Query 027821
Match_columns 218
No_of_seqs 154 out of 1324
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 15:42:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027821.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027821hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0546 Gph Predicted phosphat 100.0 3.4E-27 7.4E-32 198.5 17.1 169 40-217 39-217 (220)
2 PRK13288 pyrophosphatase PpaX; 99.9 3E-25 6.6E-30 184.8 18.9 165 39-217 38-210 (214)
3 TIGR01422 phosphonatase phosph 99.9 3.7E-25 8.1E-30 189.0 18.5 146 61-217 75-252 (253)
4 TIGR01454 AHBA_synth_RP 3-amin 99.9 8.1E-25 1.7E-29 181.2 19.2 183 14-217 13-203 (205)
5 TIGR01449 PGP_bact 2-phosphogl 99.9 7.4E-25 1.6E-29 181.5 18.9 145 62-217 62-213 (213)
6 PLN02770 haloacid dehalogenase 99.9 1.5E-24 3.2E-29 185.6 19.0 164 39-214 60-232 (248)
7 PRK13226 phosphoglycolate phos 99.9 2.1E-24 4.5E-29 182.4 18.7 166 41-217 48-224 (229)
8 PRK13225 phosphoglycolate phos 99.9 5.6E-24 1.2E-28 184.9 20.3 165 41-217 98-267 (273)
9 TIGR03351 PhnX-like phosphonat 99.9 2.1E-23 4.6E-28 174.1 18.8 169 39-217 35-219 (220)
10 PRK13478 phosphonoacetaldehyde 99.9 1.7E-23 3.8E-28 180.4 18.8 145 62-217 78-254 (267)
11 PLN03243 haloacid dehalogenase 99.9 3.6E-23 7.8E-28 178.7 18.8 166 38-217 58-234 (260)
12 PRK13223 phosphoglycolate phos 99.9 1.3E-22 2.8E-27 176.0 19.6 146 60-217 77-229 (272)
13 PLN02575 haloacid dehalogenase 99.9 3.5E-22 7.5E-27 180.3 19.5 164 38-215 165-339 (381)
14 PRK13222 phosphoglycolate phos 99.9 6.2E-22 1.3E-26 165.2 17.7 147 60-217 68-221 (226)
15 PRK10826 2-deoxyglucose-6-phos 99.9 1.1E-21 2.4E-26 164.4 17.0 138 67-216 74-218 (222)
16 PRK11587 putative phosphatase; 99.9 1.3E-20 2.9E-25 157.6 16.2 119 85-214 79-204 (218)
17 TIGR02253 CTE7 HAD superfamily 99.9 4.1E-21 9E-26 160.0 12.4 123 86-214 91-221 (221)
18 PRK10563 6-phosphogluconate ph 99.8 1.6E-20 3.6E-25 156.9 13.1 165 38-216 37-211 (221)
19 PRK09449 dUMP phosphatase; Pro 99.8 8.8E-21 1.9E-25 158.7 11.3 124 85-218 91-223 (224)
20 PLN02940 riboflavin kinase 99.8 5.7E-20 1.2E-24 166.7 16.6 135 67-215 76-218 (382)
21 PRK06698 bifunctional 5'-methy 99.8 5.7E-20 1.2E-24 170.1 16.9 120 87-217 328-453 (459)
22 PLN02811 hydrolase 99.8 3E-20 6.5E-25 155.8 13.5 120 86-214 75-207 (220)
23 PRK06769 hypothetical protein; 99.8 5.4E-21 1.2E-25 155.5 8.6 124 87-217 26-171 (173)
24 TIGR02254 YjjG/YfnB HAD superf 99.8 4.3E-20 9.3E-25 153.6 13.1 120 87-216 95-223 (224)
25 TIGR00213 GmhB_yaeD D,D-heptos 99.8 4.3E-20 9.3E-25 150.2 10.9 119 87-215 24-176 (176)
26 PHA02597 30.2 hypothetical pro 99.8 1.5E-19 3.2E-24 148.7 12.8 158 37-214 28-195 (197)
27 PRK14988 GMP/IMP nucleotidase; 99.8 1.5E-19 3.3E-24 152.5 12.6 123 86-216 90-220 (224)
28 PLN02779 haloacid dehalogenase 99.8 1.6E-19 3.5E-24 157.8 12.9 119 88-215 143-270 (286)
29 PRK10725 fructose-1-P/6-phosph 99.8 1.1E-18 2.3E-23 142.0 13.2 96 86-187 85-186 (188)
30 PRK08942 D,D-heptose 1,7-bisph 99.8 7.2E-19 1.6E-23 143.4 11.7 123 87-217 27-176 (181)
31 TIGR02009 PGMB-YQAB-SF beta-ph 99.8 1.2E-18 2.7E-23 141.0 12.8 118 59-186 61-185 (185)
32 PLN02919 haloacid dehalogenase 99.8 3.6E-18 7.7E-23 171.6 18.5 118 89-214 161-286 (1057)
33 TIGR01990 bPGM beta-phosphoglu 99.8 1.5E-18 3.3E-23 140.4 12.9 118 61-187 61-185 (185)
34 PRK10748 flavin mononucleotide 99.8 2.1E-18 4.6E-23 146.5 14.0 121 86-216 110-237 (238)
35 COG0637 Predicted phosphatase/ 99.8 2.6E-18 5.7E-23 144.9 14.0 124 85-215 82-214 (221)
36 TIGR01428 HAD_type_II 2-haloal 99.8 9.1E-18 2E-22 138.0 13.3 97 88-189 91-194 (198)
37 TIGR01685 MDP-1 magnesium-depe 99.8 3E-18 6.6E-23 139.8 8.4 107 85-196 41-166 (174)
38 PRK09456 ?-D-glucose-1-phospha 99.7 1.7E-17 3.8E-22 137.0 11.7 105 89-197 84-195 (199)
39 TIGR02247 HAD-1A3-hyp Epoxide 99.7 8.7E-18 1.9E-22 139.5 8.7 106 87-197 92-206 (211)
40 PF13419 HAD_2: Haloacid dehal 99.7 2.4E-17 5.1E-22 130.3 10.6 96 86-186 74-176 (176)
41 TIGR01993 Pyr-5-nucltdase pyri 99.7 2.4E-17 5.2E-22 134.2 9.8 95 87-186 82-184 (184)
42 TIGR02252 DREG-2 REG-2-like, H 99.7 2.9E-17 6.3E-22 135.4 10.3 109 64-184 86-202 (203)
43 TIGR01509 HAD-SF-IA-v3 haloaci 99.7 5.9E-17 1.3E-21 130.4 11.7 93 88-186 84-183 (183)
44 TIGR01261 hisB_Nterm histidino 99.7 2.8E-17 6E-22 132.6 8.7 101 85-192 25-152 (161)
45 TIGR01672 AphA HAD superfamily 99.7 7.6E-17 1.6E-21 137.5 10.9 110 71-194 100-218 (237)
46 TIGR01691 enolase-ppase 2,3-di 99.7 2.4E-16 5.1E-21 133.2 12.9 117 66-192 76-201 (220)
47 TIGR01656 Histidinol-ppas hist 99.7 2.2E-16 4.7E-21 124.9 8.3 97 88-189 26-147 (147)
48 TIGR01548 HAD-SF-IA-hyp1 haloa 99.7 8.7E-16 1.9E-20 126.5 10.9 85 89-175 106-196 (197)
49 TIGR01668 YqeG_hyp_ppase HAD s 99.6 8.6E-16 1.9E-20 124.6 8.8 100 88-197 42-146 (170)
50 PRK11009 aphA acid phosphatase 99.6 2.2E-15 4.8E-20 128.5 11.3 108 71-194 100-218 (237)
51 PLN02954 phosphoserine phospha 99.6 8.6E-15 1.9E-19 122.4 14.5 120 88-217 83-223 (224)
52 TIGR01662 HAD-SF-IIIA HAD-supe 99.6 1.6E-15 3.5E-20 117.2 9.0 95 88-187 24-131 (132)
53 COG1011 Predicted hydrolase (H 99.6 3.2E-15 6.9E-20 124.7 11.3 123 87-217 97-226 (229)
54 PHA02530 pseT polynucleotide k 99.6 9.6E-16 2.1E-20 133.9 8.1 98 88-190 186-299 (300)
55 TIGR01452 PGP_euk phosphoglyco 99.6 1.4E-16 3E-21 138.5 2.2 119 89-213 143-279 (279)
56 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.6 2.1E-16 4.5E-21 136.2 3.1 123 90-217 121-254 (257)
57 TIGR01549 HAD-SF-IA-v1 haloaci 99.6 1.3E-14 2.9E-19 114.4 12.2 88 86-180 61-154 (154)
58 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 6.6E-15 1.4E-19 119.2 7.8 88 90-184 43-159 (166)
59 TIGR01493 HAD-SF-IA-v2 Haloaci 99.5 1E-14 2.2E-19 117.4 5.5 83 87-175 88-174 (175)
60 PRK05446 imidazole glycerol-ph 99.5 9.2E-14 2E-18 124.8 12.1 98 85-189 26-150 (354)
61 PF13242 Hydrolase_like: HAD-h 99.5 2.7E-14 5.9E-19 100.6 5.9 72 138-213 3-75 (75)
62 TIGR00338 serB phosphoserine p 99.5 1.2E-13 2.6E-18 115.1 9.8 118 87-217 83-219 (219)
63 smart00577 CPDc catalytic doma 99.5 2.8E-14 6E-19 113.2 5.4 91 87-183 43-138 (148)
64 TIGR01681 HAD-SF-IIIC HAD-supe 99.5 3.5E-14 7.5E-19 110.1 5.6 83 89-172 29-124 (128)
65 PLN02645 phosphoglycolate phos 99.5 1.9E-14 4.1E-19 127.2 4.6 112 102-218 186-308 (311)
66 PRK13582 thrH phosphoserine ph 99.5 1.2E-13 2.6E-18 113.9 8.8 115 86-217 65-195 (205)
67 KOG2914 Predicted haloacid-hal 99.5 4.4E-13 9.6E-18 113.2 12.3 122 85-215 88-220 (222)
68 cd01427 HAD_like Haloacid deha 99.4 7.4E-13 1.6E-17 99.8 9.3 95 87-186 22-139 (139)
69 PRK09552 mtnX 2-hydroxy-3-keto 99.4 1.2E-12 2.6E-17 109.8 9.8 120 87-217 72-212 (219)
70 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.4 4.3E-12 9.3E-17 108.8 13.1 72 138-213 177-249 (249)
71 TIGR01670 YrbI-phosphatas 3-de 99.4 1.1E-12 2.4E-17 104.7 8.0 100 95-211 37-136 (154)
72 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.4 1.1E-12 2.5E-17 107.2 7.5 97 86-187 77-190 (201)
73 PRK09484 3-deoxy-D-manno-octul 99.4 3.5E-12 7.5E-17 104.6 9.9 102 98-216 60-167 (183)
74 TIGR02726 phenyl_P_delta pheny 99.3 2E-12 4.4E-17 105.1 6.8 96 96-208 44-139 (169)
75 TIGR01489 DKMTPPase-SF 2,3-dik 99.3 9.8E-12 2.1E-16 100.4 8.8 88 88-183 71-185 (188)
76 TIGR01663 PNK-3'Pase polynucle 99.2 3.7E-11 8E-16 112.9 9.4 85 90-181 198-305 (526)
77 COG0241 HisB Histidinol phosph 99.2 9.4E-11 2E-15 96.0 10.3 118 87-214 29-173 (181)
78 PRK11133 serB phosphoserine ph 99.2 6.2E-11 1.3E-15 105.5 9.6 110 86-208 178-304 (322)
79 PRK10444 UMP phosphatase; Prov 99.2 4E-11 8.8E-16 103.0 8.1 73 138-214 173-246 (248)
80 TIGR01525 ATPase-IB_hvy heavy 99.2 4.8E-11 1E-15 113.2 9.3 110 88-216 383-498 (556)
81 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 4.8E-12 1E-16 107.8 2.0 93 90-188 139-242 (242)
82 TIGR03333 salvage_mtnX 2-hydro 99.2 1.2E-10 2.6E-15 97.3 9.9 121 88-218 69-209 (214)
83 TIGR01512 ATPase-IB2_Cd heavy 99.2 8.7E-11 1.9E-15 111.0 10.1 113 87-217 360-478 (536)
84 KOG3085 Predicted hydrolase (H 99.2 3.5E-11 7.6E-16 102.4 6.3 98 87-190 111-216 (237)
85 TIGR01686 FkbH FkbH-like domai 99.2 5.8E-11 1.3E-15 105.3 7.2 85 89-175 31-121 (320)
86 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.2 2.3E-10 4.9E-15 94.0 10.1 112 59-184 66-195 (202)
87 PF00702 Hydrolase: haloacid d 99.1 2.2E-10 4.8E-15 94.0 6.6 85 88-180 126-215 (215)
88 TIGR01544 HAD-SF-IE haloacid d 99.1 1.4E-08 3.1E-13 88.4 17.3 85 87-172 119-227 (277)
89 TIGR02137 HSK-PSP phosphoserin 99.0 2.3E-09 5E-14 89.5 10.9 114 88-216 67-194 (203)
90 TIGR01511 ATPase-IB1_Cu copper 99.0 2E-09 4.3E-14 102.4 10.9 108 88-216 404-517 (562)
91 TIGR02244 HAD-IG-Ncltidse HAD 99.0 1.3E-09 2.8E-14 97.6 9.0 96 88-188 183-324 (343)
92 KOG3109 Haloacid dehalogenase- 99.0 7.1E-09 1.5E-13 86.7 11.5 96 88-188 99-206 (244)
93 TIGR01488 HAD-SF-IB Haloacid D 99.0 2.8E-09 6E-14 85.4 8.2 87 87-175 71-176 (177)
94 PRK10671 copA copper exporting 98.9 3.5E-09 7.6E-14 104.9 8.8 113 88-217 649-764 (834)
95 PRK08238 hypothetical protein; 98.9 1.6E-08 3.5E-13 94.5 12.0 108 88-210 71-187 (479)
96 COG2179 Predicted hydrolase of 98.8 1.3E-08 2.8E-13 81.9 7.9 87 91-187 48-138 (175)
97 TIGR02251 HIF-SF_euk Dullard-l 98.8 1E-08 2.3E-13 82.6 5.1 94 88-187 41-139 (162)
98 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.8 2E-08 4.4E-13 85.5 7.1 87 86-175 21-113 (242)
99 PF12689 Acid_PPase: Acid Phos 98.7 7.6E-08 1.6E-12 78.3 8.6 103 84-192 40-156 (169)
100 COG0647 NagD Predicted sugar p 98.7 1.7E-07 3.6E-12 81.5 10.5 76 138-217 189-265 (269)
101 TIGR01522 ATPase-IIA2_Ca golgi 98.6 1.9E-07 4E-12 93.3 9.8 115 88-217 527-670 (884)
102 PRK11590 hypothetical protein; 98.6 1.1E-06 2.3E-11 73.4 12.9 113 59-186 73-201 (211)
103 PRK11033 zntA zinc/cadmium/mer 98.5 2.9E-07 6.3E-12 90.3 9.2 110 88-216 567-679 (741)
