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420021212|ref|ZP_14535394.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420028054|ref|ZP_14542038.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420032642|ref|ZP_14546455.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420038183|ref|ZP_14551832.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420044223|ref|ZP_14557705.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420049942|ref|ZP_14563246.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420055536|ref|ZP_14568702.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420060144|ref|ZP_14573146.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420067194|ref|ZP_14579989.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071837|ref|ZP_14584480.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078458|ref|ZP_14590915.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420082911|ref|ZP_14595201.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|424828439|ref|ZP_18253167.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424935566|ref|ZP_18353938.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425078864|ref|ZP_18481967.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425079386|ref|ZP_18482483.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425089496|ref|ZP_18492589.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425094207|ref|ZP_18497290.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428935418|ref|ZP_19008894.1| ssDNA-binding protein [Klebsiella pneumoniae JHCK1]
gi|150957771|gb|ABR79801.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238544848|dbj|BAH61199.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328536468|gb|EGF62814.1| single-strand binding family protein [Klebsiella sp. MS 92-3]
gi|339759761|gb|AEJ95981.1| single-stranded DNA-binding protein [Klebsiella pneumoniae KCTC
2242]
gi|363649745|gb|EHL88847.1| single-stranded DNA-binding protein [Klebsiella sp. 4_1_44FAA]
gi|364515853|gb|AEW58981.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397344796|gb|EJJ37926.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397345318|gb|EJJ38443.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397350350|gb|EJJ43439.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397362423|gb|EJJ55073.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363290|gb|EJJ55931.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397367611|gb|EJJ60221.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397375775|gb|EJJ68054.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397381299|gb|EJJ73471.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397387029|gb|EJJ79079.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392198|gb|EJJ84002.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397397129|gb|EJJ88810.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397404588|gb|EJJ96089.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397412225|gb|EJK03464.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397412359|gb|EJK03594.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397421643|gb|EJK12649.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397428541|gb|EJK19278.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397434283|gb|EJK24920.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397439873|gb|EJK30300.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397444800|gb|EJK35062.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397451680|gb|EJK41760.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543795|gb|AFQ67944.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405589665|gb|EKB63230.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405599937|gb|EKB73112.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405607898|gb|EKB80850.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610080|gb|EKB82905.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407809753|gb|EKF81004.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414705844|emb|CCN27548.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426300619|gb|EKV62895.1| ssDNA-binding protein [Klebsiella pneumoniae JHCK1]
Length = 174
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V F+L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGTMQML 113
>gi|291615826|ref|YP_003518568.1| Ssb [Pantoea ananatis LMG 20103]
gi|378769103|ref|YP_005197578.1| ssDNA-binding protein [Pantoea ananatis LMG 5342]
gi|386018007|ref|YP_005936308.1| ssDNA-binding protein [Pantoea ananatis AJ13355]
gi|386081182|ref|YP_005994707.1| ssDNA-binding protein [Pantoea ananatis PA13]
gi|291150856|gb|ADD75440.1| Ssb [Pantoea ananatis LMG 20103]
gi|327396090|dbj|BAK13512.1| single-strand binding protein Ssb [Pantoea ananatis AJ13355]
gi|354990363|gb|AER34487.1| single-strand binding protein Ssb [Pantoea ananatis PA13]
gi|365188591|emb|CCF11541.1| Single-stranded DNA-binding protein [Pantoea ananatis LMG 5342]
Length = 181
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQERYTTEVVVNVGGTMQMLG 114
>gi|424667483|ref|ZP_18104508.1| single-stranded DNA-binding protein [Stenotrophomonas maltophilia
Ab55555]
gi|401069097|gb|EJP77620.1| single-stranded DNA-binding protein [Stenotrophomonas maltophilia
Ab55555]
gi|456735469|gb|EMF60220.1| Single-stranded DNA-binding protein [Stenotrophomonas maltophilia
EPM1]
Length = 190
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|417113867|ref|ZP_11965283.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 1.2741]
gi|386141874|gb|EIG83019.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 1.2741]
Length = 150
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K +LVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 5 GINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIKELTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG+L + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGHLRTRSRED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|386717524|ref|YP_006183850.1| ssDNA-binding protein [Stenotrophomonas maltophilia D457]
gi|384077086|emb|CCH11672.1| Single-stranded DNA-binding protein [Stenotrophomonas maltophilia
D457]
Length = 191
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|380696167|ref|ZP_09861026.1| single-stranded DNA-binding protein [Bacteroides faecis MAJ27]
Length = 158
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K +G V F L T R N T+ R +WH +
Sbjct: 5 KVILIGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--EWHNI- 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGG 202
V RL +V K++ G +Y+EG + + + D +G +R I EI + L G
Sbjct: 57 VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYTDQ-SGAMRYITEIFVDNMEMLSPKGANT 115
Query: 203 DAQPPSPS 210
A P PS
Sbjct: 116 GAGAPQPS 123
>gi|344206443|ref|YP_004791584.1| single-strand binding protein [Stenotrophomonas maltophilia JV3]
gi|343777805|gb|AEM50358.1| single-strand binding protein [Stenotrophomonas maltophilia JV3]
Length = 186
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|254522053|ref|ZP_05134108.1| single-stranded DNA binding protein [Stenotrophomonas sp. SKA14]
gi|219719644|gb|EED38169.1| single-stranded DNA binding protein [Stenotrophomonas sp. SKA14]
Length = 196
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|395781095|ref|ZP_10461530.1| single-strand binding protein [Bartonella washoensis 085-0475]
gi|395416228|gb|EJF82618.1| single-strand binding protein [Bartonella washoensis 085-0475]
Length = 150
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G++G P K + SG V F + T +++ + TE WH V
Sbjct: 4 KVTLIGRLGADPESKTMTSGAEVVNFRMATSESYTDKKTNQKIERTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L GS +Y+EG L+ + + D G EI + + G L L K
Sbjct: 56 VFNPHLAKIALQYLSKGSKVYIEGKLQTRKWKDK-NGSEYSSTEIVLPQFKGELYLLDAK 114
Query: 201 GGDAQPPSPSEVRGAGY 217
P+PS V Y
Sbjct: 115 KNQPASPAPSSVTTKSY 131
>gi|126461213|ref|YP_001042327.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638194|ref|YP_002524456.1| ssDNA-binding protein [Rhodobacter sphaeroides KD131]
gi|429207774|ref|ZP_19199030.1| Single-stranded DNA-binding protein [Rhodobacter sp. AKP1]
gi|126102877|gb|ABN75555.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|221158975|gb|ACL99954.1| Single-stranded DNA-binding protein [Rhodobacter sphaeroides KD131]
gi|428189167|gb|EKX57723.1| Single-stranded DNA-binding protein [Rhodobacter sp. AKP1]
Length = 173
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GST+Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|270157880|ref|ZP_06186537.1| single-stranded DNA-binding protein [Legionella longbeachae D-4968]
gi|289163858|ref|YP_003453996.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella longbeachae NSW150]
gi|269989905|gb|EEZ96159.1| single-stranded DNA-binding protein [Legionella longbeachae D-4968]
gi|288857031|emb|CBJ10846.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella longbeachae NSW150]
Length = 157
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VG P + L +G VT S+ T ++ E + TE WH
Sbjct: 4 GINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSEAWKDKATGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV + RLG + +++ GS +YVEG+L + + D
Sbjct: 56 RVVCF-NRLGEIAGEYVRKGSKLYVEGSLRTRKWQD 90
>gi|91206337|ref|YP_538691.1| single strand DNA-binding protein [Escherichia coli UTI89]
gi|218692910|ref|YP_002406022.1| single-stranded DNA-binding protein [Escherichia coli UMN026]
gi|422383460|ref|ZP_16463610.1| single-strand binding family protein [Escherichia coli MS 57-2]
gi|91075788|gb|ABE10668.1| single strand DNA-binding protein [Escherichia coli UTI89]
gi|218350073|emb|CAQ87490.1| Single-stranded DNA-binding protei [Escherichia coli UMN026]
gi|324005340|gb|EGB74559.1| single-strand binding family protein [Escherichia coli MS 57-2]
Length = 188
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
>gi|372267942|ref|ZP_09503990.1| single-stranded DNA-binding protein [Alteromonas sp. S89]
Length = 195
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG VT ++ T +++ + + TE WH
Sbjct: 5 GVNKVILVGNLGGDPETRYMPSGGAVTNVTVATSETWKDKQSGQQQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV V+ RL + ++L GS +Y+EG+L + + D +G R EI
Sbjct: 57 RV-VFFNRLAEIAGEYLRKGSKVYLEGSLRTRKWQDKNSGQDRYTTEI 103
>gi|168770608|ref|ZP_02795615.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|189360566|gb|EDU78985.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
Length = 173
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|49475757|ref|YP_033798.1| single-strand binding protein (ssb) [Bartonella henselae str.
Houston-1]
gi|49238564|emb|CAF27804.1| Single-strand binding protein (ssb) [Bartonella henselae str.
Houston-1]
Length = 172
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|163752256|ref|ZP_02159456.1| single-strand binding protein [Shewanella benthica KT99]
gi|161327839|gb|EDP99019.1| single-strand binding protein [Shewanella benthica KT99]
Length = 227
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+ +Y RL + ++L GS +Y+EG L+ + D TG R EI L G
Sbjct: 56 NIVMY-RRLAEIAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEINAHEMQMLDSRG 114
Query: 200 KGGDAQ 205
+ G Q
Sbjct: 115 QSGGQQ 120
>gi|88608751|ref|YP_506634.1| single-strand binding protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600920|gb|ABD46388.1| single-strand binding protein [Neorickettsia sennetsu str.
Miyayama]
Length = 151
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G+ P + + + + V FSL T N++ E + TE WH+
Sbjct: 2 INKVILVGNLGKDPEVRTMSNAKQVATFSLATTENWNDKNTGERVSKTE--------WHQ 53
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V V+ E L V+ ++ G+ +Y+EG+L+ + + D G+ R E+ +
Sbjct: 54 VVVFNEPLIKVISNYVNKGTRLYIEGSLQTRKWTDN-NGIERYTTEVVL 101
>gi|42523087|ref|NP_968467.1| single-strand binding protein [Bdellovibrio bacteriovorus HD100]
gi|426403566|ref|YP_007022537.1| single-strand binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
gi|39575292|emb|CAE79460.1| single-strand binding protein [Bdellovibrio bacteriovorus HD100]
gi|425860234|gb|AFY01270.1| single-strand binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 143
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTG--GIRNNRRPLENENPTEYANRCAVQ 137
G+ K ILVG++G P K + SG TV +L T +++ +R E
Sbjct: 3 GVNKVILVGRLGADPEVKAIGSGSTVARLNLATSESWVKDGQRQERTE------------ 50
Query: 138 WHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVF 197
WHR++V+ +L + KHL G +YVEG L+ + + D G R EI + F
Sbjct: 51 WHRITVWG-KLAEICGKHLSKGRQVYVEGKLQTRQWEDQ-QGQKRYTTEIVAS---TVQF 105
Query: 198 LGKGG 202
LG G
Sbjct: 106 LGAAG 110
>gi|319786424|ref|YP_004145899.1| single-strand binding protein [Pseudoxanthomonas suwonensis 11-1]
gi|317464936|gb|ADV26668.1| single-strand binding protein [Pseudoxanthomonas suwonensis 11-1]
Length = 169
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG VT L T +R +R + E +WH
Sbjct: 4 GINKVILVGNLGDDPETKYTQSGMAVTTIRLATTSVRKDRDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
RV + +LG + ++L GS YVEG++ F G R I EI
Sbjct: 55 RVKFFG-KLGEIAGEYLRKGSQCYVEGSIRYDKFTGQ-DGQERYITEIV 101
>gi|386827718|ref|ZP_10114825.1| single stranded DNA-binding protein [Beggiatoa alba B18LD]
gi|386428602|gb|EIJ42430.1| single stranded DNA-binding protein [Beggiatoa alba B18LD]
Length = 178
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG++G P + SG + SL T +++ + + TE WHR
Sbjct: 4 VNKVILVGRLGNDPEVRYSASGSAMANISLATSEQWKDKQSGQKQEKTE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
V V+ ERL +V ++L GS IYVEG L+ + + D G R EI R + LG
Sbjct: 56 V-VFFERLAEIVGEYLRKGSLIYVEGKLQTRKWQD-NNGQERYTTEIVAR---EMTMLG 109
>gi|423713786|ref|ZP_17688046.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421903|gb|EJF88126.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
OK-94-513]
Length = 147
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G +P +K + +G V F + T ++R + + TE WH V
Sbjct: 4 KVILIGYLGANPEKKTMNNGTEVVNFRMATSESYTDKRTNQKVSKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFL-GK 200
V+ L + +++L G +Y+EG L+ + + D G EI + G L L GK
Sbjct: 56 VFNPHLAKIALQYLHKGRKVYIEGQLQTRKWQDK-NGQDHYTTEIVLPHYKGDLKLLDGK 114
Query: 201 GGDAQPPSPS 210
D Q S S
Sbjct: 115 NDDNQEQSSS 124
>gi|190573212|ref|YP_001971057.1| single-stranded DNA-binding protein [Stenotrophomonas maltophilia
K279a]
gi|190011134|emb|CAQ44743.1| putative single-strand binding protein [Stenotrophomonas
maltophilia K279a]
Length = 190
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|440733949|ref|ZP_20913583.1| single-stranded DNA-binding protein, partial [Xanthomonas
translucens DAR61454]
gi|440357967|gb|ELP95431.1| single-stranded DNA-binding protein, partial [Xanthomonas
translucens DAR61454]
Length = 135
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K ++G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDTKYTQAGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG++
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSI 82
>gi|192360087|ref|YP_001981237.1| single-stranded DNA-binding protein [Cellvibrio japonicus Ueda107]
gi|190686252|gb|ACE83930.1| single-stranded DNA-binding protein [Cellvibrio japonicus Ueda107]
Length = 235
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P K + SG VT S+ T ++ + + TE WH
Sbjct: 43 GINKVILIGNIGQDPEVKYMPSGGAVTNISVATSETWKDKNTGQAQERTE--------WH 94
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV ++ RLG + ++L GS +Y+EG+L + +
Sbjct: 95 RVVLF-NRLGEIAGEYLRKGSKVYIEGSLRTRKW 127
>gi|422024005|ref|ZP_16370506.1| single-stranded DNA-binding protein [Providencia sneebia DSM 19967]
gi|414091405|gb|EKT53090.1| single-stranded DNA-binding protein [Providencia sneebia DSM 19967]
Length = 173
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVIFG-KLAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNIGGSMQMLG 114
>gi|194364811|ref|YP_002027421.1| single-stranded DNA-binding protein [Stenotrophomonas maltophilia
R551-3]
gi|194347615|gb|ACF50738.1| single-strand binding protein [Stenotrophomonas maltophilia R551-3]
Length = 191
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G +T SL T +R ++ + E +WH
Sbjct: 4 GINKVILVGNLGNDPDVKYTQGGMAITRISLATTSVRKDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ +LG + ++L GS++YVEG+L
Sbjct: 55 RV-VFFGKLGEIAGEYLRKGSSVYVEGSL 82
>gi|77462337|ref|YP_351841.1| single-strand DNA binding protein [Rhodobacter sphaeroides 2.4.1]
gi|85700436|sp|Q9ZAQ8.2|SSB_RHOS4 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|77386755|gb|ABA77940.1| Single-strand DNA binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 173
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GST+Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFDENLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|10955315|ref|NP_052656.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
Sakai]
gi|168752311|ref|ZP_02777333.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4113]
gi|168758957|ref|ZP_02783964.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4401]
gi|168763064|ref|ZP_02788071.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4501]
gi|168769264|ref|ZP_02794271.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4486]
gi|168777513|ref|ZP_02802520.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4196]
gi|168784340|ref|ZP_02809347.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4076]
gi|168790146|ref|ZP_02815153.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC869]
gi|168801260|ref|ZP_02826267.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC508]
gi|195939991|ref|ZP_03085373.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4024]
gi|208811302|ref|ZP_03253062.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208817453|ref|ZP_03258482.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208823394|ref|ZP_03263711.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209395627|ref|YP_002268446.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|217329905|ref|ZP_03445980.1| single-strand binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|254667507|ref|YP_003082193.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|261225679|ref|ZP_05939960.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261257866|ref|ZP_05950399.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK966]
gi|387885652|ref|YP_006315953.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|416308050|ref|ZP_11654905.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|416322665|ref|ZP_11664382.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|416332791|ref|ZP_11670658.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|419043096|ref|ZP_13590078.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3A]
gi|419050589|ref|ZP_13597479.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3B]
gi|419056167|ref|ZP_13603009.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3C]
gi|419063045|ref|ZP_13609780.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3D]
gi|419072598|ref|ZP_13618189.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3E]
gi|419083934|ref|ZP_13629368.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4A]
gi|419088981|ref|ZP_13634330.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4B]
gi|419092093|ref|ZP_13637391.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4C]
gi|419097335|ref|ZP_13642569.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4D]
gi|419103039|ref|ZP_13648199.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4E]
gi|419108136|ref|ZP_13653243.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4F]
gi|420270884|ref|ZP_14773240.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|420274435|ref|ZP_14776757.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|420283125|ref|ZP_14785356.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|420286665|ref|ZP_14788865.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|420289707|ref|ZP_14791880.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|420296711|ref|ZP_14798803.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|420305114|ref|ZP_14807109.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|420308456|ref|ZP_14810425.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|420315788|ref|ZP_14817665.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|421811780|ref|ZP_16247545.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|421816008|ref|ZP_16251584.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0821]
gi|421822795|ref|ZP_16258228.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|423652164|ref|ZP_17627660.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|424074700|ref|ZP_17812102.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|424080850|ref|ZP_17817763.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|424093537|ref|ZP_17829429.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|424093629|ref|ZP_17829510.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|424106716|ref|ZP_17841371.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|424106883|ref|ZP_17841521.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|424119079|ref|ZP_17852856.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|424119177|ref|ZP_17852946.1| single-stranded DNA-binding protein [Escherichia coli PA5]
gi|424131305|ref|ZP_17864180.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|424131411|ref|ZP_17864277.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|424137875|ref|ZP_17870253.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|424144319|ref|ZP_17876135.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|424150604|ref|ZP_17881925.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|424175397|ref|ZP_17887518.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|424336610|ref|ZP_17898786.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|424416861|ref|ZP_17899003.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|424453013|ref|ZP_17904609.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|424459262|ref|ZP_17910295.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|424465744|ref|ZP_17915993.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|424472207|ref|ZP_17921924.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|424484086|ref|ZP_17933037.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|424484247|ref|ZP_17933177.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|424497202|ref|ZP_17944622.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|424503773|ref|ZP_17950616.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|424510032|ref|ZP_17956360.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|424517475|ref|ZP_17961994.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|424517623|ref|ZP_17962108.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|424529405|ref|ZP_17973090.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|424529528|ref|ZP_17973200.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|424547844|ref|ZP_17990121.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|424554120|ref|ZP_17995900.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|424560215|ref|ZP_18001572.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|424560353|ref|ZP_18001697.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|424566492|ref|ZP_18007465.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|424584804|ref|ZP_18024423.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|425101219|ref|ZP_18503926.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.2239]
gi|425108793|ref|ZP_18510980.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|425122879|ref|ZP_18524518.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.0586]
gi|425135219|ref|ZP_18536004.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|425138390|ref|ZP_18538858.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|425147373|ref|ZP_18547336.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0869]
gi|425159237|ref|ZP_18558474.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|425162772|ref|ZP_18561710.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|425167314|ref|ZP_18565984.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|425180935|ref|ZP_18578652.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
gi|425189686|ref|ZP_18586925.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|425192276|ref|ZP_18589283.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|425196385|ref|ZP_18593110.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|425202927|ref|ZP_18599094.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|425221371|ref|ZP_18616295.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|425221485|ref|ZP_18616401.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|425233939|ref|ZP_18627954.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|425234093|ref|ZP_18628094.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|425239882|ref|ZP_18633573.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|425258266|ref|ZP_18650725.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|425258420|ref|ZP_18650852.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|425270441|ref|ZP_18662037.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|425298012|ref|ZP_18688082.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|425314606|ref|ZP_18703742.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|425320650|ref|ZP_18709397.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|425326832|ref|ZP_18715123.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|425333068|ref|ZP_18720846.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|425339270|ref|ZP_18726564.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|425342421|ref|ZP_18729400.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|425351413|ref|ZP_18737843.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|425357521|ref|ZP_18743555.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|425363632|ref|ZP_18749252.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|425369937|ref|ZP_18754961.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|425376053|ref|ZP_18760662.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|425389232|ref|ZP_18772765.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|425389447|ref|ZP_18772950.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|425401744|ref|ZP_18784416.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|425401870|ref|ZP_18784523.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|425414156|ref|ZP_18795892.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|425414528|ref|ZP_18796204.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|425425604|ref|ZP_18806706.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|428944151|ref|ZP_19016854.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1467]
gi|428956208|ref|ZP_19027971.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1042]
gi|428956314|ref|ZP_19028068.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 89.0511]
gi|428968864|ref|ZP_19039538.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0091]
gi|428975004|ref|ZP_19045246.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0039]
gi|428975145|ref|ZP_19045362.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.2281]
gi|428987045|ref|ZP_19056392.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0055]
gi|428992962|ref|ZP_19061923.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0056]
gi|428993058|ref|ZP_19062013.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 94.0618]
gi|428999035|ref|ZP_19067595.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0183]
gi|429011530|ref|ZP_19078867.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.1288]
gi|429017708|ref|ZP_19084559.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0943]
gi|429017853|ref|ZP_19084677.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0428]
gi|429029903|ref|ZP_19095820.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0939]
gi|429041891|ref|ZP_19106942.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0932]
gi|429042007|ref|ZP_19107051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0107]
gi|429050351|ref|ZP_19114953.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0003]
gi|429055747|ref|ZP_19120133.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.1742]
gi|429064353|ref|ZP_19128277.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0007]
gi|429070636|ref|ZP_19134033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0672]
gi|429076131|ref|ZP_19139363.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|429076597|ref|ZP_19139820.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0713]
gi|429823316|ref|ZP_19354906.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0109]
gi|429829773|ref|ZP_19360726.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0010]
gi|444922014|ref|ZP_21241806.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|444942083|ref|ZP_21260641.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0816]
gi|444947504|ref|ZP_21265856.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0839]
gi|444951797|ref|ZP_21270001.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0848]
gi|444956001|ref|ZP_21274030.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1753]
gi|444966845|ref|ZP_21284355.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1775]
gi|444966920|ref|ZP_21284423.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1793]
gi|444979431|ref|ZP_21296410.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli ATCC 700728]
gi|444983340|ref|ZP_21300217.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA11]
gi|444994015|ref|ZP_21310636.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA19]
gi|444999351|ref|ZP_21315831.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA13]
gi|445002602|ref|ZP_21318999.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA2]
gi|445004823|ref|ZP_21321188.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA47]
gi|445015586|ref|ZP_21331658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA48]
gi|445018390|ref|ZP_21334376.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA8]
gi|445021272|ref|ZP_21337208.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 7.1982]
gi|445029792|ref|ZP_21345477.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1781]
gi|445034969|ref|ZP_21350513.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1762]
gi|445045458|ref|ZP_21360748.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.4880]
gi|445051137|ref|ZP_21366224.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0083]
gi|445054134|ref|ZP_21369098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0670]
gi|452967862|ref|ZP_21966089.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4009]
gi|3337047|dbj|BAA31806.1| single-strand binding protein [Escherichia coli O157:H7 str. Sakai]
gi|187767263|gb|EDU31107.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4196]
gi|188013818|gb|EDU51940.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4113]
gi|188998480|gb|EDU67476.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4076]
gi|189354334|gb|EDU72753.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4401]
gi|189361618|gb|EDU80037.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4486]
gi|189366719|gb|EDU85135.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4501]
gi|189370343|gb|EDU88759.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC869]
gi|189376575|gb|EDU94991.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC508]
gi|208729932|gb|EDZ79149.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208730630|gb|EDZ79329.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208736989|gb|EDZ84674.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209157082|gb|ACI34516.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|217317136|gb|EEC25569.1| single-strand binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|254595859|gb|ACT75219.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|320188679|gb|EFW63340.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|326337204|gb|EGD61040.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|326347701|gb|EGD71419.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|377897374|gb|EHU61755.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3B]
gi|377901831|gb|EHU66144.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3A]
gi|377905550|gb|EHU69815.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3E]
gi|377910966|gb|EHU75145.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3D]
gi|377911072|gb|EHU75250.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3C]
gi|377921234|gb|EHU85235.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4A]
gi|377926935|gb|EHU90861.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4B]
gi|377945546|gb|EHV09240.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4C]
gi|377948625|gb|EHV12274.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4D]
gi|377952678|gb|EHV16260.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4E]
gi|377965632|gb|EHV29049.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4F]
gi|386799110|gb|AFJ32143.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|390635948|gb|EIN15559.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|390654728|gb|EIN32755.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|390654807|gb|EIN32818.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|390655455|gb|EIN33396.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|390671469|gb|EIN47897.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|390671873|gb|EIN48246.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|390679181|gb|EIN55106.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|390679777|gb|EIN55651.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|390695382|gb|EIN69915.1| single-stranded DNA-binding protein [Escherichia coli PA5]
gi|390709901|gb|EIN82941.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|390713131|gb|EIN86071.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|390713699|gb|EIN86630.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|390716247|gb|EIN89058.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|390723171|gb|EIN95789.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|390735099|gb|EIO06523.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|390735224|gb|EIO06621.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|390754006|gb|EIO23637.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|390754233|gb|EIO23852.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|390758521|gb|EIO27963.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|390761015|gb|EIO30323.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|390777563|gb|EIO45365.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|390779208|gb|EIO46940.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|390782104|gb|EIO49769.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|390783801|gb|EIO51388.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|390790670|gb|EIO58081.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|390791566|gb|EIO58950.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|390803324|gb|EIO70336.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|390810949|gb|EIO77673.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|390815769|gb|EIO82292.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|390818267|gb|EIO84657.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|390820912|gb|EIO87158.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|390825712|gb|EIO91620.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|390826351|gb|EIO92204.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|390838751|gb|EIP02939.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|390846529|gb|EIP10109.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|390856959|gb|EIP19494.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|390864727|gb|EIP26808.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|390873061|gb|EIP34314.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|390873454|gb|EIP34658.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|390878819|gb|EIP39631.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|390903029|gb|EIP62091.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|390908129|gb|EIP66965.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|390913153|gb|EIP71760.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|390913952|gb|EIP72504.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|390918549|gb|EIP76944.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|408061653|gb|EKG96162.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|408075007|gb|EKH09252.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|408081803|gb|EKH15807.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|408088135|gb|EKH21521.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|408097861|gb|EKH30718.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
gi|408100009|gb|EKH32577.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|408116553|gb|EKH47849.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|408132816|gb|EKH62757.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|408133479|gb|EKH63377.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|408133811|gb|EKH63685.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|408143105|gb|EKH72435.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|408155887|gb|EKH84135.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|408168373|gb|EKH95799.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|408169264|gb|EKH96556.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|408175429|gb|EKI02346.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|408179279|gb|EKI05963.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|408194871|gb|EKI20309.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|408207973|gb|EKI32656.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|408222785|gb|EKI46608.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|408233901|gb|EKI56957.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|408235781|gb|EKI58710.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|408241811|gb|EKI64423.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|408250722|gb|EKI72532.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|408261628|gb|EKI82597.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|408261844|gb|EKI82803.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|408270367|gb|EKI90562.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|408272613|gb|EKI92691.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|408280741|gb|EKJ00219.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|408287306|gb|EKJ06184.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|408303015|gb|EKJ20486.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|408314855|gb|EKJ31232.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|408320557|gb|EKJ36651.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|408321769|gb|EKJ37774.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|408339813|gb|EKJ54351.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|408351352|gb|EKJ65133.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|408353862|gb|EKJ67339.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|408557136|gb|EKK33674.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|408561824|gb|EKK38017.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.2239]
gi|408575142|gb|EKK50841.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|408582346|gb|EKK57568.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|408586900|gb|EKK61601.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.0586]
gi|408587278|gb|EKK61938.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0869]
gi|408603289|gb|EKK76935.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|408618554|gb|EKK91629.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0821]
gi|427200314|gb|EKV70744.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1042]
gi|427216550|gb|EKV85658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0091]
gi|427219795|gb|EKV88749.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 89.0511]
gi|427220293|gb|EKV89226.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1467]
gi|427221078|gb|EKV89953.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0039]
gi|427236052|gb|EKW03653.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.2281]
gi|427236105|gb|EKW03702.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0055]
gi|427236631|gb|EKW04193.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0056]
gi|427255865|gb|EKW22103.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 94.0618]
gi|427255875|gb|EKW22112.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.1288]
gi|427256560|gb|EKW22720.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0943]
gi|427272767|gb|EKW37491.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0183]
gi|427287727|gb|EKW51459.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0428]
gi|427287985|gb|EKW51655.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0932]
gi|427295135|gb|EKW58274.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0939]
gi|427301939|gb|EKW64787.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0003]
gi|427308825|gb|EKW71166.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0007]
gi|427312895|gb|EKW75033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0107]
gi|427313797|gb|EKW75878.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0672]
gi|427315243|gb|EKW77250.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.1742]
gi|427324113|gb|EKW85604.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|427334967|gb|EKW96026.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0713]
gi|429261167|gb|EKY44627.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0109]
gi|429262554|gb|EKY45861.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0010]
gi|444552933|gb|ELV30664.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|444559536|gb|ELV36753.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0839]
gi|444560253|gb|ELV37425.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0816]
gi|444569336|gb|ELV45936.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1775]
gi|444569581|gb|ELV46162.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0848]
gi|444584041|gb|ELV59714.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1753]
gi|444587749|gb|ELV63160.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1793]
gi|444598079|gb|ELV73018.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli ATCC 700728]
gi|444601511|gb|ELV76312.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA11]
gi|444601743|gb|ELV76510.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA19]
gi|444601751|gb|ELV76517.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA13]
gi|444615789|gb|ELV89978.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA2]
gi|444617676|gb|ELV91785.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA48]
gi|444630985|gb|ELW04607.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA8]
gi|444634920|gb|ELW08366.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA47]
gi|444641326|gb|ELW14559.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1781]
gi|444645762|gb|ELW18816.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1762]
gi|444649359|gb|ELW22258.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 7.1982]
gi|444662018|gb|ELW34288.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.4880]
gi|444666495|gb|ELW38560.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0083]
gi|444675223|gb|ELW46697.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0670]
Length = 150
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLV 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|414162520|ref|ZP_11418767.1| single-stranded DNA-binding protein [Afipia felis ATCC 53690]
gi|410880300|gb|EKS28140.1| single-stranded DNA-binding protein [Afipia felis ATCC 53690]
Length = 161
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGADPDVRRTQDGRPIVNLSIATSDTWRDKNTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +YVEG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYVEGALQTRKWQD 91
>gi|422831445|ref|ZP_16879589.1| single-stranded DNA-binding protein [Escherichia coli B093]
gi|371601773|gb|EHN90496.1| single-stranded DNA-binding protein [Escherichia coli B093]
Length = 161
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ+P + + G V +L T +++ E TE WH
Sbjct: 5 GINKVILIGNLGQNPDIRYMPDGGAVANIALATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D TG R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYIEGQLRTRKWTDQ-TGQERYTTEVVVHTGGTMQMLG 114
>gi|327413073|emb|CAX68102.1| single-stranded dna-binding protein [Salmonella enterica subsp.
enterica]
Length = 179
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + + + VT SL T +++ E + TE WH
Sbjct: 5 GINKVILVGHLGQDPEVRYMPNSTAVTGLSLATSESWRDKQTGEMKENTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L + + D G+ R E+ + NG + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDN-AGVDRWTTEVVVGINGTMQML 113
>gi|218691232|ref|YP_002399444.1| Single-stranded DNA-binding protein [Escherichia coli ED1a]
gi|218428796|emb|CAR09740.2| Single-stranded DNA-binding protein (SSB) (Helix-destabilizing
protein) [Escherichia coli ED1a]
Length = 185
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 26/148 (17%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
G+ K IL+G +GQ P + G V SL T +++ E + TE W
Sbjct: 5 GVNKVILLGHLGQDPEVRYFPNGGGAVVNLSLATSDTWKDKQSGEMKEVTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HR+ +Y +L + ++L GS +Y+EG L+ + + D G+ R E+ + NG + L
Sbjct: 57 HRIVIYG-KLAEIAGEYLRKGSKVYIEGQLKTRKWFDQQNGVDRYSTEVVVGVNGVMQML 115
Query: 199 G----------------KGGDAQPPSPS 210
G +GG QPP +
Sbjct: 116 GSLRQQGTAGNGASAPAQGGWGQPPKTA 143
>gi|75675758|ref|YP_318179.1| single-stranded DNA-binding protein [Nitrobacter winogradskyi
Nb-255]
gi|74420628|gb|ABA04827.1| single-strand binding protein [Nitrobacter winogradskyi Nb-255]
Length = 163
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSESWRDRTSGERKERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
V ++ E L VV ++L GS +YVEG L+ + + D G+ + E+ ++ N L L
Sbjct: 57 VVIFNEGLCKVVEQYLKKGSKVYVEGQLQTRKWTDQ-NGVEKYSTEVVLQNFNSTLTMLD 115
Query: 199 ----GKGGDAQP 206
G GG+ P
Sbjct: 116 GRNSGGGGNFGP 127
>gi|334345916|ref|YP_004554468.1| single-strand binding protein [Sphingobium chlorophenolicum L-1]
gi|334102538|gb|AEG49962.1| single-strand binding protein [Sphingobium chlorophenolicum L-1]
Length = 190
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILVGNLGADPEVRSFQNGGKVCNIRIATSETWKDRNSGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L GV ++L GS +YVEG L+ + + D +G R E+ ++
Sbjct: 57 VAIFSEGLAGVAERYLRKGSKVYVEGKLQTRKWQDQ-SGNDRYTTEVVLQ 105
>gi|169794714|ref|YP_001712507.1| single-strand binding protein (helix-destabilizing protein)
[Acinetobacter baumannii AYE]
gi|417563263|ref|ZP_12214142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|421198782|ref|ZP_15655947.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|421621117|ref|ZP_16062041.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|421641424|ref|ZP_16081966.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|421646656|ref|ZP_16087101.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|421700403|ref|ZP_16139919.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|169147641|emb|CAM85504.1| putative Single-strand binding protein (Helix-destabilizing
protein) [Acinetobacter baumannii AYE]
gi|395525845|gb|EJG13934.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|395565678|gb|EJG27325.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|404570110|gb|EKA75188.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|408515219|gb|EKK16808.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|408517289|gb|EKK18834.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|408698802|gb|EKL44289.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
Length = 117
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G +P+ K+ ++G + FS+ T ++R + TE WH
Sbjct: 3 GINKVILVGMLGANPIPKQFQNGGSYAQFSIATSEKYQDKRTGDWIENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RI-VAHNRLGEIACQFLKKGSKVYIEGSLHTRKWTD 89
>gi|424864886|ref|ZP_18288782.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86B]
gi|400759151|gb|EJP73336.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86B]
Length = 145
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + V S+ T ++ E + TE WH
Sbjct: 4 GVNKVILVGNLGQKPEMRYTATQSAVANLSVATTESWKDKESGEMRDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV VY +L +V K+L GS++Y+EG L+ + + D G R EI L LG
Sbjct: 56 RV-VYFGKLAEIVEKYLDKGSSVYIEGKLQTRKWQDK-NGADRWTTEIV---GSELTMLG 110
>gi|302383738|ref|YP_003819561.1| single-strand binding protein [Brevundimonas subvibrioides ATCC
15264]
gi|302194366|gb|ADL01938.1| single-strand binding protein [Brevundimonas subvibrioides ATCC
15264]
Length = 162
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + +G + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRSMPNGDRIANLSIATSETWRDKSSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ + + VV ++ GST+Y+EG L+ + + D G+ + EI + + G L LG
Sbjct: 57 VVIFNDNIVKVVENYVKKGSTVYIEGALQTRKWTDK-DGVEKYSTEIVVGKFKGELTMLG 115
>gi|417129931|ref|ZP_11975738.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.0588]
gi|386154270|gb|EIH05540.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.0588]
Length = 173
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|408379630|ref|ZP_11177223.1| single-stranded DNA-binding protein [Agrobacterium albertimagni
AOL15]
gi|407746441|gb|EKF57964.1| single-stranded DNA-binding protein [Agrobacterium albertimagni
AOL15]
Length = 181
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P ++ + GR + + T ++ E + TE WH
Sbjct: 5 VNKVILIGNLGADPEIRRTQDGRPIANLRIATSETWRDKNSGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L V ++L GST+Y+EG L+ + + D +G R E+ ++ NG L L
Sbjct: 57 VVIFNEGLCKVAEQYLKKGSTVYIEGQLQTRKWQDQ-SGADRYSTEVVLQGFNGNLTML 114
>gi|417225622|ref|ZP_12028791.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.154]
gi|386198538|gb|EIH97530.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.154]
Length = 195
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|444921571|ref|ZP_21241406.1| Single-stranded DNA-binding protein [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507298|gb|ELV07475.1| Single-stranded DNA-binding protein [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 185
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P K + +G V ++ T +R + + TE WH
Sbjct: 4 GINKVILLGHLGRDPEVKYMPNGNAVANMTIATSESWKDRNSGQPQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D +G R EI + +G + L
Sbjct: 56 RVVIFG-KLADIAGQYLRKGSLVYIEGQLQTRKWTDQ-SGQDRYTTEIVVNMSGTMQMLD 113
Query: 200 KGG 202
+ G
Sbjct: 114 RKG 116
>gi|432619989|ref|ZP_19856052.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE75]
gi|431145748|gb|ELE47357.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE75]
Length = 175
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|352080042|ref|ZP_08951111.1| single-strand binding protein [Rhodanobacter sp. 2APBS1]
gi|351684751|gb|EHA67820.1| single-strand binding protein [Rhodanobacter sp. 2APBS1]
Length = 165
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + SG TV FSL T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGSDPEVRSTGSGTTVCSFSLATSESWTDKQSGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
R+ ++ RLG + ++L G +Y+EG++ F
Sbjct: 56 RIKIFG-RLGEIAGEYLKKGRQVYIEGSIRTDKF 88
>gi|345134027|ref|YP_004823709.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|417720679|ref|ZP_12369537.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|417720780|ref|ZP_12369637.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|429723658|ref|ZP_19258538.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9450]
gi|432360978|ref|ZP_19604177.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE4]
gi|333011547|gb|EGK30960.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|333011661|gb|EGK31070.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|345109169|dbj|BAK64452.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|429394597|gb|EKZ30972.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9450]
gi|430871566|gb|ELB95206.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE4]
Length = 175
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|70732853|ref|YP_262620.1| single-stranded DNA-binding protein [Pseudomonas protegens Pf-5]
gi|68347152|gb|AAY94758.1| single-strand DNA-binding protein [Pseudomonas protegens Pf-5]
Length = 169
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIIVDMQGTMQLL 111
>gi|433186510|ref|ZP_20370708.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE85]
gi|431698107|gb|ELJ63170.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE85]
Length = 175
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRSRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|331674497|ref|ZP_08375257.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA280]
gi|331068591|gb|EGI39986.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA280]
Length = 178
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K IL+G +GQ P + G V +L T +++ E + TE W
Sbjct: 5 GINKVILIGHLGQDPELRYFPNGGGAVANLTLATSESWRDKQSGEMKEQTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV ++ +L + ++L GS +Y+EG L + + D G+ R E+ + NG L L
Sbjct: 57 HRVVIFG-KLAEIAGEYLRKGSQVYIEGQLRTRKWFDQQNGVDRYSTEVVVSVNGTLQML 115
Query: 199 G 199
G
Sbjct: 116 G 116
>gi|291391222|ref|XP_002712158.1| PREDICTED: single-stranded DNA binding protein 1 [Oryctolagus
cuniculus]
Length = 148
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + +R +NE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSR---DNETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 KWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYMD 121
>gi|183597300|ref|ZP_02958793.1| hypothetical protein PROSTU_00550 [Providencia stuartii ATCC 25827]
gi|386742961|ref|YP_006216140.1| single-stranded DNA-binding protein [Providencia stuartii MRSN
2154]
gi|188023320|gb|EDU61360.1| single-strand binding family protein [Providencia stuartii ATCC
25827]
gi|384479654|gb|AFH93449.1| single-stranded DNA-binding protein [Providencia stuartii MRSN
2154]
Length = 171
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVIFG-KLAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNIGGSMQMLG 114
>gi|395778011|ref|ZP_10458524.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|423715936|ref|ZP_17690157.1| single-strand binding protein [Bartonella elizabethae F9251]
gi|395418320|gb|EJF84647.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|395428380|gb|EJF94457.1| single-strand binding protein [Bartonella elizabethae F9251]
Length = 168
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 11/131 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGSDPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ E L + ++L GS IY+EG L+ + + D G R EI +++ G L L G+
Sbjct: 59 IFNENLVKIAEQYLKKGSKIYLEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLDGR 117
Query: 201 GGDAQPPSPSE 211
GG + S+
Sbjct: 118 GGASGEQGASQ 128
>gi|417147758|ref|ZP_11988258.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 1.2264]
gi|386162323|gb|EIH24123.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 1.2264]
Length = 173
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|392952531|ref|ZP_10318086.1| single-strand binding protein [Hydrocarboniphaga effusa AP103]
gi|391861493|gb|EIT72021.1| single-strand binding protein [Hydrocarboniphaga effusa AP103]
Length = 175
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P + +G +VT ++ T ++ + E +WH
Sbjct: 4 GINKVILIGNLGKDPEARSFPNGGSVTNITVATSDSWRDKDGNQQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V V+ +LG + ++L GS +Y+EG+L + + D +G R EI
Sbjct: 55 NV-VFHNKLGEIAAQYLRKGSKVYIEGSLRTRKWQDKTSGQDRYTTEI 101
>gi|432414426|ref|ZP_19657073.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE39]
gi|432449013|ref|ZP_19691299.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|430931579|gb|ELC52023.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE39]
gi|430969368|gb|ELC86488.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
Length = 175
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRSRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|429742508|ref|ZP_19276136.1| single-strand binding family protein [Neisseria sp. oral taxon 020
str. F0370]
gi|429168263|gb|EKY10107.1| single-strand binding family protein [Neisseria sp. oral taxon 020
str. F0370]
Length = 169
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G++G+ P + + +G V FS+ T N+R+ + + TE WH ++
Sbjct: 5 KVILIGRLGRDPEVRYMPNGEPVCNFSMATSETWNDRQSGQRQERTE--------WHNIT 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
+Y RL + ++L GS IY+EG ++ + + D
Sbjct: 57 MY-RRLAEIAGQYLKKGSQIYIEGRIQSRKYQD 88
>gi|319408089|emb|CBI81742.1| Single-stranded DNA-binding protein [Bartonella schoenbuchensis R1]
Length = 148
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K ILVG +G P + + SG V F + T ++ E TE WH
Sbjct: 2 INKVILVGNLGADPESRTMTSGAEVVNFRIATSQSYTDKTTGEKVEKTE--------WHS 53
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFLG 199
+ V+ L V +++L GS +YVEG L+ + + D +G EI + + G L L
Sbjct: 54 IVVFNPHLAKVALQYLGKGSKVYVEGQLQTRKWQDK-SGQTHYTTEIILPQYKGELKILD 112
Query: 200 KGGDAQP 206
A+P
Sbjct: 113 SVQKAEP 119
>gi|15804651|ref|NP_290692.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EDL933]
gi|25294292|pir||E86099 ssDNA-binding protein [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gi|12519013|gb|AAG59257.1|AE005639_1 ssDNA-binding protein [Escherichia coli O157:H7 str. EDL933]
Length = 178
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMXMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|104779786|ref|YP_606284.1| single-stranded DNA-binding protein [Pseudomonas entomophila L48]
gi|95108773|emb|CAK13467.1| ssDNA-binding protein [Pseudomonas entomophila L48]
Length = 180
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 18/131 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLLG 112
Query: 200 -------KGGD 203
+GGD
Sbjct: 113 GRPQNQQQGGD 123
>gi|395789458|ref|ZP_10468978.1| single-stranded DNA-binding protein [Bartonella taylorii 8TBB]
gi|395430001|gb|EJF96053.1| single-stranded DNA-binding protein [Bartonella taylorii 8TBB]
Length = 172
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL--- 198
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++ G L L
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQKYRGELQMLDGR 117
Query: 199 GKGGDAQPPSPSEVRGAGY 217
G G Q ++ G GY
Sbjct: 118 GAAGGEQIQGANQASG-GY 135
>gi|315364701|pdb|3PGZ|A Chain A, Crystal Structure Of A Single Strand Binding Protein (Ssb)
From Bartonella Henselae
gi|315364702|pdb|3PGZ|B Chain B, Crystal Structure Of A Single Strand Binding Protein (Ssb)
From Bartonella Henselae
Length = 193
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 28 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 79
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 80 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 127
>gi|239831868|ref|ZP_04680197.1| single-strand binding protein [Ochrobactrum intermedium LMG 3301]
gi|239824135|gb|EEQ95703.1| single-strand binding protein [Ochrobactrum intermedium LMG 3301]
Length = 195
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 29 VNKVILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQTGERKDRTE--------WHS 80
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 81 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 115
>gi|161617492|ref|YP_001591457.1| hypothetical protein SPAB_05351 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161366856|gb|ABX70624.1| hypothetical protein SPAB_05351 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 183
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKL-KSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K ILVG +GQ P + + S VT FS+ T +++ + + TE W
Sbjct: 5 GINKVILVGHLGQDPEVRYIPNSSTAVTGFSIATSESWRDKQSGDMKEKTE--------W 56
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV ++ +L + ++L GS +Y+EG L + + D G+ R E+ + NG + L
Sbjct: 57 HRVVLFG-KLAEIAGEYLKKGSQVYIEGQLRTRKWTDD-GGVERWTTEVVVGVNGTMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|146291745|ref|YP_001182169.1| single-strand binding protein [Shewanella putrefaciens CN-32]
gi|145563435|gb|ABP74370.1| single-strand binding protein [Shewanella putrefaciens CN-32]
Length = 236
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V ++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ I ++G + L
Sbjct: 56 RVVLF-GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQ-SGQDRYSTEVVIDQSGSMQMLG 113
Query: 199 --GKGGDAQ 205
G+GG AQ
Sbjct: 114 SRGQGGQAQ 122
>gi|331644801|ref|ZP_08345918.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H736]
gi|331650080|ref|ZP_08351153.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli M605]
gi|331680190|ref|ZP_08380849.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H591]
gi|115515464|gb|ABJ03539.1| single strand DNA-binding protein [Escherichia coli APEC O1]
gi|331035776|gb|EGI08014.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H736]
gi|331041025|gb|EGI13182.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli M605]
gi|331071653|gb|EGI42989.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H591]
Length = 197
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 24 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 75
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 76 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 133
Query: 200 --KGGDA 204
+GG A
Sbjct: 134 GRQGGGA 140
>gi|395498931|ref|ZP_10430510.1| single-stranded DNA-binding protein [Pseudomonas sp. PAMC 25886]
gi|395797689|ref|ZP_10476977.1| single-stranded DNA-binding protein [Pseudomonas sp. Ag1]
gi|421139046|ref|ZP_15599092.1| single-strand DNA-binding protein [Pseudomonas fluorescens BBc6R8]
gi|395338057|gb|EJF69910.1| single-stranded DNA-binding protein [Pseudomonas sp. Ag1]
gi|404509769|gb|EKA23693.1| single-strand DNA-binding protein [Pseudomonas fluorescens BBc6R8]
Length = 172
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + L
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEK--DGIKRYTTEIVVDMQGTMQLL 111
>gi|168467974|ref|ZP_02701811.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418801044|ref|ZP_13356685.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|195628932|gb|EDX48334.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392781204|gb|EJA37846.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 178
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G+ P + L + V L T +++ E ++ TE WH
Sbjct: 5 GINKVILVGALGRDPEVRYLPDNKAVASLQLATNESWRDKQTGEMKDKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R EI + + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEIVVGQKGTMQMLG 114
>gi|316934027|ref|YP_004109009.1| ssDNA-binding protein [Rhodopseudomonas palustris DX-1]
gi|315601741|gb|ADU44276.1| single-strand binding protein [Rhodopseudomonas palustris DX-1]
Length = 167
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSETWRDRATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L V ++L G+ +Y+EG L+ + + D +G R E+ ++ N L L
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGQLQTRKWTDQ-SGAERYSTEVVLQNFNSTLTML 114
>gi|452966404|gb|EME71415.1| single-stranded DNA-binding protein [Magnetospirillum sp. SO-1]
Length = 147
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V ++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRTAQNGDKVVNLNIATSETWKDRSTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ L V + L GS++YVEG L+ + + D G + E+ I R G L LG
Sbjct: 57 VVIFNPNLADVAERFLRKGSSVYVEGALQTRKWTDQ-AGQEKYTTEVVIGRFKGVLTLLG 115
Query: 200 KG 201
K
Sbjct: 116 KA 117
>gi|408673659|ref|YP_006873407.1| single-strand binding protein [Emticicia oligotrophica DSM 17448]
gi|387855283|gb|AFK03380.1| single-strand binding protein [Emticicia oligotrophica DSM 17448]
Length = 157
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + L SG V FS+ T NN+ E +WH
Sbjct: 3 GVNKVILLGNLGSDPEVRTLPSGGKVVTFSIATSESYNNKNGERVEQ---------TEWH 53
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R+ ++ + L + ++L G T YVEG + + + D G+ R + IR N + G
Sbjct: 54 RIELW-DNLANIAEQYLKKGDTAYVEGRIRSEKWTDK-DGIERTT--VKIRGNALQLVGG 109
Query: 200 KGGDA 204
+ GDA
Sbjct: 110 RRGDA 114
>gi|410503007|ref|YP_006940062.1| single-stranded DNA-binding protein [Escherichia coli]
gi|417836475|ref|ZP_12482787.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|425281190|ref|ZP_18672329.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|432454204|ref|ZP_19696428.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE193]
gi|433036589|ref|ZP_20224229.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE112]
gi|340730912|gb|EGR60177.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|353233801|emb|CCE21051.1| single-stranded DNA-binding protein [Escherichia coli]
gi|408207538|gb|EKI32272.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|430970958|gb|ELC87982.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE193]
gi|431540166|gb|ELI15794.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE112]
Length = 175
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|15837084|ref|NP_297772.1| single-stranded DNA-binding protein [Xylella fastidiosa 9a5c]
gi|9105333|gb|AAF83292.1|AE003898_4 single-stranded DNA binding protein [Xylella fastidiosa 9a5c]
Length = 148
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R NP E +WH
Sbjct: 4 GINKVILVGNLGNEPEIKYTQSGMTITSISLATSSGRKDREG----NPQE-----RTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF--NDPITGLVRRIREI 187
RV + +LG + +L GS Y+EG + F ND G R + EI
Sbjct: 55 RVKFFG-KLGEIAGDYLHKGSQCYIEGTIRYDKFTGND---GQERYVTEI 100
>gi|145300853|ref|YP_001143694.1| single-strand binding protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418361408|ref|ZP_12962063.1| single-strand binding protein [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142853625|gb|ABO91946.1| single-strand binding protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356687438|gb|EHI52020.1| single-strand binding protein [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 196
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + SG VT +L T +++ E + TE WH
Sbjct: 5 GINKVILIGNLGQDPEVRYMPSGGAVTNITLATSETWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V+ +L V ++L GS +YVEG L+ + + D G R E+ + +G + L
Sbjct: 57 RV-VFMGKLAEVAGEYLKKGSQVYVEGKLQTRKWQD-QGGQERYTTEVLVDSFSGVMQML 114
Query: 199 G---KGGDAQ 205
G +GG Q
Sbjct: 115 GGRPQGGAGQ 124
>gi|237703632|ref|ZP_04534113.1| single strand DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|332280839|ref|ZP_08393252.1| single strand DNA-binding protein [Shigella sp. D9]
gi|91075172|gb|ABE10053.1| single strand DNA-binding protein [Escherichia coli UTI89]
gi|226901544|gb|EEH87803.1| single strand DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|332103191|gb|EGJ06537.1| single strand DNA-binding protein [Shigella sp. D9]
Length = 199
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 26 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 77
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 78 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 135
Query: 200 --KGGDA 204
+GG A
Sbjct: 136 GRQGGGA 142
>gi|75994530|ref|YP_325644.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EDL933]
gi|149930831|ref|YP_001294727.1| single-stranded DNA-binding protein [Escherichia coli]
gi|37695819|gb|AAR00481.1|AF401292_84 w0063 [Escherichia coli]
gi|3822198|gb|AAC70152.1| single strand binding protein [Escherichia coli O157:H7 str.