104 PRK10530 pyridoxal phosphate ( 98.5 3.2E-07 6.8E-12 78.6 8.3 110 90-211 138-259 (272)
105 PF08645 PNK3P: Polynucleotide 98.5 2E-07 4.4E-12 75.0 6.5 88 90-184 30-153 (159)
106 TIGR01456 CECR5 HAD-superfamil 98.5 1.7E-07 3.7E-12 83.3 5.9 75 138-217 232-320 (321)
107 COG0560 SerB Phosphoserine pho 98.5 1.5E-06 3.4E-11 73.0 10.3 92 88-184 76-184 (212)
108 TIGR01533 lipo_e_P4 5'-nucleot 98.4 1.3E-06 2.8E-11 75.9 9.8 81 87-172 116-204 (266)
109 TIGR01545 YfhB_g-proteo haloac 98.4 4E-06 8.7E-11 70.3 11.9 110 59-182 72-197 (210)
110 PTZ00445 p36-lilke protein; Pr 98.4 8E-07 1.7E-11 74.4 6.4 93 90-187 76-205 (219)
111 TIGR01460 HAD-SF-IIA Haloacid 98.4 4.7E-07 1E-11 77.0 5.0 85 100-189 142-236 (236)
112 TIGR02250 FCP1_euk FCP1-like p 98.2 3.2E-06 6.9E-11 67.9 6.7 83 86-172 55-143 (156)
113 KOG2882 p-Nitrophenyl phosphat 98.1 4.7E-06 1E-10 72.9 6.4 75 138-216 223-302 (306)
114 TIGR01116 ATPase-IIA1_Ca sarco 98.1 1.4E-05 3E-10 80.3 10.4 113 88-216 536-681 (917)
115 COG4229 Predicted enolase-phos 98.0 3.1E-05 6.8E-10 63.5 8.3 96 88-187 102-204 (229)
116 PF06888 Put_Phosphatase: Puta 98.0 0.00023 4.9E-09 60.9 13.9 109 86-198 68-208 (234)
117 PF12710 HAD: haloacid dehalog 98.0 1.2E-05 2.6E-10 64.9 5.7 77 92-172 92-191 (192)
118 TIGR01684 viral_ppase viral ph 98.0 1.1E-05 2.4E-10 70.8 5.5 53 92-145 149-208 (301)
119 COG4087 Soluble P-type ATPase 98.0 3E-05 6.6E-10 60.3 7.1 117 85-217 26-146 (152)
120 PLN02645 phosphoglycolate phos 97.9 6.6E-05 1.4E-09 66.4 9.2 88 88-185 43-136 (311)
121 KOG1615 Phosphoserine phosphat 97.7 0.00015 3.2E-09 60.1 7.7 84 87-174 86-190 (227)
122 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00016 3.4E-09 60.2 7.8 78 101-184 137-219 (221)
123 PHA03398 viral phosphatase sup 97.7 7.3E-05 1.6E-09 65.8 5.4 46 91-137 150-198 (303)
124 COG4996 Predicted phosphatase 97.7 0.00017 3.6E-09 56.3 6.7 96 86-184 38-142 (164)
125 PF09419 PGP_phosphatase: Mito 97.6 0.00044 9.6E-09 56.2 8.6 94 88-190 58-167 (168)
126 TIGR01487 SPP-like sucrose-pho 97.6 0.00028 6.1E-09 58.6 7.6 95 103-209 108-205 (215)
127 PRK01158 phosphoglycolate phos 97.5 0.00039 8.5E-09 58.0 8.1 92 104-209 117-215 (230)
128 TIGR00685 T6PP trehalose-phosp 97.4 0.00018 4E-09 61.3 4.6 67 140-218 167-240 (244)
129 PF05761 5_nucleotid: 5' nucle 97.4 0.00037 8E-09 64.9 6.6 95 90-187 184-324 (448)
130 PRK00192 mannosyl-3-phosphogly 97.4 0.00036 7.8E-09 60.3 6.1 78 100-184 146-231 (273)
131 KOG3040 Predicted sugar phosph 97.3 0.00017 3.7E-09 60.4 3.4 75 138-217 180-256 (262)
132 COG1778 Low specificity phosph 97.3 0.00026 5.7E-09 56.7 4.2 84 91-184 39-123 (170)
133 TIGR01482 SPP-subfamily Sucros 97.3 0.0013 2.9E-08 54.5 8.4 92 104-209 109-207 (225)
134 TIGR01485 SPP_plant-cyano sucr 97.2 0.002 4.3E-08 54.8 8.7 81 100-187 117-210 (249)
135 TIGR02471 sucr_syn_bact_C sucr 97.1 0.0045 9.7E-08 52.2 9.6 98 101-209 111-221 (236)
136 TIGR01497 kdpB K+-transporting 97.0 0.0041 8.8E-08 60.8 9.9 92 88-195 445-540 (675)
137 COG3700 AphA Acid phosphatase 97.0 0.0014 3.1E-08 53.7 5.8 98 81-187 106-211 (237)
138 COG4359 Uncharacterized conser 97.0 0.0031 6.7E-08 52.0 7.2 83 87-175 71-177 (220)
139 KOG3120 Predicted haloacid deh 97.0 0.0011 2.4E-08 56.0 4.4 104 87-194 82-217 (256)
140 PF06941 NT5C: 5' nucleotidase 96.9 0.0021 4.6E-08 52.7 5.7 106 85-216 69-184 (191)
141 PRK01122 potassium-transportin 96.7 0.012 2.5E-07 57.7 9.9 107 88-214 444-556 (679)
142 COG2217 ZntA Cation transport 96.6 0.011 2.3E-07 58.1 8.8 111 88-215 536-649 (713)
143 PRK14010 potassium-transportin 96.5 0.018 4E-07 56.3 9.6 107 88-214 440-552 (673)
144 PF13344 Hydrolase_6: Haloacid 96.2 0.013 2.7E-07 43.5 5.7 83 87-181 12-100 (101)
145 TIGR01517 ATPase-IIB_Ca plasma 96.2 0.044 9.6E-07 55.6 11.3 111 88-214 578-718 (941)
146 TIGR01675 plant-AP plant acid 96.2 0.032 6.8E-07 47.6 8.4 81 87-172 118-212 (229)
147 TIGR00099 Cof-subfamily Cof su 96.1 0.043 9.2E-07 46.6 9.1 61 140-211 188-248 (256)
148 KOG0207 Cation transport ATPas 96.0 0.04 8.7E-07 54.9 9.5 110 88-215 722-835 (951)
149 TIGR01523 ATPase-IID_K-Na pota 96.0 0.045 9.7E-07 56.2 9.8 112 88-214 645-795 (1053)
150 TIGR01524 ATPase-IIIB_Mg magne 95.9 0.073 1.6E-06 53.6 10.9 85 88-182 514-624 (867)
151 PRK15122 magnesium-transportin 95.9 0.054 1.2E-06 54.7 10.0 110 88-214 549-686 (903)
152 PRK10517 magnesium-transportin 95.8 0.045 9.9E-07 55.3 9.1 103 88-207 549-677 (902)
153 TIGR01452 PGP_euk phosphoglyco 95.8 0.061 1.3E-06 46.6 8.8 87 87-184 16-108 (279)
154 TIGR01484 HAD-SF-IIB HAD-super 95.8 0.0096 2.1E-07 48.7 3.6 41 140-184 163-203 (204)
155 TIGR01647 ATPase-IIIA_H plasma 95.8 0.062 1.4E-06 53.3 9.8 86 88-182 441-556 (755)
156 smart00775 LNS2 LNS2 domain. T 95.8 0.12 2.5E-06 41.3 9.6 89 89-182 27-141 (157)
157 TIGR01106 ATPase-IIC_X-K sodiu 95.8 0.083 1.8E-06 54.0 10.7 39 88-127 567-608 (997)
158 PF03031 NIF: NLI interacting 95.6 0.0037 8.1E-08 49.4 0.4 82 88-172 35-122 (159)
159 PRK10513 sugar phosphate phosp 95.6 0.021 4.6E-07 48.8 4.9 59 140-209 196-254 (270)
160 TIGR01486 HAD-SF-IIB-MPGP mann 95.4 0.086 1.9E-06 44.9 8.1 63 140-209 176-242 (256)
161 PRK10976 putative hydrolase; P 95.3 0.028 6E-07 48.0 4.7 61 140-209 190-250 (266)
162 COG0647 NagD Predicted sugar p 94.7 0.099 2.1E-06 45.6 6.6 52 86-137 21-78 (269)
163 PLN02887 hydrolase family prot 94.4 0.2 4.4E-06 48.3 8.6 59 140-209 507-565 (580)
164 PRK15126 thiamin pyrimidine py 94.3 0.13 2.9E-06 44.1 6.5 53 140-199 188-240 (272)
165 TIGR01652 ATPase-Plipid phosph 94.1 0.24 5.2E-06 51.0 8.9 39 88-127 630-671 (1057)
166 TIGR01494 ATPase_P-type ATPase 93.6 0.28 6.1E-06 46.0 7.8 79 88-182 346-428 (499)
167 PF03767 Acid_phosphat_B: HAD 93.5 0.046 9.9E-07 46.5 2.1 80 88-172 114-208 (229)
168 COG0474 MgtA Cation transport 93.5 0.36 7.9E-06 49.0 8.8 90 88-186 546-664 (917)
169 PF11019 DUF2608: Protein of u 93.5 0.71 1.5E-05 39.8 9.5 96 91-190 83-212 (252)
170 TIGR02461 osmo_MPG_phos mannos 93.5 0.11 2.4E-06 43.8 4.3 41 140-184 181-223 (225)
171 COG2503 Predicted secreted aci 93.4 0.45 9.8E-06 41.0 7.8 81 87-172 120-209 (274)
172 PF08282 Hydrolase_3: haloacid 93.3 0.18 3.9E-06 41.4 5.4 62 140-212 186-247 (254)
173 KOG2630 Enolase-phosphatase E- 93.3 0.61 1.3E-05 39.9 8.4 94 87-187 121-224 (254)
174 PRK03669 mannosyl-3-phosphogly 93.2 0.12 2.6E-06 44.5 4.3 66 140-210 187-255 (271)
175 PRK10187 trehalose-6-phosphate 92.8 0.25 5.3E-06 42.8 5.6 65 140-218 174-241 (266)
176 PRK00192 mannosyl-3-phosphogly 92.4 0.24 5.3E-06 42.6 5.0 43 89-132 21-66 (273)
177 TIGR01680 Veg_Stor_Prot vegeta 92.2 1.1 2.5E-05 39.2 8.9 82 87-172 143-238 (275)
178 TIGR01458 HAD-SF-IIA-hyp3 HAD- 92.2 0.15 3.2E-06 43.8 3.4 46 90-136 22-73 (257)
179 TIGR01657 P-ATPase-V P-type AT 91.8 0.82 1.8E-05 47.1 8.7 39 88-127 655-696 (1054)
180 PLN03190 aminophospholipid tra 91.1 0.84 1.8E-05 47.6 8.1 38 88-126 725-765 (1178)
181 PF05822 UMPH-1: Pyrimidine 5' 90.8 2.1 4.5E-05 36.9 9.0 83 88-172 89-195 (246)
182 PLN02382 probable sucrose-phos 90.6 0.98 2.1E-05 41.7 7.3 51 140-196 175-228 (413)
183 COG4030 Uncharacterized protei 90.5 1.5 3.3E-05 37.6 7.7 38 88-126 82-121 (315)
184 PF05116 S6PP: Sucrose-6F-phos 90.3 0.68 1.5E-05 39.6 5.6 70 115-194 135-212 (247)
185 COG2216 KdpB High-affinity K+ 90.2 1.1 2.4E-05 42.6 7.3 101 89-208 447-559 (681)
186 TIGR02245 HAD_IIID1 HAD-superf 90.1 1.3 2.8E-05 36.9 6.9 91 89-184 45-153 (195)
187 PF06189 5-nucleotidase: 5'-nu 89.8 0.64 1.4E-05 40.4 5.0 80 100-192 184-263 (264)
188 KOG0202 Ca2+ transporting ATPa 89.7 1.7 3.6E-05 43.6 8.3 99 88-198 583-712 (972)
189 PRK10444 UMP phosphatase; Prov 88.1 0.58 1.3E-05 40.1 3.7 48 88-136 16-69 (248)
190 TIGR02461 osmo_MPG_phos mannos 87.5 1.1 2.4E-05 37.7 4.9 40 89-129 15-57 (225)
191 TIGR01658 EYA-cons_domain eyes 87.5 3.1 6.6E-05 36.1 7.5 81 103-189 176-259 (274)
192 KOG2469 IMP-GMP specific 5'-nu 87.2 1.3 2.9E-05 40.7 5.5 90 95-187 207-333 (424)
193 COG0561 Cof Predicted hydrolas 87.1 0.52 1.1E-05 40.1 2.8 40 140-183 189-228 (264)
194 PLN02177 glycerol-3-phosphate 87.1 8 0.00017 36.7 10.9 109 58-186 88-213 (497)
195 PF05152 DUF705: Protein of un 86.2 1.6 3.5E-05 38.5 5.3 47 90-137 143-192 (297)
196 TIGR02463 MPGP_rel mannosyl-3- 85.9 1.4 3E-05 36.4 4.6 34 93-127 20-56 (221)
197 PRK10513 sugar phosphate phosp 82.9 3.1 6.8E-05 35.3 5.7 44 90-134 21-67 (270)
198 KOG0323 TFIIF-interacting CTD 81.7 2.9 6.3E-05 40.8 5.4 84 87-172 199-286 (635)
199 PRK12702 mannosyl-3-phosphogly 79.9 2.8 6.1E-05 37.2 4.4 40 89-129 18-60 (302)
200 TIGR01486 HAD-SF-IIB-MPGP mann 79.7 3.7 8.1E-05 34.8 5.0 38 90-128 17-57 (256)
201 TIGR01460 HAD-SF-IIA Haloacid 79.6 4 8.7E-05 34.4 5.1 49 87-136 12-67 (236)
202 PRK14501 putative bifunctional 79.4 7.6 0.00016 38.4 7.7 64 140-217 657-720 (726)
203 COG3882 FkbH Predicted enzyme 79.1 6 0.00013 37.5 6.4 69 100-175 269-345 (574)
204 PRK01158 phosphoglycolate phos 78.3 3.6 7.8E-05 33.9 4.4 39 90-129 21-62 (230)
205 TIGR01487 SPP-like sucrose-pho 78.1 3.3 7.3E-05 34.0 4.2 40 89-129 18-60 (215)
206 COG5663 Uncharacterized conser 78.0 6.9 0.00015 32.1 5.7 92 90-193 73-167 (194)
207 KOG3128 Uncharacterized conser 76.8 11 0.00024 32.9 6.9 81 90-172 139-244 (298)
208 TIGR00099 Cof-subfamily Cof su 76.4 4.8 0.00011 33.9 4.7 38 90-128 17-57 (256)
209 TIGR02471 sucr_syn_bact_C sucr 75.6 6.5 0.00014 32.8 5.3 36 100-137 28-63 (236)
210 PRK10530 pyridoxal phosphate ( 75.4 5.4 0.00012 33.7 4.8 40 89-129 20-62 (272)
211 PRK15126 thiamin pyrimidine py 75.0 4.7 0.0001 34.4 4.3 39 90-129 20-61 (272)
212 KOG0206 P-type ATPase [General 74.6 36 0.00078 35.7 11.0 39 88-127 650-691 (1151)
213 cd04728 ThiG Thiazole synthase 74.3 46 0.001 28.8 10.1 95 88-192 103-209 (248)
214 PF08282 Hydrolase_3: haloacid 74.2 3.1 6.7E-05 34.0 2.9 37 90-127 16-55 (254)
215 COG4850 Uncharacterized conser 73.5 14 0.00031 33.3 7.0 81 87-170 194-292 (373)
216 KOG3107 Predicted haloacid deh 73.5 17 0.00038 33.4 7.6 81 100-187 368-451 (468)
217 PRK10976 putative hydrolase; P 71.9 6 0.00013 33.5 4.2 39 90-129 20-61 (266)
218 PRK00994 F420-dependent methyl 71.4 20 0.00043 31.0 7.0 80 100-187 29-116 (277)
219 TIGR01482 SPP-subfamily Sucros 71.2 6.8 0.00015 32.0 4.3 39 90-129 16-57 (225)
220 COG0561 Cof Predicted hydrolas 69.7 7.4 0.00016 32.9 4.3 38 90-128 21-61 (264)
221 KOG2961 Predicted hydrolase (H 69.4 52 0.0011 26.7 8.6 80 103-191 80-171 (190)
222 KOG2882 p-Nitrophenyl phosphat 69.0 7.4 0.00016 34.5 4.2 41 87-127 36-81 (306)
223 TIGR01485 SPP_plant-cyano sucr 68.3 9.3 0.0002 32.2 4.6 44 90-135 22-68 (249)
224 COG0761 lytB 4-Hydroxy-3-methy 67.9 12 0.00025 33.1 5.1 51 140-198 225-275 (294)
225 PLN02580 trehalose-phosphatase 67.8 7.9 0.00017 35.6 4.3 69 140-218 301-374 (384)
226 PRK03669 mannosyl-3-phosphogly 67.6 12 0.00026 32.0 5.2 36 91-127 26-64 (271)
227 KOG2134 Polynucleotide kinase 67.4 10 0.00023 34.9 4.9 91 89-184 104-230 (422)
228 PLN02423 phosphomannomutase 67.2 7.1 0.00015 33.2 3.7 39 140-187 189-231 (245)
229 PLN02499 glycerol-3-phosphate 64.6 30 0.00065 32.9 7.5 66 58-137 74-139 (498)
230 KOG0204 Calcium transporting A 63.5 63 0.0014 33.0 9.7 106 88-207 646-779 (1034)
231 PRK14502 bifunctional mannosyl 63.5 11 0.00024 37.2 4.6 42 140-185 613-656 (694)
232 PTZ00174 phosphomannomutase; P 62.9 12 0.00027 31.5 4.4 40 140-187 188-231 (247)
233 PRK00208 thiG thiazole synthas 61.6 1.1E+02 0.0023 26.6 10.1 95 88-192 103-209 (250)
234 COG0731 Fe-S oxidoreductases [ 60.1 24 0.00053 31.3 5.7 40 88-134 91-134 (296)
235 PRK12702 mannosyl-3-phosphogly 60.0 34 0.00073 30.5 6.6 74 106-185 152-251 (302)
236 TIGR01689 EcbF-BcbF capsule bi 57.6 22 0.00048 27.4 4.5 43 88-133 23-83 (126)
237 KOG2470 Similar to IMP-GMP spe 57.1 6.3 0.00014 36.0 1.6 85 100-187 254-375 (510)
238 PLN02205 alpha,alpha-trehalose 56.4 19 0.0004 36.6 4.9 70 140-218 762-842 (854)
239 TIGR00236 wecB UDP-N-acetylglu 56.3 95 0.0021 27.3 9.1 79 105-190 32-120 (365)
240 PF04028 DUF374: Domain of unk 53.8 73 0.0016 22.2 6.4 52 110-167 19-70 (74)
241 TIGR03609 S_layer_CsaB polysac 53.7 1.2E+02 0.0027 25.9 9.2 35 160-198 253-287 (298)
242 COG1927 Mtd Coenzyme F420-depe 52.6 88 0.0019 26.7 7.5 82 100-187 29-116 (277)
243 TIGR01484 HAD-SF-IIB HAD-super 52.4 19 0.00041 29.0 3.6 36 89-125 17-55 (204)
244 CHL00162 thiG thiamin biosynth 52.0 1.5E+02 0.0033 25.9 9.1 94 88-191 117-222 (267)
245 TIGR01456 CECR5 HAD-superfamil 51.4 14 0.0003 32.7 2.9 47 88-135 15-72 (321)
246 COG5610 Predicted hydrolase (H 51.1 59 0.0013 31.0 6.9 97 85-186 93-201 (635)
247 PF08235 LNS2: LNS2 (Lipin/Ned 50.0 1.1E+02 0.0024 24.5 7.6 88 89-182 27-141 (157)
248 KOG4549 Magnesium-dependent ph 47.9 94 0.002 24.4 6.5 40 87-127 42-85 (144)
249 KOG4094 Uncharacterized conser 47.4 13 0.00029 29.6 1.8 96 23-122 31-139 (178)
250 KOG0203 Na+/K+ ATPase, alpha s 46.7 96 0.0021 31.7 7.9 105 89-202 590-743 (1019)
251 PRK14502 bifunctional mannosyl 45.8 30 0.00065 34.3 4.4 38 90-128 434-474 (694)
252 COG2121 Uncharacterized protei 44.5 1.4E+02 0.003 25.2 7.5 77 104-190 70-156 (214)
253 PLN02887 hydrolase family prot 44.5 43 0.00094 32.5 5.2 38 90-128 326-366 (580)
254 PF04230 PS_pyruv_trans: Polys 43.0 1.4E+02 0.003 24.2 7.5 26 160-189 260-285 (286)
255 COG4502 5'(3')-deoxyribonucleo 42.0 1.2E+02 0.0025 24.4 6.3 72 85-172 64-143 (180)
256 PF10307 DUF2410: Hypothetical 41.9 1.9E+02 0.004 24.2 7.9 69 100-172 69-149 (197)
257 TIGR03679 arCOG00187 arCOG0018 41.6 1.6E+02 0.0035 24.5 7.7 78 113-198 45-130 (218)
258 TIGR02329 propionate_PrpR prop 41.5 1.3E+02 0.0029 28.7 8.0 78 100-189 95-172 (526)
259 TIGR03140 AhpF alkyl hydropero 39.7 1.2E+02 0.0027 28.5 7.5 101 85-187 125-242 (515)
260 PRK11840 bifunctional sulfur c 39.1 2.9E+02 0.0064 24.9 10.0 94 88-191 177-282 (326)
261 PRK10187 trehalose-6-phosphate 39.0 33 0.00072 29.5 3.2 37 89-126 36-76 (266)
262 PF03808 Glyco_tran_WecB: Glyc 38.8 90 0.002 24.9 5.6 35 157-192 49-86 (172)
263 PRK00087 4-hydroxy-3-methylbut 38.5 69 0.0015 31.4 5.7 50 141-198 220-269 (647)
264 KOG0741 AAA+-type ATPase [Post 37.8 2E+02 0.0043 28.2 8.3 50 100-153 637-686 (744)
265 TIGR00216 ispH_lytB (E)-4-hydr 35.5 96 0.0021 27.3 5.5 47 143-197 224-270 (280)
266 PRK12360 4-hydroxy-3-methylbut 34.2 94 0.002 27.3 5.3 48 142-197 224-271 (281)
267 KOG3040 Predicted sugar phosph 34.0 1.8E+02 0.004 24.9 6.7 48 88-136 22-75 (262)
268 PF02401 LYTB: LytB protein; 33.7 48 0.001 29.1 3.4 47 144-198 226-272 (281)
269 PTZ00174 phosphomannomutase; P 33.6 87 0.0019 26.3 4.9 33 90-122 23-58 (247)
270 PRK01045 ispH 4-hydroxy-3-meth 33.6 1.2E+02 0.0027 26.8 6.0 48 142-197 225-272 (298)
271 PRK10017 colanic acid biosynth 31.9 4.2E+02 0.0091 24.6 9.6 87 100-200 271-366 (426)
272 PF02350 Epimerase_2: UDP-N-ac 31.8 98 0.0021 27.7 5.2 83 102-189 8-100 (346)
273 cd01481 vWA_collagen_alpha3-VI 31.5 77 0.0017 25.0 4.0 34 170-207 127-160 (165)
274 cd07187 YvcK_like family of mo 30.0 4E+02 0.0087 23.7 9.5 83 89-187 194-287 (308)
275 PRK13762 tRNA-modifying enzyme 29.8 1.3E+02 0.0027 26.9 5.5 32 88-122 141-175 (322)
276 PF01993 MTD: methylene-5,6,7, 29.1 61 0.0013 28.1 3.1 81 100-187 28-115 (276)
277 PF05116 S6PP: Sucrose-6F-phos 28.5 73 0.0016 27.0 3.6 36 100-137 33-68 (247)
278 cd03030 GRX_SH3BGR Glutaredoxi 26.7 1.3E+02 0.0029 21.6 4.2 56 114-175 20-82 (92)
279 TIGR01826 CofD_related conserv 26.0 4.8E+02 0.01 23.3 9.9 84 89-187 191-285 (310)
280 PLN02151 trehalose-phosphatase 25.7 87 0.0019 28.5 3.7 69 140-218 269-342 (354)
281 cd01994 Alpha_ANH_like_IV This 25.6 3.7E+02 0.008 21.9 7.4 38 157-198 89-132 (194)
282 PF06506 PrpR_N: Propionate ca 25.4 1E+02 0.0023 24.5 3.8 87 90-190 59-153 (176)
283 PRK15424 propionate catabolism 24.9 3.2E+02 0.0069 26.3 7.5 76 100-187 105-180 (538)
284 KOG2832 TFIIF-interacting CTD 24.9 1.6E+02 0.0035 27.1 5.2 41 91-132 216-258 (393)
285 COG1184 GCD2 Translation initi 24.3 4.9E+02 0.011 23.2 8.1 60 106-169 122-183 (301)
286 PLN02580 trehalose-phosphatase 23.9 76 0.0017 29.2 3.0 35 88-122 140-176 (384)
287 PF06014 DUF910: Bacterial pro 23.4 55 0.0012 22.2 1.5 23 146-172 8-30 (62)
288 PRK00994 F420-dependent methyl 23.1 3.6E+02 0.0078 23.5 6.7 65 61-127 44-111 (277)
289 PF02593 dTMP_synthase: Thymid 22.3 95 0.0021 26.3 3.1 48 89-137 59-115 (217)
290 TIGR03568 NeuC_NnaA UDP-N-acet 22.0 5.7E+02 0.012 22.8 8.6 24 160-187 284-307 (365)
291 PLN03017 trehalose-phosphatase 21.9 1.4E+02 0.0031 27.3 4.3 68 141-218 284-356 (366)
292 PLN02151 trehalose-phosphatase 21.5 87 0.0019 28.5 2.9 35 88-122 119-155 (354)
293 KOG2456 Aldehyde dehydrogenase 21.4 2.3E+02 0.0051 26.6 5.5 15 160-175 217-231 (477)
294 PRK10076 pyruvate formate lyas 20.6 2.6E+02 0.0056 23.3 5.4 66 60-126 19-92 (213)
295 KOG3217 Protein tyrosine phosp 20.4 1.8E+02 0.0039 23.3 4.1 50 88-147 54-103 (159)
296 PF07085 DRTGG: DRTGG domain; 20.4 2E+02 0.0043 20.7 4.2 36 157-196 41-77 (105)
297 PF00389 2-Hacid_dh: D-isomer 20.3 2.1E+02 0.0045 21.4 4.4 85 92-192 9-94 (133)
No 1
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.95 E-value=3.4e-27 Score=198.48 Aligned_cols=169 Identities=25% Similarity=0.325 Sum_probs=136.0
Q ss_pred hHHHHHhhhc--cHHHHHHhcCCC-HHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCCh
Q 027821 40 VEGILENWSK--IKPVIMEDWSEN-RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQS 113 (218)
Q Consensus 40 ~~~~~~~~~G--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~ 113 (218)
..+.+..++| ....+.+..+.. .+...+..+.++++|.+...+.. ...+|||+.++|. ++|++++|||||++
T Consensus 39 ~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~ 116 (220)
T COG0546 39 DEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTAYAELL--ESRLFPGVKELLAALKSAGYKLGIVTNKPE 116 (220)
T ss_pred CHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhhc--cCccCCCHHHHHHHHHhCCCeEEEEeCCcH
Confidence 4555678888 444444433321 12112456666666655442221 3689999999999 89999999999999
Q ss_pred HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 114 RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 114 ~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
..++.+|++ +|+.+||+.++|.+ .||+|+++..++.+.+.++++++|||||.+|+++| ++ ||+++|+|+||
T Consensus 117 ~~~~~~l~~-~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA-~~---Ag~~~v~v~~g 191 (220)
T COG0546 117 RELDILLKA-LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAA-KA---AGVPAVGVTWG 191 (220)
T ss_pred HHHHHHHHH-hCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHH-HH---cCCCEEEEECC
Confidence 999999999 99999999999954 67999999999999988877999999999999999 99 99999999999
Q ss_pred CCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 190 YNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 190 ~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|++.+.+....++ ++++++.||...+
T Consensus 192 ~~~~~~l~~~~~d--~vi~~~~el~~~l 217 (220)
T COG0546 192 YNSREELAQAGAD--VVIDSLAELLALL 217 (220)
T ss_pred CCCCcchhhcCCC--EEECCHHHHHHHH
Confidence 9877778777777 9999999998775
No 2
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.94 E-value=3e-25 Score=184.83 Aligned_cols=165 Identities=15% Similarity=0.079 Sum_probs=134.0
Q ss_pred ChHHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChH
Q 027821 39 TVEGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSR 114 (218)
Q Consensus 39 ~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~ 114 (218)
+.++ +....| ........+ .++..+.....|+..+.+.. .....+|||+.++|+ ++|++++|+||+.+.