EDL933]
Length = 163
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + L
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLV 126
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 127 RAAGAQ 132
>gi|227112438|ref|ZP_03826094.1| single-strand DNA-binding protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 180
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G+ R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-SGVERYTTEVVVNVGGTMQML 113
>gi|312964215|ref|ZP_07778527.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|419287261|ref|ZP_13829409.1| ssDNA-binding protein [Escherichia coli DEC10F]
gi|312291043|gb|EFR18916.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|378122766|gb|EHW84193.1| ssDNA-binding protein [Escherichia coli DEC10F]
Length = 162
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 RVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|305667815|ref|YP_003864289.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli]
gi|304655564|emb|CBM42226.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli]
Length = 175
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 K 200
+
Sbjct: 114 R 114
>gi|417536086|ref|ZP_12189355.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|353654966|gb|EHC96110.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
Length = 182
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E TE WH
Sbjct: 6 GVNKVILVGNLGQDPEVRYMPNGGAVANLTLATSESWRDKADGEMREHTE--------WH 57
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ +L + ++L G+ +Y+EG L + + D +G + E+ + +NG + LG
Sbjct: 58 RVVVFG-KLAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVGQNGTMQMLG 115
Query: 200 K 200
+
Sbjct: 116 R 116
>gi|198245309|ref|YP_002214515.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|375117998|ref|ZP_09763165.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|445144307|ref|ZP_21387056.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445150901|ref|ZP_21389967.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|197939825|gb|ACH77158.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326622265|gb|EGE28610.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|444847447|gb|ELX72597.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444856406|gb|ELX81439.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
Length = 168
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G+VGQ P + SG ++ T +++ E + TE WH
Sbjct: 5 GVNKVIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV+V +L VV +++ G +Y EG L + + D TG R EI + NG + LG
Sbjct: 57 RVAVVG-KLAEVVGRYVKKGDQVYFEGMLRTRKWQDQ-TGQDRYTTEINVGINGVMQMLG 114
Query: 200 KGGDAQ 205
GD++
Sbjct: 115 GTGDSK 120
>gi|90020643|ref|YP_526470.1| single-stranded DNA-binding protein [Saccharophagus degradans 2-40]
gi|89950243|gb|ABD80258.1| single-strand binding protein [Saccharophagus degradans 2-40]
Length = 175
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG +GQ P K SG +T S+ T +++ + + TE WH
Sbjct: 5 GVNKVIIVGNLGQDPETKYTASGAAITNVSIATSETWKDKQTGQAQERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ RL + ++L GS +Y+EG L + + D
Sbjct: 57 RV-VFFNRLAEIAGEYLRKGSKVYIEGALRTRKWQD 91
>gi|374575667|ref|ZP_09648763.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM471]
gi|386395139|ref|ZP_10079917.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM1253]
gi|374423988|gb|EHR03521.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM471]
gi|385735765|gb|EIG55961.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM1253]
Length = 165
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSVATSETWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ IYVEG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKIYVEGALQTRKWTD 91
>gi|254418848|ref|ZP_05032572.1| single-strand binding protein [Brevundimonas sp. BAL3]
gi|196185025|gb|EDX80001.1| single-strand binding protein [Brevundimonas sp. BAL3]
Length = 167
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + +G + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRSMPNGDRIANLSIATSETWRDKSSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ + + VV ++ GST+Y+EG L+ + + D G+ + EI + R G L L
Sbjct: 57 VVIFNDNIVKVVENYVKKGSTVYIEGALQTRKWTDQ-QGVEKYSTEIVVSRFKGELTML 114
>gi|50122611|ref|YP_051778.1| single-stranded DNA-binding protein [Pectobacterium atrosepticum
SCRI1043]
gi|49613137|emb|CAG76588.1| single-strand binding protein [Pectobacterium atrosepticum
SCRI1043]
Length = 187
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|375109906|ref|ZP_09756145.1| single-strand binding protein [Alishewanella jeotgali KCTC 22429]
gi|393763400|ref|ZP_10352021.1| single-strand binding protein [Alishewanella agri BL06]
gi|397168964|ref|ZP_10492400.1| single-strand binding protein [Alishewanella aestuarii B11]
gi|374570075|gb|EHR41219.1| single-strand binding protein [Alishewanella jeotgali KCTC 22429]
gi|392605740|gb|EIW88630.1| single-strand binding protein [Alishewanella agri BL06]
gi|396089551|gb|EJI87125.1| single-strand binding protein [Alishewanella aestuarii B11]
Length = 194
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + G V S+ T ++ E + TE WH
Sbjct: 4 GINKVILIGNLGQDPEVRYMPQGGAVANLSIATSESWKDKATGEMKEQTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIA 188
RV +Y +RL + ++L GS +Y+EG L+ + + D G+ R EI
Sbjct: 56 RVVIY-QRLAEIAGEYLRKGSKVYIEGKLKTRKWQDQ-QGVERYTTEIV 102
>gi|221328653|ref|YP_002533495.1| SSB; Single-strand binding protein [Salmonella phage epsilon34]
gi|255252713|ref|YP_003090248.1| ssDNA binding protein [Salmonella phage c341]
gi|409251049|ref|YP_006886854.1| Single-stranded DNA-binding protein 2 SSB 2; Helix-destabilizing
protein 2 [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|418820155|ref|ZP_13375590.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|193244721|gb|ACF16660.1| SSB; Single-strand binding protein [Salmonella phage epsilon34]
gi|223697686|gb|ACN18310.1| ssDNA binding protein [Salmonella phage g341c]
gi|320086877|emb|CBY96648.1| Single-stranded DNA-binding protein 2 SSB 2; Helix-destabilizing
protein 2 [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|392793171|gb|EJA49616.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
Length = 168
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G+VGQ P + SG ++ T +++ E + TE WH
Sbjct: 5 GVNKVIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV+V +L VV +++ G +Y EG L + + D TG R EI + NG + LG
Sbjct: 57 RVAVVG-KLAEVVGQYVKKGDQVYFEGMLRTRKWQDQ-TGQDRYTTEINVGINGVMQMLG 114
Query: 200 KGGDAQ 205
GD++
Sbjct: 115 GTGDSK 120
>gi|191166305|ref|ZP_03028138.1| single-stranded DNA-binding protein [Escherichia coli B7A]
gi|190903732|gb|EDV63448.1| single-stranded DNA-binding protein [Escherichia coli B7A]
Length = 175
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGKLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|422016926|ref|ZP_16363502.1| single-stranded DNA-binding protein [Providencia burhodogranariea
DSM 19968]
gi|414091356|gb|EKT53042.1| single-stranded DNA-binding protein [Providencia burhodogranariea
DSM 19968]
Length = 179
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTGEMREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVIFG-KLAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYSTEVVVNIGGSMQMLG 114
>gi|395781649|ref|ZP_10462067.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
gi|395421082|gb|EJF87340.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
Length = 148
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G P K + SG + F + T +++ + + TE WH +
Sbjct: 4 KVMLIGYLGDDPESKTMTSGVEIVNFRMATSESYTDKKTNQKIDKTE--------WHSIV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V+ L + +++L GS +Y+EG L+ + + D G R EI + + G L L
Sbjct: 56 VFNPHLAKIALQYLSKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLSQYKGELYLL 111
>gi|38638180|ref|NP_943289.1| single-strand DNA-binding protein [Erwinia amylovora]
gi|37682078|gb|AAQ97964.1| Ssb [Erwinia amylovora]
Length = 174
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANLTLATSESWRDKQTGETREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D TG+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-TGVEKYTTEVVVNVGGTMQML 113
>gi|21233779|ref|NP_640077.1| single-strand DNA binding protein [Proteus vulgaris]
gi|37999441|sp|Q8L2A6.1|SSB_PROVU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21202963|dbj|BAB93679.1| single-strand DNA binding protein [Proteus vulgaris]
Length = 195
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VGQ P + + +G V +L T +++ E++ TE WH
Sbjct: 5 GVNKVILVGNVGQDPEVRYMPNGGAVANLTLATSETWRDKQTGESKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + + + GS IY+EG L+ + + D G+ + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEITGEFVKKGSQIYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQMLG 114
>gi|157149468|ref|YP_001451472.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|418825948|ref|ZP_13381204.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|422820209|ref|ZP_16868418.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|422831593|ref|ZP_16879733.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|432444050|ref|ZP_19686367.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|432743835|ref|ZP_19978546.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE23]
gi|157076635|gb|ABV16346.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|371601508|gb|EHN90248.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|385536256|gb|EIF83159.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|392810164|gb|EJA66185.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|430977641|gb|ELC94469.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|431280267|gb|ELF71188.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE23]
Length = 175
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|170723875|ref|YP_001751563.1| single-stranded DNA-binding protein [Pseudomonas putida W619]
gi|169761878|gb|ACA75194.1| single-strand binding protein [Pseudomonas putida W619]
Length = 183
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSMFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLLG 112
>gi|432965041|ref|ZP_20153967.1| single-stranded DNA-binding protein [Escherichia coli KTE203]
gi|431477670|gb|ELH57433.1| single-stranded DNA-binding protein [Escherichia coli KTE203]
Length = 162
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 RVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|389797800|ref|ZP_10200839.1| single stranded DNA-binding protein [Rhodanobacter sp. 116-2]
gi|388446638|gb|EIM02662.1| single stranded DNA-binding protein [Rhodanobacter sp. 116-2]
Length = 169
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +G P + SG TV FSL T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGSDPEVRSTGSGTTVCSFSLATSESWTDKQSGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
R+ ++ RLG + ++L G +Y+EG++ F
Sbjct: 56 RIKIFG-RLGEIAGEYLKKGRQVYIEGSIRTDKF 88
>gi|340029084|ref|ZP_08665147.1| single-strand binding protein [Paracoccus sp. TRP]
Length = 163
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +GQ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGQDPEIRSFQNGGKVANLRIATSESWKDRNTGERRERTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V +Y E L VV + L G+ +YVEG LE + + D +G R E+A+R
Sbjct: 57 VVIYSEPLIRVVEQFLKKGAKVYVEGQLETRKWQDQ-SGNDRYSTEVALR 105
>gi|398800278|ref|ZP_10559551.1| single stranded DNA-binding protein [Pantoea sp. GM01]
gi|398095806|gb|EJL86139.1| single stranded DNA-binding protein [Pantoea sp. GM01]
Length = 184
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQMLG 114
>gi|301030004|ref|ZP_07192975.1| single-strand binding family protein [Escherichia coli MS 196-1]
gi|299877219|gb|EFI85430.1| single-strand binding family protein [Escherichia coli MS 196-1]
Length = 188
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 126
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 127 RAPQQNAQAQP 137
>gi|398843873|ref|ZP_10600990.1| single stranded DNA-binding protein [Pseudomonas sp. GM84]
gi|398255105|gb|EJN40145.1| single stranded DNA-binding protein [Pseudomonas sp. GM84]
Length = 183
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS +Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQVYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLLG 112
>gi|365894363|ref|ZP_09432511.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3843]
gi|365424901|emb|CCE05053.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3843]
Length = 163
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L G+ +Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|253689874|ref|YP_003019064.1| single-strand binding protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756452|gb|ACT14528.1| single-strand binding protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 176
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLHKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|154248236|ref|YP_001419194.1| single-strand binding protein [Xanthobacter autotrophicus Py2]
gi|154162321|gb|ABS69537.1| single-strand binding protein [Xanthobacter autotrophicus Py2]
Length = 180
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P K ++G V S+ T ++ E TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIKSFQNGGRVCNLSVATSENWRDKASGERRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
V ++ E L GV + L GS +Y+EG LE + +
Sbjct: 57 VVIFNENLAGVAERFLKKGSKVYIEGQLETRKY 89
>gi|350571215|ref|ZP_08939549.1| single-strand binding protein [Neisseria wadsworthii 9715]
gi|349792825|gb|EGZ46672.1| single-strand binding protein [Neisseria wadsworthii 9715]
Length = 169
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G++G+ P + + +G V FS+ T N+R+ + TE WH ++
Sbjct: 5 KVILIGRLGRDPEVRYMPNGEAVANFSVATSETWNDRQTGQRVERTE--------WHNIT 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+Y RL + ++L GS +Y+EG ++ + + D TG+ R +I
Sbjct: 57 MY-RRLAEIAGQYLKKGSQVYIEGRIQSRKYTDK-TGVERTAYDI 99
>gi|423713075|ref|ZP_17687335.1| single-stranded DNA-binding protein [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395424701|gb|EJF90881.1| single-stranded DNA-binding protein [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 171
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ E L VV ++L GS IY+EG L+ + + D G R EI +++ G L L G+
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLDGR 117
Query: 201 G 201
G
Sbjct: 118 G 118
>gi|82779525|ref|YP_405874.1| single-stranded DNA-binding protein [Shigella dysenteriae Sd197]
gi|309787555|ref|ZP_07682167.1| single-stranded DNA-binding protein [Shigella dysenteriae 1617]
gi|81243673|gb|ABB64383.1| ssDNA-binding protein [Shigella dysenteriae Sd197]
gi|308925133|gb|EFP70628.1| single-stranded DNA-binding protein [Shigella dysenteriae 1617]
Length = 178
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|395793304|ref|ZP_10472709.1| single-stranded DNA-binding protein [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395431618|gb|EJF97636.1| single-stranded DNA-binding protein [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 171
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ E L VV ++L GS IY+EG L+ + + D G R EI +++ G L L G+
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLDGR 117
Query: 201 G 201
G
Sbjct: 118 G 118
>gi|417626340|ref|ZP_12276623.1| single-stranded DNA-binding protein [Escherichia coli STEC_H.1.8]
gi|345369890|gb|EGX01870.1| single-stranded DNA-binding protein [Escherichia coli STEC_H.1.8]
Length = 188
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|15834295|ref|NP_313068.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
Sakai]
gi|16131885|ref|NP_418483.1| single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|26250861|ref|NP_756901.1| single-stranded DNA-binding protein [Escherichia coli CFT073]
gi|30064648|ref|NP_838819.1| single-stranded DNA-binding protein [Shigella flexneri 2a str.
2457T]
gi|56480523|ref|NP_709860.2| single-stranded DNA-binding protein [Shigella flexneri 2a str. 301]
gi|74314553|ref|YP_312972.1| single-stranded DNA-binding protein [Shigella sonnei Ss046]
gi|82546402|ref|YP_410349.1| single-stranded DNA-binding protein [Shigella boydii Sb227]
gi|110644406|ref|YP_672136.1| single-stranded DNA-binding protein [Escherichia coli 536]
gi|110807924|ref|YP_691444.1| single-stranded DNA-binding protein [Shigella flexneri 5 str. 8401]
gi|157158944|ref|YP_001465559.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|157163528|ref|YP_001460846.1| single-stranded DNA-binding protein [Escherichia coli HS]
gi|162138311|ref|YP_543584.2| single-stranded DNA-binding protein [Escherichia coli UTI89]
gi|162317560|ref|YP_859663.2| single-stranded DNA-binding protein [Escherichia coli APEC O1]
gi|168748095|ref|ZP_02773117.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4113]
gi|168755227|ref|ZP_02780234.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4401]
gi|168760906|ref|ZP_02785913.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4501]
gi|168766317|ref|ZP_02791324.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|168774415|ref|ZP_02799422.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4196]
gi|168780470|ref|ZP_02805477.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4076]
gi|168784673|ref|ZP_02809680.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC869]
gi|168798280|ref|ZP_02823287.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC508]
gi|170021942|ref|YP_001726896.1| single-stranded DNA-binding protein [Escherichia coli ATCC 8739]
gi|170083515|ref|YP_001732835.1| single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. DH10B]
gi|170682295|ref|YP_001746449.1| single-stranded DNA-binding protein [Escherichia coli SMS-3-5]
gi|188492327|ref|ZP_02999597.1| single-stranded DNA-binding protein [Escherichia coli 53638]
gi|191168798|ref|ZP_03030574.1| single-stranded DNA-binding protein [Escherichia coli B7A]
gi|191171973|ref|ZP_03033518.1| single-stranded DNA-binding protein [Escherichia coli F11]
gi|193063066|ref|ZP_03044158.1| single-stranded DNA-binding protein [Escherichia coli E22]
gi|193067881|ref|ZP_03048847.1| single-stranded DNA-binding protein [Escherichia coli E110019]
gi|194426835|ref|ZP_03059388.1| single-stranded DNA-binding protein [Escherichia coli B171]
gi|194432319|ref|ZP_03064607.1| single-stranded DNA-binding protein [Shigella dysenteriae 1012]
gi|194437161|ref|ZP_03069259.1| single-stranded DNA-binding protein [Escherichia coli 101-1]
gi|195935843|ref|ZP_03081225.1| single-strand DNA-binding protein [Escherichia coli O157:H7 str.
EC4024]
gi|208806456|ref|ZP_03248793.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208814008|ref|ZP_03255337.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208818434|ref|ZP_03258754.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209397137|ref|YP_002273599.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|209921544|ref|YP_002295628.1| single-stranded DNA-binding protein [Escherichia coli SE11]
gi|215489405|ref|YP_002331836.1| single-stranded DNA-binding protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217324655|ref|ZP_03440739.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|218551380|ref|YP_002385172.1| single-stranded DNA-binding protein [Escherichia fergusonii ATCC
35469]
gi|218556617|ref|YP_002389531.1| single-stranded DNA-binding protein [Escherichia coli IAI1]
gi|218561142|ref|YP_002394055.1| single-stranded DNA-binding protein [Escherichia coli S88]
gi|218692349|ref|YP_002400561.1| single-stranded DNA-binding protein [Escherichia coli ED1a]
gi|218697768|ref|YP_002405435.1| single-stranded DNA-binding protein [Escherichia coli 55989]
gi|218702724|ref|YP_002410353.1| single-stranded DNA-binding protein [Escherichia coli IAI39]
gi|218707681|ref|YP_002415200.1| single-stranded DNA-binding protein [Escherichia coli UMN026]
gi|222158775|ref|YP_002558914.1| Single-stranded DNA-binding protein [Escherichia coli LF82]
gi|227886919|ref|ZP_04004724.1| single-stranded DNA-binding protein [Escherichia coli 83972]
gi|238903169|ref|YP_002928965.1| single-stranded DNA-binding protein [Escherichia coli BW2952]
gi|251787314|ref|YP_003001618.1| ssDNA-binding protein [Escherichia coli BL21(DE3)]
gi|253775312|ref|YP_003038143.1| single-stranded DNA-binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163995|ref|YP_003047103.1| single-stranded DNA-binding protein [Escherichia coli B str.
REL606]
gi|254290745|ref|YP_003056493.1| single-strand DNA-binding protein [Escherichia coli BL21(DE3)]
gi|254796079|ref|YP_003080916.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|260846854|ref|YP_003224632.1| single-stranded DNA-binding protein [Escherichia coli O103:H2 str.
12009]
gi|260858170|ref|YP_003232061.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
11368]
gi|260870819|ref|YP_003237221.1| single-stranded DNA-binding protein [Escherichia coli O111:H- str.
11128]
gi|261225178|ref|ZP_05939459.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255570|ref|ZP_05948103.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK966]
gi|291285476|ref|YP_003502294.1| Single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
CB9615]
gi|293402698|ref|ZP_06646795.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|293407792|ref|ZP_06651632.1| single-stranded DNA-binding protein [Escherichia coli B354]
gi|293417564|ref|ZP_06660186.1| single-stranded DNA-binding protein [Escherichia coli B185]
gi|293476364|ref|ZP_06664772.1| single-stranded DNA-binding protein [Escherichia coli B088]
gi|297519588|ref|ZP_06937974.1| single-stranded DNA-binding protein [Escherichia coli OP50]
gi|298378227|ref|ZP_06988111.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|300817978|ref|ZP_07098191.1| single-strand binding family protein [Escherichia coli MS 107-1]
gi|300823601|ref|ZP_07103729.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|300899822|ref|ZP_07118037.1| single-strand binding family protein [Escherichia coli MS 198-1]
gi|300906371|ref|ZP_07124069.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|300917291|ref|ZP_07133965.1| single-strand binding family protein [Escherichia coli MS 115-1]
gi|300924323|ref|ZP_07140302.1| single-strand binding family protein [Escherichia coli MS 182-1]
gi|300929802|ref|ZP_07145253.1| single-strand binding family protein [Escherichia coli MS 187-1]
gi|300938201|ref|ZP_07152969.1| single-strand binding family protein [Escherichia coli MS 21-1]
gi|300946635|ref|ZP_07160893.1| single-strand binding family protein [Escherichia coli MS 116-1]
gi|300957528|ref|ZP_07169736.1| single-strand binding family protein [Escherichia coli MS 175-1]
gi|300980260|ref|ZP_07174918.1| single-strand binding family protein [Escherichia coli MS 200-1]
gi|300993022|ref|ZP_07180145.1| single-strand binding family protein [Escherichia coli MS 45-1]
gi|301019199|ref|ZP_07183397.1| single-strand binding family protein [Escherichia coli MS 196-1]
gi|301021590|ref|ZP_07185588.1| single-strand binding family protein [Escherichia coli MS 69-1]
gi|301047027|ref|ZP_07194134.1| single-strand binding family protein [Escherichia coli MS 185-1]
gi|301302740|ref|ZP_07208869.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|301330566|ref|ZP_07223175.1| single-strand binding family protein [Escherichia coli MS 78-1]
gi|301645049|ref|ZP_07245012.1| single-strand binding family protein [Escherichia coli MS 146-1]
gi|306815821|ref|ZP_07449966.1| single-stranded DNA-binding protein [Escherichia coli NC101]
gi|307312099|ref|ZP_07591736.1| single-strand binding protein [Escherichia coli W]
gi|309795866|ref|ZP_07690280.1| single-strand binding family protein [Escherichia coli MS 145-7]
gi|312965665|ref|ZP_07779894.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|312974145|ref|ZP_07788316.1| single-stranded DNA-binding protein [Escherichia coli 1827-70]
gi|331655881|ref|ZP_08356869.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli M718]
gi|331660636|ref|ZP_08361568.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA206]
gi|331665729|ref|ZP_08366623.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA143]
gi|331670923|ref|ZP_08371757.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA271]
gi|331675591|ref|ZP_08376338.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA280]
gi|331680990|ref|ZP_08381627.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H299]
gi|366158968|ref|ZP_09458830.1| single-stranded DNA-binding protein [Escherichia sp. TW09308]
gi|378714992|ref|YP_005279885.1| single-strand binding protein [Escherichia coli KO11FL]
gi|383181374|ref|YP_005459379.1| single-stranded DNA-binding protein [Shigella sonnei 53G]
gi|386278669|ref|ZP_10056363.1| single-stranded DNA-binding protein [Escherichia sp. 4_1_40B]
gi|386597422|ref|YP_006093822.1| single-strand binding protein [Escherichia coli DH1]
gi|386602116|ref|YP_006103622.1| single-stranded DNA-binding protein [Escherichia coli IHE3034]
gi|386606638|ref|YP_006112938.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|386611466|ref|YP_006126952.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|386616891|ref|YP_006136557.1| single-stranded DNA-binding protein [Escherichia coli UMNK88]
gi|386621769|ref|YP_006141349.1| ssDNA-binding protein [Escherichia coli NA114]
gi|386627002|ref|YP_006146730.1| single-stranded DNA-binding protein [Escherichia coli O7:K1 str.
CE10]
gi|386632051|ref|YP_006151771.1| single-stranded DNA-binding protein [Escherichia coli str. 'clone D
i2']
gi|386636971|ref|YP_006156690.1| single-stranded DNA-binding protein [Escherichia coli str. 'clone D
i14']
gi|386641728|ref|YP_006108526.1| single-strand binding protein [Escherichia coli ABU 83972]
gi|386698918|ref|YP_006162755.1| single-stranded DNA-binding protein [Escherichia coli KO11FL]
gi|386707300|ref|YP_006171147.1| ssDNA-binding protein [Escherichia coli P12b]
gi|386712008|ref|YP_006175729.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|387509514|ref|YP_006161770.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
RM12579]
gi|387609853|ref|YP_006098709.1| ssDNA-binding protein [Escherichia coli 042]
gi|387614790|ref|YP_006117906.1| ssDNA-binding protein [Escherichia coli ETEC H10407]
gi|387619384|ref|YP_006122406.1| single-stranded DNA-binding protein [Escherichia coli O83:H1 str.
NRG 857C]
gi|387623690|ref|YP_006131318.1| ssDNA-binding protein [Escherichia coli DH1]
gi|387831982|ref|YP_003351919.1| single-strand DNA-binding protein [Escherichia coli SE15]
gi|387885284|ref|YP_006315586.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|388480008|ref|YP_492202.1| Single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. W3110]
gi|404372980|ref|ZP_10978255.1| single-stranded DNA-binding protein [Escherichia sp. 1_1_43]
gi|407467068|ref|YP_006786490.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407484210|ref|YP_006781360.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484756|ref|YP_006772302.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414578924|ref|ZP_11436082.1| single-stranded DNA-binding protein [Shigella sonnei 3233-85]
gi|415775781|ref|ZP_11487465.1| single-stranded DNA-binding protein [Escherichia coli 3431]
gi|415785052|ref|ZP_11492718.1| single-stranded DNA-binding protein [Escherichia coli EPECa14]
gi|415814127|ref|ZP_11505757.1| single-stranded DNA-binding protein [Escherichia coli LT-68]
gi|415823447|ref|ZP_11511822.1| single-stranded DNA-binding protein [Escherichia coli OK1180]
gi|415831890|ref|ZP_11517441.1| single-stranded DNA-binding protein [Escherichia coli OK1357]
gi|415838147|ref|ZP_11520130.1| single-stranded DNA-binding protein [Escherichia coli RN587/1]
gi|415851818|ref|ZP_11528388.1| single-stranded DNA-binding protein [Shigella sonnei 53G]
gi|415857045|ref|ZP_11531874.1| single-stranded DNA-binding protein [Shigella flexneri 2a str.
2457T]
gi|415864660|ref|ZP_11537684.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|415874349|ref|ZP_11541403.1| single-strand binding protein [Escherichia coli MS 79-10]
gi|416263970|ref|ZP_11640878.1| Single-stranded DNA-binding protein [Shigella dysenteriae CDC
74-1112]
gi|416286025|ref|ZP_11648123.1| Single-stranded DNA-binding protein [Shigella boydii ATCC 9905]
gi|416305171|ref|ZP_11654189.1| Single-stranded DNA-binding protein [Shigella flexneri CDC 796-83]
gi|416308849|ref|ZP_11655302.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|416319458|ref|ZP_11662010.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|416328413|ref|ZP_11668173.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|416338815|ref|ZP_11674816.1| Single-stranded DNA-binding protein [Escherichia coli WV_060327]
gi|416343427|ref|ZP_11677431.1| Single-stranded DNA-binding protein [Escherichia coli EC4100B]
gi|416779344|ref|ZP_11876349.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
G5101]
gi|416790541|ref|ZP_11881238.1| single-stranded DNA-binding protein [Escherichia coli O157:H- str.
493-89]
gi|416802342|ref|ZP_11886127.1| single-stranded DNA-binding protein [Escherichia coli O157:H- str.
H 2687]
gi|416813166|ref|ZP_11891065.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
3256-97]
gi|416823678|ref|ZP_11895667.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
USDA 5905]
gi|416833974|ref|ZP_11900663.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
LSU-61]
gi|416900752|ref|ZP_11929921.1| single-stranded DNA-binding protein [Escherichia coli STEC_7v]
gi|417088189|ref|ZP_11954918.1| single strand DNA-binding protein [Escherichia coli cloneA_i1]
gi|417116478|ref|ZP_11967339.1| single-stranded DNA-binding protein [Escherichia coli 1.2741]
gi|417127779|ref|ZP_11975219.1| single-stranded DNA-binding protein [Escherichia coli 97.0246]
gi|417132238|ref|ZP_11977023.1| single-stranded DNA-binding protein [Escherichia coli 5.0588]
gi|417141696|ref|ZP_11984548.1| single-stranded DNA-binding protein [Escherichia coli 97.0259]
gi|417148935|ref|ZP_11989026.1| single-stranded DNA-binding protein [Escherichia coli 1.2264]
gi|417157984|ref|ZP_11995608.1| single-stranded DNA-binding protein [Escherichia coli 96.0497]
gi|417167382|ref|ZP_12000268.1| single-stranded DNA-binding protein [Escherichia coli 99.0741]
gi|417174509|ref|ZP_12004305.1| single-stranded DNA-binding protein [Escherichia coli 3.2608]
gi|417187224|ref|ZP_12012081.1| single-stranded DNA-binding protein [Escherichia coli 93.0624]
gi|417201005|ref|ZP_12017689.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|417206201|ref|ZP_12019279.1| single-stranded DNA-binding protein [Escherichia coli JB1-95]
gi|417224160|ref|ZP_12027451.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
gi|417230601|ref|ZP_12032098.1| single-stranded DNA-binding protein [Escherichia coli 5.0959]
gi|417238781|ref|ZP_12036205.1| single-stranded DNA-binding protein [Escherichia coli 9.0111]
gi|417249251|ref|ZP_12041035.1| single-stranded DNA-binding protein [Escherichia coli 4.0967]
gi|417261078|ref|ZP_12048571.1| single-stranded DNA-binding protein [Escherichia coli 2.3916]
gi|417268605|ref|ZP_12055965.1| single-stranded DNA-binding protein [Escherichia coli 3.3884]
gi|417273850|ref|ZP_12061195.1| single-stranded DNA-binding protein [Escherichia coli 2.4168]
gi|417279725|ref|ZP_12067030.1| single-stranded DNA-binding protein [Escherichia coli 3.2303]
gi|417282354|ref|ZP_12069654.1| single-stranded DNA-binding protein [Escherichia coli 3003]
gi|417287905|ref|ZP_12075191.1| single-stranded DNA-binding protein [Escherichia coli TW07793]
gi|417293464|ref|ZP_12080743.1| single-stranded DNA-binding protein [Escherichia coli B41]
gi|417295729|ref|ZP_12082976.1| single-stranded DNA-binding protein [Escherichia coli 900105 (10e)]
gi|417310672|ref|ZP_12097482.1| Single-stranded DNA-binding protein [Escherichia coli PCN033]
gi|417583732|ref|ZP_12234526.1| single-stranded DNA-binding protein [Escherichia coli STEC_B2F1]
gi|417584469|ref|ZP_12235253.1| single-stranded DNA-binding protein [Escherichia coli STEC_C165-02]
gi|417594596|ref|ZP_12245281.1| single-stranded DNA-binding protein [Escherichia coli 2534-86]
gi|417599506|ref|ZP_12250124.1| single-stranded DNA-binding protein [Escherichia coli 3030-1]
gi|417605029|ref|ZP_12255586.1| single-stranded DNA-binding protein [Escherichia coli STEC_94C]
gi|417610843|ref|ZP_12261328.1| single-stranded DNA-binding protein [Escherichia coli STEC_DG131-3]
gi|417620757|ref|ZP_12271153.1| single-stranded DNA-binding protein [Escherichia coli G58-1]
gi|417637022|ref|ZP_12287223.1| single-stranded DNA-binding protein [Escherichia coli STEC_S1191]
gi|417642096|ref|ZP_12292218.1| single-stranded DNA-binding protein [Escherichia coli TX1999]
gi|417664720|ref|ZP_12314299.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|417669688|ref|ZP_12319217.1| single-stranded DNA-binding protein [Escherichia coli STEC_O31]
gi|417675396|ref|ZP_12324819.1| single-stranded DNA-binding protein [Shigella dysenteriae 155-74]
gi|417684825|ref|ZP_12334158.1| single-stranded DNA-binding protein [Shigella boydii 3594-74]
gi|417692552|ref|ZP_12341746.1| single-stranded DNA-binding protein [Shigella boydii 5216-82]
gi|417704162|ref|ZP_12353265.1| single-stranded DNA-binding protein [Shigella flexneri K-218]
gi|417714407|ref|ZP_12363363.1| single-stranded DNA-binding protein [Shigella flexneri K-272]
gi|417719238|ref|ZP_12368125.1| single-stranded DNA-binding protein [Shigella flexneri K-227]
gi|417725048|ref|ZP_12373840.1| single-stranded DNA-binding protein [Shigella flexneri K-304]
gi|417730322|ref|ZP_12379011.1| single-stranded DNA-binding protein [Shigella flexneri K-671]
gi|417735501|ref|ZP_12384143.1| single-stranded DNA-binding protein [Shigella flexneri 2747-71]
gi|417740182|ref|ZP_12388753.1| single-stranded DNA-binding protein [Shigella flexneri 4343-70]
gi|417745270|ref|ZP_12393790.1| ssDNA-binding protein [Shigella flexneri 2930-71]
gi|417758573|ref|ZP_12406628.1| ssDNA-binding protein [Escherichia coli DEC2B]
gi|417807760|ref|ZP_12454686.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
LB226692]
gi|417830671|ref|ZP_12477206.1| ssDNA-binding protein [Shigella flexneri J1713]
gi|417835501|ref|ZP_12481940.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|417867560|ref|ZP_12512596.1| hypothetical protein C22711_4487 [Escherichia coli O104:H4 str.
C227-11]
gi|417944837|ref|ZP_12588076.1| single-stranded DNA-binding protein [Escherichia coli XH140A]
gi|418040043|ref|ZP_12678295.1| single-stranded DNA-binding protein [Escherichia coli W26]
gi|418258896|ref|ZP_12882022.1| ssDNA-binding protein [Shigella flexneri 6603-63]
gi|418270672|ref|ZP_12888433.1| ssDNA-binding protein [Shigella sonnei str. Moseley]
gi|418305690|ref|ZP_12917484.1| single-stranded DNA-binding protein [Escherichia coli UMNF18]
gi|418943019|ref|ZP_13496249.1| single-stranded DNA-binding protein [Escherichia coli O157:H43 str.
T22]
gi|418960057|ref|ZP_13511952.1| single-stranded DNA-binding protein [Escherichia coli J53]
gi|418999907|ref|ZP_13547477.1| ssDNA-binding protein [Escherichia coli DEC1A]
gi|419004971|ref|ZP_13552473.1| ssDNA-binding protein [Escherichia coli DEC1B]
gi|419010624|ref|ZP_13558025.1| ssDNA-binding protein [Escherichia coli DEC1C]
gi|419011228|ref|ZP_13558598.1| single-stranded DNA-binding protein [Escherichia coli DEC1D]
gi|419021276|ref|ZP_13568566.1| ssDNA-binding protein [Escherichia coli DEC1E]
gi|419026745|ref|ZP_13573951.1| single-stranded DNA-binding protein [Escherichia coli DEC2A]
gi|419031889|ref|ZP_13579021.1| ssDNA-binding protein [Escherichia coli DEC2C]
gi|419037493|ref|ZP_13584559.1| ssDNA-binding protein [Escherichia coli DEC2D]
gi|419042580|ref|ZP_13589589.1| ssDNA-binding protein [Escherichia coli DEC2E]
gi|419048126|ref|ZP_13595052.1| ssDNA-binding protein [Escherichia coli DEC3A]
gi|419053925|ref|ZP_13600788.1| ssDNA-binding protein [Escherichia coli DEC3B]
gi|419059992|ref|ZP_13606786.1| ssDNA-binding protein [Escherichia coli DEC3C]
gi|419065353|ref|ZP_13612057.1| ssDNA-binding protein [Escherichia coli DEC3D]
gi|419072352|ref|ZP_13617945.1| ssDNA-binding protein [Escherichia coli DEC3E]
gi|419078333|ref|ZP_13623824.1| ssDNA-binding protein [Escherichia coli DEC3F]
gi|419083394|ref|ZP_13628832.1| ssDNA-binding protein [Escherichia coli DEC4A]
gi|419089401|ref|ZP_13634745.1| ssDNA-binding protein [Escherichia coli DEC4B]
gi|419095788|ref|ZP_13641057.1| ssDNA-binding protein [Escherichia coli DEC4C]
gi|419101189|ref|ZP_13646370.1| ssDNA-binding protein [Escherichia coli DEC4D]
gi|419106677|ref|ZP_13651793.1| ssDNA-binding protein [Escherichia coli DEC4E]
gi|419112125|ref|ZP_13657170.1| ssDNA-binding protein [Escherichia coli DEC4F]
gi|419117646|ref|ZP_13662648.1| ssDNA-binding protein [Escherichia coli DEC5A]
gi|419123426|ref|ZP_13668361.1| ssDNA-binding protein [Escherichia coli DEC5B]
gi|419128894|ref|ZP_13673757.1| ssDNA-binding protein [Escherichia coli DEC5C]
gi|419134269|ref|ZP_13679087.1| ssDNA-binding protein [Escherichia coli DEC5D]
gi|419139495|ref|ZP_13684279.1| single-stranded DNA-binding protein [Escherichia coli DEC5E]
gi|419145183|ref|ZP_13689904.1| single-stranded DNA-binding protein [Escherichia coli DEC6A]
gi|419151031|ref|ZP_13695673.1| ssDNA-binding protein [Escherichia coli DEC6B]
gi|419156593|ref|ZP_13701141.1| single-stranded DNA-binding protein [Escherichia coli DEC6C]
gi|419161946|ref|ZP_13706432.1| single-stranded DNA-binding protein [Escherichia coli DEC6D]
gi|419167034|ref|ZP_13711476.1| ssDNA-binding protein [Escherichia coli DEC6E]
gi|419173050|ref|ZP_13716916.1| single-stranded DNA-binding protein [Escherichia coli DEC7A]
gi|419177800|ref|ZP_13721600.1| ssDNA-binding protein [Escherichia coli DEC7B]
gi|419183625|ref|ZP_13727205.1| ssDNA-binding protein [Escherichia coli DEC7C]
gi|419189224|ref|ZP_13732721.1| ssDNA-binding protein [Escherichia coli DEC7D]
gi|419194356|ref|ZP_13737790.1| single-stranded DNA-binding protein [Escherichia coli DEC7E]
gi|419199888|ref|ZP_13743169.1| single-stranded DNA-binding protein [Escherichia coli DEC8A]
gi|419206274|ref|ZP_13749421.1| ssDNA-binding protein [Escherichia coli DEC8B]
gi|419212654|ref|ZP_13755709.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|419218462|ref|ZP_13761446.1| ssDNA-binding protein [Escherichia coli DEC8D]
gi|419224214|ref|ZP_13767119.1| ssDNA-binding protein [Escherichia coli DEC8E]
gi|419229776|ref|ZP_13772603.1| ssDNA-binding protein [Escherichia coli DEC9A]
gi|419235311|ref|ZP_13778069.1| ssDNA-binding protein [Escherichia coli DEC9B]
gi|419240596|ref|ZP_13783294.1| ssDNA-binding protein [Escherichia coli DEC9C]
gi|419246289|ref|ZP_13788913.1| ssDNA-binding protein [Escherichia coli DEC9D]
gi|419252018|ref|ZP_13794579.1| ssDNA-binding protein [Escherichia coli DEC9E]
gi|419257793|ref|ZP_13800285.1| ssDNA-binding protein [Escherichia coli DEC10A]
gi|419263971|ref|ZP_13806372.1| ssDNA-binding protein [Escherichia coli DEC10B]
gi|419270204|ref|ZP_13812543.1| ssDNA-binding protein [Escherichia coli DEC10C]
gi|419275449|ref|ZP_13817731.1| ssDNA-binding protein [Escherichia coli DEC10D]
gi|419280857|ref|ZP_13823090.1| ssDNA-binding protein [Escherichia coli DEC10E]
gi|419287047|ref|ZP_13829201.1| ssDNA-binding protein [Escherichia coli DEC10F]
gi|419292296|ref|ZP_13834374.1| ssDNA-binding protein [Escherichia coli DEC11A]
gi|419297647|ref|ZP_13839676.1| ssDNA-binding protein [Escherichia coli DEC11B]
gi|419303111|ref|ZP_13845097.1| single-stranded DNA-binding protein [Escherichia coli DEC11C]
gi|419309156|ref|ZP_13851040.1| single-stranded DNA-binding protein [Escherichia coli DEC11D]
gi|419314115|ref|ZP_13855967.1| single-stranded DNA-binding protein [Escherichia coli DEC11E]
gi|419319643|ref|ZP_13861433.1| single-stranded DNA-binding protein [Escherichia coli DEC12A]
gi|419325909|ref|ZP_13867587.1| ssDNA-binding protein [Escherichia coli DEC12B]
gi|419331789|ref|ZP_13873375.1| single-stranded DNA-binding protein [Escherichia coli DEC12C]
gi|419337342|ref|ZP_13878845.1| ssDNA-binding protein [Escherichia coli DEC12D]
gi|419342695|ref|ZP_13884141.1| ssDNA-binding protein [Escherichia coli DEC12E]
gi|419347912|ref|ZP_13889272.1| ssDNA-binding protein [Escherichia coli DEC13A]
gi|419352364|ref|ZP_13893685.1| ssDNA-binding protein [Escherichia coli DEC13B]
gi|419357850|ref|ZP_13899089.1| ssDNA-binding protein [Escherichia coli DEC13C]
gi|419362808|ref|ZP_13904008.1| ssDNA-binding protein [Escherichia coli DEC13D]
gi|419367953|ref|ZP_13909092.1| ssDNA-binding protein [Escherichia coli DEC13E]
gi|419372715|ref|ZP_13913814.1| single-stranded DNA-binding protein [Escherichia coli DEC14A]
gi|419378325|ref|ZP_13919333.1| ssDNA-binding protein [Escherichia coli DEC14B]
gi|419383663|ref|ZP_13924594.1| ssDNA-binding protein [Escherichia coli DEC14C]
gi|419394396|ref|ZP_13935187.1| ssDNA-binding protein [Escherichia coli DEC15A]
gi|419399529|ref|ZP_13940283.1| ssDNA-binding protein [Escherichia coli DEC15B]
gi|419404772|ref|ZP_13945483.1| ssDNA-binding protein [Escherichia coli DEC15C]
gi|419409932|ref|ZP_13950611.1| ssDNA-binding protein [Escherichia coli DEC15D]
gi|419415498|ref|ZP_13956124.1| ssDNA-binding protein [Escherichia coli DEC15E]
gi|419702935|ref|ZP_14230517.1| single-stranded DNA-binding protein [Escherichia coli SCI-07]
gi|419805720|ref|ZP_14330849.1| single-stranded DNA-binding protein [Escherichia coli AI27]
gi|419812612|ref|ZP_14337476.1| single-stranded DNA-binding protein [Escherichia coli O32:H37 str.
P4]
gi|419863056|ref|ZP_14385617.1| single-stranded DNA-binding protein [Escherichia coli O103:H25 str.
CVM9340]
gi|419872891|ref|ZP_14394906.1| single-stranded DNA-binding protein [Escherichia coli O103:H2 str.
CVM9450]
gi|419874386|ref|ZP_14396322.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9534]
gi|419884770|ref|ZP_14405647.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9545]
gi|419889331|ref|ZP_14409749.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|419893886|ref|ZP_14413837.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9574]
gi|419902444|ref|ZP_14421659.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9942]
gi|419909770|ref|ZP_14428308.1| single-strand binding protein [Escherichia coli O26:H11 str.
CVM10026]
gi|419913157|ref|ZP_14431600.1| single-stranded DNA-binding protein [Escherichia coli KD1]
gi|419919478|ref|ZP_14437630.1| single-stranded DNA-binding protein [Escherichia coli KD2]
gi|419925933|ref|ZP_14443751.1| single-stranded DNA-binding protein [Escherichia coli 541-15]
gi|419929972|ref|ZP_14447636.1| single-stranded DNA-binding protein [Escherichia coli 541-1]
gi|419935796|ref|ZP_14452864.1| single-stranded DNA-binding protein [Escherichia coli 576-1]
gi|419938230|ref|ZP_14455070.1| single-stranded DNA-binding protein [Escherichia coli 75]
gi|419943111|ref|ZP_14459681.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|419951002|ref|ZP_14467202.1| single-stranded DNA-binding protein [Escherichia coli CUMT8]
gi|420089141|ref|ZP_14600978.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9602]
gi|420094970|ref|ZP_14606516.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
gi|420099524|ref|ZP_14610748.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9455]
gi|420107638|ref|ZP_14617960.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|420112414|ref|ZP_14622213.1| hypothetical protein ECO10021_28380 [Escherichia coli O26:H11 str.
CVM10021]
gi|420122264|ref|ZP_14631252.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM10030]
gi|420126343|ref|ZP_14635079.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM10224]
gi|420130451|ref|ZP_14638943.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|420272680|ref|ZP_14775022.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|420278235|ref|ZP_14780508.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|420283476|ref|ZP_14785701.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|420284260|ref|ZP_14786480.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|420295254|ref|ZP_14797358.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|420301169|ref|ZP_14803207.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|420301840|ref|ZP_14803875.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|420312473|ref|ZP_14814394.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|420318383|ref|ZP_14820245.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|420322326|ref|ZP_14824148.1| single-stranded DNA-binding protein [Shigella flexneri 2850-71]
gi|420327507|ref|ZP_14829251.1| single-stranded DNA-binding protein [Shigella flexneri CCH060]
gi|420338056|ref|ZP_14839617.1| single-stranded DNA-binding protein [Shigella flexneri K-315]
gi|420343723|ref|ZP_14845187.1| single-stranded DNA-binding protein [Shigella flexneri K-404]
gi|420350239|ref|ZP_14851596.1| single-stranded DNA-binding protein [Shigella boydii 965-58]
gi|420355708|ref|ZP_14856764.1| single-stranded DNA-binding protein [Shigella boydii 4444-74]
gi|420361466|ref|ZP_14862403.1| single-stranded DNA-binding protein [Shigella sonnei 3226-85]
gi|420366117|ref|ZP_14866970.1| ssDNA-binding protein [Shigella sonnei 4822-66]
gi|420377854|ref|ZP_14877406.1| single-stranded DNA-binding protein [Shigella flexneri 1235-66]
gi|420383406|ref|ZP_14882820.1| single-stranded DNA-binding protein [Shigella dysenteriae 225-75]
gi|420388448|ref|ZP_14887774.1| single-stranded DNA-binding protein [Escherichia coli EPECa12]
gi|420394220|ref|ZP_14893457.1| ssDNA-binding protein [Escherichia coli EPEC C342-62]
gi|421684525|ref|ZP_16124310.1| ssDNA-binding protein [Shigella flexneri 1485-80]
gi|421777208|ref|ZP_16213806.1| single-stranded DNA-binding protein [Escherichia coli AD30]
gi|421815170|ref|ZP_16250862.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|421820917|ref|ZP_16256394.1| single-stranded DNA-binding protein [Escherichia coli 10.0821]
gi|421826975|ref|ZP_16262321.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|421827927|ref|ZP_16263259.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|422331505|ref|ZP_16412521.1| single-stranded DNA-binding protein [Escherichia coli 4_1_47FAA]
gi|422354920|ref|ZP_16435645.1| single-strand binding family protein [Escherichia coli MS 117-3]
gi|422358315|ref|ZP_16438975.1| single-strand binding family protein [Escherichia coli MS 110-3]
gi|422365744|ref|ZP_16446234.1| single-strand binding family protein [Escherichia coli MS 153-1]
gi|422370742|ref|ZP_16451131.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|422373803|ref|ZP_16454101.1| single-strand binding family protein [Escherichia coli MS 60-1]
gi|422381010|ref|ZP_16461181.1| single-strand binding family protein [Escherichia coli MS 57-2]
gi|422751048|ref|ZP_16804958.1| single-strand binding protein [Escherichia coli H252]
gi|422757163|ref|ZP_16810984.1| single-strand binding protein [Escherichia coli H263]
gi|422761378|ref|ZP_16815136.1| single-strand binding protein [Escherichia coli E1167]
gi|422767933|ref|ZP_16821658.1| single-strand binding protein [Escherichia coli E1520]
gi|422772617|ref|ZP_16826304.1| single-strand binding protein [Escherichia coli E482]
gi|422776262|ref|ZP_16829916.1| single-strand binding protein [Escherichia coli H120]
gi|422783584|ref|ZP_16836368.1| single-strand binding protein [Escherichia coli TW10509]
gi|422787908|ref|ZP_16840645.1| single-strand binding protein [Escherichia coli H489]
gi|422793640|ref|ZP_16846335.1| single-strand binding protein [Escherichia coli TA007]
gi|422801779|ref|ZP_16850274.1| single-strand binding protein [Escherichia coli M863]
gi|422807117|ref|ZP_16855548.1| single-strand binding protein [Escherichia fergusonii B253]
gi|422815595|ref|ZP_16863810.1| single-stranded DNA-binding protein [Escherichia coli M919]
gi|422829134|ref|ZP_16877302.1| single-stranded DNA-binding protein [Escherichia coli B093]
gi|422832667|ref|ZP_16880736.1| single-stranded DNA-binding protein [Escherichia coli E101]
gi|422840485|ref|ZP_16888456.1| single-stranded DNA-binding protein [Escherichia coli H397]
gi|422958032|ref|ZP_16970246.1| single-stranded DNA-binding protein [Escherichia coli H494]
gi|422972558|ref|ZP_16975385.1| single-stranded DNA-binding protein [Escherichia coli TA124]
gi|422990325|ref|ZP_16981097.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
C227-11]
gi|422997221|ref|ZP_16987983.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
C236-11]
gi|423002317|ref|ZP_16993068.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
09-7901]
gi|423005973|ref|ZP_16996718.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
04-8351]
gi|423012536|ref|ZP_17003266.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-3677]
gi|423021767|ref|ZP_17012471.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4404]
gi|423026921|ref|ZP_17017615.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4522]
gi|423032750|ref|ZP_17023436.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4623]
gi|423035626|ref|ZP_17026302.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423040745|ref|ZP_17031413.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047431|ref|ZP_17038089.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423055969|ref|ZP_17044775.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423057974|ref|ZP_17046772.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423703610|ref|ZP_17678042.1| single-stranded DNA-binding protein [Escherichia coli H730]
gi|423708375|ref|ZP_17682755.1| single-stranded DNA-binding protein [Escherichia coli B799]
gi|423728363|ref|ZP_17702100.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|424080417|ref|ZP_17817348.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|424086826|ref|ZP_17823286.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|424093243|ref|ZP_17829142.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|424099937|ref|ZP_17835160.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|424106135|ref|ZP_17840834.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|424112745|ref|ZP_17846949.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|424118697|ref|ZP_17852506.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|424131060|ref|ZP_17863938.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|424137380|ref|ZP_17869788.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|424143917|ref|ZP_17875743.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|424150280|ref|ZP_17881633.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|424168434|ref|ZP_17887071.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|424259349|ref|ZP_17892611.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|424336367|ref|ZP_17898548.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|424452625|ref|ZP_17904238.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|424458786|ref|ZP_17909856.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|424465341|ref|ZP_17915624.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|424471563|ref|ZP_17921335.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|424478033|ref|ZP_17927326.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|424483835|ref|ZP_17932790.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|424490031|ref|ZP_17938539.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|424496751|ref|ZP_17944230.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|424503350|ref|ZP_17950209.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|424509625|ref|ZP_17955964.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|424517040|ref|ZP_17961591.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|424523158|ref|ZP_17967235.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|424529007|ref|ZP_17972697.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|424535149|ref|ZP_17978476.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|424541255|ref|ZP_17984175.1| single-stranded DNA-binding protein [Escherichia coli EC4013]
gi|424547406|ref|ZP_17989706.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|424553604|ref|ZP_17995404.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|424559802|ref|ZP_18001170.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|424566124|ref|ZP_18007102.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|424572254|ref|ZP_18012761.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|424578412|ref|ZP_18018419.1| single-stranded DNA-binding protein [Escherichia coli EC1845]
gi|424584233|ref|ZP_18023855.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|424751364|ref|ZP_18179394.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424758040|ref|ZP_18185762.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424773304|ref|ZP_18200367.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424818629|ref|ZP_18243780.1| Ssb [Escherichia fergusonii ECD227]
gi|424840295|ref|ZP_18264932.1| single-stranded DNA-binding protein [Shigella flexneri 5a str.
M90T]
gi|425100887|ref|ZP_18503602.1| single-stranded DNA-binding protein [Escherichia coli 3.4870]
gi|425106983|ref|ZP_18509272.1| single-stranded DNA-binding protein [Escherichia coli 5.2239]
gi|425112965|ref|ZP_18514864.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|425117692|ref|ZP_18519459.1| single-stranded DNA-binding protein [Escherichia coli 8.0566]
gi|425122408|ref|ZP_18524072.1| single-stranded DNA-binding protein [Escherichia coli 8.0569]
gi|425128936|ref|ZP_18530082.1| single-stranded DNA-binding protein [Escherichia coli 8.0586]
gi|425134677|ref|ZP_18535505.1| single-stranded DNA-binding protein [Escherichia coli 8.2524]
gi|425141271|ref|ZP_18541628.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|425146950|ref|ZP_18546919.1| single-stranded DNA-binding protein [Escherichia coli 10.0869]
gi|425153061|ref|ZP_18552651.1| single-stranded DNA-binding protein [Escherichia coli 88.0221]
gi|425158962|ref|ZP_18558201.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|425159420|ref|ZP_18558630.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|425171015|ref|ZP_18569467.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|425177054|ref|ZP_18575151.1| single-stranded DNA-binding protein [Escherichia coli FDA504]
gi|425189417|ref|ZP_18586666.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|425196163|ref|ZP_18592908.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|425202642|ref|ZP_18598825.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|425203009|ref|ZP_18599171.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|425214798|ref|ZP_18610179.1| single-stranded DNA-binding protein [Escherichia coli PA4]
gi|425220880|ref|ZP_18615821.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|425227535|ref|ZP_18621978.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|425233684|ref|ZP_18627701.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|425239607|ref|ZP_18633305.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|425245862|ref|ZP_18639145.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|425251997|ref|ZP_18644919.1| single-stranded DNA-binding protein [Escherichia coli 5905]
gi|425257853|ref|ZP_18650324.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|425264107|ref|ZP_18656074.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|425270118|ref|ZP_18661720.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|425275413|ref|ZP_18666785.1| single-stranded DNA-binding protein [Escherichia coli TW15901]
gi|425280528|ref|ZP_18671736.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
gi|425285967|ref|ZP_18676973.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|425291284|ref|ZP_18682086.1| single-stranded DNA-binding protein [Escherichia coli 3006]
gi|425297582|ref|ZP_18687675.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|425302991|ref|ZP_18692864.1| single-stranded DNA-binding protein [Escherichia coli 07798]
gi|425307898|ref|ZP_18697553.1| single-stranded DNA-binding protein [Escherichia coli N1]
gi|425314269|ref|ZP_18703412.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|425320250|ref|ZP_18709004.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|425326397|ref|ZP_18714697.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|425332704|ref|ZP_18720490.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|425338884|ref|ZP_18726196.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|425345175|ref|ZP_18732039.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|425351013|ref|ZP_18737448.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|425357282|ref|ZP_18743320.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|425363237|ref|ZP_18748860.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|425369501|ref|ZP_18754551.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|425375806|ref|ZP_18760420.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|425382470|ref|ZP_18766436.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|425388692|ref|ZP_18772228.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|425395421|ref|ZP_18778503.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|425401476|ref|ZP_18784158.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|425407573|ref|ZP_18789770.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|425413910|ref|ZP_18795649.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|425420232|ref|ZP_18801481.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|425425106|ref|ZP_18806244.1| single-stranded DNA-binding protein [Escherichia coli 0.1288]
gi|425431526|ref|ZP_18812112.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|427807279|ref|ZP_18974346.1| ssDNA-binding protein [Escherichia coli chi7122]
gi|427811861|ref|ZP_18978926.1| ssDNA-binding protein [Escherichia coli]
gi|428949947|ref|ZP_19022194.1| single-stranded DNA-binding protein [Escherichia coli 88.1467]
gi|428956002|ref|ZP_19027770.1| single-stranded DNA-binding protein [Escherichia coli 88.1042]
gi|428962057|ref|ZP_19033312.1| single-stranded DNA-binding protein [Escherichia coli 89.0511]
gi|428968646|ref|ZP_19039325.1| single-stranded DNA-binding protein [Escherichia coli 90.0091]
gi|428974411|ref|ZP_19044698.1| single-stranded DNA-binding protein [Escherichia coli 90.0039]
gi|428980860|ref|ZP_19050642.1| single-stranded DNA-binding protein [Escherichia coli 90.2281]
gi|428986579|ref|ZP_19055945.1| single-stranded DNA-binding protein [Escherichia coli 93.0055]
gi|428992716|ref|ZP_19061682.1| single-stranded DNA-binding protein [Escherichia coli 93.0056]
gi|428998609|ref|ZP_19067179.1| single-stranded DNA-binding protein [Escherichia coli 94.0618]
gi|429005082|ref|ZP_19073116.1| single-stranded DNA-binding protein [Escherichia coli 95.0183]
gi|429011095|ref|ZP_19078460.1| single-stranded DNA-binding protein [Escherichia coli 95.1288]
gi|429017507|ref|ZP_19084361.1| single-stranded DNA-binding protein [Escherichia coli 95.0943]
gi|429023356|ref|ZP_19089848.1| single-stranded DNA-binding protein [Escherichia coli 96.0428]
gi|429029429|ref|ZP_19095377.1| single-stranded DNA-binding protein [Escherichia coli 96.0427]
gi|429035590|ref|ZP_19101086.1| single-stranded DNA-binding protein [Escherichia coli 96.0939]
gi|429041699|ref|ZP_19106761.1| single-stranded DNA-binding protein [Escherichia coli 96.0932]
gi|429047579|ref|ZP_19112269.1| single-stranded DNA-binding protein [Escherichia coli 96.0107]
gi|429052898|ref|ZP_19117449.1| single-stranded DNA-binding protein [Escherichia coli 97.0003]
gi|429058451|ref|ZP_19122670.1| single-stranded DNA-binding protein [Escherichia coli 97.1742]
gi|429063947|ref|ZP_19127884.1| single-stranded DNA-binding protein [Escherichia coli 97.0007]
gi|429070206|ref|ZP_19133615.1| single-stranded DNA-binding protein [Escherichia coli 99.0672]
gi|429075970|ref|ZP_19139205.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|429081151|ref|ZP_19144271.1| single-stranded DNA-binding protein [Escherichia coli 99.0713]
gi|429721808|ref|ZP_19256719.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429773886|ref|ZP_19305895.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02030]
gi|429779071|ref|ZP_19311032.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429782906|ref|ZP_19314826.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02092]
gi|429788299|ref|ZP_19320181.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02093]
gi|429794737|ref|ZP_19326573.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02281]
gi|429800697|ref|ZP_19332481.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02318]
gi|429804310|ref|ZP_19336062.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02913]
gi|429809135|ref|ZP_19340845.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-03439]
gi|429814899|ref|ZP_19346564.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-04080]
gi|429820103|ref|ZP_19351727.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-03943]
gi|429829340|ref|ZP_19360311.1| single-stranded DNA-binding protein [Escherichia coli 96.0109]
gi|429835813|ref|ZP_19366026.1| single-stranded DNA-binding protein [Escherichia coli 97.0010]
gi|429906177|ref|ZP_19372149.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910311|ref|ZP_19376269.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429916209|ref|ZP_19382152.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921257|ref|ZP_19387181.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927062|ref|ZP_19392971.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930995|ref|ZP_19396892.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429937536|ref|ZP_19403420.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429943214|ref|ZP_19409085.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429945895|ref|ZP_19411753.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429953460|ref|ZP_19419302.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429956803|ref|ZP_19422633.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432351248|ref|ZP_19594565.1| single-stranded DNA-binding protein [Escherichia coli KTE2]
gi|432360549|ref|ZP_19603756.1| single-stranded DNA-binding protein [Escherichia coli KTE4]
gi|432365349|ref|ZP_19608498.1| single-stranded DNA-binding protein [Escherichia coli KTE5]
gi|432367634|ref|ZP_19610743.1| single-stranded DNA-binding protein [Escherichia coli KTE10]
gi|432374644|ref|ZP_19617670.1| single-stranded DNA-binding protein [Escherichia coli KTE11]
gi|432379302|ref|ZP_19622279.1| single-stranded DNA-binding protein [Escherichia coli KTE12]
gi|432383983|ref|ZP_19626903.1| single-stranded DNA-binding protein [Escherichia coli KTE15]
gi|432384998|ref|ZP_19627903.1| single-stranded DNA-binding protein [Escherichia coli KTE16]
gi|432394806|ref|ZP_19637616.1| single-stranded DNA-binding protein [Escherichia coli KTE21]
gi|432395480|ref|ZP_19638276.1| single-stranded DNA-binding protein [Escherichia coli KTE25]
gi|432404456|ref|ZP_19647195.1| single-stranded DNA-binding protein [Escherichia coli KTE26]
gi|432409166|ref|ZP_19651864.1| single-stranded DNA-binding protein [Escherichia coli KTE28]
gi|432409589|ref|ZP_19652279.1| single-stranded DNA-binding protein [Escherichia coli KTE39]
gi|432414551|ref|ZP_19657194.1| single-stranded DNA-binding protein [Escherichia coli KTE44]
gi|432419696|ref|ZP_19662259.1| single-stranded DNA-binding protein [Escherichia coli KTE178]
gi|432428724|ref|ZP_19671199.1| single-stranded DNA-binding protein [Escherichia coli KTE181]
gi|432429836|ref|ZP_19672288.1| single-stranded DNA-binding protein [Escherichia coli KTE187]
gi|432439057|ref|ZP_19681429.1| single-stranded DNA-binding protein [Escherichia coli KTE188]
gi|432443689|ref|ZP_19686010.1| single-stranded DNA-binding protein [Escherichia coli KTE189]
gi|432448764|ref|ZP_19691058.1| single-stranded DNA-binding protein [Escherichia coli KTE191]
gi|432452334|ref|ZP_19694585.1| single-stranded DNA-binding protein [Escherichia coli KTE193]
gi|432454326|ref|ZP_19696543.1| single-stranded DNA-binding protein [Escherichia coli KTE201]
gi|432463467|ref|ZP_19705594.1| single-stranded DNA-binding protein [Escherichia coli KTE204]
gi|432468477|ref|ZP_19710548.1| single-stranded DNA-binding protein [Escherichia coli KTE205]
gi|432473440|ref|ZP_19715473.1| single-stranded DNA-binding protein [Escherichia coli KTE206]
gi|432478422|ref|ZP_19720403.1| single-stranded DNA-binding protein [Escherichia coli KTE208]
gi|432479012|ref|ZP_19720979.1| single-stranded DNA-binding protein [Escherichia coli KTE210]
gi|432487853|ref|ZP_19729755.1| single-stranded DNA-binding protein [Escherichia coli KTE212]
gi|432491891|ref|ZP_19733746.1| single-stranded DNA-binding protein [Escherichia coli KTE213]
gi|432493409|ref|ZP_19735234.1| single-stranded DNA-binding protein [Escherichia coli KTE214]
gi|432502652|ref|ZP_19744397.1| single-stranded DNA-binding protein [Escherichia coli KTE216]
gi|432506988|ref|ZP_19748702.1| single-stranded DNA-binding protein [Escherichia coli KTE220]
gi|432516474|ref|ZP_19753685.1| single-stranded DNA-binding protein [Escherichia coli KTE224]
gi|432520272|ref|ZP_19757447.1| single-stranded DNA-binding protein [Escherichia coli KTE228]
gi|432526572|ref|ZP_19763680.1| single-stranded DNA-binding protein [Escherichia coli KTE230]
gi|432528963|ref|ZP_19766028.1| single-stranded DNA-binding protein [Escherichia coli KTE233]
gi|432531854|ref|ZP_19768870.1| single-stranded DNA-binding protein [Escherichia coli KTE234]
gi|432540440|ref|ZP_19777328.1| single-stranded DNA-binding protein [Escherichia coli KTE235]
gi|432545922|ref|ZP_19782739.1| single-stranded DNA-binding protein [Escherichia coli KTE236]
gi|432551403|ref|ZP_19788146.1| single-stranded DNA-binding protein [Escherichia coli KTE237]
gi|432551663|ref|ZP_19788398.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
gi|432556607|ref|ZP_19793309.1| single-stranded DNA-binding protein [Escherichia coli KTE49]
gi|432561510|ref|ZP_19798148.1| single-stranded DNA-binding protein [Escherichia coli KTE51]
gi|432566509|ref|ZP_19803045.1| single-stranded DNA-binding protein [Escherichia coli KTE53]
gi|432571394|ref|ZP_19807890.1| single-stranded DNA-binding protein [Escherichia coli KTE55]
gi|432578331|ref|ZP_19814773.1| single-stranded DNA-binding protein [Escherichia coli KTE56]
gi|432580868|ref|ZP_19817289.1| single-stranded DNA-binding protein [Escherichia coli KTE57]
gi|432585860|ref|ZP_19822238.1| single-stranded DNA-binding protein [Escherichia coli KTE58]
gi|432590674|ref|ZP_19827011.1| single-stranded DNA-binding protein [Escherichia coli KTE60]
gi|432595377|ref|ZP_19831675.1| single-stranded DNA-binding protein [Escherichia coli KTE62]
gi|432604886|ref|ZP_19841109.1| single-stranded DNA-binding protein [Escherichia coli KTE66]
gi|432605534|ref|ZP_19841739.1| single-stranded DNA-binding protein [Escherichia coli KTE67]
gi|432614154|ref|ZP_19850303.1| single-stranded DNA-binding protein [Escherichia coli KTE72]
gi|432619371|ref|ZP_19855467.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
gi|432624455|ref|ZP_19860463.1| single-stranded DNA-binding protein [Escherichia coli KTE76]
gi|432625230|ref|ZP_19861225.1| single-stranded DNA-binding protein [Escherichia coli KTE77]
gi|432634064|ref|ZP_19869977.1| single-stranded DNA-binding protein [Escherichia coli KTE80]
gi|432634956|ref|ZP_19870850.1| single-stranded DNA-binding protein [Escherichia coli KTE81]
gi|432643656|ref|ZP_19879473.1| single-stranded DNA-binding protein [Escherichia coli KTE83]
gi|432648756|ref|ZP_19884537.1| single-stranded DNA-binding protein [Escherichia coli KTE86]
gi|432653750|ref|ZP_19889485.1| single-stranded DNA-binding protein [Escherichia coli KTE87]
gi|432658324|ref|ZP_19894016.1| single-stranded DNA-binding protein [Escherichia coli KTE93]
gi|432658901|ref|ZP_19894571.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
gi|432663779|ref|ZP_19899386.1| single-stranded DNA-binding protein [Escherichia coli KTE116]
gi|432668492|ref|ZP_19904055.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
gi|432677241|ref|ZP_19912678.1| single-stranded DNA-binding protein [Escherichia coli KTE142]
gi|432682853|ref|ZP_19918201.1| single-stranded DNA-binding protein [Escherichia coli KTE143]
gi|432683535|ref|ZP_19918864.1| single-stranded DNA-binding protein [Escherichia coli KTE156]
gi|432689381|ref|ZP_19924641.1| single-stranded DNA-binding protein [Escherichia coli KTE161]
gi|432696960|ref|ZP_19932147.1| single-stranded DNA-binding protein [Escherichia coli KTE162]
gi|432701600|ref|ZP_19936740.1| single-stranded DNA-binding protein [Escherichia coli KTE169]
gi|432702227|ref|ZP_19937361.1| single-stranded DNA-binding protein [Escherichia coli KTE171]
gi|432708481|ref|ZP_19943553.1| single-stranded DNA-binding protein [Escherichia coli KTE6]
gi|432715945|ref|ZP_19950966.1| single-stranded DNA-binding protein [Escherichia coli KTE8]
gi|432716692|ref|ZP_19951701.1| single-stranded DNA-binding protein [Escherichia coli KTE9]
gi|432721238|ref|ZP_19956171.1| single-stranded DNA-binding protein [Escherichia coli KTE17]
gi|432725636|ref|ZP_19960542.1| single-stranded DNA-binding protein [Escherichia coli KTE18]
gi|432730391|ref|ZP_19965255.1| single-stranded DNA-binding protein [Escherichia coli KTE45]
gi|432735108|ref|ZP_19969916.1| single-stranded DNA-binding protein [Escherichia coli KTE42]
gi|432739418|ref|ZP_19974142.1| single-stranded DNA-binding protein [Escherichia coli KTE23]
gi|432748059|ref|ZP_19982717.1| single-stranded DNA-binding protein [Escherichia coli KTE43]
gi|432752515|ref|ZP_19987089.1| single-stranded DNA-binding protein [Escherichia coli KTE29]
gi|432757050|ref|ZP_19991590.1| single-stranded DNA-binding protein [Escherichia coli KTE22]
gi|432761940|ref|ZP_19996409.1| single-stranded DNA-binding protein [Escherichia coli KTE46]
gi|432762967|ref|ZP_19997425.1| single-stranded DNA-binding protein [Escherichia coli KTE48]
gi|432768432|ref|ZP_20002819.1| single-stranded DNA-binding protein [Escherichia coli KTE50]
gi|432772832|ref|ZP_20007140.1| single-stranded DNA-binding protein [Escherichia coli KTE54]
gi|432776419|ref|ZP_20010680.1| single-stranded DNA-binding protein [Escherichia coli KTE59]
gi|432781419|ref|ZP_20015626.1| single-stranded DNA-binding protein [Escherichia coli KTE63]
gi|432790118|ref|ZP_20024242.1| single-stranded DNA-binding protein [Escherichia coli KTE65]
gi|432790844|ref|ZP_20024962.1| single-stranded DNA-binding protein [Escherichia coli KTE78]
gi|432796834|ref|ZP_20030864.1| single-stranded DNA-binding protein [Escherichia coli KTE79]
gi|432799991|ref|ZP_20033990.1| single-stranded DNA-binding protein [Escherichia coli KTE84]
gi|432808306|ref|ZP_20042216.1| single-stranded DNA-binding protein [Escherichia coli KTE91]
gi|432811810|ref|ZP_20045662.1| single-stranded DNA-binding protein [Escherichia coli KTE101]
gi|432817894|ref|ZP_20051621.1| single-stranded DNA-binding protein [Escherichia coli KTE115]
gi|432818885|ref|ZP_20052603.1| single-stranded DNA-binding protein [Escherichia coli KTE118]
gi|432825014|ref|ZP_20058675.1| single-stranded DNA-binding protein [Escherichia coli KTE123]
gi|432829674|ref|ZP_20063286.1| single-stranded DNA-binding protein [Escherichia coli KTE135]
gi|432832729|ref|ZP_20066279.1| single-stranded DNA-binding protein [Escherichia coli KTE136]
gi|432837156|ref|ZP_20070656.1| single-stranded DNA-binding protein [Escherichia coli KTE140]
gi|432841925|ref|ZP_20075367.1| single-stranded DNA-binding protein [Escherichia coli KTE141]
gi|432856304|ref|ZP_20083744.1| single-stranded DNA-binding protein [Escherichia coli KTE144]
gi|432857519|ref|ZP_20084389.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
gi|432872101|ref|ZP_20091980.1| single-stranded DNA-binding protein [Escherichia coli KTE147]
gi|432878620|ref|ZP_20095902.1| single-stranded DNA-binding protein [Escherichia coli KTE154]
gi|432882907|ref|ZP_20098527.1| single-stranded DNA-binding protein [Escherichia coli KTE158]
gi|432891921|ref|ZP_20104400.1| single-stranded DNA-binding protein [Escherichia coli KTE165]
gi|432896100|ref|ZP_20107377.1| single-stranded DNA-binding protein [Escherichia coli KTE192]
gi|432908027|ref|ZP_20116289.1| single-stranded DNA-binding protein [Escherichia coli KTE194]
gi|432908889|ref|ZP_20116480.1| single-stranded DNA-binding protein [Escherichia coli KTE190]
gi|432916271|ref|ZP_20121243.1| single-stranded DNA-binding protein [Escherichia coli KTE173]
gi|432923598|ref|ZP_20126152.1| single-stranded DNA-binding protein [Escherichia coli KTE175]
gi|432931894|ref|ZP_20131835.1| single-stranded DNA-binding protein [Escherichia coli KTE184]
gi|432941109|ref|ZP_20138803.1| single-stranded DNA-binding protein [Escherichia coli KTE183]
gi|432943926|ref|ZP_20140589.1| single-stranded DNA-binding protein [Escherichia coli KTE196]
gi|432951544|ref|ZP_20145048.1| single-stranded DNA-binding protein [Escherichia coli KTE197]
gi|432958075|ref|ZP_20149217.1| single-stranded DNA-binding protein [Escherichia coli KTE202]
gi|432965828|ref|ZP_20154748.1| single-stranded DNA-binding protein [Escherichia coli KTE203]
gi|432969672|ref|ZP_20158565.1| single-stranded DNA-binding protein [Escherichia coli KTE207]
gi|432976319|ref|ZP_20165148.1| single-stranded DNA-binding protein [Escherichia coli KTE209]
gi|432978964|ref|ZP_20167759.1| single-stranded DNA-binding protein [Escherichia coli KTE211]
gi|432987933|ref|ZP_20176639.1| single-stranded DNA-binding protein [Escherichia coli KTE215]
gi|432988587|ref|ZP_20177263.1| single-stranded DNA-binding protein [Escherichia coli KTE217]
gi|432993300|ref|ZP_20181927.1| single-stranded DNA-binding protein [Escherichia coli KTE218]
gi|432997759|ref|ZP_20186335.1| single-stranded DNA-binding protein [Escherichia coli KTE223]
gi|433003035|ref|ZP_20191539.1| single-stranded DNA-binding protein [Escherichia coli KTE227]
gi|433010294|ref|ZP_20198702.1| single-stranded DNA-binding protein [Escherichia coli KTE229]
gi|433016423|ref|ZP_20204740.1| single-stranded DNA-binding protein [Escherichia coli KTE104]
gi|433021319|ref|ZP_20209387.1| single-stranded DNA-binding protein [Escherichia coli KTE105]
gi|433026005|ref|ZP_20213964.1| single-stranded DNA-binding protein [Escherichia coli KTE106]
gi|433031036|ref|ZP_20218872.1| single-stranded DNA-binding protein [Escherichia coli KTE109]
gi|433036000|ref|ZP_20223679.1| single-stranded DNA-binding protein [Escherichia coli KTE112]
gi|433041105|ref|ZP_20228685.1| single-stranded DNA-binding protein [Escherichia coli KTE113]
gi|433045602|ref|ZP_20233068.1| single-stranded DNA-binding protein [Escherichia coli KTE117]
gi|433050532|ref|ZP_20237842.1| single-stranded DNA-binding protein [Escherichia coli KTE120]
gi|433055691|ref|ZP_20242835.1| single-stranded DNA-binding protein [Escherichia coli KTE122]
gi|433060626|ref|ZP_20247649.1| single-stranded DNA-binding protein [Escherichia coli KTE124]
gi|433065531|ref|ZP_20252425.1| single-stranded DNA-binding protein [Escherichia coli KTE125]
gi|433070470|ref|ZP_20257223.1| single-stranded DNA-binding protein [Escherichia coli KTE128]
gi|433075426|ref|ZP_20262052.1| single-stranded DNA-binding protein [Escherichia coli KTE129]
gi|433080303|ref|ZP_20266812.1| single-stranded DNA-binding protein [Escherichia coli KTE131]
gi|433085018|ref|ZP_20271455.1| single-stranded DNA-binding protein [Escherichia coli KTE133]
gi|433089829|ref|ZP_20276179.1| single-stranded DNA-binding protein [Escherichia coli KTE137]
gi|433094461|ref|ZP_20280703.1| single-stranded DNA-binding protein [Escherichia coli KTE138]
gi|433098929|ref|ZP_20285087.1| single-stranded DNA-binding protein [Escherichia coli KTE139]
gi|433103691|ref|ZP_20289751.1| single-stranded DNA-binding protein [Escherichia coli KTE145]
gi|433108360|ref|ZP_20294311.1| single-stranded DNA-binding protein [Escherichia coli KTE148]
gi|433113373|ref|ZP_20299212.1| single-stranded DNA-binding protein [Escherichia coli KTE150]
gi|433118033|ref|ZP_20303804.1| single-stranded DNA-binding protein [Escherichia coli KTE153]
gi|433122755|ref|ZP_20308402.1| single-stranded DNA-binding protein [Escherichia coli KTE157]
gi|433127735|ref|ZP_20313267.1| single-stranded DNA-binding protein [Escherichia coli KTE160]
gi|433132652|ref|ZP_20318066.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
gi|433137323|ref|ZP_20322640.1| single-stranded DNA-binding protein [Escherichia coli KTE166]
gi|433141808|ref|ZP_20327037.1| single-stranded DNA-binding protein [Escherichia coli KTE167]
gi|433146728|ref|ZP_20331850.1| single-stranded DNA-binding protein [Escherichia coli KTE168]
gi|433151760|ref|ZP_20336748.1| single-stranded DNA-binding protein [Escherichia coli KTE174]
gi|433156329|ref|ZP_20341246.1| single-stranded DNA-binding protein [Escherichia coli KTE176]
gi|433161220|ref|ZP_20346026.1| single-stranded DNA-binding protein [Escherichia coli KTE177]
gi|433166115|ref|ZP_20350833.1| single-stranded DNA-binding protein [Escherichia coli KTE179]
gi|433171113|ref|ZP_20355721.1| single-stranded DNA-binding protein [Escherichia coli KTE180]
gi|433175994|ref|ZP_20360489.1| single-stranded DNA-binding protein [Escherichia coli KTE232]
gi|433180935|ref|ZP_20365299.1| single-stranded DNA-binding protein [Escherichia coli KTE82]
gi|433185883|ref|ZP_20370108.1| single-stranded DNA-binding protein [Escherichia coli KTE85]
gi|433190898|ref|ZP_20374975.1| single-stranded DNA-binding protein [Escherichia coli KTE88]
gi|433196124|ref|ZP_20380081.1| single-stranded DNA-binding protein [Escherichia coli KTE90]
gi|433200859|ref|ZP_20384732.1| single-stranded DNA-binding protein [Escherichia coli KTE94]
gi|433205819|ref|ZP_20389553.1| single-stranded DNA-binding protein [Escherichia coli KTE95]
gi|433210296|ref|ZP_20393950.1| single-stranded DNA-binding protein [Escherichia coli KTE97]
gi|433215135|ref|ZP_20398699.1| single-stranded DNA-binding protein [Escherichia coli KTE99]
gi|433326416|ref|ZP_20403257.1| single-stranded DNA-binding protein [Escherichia coli J96]
gi|442594696|ref|ZP_21012575.1| Single-stranded DNA-binding protein [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|442598773|ref|ZP_21016522.1| Single-stranded DNA-binding protein [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|442605837|ref|ZP_21020651.1| Single-stranded DNA-binding protein [Escherichia coli Nissle 1917]
gi|443615569|ref|YP_007379425.1| single-stranded DNA-binding protein [Escherichia coli APEC O78]
gi|444927843|ref|ZP_21247087.1| single-stranded DNA-binding protein [Escherichia coli 09BKT078844]
gi|444933468|ref|ZP_21252456.1| single-stranded DNA-binding protein [Escherichia coli 99.0814]
gi|444938909|ref|ZP_21257621.1| single-stranded DNA-binding protein [Escherichia coli 99.0815]
gi|444944538|ref|ZP_21263005.1| single-stranded DNA-binding protein [Escherichia coli 99.0816]
gi|444949981|ref|ZP_21268257.1| single-stranded DNA-binding protein [Escherichia coli 99.0839]
gi|444955600|ref|ZP_21273647.1| single-stranded DNA-binding protein [Escherichia coli 99.0848]
gi|444961035|ref|ZP_21278836.1| single-stranded DNA-binding protein [Escherichia coli 99.1753]
gi|444966264|ref|ZP_21283804.1| single-stranded DNA-binding protein [Escherichia coli 99.1775]
gi|444972315|ref|ZP_21289637.1| single-stranded DNA-binding protein [Escherichia coli 99.1793]
gi|444977566|ref|ZP_21294620.1| single-stranded DNA-binding protein [Escherichia coli 99.1805]
gi|444982957|ref|ZP_21299845.1| single-stranded DNA-binding protein [Escherichia coli ATCC 700728]
gi|444988304|ref|ZP_21305065.1| single-stranded DNA-binding protein [Escherichia coli PA11]
gi|444993698|ref|ZP_21310323.1| single-stranded DNA-binding protein [Escherichia coli PA19]
gi|444998881|ref|ZP_21315365.1| single-stranded DNA-binding protein [Escherichia coli PA13]
gi|445004436|ref|ZP_21320809.1| single-stranded DNA-binding protein [Escherichia coli PA2]
gi|445010023|ref|ZP_21326234.1| single-stranded DNA-binding protein [Escherichia coli PA47]
gi|445014956|ref|ZP_21331044.1| single-stranded DNA-binding protein [Escherichia coli PA48]
gi|445020815|ref|ZP_21336762.1| single-stranded DNA-binding protein [Escherichia coli PA8]
gi|445026251|ref|ZP_21342057.1| single-stranded DNA-binding protein [Escherichia coli 7.1982]
gi|445031644|ref|ZP_21347294.1| single-stranded DNA-binding protein [Escherichia coli 99.1781]
gi|445037108|ref|ZP_21352617.1| single-stranded DNA-binding protein [Escherichia coli 99.1762]
gi|445042806|ref|ZP_21358160.1| single-stranded DNA-binding protein [Escherichia coli PA35]
gi|445047941|ref|ZP_21363174.1| single-stranded DNA-binding protein [Escherichia coli 3.4880]
gi|445053528|ref|ZP_21368524.1| single-stranded DNA-binding protein [Escherichia coli 95.0083]
gi|445061505|ref|ZP_21374007.1| single-stranded DNA-binding protein [Escherichia coli 99.0670]
gi|450196401|ref|ZP_21892872.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|450229425|ref|ZP_21897782.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
gi|450254177|ref|ZP_21902530.1| single-stranded DNA-binding protein [Escherichia coli S17]
gi|452968726|ref|ZP_21966953.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4009]
gi|84028790|sp|P0AGE2.2|SSB_ECO57 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|84028791|sp|P0AGE1.2|SSB_ECOL6 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|84028792|sp|P0AGE0.2|SSB_ECOLI RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|84028793|sp|P0AGE3.2|SSB_SHIFL RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|37926356|pdb|1EQQ|A Chain A, Single Stranded Dna Binding Protein And Ssdna Complex
gi|37926357|pdb|1EQQ|B Chain B, Single Stranded Dna Binding Protein And Ssdna Complex
gi|37926358|pdb|1EQQ|C Chain C, Single Stranded Dna Binding Protein And Ssdna Complex
gi|37926359|pdb|1EQQ|D Chain D, Single Stranded Dna Binding Protein And Ssdna Complex
gi|26111292|gb|AAN83475.1|AE016770_275 Single-strand binding protein [Escherichia coli CFT073]
gi|396394|gb|AAC43153.1| single-strand DNA-binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|1790494|gb|AAC77029.1| single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|13364518|dbj|BAB38464.1| ssDNA-binding protein [Escherichia coli O157:H7 str. Sakai]
gi|30042907|gb|AAP18630.1| ssDNA-binding protein [Shigella flexneri 2a str. 2457T]
gi|56384074|gb|AAN45567.2| ssDNA-binding protein [Shigella flexneri 2a str. 301]
gi|73858030|gb|AAZ90737.1| ssDNA-binding protein [Shigella sonnei Ss046]
gi|81247813|gb|ABB68521.1| ssDNA-binding protein [Shigella boydii Sb227]
gi|85676811|dbj|BAE78061.1| Single-stranded DNA-binding protein [Escherichia coli str. K12
substr. W3110]
gi|110345998|gb|ABG72235.1| single-strand binding protein [Escherichia coli 536]
gi|110617472|gb|ABF06139.1| ssDNA-binding protein [Shigella flexneri 5 str. 8401]
gi|157069208|gb|ABV08463.1| single-stranded DNA-binding protein [Escherichia coli HS]
gi|157080974|gb|ABV20682.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|169756870|gb|ACA79569.1| single-strand binding protein [Escherichia coli ATCC 8739]
gi|169891350|gb|ACB05057.1| Single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. DH10B]
gi|170520013|gb|ACB18191.1| single-stranded DNA-binding protein [Escherichia coli SMS-3-5]
gi|187769924|gb|EDU33768.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4196]
gi|188017416|gb|EDU55538.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4113]
gi|188487526|gb|EDU62629.1| single-stranded DNA-binding protein [Escherichia coli 53638]
gi|189001691|gb|EDU70677.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4076]
gi|189357468|gb|EDU75887.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4401]
gi|189364141|gb|EDU82560.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|189368538|gb|EDU86954.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4501]
gi|189374931|gb|EDU93347.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC869]
gi|189379074|gb|EDU97490.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC508]
gi|190901176|gb|EDV60949.1| single-stranded DNA-binding protein [Escherichia coli B7A]
gi|190907738|gb|EDV67332.1| single-stranded DNA-binding protein [Escherichia coli F11]
gi|192931325|gb|EDV83927.1| single-stranded DNA-binding protein [Escherichia coli E22]
gi|192958856|gb|EDV89293.1| single-stranded DNA-binding protein [Escherichia coli E110019]
gi|194415171|gb|EDX31440.1| single-stranded DNA-binding protein [Escherichia coli B171]
gi|194419522|gb|EDX35603.1| single-stranded DNA-binding protein [Shigella dysenteriae 1012]
gi|194423717|gb|EDX39706.1| single-stranded DNA-binding protein [Escherichia coli 101-1]
gi|208726257|gb|EDZ75858.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208735285|gb|EDZ83972.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208738557|gb|EDZ86239.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209158537|gb|ACI35970.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|209751198|gb|ACI73906.1| ssDNA-binding protein [Escherichia coli]
gi|209751200|gb|ACI73907.1| ssDNA-binding protein [Escherichia coli]
gi|209751202|gb|ACI73908.1| ssDNA-binding protein [Escherichia coli]
gi|209751204|gb|ACI73909.1| ssDNA-binding protein [Escherichia coli]
gi|209751206|gb|ACI73910.1| ssDNA-binding protein [Escherichia coli]
gi|209914803|dbj|BAG79877.1| single-strand DNA-binding protein [Escherichia coli SE11]
gi|215267477|emb|CAS11931.1| single-stranded DNA-binding protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217320876|gb|EEC29300.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|218354500|emb|CAV01358.1| Single-stranded DNA-binding protein [Escherichia coli 55989]
gi|218358922|emb|CAQ91583.1| Single-stranded DNA-binding protein [Escherichia fergusonii ATCC
35469]
gi|218363386|emb|CAR01039.1| Single-stranded DNA-binding protein [Escherichia coli IAI1]
gi|218367911|emb|CAR05708.1| Single-stranded DNA-binding protein [Escherichia coli S88]
gi|218372710|emb|CAR20586.1| Single-stranded DNA-binding protein [Escherichia coli IAI39]
gi|218429913|emb|CAR10744.1| Single-stranded DNA-binding protein [Escherichia coli ED1a]
gi|218434778|emb|CAR15711.1| Single-stranded DNA-binding protein [Escherichia coli UMN026]
gi|222035780|emb|CAP78525.1| Single-stranded DNA-binding protein [Escherichia coli LF82]
gi|227836060|gb|EEJ46526.1| single-stranded DNA-binding protein [Escherichia coli 83972]
gi|238863556|gb|ACR65554.1| single-stranded DNA-binding protein [Escherichia coli BW2952]
gi|242379587|emb|CAQ34408.1| ssDNA-binding protein [Escherichia coli BL21(DE3)]
gi|253326356|gb|ACT30958.1| single-strand binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975896|gb|ACT41567.1| single-strand DNA-binding protein [Escherichia coli B str. REL606]
gi|253980052|gb|ACT45722.1| single-strand DNA-binding protein [Escherichia coli BL21(DE3)]
gi|254595479|gb|ACT74840.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|257756819|dbj|BAI28321.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
11368]
gi|257762001|dbj|BAI33498.1| single-stranded DNA-binding protein [Escherichia coli O103:H2 str.