T Consensus 38 ~~~~-~~~~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~ 110 (214)
T PRK13288 38 KRED-VLPFIGPSLHDTFSKI--DESKVEEMITTYREFNHEHH----DELVTEYETVYETLKTLKKQGYKLGIVTTKMRD 110 (214)
T ss_pred CHHH-HHHHhCcCHHHHHHhc--CHHHHHHHHHHHHHHHHHhh----hhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 3444 445556 322223322 34445566666777664433 455789999999999 789999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 115 FADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 115 ~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
.+...|++ +|+..||+.|+|++ .||+|+++.+++.+.+.++.+++||||+.+|+++| ++ +|+++|+|.||+
T Consensus 111 ~~~~~l~~-~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa-~~---aG~~~i~v~~g~ 185 (214)
T PRK13288 111 TVEMGLKL-TGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAG-KN---AGTKTAGVAWTI 185 (214)
T ss_pred HHHHHHHH-cCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-HH---CCCeEEEEcCCC
Confidence 99999999 99999999999986 57999999999999998899999999999999999 99 999999999999
Q ss_pred CCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 191 NTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 191 ~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+.+++.++.++ ++++++.|+...+
T Consensus 186 ~~~~~l~~~~~~--~~i~~~~~l~~~i 210 (214)
T PRK13288 186 KGREYLEQYKPD--FMLDKMSDLLAIV 210 (214)
T ss_pred CCHHHHhhcCcC--EEECCHHHHHHHH
Confidence 888877766555 9999999998764
No 3
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.94 E-value=3.7e-25 Score=188.99 Aligned_cols=146 Identities=11% Similarity=0.016 Sum_probs=123.9
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-ceEEcC
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGL 136 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d~I~g~ 136 (218)
+.+.+.+....|+++|.+.. .....+|||+.++|+ ++|++++|+||+.++.++.+|++ +|+..+| |.|+|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~-~gl~~~f~d~ii~~ 149 (253)
T TIGR01422 75 TEADIEAIYEAFEPLQLAKL----AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPE-AALQGYRPDYNVTT 149 (253)
T ss_pred CHHHHHHHHHHHHHHHHHHH----HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHH-HHhcCCCCceEEcc
Confidence 34445566666776664433 456789999999999 78999999999999999999999 9999986 999888
Q ss_pred C----CCChHHHHHHHHhcCCCC-CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC-------------------
Q 027821 137 G----TGPKVEVLKQLQKKPELQ-GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT------------------- 192 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~------------------- 192 (218)
+ .||+|+++..++++.++. +.+|+|||||++|+++| ++ |||.+|+|.||+++
T Consensus 150 ~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA-~~---aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~ 225 (253)
T TIGR01422 150 DDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEG-RN---AGMWTVGLILSSNELGLSEEEYRALDPAELEAR 225 (253)
T ss_pred ccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHH-HH---CCCeEEEEecCCcccCCCHHHHHhCCHHHHHHH
Confidence 6 579999999999999874 88999999999999999 99 99999999999873
Q ss_pred ----HHHHHhccCCCCeEEcChhHHHhhc
Q 027821 193 ----QKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 193 ----~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+++..++|+ ++++++.|+...+
T Consensus 226 ~~~~~~~l~~~~~~--~v~~~~~el~~~~ 252 (253)
T TIGR01422 226 RAEATARLKAAGAH--YVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHhcCCC--EehhcHHHHHHhh
Confidence 3567767666 9999999998765
No 4
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.93 E-value=8.1e-25 Score=181.16 Aligned_cols=183 Identities=16% Similarity=0.146 Sum_probs=141.1
Q ss_pred HHHHHHHHHhhcCccccccccCCCCChHHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCC
Q 027821 14 NLLLVRLLLEIRMPSIRKSSVSEGLTVEGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYP 92 (218)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 92 (218)
+....+++.++....-|. +.. ..+.+..+.| ....+.+.++.+....... ++..+ .. ....++||
T Consensus 13 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~-~~-----~~~~~~~~ 78 (205)
T TIGR01454 13 FAVMREAFAIAYREVVGD----GPA-PFEEYRRHLGRYFPDIMRIMGLPLEMEEPF---VRESY-RL-----AGEVEVFP 78 (205)
T ss_pred HHHHHHHHHHHHHHhcCC----CCC-CHHHHHHHhCccHHHHHHHcCCCHHHHHHH---HHHHH-Hh-----hcccccCC
Confidence 456667777666554331 123 3445667777 4444444555543211111 12222 11 34578999
Q ss_pred ChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCC
Q 027821 93 GIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDR 165 (218)
Q Consensus 93 Gv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs 165 (218)
|+.++|+ ++|++++|+||+....++..+++ +|+..+|+.+++++ .||+|+++..++++.++++.+|+||||+
T Consensus 79 g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~ 157 (205)
T TIGR01454 79 GVPELLAELRADGVGTAIATGKSGPRARSLLEA-LGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDA 157 (205)
T ss_pred CHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-cCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEEcCC
Confidence 9999999 78999999999999999999999 99999999999875 5799999999999999899999999999
Q ss_pred hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 166 LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 166 ~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+|+++| ++ +|+++|+|.||+++.+++....++ ++++++.++...+
T Consensus 158 ~~Di~aA-~~---~Gi~~i~~~~g~~~~~~l~~~~~~--~~~~~~~~l~~~~ 203 (205)
T TIGR01454 158 VTDLASA-RA---AGTATVAALWGEGDAGELLAARPD--FLLRKPQSLLALC 203 (205)
T ss_pred HHHHHHH-HH---cCCeEEEEEecCCChhhhhhcCCC--eeeCCHHHHHHHh
Confidence 9999999 99 999999999999999888777666 9999999998754
No 5
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.93 E-value=7.4e-25 Score=181.49 Aligned_cols=145 Identities=16% Similarity=0.207 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-
Q 027821 62 RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG- 137 (218)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d- 137 (218)
.+...+..+.+.++|.+.. .....+|||+.++|+ ++|++++|+||+.+..++.++++ +|+..+|+.++|++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~ 136 (213)
T TIGR01449 62 AQRVAELRKLFDRHYEEVA----GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLEL-LGLAKYFSVLIGGDS 136 (213)
T ss_pred hHHHHHHHHHHHHHHHHhc----cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCcHhhCcEEEecCC
Confidence 3445566667777775443 455789999999999 78999999999999999999999 99999999999886
Q ss_pred ---CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 138 ---TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 138 ---~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
.||+|+++.+++++.++++.+|+|||||.+|+++| ++ +|+++|+|.||+++.+.+....++ ++++++.||.
T Consensus 137 ~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa-~~---aG~~~i~v~~g~~~~~~l~~~~a~--~~i~~~~~l~ 210 (213)
T TIGR01449 137 LAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAA-RA---AGCPSVLLTYGYRYGEAIDLLPPD--VLYDSLNELP 210 (213)
T ss_pred CCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHH-HH---CCCeEEEEccCCCCCcchhhcCCC--eEeCCHHHHH
Confidence 57999999999999999999999999999999999 99 999999999999877777666656 9999999998
Q ss_pred hhc
Q 027821 215 RKL 217 (218)
Q Consensus 215 ~~~ 217 (218)
.++
T Consensus 211 ~~~ 213 (213)
T TIGR01449 211 PLL 213 (213)
T ss_pred hhC
Confidence 764
No 6
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.93 E-value=1.5e-24 Score=185.57 Aligned_cols=164 Identities=11% Similarity=0.003 Sum_probs=127.2
Q ss_pred ChHHHHHhhhc--cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCCh
Q 027821 39 TVEGILENWSK--IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQS 113 (218)
Q Consensus 39 ~~~~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~ 113 (218)
+.+.+.+.+.| ....+...+....+...+....++++|.+.. .....+|||+.++|+ ++|++++|+||+++
T Consensus 60 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~----~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~ 135 (248)
T PLN02770 60 TEEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDKEALFRKLA----SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPR 135 (248)
T ss_pred CHHHHHHHcCCCCHHHHHHHHcCcchhhHHHHHHHHHHHHHHHH----HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCH
Confidence 34445566667 3333333322122222233445555554432 345789999999999 78999999999999
Q ss_pred HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 114 RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 114 ~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
..++..|++ +|+..||+.|++++ .||+|+++.+++++.++++.+|+||||+..|+++| ++ ||+++|+|.||
T Consensus 136 ~~~~~~l~~-~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA-~~---aGi~~i~v~~g 210 (248)
T PLN02770 136 ENAELMISL-LGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAG-VA---AGMPVVGLTTR 210 (248)
T ss_pred HHHHHHHHH-cCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHH-HH---CCCEEEEEeCC
Confidence 999999999 99999999998886 57999999999999998999999999999999999 99 99999999999
Q ss_pred CCCHHHHHhccCCCCeEEcChhHHH
Q 027821 190 YNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 190 ~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+ +.+.+..+.++ ++++++.|+.
T Consensus 211 ~-~~~~l~~~~a~--~vi~~~~e~~ 232 (248)
T PLN02770 211 N-PESLLMEAKPT--FLIKDYEDPK 232 (248)
T ss_pred C-CHHHHhhcCCC--EEeccchhhH
Confidence 6 55566655555 9999999843
No 7
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=2.1e-24 Score=182.36 Aligned_cols=166 Identities=14% Similarity=0.097 Sum_probs=132.3
Q ss_pred HHHHHhhhc-cHHHHHH-hcC-CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChH
Q 027821 41 EGILENWSK-IKPVIME-DWS-ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSR 114 (218)
Q Consensus 41 ~~~~~~~~G-~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~ 114 (218)
.+.++.+.| ....+.+ ..+ .+....++....+++.|.+.. .....+|||+.++|+ ++|++++|+||+...
T Consensus 48 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~ 123 (229)
T PRK13226 48 LAQLRPVVSKGARAMLAVAFPELDAAARDALIPEFLQRYEALI----GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEY 123 (229)
T ss_pred HHHHHHHhhhHHHHHHHHHhccCChHHHHHHHHHHHHHHHHhh----hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHH
Confidence 345566666 2233222 222 333444566677777775543 445789999999999 789999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 115 FADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 115 ~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
.+..++++ +|+..+|+.+++++ .||+|+++.+++.+.++++.+|+||||+.+|+++| ++ +|+++|+|.||+
T Consensus 124 ~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA-~~---aG~~~i~v~~g~ 198 (229)
T PRK13226 124 LARLILPQ-LGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAA-RA---AGMPSVAALWGY 198 (229)
T ss_pred HHHHHHHH-cCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHH-HH---CCCcEEEEeecC
Confidence 99999999 99999999998876 57999999999999999999999999999999999 99 999999999999
Q ss_pred CCH-HHHHhccCCCCeEEcChhHHHhhc
Q 027821 191 NTQ-KEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 191 ~~~-~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
... +.+....++ ++++++.||...|
T Consensus 199 ~~~~~~~~~~~~~--~~i~~~~el~~~~ 224 (229)
T PRK13226 199 RLHDDDPLAWQAD--VLVEQPQLLWNPA 224 (229)
T ss_pred CCCCcChhhcCCC--eeeCCHHHHHHHh
Confidence 743 345455555 9999999998754
No 8
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=5.6e-24 Score=184.92 Aligned_cols=165 Identities=18% Similarity=0.198 Sum_probs=136.8
Q ss_pred HHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHH
Q 027821 41 EGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFA 116 (218)
Q Consensus 41 ~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~ 116 (218)
.+.+..+.| ....+.+.++.+.+..++..+.+++++.+. ....++|||+.++|+ ++|++++|+||+.+..+
T Consensus 98 ~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~ 172 (273)
T PRK13225 98 ERDYAQLRQWSSRTIVRRAGLSPWQQARLLQRVQRQLGDC-----LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNI 172 (273)
T ss_pred HHHHHHHhCccHHHHHHHcCCCHHHHHHHHHHHHHHHHhh-----cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 344566666 344444455665555566666777665332 455789999999999 78999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHH
Q 027821 117 DALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 195 (218)
Q Consensus 117 ~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~ 195 (218)
+.+|++ +|+..+|+.|++.+ ..+||+++..++.+.++++++|+||||+..|+++| ++ ||+.+|+|.||+.+.++
T Consensus 173 ~~~L~~-~gl~~~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA-~~---AG~~~I~v~~g~~~~~~ 247 (273)
T PRK13225 173 EAFLQR-QGLRSLFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAA-RQ---VGLIAVAVTWGFNDRQS 247 (273)
T ss_pred HHHHHH-cCChhheEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHH-HH---CCCeEEEEecCCCCHHH
Confidence 999999 99999999998876 45889999999988888899999999999999999 99 99999999999999888
Q ss_pred HHhccCCCCeEEcChhHHHhhc
Q 027821 196 REEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 196 l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+....++ ++++++.||+.++
T Consensus 248 l~~~~ad--~~i~~~~eL~~~~ 267 (273)
T PRK13225 248 LVAACPD--WLLETPSDLLQAV 267 (273)
T ss_pred HHHCCCC--EEECCHHHHHHHH
Confidence 8777666 9999999998865
No 9
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.92 E-value=2.1e-23 Score=174.08 Aligned_cols=169 Identities=15% Similarity=0.113 Sum_probs=134.3
Q ss_pred ChHHHHHhhhc--cHHHHH---HhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcC
Q 027821 39 TVEGILENWSK--IKPVIM---EDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT 110 (218)
Q Consensus 39 ~~~~~~~~~~G--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTn 110 (218)
+.++..+.+.| ....+. ...+.+.+..++..+.|.+.|.+... .....++||+.++|+ ++|++++|+||
T Consensus 35 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~G~~~~L~~L~~~g~~~~ivT~ 111 (220)
T TIGR03351 35 TPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEAYD---DGPPVALPGAEEAFRSLRSSGIKVALTTG 111 (220)
T ss_pred CHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhc---ccCCccCCCHHHHHHHHHHCCCEEEEEeC
Confidence 45555554667 222222 22355545556666777777654320 124589999999999 78999999999
Q ss_pred CChHHHHHHHHHhcCCC--CCCceEEcCC----CCChHHHHHHHHhcCCCC-CCcEEEEcCChhhHHHhhccCccCCceE
Q 027821 111 KQSRFADALLRELAGVT--IPPDRIYGLG----TGPKVEVLKQLQKKPELQ-GMTLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 111 k~~~~~~~iL~~~~gl~--~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~k~~~~AGv~~ 183 (218)
+.++.++.+|++ +|+. .+|+.++|++ .||+|+++..++.+.++. +.+|+||||+..|+++| ++ +||.+
T Consensus 112 ~~~~~~~~~l~~-~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa-~~---aG~~~ 186 (220)
T TIGR03351 112 FDRDTAERLLEK-LGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAG-IN---AGAGA 186 (220)
T ss_pred CchHHHHHHHHH-hhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHH-HH---CCCCe
Confidence 999999999999 9999 9999999886 479999999999999876 68999999999999999 99 99999
Q ss_pred -EEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 184 -YLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 184 -i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|+|.||+.+.+.+....++ ++++++.|+..-+
T Consensus 187 ~i~~~~g~~~~~~~~~~~~~--~~i~~~~~l~~~~ 219 (220)
T TIGR03351 187 VVGVLTGAHDAEELSRHPHT--HVLDSVADLPALL 219 (220)
T ss_pred EEEEecCCCcHHHHhhcCCc--eeecCHHHHHHhh
Confidence 9999999888888766555 9999999987643
No 10
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.92 E-value=1.7e-23 Score=180.42 Aligned_cols=145 Identities=11% Similarity=0.015 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC-ceEEcCC
Q 027821 62 RDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP-DRIYGLG 137 (218)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F-d~I~g~d 137 (218)
.+...+..+.|+++|.+.. .....+|||+.++|+ ++|++++|+||+.+..+..+|++ +|+..+| |.|+|++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~----~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~-~~l~~~~~d~i~~~~ 152 (267)
T PRK13478 78 EADVDALYAAFEPLQIAKL----ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPL-AAAQGYRPDHVVTTD 152 (267)
T ss_pred HHHHHHHHHHHHHHHHHHH----hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-HhhcCCCceEEEcCC
Confidence 3444556666766664433 456789999999999 78999999999999999999999 9998875 8898876
Q ss_pred ----CCChHHHHHHHHhcCCCC-CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC--------------------
Q 027821 138 ----TGPKVEVLKQLQKKPELQ-GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT-------------------- 192 (218)
Q Consensus 138 ----~kpkPe~l~~l~~~~~~~-~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~-------------------- 192 (218)
.||+|+++..++.+.++. +.+|+|||||.+|+++| ++ ||+++|+|.||++.