12009]
gi|257767175|dbj|BAI38670.1| single-stranded DNA-binding protein [Escherichia coli O111:H- str.
11128]
gi|260451111|gb|ACX41533.1| single-strand binding protein [Escherichia coli DH1]
gi|281181139|dbj|BAI57469.1| single-strand DNA-binding protein [Escherichia coli SE15]
gi|284924153|emb|CBG37252.1| single-stranded binding protein [Escherichia coli 042]
gi|290765349|gb|ADD59310.1| Single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
CB9615]
gi|291320817|gb|EFE60259.1| single-stranded DNA-binding protein [Escherichia coli B088]
gi|291429613|gb|EFF02627.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|291430282|gb|EFF03280.1| single-stranded DNA-binding protein [Escherichia coli B185]
gi|291472043|gb|EFF14525.1| single-stranded DNA-binding protein [Escherichia coli B354]
gi|294491516|gb|ADE90272.1| single-stranded DNA-binding protein [Escherichia coli IHE3034]
gi|298280561|gb|EFI22062.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|299882356|gb|EFI90567.1| single-strand binding family protein [Escherichia coli MS 196-1]
gi|300301037|gb|EFJ57422.1| single-strand binding family protein [Escherichia coli MS 185-1]
gi|300307827|gb|EFJ62347.1| single-strand binding family protein [Escherichia coli MS 200-1]
gi|300315745|gb|EFJ65529.1| single-strand binding family protein [Escherichia coli MS 175-1]
gi|300356629|gb|EFJ72499.1| single-strand binding family protein [Escherichia coli MS 198-1]
gi|300397961|gb|EFJ81499.1| single-strand binding family protein [Escherichia coli MS 69-1]
gi|300401819|gb|EFJ85357.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|300406718|gb|EFJ90256.1| single-strand binding family protein [Escherichia coli MS 45-1]
gi|300415465|gb|EFJ98775.1| single-strand binding family protein [Escherichia coli MS 115-1]
gi|300419488|gb|EFK02799.1| single-strand binding family protein [Escherichia coli MS 182-1]
gi|300453682|gb|EFK17302.1| single-strand binding family protein [Escherichia coli MS 116-1]
gi|300456791|gb|EFK20284.1| single-strand binding family protein [Escherichia coli MS 21-1]
gi|300462264|gb|EFK25757.1| single-strand binding family protein [Escherichia coli MS 187-1]
gi|300523933|gb|EFK45002.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|300529388|gb|EFK50450.1| single-strand binding family protein [Escherichia coli MS 107-1]
gi|300841960|gb|EFK69720.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|300843484|gb|EFK71244.1| single-strand binding family protein [Escherichia coli MS 78-1]
gi|301076671|gb|EFK91477.1| single-strand binding family protein [Escherichia coli MS 146-1]
gi|305850796|gb|EFM51252.1| single-stranded DNA-binding protein [Escherichia coli NC101]
gi|306907906|gb|EFN38407.1| single-strand binding protein [Escherichia coli W]
gi|307556220|gb|ADN48995.1| single-strand binding protein [Escherichia coli ABU 83972]
gi|307629122|gb|ADN73426.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|308120527|gb|EFO57789.1| single-strand binding family protein [Escherichia coli MS 145-7]
gi|309704526|emb|CBJ03875.1| single-stranded binding protein [Escherichia coli ETEC H10407]
gi|310331679|gb|EFP98935.1| single-stranded DNA-binding protein [Escherichia coli 1827-70]
gi|312289639|gb|EFR17530.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|312948645|gb|ADR29472.1| single-stranded DNA-binding protein [Escherichia coli O83:H1 str.
NRG 857C]
gi|313648742|gb|EFS13182.1| single-stranded DNA-binding protein [Shigella flexneri 2a str.
2457T]
gi|315063383|gb|ADT77710.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|315138614|dbj|BAJ45773.1| single strand DNA-binding protein [Escherichia coli DH1]
gi|315254732|gb|EFU34700.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|315287928|gb|EFU47330.1| single-strand binding family protein [Escherichia coli MS 110-3]
gi|315291571|gb|EFU50931.1| single-strand binding family protein [Escherichia coli MS 153-1]
gi|315297495|gb|EFU56774.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|315617430|gb|EFU98036.1| single-stranded DNA-binding protein [Escherichia coli 3431]
gi|320176443|gb|EFW51495.1| Single-stranded DNA-binding protein [Shigella dysenteriae CDC
74-1112]
gi|320179056|gb|EFW54015.1| Single-stranded DNA-binding protein [Shigella boydii ATCC 9905]
gi|320183077|gb|EFW57940.1| Single-stranded DNA-binding protein [Shigella flexneri CDC 796-83]
gi|320190814|gb|EFW65464.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|320193427|gb|EFW68064.1| Single-stranded DNA-binding protein [Escherichia coli WV_060327]
gi|320200808|gb|EFW75394.1| Single-stranded DNA-binding protein [Escherichia coli EC4100B]
gi|320638816|gb|EFX08462.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
G5101]
gi|320644184|gb|EFX13249.1| single-stranded DNA-binding protein [Escherichia coli O157:H- str.
493-89]
gi|320649503|gb|EFX18027.1| single-stranded DNA-binding protein [Escherichia coli O157:H- str.
H 2687]
gi|320654899|gb|EFX22860.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660747|gb|EFX28204.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665676|gb|EFX32713.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
LSU-61]
gi|323155898|gb|EFZ42066.1| single-stranded DNA-binding protein [Escherichia coli EPECa14]
gi|323164542|gb|EFZ50343.1| single-stranded DNA-binding protein [Shigella sonnei 53G]
gi|323171203|gb|EFZ56851.1| single-stranded DNA-binding protein [Escherichia coli LT-68]
gi|323175948|gb|EFZ61540.1| single-stranded DNA-binding protein [Escherichia coli OK1180]
gi|323182164|gb|EFZ67574.1| single-stranded DNA-binding protein [Escherichia coli OK1357]
gi|323190068|gb|EFZ75346.1| single-stranded DNA-binding protein [Escherichia coli RN587/1]
gi|323380553|gb|ADX52821.1| single-strand binding protein [Escherichia coli KO11FL]
gi|323935549|gb|EGB31880.1| single-strand binding protein [Escherichia coli E1520]
gi|323940243|gb|EGB36436.1| single-strand binding protein [Escherichia coli E482]
gi|323946193|gb|EGB42227.1| single-strand binding protein [Escherichia coli H120]
gi|323950383|gb|EGB46264.1| single-strand binding protein [Escherichia coli H252]
gi|323954465|gb|EGB50249.1| single-strand binding protein [Escherichia coli H263]
gi|323960466|gb|EGB56099.1| single-strand binding protein [Escherichia coli H489]
gi|323965721|gb|EGB61173.1| single-strand binding protein [Escherichia coli M863]
gi|323969805|gb|EGB65086.1| single-strand binding protein [Escherichia coli TA007]
gi|323975306|gb|EGB70409.1| single-strand binding protein [Escherichia coli TW10509]
gi|324007771|gb|EGB76990.1| single-strand binding family protein [Escherichia coli MS 57-2]
gi|324014869|gb|EGB84088.1| single-strand binding family protein [Escherichia coli MS 60-1]
gi|324017097|gb|EGB86316.1| single-strand binding family protein [Escherichia coli MS 117-3]
gi|324112292|gb|EGC06270.1| single-strand binding protein [Escherichia fergusonii B253]
gi|324118632|gb|EGC12524.1| single-strand binding protein [Escherichia coli E1167]
gi|325499649|gb|EGC97508.1| Ssb [Escherichia fergusonii ECD227]
gi|326341894|gb|EGD65677.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|326346532|gb|EGD70266.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|327250404|gb|EGE62117.1| single-stranded DNA-binding protein [Escherichia coli STEC_7v]
gi|330908394|gb|EGH36913.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|331046235|gb|EGI18325.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli M718]
gi|331051678|gb|EGI23717.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA206]
gi|331056780|gb|EGI28774.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA143]
gi|331061837|gb|EGI33762.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA271]
gi|331067199|gb|EGI38607.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA280]
gi|331081211|gb|EGI52372.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H299]
gi|332083553|gb|EGI88773.1| single-stranded DNA-binding protein [Shigella boydii 5216-82]
gi|332084331|gb|EGI89534.1| single-stranded DNA-binding protein [Shigella dysenteriae 155-74]
gi|332087768|gb|EGI92894.1| single-stranded DNA-binding protein [Shigella boydii 3594-74]
gi|332346060|gb|AEE59394.1| single-stranded DNA-binding protein [Escherichia coli UMNK88]
gi|332752004|gb|EGJ82397.1| single-stranded DNA-binding protein [Shigella flexneri 4343-70]
gi|332752174|gb|EGJ82566.1| single-stranded DNA-binding protein [Shigella flexneri K-671]
gi|332753330|gb|EGJ83711.1| single-stranded DNA-binding protein [Shigella flexneri 2747-71]
gi|332764766|gb|EGJ94995.1| ssDNA-binding protein [Shigella flexneri 2930-71]
gi|332999058|gb|EGK18647.1| single-stranded DNA-binding protein [Shigella flexneri K-272]
gi|332999218|gb|EGK18805.1| single-stranded DNA-binding protein [Shigella flexneri K-218]
gi|333014197|gb|EGK33553.1| single-stranded DNA-binding protein [Shigella flexneri K-304]
gi|333014408|gb|EGK33759.1| single-stranded DNA-binding protein [Shigella flexneri K-227]
gi|333972270|gb|AEG39075.1| Single-stranded DNA-binding protein [Escherichia coli NA114]
gi|335572612|gb|EGM58983.1| ssDNA-binding protein [Shigella flexneri J1713]
gi|338767758|gb|EGP22568.1| Single-stranded DNA-binding protein [Escherichia coli PCN033]
gi|339417788|gb|AEJ59460.1| single-stranded DNA-binding protein [Escherichia coli UMNF18]
gi|340732081|gb|EGR61220.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|340737656|gb|EGR71911.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
LB226692]
gi|341920849|gb|EGT70454.1| hypothetical protein C22711_4487 [Escherichia coli O104:H4 str.
C227-11]
gi|342363434|gb|EGU27542.1| single-stranded DNA-binding protein [Escherichia coli XH140A]
gi|342930172|gb|EGU98894.1| single-strand binding protein [Escherichia coli MS 79-10]
gi|345330870|gb|EGW63333.1| single-stranded DNA-binding protein [Escherichia coli 2534-86]
gi|345331963|gb|EGW64421.1| single-stranded DNA-binding protein [Escherichia coli STEC_B2F1]
gi|345342652|gb|EGW75044.1| single-stranded DNA-binding protein [Escherichia coli STEC_C165-02]
gi|345346331|gb|EGW78661.1| single-stranded DNA-binding protein [Escherichia coli STEC_94C]
gi|345347324|gb|EGW79636.1| single-stranded DNA-binding protein [Escherichia coli 3030-1]
gi|345352495|gb|EGW84743.1| single-stranded DNA-binding protein [Escherichia coli STEC_DG131-3]
gi|345368422|gb|EGX00420.1| single-stranded DNA-binding protein [Escherichia coli G58-1]
gi|345384304|gb|EGX14171.1| single-stranded DNA-binding protein [Escherichia coli STEC_S1191]
gi|345389613|gb|EGX19418.1| single-stranded DNA-binding protein [Escherichia coli TX1999]
gi|349740738|gb|AEQ15444.1| single-stranded DNA-binding protein [Escherichia coli O7:K1 str.
CE10]
gi|354856301|gb|EHF16761.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
C236-11]
gi|354860867|gb|EHF21308.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
04-8351]
gi|354861392|gb|EHF21832.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
C227-11]
gi|354870097|gb|EHF30503.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
09-7901]
gi|354874496|gb|EHF34864.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-3677]
gi|354883738|gb|EHF44053.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4404]
gi|354888000|gb|EHF48263.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4522]
gi|354891684|gb|EHF51910.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4623]
gi|354903385|gb|EHF63487.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354907031|gb|EHF67098.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354908972|gb|EHF69009.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354911098|gb|EHF71104.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354919651|gb|EHF79593.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C5]
gi|355349233|gb|EHF98442.1| single strand DNA-binding protein [Escherichia coli cloneA_i1]
gi|355422950|gb|AER87147.1| single-stranded DNA-binding protein [Escherichia coli str. 'clone D
i2']
gi|355427870|gb|AER92066.1| single-stranded DNA-binding protein [Escherichia coli str. 'clone D
i14']
gi|359334169|dbj|BAL40616.1| single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. MDS42]
gi|371596940|gb|EHN85766.1| single-stranded DNA-binding protein [Escherichia coli H494]
gi|371597795|gb|EHN86614.1| single-stranded DNA-binding protein [Escherichia coli TA124]
gi|371606174|gb|EHN94772.1| single-stranded DNA-binding protein [Escherichia coli H397]
gi|371610291|gb|EHN98820.1| single-stranded DNA-binding protein [Escherichia coli B093]
gi|371614816|gb|EHO03299.1| single-stranded DNA-binding protein [Escherichia coli E101]
gi|373247523|gb|EHP66964.1| single-stranded DNA-binding protein [Escherichia coli 4_1_47FAA]
gi|374361508|gb|AEZ43215.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
RM12579]
gi|375321668|gb|EHS67483.1| single-stranded DNA-binding protein [Escherichia coli O157:H43 str.
T22]
gi|377838078|gb|EHU03204.1| ssDNA-binding protein [Escherichia coli DEC1A]
gi|377838158|gb|EHU03282.1| ssDNA-binding protein [Escherichia coli DEC1C]
gi|377840362|gb|EHU05435.1| ssDNA-binding protein [Escherichia coli DEC1B]
gi|377854797|gb|EHU19673.1| ssDNA-binding protein [Escherichia coli DEC1E]
gi|377856056|gb|EHU20917.1| single-stranded DNA-binding protein [Escherichia coli DEC2A]
gi|377864762|gb|EHU29554.1| single-stranded DNA-binding protein [Escherichia coli DEC1D]
gi|377869619|gb|EHU34330.1| ssDNA-binding protein [Escherichia coli DEC2B]
gi|377871028|gb|EHU35696.1| ssDNA-binding protein [Escherichia coli DEC2C]
gi|377872805|gb|EHU37447.1| ssDNA-binding protein [Escherichia coli DEC2D]
gi|377885025|gb|EHU49531.1| ssDNA-binding protein [Escherichia coli DEC2E]
gi|377887870|gb|EHU52344.1| ssDNA-binding protein [Escherichia coli DEC3A]
gi|377888315|gb|EHU52786.1| ssDNA-binding protein [Escherichia coli DEC3B]
gi|377901059|gb|EHU65382.1| ssDNA-binding protein [Escherichia coli DEC3C]
gi|377904991|gb|EHU69268.1| ssDNA-binding protein [Escherichia coli DEC3D]
gi|377905853|gb|EHU70112.1| ssDNA-binding protein [Escherichia coli DEC3E]
gi|377916380|gb|EHU80467.1| ssDNA-binding protein [Escherichia coli DEC3F]
gi|377922430|gb|EHU86416.1| ssDNA-binding protein [Escherichia coli DEC4A]
gi|377925325|gb|EHU89265.1| ssDNA-binding protein [Escherichia coli DEC4B]
gi|377935745|gb|EHU99539.1| ssDNA-binding protein [Escherichia coli DEC4D]
gi|377936635|gb|EHV00429.1| ssDNA-binding protein [Escherichia coli DEC4C]
gi|377942964|gb|EHV06687.1| ssDNA-binding protein [Escherichia coli DEC4E]
gi|377952751|gb|EHV16332.1| ssDNA-binding protein [Escherichia coli DEC4F]
gi|377956045|gb|EHV19596.1| ssDNA-binding protein [Escherichia coli DEC5A]
gi|377960680|gb|EHV24159.1| ssDNA-binding protein [Escherichia coli DEC5B]
gi|377968112|gb|EHV31506.1| ssDNA-binding protein [Escherichia coli DEC5C]
gi|377969407|gb|EHV32784.1| ssDNA-binding protein [Escherichia coli DEC5D]
gi|377978293|gb|EHV41572.1| single-stranded DNA-binding protein [Escherichia coli DEC5E]
gi|377987595|gb|EHV50780.1| ssDNA-binding protein [Escherichia coli DEC6B]
gi|377988044|gb|EHV51225.1| single-stranded DNA-binding protein [Escherichia coli DEC6A]
gi|377990829|gb|EHV53986.1| single-stranded DNA-binding protein [Escherichia coli DEC6C]
gi|378003058|gb|EHV66104.1| single-stranded DNA-binding protein [Escherichia coli DEC6D]
gi|378005334|gb|EHV68338.1| ssDNA-binding protein [Escherichia coli DEC6E]
gi|378008955|gb|EHV71913.1| single-stranded DNA-binding protein [Escherichia coli DEC7A]
gi|378020395|gb|EHV83141.1| ssDNA-binding protein [Escherichia coli DEC7C]
gi|378022960|gb|EHV85641.1| ssDNA-binding protein [Escherichia coli DEC7D]
gi|378027330|gb|EHV89960.1| ssDNA-binding protein [Escherichia coli DEC7B]
gi|378033688|gb|EHV96263.1| single-stranded DNA-binding protein [Escherichia coli DEC7E]
gi|378041628|gb|EHW04087.1| single-stranded DNA-binding protein [Escherichia coli DEC8A]
gi|378042076|gb|EHW04528.1| ssDNA-binding protein [Escherichia coli DEC8B]
gi|378046730|gb|EHW09104.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|378056778|gb|EHW19017.1| ssDNA-binding protein [Escherichia coli DEC8D]
gi|378059401|gb|EHW21601.1| ssDNA-binding protein [Escherichia coli DEC8E]
gi|378067008|gb|EHW29135.1| ssDNA-binding protein [Escherichia coli DEC9A]
gi|378071902|gb|EHW33966.1| ssDNA-binding protein [Escherichia coli DEC9B]
gi|378078109|gb|EHW40100.1| ssDNA-binding protein [Escherichia coli DEC9C]
gi|378085468|gb|EHW47355.1| ssDNA-binding protein [Escherichia coli DEC9D]
gi|378088369|gb|EHW50223.1| ssDNA-binding protein [Escherichia coli DEC9E]
gi|378095441|gb|EHW57227.1| ssDNA-binding protein [Escherichia coli DEC10A]
gi|378100738|gb|EHW62430.1| ssDNA-binding protein [Escherichia coli DEC10B]
gi|378106121|gb|EHW67757.1| ssDNA-binding protein [Escherichia coli DEC10C]
gi|378111970|gb|EHW73551.1| ssDNA-binding protein [Escherichia coli DEC10D]
gi|378122389|gb|EHW83817.1| ssDNA-binding protein [Escherichia coli DEC10E]
gi|378123067|gb|EHW84485.1| ssDNA-binding protein [Escherichia coli DEC11A]
gi|378123888|gb|EHW85304.1| ssDNA-binding protein [Escherichia coli DEC10F]
gi|378137440|gb|EHW98716.1| ssDNA-binding protein [Escherichia coli DEC11B]
gi|378143099|gb|EHX04292.1| single-stranded DNA-binding protein [Escherichia coli DEC11D]
gi|378145040|gb|EHX06207.1| single-stranded DNA-binding protein [Escherichia coli DEC11C]
gi|378153805|gb|EHX14884.1| single-stranded DNA-binding protein [Escherichia coli DEC11E]
gi|378159983|gb|EHX20981.1| ssDNA-binding protein [Escherichia coli DEC12B]
gi|378163286|gb|EHX24239.1| single-stranded DNA-binding protein [Escherichia coli DEC12A]
gi|378164183|gb|EHX25130.1| single-stranded DNA-binding protein [Escherichia coli DEC12C]
gi|378178265|gb|EHX39034.1| ssDNA-binding protein [Escherichia coli DEC12D]
gi|378181464|gb|EHX42135.1| ssDNA-binding protein [Escherichia coli DEC12E]
gi|378181524|gb|EHX42194.1| ssDNA-binding protein [Escherichia coli DEC13A]
gi|378194760|gb|EHX55270.1| ssDNA-binding protein [Escherichia coli DEC13C]
gi|378194919|gb|EHX55427.1| ssDNA-binding protein [Escherichia coli DEC13B]
gi|378196924|gb|EHX57408.1| ssDNA-binding protein [Escherichia coli DEC13D]
gi|378207624|gb|EHX68014.1| ssDNA-binding protein [Escherichia coli DEC13E]
gi|378211673|gb|EHX72009.1| single-stranded DNA-binding protein [Escherichia coli DEC14A]
gi|378213183|gb|EHX73501.1| ssDNA-binding protein [Escherichia coli DEC14B]
gi|378222960|gb|EHX83191.1| ssDNA-binding protein [Escherichia coli DEC14C]
gi|378232295|gb|EHX92396.1| ssDNA-binding protein [Escherichia coli DEC15A]
gi|378238679|gb|EHX98673.1| ssDNA-binding protein [Escherichia coli DEC15B]
gi|378241527|gb|EHY01493.1| ssDNA-binding protein [Escherichia coli DEC15C]
gi|378249397|gb|EHY09306.1| ssDNA-binding protein [Escherichia coli DEC15D]
gi|378254600|gb|EHY14463.1| ssDNA-binding protein [Escherichia coli DEC15E]
gi|380345950|gb|EIA34256.1| single-stranded DNA-binding protein [Escherichia coli SCI-07]
gi|383105468|gb|AFG42977.1| Single-stranded DNA-binding protein [Escherichia coli P12b]
gi|383390445|gb|AFH15403.1| single-stranded DNA-binding protein [Escherichia coli KO11FL]
gi|383407700|gb|AFH13943.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|383469347|gb|EID64368.1| single-stranded DNA-binding protein [Shigella flexneri 5a str.
M90T]
gi|383477025|gb|EID68952.1| single-stranded DNA-binding protein [Escherichia coli W26]
gi|384377168|gb|EIE35064.1| single-stranded DNA-binding protein [Escherichia coli J53]
gi|384471313|gb|EIE55395.1| single-stranded DNA-binding protein [Escherichia coli AI27]
gi|385154494|gb|EIF16506.1| single-stranded DNA-binding protein [Escherichia coli O32:H37 str.
P4]
gi|385541046|gb|EIF87858.1| single-stranded DNA-binding protein [Escherichia coli M919]
gi|385708049|gb|EIG45069.1| single-stranded DNA-binding protein [Escherichia coli H730]
gi|385708324|gb|EIG45337.1| single-stranded DNA-binding protein [Escherichia coli B799]
gi|386124182|gb|EIG72765.1| single-stranded DNA-binding protein [Escherichia sp. 4_1_40B]
gi|386139022|gb|EIG80177.1| single-stranded DNA-binding protein [Escherichia coli 1.2741]
gi|386144245|gb|EIG90712.1| single-stranded DNA-binding protein [Escherichia coli 97.0246]
gi|386150092|gb|EIH01381.1| single-stranded DNA-binding protein [Escherichia coli 5.0588]
gi|386155599|gb|EIH11950.1| single-stranded DNA-binding protein [Escherichia coli 97.0259]
gi|386161156|gb|EIH22959.1| single-stranded DNA-binding protein [Escherichia coli 1.2264]
gi|386166734|gb|EIH33254.1| single-stranded DNA-binding protein [Escherichia coli 96.0497]
gi|386171504|gb|EIH43548.1| single-stranded DNA-binding protein [Escherichia coli 99.0741]
gi|386177201|gb|EIH54680.1| single-stranded DNA-binding protein [Escherichia coli 3.2608]
gi|386181715|gb|EIH64476.1| single-stranded DNA-binding protein [Escherichia coli 93.0624]
gi|386187464|gb|EIH76283.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|386197684|gb|EIH91883.1| single-stranded DNA-binding protein [Escherichia coli JB1-95]
gi|386199208|gb|EIH98199.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
gi|386205854|gb|EII10361.1| single-stranded DNA-binding protein [Escherichia coli 5.0959]
gi|386213318|gb|EII23747.1| single-stranded DNA-binding protein [Escherichia coli 9.0111]
gi|386219572|gb|EII36036.1| single-stranded DNA-binding protein [Escherichia coli 4.0967]
gi|386225482|gb|EII47812.1| single-stranded DNA-binding protein [Escherichia coli 2.3916]
gi|386227410|gb|EII54766.1| single-stranded DNA-binding protein [Escherichia coli 3.3884]
gi|386234032|gb|EII66012.1| single-stranded DNA-binding protein [Escherichia coli 2.4168]
gi|386237441|gb|EII74386.1| single-stranded DNA-binding protein [Escherichia coli 3.2303]
gi|386246683|gb|EII88413.1| single-stranded DNA-binding protein [Escherichia coli 3003]
gi|386248690|gb|EII94862.1| single-stranded DNA-binding protein [Escherichia coli TW07793]
gi|386251652|gb|EIJ01344.1| single-stranded DNA-binding protein [Escherichia coli B41]
gi|386259173|gb|EIJ14647.1| single-stranded DNA-binding protein [Escherichia coli 900105 (10e)]
gi|386798742|gb|AFJ31776.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|388333046|gb|EIK99689.1| single-stranded DNA-binding protein [Escherichia coli O103:H2 str.
CVM9450]
gi|388343557|gb|EIL09489.1| single-stranded DNA-binding protein [Escherichia coli O103:H25 str.
CVM9340]
gi|388351101|gb|EIL16379.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9534]
gi|388352881|gb|EIL17964.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9545]
gi|388357928|gb|EIL22426.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|388365771|gb|EIL29547.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9574]
gi|388372667|gb|EIL36084.1| single-strand binding protein [Escherichia coli O26:H11 str.
CVM10026]
gi|388373894|gb|EIL37118.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9942]
gi|388384788|gb|EIL46496.1| single-stranded DNA-binding protein [Escherichia coli 541-15]
gi|388387672|gb|EIL49282.1| single-stranded DNA-binding protein [Escherichia coli KD2]
gi|388390071|gb|EIL51571.1| single-stranded DNA-binding protein [Escherichia coli KD1]
gi|388402526|gb|EIL63098.1| single-stranded DNA-binding protein [Escherichia coli 541-1]
gi|388403637|gb|EIL64141.1| single-stranded DNA-binding protein [Escherichia coli 576-1]
gi|388410798|gb|EIL71001.1| single-stranded DNA-binding protein [Escherichia coli 75]
gi|388415649|gb|EIL75571.1| single-stranded DNA-binding protein [Escherichia coli CUMT8]
gi|388421786|gb|EIL81387.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|390636385|gb|EIN15969.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|390636814|gb|EIN16384.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|390637617|gb|EIN17159.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|390655434|gb|EIN33378.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|390656210|gb|EIN34096.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|390658160|gb|EIN35961.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|390673286|gb|EIN49530.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|390679994|gb|EIN55850.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|390691146|gb|EIN65910.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|390695576|gb|EIN70100.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|390696879|gb|EIN71320.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|390710809|gb|EIN83811.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|390716227|gb|EIN89042.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|390717449|gb|EIN90234.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|390723490|gb|EIN96085.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|390736044|gb|EIO07399.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|390736675|gb|EIO08002.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|390740460|gb|EIO11589.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|390755000|gb|EIO24550.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|390756563|gb|EIO26070.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|390761186|gb|EIO30488.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|390764219|gb|EIO33433.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|390778143|gb|EIO45901.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|390784529|gb|EIO52096.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|390792334|gb|EIO59688.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|390796048|gb|EIO63324.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|390799238|gb|EIO66413.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|390803904|gb|EIO70891.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|390820433|gb|EIO86739.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|390820858|gb|EIO87113.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|390821867|gb|EIO88033.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|390826970|gb|EIO92768.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|390839935|gb|EIP04013.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|390842147|gb|EIP06019.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|390847185|gb|EIP10734.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|390857623|gb|EIP20050.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|390862042|gb|EIP24255.1| single-stranded DNA-binding protein [Escherichia coli EC4013]
gi|390865782|gb|EIP27777.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|390874475|gb|EIP35597.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|390879716|gb|EIP40460.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|390889575|gb|EIP49300.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|390890741|gb|EIP50398.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|390897531|gb|EIP56851.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|390905275|gb|EIP64226.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|390914076|gb|EIP72623.1| single-stranded DNA-binding protein [Escherichia coli EC1845]
gi|390914797|gb|EIP73328.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|391245829|gb|EIQ05095.1| single-stranded DNA-binding protein [Shigella flexneri 2850-71]
gi|391247537|gb|EIQ06785.1| single-stranded DNA-binding protein [Shigella flexneri CCH060]
gi|391258876|gb|EIQ17960.1| single-stranded DNA-binding protein [Shigella flexneri K-315]
gi|391262922|gb|EIQ21933.1| single-stranded DNA-binding protein [Shigella boydii 965-58]
gi|391263450|gb|EIQ22456.1| single-stranded DNA-binding protein [Shigella flexneri K-404]
gi|391271131|gb|EIQ30007.1| single-stranded DNA-binding protein [Shigella boydii 4444-74]
gi|391276765|gb|EIQ35527.1| single-stranded DNA-binding protein [Shigella sonnei 3226-85]
gi|391279930|gb|EIQ38610.1| single-stranded DNA-binding protein [Shigella sonnei 3233-85]
gi|391291288|gb|EIQ49698.1| ssDNA-binding protein [Shigella sonnei 4822-66]
gi|391293492|gb|EIQ51764.1| single-stranded DNA-binding protein [Shigella flexneri 1235-66]
gi|391296649|gb|EIQ54733.1| single-stranded DNA-binding protein [Shigella dysenteriae 225-75]
gi|391300732|gb|EIQ58640.1| single-stranded DNA-binding protein [Escherichia coli EPECa12]
gi|391308722|gb|EIQ66412.1| ssDNA-binding protein [Escherichia coli EPEC C342-62]
gi|394388831|gb|EJE66069.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9602]
gi|394392224|gb|EJE69013.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM10224]
gi|394394663|gb|EJE71223.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
gi|394412079|gb|EJE86257.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|394414584|gb|EJE88525.1| hypothetical protein ECO10021_28380 [Escherichia coli O26:H11 str.
CVM10021]
gi|394422414|gb|EJE95775.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM10030]
gi|394422836|gb|EJE96149.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9455]
gi|394433693|gb|EJF05700.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|397782143|gb|EJK93011.1| single-stranded DNA-binding protein [Escherichia coli STEC_O31]
gi|397894270|gb|EJL10717.1| ssDNA-binding protein [Shigella sonnei str. Moseley]
gi|397895083|gb|EJL11517.1| ssDNA-binding protein [Shigella flexneri 6603-63]
gi|404293224|gb|EEH72166.2| single-stranded DNA-binding protein [Escherichia sp. 1_1_43]
gi|404336125|gb|EJZ62588.1| ssDNA-binding protein [Shigella flexneri 1485-80]
gi|406779918|gb|AFS59342.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056507|gb|AFS76558.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2011C-3493]
gi|407063103|gb|AFS84150.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408061724|gb|EKG96232.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|408062730|gb|EKG97231.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|408073053|gb|EKH07362.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|408079613|gb|EKH13728.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|408087894|gb|EKH21296.1| single-stranded DNA-binding protein [Escherichia coli FDA504]
gi|408092660|gb|EKH25845.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|408100376|gb|EKH32882.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|408105182|gb|EKH37382.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|408112004|gb|EKH43694.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|408124510|gb|EKH55174.1| single-stranded DNA-binding protein [Escherichia coli PA4]
gi|408133504|gb|EKH63401.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|408134433|gb|EKH64264.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|408135922|gb|EKH65681.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|408143300|gb|EKH72608.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|408151628|gb|EKH80115.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|408156717|gb|EKH84917.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|408160880|gb|EKH88871.1| single-stranded DNA-binding protein [Escherichia coli 5905]
gi|408169768|gb|EKH97013.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|408176521|gb|EKI03369.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|408179569|gb|EKI06227.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|408189225|gb|EKI14975.1| single-stranded DNA-binding protein [Escherichia coli TW15901]
gi|408196616|gb|EKI21895.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
gi|408196922|gb|EKI22196.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|408208419|gb|EKI33068.1| single-stranded DNA-binding protein [Escherichia coli 3006]
gi|408209211|gb|EKI33813.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|408209774|gb|EKI34358.1| single-stranded DNA-binding protein [Escherichia coli 07798]
gi|408223135|gb|EKI46930.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|408224142|gb|EKI47868.1| single-stranded DNA-binding protein [Escherichia coli N1]
gi|408234321|gb|EKI57346.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|408236817|gb|EKI59698.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|408242493|gb|EKI65076.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|408251234|gb|EKI72983.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|408255572|gb|EKI77007.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|408262148|gb|EKI83098.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|408270649|gb|EKI90830.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|408273483|gb|EKI93537.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|408281740|gb|EKJ01128.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|408287638|gb|EKJ06495.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|408292581|gb|EKJ11092.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|408302586|gb|EKJ20090.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|408303707|gb|EKJ21156.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|408315143|gb|EKJ31472.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|408320779|gb|EKJ36850.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|408322258|gb|EKJ38252.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|408333587|gb|EKJ48536.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|408340134|gb|EKJ54643.1| single-stranded DNA-binding protein [Escherichia coli 0.1288]
gi|408341123|gb|EKJ55594.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|408457703|gb|EKJ81496.1| single-stranded DNA-binding protein [Escherichia coli AD30]
gi|408543933|gb|EKK21406.1| single-stranded DNA-binding protein [Escherichia coli 5.2239]
gi|408544487|gb|EKK21940.1| single-stranded DNA-binding protein [Escherichia coli 3.4870]
gi|408544946|gb|EKK22387.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|408562429|gb|EKK38591.1| single-stranded DNA-binding protein [Escherichia coli 8.0566]
gi|408562462|gb|EKK38623.1| single-stranded DNA-binding protein [Escherichia coli 8.0586]
gi|408563527|gb|EKK39659.1| single-stranded DNA-binding protein [Escherichia coli 8.0569]
gi|408575237|gb|EKK50921.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|408577487|gb|EKK53060.1| single-stranded DNA-binding protein [Escherichia coli 8.2524]
gi|408587873|gb|EKK62497.1| single-stranded DNA-binding protein [Escherichia coli 10.0869]
gi|408592786|gb|EKK67142.1| single-stranded DNA-binding protein [Escherichia coli 88.0221]
gi|408598131|gb|EKK72091.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|408607251|gb|EKK80655.1| single-stranded DNA-binding protein [Escherichia coli 10.0821]
gi|412965461|emb|CCK49394.1| ssDNA-binding protein [Escherichia coli chi7122]
gi|412972040|emb|CCJ46710.1| ssDNA-binding protein [Escherichia coli]
gi|421936666|gb|EKT94327.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421939594|gb|EKT97109.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421948834|gb|EKU05834.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427200600|gb|EKV71013.1| single-stranded DNA-binding protein [Escherichia coli 89.0511]
gi|427200774|gb|EKV71186.1| single-stranded DNA-binding protein [Escherichia coli 88.1042]
gi|427203754|gb|EKV74052.1| single-stranded DNA-binding protein [Escherichia coli 88.1467]
gi|427216882|gb|EKV85971.1| single-stranded DNA-binding protein [Escherichia coli 90.0091]
gi|427220973|gb|EKV89860.1| single-stranded DNA-binding protein [Escherichia coli 90.2281]
gi|427223502|gb|EKV92246.1| single-stranded DNA-binding protein [Escherichia coli 90.0039]
gi|427237133|gb|EKW04677.1| single-stranded DNA-binding protein [Escherichia coli 93.0056]
gi|427237317|gb|EKW04860.1| single-stranded DNA-binding protein [Escherichia coli 93.0055]
gi|427241682|gb|EKW09106.1| single-stranded DNA-binding protein [Escherichia coli 94.0618]
gi|427254988|gb|EKW21264.1| single-stranded DNA-binding protein [Escherichia coli 95.0183]
gi|427256700|gb|EKW22855.1| single-stranded DNA-binding protein [Escherichia coli 95.1288]
gi|427256865|gb|EKW23013.1| single-stranded DNA-binding protein [Escherichia coli 95.0943]
gi|427272654|gb|EKW37379.1| single-stranded DNA-binding protein [Escherichia coli 96.0428]
gi|427273880|gb|EKW38546.1| single-stranded DNA-binding protein [Escherichia coli 96.0427]
gi|427279895|gb|EKW44295.1| single-stranded DNA-binding protein [Escherichia coli 96.0939]
gi|427288433|gb|EKW52067.1| single-stranded DNA-binding protein [Escherichia coli 96.0932]
gi|427295504|gb|EKW58612.1| single-stranded DNA-binding protein [Escherichia coli 96.0107]
gi|427296722|gb|EKW59770.1| single-stranded DNA-binding protein [Escherichia coli 97.0003]
gi|427306891|gb|EKW69388.1| single-stranded DNA-binding protein [Escherichia coli 97.1742]
gi|427309766|gb|EKW72059.1| single-stranded DNA-binding protein [Escherichia coli 97.0007]
gi|427314688|gb|EKW76727.1| single-stranded DNA-binding protein [Escherichia coli 99.0672]
gi|427324257|gb|EKW85736.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|427325471|gb|EKW86911.1| single-stranded DNA-binding protein [Escherichia coli 99.0713]
gi|429250243|gb|EKY34908.1| single-stranded DNA-binding protein [Escherichia coli 96.0109]
gi|429250678|gb|EKY35329.1| single-stranded DNA-binding protein [Escherichia coli 97.0010]
gi|429354141|gb|EKY90845.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02030]
gi|429354994|gb|EKY91688.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429355986|gb|EKY92669.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02092]
gi|429369711|gb|EKZ06286.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02093]
gi|429370006|gb|EKZ06573.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02281]
gi|429371751|gb|EKZ08302.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02318]
gi|429385878|gb|EKZ22330.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02913]
gi|429387827|gb|EKZ24258.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-03439]
gi|429388007|gb|EKZ24434.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-03943]
gi|429398955|gb|EKZ35280.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-04080]
gi|429401070|gb|EKZ37379.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429403632|gb|EKZ39914.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429412025|gb|EKZ48223.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429414158|gb|EKZ50334.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429422277|gb|EKZ58397.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429425154|gb|EKZ61245.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429430873|gb|EKZ66924.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429437750|gb|EKZ73748.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429441605|gb|EKZ77574.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429446947|gb|EKZ82872.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429453186|gb|EKZ89055.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429458240|gb|EKZ94069.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430872257|gb|ELB95871.1| single-stranded DNA-binding protein [Escherichia coli KTE4]
gi|430881983|gb|ELC05188.1| single-stranded DNA-binding protein [Escherichia coli KTE2]
gi|430882614|gb|ELC05693.1| single-stranded DNA-binding protein [Escherichia coli KTE5]
gi|430890156|gb|ELC12793.1| single-stranded DNA-binding protein [Escherichia coli KTE10]
gi|430893039|gb|ELC15387.1| single-stranded DNA-binding protein [Escherichia coli KTE11]
gi|430894950|gb|ELC17226.1| single-stranded DNA-binding protein [Escherichia coli KTE12]
gi|430902626|gb|ELC24483.1| single-stranded DNA-binding protein [Escherichia coli KTE15]
gi|430911597|gb|ELC32878.1| single-stranded DNA-binding protein [Escherichia coli KTE16]
gi|430912556|gb|ELC33729.1| single-stranded DNA-binding protein [Escherichia coli KTE21]
gi|430919764|gb|ELC40685.1| single-stranded DNA-binding protein [Escherichia coli KTE25]
gi|430922121|gb|ELC42885.1| single-stranded DNA-binding protein [Escherichia coli KTE26]
gi|430925642|gb|ELC46308.1| single-stranded DNA-binding protein [Escherichia coli KTE28]
gi|430939954|gb|ELC60160.1| single-stranded DNA-binding protein [Escherichia coli KTE39]
gi|430946304|gb|ELC66247.1| single-stranded DNA-binding protein [Escherichia coli KTE44]
gi|430949003|gb|ELC68584.1| single-stranded DNA-binding protein [Escherichia coli KTE178]
gi|430949767|gb|ELC69193.1| single-stranded DNA-binding protein [Escherichia coli KTE181]
gi|430958108|gb|ELC76706.1| single-stranded DNA-binding protein [Escherichia coli KTE187]
gi|430959255|gb|ELC77589.1| single-stranded DNA-binding protein [Escherichia coli KTE188]
gi|430960287|gb|ELC78443.1| single-stranded DNA-binding protein [Escherichia coli KTE189]
gi|430970449|gb|ELC87521.1| single-stranded DNA-binding protein [Escherichia coli KTE191]
gi|430976492|gb|ELC93358.1| single-stranded DNA-binding protein [Escherichia coli KTE193]
gi|430984625|gb|ELD01247.1| single-stranded DNA-binding protein [Escherichia coli KTE204]
gi|430987437|gb|ELD03976.1| single-stranded DNA-binding protein [Escherichia coli KTE201]
gi|430989373|gb|ELD05829.1| single-stranded DNA-binding protein [Escherichia coli KTE205]
gi|430994925|gb|ELD11237.1| single-stranded DNA-binding protein [Escherichia coli KTE206]
gi|431001230|gb|ELD16817.1| single-stranded DNA-binding protein [Escherichia coli KTE208]
gi|431011972|gb|ELD26042.1| single-stranded DNA-binding protein [Escherichia coli KTE210]
gi|431012826|gb|ELD26586.1| single-stranded DNA-binding protein [Escherichia coli KTE212]
gi|431016500|gb|ELD30045.1| single-stranded DNA-binding protein [Escherichia coli KTE213]
gi|431025282|gb|ELD38393.1| single-stranded DNA-binding protein [Escherichia coli KTE216]
gi|431030129|gb|ELD43150.1| single-stranded DNA-binding protein [Escherichia coli KTE214]
gi|431034311|gb|ELD46252.1| single-stranded DNA-binding protein [Escherichia coli KTE220]
gi|431037385|gb|ELD48371.1| single-stranded DNA-binding protein [Escherichia coli KTE224]
gi|431046789|gb|ELD56882.1| single-stranded DNA-binding protein [Escherichia coli KTE230]
gi|431046865|gb|ELD56956.1| single-stranded DNA-binding protein [Escherichia coli KTE228]
gi|431058925|gb|ELD68302.1| single-stranded DNA-binding protein [Escherichia coli KTE233]
gi|431065916|gb|ELD74665.1| single-stranded DNA-binding protein [Escherichia coli KTE234]
gi|431066223|gb|ELD74967.1| single-stranded DNA-binding protein [Escherichia coli KTE235]
gi|431069519|gb|ELD77847.1| single-stranded DNA-binding protein [Escherichia coli KTE236]
gi|431075044|gb|ELD82579.1| single-stranded DNA-binding protein [Escherichia coli KTE237]
gi|431087984|gb|ELD93896.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
gi|431095847|gb|ELE01448.1| single-stranded DNA-binding protein [Escherichia coli KTE49]
gi|431102282|gb|ELE07108.1| single-stranded DNA-binding protein [Escherichia coli KTE51]
gi|431104553|gb|ELE08928.1| single-stranded DNA-binding protein [Escherichia coli KTE53]
gi|431110679|gb|ELE14597.1| single-stranded DNA-binding protein [Escherichia coli KTE56]
gi|431112873|gb|ELE16554.1| single-stranded DNA-binding protein [Escherichia coli KTE55]
gi|431124265|gb|ELE26917.1| single-stranded DNA-binding protein [Escherichia coli KTE57]
gi|431125161|gb|ELE27591.1| single-stranded DNA-binding protein [Escherichia coli KTE58]
gi|431134800|gb|ELE36743.1| single-stranded DNA-binding protein [Escherichia coli KTE60]
gi|431135315|gb|ELE37230.1| single-stranded DNA-binding protein [Escherichia coli KTE62]
gi|431135538|gb|ELE37414.1| single-stranded DNA-binding protein [Escherichia coli KTE66]
gi|431143513|gb|ELE45238.1| single-stranded DNA-binding protein [Escherichia coli KTE67]
gi|431145475|gb|ELE47125.1| single-stranded DNA-binding protein [Escherichia coli KTE72]
gi|431150303|gb|ELE51360.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
gi|431154507|gb|ELE55310.1| single-stranded DNA-binding protein [Escherichia coli KTE76]
gi|431166535|gb|ELE66850.1| single-stranded DNA-binding protein [Escherichia coli KTE80]
gi|431167169|gb|ELE67453.1| single-stranded DNA-binding protein [Escherichia coli KTE77]
gi|431175600|gb|ELE75602.1| single-stranded DNA-binding protein [Escherichia coli KTE81]
gi|431176548|gb|ELE76506.1| single-stranded DNA-binding protein [Escherichia coli KTE83]
gi|431177097|gb|ELE77035.1| single-stranded DNA-binding protein [Escherichia coli KTE86]
gi|431186385|gb|ELE85947.1| single-stranded DNA-binding protein [Escherichia coli KTE87]
gi|431186963|gb|ELE86495.1| single-stranded DNA-binding protein [Escherichia coli KTE93]
gi|431205132|gb|ELF03640.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
gi|431206114|gb|ELF04546.1| single-stranded DNA-binding protein [Escherichia coli KTE116]
gi|431209339|gb|ELF07448.1| single-stranded DNA-binding protein [Escherichia coli KTE142]
gi|431215512|gb|ELF13200.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
gi|431216428|gb|ELF14066.1| single-stranded DNA-binding protein [Escherichia coli KTE143]
gi|431226759|gb|ELF23917.1| single-stranded DNA-binding protein [Escherichia coli KTE156]
gi|431229559|gb|ELF26203.1| single-stranded DNA-binding protein [Escherichia coli KTE162]
gi|431233807|gb|ELF29393.1| single-stranded DNA-binding protein [Escherichia coli KTE161]
gi|431239237|gb|ELF33882.1| single-stranded DNA-binding protein [Escherichia coli KTE169]
gi|431248640|gb|ELF42833.1| single-stranded DNA-binding protein [Escherichia coli KTE171]
gi|431250357|gb|ELF44418.1| single-stranded DNA-binding protein [Escherichia coli KTE8]
gi|431254054|gb|ELF47530.1| single-stranded DNA-binding protein [Escherichia coli KTE6]
gi|431269072|gb|ELF60431.1| single-stranded DNA-binding protein [Escherichia coli KTE9]
gi|431269761|gb|ELF61066.1| single-stranded DNA-binding protein [Escherichia coli KTE17]
gi|431278372|gb|ELF69365.1| single-stranded DNA-binding protein [Escherichia coli KTE18]
gi|431279651|gb|ELF70605.1| single-stranded DNA-binding protein [Escherichia coli KTE45]
gi|431287449|gb|ELF78259.1| single-stranded DNA-binding protein [Escherichia coli KTE23]
gi|431288837|gb|ELF79593.1| single-stranded DNA-binding protein [Escherichia coli KTE43]
gi|431288908|gb|ELF79663.1| single-stranded DNA-binding protein [Escherichia coli KTE42]
gi|431292456|gb|ELF82844.1| single-stranded DNA-binding protein [Escherichia coli KTE29]
gi|431298518|gb|ELF88143.1| single-stranded DNA-binding protein [Escherichia coli KTE22]
gi|431304263|gb|ELF92795.1| single-stranded DNA-binding protein [Escherichia coli KTE46]
gi|431314635|gb|ELG02568.1| single-stranded DNA-binding protein [Escherichia coli KTE48]
gi|431321258|gb|ELG08871.1| single-stranded DNA-binding protein [Escherichia coli KTE50]
gi|431322979|gb|ELG10536.1| single-stranded DNA-binding protein [Escherichia coli KTE54]
gi|431333166|gb|ELG20381.1| single-stranded DNA-binding protein [Escherichia coli KTE59]
gi|431333551|gb|ELG20738.1| single-stranded DNA-binding protein [Escherichia coli KTE63]
gi|431334351|gb|ELG21513.1| single-stranded DNA-binding protein [Escherichia coli KTE65]
gi|431344159|gb|ELG31113.1| single-stranded DNA-binding protein [Escherichia coli KTE78]
gi|431346819|gb|ELG33713.1| single-stranded DNA-binding protein [Escherichia coli KTE79]
gi|431351529|gb|ELG38315.1| single-stranded DNA-binding protein [Escherichia coli KTE91]
gi|431353347|gb|ELG40101.1| single-stranded DNA-binding protein [Escherichia coli KTE84]
gi|431358566|gb|ELG45217.1| single-stranded DNA-binding protein [Escherichia coli KTE101]
gi|431358883|gb|ELG45528.1| single-stranded DNA-binding protein [Escherichia coli KTE115]
gi|431372085|gb|ELG57781.1| single-stranded DNA-binding protein [Escherichia coli KTE118]
gi|431377010|gb|ELG62149.1| single-stranded DNA-binding protein [Escherichia coli KTE123]
gi|431381258|gb|ELG65889.1| single-stranded DNA-binding protein [Escherichia coli KTE135]
gi|431389928|gb|ELG73637.1| single-stranded DNA-binding protein [Escherichia coli KTE136]
gi|431394124|gb|ELG77665.1| single-stranded DNA-binding protein [Escherichia coli KTE140]
gi|431396130|gb|ELG79616.1| single-stranded DNA-binding protein [Escherichia coli KTE144]
gi|431399577|gb|ELG82982.1| single-stranded DNA-binding protein [Escherichia coli KTE141]
gi|431406415|gb|ELG89635.1| single-stranded DNA-binding protein [Escherichia coli KTE147]
gi|431410688|gb|ELG93844.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
gi|431416485|gb|ELG98971.1| single-stranded DNA-binding protein [Escherichia coli KTE154]
gi|431422152|gb|ELH04346.1| single-stranded DNA-binding protein [Escherichia coli KTE158]
gi|431425652|gb|ELH07721.1| single-stranded DNA-binding protein [Escherichia coli KTE194]
gi|431427716|gb|ELH09659.1| single-stranded DNA-binding protein [Escherichia coli KTE165]
gi|431432989|gb|ELH14664.1| single-stranded DNA-binding protein [Escherichia coli KTE192]
gi|431450349|gb|ELH30836.1| single-stranded DNA-binding protein [Escherichia coli KTE190]
gi|431450483|gb|ELH30969.1| single-stranded DNA-binding protein [Escherichia coli KTE173]
gi|431451596|gb|ELH32068.1| single-stranded DNA-binding protein [Escherichia coli KTE175]
gi|431458478|gb|ELH38802.1| single-stranded DNA-binding protein [Escherichia coli KTE184]
gi|431459113|gb|ELH39429.1| single-stranded DNA-binding protein [Escherichia coli KTE183]
gi|431466065|gb|ELH46144.1| single-stranded DNA-binding protein [Escherichia coli KTE196]
gi|431475189|gb|ELH54993.1| single-stranded DNA-binding protein [Escherichia coli KTE203]
gi|431476589|gb|ELH56379.1| single-stranded DNA-binding protein [Escherichia coli KTE197]
gi|431484688|gb|ELH64362.1| single-stranded DNA-binding protein [Escherichia coli KTE209]
gi|431484878|gb|ELH64549.1| single-stranded DNA-binding protein [Escherichia coli KTE202]
gi|431488987|gb|ELH68616.1| single-stranded DNA-binding protein [Escherichia coli KTE207]
gi|431492265|gb|ELH71867.1| single-stranded DNA-binding protein [Escherichia coli KTE215]
gi|431500576|gb|ELH79590.1| single-stranded DNA-binding protein [Escherichia coli KTE211]
gi|431501544|gb|ELH80525.1| single-stranded DNA-binding protein [Escherichia coli KTE217]
gi|431513098|gb|ELH91184.1| single-stranded DNA-binding protein [Escherichia coli KTE218]
gi|431520037|gb|ELH97466.1| single-stranded DNA-binding protein [Escherichia coli KTE223]
gi|431520464|gb|ELH97790.1| single-stranded DNA-binding protein [Escherichia coli KTE229]
gi|431520800|gb|ELH98120.1| single-stranded DNA-binding protein [Escherichia coli KTE227]
gi|431525332|gb|ELI02129.1| single-stranded DNA-binding protein [Escherichia coli KTE104]
gi|431525842|gb|ELI02616.1| single-stranded DNA-binding protein [Escherichia coli KTE105]
gi|431529162|gb|ELI05865.1| single-stranded DNA-binding protein [Escherichia coli KTE106]
gi|431538863|gb|ELI14843.1| single-stranded DNA-binding protein [Escherichia coli KTE109]
gi|431544861|gb|ELI19672.1| single-stranded DNA-binding protein [Escherichia coli KTE112]
gi|431547081|gb|ELI21463.1| single-stranded DNA-binding protein [Escherichia coli KTE113]
gi|431550763|gb|ELI24751.1| single-stranded DNA-binding protein [Escherichia coli KTE117]
gi|431560803|gb|ELI34310.1| single-stranded DNA-binding protein [Escherichia coli KTE120]
gi|431564319|gb|ELI37495.1| single-stranded DNA-binding protein [Escherichia coli KTE122]
gi|431564807|gb|ELI37974.1| single-stranded DNA-binding protein [Escherichia coli KTE124]
gi|431577147|gb|ELI49799.1| single-stranded DNA-binding protein [Escherichia coli KTE125]
gi|431577659|gb|ELI50289.1| single-stranded DNA-binding protein [Escherichia coli KTE128]
gi|431581005|gb|ELI53460.1| single-stranded DNA-binding protein [Escherichia coli KTE129]
gi|431592003|gb|ELI62910.1| single-stranded DNA-binding protein [Escherichia coli KTE131]
gi|431596868|gb|ELI66809.1| single-stranded DNA-binding protein [Escherichia coli KTE133]
gi|431599333|gb|ELI69040.1| single-stranded DNA-binding protein [Escherichia coli KTE137]
gi|431605815|gb|ELI75202.1| single-stranded DNA-binding protein [Escherichia coli KTE138]
gi|431611443|gb|ELI80721.1| single-stranded DNA-binding protein [Escherichia coli KTE139]
gi|431614419|gb|ELI83573.1| single-stranded DNA-binding protein [Escherichia coli KTE145]
gi|431622677|gb|ELI91364.1| single-stranded DNA-binding protein [Escherichia coli KTE148]
gi|431623376|gb|ELI92048.1| single-stranded DNA-binding protein [Escherichia coli KTE150]
gi|431629540|gb|ELI97902.1| single-stranded DNA-binding protein [Escherichia coli KTE153]
gi|431637688|gb|ELJ05742.1| single-stranded DNA-binding protein [Escherichia coli KTE157]
gi|431639144|gb|ELJ07015.1| single-stranded DNA-binding protein [Escherichia coli KTE160]
gi|431640976|gb|ELJ08721.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
gi|431652456|gb|ELJ19606.1| single-stranded DNA-binding protein [Escherichia coli KTE166]
gi|431654285|gb|ELJ21344.1| single-stranded DNA-binding protein [Escherichia coli KTE167]
gi|431656348|gb|ELJ23335.1| single-stranded DNA-binding protein [Escherichia coli KTE168]
gi|431666338|gb|ELJ32980.1| single-stranded DNA-binding protein [Escherichia coli KTE174]
gi|431668946|gb|ELJ35385.1| single-stranded DNA-binding protein [Escherichia coli KTE176]
gi|431672205|gb|ELJ38477.1| single-stranded DNA-binding protein [Escherichia coli KTE177]
gi|431682317|gb|ELJ48084.1| single-stranded DNA-binding protein [Escherichia coli KTE179]
gi|431682752|gb|ELJ48401.1| single-stranded DNA-binding protein [Escherichia coli KTE180]
gi|431685683|gb|ELJ51251.1| single-stranded DNA-binding protein [Escherichia coli KTE232]
gi|431696980|gb|ELJ62129.1| single-stranded DNA-binding protein [Escherichia coli KTE82]
gi|431700415|gb|ELJ65394.1| single-stranded DNA-binding protein [Escherichia coli KTE85]
gi|431700593|gb|ELJ65570.1| single-stranded DNA-binding protein [Escherichia coli KTE88]
gi|431712309|gb|ELJ76606.1| single-stranded DNA-binding protein [Escherichia coli KTE90]
gi|431714761|gb|ELJ78940.1| single-stranded DNA-binding protein [Escherichia coli KTE95]
gi|431715596|gb|ELJ79743.1| single-stranded DNA-binding protein [Escherichia coli KTE94]
gi|431727603|gb|ELJ91358.1| single-stranded DNA-binding protein [Escherichia coli KTE97]
gi|431730607|gb|ELJ94170.1| single-stranded DNA-binding protein [Escherichia coli KTE99]
gi|432345510|gb|ELL40013.1| single-stranded DNA-binding protein [Escherichia coli J96]
gi|441605235|emb|CCP97834.1| Single-stranded DNA-binding protein [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441652531|emb|CCQ02073.1| Single-stranded DNA-binding protein [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|441713099|emb|CCQ06628.1| Single-stranded DNA-binding protein [Escherichia coli Nissle 1917]
gi|443420077|gb|AGC84981.1| single-stranded DNA-binding protein [Escherichia coli APEC O78]
gi|444534547|gb|ELV14773.1| single-stranded DNA-binding protein [Escherichia coli 99.0814]
gi|444535518|gb|ELV15589.1| single-stranded DNA-binding protein [Escherichia coli 09BKT078844]
gi|444544872|gb|ELV23862.1| single-stranded DNA-binding protein [Escherichia coli 99.0815]
gi|444553609|gb|ELV31219.1| single-stranded DNA-binding protein [Escherichia coli 99.0816]
gi|444553967|gb|ELV31556.1| single-stranded DNA-binding protein [Escherichia coli 99.0839]
gi|444558644|gb|ELV35919.1| single-stranded DNA-binding protein [Escherichia coli 99.0848]
gi|444568139|gb|ELV44833.1| single-stranded DNA-binding protein [Escherichia coli 99.1753]
gi|444571388|gb|ELV47872.1| single-stranded DNA-binding protein [Escherichia coli 99.1775]
gi|444574958|gb|ELV51216.1| single-stranded DNA-binding protein [Escherichia coli 99.1793]
gi|444587421|gb|ELV62875.1| single-stranded DNA-binding protein [Escherichia coli 99.1805]
gi|444588259|gb|ELV63644.1| single-stranded DNA-binding protein [Escherichia coli ATCC 700728]
gi|444588734|gb|ELV64098.1| single-stranded DNA-binding protein [Escherichia coli PA11]
gi|444602358|gb|ELV77100.1| single-stranded DNA-binding protein [Escherichia coli PA19]
gi|444602477|gb|ELV77218.1| single-stranded DNA-binding protein [Escherichia coli PA13]
gi|444611531|gb|ELV85858.1| single-stranded DNA-binding protein [Escherichia coli PA2]
gi|444618079|gb|ELV92178.1| single-stranded DNA-binding protein [Escherichia coli PA47]
gi|444619384|gb|ELV93425.1| single-stranded DNA-binding protein [Escherichia coli PA48]
gi|444625645|gb|ELV99465.1| single-stranded DNA-binding protein [Escherichia coli PA8]
gi|444634495|gb|ELW07967.1| single-stranded DNA-binding protein [Escherichia coli 7.1982]
gi|444636119|gb|ELW09522.1| single-stranded DNA-binding protein [Escherichia coli 99.1781]
gi|444641090|gb|ELW14331.1| single-stranded DNA-binding protein [Escherichia coli 99.1762]
gi|444650488|gb|ELW23316.1| single-stranded DNA-binding protein [Escherichia coli PA35]
gi|444656510|gb|ELW29034.1| single-stranded DNA-binding protein [Escherichia coli 3.4880]
gi|444658571|gb|ELW31022.1| single-stranded DNA-binding protein [Escherichia coli 95.0083]
gi|444666179|gb|ELW38257.1| single-stranded DNA-binding protein [Escherichia coli 99.0670]
gi|449313068|gb|EMD03298.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
gi|449313527|gb|EMD03733.1| single-stranded DNA-binding protein [Escherichia coli S17]
gi|449315515|gb|EMD05657.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 178
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|418828028|ref|ZP_13383114.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|421887273|ref|ZP_16318434.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|379983171|emb|CCF90707.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|392794873|gb|EJA51261.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
Length = 152
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 10/132 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G+VGQ P + SG ++ T +++ E + TE WH
Sbjct: 5 GVNKVIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKELTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV+V +L VV +++ G +Y EG L + + D +G R E+ + NG + LG
Sbjct: 57 RVAVVG-KLAEVVSQYVKKGDQVYFEGMLRTRKWQDQ-SGQDRYTTEVHVGINGVMQMLG 114
Query: 200 KGGDAQPPSPSE 211
GD++ + S+
Sbjct: 115 GTGDSKQQAASK 126
>gi|194437892|ref|ZP_03069986.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
gi|194423113|gb|EDX39106.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
Length = 173
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQFRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|71729738|gb|EAO31839.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
Length = 172
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K +SG T+T SL T R +R E +WH
Sbjct: 28 GINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGNTQER---------TEWH 78
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RV + +LG + ++L GS Y+EG + F G R + EI
Sbjct: 79 RVKFFG-KLGEIAAEYLHKGSQCYIEGAIRYDKFTGQ-DGQERYVTEI 124
>gi|260767311|ref|ZP_05876251.1| single-stranded DNA-binding protein [Vibrio furnissii CIP 102972]
gi|260617718|gb|EEX42897.1| single-stranded DNA-binding protein [Vibrio furnissii CIP 102972]
Length = 177
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGSDPEVRYMPSGGAVANITVATSETWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVALYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGTMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|91794661|ref|YP_564312.1| single-strand binding protein [Shewanella denitrificans OS217]
gi|91716663|gb|ABE56589.1| single-strand binding protein [Shewanella denitrificans OS217]
Length = 231
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG +GQ P + + +G V ++ T +++ + E +WH
Sbjct: 5 GVNKVIIVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D +G + EI + ++G + LG
Sbjct: 56 RVVMF-GKLAEITGEYLRKGSQVYLEGKLQTRKWKD-QSGQDKYTTEIVVDQSGSMQMLG 113
Query: 200 KGGDAQPPSPSEVRGA 215
Q PS + +G+
Sbjct: 114 SRNQNQGPSQAGSQGS 129
>gi|27379809|ref|NP_771338.1| single-stranded DNA-binding protein [Bradyrhizobium japonicum USDA
110]
gi|37999424|sp|Q89L50.1|SSB_BRAJA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|27352962|dbj|BAC49963.1| single-strand DNA binding protein [Bradyrhizobium japonicum USDA
110]
Length = 164
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|417977723|ref|ZP_12618503.1| single-stranded DNA-binding protein [Escherichia coli XH001]
gi|344192585|gb|EGV46675.1| single-stranded DNA-binding protein [Escherichia coli XH001]
Length = 178
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|345875109|ref|ZP_08826905.1| hypothetical protein l11_09890 [Neisseria weaveri LMG 5135]
gi|417958194|ref|ZP_12601110.1| hypothetical protein l13_15220 [Neisseria weaveri ATCC 51223]
gi|343967256|gb|EGV35505.1| hypothetical protein l13_15220 [Neisseria weaveri ATCC 51223]
gi|343969536|gb|EGV37748.1| hypothetical protein l11_09890 [Neisseria weaveri LMG 5135]
Length = 177
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + + +G V FS+ T + N+R + + TE WH ++
Sbjct: 6 KVILIGNLGRDPEIRYMPNGEAVCNFSIATSEVWNDRNSGQRQERTE--------WHNIT 57
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN--DPITGLV-----RRIREIAIRRNGRL 195
+Y RL V ++L GS++Y+EG ++ + + D I + ++ + R G
Sbjct: 58 LY-RRLAEVAGQYLRKGSSVYIEGRIQSRKYTGKDGIERMAFDIIGSEMKMLGSRSGGSS 116
Query: 196 VFLGKGGDAQPPSP 209
G GG QP +P
Sbjct: 117 AEYGDGG-YQPSAP 129
>gi|307544700|ref|YP_003897179.1| single-strand DNA-binding protein [Halomonas elongata DSM 2581]
gi|307216724|emb|CBV41994.1| K03111 single-strand DNA-binding protein [Halomonas elongata DSM
2581]
Length = 169
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G VGQ P + +SG V +L T +++ + + TE WH
Sbjct: 4 GINKVILIGNVGQDPEIRFTQSGTPVGNINLATSDTWTDKQSGQRQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
R+ V+ RL V +++ GS +YVEG L+ + + D +G R + EI +
Sbjct: 56 RLIVF-RRLAEVAQQYVRKGSKLYVEGRLQTRKWQDQ-SGQDRYVTEIIV 103
>gi|119386513|ref|YP_917568.1| single-strand binding protein [Paracoccus denitrificans PD1222]
gi|119377108|gb|ABL71872.1| single-strand binding protein [Paracoccus denitrificans PD1222]
Length = 170
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +GQ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGQDPEVRSFQNGGKVANLRIATSEQWKDRNTGERRERTE--------WHT 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V +Y E L V + L GS +YVEG LE + + D +G R E+A+R
Sbjct: 57 VVIYSEPLVRVAEQFLKKGSKVYVEGQLETRKWQDQ-SGNDRYSTEVALR 105
>gi|190572049|ref|YP_001966291.1| Ssb [Pseudomonas sp. CT14]
gi|75707032|gb|ABA25995.1| Ssb [Pseudomonas sp. CT14]
Length = 183
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLLG 112
Query: 200 -------KGGD 203
+GGD
Sbjct: 113 GRPQNQQQGGD 123
>gi|421674098|ref|ZP_16114034.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|410385441|gb|EKP37934.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
Length = 117
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG VG +P+ K +G + FS+ T ++R + TE WH
Sbjct: 3 GVNKVILVGMVGANPISKHFPNGGSYAQFSIATSEKYQDKRTGDWIENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RI-VANNRLGEIACQFLKKGSKVYIEGSLHTRKWTD 89
>gi|423118079|ref|ZP_17105763.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5246]
gi|376402412|gb|EHT15006.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5246]
Length = 175
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + EI + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEIVVNVGGTMQMLG 114
>gi|349688120|ref|ZP_08899262.1| single-strand DNA-binding protein Ssb [Gluconacetobacter oboediens
174Bp2]
gi|349688339|ref|ZP_08899481.1| single-strand DNA-binding protein Ssb [Gluconacetobacter oboediens
174Bp2]
Length = 156
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGR-TVTLFSLGTGGIRNNRRPLENENPTEYANRCA 135
+ + +AI++G +G+ P + G + F + T +R E T
Sbjct: 1 MSQSVNRAIIIGHLGRDPDLAARREGEGKIASFGVATSETWTDRASGERREKT------- 53
Query: 136 VQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGR 194
QWHRV + + L V+ + G+ +YVEG+LE + + D G R + EI I R +G
Sbjct: 54 -QWHRVVSFNDHLSAVIERRCQKGTLVYVEGHLETRKWTDQ-QGQDRYVTEIIIDRFDGN 111
Query: 195 LVFLGKG 201
L L G
Sbjct: 112 LKVLANG 118
>gi|307313329|ref|ZP_07592952.1| single-strand binding protein [Escherichia coli W]
gi|378715405|ref|YP_005280296.1| single-strand binding protein [Escherichia coli KO11FL]
gi|386611789|ref|YP_006127288.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|386707726|ref|YP_006176167.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|417637166|ref|ZP_12287361.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|418832123|ref|ZP_13387067.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|306906751|gb|EFN37261.1| single-strand binding protein [Escherichia coli W]
gi|315063706|gb|ADT78032.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|323380959|gb|ADX53226.1| single-strand binding protein [Escherichia coli KO11FL]
gi|345381115|gb|EGX13001.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|383394846|gb|AFH14381.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|392798011|gb|EJA54300.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
Length = 175
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|194447081|ref|YP_002039094.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|422372658|ref|ZP_16453011.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|425135170|ref|ZP_18535972.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|432847568|ref|ZP_20079806.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE141]
gi|194358525|gb|ACF56969.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|315295576|gb|EFU54900.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|408575693|gb|EKK51345.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|431391340|gb|ELG74987.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE141]
Length = 175
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|445453572|ref|ZP_21445173.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
gi|444753366|gb|ELW78020.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
Length = 200
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 85 ILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVY 144
ILVG +G+ P K +G ++T FS+ T + ++ E + TE WHR+ ++
Sbjct: 15 ILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTE--------WHRIVLH 66
Query: 145 PERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 67 -NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 107
>gi|404319224|ref|ZP_10967157.1| single-strand binding protein [Ochrobactrum anthropi CTS-325]
Length = 172
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDVVAHLRIATSESWRDRQSGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|60115630|ref|YP_209421.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|193063136|ref|ZP_03044228.1| single-stranded DNA-binding protein [Escherichia coli E22]
gi|226201020|ref|YP_002756632.1| single-stranded DNA-binding protein [Escherichia coli]
gi|300998489|ref|ZP_07181970.1| single-strand binding family protein [Escherichia coli MS 200-1]
gi|302651684|ref|YP_003829065.1| single-stranded DNA-binding protein [Escherichia coli]
gi|317054693|ref|YP_004119760.1| Ssb [Escherichia coli]
gi|386730474|ref|YP_006200886.1| hypothetical protein STM474_p228 [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|386730579|ref|YP_006203557.1| single-stranded DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|407484738|ref|YP_006781774.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2011C-3493]
gi|410496021|ref|YP_006903537.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|410592531|ref|YP_006952328.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|410593621|ref|YP_006954388.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410653958|ref|YP_006957245.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|410654401|ref|YP_006957982.1| single-stranded DNA-binding protein Ssb' [Salmonella enterica
subsp. enterica serovar Derby]
gi|417198154|ref|ZP_12016575.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
gi|417808774|ref|ZP_12455529.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
LB226692]
gi|417868229|ref|ZP_12513259.1| hypothetical protein C22711_5152 [Escherichia coli O104:H4 str.
C227-11]
gi|418042260|ref|ZP_12680464.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
gi|418306172|ref|ZP_12917965.1| single-stranded DNA-binding protein Ssb [Escherichia coli UMNF18]
gi|418776245|ref|ZP_13332193.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|419287204|ref|ZP_13829356.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10F]
gi|419343355|ref|ZP_13884758.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|419703468|ref|ZP_14231034.1| single-stranded DNA-binding protein [Escherichia coli SCI-07]
gi|419730050|ref|ZP_14257003.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419735437|ref|ZP_14262315.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419740711|ref|ZP_14267433.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419895279|ref|ZP_14415118.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9574]
gi|419942267|ref|ZP_14458873.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|420323647|ref|ZP_14825441.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri CCH060]
gi|421827774|ref|ZP_16263107.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|422789160|ref|ZP_16841892.1| single-strand binding protein [Escherichia coli H489]
gi|422842348|ref|ZP_16890306.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|422992260|ref|ZP_16983027.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. C227-11]
gi|422997313|ref|ZP_16988074.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. C236-11]
gi|423012657|ref|ZP_17003386.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-3677]
gi|423023945|ref|ZP_17014647.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4404]
gi|423029106|ref|ZP_17019798.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4522]
gi|423034254|ref|ZP_17024937.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4623]
gi|423039431|ref|ZP_17030104.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|423044472|ref|ZP_17035138.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|423049617|ref|ZP_17040272.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|423056560|ref|ZP_17045364.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|423061718|ref|ZP_17050513.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|423705271|ref|ZP_17679690.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|424490451|ref|ZP_17938945.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|424768492|ref|ZP_18195767.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425376333|ref|ZP_18760874.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|429775564|ref|ZP_19307558.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02030]
gi|429780886|ref|ZP_19312828.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429784802|ref|ZP_19316708.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02092]
gi|429790517|ref|ZP_19322385.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02093]
gi|429796370|ref|ZP_19328190.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02281]
gi|429802295|ref|ZP_19334067.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02318]
gi|429805925|ref|ZP_19337667.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02913]
gi|429811522|ref|ZP_19343218.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-03439]
gi|429816876|ref|ZP_19348528.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-04080]
gi|429822082|ref|ZP_19353691.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-03943]
gi|429938201|ref|ZP_19404080.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429943342|ref|ZP_19409210.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429948460|ref|ZP_19414314.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429958722|ref|ZP_19424550.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec12-0466]
gi|432483387|ref|ZP_19725332.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE210]
gi|432483402|ref|ZP_19725344.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE210]
gi|432502880|ref|ZP_19744621.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|432590488|ref|ZP_19826832.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|432823233|ref|ZP_20056919.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|432828214|ref|ZP_20061857.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|433108961|ref|ZP_20294867.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
gi|45758188|gb|AAS76400.1| single-stranded DNA binding protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|192931395|gb|EDV83997.1| single-stranded DNA-binding protein [Escherichia coli E22]
gi|219881649|gb|ACL52019.1| single-stranded DNA-binding protein [Escherichia coli]
gi|284433221|gb|ADB84960.1| Ssb [Escherichia coli]
gi|300304006|gb|EFJ58526.1| single-strand binding family protein [Escherichia coli MS 200-1]
gi|302310087|gb|ADL13959.1| Ssb [Escherichia coli]
gi|321271408|gb|ADW79498.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|321271708|gb|ADW79795.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|323133087|gb|ADX20515.1| hypothetical protein STM474_p228 [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|323959167|gb|EGB54833.1| single-strand binding protein [Escherichia coli H489]
gi|339418272|gb|AEJ59941.1| single-stranded DNA-binding protein Ssb [Escherichia coli UMNF18]
gi|340736634|gb|EGR71059.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
LB226692]
gi|341921518|gb|EGT71117.1| hypothetical protein C22711_5152 [Escherichia coli O104:H4 str.
C227-11]
gi|354855964|gb|EHF16431.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. C236-11]
gi|354856089|gb|EHF16555.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. C227-11]
gi|354874118|gb|EHF34493.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-3677]
gi|354874168|gb|EHF34541.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4404]
gi|354879209|gb|EHF39548.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4522]
gi|354886994|gb|EHF47274.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4623]
gi|354892171|gb|EHF52382.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|354896925|gb|EHF57088.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|354903470|gb|EHF63571.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|354909483|gb|EHF69515.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|354910992|gb|EHF70999.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|371601201|gb|EHN89961.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|378123000|gb|EHW84420.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10F]
gi|378178232|gb|EHX39002.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|380345352|gb|EIA33674.1| single-stranded DNA-binding protein [Escherichia coli SCI-07]
gi|381139633|emb|CCF76844.1| single-stranded DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|381288803|gb|AFG21692.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|381293692|gb|EIC34834.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381294876|gb|EIC36003.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381295248|gb|EIC36366.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|383474813|gb|EID66788.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
gi|385704326|gb|EIG41404.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|386188587|gb|EIH77381.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
gi|388361570|gb|EIL25671.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9574]
gi|388423141|gb|EIL82687.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|390797525|gb|EIO64767.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|391258490|gb|EIQ17588.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri CCH060]
gi|392746476|gb|EJA03485.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|396582653|gb|AFN88356.1| single-stranded DNA-binding protein [Escherichia coli]
gi|407056923|gb|AFS76973.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2011C-3493]
gi|408073826|gb|EKH08130.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|408313380|gb|EKJ30028.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|408795313|gb|AFU91682.1| single-stranded DNA-binding protein Ssb' [Salmonella enterica
subsp. enterica serovar Derby]
gi|421946073|gb|EKU03231.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|429349190|gb|EKY85938.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429349324|gb|EKY86070.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02030]
gi|429350329|gb|EKY87061.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02092]
gi|429363762|gb|EKZ00388.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02093]
gi|429365216|gb|EKZ01830.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02281]
gi|429368207|gb|EKZ04797.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02318]
gi|429380272|gb|EKZ16764.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02913]
gi|429381930|gb|EKZ18404.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-03439]
gi|429382103|gb|EKZ18569.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-03943]
gi|429394325|gb|EKZ30702.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-04080]
gi|429422728|gb|EKZ58841.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429430642|gb|EKZ66701.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429439529|gb|EKZ75511.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429446874|gb|EKZ82800.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec12-0466]
gi|431002852|gb|ELD18351.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE210]
gi|431002871|gb|ELD18364.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE210]
gi|431024788|gb|ELD37930.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|431116396|gb|ELE19843.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|431365059|gb|ELG51578.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|431370510|gb|ELG56307.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|431618696|gb|ELI87662.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
Length = 175
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|420289744|ref|ZP_14791915.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|390803207|gb|EIO70226.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
Length = 175
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|148560153|ref|YP_001259025.1| single-stranded DNA-binding protein family [Brucella ovis ATCC
25840]
gi|148371410|gb|ABQ61389.1| single-stranded DNA-binding protein family [Brucella ovis ATCC
25840]
Length = 168
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|307132498|ref|YP_003884514.1| ssDNA-binding protein [Dickeya dadantii 3937]
gi|306530027|gb|ADM99957.1| Single-stranded DNA-binding protein [Dickeya dadantii 3937]
Length = 181
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV++Y +L + ++L GS +Y+EG L + + D G R E+ + +G + L
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVVDISGSMQML 113
>gi|251788330|ref|YP_003003051.1| single-strand binding protein [Dickeya zeae Ech1591]
gi|247536951|gb|ACT05572.1| single-strand binding protein [Dickeya zeae Ech1591]
Length = 182
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQKERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV++Y +L + ++L GS +Y+EG L + + D G R E+ + +G + L
Sbjct: 57 RVALYG-KLAEIAGEYLRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVVDISGSMQML 113
>gi|426400698|ref|YP_007019670.1| ssDNA-binding protein [Candidatus Endolissoclinum patella L2]
gi|425857366|gb|AFX98402.1| single-strand binding family protein [Candidatus Endolissoclinum
patella L2]
Length = 162
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I KAIL+G +G+ P + + G + ++ T ++ + TE WHR
Sbjct: 5 INKAILIGNLGRDPEVRFTQDGIKIVNLAIATSDRWRDKNSGDQRERTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ E L + ++L GS +Y+EG L+ + ++D G R +I ++R G+L LG
Sbjct: 57 VVIFNENLARLAEQYLRKGSLVYIEGQLQTRKWSDQ-NGHERYSTDIVLQRYRGQLAMLG 115
Query: 200 KG 201
G
Sbjct: 116 NG 117
>gi|398820051|ref|ZP_10578591.1| single stranded DNA-binding protein [Bradyrhizobium sp. YR681]
gi|398229309|gb|EJN15391.1| single stranded DNA-binding protein [Bradyrhizobium sp. YR681]
Length = 165
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|383771705|ref|YP_005450770.1| single-strand DNA binding protein RecBCD nuclease [Bradyrhizobium
sp. S23321]
gi|381359828|dbj|BAL76658.1| single-strand DNA binding protein RecBCD nuclease [Bradyrhizobium
sp. S23321]
Length = 165
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|384218709|ref|YP_005609875.1| single-strand DNA-binding protein [Bradyrhizobium japonicum USDA 6]
gi|354957608|dbj|BAL10287.1| single-strand DNA-binding protein [Bradyrhizobium japonicum USDA 6]
Length = 165
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L G+ +Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|227326029|ref|ZP_03830053.1| single-strand DNA-binding protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
gi|403059946|ref|YP_006648163.1| single-strand DNA-binding protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807272|gb|AFR04910.1| single-strand DNA-binding protein [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 181
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|188535202|ref|YP_001908999.1| ssDNA-binding protein [Erwinia tasmaniensis Et1/99]
gi|188030244|emb|CAO98131.1| Single-strand binding protein [Erwinia tasmaniensis Et1/99]
Length = 182
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQMLG 114
>gi|374334634|ref|YP_005091321.1| single-strand binding protein [Oceanimonas sp. GK1]
gi|372984321|gb|AEY00571.1| single-strand binding protein [Oceanimonas sp. GK1]
Length = 195
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVILIGHLGQDPEVRYMPNGNAVANITLATSETWRDKQSGEQRERTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV V+ +L + ++L GS +YVEG L+ + + D G R E+ + + G + L
Sbjct: 57 RV-VFFGKLAEIAGEYLRKGSQVYVEGRLQTRKWQDQ-GGQDRYTTEVVVDQGGTMQML 113
>gi|421082521|ref|ZP_15543404.1| Single-stranded DNA-binding protein [Pectobacterium wasabiae CFBP
3304]
gi|401702758|gb|EJS92998.1| Single-stranded DNA-binding protein [Pectobacterium wasabiae CFBP
3304]
Length = 181
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|419292887|ref|ZP_13834955.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11B]
gi|419804840|ref|ZP_14329990.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AI27]
gi|378148714|gb|EHX09850.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11B]
gi|384472119|gb|EIE56180.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AI27]
Length = 175
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|261822898|ref|YP_003261004.1| single-stranded DNA-binding protein [Pectobacterium wasabiae
WPP163]
gi|261606911|gb|ACX89397.1| single-strand binding protein [Pectobacterium wasabiae WPP163]
gi|385873345|gb|AFI91865.1| Single-stranded DNA-binding protein [Pectobacterium sp. SCC3193]
Length = 180
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWADQ-AGVERYTTEVVVNVGGTMQML 113
>gi|415835826|ref|ZP_11518390.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli RN587/1]
gi|419281304|ref|ZP_13823531.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10E]
gi|420392519|ref|ZP_14891769.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli EPEC C342-62]
gi|323191637|gb|EFZ76894.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli RN587/1]
gi|378121971|gb|EHW83418.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10E]
gi|391311777|gb|EIQ69408.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli EPEC C342-62]
Length = 175
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|126175947|ref|YP_001052096.1| single-strand binding protein [Shewanella baltica OS155]
gi|152999106|ref|YP_001364787.1| ssDNA-binding protein [Shewanella baltica OS185]
gi|160873703|ref|YP_001553019.1| ssDNA-binding protein [Shewanella baltica OS195]
gi|373951050|ref|ZP_09611011.1| single-strand binding protein [Shewanella baltica OS183]
gi|378706947|ref|YP_005271841.1| single-strand binding protein [Shewanella baltica OS678]
gi|386323131|ref|YP_006019248.1| single-strand binding protein [Shewanella baltica BA175]
gi|386342700|ref|YP_006039066.1| single-strand binding protein [Shewanella baltica OS117]
gi|418025617|ref|ZP_12664594.1| single-strand binding protein [Shewanella baltica OS625]
gi|125999152|gb|ABN63227.1| single-strand binding protein [Shewanella baltica OS155]
gi|151363724|gb|ABS06724.1| single-strand binding protein [Shewanella baltica OS185]
gi|160859225|gb|ABX47759.1| single-strand binding protein [Shewanella baltica OS195]
gi|315265936|gb|ADT92789.1| single-strand binding protein [Shewanella baltica OS678]
gi|333817276|gb|AEG09942.1| single-strand binding protein [Shewanella baltica BA175]
gi|334865101|gb|AEH15572.1| single-strand binding protein [Shewanella baltica OS117]
gi|353534878|gb|EHC04443.1| single-strand binding protein [Shewanella baltica OS625]
gi|373887650|gb|EHQ16542.1| single-strand binding protein [Shewanella baltica OS183]
Length = 234
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V ++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ I ++G + L
Sbjct: 56 RVVLFG-KLAEITGEYLRKGSQVYLEGKLQTRKWKDQ-SGQDRYSTEVVIDQSGSMQMLG 113
Query: 199 --GKGGDAQ 205
G+GG AQ
Sbjct: 114 SRGQGGQAQ 122
>gi|395766576|ref|ZP_10447115.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
gi|395415700|gb|EJF82127.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
Length = 148
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G++G P K + SG + FS+ T +++ + TE WH V
Sbjct: 4 KVMLIGRLGADPESKTMNSGAEIVNFSIATSESYTDKKTNQKVEKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
++ L + +++L GS +YVEG L+ + + D
Sbjct: 56 IFNPHLAKIALQYLNKGSKVYVEGKLQTRKWQD 88
>gi|417631558|ref|ZP_12281786.1| single-stranded DNA-binding protein [Escherichia coli STEC_MHI813]
gi|345368794|gb|EGX00790.1| single-stranded DNA-binding protein [Escherichia coli STEC_MHI813]
Length = 178
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|451942145|ref|YP_007462782.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901532|gb|AGF75994.1| single-strand binding protein [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 172
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ E L VV ++L GS IY+EG L+ + + D G R EI +++ G L L G+
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLDGR 117
Query: 201 G 201
G
Sbjct: 118 G 118
>gi|417615730|ref|ZP_12266175.1| single-stranded DNA-binding protein [Escherichia coli STEC_EH250]
gi|345356877|gb|EGW89077.1| single-stranded DNA-binding protein [Escherichia coli STEC_EH250]
Length = 178
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLF-GKLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|417709438|ref|ZP_12358460.1| single-stranded DNA-binding protein [Shigella flexneri VA-6]
gi|420333268|ref|ZP_14834910.1| single-stranded DNA-binding protein [Shigella flexneri K-1770]
gi|332998128|gb|EGK17732.1| single-stranded DNA-binding protein [Shigella flexneri VA-6]
gi|391246766|gb|EIQ06024.1| single-stranded DNA-binding protein [Shigella flexneri K-1770]
Length = 178
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|119478100|ref|ZP_01618179.1| single-strand binding protein [marine gamma proteobacterium
HTCC2143]
gi|119448806|gb|EAW30049.1| single-strand binding protein [marine gamma proteobacterium
HTCC2143]
Length = 194
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P QK + +G VT +L T +++ + + TE WH
Sbjct: 4 GINKVILIGNLGNDPEQKSMPNGNAVTNITLATSESWKDKQTGQQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V+ RL + ++L GS +Y+EG+L + + D
Sbjct: 56 RI-VFFNRLAEIAGQYLNKGSKVYLEGSLRTRKWQD 90
>gi|421668653|ref|ZP_16108687.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|410379142|gb|EKP31747.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
Length = 117
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G +P+ K+ ++G + FS+ T ++R + TE WH
Sbjct: 3 GINKVILVGMLGANPIPKQFQNGGSYAQFSIATSEKYQDKRTGDWIENTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
R+ V RLG + + L GS +Y+EG+L + + D
Sbjct: 55 RI-VAHNRLGEIACQILKKGSKVYIEGSLHTRKWTD 89
>gi|398797367|ref|ZP_10556689.1| single stranded DNA-binding protein [Pantoea sp. GM01]
gi|398102921|gb|EJL93095.1| single stranded DNA-binding protein [Pantoea sp. GM01]
Length = 202
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V SL T +++ EN TE WH
Sbjct: 5 GVNKVILVGNLGQDPEIRYMPNGGAVANISLATSESWRDKQTGENREITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G L LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-SGQDKYSTEVVVNVGGTLQMLG 114
>gi|354596222|ref|ZP_09014239.1| single-strand binding protein [Brenneria sp. EniD312]
gi|353674157|gb|EHD20190.1| single-strand binding protein [Brenneria sp. EniD312]
Length = 181
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWTDQ-SGVDKYTTEVVVNIGGTMQML 113
>gi|300714922|ref|YP_003739725.1| ssDNA-binding protein [Erwinia billingiae Eb661]
gi|299060758|emb|CAX57865.1| Single-stranded DNA-binding protein [Erwinia billingiae Eb661]
Length = 182
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAAEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|293372580|ref|ZP_06618962.1| single-strand binding family protein [Bacteroides ovatus SD CMC 3f]
gi|292632389|gb|EFF50985.1| single-strand binding family protein [Bacteroides ovatus SD CMC 3f]
Length = 183
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K +G V F L T R +N T+ R +WH +
Sbjct: 29 KVILLGNVGQDPQVKYFDTGSAVATFRLAT-----TDRAYTLQNGTQVPERT--EWHNI- 80
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 81 VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIYV 126
>gi|254797103|ref|YP_003081941.1| single-strand binding protein [Neorickettsia risticii str.