T Consensus 153 ~~~~~KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA-~~---aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T PRK13478 153 DVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEG-LN---AGMWTVGVILSGNELGLSEEEYQALSAAELAARR 228 (267)
T ss_pred cCCCCCCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHH-HH---CCCEEEEEccCcccccCCHHHHHhcCHHHHHHHH
Confidence 579999999999999875 68999999999999999 99 99999999999873
Q ss_pred ---HHHHHhccCCCCeEEcChhHHHhhc
Q 027821 193 ---QKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 193 ---~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.+.+..++++ ++++++.||...+
T Consensus 229 ~~~~~~l~~~~a~--~vi~~~~~l~~~l 254 (267)
T PRK13478 229 ERARARLRAAGAH--YVIDTIADLPAVI 254 (267)
T ss_pred HHHHHHHHHcCCC--eehhhHHHHHHHH
Confidence 3567677666 9999999998754
No 11
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.91 E-value=3.6e-23 Score=178.68 Aligned_cols=166 Identities=13% Similarity=0.068 Sum_probs=130.5
Q ss_pred CChHHHHHhhhc--cHHHHHHhcC--CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcC
Q 027821 38 LTVEGILENWSK--IKPVIMEDWS--ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT 110 (218)
Q Consensus 38 ~~~~~~~~~~~G--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTn 110 (218)
++.++.++.++| ....+...++ .+.+...++...+++.|.... .....+|||+.++|+ ++|++++|+||
T Consensus 58 ~~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn 133 (260)
T PLN03243 58 PPPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDLYEYMQ----GGLYRLRPGSREFVQALKKHEIPIAVAST 133 (260)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH----ccCcccCCCHHHHHHHHHHCCCEEEEEeC
Confidence 345667777888 3333333332 233344455555555553222 234679999999999 78999999999
Q ss_pred CChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 111 KQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 111 k~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
+++..++.+|++ +|+..||+.|++++ .||+|+++..++.+.++++.+|+|||||..|+++| ++ |||++|+|
T Consensus 134 ~~~~~~~~~l~~-~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA-~~---aG~~~i~v 208 (260)
T PLN03243 134 RPRRYLERAIEA-VGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAA-HD---GCMKCVAV 208 (260)
T ss_pred cCHHHHHHHHHH-cCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHH-HH---cCCEEEEE
Confidence 999999999999 99999999999886 57999999999999999999999999999999999 99 99999999
Q ss_pred ecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 187 DWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 187 ~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
. |+.+...+. .++ ++++++.|+..|.
T Consensus 209 ~-g~~~~~~l~--~ad--~vi~~~~el~~~~ 234 (260)
T PLN03243 209 A-GKHPVYELS--AGD--LVVRRLDDLSVVD 234 (260)
T ss_pred e-cCCchhhhc--cCC--EEeCCHHHHHHHH
Confidence 5 777666543 334 9999999998764
No 12
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=1.3e-22 Score=176.00 Aligned_cols=146 Identities=19% Similarity=0.237 Sum_probs=125.3
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
.+++..++..+.|.+.|.+. .....+|||+.++|+ ++|++++|+||++...++.++++ +|+..+|+.|+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~-~~i~~~f~~i~~~ 150 (272)
T PRK13223 77 VDDELAEQALALFMEAYADS-----HELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQ-MKIGRYFRWIIGG 150 (272)
T ss_pred CCHHHHHHHHHHHHHHHHhc-----CcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHH-cCcHhhCeEEEec
Confidence 44455566667777766432 234679999999999 78999999999999999999999 9999999999988
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||+|++++.++.+.++++.+|+||||+.+|+++| ++ +|+++++|.||+.+.+.+....++ ++++++.+
T Consensus 151 d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA-~~---aGi~~i~v~~G~~~~~~l~~~~~~--~vi~~l~e 224 (272)
T PRK13223 151 DTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAA-KA---AGVQCVALSYGYNHGRPIAEESPA--LVIDDLRA 224 (272)
T ss_pred CCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHH-HH---CCCeEEEEecCCCCchhhhhcCCC--EEECCHHH
Confidence 6 47999999999999999999999999999999999 99 999999999999888777666555 99999999
Q ss_pred HHhhc
Q 027821 213 FSRKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
|...+
T Consensus 225 l~~~~ 229 (272)
T PRK13223 225 LLPGC 229 (272)
T ss_pred HHHHH
Confidence 98653
No 13
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.90 E-value=3.5e-22 Score=180.28 Aligned_cols=164 Identities=12% Similarity=0.039 Sum_probs=132.2
Q ss_pred CChHHHHHhhhc--cHHHHHHhc--CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcC
Q 027821 38 LTVEGILENWSK--IKPVIMEDW--SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTT 110 (218)
Q Consensus 38 ~~~~~~~~~~~G--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTn 110 (218)
.+.++.+..+.| ....+.... ..++...+++.+.+++.|.+.. .....+|||+.++|+ ++|++++|+||
T Consensus 165 ~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~~~----~~~~~l~pGa~ElL~~Lk~~GiklaIaSn 240 (381)
T PLN02575 165 PPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQALQ----GGIYRLRTGSQEFVNVLMNYKIPMALVST 240 (381)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHh----ccCCCcCcCHHHHHHHHHHCCCeEEEEeC
Confidence 346666778888 333333332 2244555666777777775443 445689999999999 88999999999
Q ss_pred CChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 111 KQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 111 k~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
+++..++.+|++ +||..|||.|++++ .||+|+++..++.++++.+.+|+||||+..|++|| ++ |||++|+|
T Consensus 241 ~~~~~~~~~L~~-lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAA-k~---AGm~~IgV 315 (381)
T PLN02575 241 RPRKTLENAIGS-IGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAA-HD---ARMKCVAV 315 (381)
T ss_pred CCHHHHHHHHHH-cCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH-HH---cCCEEEEE
Confidence 999999999999 99999999999986 47999999999999999999999999999999999 99 99999999
Q ss_pred ecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 187 DWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 187 ~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.||+ ...++ ..++ ++++++.||..
T Consensus 316 ~~~~-~~~~l--~~Ad--~iI~s~~EL~~ 339 (381)
T PLN02575 316 ASKH-PIYEL--GAAD--LVVRRLDELSI 339 (381)
T ss_pred CCCC-ChhHh--cCCC--EEECCHHHHHH
Confidence 9875 33333 2345 99999999854
No 14
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.89 E-value=6.2e-22 Score=165.16 Aligned_cols=147 Identities=20% Similarity=0.288 Sum_probs=126.5
Q ss_pred CCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC
Q 027821 60 ENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
.+.+..++....+.++|.+.. .....++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.+++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~ 142 (226)
T PRK13222 68 PDEELLEKLRELFDRHYAENV----AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEA-LGIADYFSVVIGG 142 (226)
T ss_pred ccHHHHHHHHHHHHHHHHHhc----cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCccCccEEEcC
Confidence 445556666777777775443 445789999999999 78999999999999999999999 9999999999987
Q ss_pred C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ .||+|++++.++.+.+.++.+|+||||+.+|+++| ++ +|+++|+|.||+.+..++... .|+++++++.|
T Consensus 143 ~~~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a-~~---~g~~~i~v~~g~~~~~~~~~~--~~~~~i~~~~~ 216 (226)
T PRK13222 143 DSLPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAA-RA---AGCPSVGVTYGYNYGEPIALS--EPDVVIDHFAE 216 (226)
T ss_pred CCCCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHH-HH---CCCcEEEECcCCCCccchhhc--CCCEEECCHHH
Confidence 5 57999999999999999999999999999999999 99 999999999999876666544 45599999999
Q ss_pred HHhhc
Q 027821 213 FSRKL 217 (218)
Q Consensus 213 l~~~~ 217 (218)
|...+
T Consensus 217 l~~~l 221 (226)
T PRK13222 217 LLPLL 221 (226)
T ss_pred HHHHH
Confidence 98875
No 15
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.88 E-value=1.1e-21 Score=164.40 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CC
Q 027821 67 DLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TG 139 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~k 139 (218)
+..+++.+.+.+.. .....+|||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.+++++ .|
T Consensus 74 ~~~~~~~~~~~~~~----~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~~~~~~~~~~~K 148 (222)
T PRK10826 74 EVVQRIIARVISLI----EETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTM-FDLRDYFDALASAEKLPYSK 148 (222)
T ss_pred HHHHHHHHHHHHHH----hcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHh-CcchhcccEEEEcccCCCCC
Confidence 44445555553332 445789999999999 78999999999999999999999 99999999999886 57
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
|+|++++.++...++++++|+||||+.+|+++| ++ ||+++|+|.++....+.. ...++ +++.++.||..|
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA-~~---aG~~~i~v~~~~~~~~~~-~~~~~--~~~~~~~dl~~~ 218 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAA-KA---ARMRSIVVPAPEQQNDPR-WALAD--VKLESLTELTAA 218 (222)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHH-HH---cCCEEEEecCCccCchhh-hhhhh--eeccCHHHHhhh
Confidence 999999999999999999999999999999999 99 999999999887654432 22345 899999999876
No 16
>PRK11587 putative phosphatase; Provisional
Probab=99.86 E-value=1.3e-20 Score=157.65 Aligned_cols=119 Identities=18% Similarity=0.099 Sum_probs=102.4
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
.....+|||+.++|+ ++|++++|+||+....+...++. .|+. +|+.+++++ .||+|+++..++...++.+.
T Consensus 79 ~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~-~~l~-~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~ 156 (218)
T PRK11587 79 TEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKA-AGLP-APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQ 156 (218)
T ss_pred hcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHh-cCCC-CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcc
Confidence 445789999999999 78999999999999888889998 9984 678888765 57999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+|+|||||..|+++| ++ ||+++|+|.||.... .... |+++++++.||.
T Consensus 157 ~~l~igDs~~di~aA-~~---aG~~~i~v~~~~~~~---~~~~--~~~~~~~~~el~ 204 (218)
T PRK11587 157 ECVVVEDAPAGVLSG-LA---AGCHVIAVNAPADTP---RLDE--VDLVLHSLEQLT 204 (218)
T ss_pred cEEEEecchhhhHHH-HH---CCCEEEEECCCCchh---hhcc--CCEEecchhhee
Confidence 999999999999999 99 999999999986432 2233 449999999874
No 17
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.86 E-value=4.1e-21 Score=160.01 Aligned_cols=123 Identities=21% Similarity=0.230 Sum_probs=106.9
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
....++||+.++|+ ++|++++|+||+....+...+++ +|+..|||.|++++ .||+|+++..++++.++++.+
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLER-LGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHh-CChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 34689999999999 78999999999999999999999 99999999998875 579999999999999999999
Q ss_pred EEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
++|||||. +|+++| ++ +|+++|+|.+|.....+.. ....|+++++++.||+
T Consensus 170 ~~~igDs~~~di~~A-~~---aG~~~i~~~~~~~~~~~~~-~~~~~~~~i~~~~el~ 221 (221)
T TIGR02253 170 AVMVGDRLDKDIKGA-KN---LGMKTVWINQGKSSKMEDD-VYPYPDYEISSLRELL 221 (221)
T ss_pred EEEECCChHHHHHHH-HH---CCCEEEEECCCCCcccccc-cccCCCeeeCcHHhhC
Confidence 99999998 899999 99 9999999999986543322 1234559999999874
No 18
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.85 E-value=1.6e-20 Score=156.88 Aligned_cols=165 Identities=11% Similarity=0.071 Sum_probs=121.2
Q ss_pred CChHHHHHhhhc-----cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHHhCCCcEEEEcCCC
Q 027821 38 LTVEGILENWSK-----IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQ 112 (218)
Q Consensus 38 ~~~~~~~~~~~G-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~~~g~~laIvTnk~ 112 (218)
++.++....+.| ....+...++.+.. .+++...|++.+.+.. .....++||+.++|+..+++++|+||++
T Consensus 37 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~gv~~~L~~L~~~~~ivTn~~ 111 (221)
T PRK10563 37 LSLEEVFKRFKGVKLYEIIDIISKEHGVTLA-KAELEPVYRAEVARLF----DSELEPIAGANALLESITVPMCVVSNGP 111 (221)
T ss_pred CCHHHHHHHhcCCCHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHHH----HccCCcCCCHHHHHHHcCCCEEEEeCCc
Confidence 345566677766 22333344454321 1233344555443322 3457899999999996679999999999
Q ss_pred hHHHHHHHHHhcCCCCCCc-eEEcCC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 113 SRFADALLRELAGVTIPPD-RIYGLG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 113 ~~~~~~iL~~~~gl~~~Fd-~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+..++..|++ +|+..+|+ .|++++ .||+|+++..++.+.++++.+|+||||+..|+++| ++ ||+++|++.