Illinois]
gi|254590342|gb|ACT69704.1| single-strand binding protein [Neorickettsia risticii str.
Illinois]
Length = 151
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K IL+G +G+ P + + + + V FSL T N++ E + TE WH+
Sbjct: 2 INKVILIGNLGKDPEIRTMANAKQVATFSLATTENWNDKNTGERVSKTE--------WHQ 53
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V V+ E L V+ ++ G+ +Y+EG+L+ + + D G+ R E+ +
Sbjct: 54 VVVFNEPLIKVISNYVNKGTRLYIEGSLQTRKWTDN-NGIERYTTEVVL 101
>gi|425741495|ref|ZP_18859641.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
gi|425492229|gb|EKU58495.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
Length = 201
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 85 ILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVY 144
ILVG +G+ P K +G ++T FS+ T + ++ E + TE WHR+ ++
Sbjct: 15 ILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERKEQTE--------WHRIVLH 66
Query: 145 PERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
RLG + + L GS +Y+EG+L + + D G R EI
Sbjct: 67 -NRLGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 107
>gi|398796293|ref|ZP_10555906.1| single stranded DNA-binding protein [Pantoea sp. YR343]
gi|398203758|gb|EJM90575.1| single stranded DNA-binding protein [Pantoea sp. YR343]
Length = 184
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKTTGENKEITE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-AGQEKYTTEVVVNVGGTMQMLG 114
>gi|389691485|ref|ZP_10180279.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
gi|388588468|gb|EIM28758.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
Length = 166
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 15/144 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L +G V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRRLSNGEPVVNLRIATSETWKDKGTGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL- 198
V ++ E L V ++L GS +YVEG L+ + + D G + E+ ++R G L L
Sbjct: 57 VVIFNENLARVAEQYLKKGSKVYVEGQLQTRKWTDQ-QGQEKYTTEVVLQRFRGELTILD 115
Query: 199 --GKGGDAQ--PPSPSEVRGAGYF 218
G GG ++ P ++ G F
Sbjct: 116 SRGGGGASEYGDEEPGQISRGGDF 139
>gi|386283122|ref|ZP_10060756.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
sp. 4_1_40B]
gi|386119803|gb|EIG68446.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
sp. 4_1_40B]
Length = 173
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|120600326|ref|YP_964900.1| single-strand binding protein [Shewanella sp. W3-18-1]
gi|386312356|ref|YP_006008521.1| single-strand binding protein [Shewanella putrefaciens 200]
gi|120560419|gb|ABM26346.1| single-strand binding protein [Shewanella sp. W3-18-1]
gi|319424981|gb|ADV53055.1| single-strand binding protein [Shewanella putrefaciens 200]
Length = 236
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V ++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ I ++G + L
Sbjct: 56 RVVLFG-KLAEITGEYLRKGSQVYLEGKLQTRKWKDQ-SGQDRYSTEVVIDQSGSMQMLG 113
Query: 199 --GKGGDAQ 205
G+GG AQ
Sbjct: 114 SRGQGGQAQ 122
>gi|1490781|gb|AAB57885.1| single stranded DNA-binding protein [Shewanella sp. PT99]
Length = 227
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+ +Y RL + ++L GS +Y+EG L+ + D TG R EI L G
Sbjct: 56 NIVMY-RRLAEIAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEINAHEMQMLDSRG 114
Query: 200 KGGDAQ 205
+ G Q
Sbjct: 115 QSGGQQ 120
>gi|388259073|ref|ZP_10136247.1| single-strand binding protein [Cellvibrio sp. BR]
gi|387937031|gb|EIK43588.1| single-strand binding protein [Cellvibrio sp. BR]
Length = 196
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P K + SG VT S+ T ++ + + TE WH
Sbjct: 4 GINKVILIGNIGQDPEVKYMPSGGAVTNVSVATSETWKDKNTGQPQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV V+ RLG + ++L GS +Y+EG L + +
Sbjct: 56 RV-VFFNRLGEIAGEYLKKGSKVYIEGALRTRKW 88
>gi|18150888|ref|NP_542825.1| single-strand DNA-binding protein [Pseudomonas putida]
gi|37999726|sp|Q8VMM4.1|SSBW_PSEPU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|18077129|emb|CAC86765.1| putative SSB protein [Pseudomonas putida]
Length = 180
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 18/131 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + G + LG
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDMQGTMQLLG 112
Query: 200 -------KGGD 203
+GGD
Sbjct: 113 GRPQNQQQGGD 123
>gi|395790925|ref|ZP_10470384.1| single-strand binding protein [Bartonella alsatica IBS 382]
gi|395409221|gb|EJF75820.1| single-strand binding protein [Bartonella alsatica IBS 382]
Length = 172
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ E L V ++L GS IY+EG L+ + + D G R EI +++ G L L G+
Sbjct: 59 IFNENLVKVAEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLEGR 117
Query: 201 G--GDAQPPSPSEVRGAGY 217
G G Q ++V G+ Y
Sbjct: 118 GAPGGVQMHGENQV-GSNY 135
>gi|423712836|ref|ZP_17687134.1| single-strand binding protein [Bartonella washoensis Sb944nv]
gi|395410532|gb|EJF77086.1| single-strand binding protein [Bartonella washoensis Sb944nv]
Length = 172
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQK 106
>gi|312171143|emb|CBX79402.1| Single-stranded DNA-binding protein 2 SSB 2; Helix-destabilizing
protein 2 [Erwinia amylovora ATCC BAA-2158]
Length = 164
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K LVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVTLVGHLGQDPEVRSMPNGNAVAGLNLATSETWRDKQSGETREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+E + + + D G+ R E + NG + LG
Sbjct: 57 RVVLFG-KLAEVAAEYLRKGAQVYIEDQMRTRKWTDN-NGIDRWTTETVVGVNGTMQMLG 114
Query: 200 -------KGGDAQPPSPS 210
G +AQP S
Sbjct: 115 GRHGSDAGGNNAQPAQQS 132
>gi|306841829|ref|ZP_07474512.1| single-strand binding protein [Brucella sp. BO2]
gi|306288110|gb|EFM59504.1| single-strand binding protein [Brucella sp. BO2]
Length = 169
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|306843968|ref|ZP_07476563.1| single-strand binding protein [Brucella inopinata BO1]
gi|306275723|gb|EFM57447.1| single-strand binding protein [Brucella inopinata BO1]
Length = 169
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|23501980|ref|NP_698107.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|161619055|ref|YP_001592942.1| single-strand binding protein [Brucella canis ATCC 23365]
gi|163843371|ref|YP_001627775.1| single-strand binding protein [Brucella suis ATCC 23445]
gi|225627576|ref|ZP_03785613.1| single-strand binding protein [Brucella ceti str. Cudo]
gi|225852604|ref|YP_002732837.1| single-strand binding protein [Brucella melitensis ATCC 23457]
gi|256263903|ref|ZP_05466435.1| single-stranded DNA-binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|260566360|ref|ZP_05836830.1| single-stranded DNA-binding protein [Brucella suis bv. 4 str. 40]
gi|261214097|ref|ZP_05928378.1| helix-destabilizing protein [Brucella abortus bv. 3 str. Tulya]
gi|261219450|ref|ZP_05933731.1| single-stranded DNA-binding protein [Brucella ceti M13/05/1]
gi|261222270|ref|ZP_05936551.1| single-stranded DNA-binding protein [Brucella ceti B1/94]
gi|261314173|ref|ZP_05953370.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M163/99/10]
gi|261317738|ref|ZP_05956935.1| single-stranded DNA-binding protein [Brucella pinnipedialis B2/94]
gi|261321946|ref|ZP_05961143.1| single-stranded DNA-binding protein [Brucella ceti M644/93/1]
gi|261325193|ref|ZP_05964390.1| single-stranded DNA-binding protein [Brucella neotomae 5K33]
gi|261752409|ref|ZP_05996118.1| single-stranded DNA-binding protein [Brucella suis bv. 5 str. 513]
gi|261755069|ref|ZP_05998778.1| single-stranded DNA-binding protein [Brucella suis bv. 3 str. 686]
gi|261758294|ref|ZP_06002003.1| single-stranded DNA-binding protein [Brucella sp. F5/99]
gi|265988769|ref|ZP_06101326.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M292/94/1]
gi|265995020|ref|ZP_06107577.1| single-stranded DNA-binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|340790721|ref|YP_004756186.1| single-stranded DNA-binding protein family [Brucella pinnipedialis
B2/94]
gi|376276284|ref|YP_005116723.1| single-strand binding protein [Brucella canis HSK A52141]
gi|376280774|ref|YP_005154780.1| ssDNA-binding protein [Brucella suis VBI22]
gi|384211468|ref|YP_005600550.1| single-strand binding protein [Brucella melitensis M5-90]
gi|384224768|ref|YP_005615932.1| ssDNA-binding protein [Brucella suis 1330]
gi|384408577|ref|YP_005597198.1| single-strand binding protein [Brucella melitensis M28]
gi|384445163|ref|YP_005603882.1| single-strand binding protein [Brucella melitensis NI]
gi|37999436|sp|Q8G0J1.1|SSB_BRUSU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|23347929|gb|AAN30022.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|161335866|gb|ABX62171.1| single-strand binding protein [Brucella canis ATCC 23365]
gi|163674094|gb|ABY38205.1| single-strand binding protein [Brucella suis ATCC 23445]
gi|225617581|gb|EEH14626.1| single-strand binding protein [Brucella ceti str. Cudo]
gi|225640969|gb|ACO00883.1| single-strand binding protein [Brucella melitensis ATCC 23457]
gi|260155878|gb|EEW90958.1| single-stranded DNA-binding protein [Brucella suis bv. 4 str. 40]
gi|260915704|gb|EEX82565.1| helix-destabilizing protein [Brucella abortus bv. 3 str. Tulya]
gi|260920854|gb|EEX87507.1| single-stranded DNA-binding protein [Brucella ceti B1/94]
gi|260924539|gb|EEX91107.1| single-stranded DNA-binding protein [Brucella ceti M13/05/1]
gi|261294636|gb|EEX98132.1| single-stranded DNA-binding protein [Brucella ceti M644/93/1]
gi|261296961|gb|EEY00458.1| single-stranded DNA-binding protein [Brucella pinnipedialis B2/94]
gi|261301173|gb|EEY04670.1| single-stranded DNA-binding protein [Brucella neotomae 5K33]
gi|261303199|gb|EEY06696.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M163/99/10]
gi|261738278|gb|EEY26274.1| single-stranded DNA-binding protein [Brucella sp. F5/99]
gi|261742162|gb|EEY30088.1| single-stranded DNA-binding protein [Brucella suis bv. 5 str. 513]
gi|261744822|gb|EEY32748.1| single-stranded DNA-binding protein [Brucella suis bv. 3 str. 686]
gi|262766133|gb|EEZ11922.1| single-stranded DNA-binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|263094035|gb|EEZ17969.1| single-stranded DNA-binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|264660966|gb|EEZ31227.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M292/94/1]
gi|326409124|gb|ADZ66189.1| single-strand binding protein [Brucella melitensis M28]
gi|326538831|gb|ADZ87046.1| single-strand binding protein [Brucella melitensis M5-90]
gi|340559180|gb|AEK54418.1| single-stranded DNA-binding protein family [Brucella pinnipedialis
B2/94]
gi|343382948|gb|AEM18440.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|349743154|gb|AEQ08697.1| single-strand binding protein [Brucella melitensis NI]
gi|358258373|gb|AEU06108.1| single-stranded DNA-binding protein family [Brucella suis VBI22]
gi|363404851|gb|AEW15146.1| single-strand binding protein [Brucella canis HSK A52141]
Length = 168
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|49474367|ref|YP_032409.1| single-strand binding protein (ssb) [Bartonella quintana str.
Toulouse]
gi|403530655|ref|YP_006665184.1| single-strand binding protein (ssb) [Bartonella quintana RM-11]
gi|49239871|emb|CAF26269.1| Single-strand binding protein (ssb) [Bartonella quintana str.
Toulouse]
gi|403232726|gb|AFR26469.1| single-strand binding protein (ssb) [Bartonella quintana RM-11]
Length = 172
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R EI +++
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQK 106
>gi|339477740|ref|YP_004706560.1| single-strand DNA-binding protein [Candidatus Moranella endobia
PCIT]
gi|338172291|gb|AEI74692.1| single-strand DNA-binding protein [Candidatus Moranella endobia
PCIT]
Length = 186
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ+P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQNPEVRYMPNGGAVANITLATSDSWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV ++ +L V +++L GS +Y+EG L+ + + D +G R EI + +G + L
Sbjct: 57 RVVLFG-KLAEVAVEYLRKGSQVYIEGYLQTRKWQDQ-SGHDRYTTEIVVNIGSGTMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|395765218|ref|ZP_10445834.1| single-strand binding protein [Bartonella sp. DB5-6]
gi|395413071|gb|EJF79550.1| single-strand binding protein [Bartonella sp. DB5-6]
Length = 172
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL--- 198
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++ G L L
Sbjct: 59 IFNENLVKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQKYRGELQMLDGR 117
Query: 199 GKGGDAQPPSPSEVRGAGY 217
G G Q ++ G GY
Sbjct: 118 GAAGGEQMQGVNQTSG-GY 135
>gi|299146726|ref|ZP_07039794.1| single-stranded binding protein [Bacteroides sp. 3_1_23]
gi|298517217|gb|EFI41098.1| single-stranded binding protein [Bacteroides sp. 3_1_23]
Length = 183
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VGQ P K +G V F L T R +N T+ R +WH +
Sbjct: 29 KVILLGNVGQDPQVKYFDTGSAVATFRLAT-----TDRAYTLQNGTQVPERT--EWHNI- 80
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 81 VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIYV 126
>gi|347822710|ref|YP_004869756.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
gi|347662528|dbj|BAK85983.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
Length = 156
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGR-TVTLFSLGTGGIRNNRRPLENENPTEYANRCA 135
+ + +AI++G +G+ P + G + F + T +R E T
Sbjct: 1 MSQSVNRAIIIGHLGRDPDLAARREGEGKIASFGVATSETWTDRASGERREKT------- 53
Query: 136 VQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGR 194
QWHRV + + L V+ + G+ +YVEG+LE + + D G R + EI I R +G
Sbjct: 54 -QWHRVVSFNDHLSAVIERRCQKGTLVYVEGHLETRKWTDQ-QGQDRYVTEIIIDRFDGN 111
Query: 195 LVFLGKG 201
L L G
Sbjct: 112 LKVLANG 118
>gi|323496087|ref|ZP_08101147.1| single-stranded DNA-binding protein [Vibrio sinaloensis DSM 21326]
gi|323318831|gb|EGA71782.1| single-stranded DNA-binding protein [Vibrio sinaloensis DSM 21326]
Length = 179
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 13/133 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGSDPEVRYMPSGGAVANITIATSESWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV+++ +L V ++L GS +YVEG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRYTTEVVVQGFNGVMQML 114
Query: 199 GKGGDAQPPSPSE 211
GG AQ +P +
Sbjct: 115 --GGRAQGGAPGQ 125
>gi|375132137|ref|YP_004994237.1| single strand DNA-binding protein - SSB [Vibrio furnissii NCTC
11218]
gi|315181311|gb|ADT88225.1| single strand DNA-binding protein - SSB [Vibrio furnissii NCTC
11218]
Length = 177
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGSDPEVRYMPSGGAVANITVATSETWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV++Y +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVALYG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQGYNGTMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|256367561|ref|YP_003108118.1| single-strand binding protein [Escherichia coli]
gi|228480816|gb|ACQ42142.1| single-strand binding protein [Escherichia coli]
Length = 175
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 K 200
+
Sbjct: 114 R 114
>gi|187731172|ref|YP_001882751.1| single-stranded DNA-binding protein [Shigella boydii CDC 3083-94]
gi|187428164|gb|ACD07438.1| single-stranded DNA-binding protein [Shigella boydii CDC 3083-94]
Length = 171
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|21233694|ref|NP_639992.1| Single-strand DNA binding protein [Proteus vulgaris]
gi|21202878|dbj|BAB93594.1| Single-strand DNA binding protein [Proteus vulgaris]
Length = 154
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I+VG++GQ P + +G +V S+ T +++ E TE WH
Sbjct: 5 GVNKVIIVGKLGQDPEVHAMANGGSVANISVATSETWRDKQTGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR--RNGRLVF 197
RV V+ +L VV ++L GS IY+EG L + + D +G R E+ + G +
Sbjct: 57 RV-VFFGKLADVVGEYLRKGSQIYIEGQLSTRKWQDQ-SGADRYTTEVVVNPASGGTMQM 114
Query: 198 LG 199
LG
Sbjct: 115 LG 116
>gi|444308449|ref|ZP_21144094.1| single-strand binding protein [Ochrobactrum intermedium M86]
gi|443488032|gb|ELT50789.1| single-strand binding protein [Ochrobactrum intermedium M86]
Length = 171
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|296488185|tpg|DAA30298.1| TPA: single-stranded DNA-binding protein, mitochondrial precursor
[Bos taurus]
Length = 148
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENETYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|425183132|ref|ZP_18580804.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
gi|408093872|gb|EKH26920.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
Length = 178
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|359433155|ref|ZP_09223497.1| single-strand DNA-binding protein [Pseudoalteromonas sp. BSi20652]
gi|357920188|dbj|GAA59746.1| single-strand DNA-binding protein [Pseudoalteromonas sp. BSi20652]
Length = 240
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ + + TE WH
Sbjct: 4 GVNKVILVGNLGQDPEVRYMPNGNGVANITLATSDSYKDKNTGQMVDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V+ +L +V ++ GS IYVEG L+ + + D G + EI + G++ L
Sbjct: 56 RV-VFFGKLAEIVGEYCRKGSQIYVEGKLQTRKWTDQ-QGQEKYTTEIVVDGFTGQMQML 113
Query: 199 G-KGGDAQ 205
G +GGD Q
Sbjct: 114 GARGGDQQ 121
>gi|395782069|ref|ZP_10462477.1| single-stranded DNA-binding protein [Bartonella rattimassiliensis
15908]
gi|395419801|gb|EJF86091.1| single-stranded DNA-binding protein [Bartonella rattimassiliensis
15908]
Length = 168
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH V
Sbjct: 7 KVILIGNLGSDPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR--------NGR 194
++ E L + ++L GS IY+EG L+ + + D G R EI +++ +GR
Sbjct: 59 IFNENLVKIAEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLDGR 117
Query: 195 LVFLGKGGDAQPPSPS 210
G+ G +Q S S
Sbjct: 118 GTVGGEQGASQGGSYS 133
>gi|332531571|ref|ZP_08407468.1| single-strand-binding protein [Hylemonella gracilis ATCC 19624]
gi|332038934|gb|EGI75363.1| single-strand-binding protein [Hylemonella gracilis ATCC 19624]
Length = 184
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG G+ P + L SG V S+ T R +R E T QWHR
Sbjct: 4 VNKVILVGNCGRDPEIRYLPSGGAVANISIATTSRRKDRNSGEMVEET--------QWHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+ + ERL +V +++ G+ IYVEG L + + D
Sbjct: 56 VTFF-ERLAEIVGEYVKKGTPIYVEGRLTYRKYTD 89
>gi|163858084|ref|YP_001632382.1| single-strand binding protein [Bordetella petrii DSM 12804]
gi|163261812|emb|CAP44114.1| single-strand binding protein [Bordetella petrii]
Length = 159
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 11/128 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I++G +G+ P + G + S+ T ++ E TE WHR
Sbjct: 4 VNKVIIIGNLGRDPEIRYSADGVGICTISVATSTNWKDKATGEKREETE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
+ V+ RL + ++L GS +Y+EG L+ + + D TG R EI + L G+
Sbjct: 56 I-VFYNRLAEIAGEYLRQGSAVYIEGRLKTRKWQDKETGADRYSTEIVAEQMQMLG--GR 112
Query: 201 GGDAQPPS 208
G D Q PS
Sbjct: 113 GADGQAPS 120
>gi|422830189|ref|ZP_16878349.1| single-stranded DNA-binding protein [Escherichia coli B093]
gi|371606067|gb|EHN94668.1| single-stranded DNA-binding protein [Escherichia coli B093]
Length = 162
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPDIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS IY+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQIYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|261254001|ref|ZP_05946574.1| single-stranded DNA-binding protein [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417955179|ref|ZP_12598201.1| single-stranded DNA-binding protein [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260937392|gb|EEX93381.1| single-stranded DNA-binding protein [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342813632|gb|EGU48595.1| single-stranded DNA-binding protein [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 178
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGSDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV+++ +L V ++L GS +YVEG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRYTTEVVVQGFNGVMQML 114
Query: 199 GKGGDAQPPSPS 210
GG AQ +P+
Sbjct: 115 --GGRAQGGAPA 124
>gi|217971793|ref|YP_002356544.1| ssDNA-binding protein [Shewanella baltica OS223]
gi|217496928|gb|ACK45121.1| single-strand binding protein [Shewanella baltica OS223]
Length = 236
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V ++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ I ++G + L
Sbjct: 56 RVVLFG-KLAEITGEYLRKGSQVYLEGKLQTRKWKDQ-SGQDRYSTEVVIDQSGSMQMLG 113
Query: 199 --GKGGDAQ 205
G+GG AQ
Sbjct: 114 SRGQGGQAQ 122
>gi|39935881|ref|NP_948157.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
CGA009]
gi|192291528|ref|YP_001992133.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
TIE-1]
gi|39649735|emb|CAE28256.1| single-strand DNA-binding protein [Rhodopseudomonas palustris
CGA009]
gi|192285277|gb|ACF01658.1| single-strand binding protein [Rhodopseudomonas palustris TIE-1]
Length = 167
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSESWRDRATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L V ++L G+ +Y+EG L+ + + D +G R E+ ++ N L L
Sbjct: 57 VVIFNEGLCKVAEQYLRKGAKVYIEGQLQTRKWTDQ-SGAERYSTEVVLQNFNSNLTML 114
>gi|359453422|ref|ZP_09242739.1| single-strand DNA-binding protein [Pseudoalteromonas sp. BSi20495]
gi|414072450|ref|ZP_11408391.1| single-strand DNA-binding protein [Pseudoalteromonas sp. Bsw20308]
gi|358049531|dbj|GAA78988.1| single-strand DNA-binding protein [Pseudoalteromonas sp. BSi20495]
gi|410805135|gb|EKS11160.1| single-strand DNA-binding protein [Pseudoalteromonas sp. Bsw20308]
Length = 241
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ + + TE WH
Sbjct: 4 GVNKVILVGNLGQDPEVRYMPNGNGVANITLATSDSYKDKNTGQMVDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V+ +L +V ++ GS IYVEG L+ + + D G + EI + G++ L
Sbjct: 56 RV-VFFGKLAEIVGEYCRKGSQIYVEGKLQTRKWTDQ-QGQEKYTTEIVVDGFTGQMQML 113
Query: 199 G-KGGDAQ 205
G +GGD Q
Sbjct: 114 GARGGDQQ 121
>gi|345870024|ref|ZP_08821979.1| single-strand binding protein [Thiorhodococcus drewsii AZ1]
gi|343922411|gb|EGV33113.1| single-strand binding protein [Thiorhodococcus drewsii AZ1]
Length = 167
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + + SG V + T +R E + TE WH
Sbjct: 3 GINKVILIGNLGADPEVRYMPSGDAVANVRIATSETWKDRNTGERQERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
V V+ ++ +V ++L GS IYVEG L + + G R E+ + NG + L
Sbjct: 55 NV-VFFGKVAEIVKQYLRKGSKIYVEGKLRTRKWQGQ-DGQDRYSTEVVVDMNGTMQMLD 112
Query: 199 ---GKGGDAQPPSPSE 211
G GG + P P E
Sbjct: 113 GRQGMGGGSAAPYPEE 128
>gi|422367295|ref|ZP_16447750.1| single-strand binding family protein, partial [Escherichia coli MS
153-1]
gi|315290015|gb|EFU49401.1| single-strand binding family protein [Escherichia coli MS 153-1]
Length = 179
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E + TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
>gi|256369529|ref|YP_003107039.1| single-stranded DNA-binding protein family [Brucella microti CCM
4915]
gi|255999691|gb|ACU48090.1| single-stranded DNA-binding protein family [Brucella microti CCM
4915]
Length = 168
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|329295496|ref|ZP_08252832.1| single-stranded DNA-binding protein [Plautia stali symbiont]
Length = 178
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + + V SL T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYIPNSSAVATLSLATSESWRDKQSGEQKEVTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG+L + + D G + E+ + G + LG
Sbjct: 57 RVVIFG-KLAEIAGEYLRKGSQVYIEGHLRTRKWTDQ-AGQEKYTTEVVVNIGGTMQMLG 114
>gi|194435945|ref|ZP_03068048.1| single-strand binding protein [Escherichia coli 101-1]
gi|251786914|ref|YP_003001218.1| ybl164 [Escherichia coli BL21(DE3)]
gi|253771493|ref|YP_003034324.1| single-strand binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163593|ref|YP_003046701.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Escherichia coli B str. REL606]
gi|254290343|ref|YP_003056091.1| ssDNA-binding protein [Escherichia coli BL21(DE3)]
gi|297519714|ref|ZP_06938100.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Escherichia coli OP50]
gi|300928470|ref|ZP_07143998.1| single-strand binding family protein [Escherichia coli MS 187-1]
gi|422788511|ref|ZP_16841247.1| single-strand binding protein [Escherichia coli H489]
gi|422792255|ref|ZP_16844956.1| single-strand binding protein [Escherichia coli TA007]
gi|442598523|ref|ZP_21016285.1| Single-stranded DNA-binding protein [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|194425488|gb|EDX41472.1| single-strand binding protein [Escherichia coli 101-1]
gi|242379187|emb|CAQ33990.1| ybl164 [Escherichia coli BL21(DE3)]
gi|253322537|gb|ACT27139.1| single-strand binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975494|gb|ACT41165.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Escherichia coli B str. REL606]
gi|253979650|gb|ACT45320.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Escherichia coli BL21(DE3)]
gi|300463536|gb|EFK27029.1| single-strand binding family protein [Escherichia coli MS 187-1]
gi|323959828|gb|EGB55477.1| single-strand binding protein [Escherichia coli H489]
gi|323971121|gb|EGB66367.1| single-strand binding protein [Escherichia coli TA007]
gi|441652814|emb|CCQ01884.1| Single-stranded DNA-binding protein [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 161
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + + +G V +L T +++ E TE WH
Sbjct: 5 GINKVILIGYLGQDPDIRYMPNGGAVASIALATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y++G L + + D TG R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGAQVYIDGQLRTRKWTDQ-TGQERYTTEVVVHTGGTMQMLG 114
>gi|395779791|ref|ZP_10460260.1| single-strand binding protein [Bartonella washoensis 085-0475]
gi|395420166|gb|EJF86451.1| single-strand binding protein [Bartonella washoensis 085-0475]
Length = 172
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHSIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
++ E L VV ++L GS IY+EG L+ + + D G R E+ +++
Sbjct: 59 IFNENLIKVVEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQK 106
>gi|349702378|ref|ZP_08904007.1| single-strand DNA-binding protein Ssb [Gluconacetobacter europaeus
LMG 18494]
Length = 156
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 11/127 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGR-TVTLFSLGTGGIRNNRRPLENENPTEYANRCA 135
+ + +AI++G +G+ P + G + F + T +R E T
Sbjct: 1 MSQSVNRAIIIGHLGRDPDLAARREGEGKIASFGVATSETWTDRASGERREKT------- 53
Query: 136 VQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGR 194
QWHRV + + L V+ + G+ +YVEG+LE + + D G R + EI I R +G
Sbjct: 54 -QWHRVVSFNDHLSAVIERRCQKGTLVYVEGHLETRKWTDQ-QGQDRYVTEIIIDRFDGN 111
Query: 195 LVFLGKG 201
L L G
Sbjct: 112 LKVLANG 118
>gi|422378457|ref|ZP_16458669.1| single-strand binding family protein [Escherichia coli MS 60-1]
gi|324010281|gb|EGB79500.1| single-strand binding family protein [Escherichia coli MS 60-1]
Length = 175
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|121606707|ref|YP_984036.1| ssDNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120595676|gb|ABM39115.1| single-strand binding protein [Polaromonas naphthalenivorans CJ2]
Length = 175
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K I+VG +G+ P + SG V ++ T +++ E + TE WHR
Sbjct: 4 VNKVIIVGNLGKDPEMRSFPSGDQVANVTIATTDKWKDKQSGEMKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
V V+ RL +V ++L GS +YVEG+L + + D +G+ + EI R ++ LG
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTDQ-SGVEKYTTEI---RADQMQMLGS 110
Query: 201 GGDAQPPSPSEVRGAGY 217
P+ G GY
Sbjct: 111 RQGMGGPAAGHDEGGGY 127
>gi|425291916|ref|ZP_18682586.1| single-stranded DNA-binding protein [Escherichia coli 3006]
gi|408203824|gb|EKI28831.1| single-stranded DNA-binding protein [Escherichia coli 3006]
Length = 175
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|410609902|ref|YP_006954109.1| Single-stranded DNA-binding protein [Escherichia coli]
gi|389596098|gb|AFK88866.1| Single-stranded DNA-binding protein [Escherichia coli]
Length = 173
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|419145642|ref|ZP_13690355.1| single-stranded DNA-binding protein [Escherichia coli DEC6A]
gi|377986125|gb|EHV49326.1| single-stranded DNA-binding protein [Escherichia coli DEC6A]
Length = 162
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G +V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGSVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|265984164|ref|ZP_06096899.1| single-stranded DNA-binding protein [Brucella sp. 83/13]
gi|306838161|ref|ZP_07471017.1| single-strand binding protein [Brucella sp. NF 2653]
gi|264662756|gb|EEZ33017.1| single-stranded DNA-binding protein [Brucella sp. 83/13]
gi|306406751|gb|EFM62974.1| single-strand binding protein [Brucella sp. NF 2653]
Length = 169
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKIAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|194440094|ref|ZP_03072148.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
gi|194420979|gb|EDX37012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
Length = 175
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|254780183|ref|YP_003064596.1| single-strand binding protein (ssb) [Candidatus Liberibacter
asiaticus str. psy62]
gi|254039860|gb|ACT56656.1| single-strand binding protein (ssb) [Candidatus Liberibacter
asiaticus str. psy62]
Length = 159
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P + + GR + + T +R E TE WH V
Sbjct: 7 KVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTE--------WHSVI 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+ E L +V ++L GS +Y+EG+L+ + + D +G R EI +R
Sbjct: 59 VFSEELCRIVEQYLRKGSKVYIEGSLQTRKWQDQ-SGNNRYTTEIIMR 105
>gi|38640325|ref|NP_944246.1| Bcep22gp17 [Burkholderia phage Bcep22]
gi|33860392|gb|AAQ54952.1| putative single strand DNA-binding protein [Burkholderia phage
Bcep22]
Length = 169
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P + L SG V L T ++ + + TE WHR
Sbjct: 4 VNKVILVGNLGADPEVRYLPSGDAVANIRLATTDRYKDKASGDIKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
VS + RL +V +HL G+++Y+EG ++ + + D +G R EI R+ LGK
Sbjct: 56 VSFFG-RLAEIVDEHLRKGASVYIEGRIKTRKWQDQ-SGQDRYTTEIVA---DRMQMLGK 110
Query: 201 GGDAQPPS 208
G ++ S
Sbjct: 111 PGGSRDDS 118
>gi|336312899|ref|ZP_08567844.1| single-stranded DNA-binding protein [Shewanella sp. HN-41]
gi|335863511|gb|EGM68655.1| single-stranded DNA-binding protein [Shewanella sp. HN-41]
Length = 236
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V ++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ I ++G + L
Sbjct: 56 RVVLFG-KLAEITGEYLRKGSQVYLEGKLQTRKWKDQ-SGQDRYSTEVVIDQSGSMQMLG 113
Query: 199 --GKGGDAQ 205
G+GG AQ
Sbjct: 114 SRGQGGQAQ 122
>gi|148255735|ref|YP_001240320.1| single-stranded DNA-binding protein [Bradyrhizobium sp. BTAi1]
gi|146407908|gb|ABQ36414.1| single-strand binding protein [Bradyrhizobium sp. BTAi1]
Length = 166
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKGTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L G+ +Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|421495356|ref|ZP_15942643.1| ssb [Aeromonas media WS]
gi|407185671|gb|EKE59441.1| ssb [Aeromonas media WS]
Length = 155
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 20/147 (13%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +GQ P + G + SL T +++ E + TE WH
Sbjct: 3 GINKVILIGNLGQDPEIRYTSGGMAIATLSLATSESWRDKQTGEQKERTE--------WH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V +L V ++L GS +YVEG L+ + + D +G R E+ + G L L
Sbjct: 55 RV-VLVGKLAEVAGQYLKKGSQVYVEGKLQTRKWQDQ-SGQDRYTTEVQVDSFTGVLQML 112
Query: 199 G--------KGGDAQPPS-PSEVRGAG 216
G + +QPP+ P+ AG
Sbjct: 113 GGKPQQGSSQKAQSQPPARPAATPSAG 139
>gi|392534010|ref|ZP_10281147.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Pseudoalteromonas arctica A 37-1-2]
Length = 241
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ + + TE WH
Sbjct: 4 GVNKVILVGNLGQDPEVRYMPNGNGVANITLATSDSYKDKNTGQMVDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V+ +L +V ++ GS IYVEG L+ + + D G + EI + G++ L
Sbjct: 56 RV-VFFGKLAEIVGEYCRKGSQIYVEGKLQTRKWTDQ-QGQEKYTTEIVVDGFTGQMQML 113
Query: 199 G-KGGDAQ 205
G +GGD Q
Sbjct: 114 GARGGDQQ 121
>gi|417259965|ref|ZP_12047486.1| plasmid-derived single-stranded DNA-binding protein, partial
[Escherichia coli 2.3916]
gi|386226413|gb|EII48717.1| plasmid-derived single-stranded DNA-binding protein, partial
[Escherichia coli 2.3916]
Length = 134
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|417516196|ref|ZP_12179138.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353654808|gb|EHC95996.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 168
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G+VGQ P + SG ++ T +++ E + TE WH
Sbjct: 5 GVNKVIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV+V +L VV +++ G +Y EG L + + D TG R EI + NG + LG
Sbjct: 57 RVAVVG-KLAEVVGQYVKKGDQVYFEGMLRTRKWQDQ-TGQDRYTTEINVGINGVMQMLG 114
Query: 200 KGGD 203
GD
Sbjct: 115 GTGD 118
>gi|348590764|ref|YP_004875226.1| single-stranded DNA-binding protein [Taylorella asinigenitalis
MCE3]
gi|347974668|gb|AEP37203.1| Single-stranded DNA-binding protein [Taylorella asinigenitalis
MCE3]
Length = 167
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G++G P + + R VT SLGT + N+R E TE WHR
Sbjct: 3 VNKVILIGRLGNDPDVRTGQDNRVVTRISLGTNLVWNDRNTGERREETE--------WHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ R V +L G+ +YVEG L+ + D
Sbjct: 55 V-VFFGRTAEVARDYLKKGAQVYVEGRLKTNKYQD 88
>gi|312883207|ref|ZP_07742936.1| single-stranded DNA-binding protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369130|gb|EFP96653.1| single-stranded DNA-binding protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 174
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P + + +G V +L T ++ E TE WH
Sbjct: 5 GINKVILVGNLGSDPEVRYMPNGGAVANITLATSESWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
RV+++ +L V ++L GS +YVEG L+ + + D G R E+ ++ +G + L
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRYTTEVVVQGYSGVMQML 114
Query: 199 GKGGDAQPPSPS 210
G A P+P+
Sbjct: 115 GGRNQAGSPTPN 126
>gi|299133977|ref|ZP_07027171.1| single-strand binding protein [Afipia sp. 1NLS2]
gi|298591813|gb|EFI52014.1| single-strand binding protein [Afipia sp. 1NLS2]
Length = 160
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGADPDIRRTQDGRPIANLSIATSETWRDKNTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|209694058|ref|YP_002261986.1| single-stranded DNA-binding protein [Aliivibrio salmonicida
LFI1238]
gi|208008009|emb|CAQ78146.1| single-stranded DNA-binding protein [Aliivibrio salmonicida
LFI1238]
Length = 183
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + + SG V ++ T ++ E TE WH
Sbjct: 5 GINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV+++ +L V ++L GS +YVEG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRFTTEVVVQGFNGVMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|17987163|ref|NP_539797.1| single-strand binding protein [Brucella melitensis bv. 1 str. 16M]
gi|260565636|ref|ZP_05836120.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|265991184|ref|ZP_06103741.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|37999451|sp|Q8YHC2.1|SSB_BRUME RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|17982830|gb|AAL52061.1| single-strand binding protein [Brucella melitensis bv. 1 str. 16M]
gi|260151704|gb|EEW86798.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|263001968|gb|EEZ14543.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 168
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|407893144|ref|ZP_11152174.1| single-strand DNA binding protein [Diplorickettsia massiliensis
20B]
Length = 141
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G P + +G V ++ TG +++ E + TE WH
Sbjct: 4 GINKVILIGHLGADPEVCSMPNGTAVATINVATGETWKDKQTGEKQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ +RL +V L GS +Y+EG L+ + + D
Sbjct: 56 RV-VFFQRLAEIVRDFLKKGSQVYIEGRLQTRKWQD 90
>gi|209964376|ref|YP_002297291.1| ssDNA-binding protein [Rhodospirillum centenum SW]
gi|209957842|gb|ACI98478.1| single-strand DNA binding protein, putative [Rhodospirillum
centenum SW]
Length = 188
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + +++G V + T +R E + T QWH
Sbjct: 5 VNKVILIGNLGKDPEIRNMQNGGKVCNLRIATSENWKDRNTGERQERT--------QWHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L + ++L GS +Y+EG LE + + D +G + E+ +R+ G L L
Sbjct: 57 VVIFNENLAQIAERYLRKGSKVYIEGQLETRKWTDQ-SGQEKYTTEVVLRQFRGELTLL 114
>gi|15837993|ref|NP_298681.1| single-stranded DNA-binding protein [Xylella fastidiosa 9a5c]
gi|71274822|ref|ZP_00651110.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|170729933|ref|YP_001775366.1| single-stranded DNA-binding protein [Xylella fastidiosa M12]
gi|37999801|sp|Q9PDI7.1|SSB2_XYLFA RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2;
AltName: Full=Helix-destabilizing protein 2
gi|9106400|gb|AAF84201.1|AE003970_8 single-stranded DNA binding protein [Xylella fastidiosa 9a5c]
gi|71164554|gb|EAO14268.1| Single-strand binding protein [Xylella fastidiosa Dixon]
gi|71727795|gb|EAO30051.1| Single-strand binding protein [Xylella fastidiosa Ann-1]
gi|167964726|gb|ACA11736.1| single-stranded DNA binding protein [Xylella fastidiosa M12]
Length = 164
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G T+T SL T +R ++ E +WH
Sbjct: 4 GINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN 174
RV + +LG + ++L GS Y+EG++ F
Sbjct: 55 RVKFFG-KLGEIAGEYLRKGSQCYIEGSIRYDKFT 88
>gi|332532317|ref|ZP_08408197.1| single-stranded DNA-binding protein [Pseudoalteromonas haloplanktis
ANT/505]
gi|332038184|gb|EGI74630.1| single-stranded DNA-binding protein [Pseudoalteromonas haloplanktis
ANT/505]
Length = 240
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ + + TE WH
Sbjct: 4 GVNKVILVGNLGQDPEVRYMPNGNGVANITLATSDSYKDKNTGQMVDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V+ +L +V ++ GS IYVEG L+ + + D G + EI + G++ L
Sbjct: 56 RV-VFFGKLAEIVGEYCRKGSQIYVEGKLQTRKWTDQ-QGQEKYTTEIVVDGFTGQMQML 113
Query: 199 G-KGGDAQ 205
G +GGD Q
Sbjct: 114 GARGGDQQ 121
>gi|429913076|ref|ZP_19379029.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9941]
gi|432517018|ref|ZP_19754224.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE224]
gi|432702039|ref|ZP_19937176.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE169]
gi|433147325|ref|ZP_20332416.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE168]
gi|429452618|gb|EKZ88499.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9941]
gi|431035303|gb|ELD46694.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE224]
gi|431238447|gb|ELF33362.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE169]
gi|431653040|gb|ELJ20156.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE168]
Length = 175
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEVREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|421680579|ref|ZP_16120428.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri 1485-80]
gi|404342447|gb|EJZ68830.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri 1485-80]
Length = 175
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|365857508|ref|ZP_09397497.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
gi|363715937|gb|EHL99354.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
Length = 160
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K L+G +G+ P + ++G V + T +R E +WH
Sbjct: 4 VNKVTLIGNLGRDPEVRSFQNGGRVVNLRIATTETYKDREGNRQEK---------TEWHS 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNG-RLVFL- 198
V+++ E+LG + K L GS +Y+EG LE + + D G R EI +R G LV L
Sbjct: 55 VAIFNEKLGEIAEKCLRKGSKVYLEGKLETRKWTDQ-QGQERYSTEIVLRPFGSELVLLD 113
Query: 199 --GKGG-DAQPPSPS 210
G+GG D Q PS
Sbjct: 114 GKGQGGADDQSGRPS 128
>gi|301772620|ref|XP_002921721.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 2 [Ailuropoda melanoleuca]
gi|301772622|ref|XP_002921722.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 3 [Ailuropoda melanoleuca]