T Consensus 112 ~~~~~~~l~~-~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA-~~---aG~~~i~~~ 186 (221)
T PRK10563 112 VSKMQHSLGK-TGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSG-IA---AGMEVFYFC 186 (221)
T ss_pred HHHHHHHHHh-cChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHH-HH---CCCEEEEEC
Confidence 9999999999 99999996 676663 57999999999999999999999999999999999 99 999999997
Q ss_pred cCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 188 WGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 188 ~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
++.+... .. ..++ .+++++.||.+-
T Consensus 187 ~~~~~~~-~~-~~~~--~~~~~~~~l~~~ 211 (221)
T PRK10563 187 ADPHNKP-ID-HPLV--TTFTDLAQLPEL 211 (221)
T ss_pred CCCCCcc-hh-hhhh--HHHHHHHHHHHH
Confidence 6654432 21 2223 568888887753
No 19
>PRK09449 dUMP phosphatase; Provisional
Probab=99.84 E-value=8.8e-21 Score=158.66 Aligned_cols=124 Identities=16% Similarity=0.138 Sum_probs=105.6
Q ss_pred cccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCC-CC
Q 027821 85 IGANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQ-GM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~-~~ 157 (218)
.....+|||+.++|+ ++|++++|+||+....++..|++ +|+..+||.|++++ .||+|+++..++.+.++. ++
T Consensus 91 ~~~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 91 AEICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLER-TGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred hhcCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHh-CChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 334679999999999 77899999999999999999999 99999999998876 579999999999999864 47
Q ss_pred cEEEEcCCh-hhHHHhhccCccCCceEEEEecC-CCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 158 TLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWG-YNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 158 e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G-~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+|+||||+. +|+++| ++ +|+++|++.++ ..+. ... .|+++++++.||...+|
T Consensus 170 ~~~~vgD~~~~Di~~A-~~---aG~~~i~~~~~~~~~~---~~~--~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 170 RVLMVGDNLHSDILGG-IN---AGIDTCWLNAHGREQP---EGI--APTYQVSSLSELEQLLC 223 (224)
T ss_pred cEEEEcCCcHHHHHHH-HH---CCCcEEEECCCCCCCC---CCC--CCeEEECCHHHHHHHHh
Confidence 899999998 699999 99 99999999854 3221 222 45599999999988765
No 20
>PLN02940 riboflavin kinase
Probab=99.84 E-value=5.7e-20 Score=166.72 Aligned_cols=135 Identities=12% Similarity=0.087 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHH-HhcCCCCCCceEEcCC----C
Q 027821 67 DLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLR-ELAGVTIPPDRIYGLG----T 138 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~-~~~gl~~~Fd~I~g~d----~ 138 (218)
+..+.+++.+.+. .....++||+.++|+ ++|++++|+||+.+..++..|+ + +|+..+||.|++++ .
T Consensus 76 ~~~~~~~~~~~~~-----~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~-~gl~~~Fd~ii~~d~v~~~ 149 (382)
T PLN02940 76 EFNSEITPLLSEQ-----WCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCH-QGWKESFSVIVGGDEVEKG 149 (382)
T ss_pred HHHHHHHHHHHHH-----HccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhc-cChHhhCCEEEehhhcCCC
Confidence 3444555555332 234679999999999 8999999999999999999987 7 89999999999886 5
Q ss_pred CChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 139 GPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 139 kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
||+|+++..+++..++++.+|+|||||..|+++| ++ ||+++|+|.||+.+.. ... .|+++++++.|+..
T Consensus 150 KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA-~~---aGi~~I~v~~g~~~~~--~~~--~ad~~i~sl~el~~ 218 (382)
T PLN02940 150 KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAG-KA---AGMEVIAVPSIPKQTH--LYS--SADEVINSLLDLQP 218 (382)
T ss_pred CCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHH-HH---cCCEEEEECCCCcchh--hcc--CccEEeCCHhHcCH
Confidence 7999999999999999999999999999999999 99 9999999999976543 223 34599999999753
No 21
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.84 E-value=5.7e-20 Score=170.10 Aligned_cols=120 Identities=17% Similarity=0.269 Sum_probs=106.3
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---CCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++|||+.++|+ ++|++++|+||+.++.++.+|++ +|+..||+.+++++ .+|||+++..++.+. ++.+|+
T Consensus 328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~-~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v 404 (459)
T PRK06698 328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSY-YDLDQWVTETFSIEQINSLNKSDLVKSILNKY--DIKEAA 404 (459)
T ss_pred CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHH-CCcHhhcceeEecCCCCCCCCcHHHHHHHHhc--CcceEE
Confidence 4689999999999 78999999999999999999999 99999999999886 359999998888775 467899
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+.+|+++| ++ ||+.+|+|.||+...+++ .. |+++++++.|+..++
T Consensus 405 ~VGDs~~Di~aA-k~---AG~~~I~v~~~~~~~~~~--~~--~d~~i~~l~el~~~l 453 (459)
T PRK06698 405 VVGDRLSDINAA-KD---NGLIAIGCNFDFAQEDEL--AQ--ADIVIDDLLELKGIL 453 (459)
T ss_pred EEeCCHHHHHHH-HH---CCCeEEEEeCCCCccccc--CC--CCEEeCCHHHHHHHH
Confidence 999999999999 99 999999999998765543 23 459999999998765
No 22
>PLN02811 hydrolase
Probab=99.84 E-value=3e-20 Score=155.84 Aligned_cols=120 Identities=15% Similarity=0.130 Sum_probs=100.7
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH-HHHHHhcCCCCCCceEEcCC------CCChHHHHHHHHhcCC--
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFAD-ALLRELAGVTIPPDRIYGLG------TGPKVEVLKQLQKKPE-- 153 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~-~iL~~~~gl~~~Fd~I~g~d------~kpkPe~l~~l~~~~~-- 153 (218)
....+|||+.++|+ ++|++++|+||+.+.... ..+++ .++..+|+.+++++ .||+|+++..++.+.+
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~-~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRH-GELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHccc-HHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCC
Confidence 34679999999999 889999999999886554 34555 68889999998776 4799999999988885
Q ss_pred -CCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 154 -LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 154 -~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+++.+|+||||+..|+++| ++ +|+++|+|.||+.+...+ .. |+++++++.|+.
T Consensus 154 ~~~~~~~v~IgDs~~di~aA-~~---aG~~~i~v~~~~~~~~~~--~~--~d~vi~~~~e~~ 207 (220)
T PLN02811 154 PVDPGKVLVFEDAPSGVEAA-KN---AGMSVVMVPDPRLDKSYC--KG--ADQVLSSLLDFK 207 (220)
T ss_pred CCCccceEEEeccHhhHHHH-HH---CCCeEEEEeCCCCcHhhh--hc--hhhHhcCHhhCC
Confidence 7899999999999999999 99 999999999998765433 23 449999998864
No 23
>PRK06769 hypothetical protein; Validated
Probab=99.84 E-value=5.4e-21 Score=155.53 Aligned_cols=124 Identities=14% Similarity=0.032 Sum_probs=100.7
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChH--------HHHHHHHHhcCCCCCCceEE-cCC----CCChHHHHHHHHh
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSR--------FADALLRELAGVTIPPDRIY-GLG----TGPKVEVLKQLQK 150 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~--------~~~~iL~~~~gl~~~Fd~I~-g~d----~kpkPe~l~~l~~ 150 (218)
...+||||.++|+ ++|++++|+||++.. .+...+++ +|+..+|..+. +++ .||+|+++.++++
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG-FGFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh-CCcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 4578999999999 789999999998752 23445777 88877654433 332 6899999999999
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCH------HHHHhccCCCCeEEcChhHHHhhc
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQ------KEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~------~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+++.++.+|+||||+..|+++| ++ +|+++|+|.||++.. +.+... .|+++++++.||..++
T Consensus 105 ~l~~~p~~~i~IGD~~~Di~aA-~~---aGi~~i~v~~g~~~~~~~~~~~~l~~~--~~~~~~~~~~el~~~l 171 (173)
T PRK06769 105 KHGLDLTQCAVIGDRWTDIVAA-AK---VNATTILVRTGAGYDALHTYRDKWAHI--EPNYIAENFEDAVNWI 171 (173)
T ss_pred HcCCCHHHeEEEcCCHHHHHHH-HH---CCCeEEEEecCCCchhhhhhhcccccC--CCcchhhCHHHHHHHH
Confidence 9998899999999999999999 99 999999999998663 223333 4559999999999875
No 24
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.83 E-value=4.3e-20 Score=153.65 Aligned_cols=120 Identities=18% Similarity=0.275 Sum_probs=105.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcC-CCCCCc
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKP-ELQGMT 158 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~-~~~~~e 158 (218)
..+++||+.++|+ ++ ++++|+||+....++.+|++ +|+..+||.|++++ .||+|+++..++... ++++.+
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 172 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRK-SGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEE 172 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHH-CCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchh
Confidence 4679999999999 55 99999999999999999999 99999999998875 579999999999988 889999
Q ss_pred EEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 159 LHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 159 ~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
|+||||+. +|+++| ++ +||++|+++||..+. ... ..|+++++++.||...
T Consensus 173 ~v~igD~~~~di~~A-~~---~G~~~i~~~~~~~~~--~~~--~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 173 VLMIGDSLTADIKGG-QN---AGLDTCWMNPDMHPN--PDD--IIPTYEIRSLEELYEI 223 (224)
T ss_pred eEEECCCcHHHHHHH-HH---CCCcEEEECCCCCCC--CCC--CCCceEECCHHHHHhh
Confidence 99999998 799999 99 999999999987653 122 3566999999999864
No 25
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.83 E-value=4.3e-20 Score=150.22 Aligned_cols=119 Identities=24% Similarity=0.236 Sum_probs=98.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEEcC------------
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL------------ 136 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~g~------------ 136 (218)
...+|||+.++|+ ++|++++|+||++. .....++.+ +++. |+.++.+
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~i~~~~~~~~~~~~~~~ 100 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE-RDVD--LDGIYYCPHHPEGVEEFRQ 100 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCCC--ccEEEECCCCCcccccccC
Confidence 4678999999999 89999999999985 455677888 7877 7776431
Q ss_pred C---CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceE-EEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 137 G---TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL-YLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 137 d---~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~-i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
+ +||+|+++..++++.++++.+|+||||+.+|+++| ++ ||+++ ++|.||+...... .+. |+++++++.|
T Consensus 101 ~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA-~~---aG~~~~i~v~~g~~~~~~~-~~~--ad~~i~~~~e 173 (176)
T TIGR00213 101 VCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAG-VA---AKVKTNVLVRTGKPITPEA-ENI--ADWVLNSLAD 173 (176)
T ss_pred CCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHH-HH---CCCcEEEEEecCCcccccc-ccc--CCEEeccHHH
Confidence 1 58999999999999999999999999999999999 99 99998 8999998653322 233 4599999999
Q ss_pred HHh
Q 027821 213 FSR 215 (218)
Q Consensus 213 l~~ 215 (218)
|.+
T Consensus 174 l~~ 176 (176)
T TIGR00213 174 LPQ 176 (176)
T ss_pred hhC
Confidence 864
No 26
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.82 E-value=1.5e-19 Score=148.75 Aligned_cols=158 Identities=14% Similarity=0.098 Sum_probs=113.7
Q ss_pred CCChHHHHHhhhc-cHHHHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH--hCCCcEEEEcCCCh
Q 027821 37 GLTVEGILENWSK-IKPVIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK--FASSRIYIVTTKQS 113 (218)
Q Consensus 37 ~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~--~~g~~laIvTnk~~ 113 (218)
|++.+++...+.+ ....+...++.+.+...+....|++. .+.....+|||+.++|+ +++++++++||++.
T Consensus 28 g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~ 100 (197)
T PHA02597 28 NIPTDHILKMIQDERFRDPGELFGCDQELAKKLIEKYNNS-------DFIRYLSAYDDALDVINKLKEDYDFVAVTALGD 100 (197)
T ss_pred CCCHHHHHHHHhHhhhcCHHHHhcccHHHHHHHhhhhhHH-------HHHHhccCCCCHHHHHHHHHhcCCEEEEeCCcc
Confidence 4555554433333 22223334444444444444444421 11345679999999999 44568899999887
Q ss_pred HHHHHHHHHhcCCCC----CCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC--CceEEEE
Q 027821 114 RFADALLRELAGVTI----PPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD--GWNLYLG 186 (218)
Q Consensus 114 ~~~~~iL~~~~gl~~----~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A--Gv~~i~V 186 (218)
......+++ +++.. +|+.+++++ .+|||+++..++.+.+ +.+++|||||..|+++| ++ | ||++|+|
T Consensus 101 ~~~~~~~~~-~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA-~~---a~~Gi~~i~~ 173 (197)
T PHA02597 101 SIDALLNRQ-FNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAA-HE---ALSQLPVIHM 173 (197)
T ss_pred chhHHHHhh-CCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHH-HH---HHcCCcEEEe
Confidence 776667777 88865 567777765 6799999999999887 67899999999999999 99 9 9999999
Q ss_pred ecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 187 DWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 187 ~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
+||+. ...+.|++.+++++|+.
T Consensus 174 ~~~~~------~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 174 LRGER------DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cchhh------ccccchhhhhccHHHHh
Confidence 99964 34556679999999986
No 27
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.82 E-value=1.5e-19 Score=152.53 Aligned_cols=123 Identities=11% Similarity=0.048 Sum_probs=103.3
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
....+|||+.++|+ ++|++++|+||++++.++..+++ +|+..+|+.|++++ .||+|+++..++++.++++.+
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEH-TGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHH-CCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 44689999999999 78999999999999999999999 99999999998876 579999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCce-EEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWN-LYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~-~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
|+|||||..|+++| ++ +||+ +++|.++.+...+... ... ..++++.+++..
T Consensus 169 ~l~igDs~~di~aA-~~---aG~~~~~~v~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 220 (224)
T PRK14988 169 TLFIDDSEPILDAA-AQ---FGIRYCLGVTNPDSGIAEKQY-QRH--PSLNDYRRLIPS 220 (224)
T ss_pred EEEEcCCHHHHHHH-HH---cCCeEEEEEeCCCCCccchhc-cCC--CcHHHHHHHhhh
Confidence 99999999999999 99 9997 6889988765443221 122 336666666544
No 28
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.82 E-value=1.6e-19 Score=157.78 Aligned_cols=119 Identities=13% Similarity=0.159 Sum_probs=101.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC---CCCceEEcCC---CCChHHHHHHHHhcCCCCCCc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT---IPPDRIYGLG---TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~---~~Fd~I~g~d---~kpkPe~l~~l~~~~~~~~~e 158 (218)
.+++||+.++|+ ++|++++|+||+....+..++++ ++.. .+|+.+.+.+ .||+|+++..++...++++.+
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~-~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT-LLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 589999999999 78999999999999999999998 6433 3445553333 579999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
|+||||+.+|+++| ++ +|+++|+|.||+++.+++ .. ++++++++.|+..