gi|301772624|ref|XP_002921723.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 4 [Ailuropoda melanoleuca]
Length = 148
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENEAYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|416533085|ref|ZP_11746094.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363569038|gb|EHL53004.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
Length = 153
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K I++G+VGQ P + SG ++ T +++ E + TE WH
Sbjct: 5 GVNKVIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV+V +L VV +++ G +Y EG L + + D TG R EI + NG + LG
Sbjct: 57 RVAVVG-KLAEVVGQYVKKGDQVYFEGMLRTRKWQDQ-TGQDRYTTEINVGINGVMQMLG 114
Query: 200 KGGD 203
GD
Sbjct: 115 GTGD 118
>gi|191169627|ref|ZP_03031337.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B7A]
gi|419183940|ref|ZP_13727510.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|419189539|ref|ZP_13733034.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|190900334|gb|EDV60173.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B7A]
gi|378019963|gb|EHV82743.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|378022067|gb|EHV84756.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
Length = 175
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLHKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|375258466|ref|YP_005017636.1| single-stranded DNA-binding protein [Klebsiella oxytoca KCTC 1686]
gi|397655411|ref|YP_006496113.1| ssDNA-binding protein [Klebsiella oxytoca E718]
gi|402844291|ref|ZP_10892657.1| single-stranded DNA-binding protein [Klebsiella sp. OBRC7]
gi|421727627|ref|ZP_16166787.1| single-stranded DNA-binding protein [Klebsiella oxytoca M5al]
gi|423105952|ref|ZP_17093653.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5242]
gi|423112034|ref|ZP_17099728.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5243]
gi|423117450|ref|ZP_17105141.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5245]
gi|365907944|gb|AEX03397.1| single-stranded DNA-binding protein [Klebsiella oxytoca KCTC 1686]
gi|376375359|gb|EHS88151.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5243]
gi|376375580|gb|EHS88366.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5245]
gi|376379260|gb|EHS92014.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5242]
gi|394344124|gb|AFN30245.1| Single-stranded DNA-binding protein [Klebsiella oxytoca E718]
gi|402275050|gb|EJU24213.1| single-stranded DNA-binding protein [Klebsiella sp. OBRC7]
gi|410371596|gb|EKP26317.1| single-stranded DNA-binding protein [Klebsiella oxytoca M5al]
Length = 175
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQMLG 114
>gi|110679808|ref|YP_682815.1| single-strand binding protein [Roseobacter denitrificans OCh 114]
gi|109455924|gb|ABG32129.1| single-strand binding protein [Roseobacter denitrificans OCh 114]
Length = 166
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERKERTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARVAEQYLRKGSKVYLEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|73853254|ref|YP_308750.1| single-stranded DNA-binding protein [Escherichia coli]
gi|417265460|ref|ZP_12052831.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.3884]
gi|73476838|gb|AAZ76453.1| Single-stranded DNA binding protein [Escherichia coli]
gi|386232513|gb|EII59858.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.3884]
Length = 177
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I+VG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVIVVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|423712746|ref|ZP_17687046.1| single-strand binding protein [Bartonella washoensis Sb944nv]
gi|395410997|gb|EJF77534.1| single-strand binding protein [Bartonella washoensis Sb944nv]
Length = 146
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K +L+G +G +P K + SG V F + T ++ + + TE WH V
Sbjct: 4 KVMLIGFLGANPESKTMPSGGEVVNFRMATSESYTDKATNQKVDKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ L V +++L GS +Y+EG L+ + + D G R I EI + + G L L K
Sbjct: 56 IFNPHLAKVALQYLNKGSKVYIEGQLQTRKWQDK-NGHDRYITEIVLTKYKGDLKLLDSK 114
Query: 201 GGDAQPPS 208
D Q S
Sbjct: 115 NDDNQEQS 122
>gi|432762563|ref|ZP_19997025.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE48]
gi|431315437|gb|ELG03349.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE48]
Length = 175
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILIGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|153009529|ref|YP_001370744.1| ssDNA-binding protein [Ochrobactrum anthropi ATCC 49188]
gi|151561417|gb|ABS14915.1| single-strand binding protein [Ochrobactrum anthropi ATCC 49188]
Length = 172
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++L SG V + T +R+ E ++ TE WH
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQSGERKDRTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNENLAKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|71732476|gb|EAO34529.1| Single-strand binding protein [Xylella fastidiosa subsp. sandyi
Ann-1]
Length = 164
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G T+T SL T +R ++ E +WH
Sbjct: 4 GINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN 174
RV + +LG + ++L GS Y+EG++ F
Sbjct: 55 RVKFFG-KLGEIAGEYLRKGSQCYIEGSIRYDKFT 88
>gi|147870|gb|AAA24649.1| single-strand DNA-binding protein (ssb) [Escherichia coli]
Length = 178
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 12/127 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 114
Query: 200 --KGGDA 204
+GG A
Sbjct: 115 GRQGGGA 121
>gi|220935461|ref|YP_002514360.1| single-strand binding protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219996771|gb|ACL73373.1| single-strand binding protein [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 155
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P K + SG V SL T ++ E + TE WH
Sbjct: 4 GVNKVILVGNLGNDPEVKYMPSGNAVANVSLATTESWKDKNSGERQEKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV+ Y +L + ++L GS IYVEG L+ + +
Sbjct: 56 RVTFYG-KLAEIAGEYLKKGSQIYVEGRLQTRKW 88
>gi|114570434|ref|YP_757114.1| single-strand binding protein [Maricaulis maris MCS10]
gi|114340896|gb|ABI66176.1| single-strand binding protein [Maricaulis maris MCS10]
Length = 164
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P +++ +G V S+ T ++ E TE WHR
Sbjct: 5 VNKVILVGNLGRDPEIRRMNNGDPVVNLSVATSESWRDKSSGERREKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ + L V +L GS +YVEG L+ + + D G + E+ ++R G L L
Sbjct: 57 VVIFNDNLAKVAENYLKKGSKVYVEGQLQTRKWTDQ-NGQEKYSTEVVLQRFRGELTML 114
>gi|431805729|ref|YP_007232630.1| ssDNA-binding protein [Liberibacter crescens BT-1]
gi|430799704|gb|AGA64375.1| Single-stranded DNA-binding protein [Liberibacter crescens BT-1]
Length = 168
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I++G +G P ++ + GR + + T +R E TE WH
Sbjct: 5 INKVIIIGNLGADPEIRRTQDGRMIVSIRIATSETWRDRNTNERREKTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFLG 199
V ++ E L + ++L GS +Y+EG L+ + + D G R EI ++ N L L
Sbjct: 57 VVIFNEGLCKIAEQYLTKGSKVYIEGQLQTRKWKDQ-NGNDRYTTEIVLQGFNSTLTMLD 115
Query: 200 KGGDAQPPSPSEVRGAGYF 218
G+ + + R +GY
Sbjct: 116 TRGENNNFNKN--RSSGYM 132
>gi|420544111|ref|ZP_15042386.1| single-stranded DNA-binding protein [Yersinia pestis PY-01]
gi|420549497|ref|ZP_15047203.1| single-stranded DNA-binding protein [Yersinia pestis PY-02]
gi|420554885|ref|ZP_15052008.1| single-stranded DNA-binding protein [Yersinia pestis PY-03]
gi|420560513|ref|ZP_15056879.1| single-stranded DNA-binding protein [Yersinia pestis PY-04]
gi|420570953|ref|ZP_15066343.1| single-stranded DNA-binding protein [Yersinia pestis PY-05]
gi|420571101|ref|ZP_15066471.1| single-stranded DNA-binding protein [Yersinia pestis PY-06]
gi|420576610|ref|ZP_15071449.1| single-stranded DNA-binding protein [Yersinia pestis PY-07]
gi|420581832|ref|ZP_15076206.1| single-stranded DNA-binding protein [Yersinia pestis PY-08]
gi|420592303|ref|ZP_15085649.1| single-stranded DNA-binding protein [Yersinia pestis PY-09]
gi|420597709|ref|ZP_15090506.1| single-stranded DNA-binding protein [Yersinia pestis PY-10]
gi|420597863|ref|ZP_15090643.1| single-stranded DNA-binding protein [Yersinia pestis PY-11]
gi|420603352|ref|ZP_15095512.1| single-stranded DNA-binding protein [Yersinia pestis PY-12]
gi|420608750|ref|ZP_15100413.1| single-stranded DNA-binding protein [Yersinia pestis PY-13]
gi|420614230|ref|ZP_15105321.1| single-stranded DNA-binding family protein [Yersinia pestis PY-14]
gi|420619605|ref|ZP_15109990.1| single-stranded DNA-binding protein [Yersinia pestis PY-15]
gi|420629910|ref|ZP_15119332.1| single-stranded DNA-binding protein [Yersinia pestis PY-16]
gi|420634968|ref|ZP_15123856.1| single-stranded DNA-binding protein [Yersinia pestis PY-19]
gi|420640263|ref|ZP_15128629.1| single-stranded DNA-binding protein [Yersinia pestis PY-25]
gi|420640456|ref|ZP_15128803.1| single-stranded DNA-binding protein [Yersinia pestis PY-29]
gi|420651153|ref|ZP_15138506.1| single-stranded DNA-binding protein [Yersinia pestis PY-32]
gi|420651456|ref|ZP_15138775.1| single-stranded DNA-binding protein [Yersinia pestis PY-34]
gi|420656630|ref|ZP_15143449.1| single-stranded DNA-binding protein [Yersinia pestis PY-36]
gi|420662017|ref|ZP_15148252.1| single-stranded DNA-binding protein [Yersinia pestis PY-42]
gi|420672312|ref|ZP_15157581.1| single-stranded DNA-binding family protein [Yersinia pestis PY-45]
gi|420677652|ref|ZP_15162451.1| single-stranded DNA-binding protein [Yersinia pestis PY-46]
gi|420677869|ref|ZP_15162645.1| single-stranded DNA-binding protein [Yersinia pestis PY-47]
gi|420683300|ref|ZP_15167523.1| single-stranded DNA-binding protein [Yersinia pestis PY-48]
gi|420693947|ref|ZP_15176921.1| single-stranded DNA-binding protein [Yersinia pestis PY-52]
gi|420694279|ref|ZP_15177209.1| single-stranded DNA-binding protein [Yersinia pestis PY-53]
gi|420705523|ref|ZP_15186527.1| single-stranded DNA-binding family protein [Yersinia pestis PY-54]
gi|420710745|ref|ZP_15191275.1| single-stranded DNA-binding protein [Yersinia pestis PY-55]
gi|420716322|ref|ZP_15196213.1| single-stranded DNA-binding protein [Yersinia pestis PY-56]
gi|420721936|ref|ZP_15200987.1| single-stranded DNA-binding protein [Yersinia pestis PY-58]
gi|420727368|ref|ZP_15205813.1| single-stranded DNA-binding protein [Yersinia pestis PY-59]
gi|420727476|ref|ZP_15205908.1| single-stranded DNA-binding protein [Yersinia pestis PY-60]
gi|420737727|ref|ZP_15215154.1| single-stranded DNA-binding protein [Yersinia pestis PY-61]
gi|420738000|ref|ZP_15215395.1| single-stranded DNA-binding protein [Yersinia pestis PY-63]
gi|420749100|ref|ZP_15225003.1| single-stranded DNA-binding protein [Yersinia pestis PY-65]
gi|420760557|ref|ZP_15234653.1| single-stranded DNA-binding protein [Yersinia pestis PY-66]
gi|420765563|ref|ZP_15239185.1| single-stranded DNA-binding protein [Yersinia pestis PY-71]
gi|420770704|ref|ZP_15243784.1| single-stranded DNA-binding protein [Yersinia pestis PY-72]
gi|420775684|ref|ZP_15248304.1| single-stranded DNA-binding protein [Yersinia pestis PY-76]
gi|420776057|ref|ZP_15248624.1| single-stranded DNA-binding protein [Yersinia pestis PY-88]
gi|420781367|ref|ZP_15253280.1| single-stranded DNA-binding protein [Yersinia pestis PY-89]
gi|420791949|ref|ZP_15262679.1| single-stranded DNA-binding family protein [Yersinia pestis PY-90]
gi|420792171|ref|ZP_15262876.1| single-stranded DNA-binding protein [Yersinia pestis PY-91]
gi|420802730|ref|ZP_15272363.1| single-stranded DNA-binding protein [Yersinia pestis PY-92]
gi|420807930|ref|ZP_15277086.1| single-stranded DNA-binding protein [Yersinia pestis PY-93]
gi|420813397|ref|ZP_15281964.1| single-stranded DNA-binding family protein [Yersinia pestis PY-94]
gi|420813757|ref|ZP_15282284.1| single-stranded DNA-binding protein [Yersinia pestis PY-95]
gi|420818794|ref|ZP_15286877.1| single-stranded DNA-binding protein [Yersinia pestis PY-96]
gi|420829539|ref|ZP_15296523.1| single-stranded DNA-binding protein [Yersinia pestis PY-98]
gi|420829720|ref|ZP_15296677.1| single-stranded DNA-binding protein [Yersinia pestis PY-99]
gi|420839883|ref|ZP_15305868.1| single-stranded DNA-binding protein [Yersinia pestis PY-100]
gi|420845367|ref|ZP_15310826.1| single-stranded DNA-binding protein [Yersinia pestis PY-102]
gi|420850706|ref|ZP_15315626.1| single-stranded DNA-binding protein [Yersinia pestis PY-103]
gi|420861598|ref|ZP_15325005.1| single-stranded DNA-binding protein [Yersinia pestis PY-113]
gi|391434836|gb|EIQ95980.1| single-stranded DNA-binding protein [Yersinia pestis PY-01]
gi|391435231|gb|EIQ96307.1| single-stranded DNA-binding protein [Yersinia pestis PY-02]
gi|391436080|gb|EIQ97067.1| single-stranded DNA-binding protein [Yersinia pestis PY-05]
gi|391439223|gb|EIQ99901.1| single-stranded DNA-binding protein [Yersinia pestis PY-03]
gi|391450791|gb|EIR10386.1| single-stranded DNA-binding protein [Yersinia pestis PY-04]
gi|391453076|gb|EIR12423.1| single-stranded DNA-binding protein [Yersinia pestis PY-06]
gi|391453969|gb|EIR13226.1| single-stranded DNA-binding protein [Yersinia pestis PY-09]
gi|391466528|gb|EIR24588.1| single-stranded DNA-binding protein [Yersinia pestis PY-07]
gi|391467724|gb|EIR25675.1| single-stranded DNA-binding protein [Yersinia pestis PY-10]
gi|391468354|gb|EIR26237.1| single-stranded DNA-binding protein [Yersinia pestis PY-08]
gi|391485165|gb|EIR41341.1| single-stranded DNA-binding protein [Yersinia pestis PY-12]
gi|391485405|gb|EIR41550.1| single-stranded DNA-binding protein [Yersinia pestis PY-11]
gi|391499197|gb|EIR53847.1| single-stranded DNA-binding protein [Yersinia pestis PY-13]
gi|391499429|gb|EIR54048.1| single-stranded DNA-binding protein [Yersinia pestis PY-15]
gi|391499728|gb|EIR54311.1| single-stranded DNA-binding protein [Yersinia pestis PY-16]
gi|391500077|gb|EIR54616.1| single-stranded DNA-binding protein [Yersinia pestis PY-19]
gi|391503427|gb|EIR57626.1| single-stranded DNA-binding family protein [Yersinia pestis PY-14]
gi|391504799|gb|EIR58864.1| single-stranded DNA-binding protein [Yersinia pestis PY-25]
gi|391516994|gb|EIR69836.1| single-stranded DNA-binding protein [Yersinia pestis PY-32]
gi|391530202|gb|EIR81810.1| single-stranded DNA-binding protein [Yersinia pestis PY-29]
gi|391532665|gb|EIR84023.1| single-stranded DNA-binding protein [Yersinia pestis PY-34]
gi|391535203|gb|EIR86296.1| single-stranded DNA-binding family protein [Yersinia pestis PY-45]
gi|391547830|gb|EIR97685.1| single-stranded DNA-binding protein [Yersinia pestis PY-36]
gi|391548839|gb|EIR98597.1| single-stranded DNA-binding protein [Yersinia pestis PY-46]
gi|391549215|gb|EIR98938.1| single-stranded DNA-binding protein [Yersinia pestis PY-42]
gi|391563156|gb|EIS11498.1| single-stranded DNA-binding protein [Yersinia pestis PY-52]
gi|391564480|gb|EIS12681.1| single-stranded DNA-binding protein [Yersinia pestis PY-47]
gi|391565976|gb|EIS14018.1| single-stranded DNA-binding protein [Yersinia pestis PY-48]
gi|391567417|gb|EIS15280.1| single-stranded DNA-binding family protein [Yersinia pestis PY-54]
gi|391578751|gb|EIS24969.1| single-stranded DNA-binding protein [Yersinia pestis PY-53]
gi|391578813|gb|EIS25020.1| single-stranded DNA-binding protein [Yersinia pestis PY-55]
gi|391579847|gb|EIS25916.1| single-stranded DNA-binding protein [Yersinia pestis PY-56]
gi|391590137|gb|EIS34931.1| single-stranded DNA-binding protein [Yersinia pestis PY-58]
gi|391594248|gb|EIS38421.1| single-stranded DNA-binding protein [Yersinia pestis PY-59]
gi|391607439|gb|EIS50039.1| single-stranded DNA-binding protein [Yersinia pestis PY-60]
gi|391608567|gb|EIS51040.1| single-stranded DNA-binding protein [Yersinia pestis PY-61]
gi|391622923|gb|EIS63790.1| single-stranded DNA-binding protein [Yersinia pestis PY-63]
gi|391623391|gb|EIS64192.1| single-stranded DNA-binding protein [Yersinia pestis PY-66]
gi|391632307|gb|EIS71845.1| single-stranded DNA-binding protein [Yersinia pestis PY-71]
gi|391633611|gb|EIS72990.1| single-stranded DNA-binding protein [Yersinia pestis PY-65]
gi|391634077|gb|EIS73395.1| single-stranded DNA-binding protein [Yersinia pestis PY-72]
gi|391644475|gb|EIS82472.1| single-stranded DNA-binding protein [Yersinia pestis PY-76]
gi|391657552|gb|EIS94047.1| single-stranded DNA-binding family protein [Yersinia pestis PY-90]
gi|391664067|gb|EIS99836.1| single-stranded DNA-binding protein [Yersinia pestis PY-88]
gi|391669623|gb|EIT04742.1| single-stranded DNA-binding protein [Yersinia pestis PY-89]
gi|391673659|gb|EIT08348.1| single-stranded DNA-binding protein [Yersinia pestis PY-91]
gi|391674172|gb|EIT08807.1| single-stranded DNA-binding protein [Yersinia pestis PY-92]
gi|391674309|gb|EIT08923.1| single-stranded DNA-binding protein [Yersinia pestis PY-93]
gi|391674347|gb|EIT08960.1| single-stranded DNA-binding family protein [Yersinia pestis PY-94]
gi|391691195|gb|EIT24144.1| single-stranded DNA-binding protein [Yersinia pestis PY-98]
gi|391702677|gb|EIT34539.1| single-stranded DNA-binding protein [Yersinia pestis PY-95]
gi|391705740|gb|EIT37251.1| single-stranded DNA-binding protein [Yersinia pestis PY-96]
gi|391706037|gb|EIT37516.1| single-stranded DNA-binding protein [Yersinia pestis PY-100]
gi|391717668|gb|EIT47993.1| single-stranded DNA-binding protein [Yersinia pestis PY-99]
gi|391721999|gb|EIT51866.1| single-stranded DNA-binding protein [Yersinia pestis PY-113]
gi|391732486|gb|EIT61048.1| single-stranded DNA-binding protein [Yersinia pestis PY-102]
gi|391735583|gb|EIT63707.1| single-stranded DNA-binding protein [Yersinia pestis PY-103]
Length = 153
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G+ + E+ + G + LG
Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-AGVEKYTTEVVVNVGGTMQMLG 114
>gi|389694862|ref|ZP_10182956.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
gi|388588248|gb|EIM28541.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
Length = 179
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++L +G V + T ++ E + TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRRLSNGEPVVNLRIATSETWKDKGTGERKEKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L V ++L GS +YVEG L+ + + D G + E+ ++R G L L
Sbjct: 57 VVIFNENLARVAEQYLKKGSKVYVEGQLQTRKWTDQ-QGQEKYTTEVVLQRFRGELTIL 114
>gi|291613269|ref|YP_003523426.1| single-strand binding protein [Sideroxydans lithotrophicus ES-1]
gi|291583381|gb|ADE11039.1| single-strand binding protein [Sideroxydans lithotrophicus ES-1]
Length = 153
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG++G+ P + + +G VT +L T EN + +WH +
Sbjct: 5 KVILVGRLGKDPETRYMTNGEAVTNVTLATS---------ENWKDKSGEKQEKTEWHNL- 54
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
V+ RL V ++L GS IYVEG ++ + + D TG R EI +
Sbjct: 55 VFYRRLAEVAGEYLKKGSQIYVEGKIQTRKWQDKETGKDRYTTEIIV 101
>gi|222085984|ref|YP_002544516.1| single-stranded DNA-binding protein [Agrobacterium radiobacter K84]
gi|398379925|ref|ZP_10538043.1| single stranded DNA-binding protein [Rhizobium sp. AP16]
gi|221723432|gb|ACM26588.1| single-strand DNA binding protein [Agrobacterium radiobacter K84]
gi|397721241|gb|EJK81789.1| single stranded DNA-binding protein [Rhizobium sp. AP16]
Length = 182
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + ++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIANLNIATSETWRDRNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|291289343|ref|YP_003517675.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|290792304|gb|ADD63629.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
Length = 226
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 18 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 69
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 70 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 126
>gi|381169170|ref|ZP_09878344.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Phaeospirillum molischianum DSM 120]
gi|380681784|emb|CCG43166.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Phaeospirillum molischianum DSM 120]
Length = 168
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + G + ++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRTSQDGAKIVSLNIATSESWKDRASGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ L V ++L GS++Y+EG L+ + + D +G R E+ I R G L L
Sbjct: 57 VVIFNPNLADVAERYLRKGSSVYIEGALQTRKWTDQ-SGQERYTTEVVIGRFKGELTLL 114
>gi|423126882|ref|ZP_17114561.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5250]
gi|376396351|gb|EHT08992.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5250]
Length = 175
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQMLG 114
>gi|347447803|pdb|3TQY|A Chain A, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447804|pdb|3TQY|B Chain B, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447805|pdb|3TQY|C Chain C, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447806|pdb|3TQY|D Chain D, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
Length = 158
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 75 NGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRC 134
N G+ K IL+G +GQ P + +G V +L T +++ E + TE
Sbjct: 2 NAXARGVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTE----- 56
Query: 135 AVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
WHR++ + RL +V ++L GS IY+EG+L + + D G+ R EI
Sbjct: 57 ---WHRIAFF-NRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 104
>gi|86749830|ref|YP_486326.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
HaA2]
gi|86572858|gb|ABD07415.1| single-strand binding protein [Rhodopseudomonas palustris HaA2]
Length = 167
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T +R E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSESWRDRATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L + ++L GS +Y+EG L+ + + D
Sbjct: 57 VVIFSEGLCKIAEQYLKKGSKVYLEGQLQTRKWTD 91
>gi|419287571|ref|ZP_13829699.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11A]
gi|419292827|ref|ZP_13834902.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11B]
gi|433133062|ref|ZP_20318453.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
gi|378137550|gb|EHW98825.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11A]
gi|378149423|gb|EHX10547.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11B]
gi|431638559|gb|ELJ06591.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
Length = 150
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V + L G+ +Y+EG L + + D G+ R + EI ++ G + L
Sbjct: 57 RVVLFG-KLAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLV 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
>gi|415825680|ref|ZP_11513155.1| single-stranded DNA-binding protein [Escherichia coli OK1357]
gi|419198159|ref|ZP_13741523.1| single-stranded DNA-binding protein [Escherichia coli DEC8A]
gi|424770912|ref|ZP_18198087.1| single-stranded DNA binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|323186519|gb|EFZ71864.1| single-stranded DNA-binding protein [Escherichia coli OK1357]
gi|378045826|gb|EHW08212.1| single-stranded DNA-binding protein [Escherichia coli DEC8A]
gi|421941306|gb|EKT98709.1| single-stranded DNA binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
Length = 162
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|381406627|ref|ZP_09931308.1| single-stranded DNA-binding protein [Pantoea sp. Sc1]
gi|380735238|gb|EIB96304.1| single-stranded DNA-binding protein [Pantoea sp. Sc1]
Length = 179
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ EN+ TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGENKEVTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL- 198
RV ++ +L V ++L GS +Y+EG L + + G + I E+ + G + L
Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVYIEGQLRTRKWQGS-DGQDKYITEVVVNVGGTMQMLG 114
Query: 199 GKGGD 203
G+GG+
Sbjct: 115 GRGGN 119
>gi|325272009|ref|ZP_08138454.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
gi|324102859|gb|EGC00261.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
Length = 182
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NG + L
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDINGTMQLL 111
>gi|26987226|ref|NP_742651.1| single-stranded DNA-binding protein [Pseudomonas putida KT2440]
gi|148545770|ref|YP_001265872.1| single-stranded DNA-binding protein [Pseudomonas putida F1]
gi|167031530|ref|YP_001666761.1| single-stranded DNA-binding protein [Pseudomonas putida GB-1]
gi|386010144|ref|YP_005928421.1| Ssb [Pseudomonas putida BIRD-1]
gi|395446868|ref|YP_006387121.1| single-stranded DNA-binding protein [Pseudomonas putida ND6]
gi|397696230|ref|YP_006534113.1| Single-stranded DNA-binding protein [Pseudomonas putida DOT-T1E]
gi|421524863|ref|ZP_15971484.1| single-stranded DNA-binding protein [Pseudomonas putida LS46]
gi|37999418|sp|Q88QK5.1|SSB_PSEPK RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|24981865|gb|AAN66115.1|AE016239_10 single-stranded DNA-binding protein [Pseudomonas putida KT2440]
gi|148509828|gb|ABQ76688.1| single-strand binding protein [Pseudomonas putida F1]
gi|166858018|gb|ABY96425.1| single-strand binding protein [Pseudomonas putida GB-1]
gi|313496850|gb|ADR58216.1| Ssb [Pseudomonas putida BIRD-1]
gi|388560865|gb|AFK70006.1| single-stranded DNA-binding protein [Pseudomonas putida ND6]
gi|397332960|gb|AFO49319.1| Single-stranded DNA-binding protein [Pseudomonas putida DOT-T1E]
gi|402751326|gb|EJX11839.1| single-stranded DNA-binding protein [Pseudomonas putida LS46]
Length = 181
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG GQ P + L +G VT SL T +++ + TE WH
Sbjct: 4 GVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RVS++ ++ + ++L GS Y+EG L+ + + G+ R EI + NG + L
Sbjct: 56 RVSLFG-KVAEIAGEYLRKGSQCYIEGKLQTREWEKD--GIKRYTTEIIVDINGTMQLL 111
>gi|410664338|ref|YP_006916709.1| single-stranded DNA-binding protein [Simiduia agarivorans SA1 = DSM
21679]
gi|409026695|gb|AFU98979.1| single-stranded DNA-binding protein [Simiduia agarivorans SA1 = DSM
21679]
Length = 172
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P K + SG VT S+ T +++ + + TE WH
Sbjct: 4 GINKVILVGNLGQDPETKYMPSGGAVTNVSIATSETWKDKQTGQPQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNL 168
RV V+ RL + ++L GS +YVEG+L
Sbjct: 56 RV-VFFNRLAEIAGEYLKKGSKVYVEGSL 83
>gi|365885618|ref|ZP_09424609.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 375]
gi|365285723|emb|CCD97140.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 375]
Length = 165
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKGTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|193070408|ref|ZP_03051349.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|432771993|ref|ZP_20006308.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE54]
gi|192956227|gb|EDV86689.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|431324369|gb|ELG11822.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE54]
Length = 175
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
>gi|331649973|ref|ZP_08351049.1| single-stranded DNA-binding protein (SSB-P1) [Escherichia coli
M605]
gi|331041230|gb|EGI13384.1| single-stranded DNA-binding protein (SSB-P1) [Escherichia coli
M605]
Length = 162
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|114707073|ref|ZP_01439972.1| single-strand DNA binding protein [Fulvimarina pelagi HTCC2506]
gi|114537623|gb|EAU40748.1| single-strand DNA binding protein [Fulvimarina pelagi HTCC2506]
Length = 169
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G P ++ + G+ + FS+ T +R E TE WHRV
Sbjct: 7 KVILVGNLGADPEMRRTQDGKPIANFSVATSESWRDRNSGERREKTE--------WHRVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
+ E L V+ +++ GS +Y+EG L+ + +
Sbjct: 59 CFNEGLNKVIEQYVKKGSKVYIEGQLQTRKW 89
>gi|395233267|ref|ZP_10411509.1| single-stranded DNA-binding protein [Enterobacter sp. Ag1]
gi|394732313|gb|EJF32008.1| single-stranded DNA-binding protein [Enterobacter sp. Ag1]
Length = 176
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|375256401|ref|YP_005015568.1| single-strand binding protein [Tannerella forsythia ATCC 43037]
gi|363406465|gb|AEW20151.1| single-strand binding protein [Tannerella forsythia ATCC 43037]
Length = 149
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG+ P + SG V FSL T N R + N TE R +WH +
Sbjct: 5 KVILIGNVGKDPDVRYFDSGNAVANFSLAT-----NERGYKLANGTEIPERT--EWHNIV 57
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR 191
ER V +++ GS +Y+EG + + ++D G+ R + EI R
Sbjct: 58 ANRER-AQFVERYVKKGSMVYIEGKIRTRNYDDQ-NGIKRYVTEIHADR 104
>gi|29653623|ref|NP_819315.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 493]
gi|154707576|ref|YP_001425151.1| single-strand DNA binding protein [Coxiella burnetii Dugway
5J108-111]
gi|164686023|ref|ZP_01947649.2| single-stranded DNA-binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212218103|ref|YP_002304890.1| single-strand DNA binding protein [Coxiella burnetii CbuK_Q154]
gi|37999375|sp|Q83EP4.1|SSB_COXBU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|29540885|gb|AAO89829.1| single-strand DNA binding protein [Coxiella burnetii RSA 493]
gi|154356862|gb|ABS78324.1| single-strand DNA binding protein [Coxiella burnetii Dugway
5J108-111]
gi|164601569|gb|EAX31729.2| single-stranded DNA-binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012365|gb|ACJ19745.1| single-strand DNA binding protein [Coxiella burnetii CbuK_Q154]
Length = 158
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + +G V +L T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R++ + RL +V ++L GS IY+EG+L + + D G+ R EI
Sbjct: 56 RIAFF-NRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 101
>gi|46401640|ref|YP_006485.1| Ssb [Enterobacteria phage P1]
gi|387504738|ref|YP_006157077.1| single-stranded DNA binding protein [Escherichia coli O55:H7 str.
RM12579]
gi|417217683|ref|ZP_12023640.1| single-stranded DNA-binding protein [Escherichia coli JB1-95]
gi|419320479|ref|ZP_13862227.1| ssDNA-binding protein [Escherichia coli DEC12B]
gi|419906015|ref|ZP_14424950.1| single-stranded DNA binding protein [Escherichia coli O26:H11 str.
CVM10026]
gi|420390902|ref|ZP_14890164.1| ssDNA-binding protein [Escherichia coli EPEC C342-62]
gi|422794180|ref|ZP_16846870.1| single-strand binding protein [Escherichia coli TA007]
gi|424819175|ref|ZP_18244304.1| Ssb [Escherichia fergusonii ECD227]
gi|442593512|ref|ZP_21011455.1| Single-stranded DNA-binding protein [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|450229586|ref|ZP_21897841.1| single-stranded DNA binding protein, partial [Escherichia coli O08]
gi|60415932|sp|Q9XJG4.1|SSB_BPP1 RecName: Full=Single-stranded DNA-binding protein; AltName:
Full=SSB-P1
gi|4426959|gb|AAD20631.1| single-stranded DNA-binding protein SSB-P1 [enterobacteria phage
P1]
gi|33338667|gb|AAQ13990.1| Ssb [Enterobacteria phage P1]
gi|33338776|gb|AAQ14098.1| Ssb [Enterobacteria phage P1]
gi|323969190|gb|EGB64492.1| single-strand binding protein [Escherichia coli TA007]
gi|325495639|gb|EGC93503.1| Ssb [Escherichia fergusonii ECD227]
gi|374361858|gb|AEZ43564.1| single-stranded DNA binding protein [Escherichia coli O55:H7 str.
RM12579]
gi|378176874|gb|EHX37676.1| ssDNA-binding protein [Escherichia coli DEC12B]
gi|386193313|gb|EIH87608.1| single-stranded DNA-binding protein [Escherichia coli JB1-95]
gi|388380127|gb|EIL42751.1| single-stranded DNA binding protein [Escherichia coli O26:H11 str.
CVM10026]
gi|391313637|gb|EIQ71214.1| ssDNA-binding protein [Escherichia coli EPEC C342-62]
gi|441606676|emb|CCP96782.1| Single-stranded DNA-binding protein [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|449312985|gb|EMD03219.1| single-stranded DNA binding protein, partial [Escherichia coli O08]
Length = 162
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|115524894|ref|YP_781805.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
BisA53]
gi|115518841|gb|ABJ06825.1| single-strand binding protein [Rhodopseudomonas palustris BisA53]
Length = 166
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + + T ++ E + TE WHR
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDKNSGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L VV ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCRVVEQYLKKGAKVYIEGQLQTRKWTD 91
>gi|83311478|ref|YP_421742.1| single-stranded DNA-binding protein [Magnetospirillum magneticum
AMB-1]
gi|82946319|dbj|BAE51183.1| Single-stranded DNA-binding protein [Magnetospirillum magneticum
AMB-1]
Length = 167
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + G + ++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRTSQDGSKIVNLNIATSETWKDRGTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ L V ++L GS++YVEG L+ + + D +G + E+ I R G L L
Sbjct: 57 VVIFNPNLADVAERYLRKGSSVYVEGALQTRKWTDQ-SGQEKYTTEVVIGRFKGELTLL 114
>gi|359443274|ref|ZP_09233117.1| single-strand DNA-binding protein [Pseudoalteromonas sp. BSi20429]
gi|358034852|dbj|GAA69366.1| single-strand DNA-binding protein [Pseudoalteromonas sp. BSi20429]
Length = 240
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ + + TE WH
Sbjct: 4 GVNKVILVGNLGQDPEVRYMPNGNGVANITLATSDSYKDKNTGQMVDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V+ +L +V ++ GS IYVEG L+ + + D G + EI + G++ L
Sbjct: 56 RV-VFFGKLAEIVGEYCRKGSQIYVEGKLQTRKWTDQ-QGQEKYTTEIVVDGFTGQMQML 113
Query: 199 G-KGGDAQ 205
G +GGD Q
Sbjct: 114 GARGGDQQ 121
>gi|159044155|ref|YP_001532949.1| single stranded DNA-binding protein [Dinoroseobacter shibae DFL 12]
gi|157911915|gb|ABV93348.1| single stranded DNA-binding protein [Dinoroseobacter shibae DFL 12]
Length = 168
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T +R E TE WH
Sbjct: 5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGERREKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+++ E L V ++L GS +Y+EG LE + + D +G R E+ +R
Sbjct: 57 VAIFSEPLARVAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|395767184|ref|ZP_10447719.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
gi|395414497|gb|EJF80939.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
Length = 172
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEVRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL-GK 200
++ E L V ++L GS IY+EG L+ + + D G R EI +++ G L L G+
Sbjct: 59 IFNENLVKVAEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEIVLQKYRGELQMLDGR 117
Query: 201 G 201
G
Sbjct: 118 G 118
>gi|161831024|ref|YP_001596218.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 331]
gi|161762891|gb|ABX78533.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 331]
Length = 158
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + +G V +L T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
R++ + RL +V ++L GS IY+EG+L + + D G+ R EI
Sbjct: 56 RIAFF-NRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 101
>gi|37999366|sp|P77953.1|SSB_SHEHA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|1490779|gb|AAB57884.1| single stranded DNA-binding protein [Shewanella hanedai]
Length = 226
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQPQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL + ++L GS IY+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEIAGEYLKKGSKIYIEGKLQTSKWQDQATGQDRYKTEI 102
>gi|456355565|dbj|BAM90010.1| single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Agromonas oligotrophica S58]
Length = 164
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKGTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V ++ E L V ++L G+ +Y+EG L+ + + D +G+ + E+ ++
Sbjct: 57 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWTDQ-SGVEKYSTEVVLQ 105
>gi|383813036|ref|ZP_09968463.1| single-stranded DNA-binding protein [Serratia sp. M24T3]
gi|383298446|gb|EIC86753.1| single-stranded DNA-binding protein [Serratia sp. M24T3]
Length = 182
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + EI + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEIVVNVGGTMQML 113
>gi|56477626|ref|YP_159215.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Aromatoleum aromaticum EbN1]
gi|56313669|emb|CAI08314.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Aromatoleum aromaticum EbN1]
Length = 163
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 13/135 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G+ P + SG + ++ T ++ E + TE WHRV
Sbjct: 6 KVILIGNLGKDPETRYAPSGDAICNITVATSETWKDKATGEKKEQTE--------WHRV- 56
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKGG 202
V+ RL +V ++L GS IYVEG L+ + + D G R EI R + LG
Sbjct: 57 VFFGRLAEIVAQYLRKGSQIYVEGRLQTRKWQDK-EGQDRYTTEI---RGDEMKMLGSRQ 112
Query: 203 DAQPPSPSEVRGAGY 217
A S + GY
Sbjct: 113 GAGDASGRQYDAGGY 127
>gi|422808110|ref|ZP_16856537.1| single-strand binding protein [Escherichia fergusonii B253]
gi|324111115|gb|EGC05101.1| single-strand binding protein [Escherichia fergusonii B253]
Length = 162
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|323491664|ref|ZP_08096842.1| single-stranded DNA-binding protein [Vibrio brasiliensis LMG 20546]
gi|323314026|gb|EGA67112.1| single-stranded DNA-binding protein [Vibrio brasiliensis LMG 20546]
Length = 177
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGSDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV+++ +L V ++L GS +YVEG L+ + + D G R E+ ++ NG + L
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRYTTEVVVQGFNGVMQML 114
Query: 199 GKGGDAQPPSPS 210
GG AQ +P+
Sbjct: 115 --GGRAQGGAPA 124
>gi|238754669|ref|ZP_04616022.1| Single-stranded DNA-binding protein [Yersinia ruckeri ATCC 29473]
gi|238707128|gb|EEP99492.1| Single-stranded DNA-binding protein [Yersinia ruckeri ATCC 29473]
Length = 183
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|432619980|ref|ZP_19856044.1| plasmid-derived single-stranded DNA-binding protein, partial
[Escherichia coli KTE75]
gi|431145789|gb|ELE47396.1| plasmid-derived single-stranded DNA-binding protein, partial
[Escherichia coli KTE75]
Length = 116
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|325981395|ref|YP_004293797.1| single-strand binding protein [Nitrosomonas sp. AL212]
gi|325530914|gb|ADZ25635.1| single-strand binding protein [Nitrosomonas sp. AL212]
Length = 150
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G+ P + + SG VT +L T ++ + E +WHR
Sbjct: 4 VNKVILIGNLGKDPETRYMSSGDAVTNITLATTDTWKDKNGEKQER---------TEWHR 54
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
V+ Y +L + ++L G ++Y+EG LE + + D +G+ R +I
Sbjct: 55 VTFY-RKLAEIAGEYLKKGRSVYIEGRLETRKWTDK-SGVERYTTDI 99
>gi|418515088|ref|ZP_13081277.1| single-stranded DNA binding protein [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|433129997|ref|ZP_20315444.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
gi|366077326|gb|EHN41344.1| single-stranded DNA binding protein [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|431647861|gb|ELJ15265.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
Length = 162
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|300938357|ref|ZP_07153109.1| single-strand binding family protein, partial [Escherichia coli MS
21-1]
gi|300456672|gb|EFK20165.1| single-strand binding family protein [Escherichia coli MS 21-1]
Length = 149
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|359439343|ref|ZP_09229319.1| single-strand DNA-binding protein [Pseudoalteromonas sp. BSi20311]
gi|358026013|dbj|GAA65568.1| single-strand DNA-binding protein [Pseudoalteromonas sp. BSi20311]
Length = 230
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ + + TE WH
Sbjct: 4 GVNKVILVGNLGQDPEVRYMPNGNGVANITLATSDSYKDKNTGQMVDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V+ +L +V ++ GS IYVEG L+ + + D G + EI + G++ L
Sbjct: 56 RV-VFFGKLAEIVGEYCRKGSQIYVEGKLQTRKWTDQ-QGQEKYTTEIVVDGFTGQMQML 113
Query: 199 G-KGGDAQ 205
G +GGD Q
Sbjct: 114 GARGGDQQ 121
>gi|260871143|ref|YP_003237923.1| single-stranded DNA binding protein [Escherichia coli O111:H- str.
11128]
gi|420115491|ref|ZP_14625035.1| single-stranded DNA binding protein [Escherichia coli O26:H11 str.
CVM10021]
gi|257767722|dbj|BAI39215.1| single-stranded DNA binding protein [Escherichia coli O111:H- str.
11128]
gi|394406524|gb|EJE81521.1| single-stranded DNA binding protein [Escherichia coli O26:H11 str.
CVM10021]
Length = 162
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|425246076|ref|ZP_18639340.1| single-stranded DNA-binding protein [Escherichia coli 5905]
gi|432612458|ref|ZP_19848619.1| single-stranded DNA-binding protein [Escherichia coli KTE72]
gi|408176865|gb|EKI03694.1| single-stranded DNA-binding protein [Escherichia coli 5905]
gi|431147708|gb|ELE49054.1| single-stranded DNA-binding protein [Escherichia coli KTE72]
Length = 162
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|431911644|gb|ELK13792.1| Wee1-like protein kinase 2 [Pteropus alecto]
Length = 701
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + + ENE
Sbjct: 565 LERSLNRVQLLGRVGQDPVMRQIEGKNPVTIFSLATNEMWKSG---ENEAYQMGDVSQKT 621
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 622 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 660
>gi|28198535|ref|NP_778849.1| single-stranded DNA-binding protein [Xylella fastidiosa Temecula1]
gi|182681214|ref|YP_001829374.1| single-stranded DNA-binding protein [Xylella fastidiosa M23]
gi|386084713|ref|YP_006000995.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558357|ref|ZP_12209339.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
gi|37999376|sp|Q87DQ5.1|SSB_XYLFT RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|28056619|gb|AAO28498.1| single-stranded DNA binding protein [Xylella fastidiosa Temecula1]
gi|182631324|gb|ACB92100.1| single-strand binding protein [Xylella fastidiosa M23]
gi|307579660|gb|ADN63629.1| single-stranded DNA-binding protein [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338179161|gb|EGO82125.1| Single-stranded DNA-binding protein [Xylella fastidiosa EB92.1]
Length = 164
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P K + G T+T SL T +R ++ E +WH
Sbjct: 4 GINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKDGNTQER---------TEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFN 174
RV + +LG + ++L GS Y+EG++ F
Sbjct: 55 RVKFFG-KLGEIAGEYLRKGSQCYIEGSIRYDKFT 88
>gi|392552974|ref|ZP_10300111.1| single-strand binding protein [Pseudoalteromonas spongiae
UST010723-006]
Length = 224
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 11/125 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +GQ P + + +G V +L T ++ + + TE WH
Sbjct: 4 GINKVILVGNLGQDPEVRYMPNGNAVANITLATSDSYKDKNTGQLVDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV V+ +L VV ++ GS IYVEG L+ + + D G + EI + G++ L
Sbjct: 56 RV-VFFGKLAEVVGEYCRKGSQIYVEGKLQTRKWQDQ-QGQEKYTTEIVVDGFTGQMQML 113
Query: 199 GKGGD 203
G GD
Sbjct: 114 GGRGD 118
>gi|157372672|ref|YP_001480661.1| single-strand binding protein [Serratia proteamaculans 568]
gi|157324436|gb|ABV43533.1| single-strand binding protein [Serratia proteamaculans 568]
Length = 181
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + EI + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEIVVNVGGTMQML 113
>gi|163760270|ref|ZP_02167353.1| single-strand DNA-binding protein [Hoeflea phototrophica DFL-43]
gi|162282669|gb|EDQ32957.1| single-strand DNA-binding protein [Hoeflea phototrophica DFL-43]
Length = 172
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G +G P K+ + GR + S+ T ++ E TE WHR
Sbjct: 5 VNKVILIGNLGADPDIKRTQDGRPIANLSIATSESWRDKNSGERREKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ E L + +L GS +Y+EG L+ + + D +G + E+ ++ NG L L
Sbjct: 57 VVIFNEGLCKIAESYLKKGSKVYIEGALQTRKWTDQ-SGQDKYSTEVVLQGFNGNLTML 114
>gi|319406630|emb|CBI80271.1| single-strand binding protein (ssb) [Bartonella sp. 1-1C]
Length = 148
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K L+G +G P K + SG + F L T ++ + TE WH V
Sbjct: 4 KVTLIGYLGADPEGKMMPSGAEIVNFKLATSQSYTDKETHQKIKKTE--------WHSVV 55
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI-RRNGRLVFLGKG 201
++ +L + +++L GS IY+EG L+ + + D G I EI + + G L L
Sbjct: 56 IFNPQLAKIALQYLNKGSKIYLEGQLQTRKWQDK-KGQDHSITEIVLPQYKGELKLLDAR 114
Query: 202 GDAQPPSPSEVRGAGY 217
D Q SPS Y
Sbjct: 115 KD-QYTSPSPTTSQNY 129
>gi|386611932|ref|YP_006136976.1| ssDNA-binding protein [Escherichia coli UMNK88]
gi|410496121|ref|YP_006903429.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|450236559|ref|ZP_21898614.1| single-stranded DNA-binding protein [Escherichia coli O08]
gi|321271509|gb|ADW79598.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|332346568|gb|AEE59900.1| single-stranded DNA-binding protein Ssb [Escherichia coli UMNK88]
gi|449311118|gb|EMD01519.1| single-stranded DNA-binding protein [Escherichia coli O08]
Length = 175
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ ++ V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KVAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
Query: 200 ----KGGDAQP 206
+ AQP
Sbjct: 114 SAPQQNAQAQP 124
>gi|212213221|ref|YP_002304157.1| single-strand DNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212011631|gb|ACJ19012.1| single-strand DNA binding protein [Coxiella burnetii CbuG_Q212]
Length = 158
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + +G V +L T +++ E + TE WH
Sbjct: 4 GVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTGELQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
R++ + RL +V ++L GS IY+EG+L + + D G+ R EI L G
Sbjct: 56 RIAFF-NRLAEIVGEYLRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEIIANEMHMLDNRG 113
Query: 200 KGGDAQPPSPSE 211
G + SE
Sbjct: 114 AGNSGNYGNHSE 125
>gi|209885356|ref|YP_002289213.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|337741022|ref|YP_004632750.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
gi|386030039|ref|YP_005950814.1| ssDNA-binding protein [Oligotropha carboxidovorans OM4]
gi|209873552|gb|ACI93348.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|336095107|gb|AEI02933.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM4]
gi|336098686|gb|AEI06509.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
Length = 160
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + S+ T ++ E + TE WHR
Sbjct: 5 VNKVILVGNLGADPDVRRTQDGRPIVNLSIATSDTWRDKATGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 57 VVIFNEGLCRVAEQYLKKGAKVYIEGALQTRKWQD 91
>gi|432404821|ref|ZP_19647549.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE26]
gi|430920862|gb|ELC41735.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE26]
Length = 170
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 11/117 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG++G+ P + + +G V + T +++ E + TE WHRV
Sbjct: 3 KVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGEMKEQTE--------WHRVV 54
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 55 LFG-KLAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 108
>gi|365850084|ref|ZP_09390552.1| single-strand binding family protein [Yokenella regensburgei ATCC
43003]
gi|364568409|gb|EHM46054.1| single-strand binding family protein [Yokenella regensburgei ATCC
43003]
Length = 189
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYLPNGGAVCSIALATSESWRDKTTGELKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + EI + G + LG
Sbjct: 57 RVVLF-GKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEIVVNVGGTMQMLG 114
>gi|418296294|ref|ZP_12908138.1| single-stranded DNA-binding protein [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539726|gb|EHH08964.1| single-stranded DNA-binding protein [Agrobacterium tumefaciens
CCNWGS0286]
Length = 194
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 19 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 70
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 71 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 119
>gi|301772618|ref|XP_002921720.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 1 [Ailuropoda melanoleuca]
Length = 138
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 26 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENEAYQMGDVSQKT 82
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 83 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
>gi|157148035|ref|YP_001455354.1| single-stranded DNA-binding protein [Citrobacter koseri ATCC
BAA-895]
gi|157085240|gb|ABV14918.1| hypothetical protein CKO_03842 [Citrobacter koseri ATCC BAA-895]
Length = 178
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGTMQMLG 114
>gi|420353034|ref|ZP_14854158.1| plasmid-derived single-stranded DNA-binding protein [Shigella
boydii 4444-74]
gi|391280142|gb|EIQ38817.1| plasmid-derived single-stranded DNA-binding protein [Shigella
boydii 4444-74]
Length = 175
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K I VG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVIFVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G+ +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGAQVYIEGKLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|335037923|ref|ZP_08531222.1| single-strand DNA-binding protein [Agrobacterium sp. ATCC 31749]
gi|333790587|gb|EGL61985.1| single-strand DNA-binding protein [Agrobacterium sp. ATCC 31749]
Length = 191
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 19 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 70
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 71 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 119
>gi|163802888|ref|ZP_02196776.1| single-strand DNA-binding protein [Vibrio sp. AND4]
gi|159173295|gb|EDP58121.1| single-strand DNA-binding protein [Vibrio sp. AND4]
Length = 184
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG +G P + + SG V ++ T ++ E TE WH
Sbjct: 5 GINKVILVGNLGNDPEIRYMPSGGAVANITIATSESWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV+++ +L V ++L GS +Y+EG L+ + + D +G R E+ ++ NG + L
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQGFNGVMQML 114
Query: 199 GKGGDAQPPSP 209
GG AQ +P
Sbjct: 115 --GGRAQGGAP 123
>gi|71559065|ref|YP_271792.1| single-strand binding protein [Salmonella enterica]
gi|68166364|gb|AAY88125.1| single-strand binding protein [Salmonella enterica]
Length = 172
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T R+ E TE WH
Sbjct: 5 GVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRVRQDGEMREHTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ +L + ++L G+ +Y+EG L + + D +G + E+ + G + LG
Sbjct: 57 RVVVFG-KLAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKSTTEVIVNVGGTMQMLG 114
Query: 200 K 200
+
Sbjct: 115 R 115
>gi|424862741|ref|ZP_18286654.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86A]
gi|400757362|gb|EJP71573.1| single-strand binding family protein [SAR86 cluster bacterium
SAR86A]
Length = 145
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + V S+ T ++ EN + TE WH
Sbjct: 4 GVNKVILVGNLGQKPEMRYTATQTAVANLSIATTESWKDKESGENRDKTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
RV V+ L + K+L GS++YVEG ++ + + D
Sbjct: 56 RV-VFFGNLAEIAEKYLDKGSSVYVEGKIQTRKWQD 90
>gi|322834752|ref|YP_004214779.1| single-strand binding protein [Rahnella sp. Y9602]
gi|384259972|ref|YP_005403906.1| single-strand binding protein [Rahnella aquatilis HX2]
gi|321169953|gb|ADW75652.1| single-strand binding protein [Rahnella sp. Y9602]
gi|380755948|gb|AFE60339.1| single-strand binding protein [Rahnella aquatilis HX2]
Length = 180
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLKKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|442557528|ref|YP_007354963.1| Ssb [Citrobacter freundii]
gi|440685587|gb|AGC23556.1| Ssb [Citrobacter freundii]
Length = 178
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 24 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEMKEQTE--------WH 75
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G+ + E+ + G + LG
Sbjct: 76 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-AGVEKYTTEVVVNVGGTMQMLG 133
>gi|119358075|ref|YP_912719.1| single-strand binding protein [Chlorobium phaeobacteroides DSM 266]
gi|119355424|gb|ABL66295.1| single-strand binding protein [Chlorobium phaeobacteroides DSM 266]
Length = 171
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
+ G+ K +L+G +G P + SG+TVT F+L T + E
Sbjct: 1 MAKGLNKVMLIGHLGGDPESRNTASGQTVTNFTLATTESFKDATGTWQEK---------T 51
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
+WHR+ + +L + ++L G +YVEG L+ + ++D +G + EI
Sbjct: 52 EWHRIVTWG-KLAEICSQYLKKGRQVYVEGRLQTRSWDDQKSGEKKYTTEIVC 103
>gi|59710960|ref|YP_203736.1| single-stranded DNA-binding protein [Vibrio fischeri ES114]
gi|197335275|ref|YP_002155110.1| single-stranded DNA-binding protein [Vibrio fischeri MJ11]
gi|59479061|gb|AAW84848.1| single-stranded DNA-binding protein [Vibrio fischeri ES114]
gi|197316765|gb|ACH66212.1| single-stranded DNA-binding protein [Vibrio fischeri MJ11]
Length = 177
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGQDPEIRYMPSGGAVANITIATSETWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV+++ +L V ++L GS +YVEG L+ + + D G R E+ ++ NG + L
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRFTTEVVVQGFNGVMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|423685067|ref|ZP_17659875.1| single-stranded DNA-binding protein [Vibrio fischeri SR5]
gi|371495568|gb|EHN71163.1| single-stranded DNA-binding protein [Vibrio fischeri SR5]
Length = 178
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V ++ T ++ E TE WH
Sbjct: 5 GVNKVILVGNLGQDPEIRYMPSGGAVANITIATSETWRDKATGEQREKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
RV+++ +L V ++L GS +YVEG L+ + + D G R E+ ++ NG + L
Sbjct: 57 RVALFG-KLAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRFTTEVVVQGFNGVMQML 114
Query: 199 G 199
G
Sbjct: 115 G 115
>gi|359783709|ref|ZP_09286920.1| single-stranded DNA-binding protein [Pseudomonas psychrotolerans
L19]
gi|359368413|gb|EHK68993.1| single-stranded DNA-binding protein [Pseudomonas psychrotolerans
L19]
Length = 186
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG G P + + +G VT +L T +++ + ++ TE WH
Sbjct: 4 GVNKVILVGNAGADPETRYMPNGNAVTNVTLATSESWKDKQTGQQQDRTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV V+ RL + +++ GS +YVEG L + + G R EI + NG + L
Sbjct: 56 RV-VFFGRLAEIAGEYIRKGSQVYVEGTLRTRKWQGQ-DGQDRYTTEIVVDINGNMQLL 112
>gi|385786143|ref|YP_005817252.1| ssDNA-binding protein [Erwinia sp. Ejp617]
gi|310765415|gb|ADP10365.1| single strand DNA-binding protein [Erwinia sp. Ejp617]
Length = 168
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K LVG +GQ P + + +G V +L T +++ E TE WH
Sbjct: 12 GINKVTLVGHLGQDPEVRSMPNGNAVAGLNLATSETWRDKQSGETREKTE--------WH 63
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG + + + D G+ R E + NG + LG
Sbjct: 64 RVVLFG-KLAEVAAEYLRKGVQVYIEGQMRTRKWTDN-NGIDRWTTETVVGVNGTMQMLG 121
>gi|440232746|ref|YP_007346539.1| single stranded DNA-binding protein [Serratia marcescens FGI94]
gi|440054451|gb|AGB84354.1| single stranded DNA-binding protein [Serratia marcescens FGI94]
Length = 179
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANMTLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG+L+ + + D +G R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGSLQTRKWTDQ-SGQDRYTTEVVVNVGGSMQML 113
>gi|383191946|ref|YP_005202074.1| single stranded DNA-binding protein [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371590204|gb|AEX53934.1| single stranded DNA-binding protein [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 180
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLKKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|301629821|ref|XP_002944032.1| PREDICTED: single-stranded DNA-binding protein-like [Xenopus
(Silurana) tropicalis]
Length = 177
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I+VG +G+ P + SG V ++ T ++ EN+ TE WHR
Sbjct: 4 INKVIIVGNLGRDPEMRTFPSGDQVANVTIATTDRWRDKNTGENKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V V+ RL +V ++L GS +YVEG+L + + D
Sbjct: 56 V-VFNGRLAEIVGQYLRKGSQVYVEGSLRTRKWTD 89
>gi|148555367|ref|YP_001262949.1| single-strand binding protein [Sphingomonas wittichii RW1]
gi|148500557|gb|ABQ68811.1| single-strand binding protein [Sphingomonas wittichii RW1]
Length = 195
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + ++G V + T +R E + TE WH
Sbjct: 5 VNKVILVGNLGRDPESRSFQNGGKVVNLRVATSEQWKDRNTGERRDKTE--------WHS 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V+++ E L V ++L GS +Y+EG L+ + + D
Sbjct: 57 VAIFNEALANVAERYLRKGSKVYLEGQLQTRKWTD 91
>gi|78186149|ref|YP_374192.1| single-strand binding protein [Chlorobium luteolum DSM 273]
gi|78166051|gb|ABB23149.1| single-strand binding protein [Chlorobium luteolum DSM 273]
Length = 163
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 10/110 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K +L+G +G P + + SG+TV F+L T E+ + A + +WH
Sbjct: 4 GLNKVMLIGNLGNDPELRTIPSGQTVANFTLATS---------ESFKDSSGAMQERTEWH 54
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
R+ + RL + ++L G +YVEG ++ + ++D TG + +I +
Sbjct: 55 RIVAW-GRLAEICGQYLKKGRQVYVEGRIQTRSWDDQKTGEKKYATDIVV 103
>gi|419172558|ref|ZP_13716431.1| single-stranded DNA-binding protein [Escherichia coli DEC7A]
gi|419183124|ref|ZP_13726731.1| ssDNA-binding protein [Escherichia coli DEC7C]
gi|419188882|ref|ZP_13732385.1| ssDNA-binding protein [Escherichia coli DEC7D]
gi|419193785|ref|ZP_13737227.1| single-stranded DNA-binding protein [Escherichia coli DEC7E]
gi|420388999|ref|ZP_14888294.1| single-stranded DNA-binding protein [Escherichia coli EPECa12]
gi|378011607|gb|EHV74548.1| single-stranded DNA-binding protein [Escherichia coli DEC7A]
gi|378021206|gb|EHV83924.1| ssDNA-binding protein [Escherichia coli DEC7C]
gi|378024132|gb|EHV86793.1| ssDNA-binding protein [Escherichia coli DEC7D]
gi|378035219|gb|EHV97778.1| single-stranded DNA-binding protein [Escherichia coli DEC7E]
gi|391298725|gb|EIQ56721.1| single-stranded DNA-binding protein [Escherichia coli EPECa12]
Length = 162
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|237746779|ref|ZP_04577259.1| single-stranded DNA-binding protein [Oxalobacter formigenes HOxBLS]
gi|229378130|gb|EEO28221.1| single-stranded DNA-binding protein [Oxalobacter formigenes HOxBLS]
Length = 156
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
I K I+VG +G+ P + L SG VT ++ T ++ E + TE WHR
Sbjct: 4 INKVIIVGNLGRDPENRYLPSGEQVTGIAVATTDRWKDKATGEQKEATE--------WHR 55
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGK 200
VS + +L + ++L GS +Y+EG L + + D G+ R EI L
Sbjct: 56 VSFFG-KLAEIAGQYLKKGSQVYIEGRLRTRKYTDK-EGIDRYATEIIADTMQMLGSRQG 113
Query: 201 GGDAQPPSPSEVRGA 215
GD PS+ RGA
Sbjct: 114 AGD-----PSDDRGA 123
>gi|114564862|ref|YP_752376.1| single-strand binding protein [Shewanella frigidimarina NCIMB 400]
gi|1490785|gb|AAB57887.1| single stranded DNA-binding protein [Shewanella sp. SC2A]
gi|114336155|gb|ABI73537.1| single-strand binding protein [Shewanella frigidimarina NCIMB 400]
Length = 242
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTIATSESWKDQQGQMQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL + ++L GS +Y+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEIAGEYLKKGSKVYLEGKLQTSKWQDQTTGQDRYKTEI 102
>gi|378582948|ref|ZP_09831555.1| single-stranded DNA-binding protein [Pantoea stewartii subsp.
stewartii DC283]
gi|377814393|gb|EHT97536.1| single-stranded DNA-binding protein [Pantoea stewartii subsp.
stewartii DC283]
Length = 173
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 16/138 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGADPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D G + E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-AGTEKYTTEVVVNVGGTMQMLG 114
Query: 200 ------KGGDAQPPSPSE 211
G +AQ P +
Sbjct: 115 GRSANTNGNNAQSDHPQQ 132
>gi|385786240|ref|YP_005817349.1| ssDNA-binding protein [Erwinia sp. Ejp617]
gi|310765512|gb|ADP10462.1| Single-stranded DNA-binding protein [Erwinia sp. Ejp617]
Length = 181
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|259909919|ref|YP_002650275.1| ssDNA-binding protein [Erwinia pyrifoliae Ep1/96]
gi|387872909|ref|YP_005804296.1| protein ssb [Erwinia pyrifoliae DSM 12163]
gi|224965541|emb|CAX57073.1| Single-stranded DNA-binding protein [Erwinia pyrifoliae Ep1/96]
gi|283480009|emb|CAY75925.1| ssb [Erwinia pyrifoliae DSM 12163]
Length = 183
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|420688955|ref|ZP_15172556.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-52]
gi|391576800|gb|EIS23304.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-52]
Length = 167
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|417239873|ref|ZP_12036497.1| putative single-stranded DNA-binding protein [Escherichia coli
9.0111]
gi|432620038|ref|ZP_19856100.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
gi|386212987|gb|EII23425.1| putative single-stranded DNA-binding protein [Escherichia coli
9.0111]
gi|431145623|gb|ELE47237.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
Length = 124
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 79 PGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQW 138
GI K L+G +GQ P + +++G TV S+ T +++ E + TE W
Sbjct: 4 KGINKVTLIGNLGQDPEIRCMQNGVTVANLSIATSETWRDKQSGEIKENTE--------W 55
Query: 139 HRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
HRV +Y +L + L G +Y+EG L + + D G EI + + G + L
Sbjct: 56 HRVVIYN-KLAEISRDFLCKGMQVYIEGTLRYRKWTDK-DGEEHYTTEIVVDQKGTMQML 113
Query: 199 G 199
G
Sbjct: 114 G 114
>gi|419028958|ref|ZP_13576131.1| ssDNA-binding protein [Escherichia coli DEC2C]
gi|377880475|gb|EHU45043.1| ssDNA-binding protein [Escherichia coli DEC2C]
Length = 162
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V S+ T +++ + + TE WH
Sbjct: 5 GVNKVILIGTLGQDPEIRYIPNGGAVGRLSIATNESWRDKQTGQQKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
+V ++ +L + ++L GS +Y+EG L+ + + D G+ R EI + + G + +G
Sbjct: 57 KVVLFG-KLAEIASEYLRKGSQVYIEGKLKTRKWTDD-AGVERYTTEIIVSQGGTMQMIG 114
>gi|420798063|ref|ZP_15268162.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-92]
gi|391688315|gb|EIT21543.1| single-stranded DNA-binding protein, partial [Yersinia pestis
PY-92]
Length = 118
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQMLG 114
>gi|440901653|gb|ELR52553.1| Single-stranded DNA-binding protein, mitochondrial, partial [Bos
grunniens mutus]
Length = 140
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAV 136
L+ + + L+G+VGQ PV ++++ VT+FSL T + R ENE
Sbjct: 18 LERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMW---RSGENETYQMGDVSQKT 74
Query: 137 QWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
WHR+SV+ L V +++ GS IYVEG ++ + D
Sbjct: 75 TWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDK 114
>gi|1490783|gb|AAB57886.1| single stranded DNA-binding protein [Shewanella sp. F1A]
Length = 231
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +G+ P + + +G V F++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREI 187
+ +Y RL V ++L GS +Y+EG L+ + D TG R EI
Sbjct: 56 NIVMY-RRLAEVAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEI 102
>gi|24375515|ref|NP_719558.1| single-strand binding protein Ssb [Shewanella oneidensis MR-1]
gi|37999432|sp|Q8EA81.1|SSB_SHEON RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|24350384|gb|AAN57002.1| single-strand binding protein Ssb [Shewanella oneidensis MR-1]
Length = 238
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V ++ T +++ + E +WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQER---------TEWH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L + ++L GS +Y+EG L+ + + D +G R E+ I ++G + LG
Sbjct: 56 RVVLF-GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQ-SGQDRYSTEVVIDQSGSMQMLG 113
Query: 200 ---KGGDAQP 206
+GG P
Sbjct: 114 SRNQGGQGAP 123
>gi|22124496|ref|NP_667919.1| single-stranded DNA-binding protein [Yersinia pestis KIM10+]
gi|45440334|ref|NP_991873.1| single-stranded DNA-binding protein [Yersinia pestis biovar
Microtus str. 91001]
gi|51594734|ref|YP_068925.1| single-stranded DNA-binding protein [Yersinia pseudotuberculosis IP
32953]
gi|108809950|ref|YP_653866.1| single-stranded DNA-binding protein [Yersinia pestis Antiqua]
gi|108813505|ref|YP_649272.1| single-stranded DNA-binding protein [Yersinia pestis Nepal516]
gi|145600894|ref|YP_001164970.1| single-stranded DNA-binding protein [Yersinia pestis Pestoides F]
gi|150260629|ref|ZP_01917357.1| single-strand binding protein [Yersinia pestis CA88-4125]
gi|153949889|ref|YP_001402714.1| single-stranded DNA-binding protein [Yersinia pseudotuberculosis IP
31758]
gi|162419729|ref|YP_001605325.1| single-stranded DNA-binding protein [Yersinia pestis Angola]
gi|165926670|ref|ZP_02222502.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936564|ref|ZP_02225132.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010586|ref|ZP_02231484.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213923|ref|ZP_02239958.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402473|ref|ZP_02307930.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419378|ref|ZP_02311131.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426200|ref|ZP_02317953.1| single-strand binding protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|170026063|ref|YP_001722568.1| single-stranded DNA-binding protein [Yersinia pseudotuberculosis
YPIII]
gi|186893737|ref|YP_001870849.1| single-stranded DNA-binding protein [Yersinia pseudotuberculosis
PB1/+]
gi|218927530|ref|YP_002345405.1| single-stranded DNA-binding protein [Yersinia pestis CO92]
gi|229836582|ref|ZP_04456748.1| Single-stranded DNA-binding protein [Yersinia pestis Pestoides A]
gi|229840190|ref|ZP_04460349.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842272|ref|ZP_04462427.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903990|ref|ZP_04519103.1| Single-stranded DNA-binding protein [Yersinia pestis Nepal516]
gi|294502390|ref|YP_003566452.1| single-strand DNA-binding protein [Yersinia pestis Z176003]
gi|384120877|ref|YP_005503497.1| single-strand DNA-binding protein [Yersinia pestis D106004]
gi|384124755|ref|YP_005507369.1| single-strand DNA-binding protein [Yersinia pestis D182038]
gi|384137696|ref|YP_005520398.1| single-stranded DNA-binding protein [Yersinia pestis A1122]
gi|384413307|ref|YP_005622669.1| ssDNA-binding protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420614788|ref|ZP_15105808.1| single-stranded DNA-binding family protein [Yersinia pestis PY-14]
gi|420700025|ref|ZP_15182238.1| single-stranded DNA-binding family protein [Yersinia pestis PY-54]
gi|421761752|ref|ZP_16198552.1| single-stranded DNA-binding protein [Yersinia pestis INS]
gi|37999452|sp|Q8ZJ06.1|SSB_YERPE RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|21957289|gb|AAM84170.1|AE013660_5 ssDNA-binding protein [Yersinia pestis KIM10+]
gi|45435190|gb|AAS60750.1| single-strand binding protein [Yersinia pestis biovar Microtus str.
91001]
gi|51588016|emb|CAH19620.1| single-strand binding protein [Yersinia pseudotuberculosis IP
32953]
gi|108777153|gb|ABG19672.1| single-strand binding protein [Yersinia pestis Nepal516]
gi|108781863|gb|ABG15921.1| single-strand binding protein [Yersinia pestis Antiqua]
gi|115346141|emb|CAL19009.1| single-strand binding protein [Yersinia pestis CO92]
gi|145212590|gb|ABP41997.1| single-strand binding protein [Yersinia pestis Pestoides F]
gi|149290037|gb|EDM40114.1| single-strand binding protein [Yersinia pestis CA88-4125]
gi|152961384|gb|ABS48845.1| single-strand binding protein [Yersinia pseudotuberculosis IP
31758]
gi|162352544|gb|ABX86492.1| single-strand binding protein [Yersinia pestis Angola]
gi|165915680|gb|EDR34289.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921293|gb|EDR38517.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990676|gb|EDR42977.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204898|gb|EDR49378.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963372|gb|EDR59393.1| single-strand binding protein [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048161|gb|EDR59569.1| single-strand binding protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054911|gb|EDR64713.1| single-strand binding protein [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169752597|gb|ACA70115.1| single-strand binding protein [Yersinia pseudotuberculosis YPIII]
gi|186696763|gb|ACC87392.1| single-strand binding protein [Yersinia pseudotuberculosis PB1/+]
gi|229679760|gb|EEO75863.1| Single-stranded DNA-binding protein [Yersinia pestis Nepal516]
gi|229690582|gb|EEO82636.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696556|gb|EEO86603.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706266|gb|EEO92274.1| Single-stranded DNA-binding protein [Yersinia pestis Pestoides A]
gi|262360473|gb|ACY57194.1| single-strand DNA-binding protein [Yersinia pestis D106004]
gi|262364419|gb|ACY60976.1| single-strand DNA-binding protein [Yersinia pestis D182038]
gi|294352849|gb|ADE63190.1| single-strand DNA-binding protein [Yersinia pestis Z176003]
gi|320013811|gb|ADV97382.1| Single-stranded DNA-binding protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342852825|gb|AEL71378.1| single-stranded DNA-binding protein [Yersinia pestis A1122]
gi|391501439|gb|EIR55844.1| single-stranded DNA-binding family protein [Yersinia pestis PY-14]
gi|391592121|gb|EIS36598.1| single-stranded DNA-binding family protein [Yersinia pestis PY-54]
gi|411178074|gb|EKS48086.1| single-stranded DNA-binding protein [Yersinia pestis INS]
Length = 182
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWQDQ-SGQERYTTEVVVNVGGTMQML 113
>gi|17233435|ref|NP_490554.1| single-strand DNA binding protein [Salmonella typhimurium LT2]
gi|167994805|ref|ZP_02575896.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261888748|ref|YP_003264437.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|305696900|ref|YP_003864215.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|378448101|ref|YP_005235593.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378987357|ref|YP_005250512.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378991900|ref|YP_005255063.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379699143|ref|YP_005245613.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383499214|ref|YP_005412562.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386730698|ref|YP_006203674.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|410652117|ref|YP_006955236.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|410652258|ref|YP_006955376.1| SsB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|410654644|ref|YP_006955606.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|422028907|ref|ZP_16375198.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422033965|ref|ZP_16380018.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427558538|ref|ZP_18930526.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427578499|ref|ZP_18935448.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427599989|ref|ZP_18940271.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427622855|ref|ZP_18944951.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427646905|ref|ZP_18949806.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427658948|ref|ZP_18954545.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427664182|ref|ZP_18959408.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427682743|ref|ZP_18964319.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427802428|ref|ZP_18969817.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|37999751|sp|Q93GP7.1|SSB2_SALTY RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2;
AltName: Full=Helix-destabilizing protein 2
gi|16445256|gb|AAL23474.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205327384|gb|EDZ14148.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261857336|emb|CBA11409.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|267990100|gb|ACY86497.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|304376202|dbj|BAJ15364.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|312915786|dbj|BAJ39759.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|323132985|gb|ADX20414.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332991441|gb|AEF10423.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|365818947|gb|AEX00738.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|365819088|gb|AEX00878.1| SsB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|374347589|dbj|BAL48727.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|380467499|gb|AFD61437.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381139540|emb|CCF76747.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|414010782|gb|EKS94774.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414011113|gb|EKS95086.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414011605|gb|EKS95553.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414024924|gb|EKT08277.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414025377|gb|EKT08706.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414028408|gb|EKT11597.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414039929|gb|EKT22578.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414040557|gb|EKT23167.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414045352|gb|EKT27760.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414053936|gb|EKT35902.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414058105|gb|EKT39811.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 172
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T R+ E TE WH
Sbjct: 5 GVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRVRQDGEMREHTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV V+ +L + ++L G+ +Y+EG L + + D +G + E+ + G + LG
Sbjct: 57 RVVVFG-KLAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVIVNVGGTMQMLG 114
Query: 200 K 200
+
Sbjct: 115 R 115
>gi|398353827|ref|YP_006399291.1| single-stranded DNA-binding protein [Sinorhizobium fredii USDA 257]
gi|390129153|gb|AFL52534.1| single-stranded DNA-binding protein [Sinorhizobium fredii USDA 257]
Length = 170
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E TE WH
Sbjct: 5 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHN 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R E+ ++
Sbjct: 57 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYTTEVVLQ 105
>gi|419352847|ref|ZP_13894147.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC13C]
gi|419363171|ref|ZP_13904367.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC13D]
gi|378195761|gb|EHX56254.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC13D]
gi|378211196|gb|EHX71538.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC13C]
Length = 175
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEIREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L G +Y+EG L + + D G+ R + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLG 113
>gi|294677342|ref|YP_003577957.1| single-stranded DNA-binding protein [Rhodobacter capsulatus SB
1003]
gi|294476162|gb|ADE85550.1| single-stranded DNA-binding protein-1 [Rhodobacter capsulatus SB
1003]
Length = 175
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K ILVG +G+ P + +G V + T +++ E + TE WH V+
Sbjct: 7 KVILVGNLGRDPEVRTFANGGKVCNLRIATSETWRDKQSGERKERTE--------WHSVA 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR-RNGRLVFL 198
++ E L + ++L GST+Y+EG LE + + D G R E+ +R G L L
Sbjct: 59 IFNEPLAKIAEQYLRKGSTVYIEGQLETRKWTDQ-QGQERYTTEVVLRPYTGNLTLL 114
>gi|225715432|gb|ACO13562.1| Single-stranded DNA-binding protein, mitochondrial precursor [Esox
lucius]
Length = 147
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 77 LDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENEN-PTEYANRCA 135
L+ I + L+G+VGQ PV ++++ VT+FS+ T + R E EN P + + +
Sbjct: 25 LEKSINRVQLLGRVGQDPVMRQVEGRNPVTIFSMATNEM---WRSGEVENSPADVSQKTT 81
Query: 136 VQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLE 169
WHRVS++ L V +++ GS + VEG L+
Sbjct: 82 --WHRVSIFKPGLRDVAYQYVKKGSRVLVEGKLD 113
>gi|167949714|ref|ZP_02536788.1| Single-strand binding protein [Endoriftia persephone
'Hot96_1+Hot96_2']
gi|345862683|ref|ZP_08814897.1| single-stranded DNA-binding protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345126025|gb|EGW55891.1| single-stranded DNA-binding protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 148
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K IL+G +G+ P + + SG VT ++ T ++ E + TE WH
Sbjct: 4 GINKVILIGNLGRDPETRYMPSGGAVTNVTVATSDSWKDKNTGEQQERTE--------WH 55
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVF 173
RV V+ RL + ++L GS +YVEG L+ + +
Sbjct: 56 RV-VFFNRLAEIAAEYLKKGSKVYVEGRLQTRKW 88
>gi|242238175|ref|YP_002986356.1| single-strand binding protein [Dickeya dadantii Ech703]
gi|242130232|gb|ACS84534.1| single-strand binding protein [Dickeya dadantii Ech703]
Length = 180
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K IL+G +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILLGHLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D +G R EI + G + +
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEIVVNVGGTMQMI 113
>gi|292489759|ref|YP_003532649.1| single-stranded DNA-binding protein [Erwinia amylovora CFBP1430]
gi|292898035|ref|YP_003537404.1| single-strand binding protein [Erwinia amylovora ATCC 49946]
gi|428786734|ref|ZP_19004212.1| Single-stranded DNA-binding protein [Erwinia amylovora ACW56400]
gi|291197883|emb|CBJ44983.1| single-strand binding protein [Erwinia amylovora ATCC 49946]
gi|291555196|emb|CBA23421.1| Single-stranded DNA-binding protein [Erwinia amylovora CFBP1430]
gi|426275003|gb|EKV52743.1| Single-stranded DNA-binding protein [Erwinia amylovora ACW56400]
Length = 183
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGETKEKTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L+ + + D G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGALQTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|160886220|ref|ZP_02067223.1| hypothetical protein BACOVA_04227 [Bacteroides ovatus ATCC 8483]
gi|156108105|gb|EDO09850.1| single-strand binding family protein [Bacteroides ovatus ATCC 8483]
Length = 183
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 78 DPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQ 137
D + + ILVG VGQ P K +G V F L T R N T+ R +
Sbjct: 24 DMSVNRVILVGNVGQDPRVKYFDTGSAVATFPLAT-----TDRGYTLANGTQIPERT--E 76
Query: 138 WHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAI 189
WH + V RL +V K++ G +Y+EG + + ++D +G +R I EI +
Sbjct: 77 WHNI-VASNRLAEIVDKYVHKGDKLYLEGKIRTRSYSDQ-SGAMRYITEIYV 126
>gi|345297479|ref|YP_004826837.1| single-strand binding protein [Enterobacter asburiae LF7a]
gi|345091416|gb|AEN63052.1| single-strand binding protein [Enterobacter asburiae LF7a]
Length = 174
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L + + D +G + EI + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGAEKYTTEIVVNVGGTMQML 113
>gi|422323485|ref|ZP_16404524.1| single-stranded DNA-binding protein, partial [Achromobacter
xylosoxidans C54]
gi|317401533|gb|EFV82163.1| single-stranded DNA-binding protein [Achromobacter xylosoxidans
C54]
Length = 166
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 15/131 (11%)
Query: 57 SPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIR 116
+ T+ +G Q++ +NG+ + K ILVG +G+ P + G + S+ T
Sbjct: 17 AATRGTGCQQQR-----DNGM-ASVNKVILVGNLGRDPEVRYSPDGAAICNMSIATTSTW 70
Query: 117 NNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDP 176
++ E TE WHRV +Y RL + ++L G ++Y+EG L+ + + D
Sbjct: 71 KDKASGERREETE--------WHRVVMY-NRLAEIAGEYLKKGRSVYIEGRLKTRKWQDK 121
Query: 177 ITGLVRRIREI 187
TG R EI
Sbjct: 122 DTGADRYSTEI 132
>gi|452964785|gb|EME69819.1| single-stranded DNA-binding protein [Magnetospirillum sp. SO-1]
Length = 166
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G+ P + + G + ++ T +R E + TE WHR
Sbjct: 5 VNKVILVGNLGRDPEVRTSQDGSKIVNLNIATSETWKDRGTGERKEKTE--------WHR 56
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL 198
V ++ L V ++L GS++Y+EG L+ + + D +G + EI I R G L L
Sbjct: 57 VVIFNPNLADVAERYLKKGSSVYIEGALQTRKWTDQ-SGQEKYTTEIVIGRFKGELTLL 114
>gi|334123068|ref|ZP_08497098.1| single-stranded DNA-binding protein [Enterobacter hormaechei ATCC
49162]
gi|333391184|gb|EGK62304.1| single-stranded DNA-binding protein [Enterobacter hormaechei ATCC
49162]
Length = 165
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + L SG V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYLPSGGAVCSVTLATSESWRDKATGELKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L + + D G+ + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-AGVEKYTTEVVVNVGGTMQML 113
>gi|397166059|ref|ZP_10489505.1| single-stranded DNA-binding protein [Enterobacter radicincitans DSM
16656]
gi|396092221|gb|EJI89785.1| single-stranded DNA-binding protein [Enterobacter radicincitans DSM
16656]
Length = 177
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + SG V +L T +++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKQTGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFL 198
RV ++ +L V ++L GS +Y+EG L + + D +G + E+ + G + L
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGTMQML 113
>gi|417599847|ref|ZP_12250462.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
gi|345346699|gb|EGW79021.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
Length = 175
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 15/131 (11%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V K+L G+ +Y+EG L + + D G+ + EI ++ G + LG
Sbjct: 57 RVVLFG-KLAEVAGKYLRKGAQVYIEGQLRTRSWED--NGITCYVTEILVKTTGTVQMLG 113
Query: 200 KG----GDAQP 206
+ AQP
Sbjct: 114 RAPQQNAQAQP 124
>gi|440226631|ref|YP_007333722.1| single-stranded DNA-binding protein [Rhizobium tropici CIAT 899]
gi|440038142|gb|AGB71176.1| single-stranded DNA-binding protein [Rhizobium tropici CIAT 899]
Length = 191
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K ILVG +G P ++ + GR + ++ T +R E + TE WHR
Sbjct: 13 VNKVILVGNLGADPEIRRTQDGRPIANLNIATSETWRDRNSGERKEKTE--------WHR 64
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFND 175
V ++ E L V ++L G+ +Y+EG L+ + + D
Sbjct: 65 VVIFNEGLCKVAEQYLKKGAKVYIEGALQTRKWQD 99
>gi|240850766|ref|YP_002972166.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267889|gb|ACS51477.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 168
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G +G P ++L SG V + T +R E + TE WH +
Sbjct: 7 KVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTE--------WHNIV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRR-NGRLVFL--- 198
++ E L V ++L GS IY+EG L+ + + D G R E+ +++ G L L
Sbjct: 59 IFNENLVKVAEQYLKKGSKIYIEGQLQTRKWQDQ-NGNDRYTTEVVLQKYRGELQMLDGR 117
Query: 199 GKGGDAQPPSPSEVRGAGY 217
G G Q S G+
Sbjct: 118 GAAGGEQGASQGGSYSGGF 136
>gi|159184791|ref|NP_354518.2| single-strand DNA binding protein [Agrobacterium fabrum str. C58]
gi|37999448|sp|Q8UF87.2|SSB_AGRT5 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|159140079|gb|AAK87303.2| single-strand DNA binding protein [Agrobacterium fabrum str. C58]
Length = 173
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 83 KAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVS 142
K IL+G VG P ++ + GR + + T +R E + TE WH V
Sbjct: 7 KVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHTVV 58
Query: 143 VYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 59 VFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 105
>gi|365846177|ref|ZP_09386682.1| single-strand binding family protein [Yokenella regensburgei ATCC
43003]
gi|364574289|gb|EHM51754.1| single-strand binding family protein [Yokenella regensburgei ATCC
43003]
Length = 174
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
G+ K ILVG +GQ P + + +G V +L T ++ E + TE WH
Sbjct: 5 GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V ++L GS +Y+EG L + + D +G + EI + G + LG
Sbjct: 57 RVVLFG-KLAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEIVVNVGGTMQMLG 114
>gi|417860060|ref|ZP_12505116.1| single-strand DNA-binding protein [Agrobacterium tumefaciens F2]
gi|338823124|gb|EGP57092.1| single-strand DNA-binding protein [Agrobacterium tumefaciens F2]
Length = 199
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 81 IFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHR 140
+ K IL+G VG P ++ + GR + + T +R E + TE WH
Sbjct: 26 VNKVILIGNVGADPEIRRTQDGRPIANLRIATSESWRDRNSGERKEKTE--------WHT 77
Query: 141 VSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIR 190
V V+ E L VV +++ G+ +Y+EG L+ + + D TG R EI ++
Sbjct: 78 VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQ 126
>gi|432867524|ref|ZP_20089207.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE147]
gi|431412031|gb|ELG95121.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE147]
Length = 179
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 11/126 (8%)
Query: 80 GIFKAILVGQVGQSPVQKKLKSGRTVTLFSLGTGGIRNNRRPLENENPTEYANRCAVQWH 139
GI K ILVG++G+ P + + +G V + T +++ E TE WH
Sbjct: 5 GINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTGEMREQTE--------WH 56
Query: 140 RVSVYPERLGGVVMKHLVPGSTIYVEGNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLG 199
RV ++ +L V + L G+ +Y+EG L + + D G+ R + EI ++ G + L
Sbjct: 57 RVVLFG-KLAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGTMQMLV 113
Query: 200 KGGDAQ 205
+ AQ
Sbjct: 114 RAAGAQ 119
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,783,937,161
Number of Sequences: 23463169
Number of extensions: 170031794
Number of successful extensions: 400837
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 2146
Number of HSP's that attempted gapping in prelim test: 399277
Number of HSP's gapped (non-prelim): 2515
length of query: 218
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 81
effective length of database: 9,144,741,214
effective search space: 740724038334
effective search space used: 740724038334
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)