T Consensus 222 ~l~IGDs~~Di~aA-~~---aG~~~i~v~~g~~~~~~l--~~--ad~vi~~~~~l~~ 270 (286)
T PLN02779 222 CVVVEDSVIGLQAA-KA---AGMRCIVTKSSYTADEDF--SG--ADAVFDCLGDVPL 270 (286)
T ss_pred EEEEeCCHHhHHHH-HH---cCCEEEEEccCCcccccc--CC--CcEEECChhhcch
Confidence 99999999999999 99 999999999999887665 23 4499999998864
No 29
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.80 E-value=1.1e-18 Score=142.03 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=87.2
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....++||+ ++|+ +++++++|+||+.+..++..|++ +|+..|||.|+|++ .||+|+++..+..+++.++.+|
T Consensus 85 ~~~~~~~~~-e~L~~L~~~~~l~I~T~~~~~~~~~~l~~-~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 162 (188)
T PRK10725 85 DSVEPLPLI-EVVKAWHGRRPMAVGTGSESAIAEALLAH-LGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQC 162 (188)
T ss_pred ccCCCccHH-HHHHHHHhCCCEEEEcCCchHHHHHHHHh-CCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHe
Confidence 345789974 7887 66699999999999999999999 99999999999886 5799999999999999889999
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+||||+.+|+++| ++ +|+++|+|.
T Consensus 163 l~igDs~~di~aA-~~---aG~~~i~~~ 186 (188)
T PRK10725 163 VVFEDADFGIQAA-RA---AGMDAVDVR 186 (188)
T ss_pred EEEeccHhhHHHH-HH---CCCEEEeec
Confidence 9999999999999 99 999999984
No 30
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.79 E-value=7.2e-19 Score=143.41 Aligned_cols=123 Identities=23% Similarity=0.208 Sum_probs=100.8
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEEcC-----C----CC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGL-----G----TG 139 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~g~-----d----~k 139 (218)
...+|||+.++|+ ++|++++|+||++. +.+..++++ +|+ +|+.++.+ + .|
T Consensus 27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~--~f~~i~~~~~~~~~~~~~~K 103 (181)
T PRK08942 27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD-RGG--RLDGIYYCPHHPEDGCDCRK 103 (181)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcCCC
Confidence 4579999999999 78999999999973 455667888 887 47776532 1 57
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
|+|+++..++...++++++|+||||+.+|+.+| ++ +|+.+|+|.||+.... +....+.++++++++.++.+++
T Consensus 104 P~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A-~~---aG~~~i~v~~g~~~~~-~~~~~~~~~~ii~~l~el~~~l 176 (181)
T PRK08942 104 PKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAA-AA---AGVTPVLVRTGKGVTT-LAEGAAPGTWVLDSLADLPQAL 176 (181)
T ss_pred CCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHH-HH---CCCeEEEEcCCCCchh-hhcccCCCceeecCHHHHHHHH
Confidence 999999999999998999999999999999999 99 9999999999986543 3333331259999999998875
No 31
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.79 E-value=1.2e-18 Score=140.99 Aligned_cols=118 Identities=17% Similarity=0.148 Sum_probs=97.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG 135 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g 135 (218)
+.+++.+......+.+.|.+... .....++||+.++|+ ++|++++|+||+ ..++.+|++ +|+..+|+.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~-~~l~~~f~~v~~ 134 (185)
T TIGR02009 61 GLSLETIHQLAERKNELYRELLR---LTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAK-LGLTDYFDAIVD 134 (185)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh---ccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHH-cChHHHCCEeee
Confidence 35555555555556555533210 134689999999999 789999999998 668999999 999999999988
Q ss_pred CC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 136 LG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 136 ~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
++ .||+|+++.+++++.+.++.+++||||+..|+++| ++ +|+++|+|
T Consensus 135 ~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA-~~---~G~~~i~v 185 (185)
T TIGR02009 135 ADEVKEGKPHPETFLLAAELLGVSPNECVVFEDALAGVQAA-RA---AGMFAVAV 185 (185)
T ss_pred hhhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHH-HH---CCCeEeeC
Confidence 75 57999999999999998899999999999999999 99 99999986
No 32
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.79 E-value=3.6e-18 Score=171.61 Aligned_cols=118 Identities=15% Similarity=0.163 Sum_probs=108.4
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC-CCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT-IPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~-~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
.+|||+.++|+ ++|++++|+||+.+..++..|++ +|+. .+||.|++++ .||+|+++..+++++++++.+|+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~-~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAA-AGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHH-cCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 58999999999 88999999999999999999999 9996 7999999886 57999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
||||+..|+++| ++ +||++|+|.||+ +.+++..++++ ++++++.|+.
T Consensus 240 ~IgDs~~Di~AA-~~---aGm~~I~v~~~~-~~~~L~~~~a~--~vi~~l~el~ 286 (1057)
T PLN02919 240 VIEDALAGVQAA-RA---AGMRCIAVTTTL-SEEILKDAGPS--LIRKDIGNIS 286 (1057)
T ss_pred EEcCCHHHHHHH-HH---cCCEEEEECCCC-CHHHHhhCCCC--EEECChHHCC
Confidence 999999999999 99 999999999997 56777777666 9999999874
No 33
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.79 E-value=1.5e-18 Score=140.42 Aligned_cols=118 Identities=16% Similarity=0.175 Sum_probs=95.6
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
+++...+..+.+.++|.+.. .. .....++||+.++|+ ++|++++|+||+.. ....|++ +|+..+|+.+++++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~-~~l~~~f~~~~~~~ 135 (185)
T TIGR01990 61 SEEEKEELAERKNDYYVELL-KE-LTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEK-LGLIDYFDAIVDPA 135 (185)
T ss_pred CHHHHHHHHHHHHHHHHHHH-Hh-cCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHh-cCcHhhCcEEEehh
Confidence 44445555555555554321 01 123579999999999 78999999999754 4678999 99999999998875
Q ss_pred ----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 138 ----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 138 ----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.||+|+++..++++.++++.+|+||||+.+|+++| ++ +||++|+|+
T Consensus 136 ~~~~~kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA-~~---aG~~~i~v~ 185 (185)
T TIGR01990 136 EIKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAI-KA---AGMFAVGVG 185 (185)
T ss_pred hcCCCCCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHH-HH---cCCEEEecC
Confidence 57999999999999998999999999999999999 99 999999984
No 34
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.79 E-value=2.1e-18 Score=146.54 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=99.3
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....+|||+.++|+ +.+++++|+||++.+ +++ +|+..|||.|++++ .||+|+++..++.+.++++.+|
T Consensus 110 ~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~-~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 183 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PEL-FGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEI 183 (238)
T ss_pred hcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHH-CCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHE
Confidence 34689999999999 667999999998865 488 99999999998876 5799999999999999899999
Q ss_pred EEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 160 HFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 160 l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
+||||+ ..|+.+| ++ +|+++|+|..+.............|++.+.++.||..-
T Consensus 184 ~~VGD~~~~Di~~A-~~---aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~ 237 (238)
T PRK10748 184 LHVGDDLTTDVAGA-IR---CGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSL 237 (238)
T ss_pred EEEcCCcHHHHHHH-HH---CCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhh
Confidence 999999 5999999 99 99999999775433111111112466899999998764
No 35
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.78 E-value=2.6e-18 Score=144.90 Aligned_cols=124 Identities=16% Similarity=0.172 Sum_probs=104.8
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
.....++||+.++|+ ++|++++++||+++..++.+|+. +|+.+||+.+++++ .||+|+++....+++++++.
T Consensus 82 ~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~-~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~ 160 (221)
T COG0637 82 LEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLAR-LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPE 160 (221)
T ss_pred hcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHH-ccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChH
Confidence 556789999999999 78899999999999999999999 99999999987765 68999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCC--HHHHHhccCCCCeEEcChhHHHh
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT--QKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~--~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
+|+.|+||.++++|| ++ |||.+|++.-+... ...+.....+ ....++.++..
T Consensus 161 ~CvviEDs~~Gi~Aa-~a---AGm~vv~v~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ 214 (221)
T COG0637 161 ECVVVEDSPAGIQAA-KA---AGMRVVGVPAGHDRPHLDPLDAHGAD--TVLLDLAELPA 214 (221)
T ss_pred HeEEEecchhHHHHH-HH---CCCEEEEecCCCCccccchhhhhhcc--hhhccHHHHHH
Confidence 999999999999999 99 99999999765442 2333333334 56666666654
No 36
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.76 E-value=9.1e-18 Score=138.04 Aligned_cols=97 Identities=18% Similarity=0.207 Sum_probs=90.6
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..++||+.++|+ ++|++++|+||++...++..+++ +|+..+||.|++++ .||+|+++..++.+.++++.+|+
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~-~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKH-AGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-CCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 468999999999 67999999999999999999999 99999999999886 57999999999999999999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
||||+.+|+++| ++ +|+++|+|..+
T Consensus 170 ~vgD~~~Di~~A-~~---~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGA-KK---FGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHH-HH---CCCcEEEecCC
Confidence 999999999999 99 99999999754
No 37
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.75 E-value=3e-18 Score=139.80 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=91.4
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCC-ChHHHHHHHHHhcCCC---------CCCceEEcCC--CCCh--HHHHHH
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTK-QSRFADALLRELAGVT---------IPPDRIYGLG--TGPK--VEVLKQ 147 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk-~~~~~~~iL~~~~gl~---------~~Fd~I~g~d--~kpk--Pe~l~~ 147 (218)
.....+||||.++|+ ++|++++|+||+ ....++.+|+. +|+. .+|+.+++++ .++| |++++.
T Consensus 41 ~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~-~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~ 119 (174)
T TIGR01685 41 GTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT-FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQK 119 (174)
T ss_pred CCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh-CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHH
Confidence 445789999999999 899999999998 88999999999 9999 9999999886 2334 445666
Q ss_pred HHhcC--CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHH
Q 027821 148 LQKKP--ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKER 196 (218)
Q Consensus 148 l~~~~--~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l 196 (218)
+.... ++++.+|+||||++.|+++| ++ +|+++++|.||+.-.+.+
T Consensus 120 ~~~~~~~gl~p~e~l~VgDs~~di~aA-~~---aGi~~i~v~~g~~~~~~~ 166 (174)
T TIGR01685 120 VNKVDPSVLKPAQILFFDDRTDNVREV-WG---YGVTSCYCPSGMDKGTFK 166 (174)
T ss_pred hhhcccCCCCHHHeEEEcChhHhHHHH-HH---hCCEEEEcCCCccHHHHH
Confidence 76665 57889999999999999999 99 999999999998655543
No 38
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.74 E-value=1.7e-17 Score=136.96 Aligned_cols=105 Identities=11% Similarity=0.145 Sum_probs=93.0
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
.++||+.++|+ ++|++++|+||++.......+.++.++..+||.|++++ .||+|++++.++++.++++.+|+|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 58999999999 78999999999998887777765248899999998875 689999999999999999999999
Q ss_pred EcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
|||+..|+++| ++ +|++++++.++..-.+.++
T Consensus 164 vgD~~~di~aA-~~---aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 164 FDDNADNIEAA-NA---LGITSILVTDKQTIPDYFA 195 (199)
T ss_pred eCCCHHHHHHH-HH---cCCEEEEecCCccHHHHHH
Confidence 99999999999 99 9999999988766665554
No 39
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.73 E-value=8.7e-18 Score=139.46 Aligned_cols=106 Identities=13% Similarity=0.088 Sum_probs=90.1
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHH--HHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRF--ADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~--~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
...+|||+.++|+ ++|++++|+||+.... ....+.+ .++..+||.|++++ .||+|+++..++.+.++++.
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~-~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLP-GDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhh-hhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 4679999999999 7899999999987643 4444556 78999999998775 58999999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
+|+||||+..|+++| ++ +||++|+|.++....+.|.
T Consensus 171 ~~l~i~D~~~di~aA-~~---aG~~~i~v~~~~~~~~~l~ 206 (211)
T TIGR02247 171 ECVFLDDLGSNLKPA-AA---LGITTIKVSDEEQAIHDLE 206 (211)
T ss_pred HeEEEcCCHHHHHHH-HH---cCCEEEEECCHHHHHHHHH
Confidence 999999999999999 99 9999999987655555444
No 40
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.73 E-value=2.4e-17 Score=130.33 Aligned_cols=96 Identities=19% Similarity=0.249 Sum_probs=89.5
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCc
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e 158 (218)
...+++||+.++|+ ++|++++|+||.+.+.++..+++ +|+..+|+.+++++ .||+|++++.++++.++++.+
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~-~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLER-LGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHH-TTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccc-cccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 34689999999999 69999999999999999999999 99999999998775 579999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
|+||||+..|+++| ++ +|+++|+|
T Consensus 153 ~~~vgD~~~d~~~A-~~---~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDSPSDVEAA-KE---AGIKTIWV 176 (176)
T ss_dssp EEEEESSHHHHHHH-HH---TTSEEEEE
T ss_pred EEEEeCCHHHHHHH-HH---cCCeEEeC
Confidence 99999999999999 99 99999986
No 41
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.72 E-value=2.4e-17 Score=134.17 Aligned_cols=95 Identities=17% Similarity=0.173 Sum_probs=86.5
Q ss_pred cCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---C-----CChHHHHHHHHhcCCCCCCc
Q 027821 87 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---T-----GPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 87 ~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~-----kpkPe~l~~l~~~~~~~~~e 158 (218)
..+++||+.++|+....+++|+||+++..+...|++ +|+..+||.|++++ . ||+|++++.++++.++++.+
T Consensus 82 ~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~-~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 82 KLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNR-LGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred hCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHH-cCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 467999999999933368999999999999999999 99999999998875 2 89999999999999999999
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
|+||||+..|+++| ++ +|+++|+|
T Consensus 161 ~l~vgD~~~di~aA-~~---~G~~~i~v 184 (184)
T TIGR01993 161 AIFFDDSARNIAAA-KA---LGMKTVLV 184 (184)
T ss_pred eEEEeCCHHHHHHH-HH---cCCEEeeC
Confidence 99999999999999 99 99999875
No 42
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.72 E-value=2.9e-17 Score=135.38 Aligned_cols=109 Identities=15% Similarity=0.238 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---
Q 027821 64 ALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--- 137 (218)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--- 137 (218)
.+.+..+.+.+++... ....+|||+.++|+ ++|++++|+||+... +...|++ +|+..+||.|++++
T Consensus 86 ~~~~~~~~~~~~~~~~------~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~-~~l~~~fd~i~~s~~~~ 157 (203)
T TIGR02252 86 SFEKIFEELYSYFATP------EPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEA-LGLLEYFDFVVTSYEVG 157 (203)
T ss_pred hHHHHHHHHHHHhcCC------CcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHH-CCcHHhcceEEeecccC
Confidence 3444555555544221 23479999999999 689999999999875 5788999 99999999998875
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEE
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i 184 (218)
.||+|+++..++.+.++++.+|+||||+. +|+++| ++ +|+++|
T Consensus 158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A-~~---aG~~~i 202 (203)
T TIGR02252 158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGA-RA---AGWRAL 202 (203)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHH-HH---cCCeee
Confidence 57999999999999999999999999997 899999 99 999987
No 43
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.72 E-value=5.9e-17 Score=130.38 Aligned_cols=93 Identities=22% Similarity=0.251 Sum_probs=85.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
.+++||+.++|+ ++|++++|+||+.... ..++.+ +|+..+|+.|++++ .||+|+++..++++.++++.+|+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~-~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQE-LGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHh-cCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 689999999999 7899999999999988 888888 99999999988764 57999999999999998999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEE
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
||||+..|+++| ++ +|+++|+|
T Consensus 162 ~vgD~~~di~aA-~~---~G~~~i~v 183 (183)
T TIGR01509 162 FVDDSPAGIEAA-KA---AGMHTVLV 183 (183)
T ss_pred EEcCCHHHHHHH-HH---cCCEEEeC
Confidence 999999999999 99 99999975
No 44
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.71 E-value=2.8e-17 Score=132.55 Aligned_cols=101 Identities=20% Similarity=0.197 Sum_probs=87.7
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCC---------------hHHHHHHHHHhcCCCCCCceE-Ec----CC----
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQ---------------SRFADALLRELAGVTIPPDRI-YG----LG---- 137 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~---------------~~~~~~iL~~~~gl~~~Fd~I-~g----~d---- 137 (218)
....++||||.++|+ ++|++++|+||++ ...+..+|++ +|+. |+.+ +| ++
T Consensus 25 ~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~-~gl~--fd~ii~~~~~~~~~~~~ 101 (161)
T TIGR01261 25 LEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRS-QGII--FDDVLICPHFPDDNCDC 101 (161)
T ss_pred HHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH-CCCc--eeEEEECCCCCCCCCCC
Confidence 345689999999999 7899999999983 5678999999 9997 7654 55 33
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
+||+|+++..+..++++++++++||||+..|+++| ++ +|+++++|.+|--.
T Consensus 102 ~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A-~~---aGi~~i~~~~~~~~ 152 (161)
T TIGR01261 102 RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLA-EN---LGIRGIQYDEEELN 152 (161)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHH-HH---CCCeEEEEChhhcC
Confidence 68999999999999988999999999999999999 99 99999999887543
No 45
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.70 E-value=7.6e-17 Score=137.55 Aligned_cols=110 Identities=9% Similarity=-0.049 Sum_probs=90.1
Q ss_pred HHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCC----ChHHHHHHHHHhcCCCCCCceEEcCC--CCCh
Q 027821 71 KVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTK----QSRFADALLRELAGVTIPPDRIYGLG--TGPK 141 (218)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk----~~~~~~~iL~~~~gl~~~Fd~I~g~d--~kpk 141 (218)
.+++.|.+.. .....+++++.++|+ ++|++++||||+ .+..++.++++ +|+..+|+.|++++ .++|
T Consensus 100 ~~w~~~~~~~----~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~-lGi~~~f~~i~~~d~~~~~K 174 (237)
T TIGR01672 100 VFWEKVNNGW----DEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKN-FHIPAMNPVIFAGDKPGQYQ 174 (237)
T ss_pred HHHHHHHHhc----ccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHH-hCCchheeEEECCCCCCCCC
Confidence 3566664443 556788999999999 899999999998 77789999999 99999999999987 3356
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
|+... ++.++++ ++||||+.+|+.+| ++ ||+++|+|.||+++..
T Consensus 175 p~~~~-~l~~~~i----~i~vGDs~~DI~aA-k~---AGi~~I~V~~g~~s~~ 218 (237)
T TIGR01672 175 YTKTQ-WIQDKNI----RIHYGDSDNDITAA-KE---AGARGIRILRASNSTY 218 (237)
T ss_pred CCHHH-HHHhCCC----eEEEeCCHHHHHHH-HH---CCCCEEEEEecCCCCC
Confidence 66553 4445553 58999999999999 99 9999999999998764
No 46
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.70 E-value=2.4e-16 Score=133.17 Aligned_cols=117 Identities=14% Similarity=0.136 Sum_probs=96.7
Q ss_pred HHHHHH-HHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhc---CCCCCCceEEcCC-
Q 027821 66 VDLFGK-VRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELA---GVTIPPDRIYGLG- 137 (218)
Q Consensus 66 ~~~~~~-~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~---gl~~~Fd~I~g~d- 137 (218)
.++... |++.|.+ . .....+|||+.++|+ ++|++++|+||++....+.++++ . ++..+|+.++...
T Consensus 76 k~lqg~iw~~~Y~~-~----~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~-~~~~~L~~~f~~~fd~~~ 149 (220)
T TIGR01691 76 KTLQGLIWRQGYES-G----ELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH-SDAGNLTPYFSGYFDTTV 149 (220)
T ss_pred HHHHHHHHHHHHhc-C----CcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh-ccccchhhhcceEEEeCc
Confidence 444444 6666633 3 455689999999999 88999999999999998888888 6 5667777665432
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
.||+|+++.+++++.++++.+|+||||+..|+++| ++ |||++++|.++.+.
T Consensus 150 g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA-~~---AG~~ti~v~r~g~~ 201 (220)
T TIGR01691 150 GLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAA-RK---AGLHTGQLVRPGND 201 (220)
T ss_pred ccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHH-HH---cCCEEEEEECCCCC
Confidence 68999999999999999999999999999999999 99 99999999887533
No 47
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.66 E-value=2.2e-16 Score=124.93 Aligned_cols=97 Identities=24% Similarity=0.213 Sum_probs=81.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCC--CceEEc-CC----CCChH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIP--PDRIYG-LG----TGPKV 142 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~--Fd~I~g-~d----~kpkP 142 (218)
.++|||+.++|+ ++|++++|+||+++ ..+..+|++ +|+... |..+.+ ++ .||+|
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ-LGVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh-CCCceeEEEECCCCCCCCCCCCCCCH
Confidence 478999999999 89999999999984 567888999 998732 221211 22 58999
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 143 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
++++.++.+.++++.+|+||||+..|+++| ++ +||++|++.-|
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A-~~---~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAA-RN---AGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHH-HH---CCCCEEEecCC
Confidence 999999999999999999999999999999 99 99999998654
No 48
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.65 E-value=8.7e-16 Score=126.51 Aligned_cols=85 Identities=16% Similarity=0.115 Sum_probs=77.7
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---CCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---TGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
.+.+++.++|+ ++|++++|+||+++..++.+|++ +|+..+|+.+++++ .||+|+++..+++..++++.+|+||
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTT-HGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHH-cCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEE
Confidence 45666799999 78999999999999999999999 99999999998876 4799999999999998889999999
Q ss_pred cCChhhHHHhhcc
Q 027821 163 EDRLATLKNVIKE 175 (218)
Q Consensus 163 GDs~~Di~aA~k~ 175 (218)
||+.+|+++| ++
T Consensus 185 GD~~~Di~aA-~~ 196 (197)
T TIGR01548 185 GDTVDDIITG-RK 196 (197)
T ss_pred eCCHHHHHHH-Hh
Confidence 9999999999 76
No 49
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.63 E-value=8.6e-16 Score=124.59 Aligned_cols=100 Identities=19% Similarity=0.243 Sum_probs=87.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCC-hHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQ-SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~-~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+|||+.++|+ ++|++++|+||++ ...+..++++ +|+..++ ...||+|+++..++++.++++.+++|||
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~-~gl~~~~-----~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA-LGIPVLP-----HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH-cCCEEEc-----CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 479999999999 7899999999999 6778888888 8876432 2368999999999999998899999999
Q ss_pred CCh-hhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 164 DRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 164 Ds~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
|+. .|+++| ++ +|+++|+|.||+++.+.+.
T Consensus 116 Ds~~~Di~aA-~~---aGi~~i~v~~g~~~~~~~~ 146 (170)
T TIGR01668 116 DRLFTDVMGG-NR---NGSYTILVEPLVHPDQWFI 146 (170)
T ss_pred CcchHHHHHH-HH---cCCeEEEEccCcCCccccc
Confidence 998 699999 99 9999999999998876543
No 50
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.63 E-value=2.2e-15 Score=128.51 Aligned_cols=108 Identities=12% Similarity=0.008 Sum_probs=86.1
Q ss_pred HHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCC----ChHHHHHHHHHhcCC--CCCCceEEcCCC--C
Q 027821 71 KVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTK----QSRFADALLRELAGV--TIPPDRIYGLGT--G 139 (218)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk----~~~~~~~iL~~~~gl--~~~Fd~I~g~d~--k 139 (218)
.|++.|.+.. .....|+||+.++|+ ++|+++++|||+ ....++.++++ +|+ .++|+.+++.+. |
T Consensus 100 ~fw~~y~~~~----~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~-~gip~~~~f~vil~gd~~~K 174 (237)
T PRK11009 100 KFWEKMNNGW----DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADD-FHIPADNMNPVIFAGDKPGQ 174 (237)
T ss_pred HHHHHHHhcc----cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHH-cCCCcccceeEEEcCCCCCC
Confidence 4566664443 556889999999999 899999999995 46688888998 999 899999998873 4
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
+++. . .+.++++ ++||||+.+|+.+| ++ ||+++|+|.||+++.-
T Consensus 175 ~~K~--~-~l~~~~i----~I~IGDs~~Di~aA-~~---AGi~~I~v~~G~~~~~ 218 (237)
T PRK11009 175 YTKT--Q-WLKKKNI----RIFYGDSDNDITAA-RE---AGARGIRILRAANSTY 218 (237)
T ss_pred CCHH--H-HHHhcCC----eEEEcCCHHHHHHH-HH---cCCcEEEEecCCCCCC
Confidence 4433 2 2234442 58999999999999 99 9999999999998653
No 51
>PLN02954 phosphoserine phosphatase
Probab=99.63 E-value=8.6e-15 Score=122.38 Aligned_cols=120 Identities=23% Similarity=0.355 Sum_probs=94.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC--CCCce---------EEcCC-------CCChHHHHH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT--IPPDR---------IYGLG-------TGPKVEVLK 146 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~--~~Fd~---------I~g~d-------~kpkPe~l~ 146 (218)
.+++||+.++|+ ++|++++|+||+.+..++.++++ +|+. .+|+. +.|.+ .++||++++
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~-~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAI-LGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-hCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 468999999999 88999999999999999999999 9997 35642 22221 247999999
Q ss_pred HHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 147 QLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 147 ~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
++....+ ..+++||||+.+|+.+| ++ +|+.++.+ ||.....+.....++ ++++++.||..++
T Consensus 162 ~~~~~~~--~~~~i~iGDs~~Di~aa-~~---~~~~~~~~-~~~~~~~~~~~~~~~--~~i~~~~el~~~~ 223 (224)
T PLN02954 162 HIKKKHG--YKTMVMIGDGATDLEAR-KP---GGADLFIG-YGGVQVREAVAAKAD--WFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHcC--CCceEEEeCCHHHHHhh-hc---CCCCEEEe-cCCCccCHHHHhcCC--EEECCHHHHHHhh
Confidence 8888765 35789999999999999 98 88877654 564433333344555 9999999998765
No 52
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.62 E-value=1.6e-15 Score=117.18 Aligned_cols=95 Identities=28% Similarity=0.324 Sum_probs=82.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCC--------hHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcC-CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQ--------SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKP-ELQ 155 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~--------~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~-~~~ 155 (218)
..+|||+.++|+ ++|++++|+||+. .+.+...+++ +|+..++..+.+...||+|+++..++.+. +++
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-LGVPIDVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 578999999999 8999999999999 8889999999 99974333322312689999999999999 589
Q ss_pred CCcEEEEcC-ChhhHHHhhccCccCCceEEEEe
Q 027821 156 GMTLHFVED-RLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 156 ~~e~l~IGD-s~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+.+++|||| +..|+.+| ++ +|+++|+|.
T Consensus 103 ~~~~v~IGD~~~~Di~~A-~~---~Gi~~i~~~ 131 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQAA-KR---AGLAFILVA 131 (132)
T ss_pred hhheEEEcCCCcccHHHH-HH---CCCeEEEee
Confidence 999999999 79999999 99 999999884
No 53
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.62 E-value=3.2e-15 Score=124.70 Aligned_cols=123 Identities=20% Similarity=0.182 Sum_probs=104.1
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
..+++|++.++|+ ...++++|+||.........|++ +||.++||.|+.++ .||.|++++.+++..++++++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~-~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQ-LGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHH-cCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 3679999999999 33388999999999999999999 99999999998876 57999999999999999999999
Q ss_pred EEcCChhhH-HHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATL-KNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di-~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||+..+. .+| ++ +||++|.+..+.... ......|++.+.++.++...+
T Consensus 176 ~VgD~~~~di~gA-~~---~G~~~vwi~~~~~~~---~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 176 FVGDSLENDILGA-RA---LGMKTVWINRGGKPL---PDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred EECCChhhhhHHH-Hh---cCcEEEEECCCCCCC---CCCccCCceEEcCHHHHHHHH
Confidence 999998777 999 99 999999887665433 112235669999999998765
No 54
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.62 E-value=9.6e-16 Score=133.85 Aligned_cols=98 Identities=16% Similarity=0.077 Sum_probs=88.0
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC-CCceEEcCC-----------CCChHHHHHHHHhcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLG-----------TGPKVEVLKQLQKKP 152 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd~I~g~d-----------~kpkPe~l~~l~~~~ 152 (218)
..++||+.++|+ ++|++++|+||++....+.++++ +|+.. +|+.++|.+ .||+|+++..++.+.
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~-l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~ 264 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEW-LRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEK 264 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHH-HHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHH
Confidence 468999999999 88999999999999999999999 99996 999998865 368899998888776
Q ss_pred CC-CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 153 EL-QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 153 ~~-~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
.. .+.+|+||||+.+|+++| ++ +||++|+|.||-
T Consensus 265 ~~~~~~~~~~vgD~~~d~~~a-~~---~Gi~~i~v~~g~ 299 (300)
T PHA02530 265 IAPKYDVLLAVDDRDQVVDMW-RR---IGLECWQVAPGD 299 (300)
T ss_pred hccCceEEEEEcCcHHHHHHH-HH---hCCeEEEecCCC
Confidence 55 458899999999999999 99 999999999983
No 55
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.61 E-value=1.4e-16 Score=138.55 Aligned_cols=119 Identities=15% Similarity=0.131 Sum_probs=96.6
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHH-HHHHHHhcCCCCCCceEEc---CC----CCChHHHHHHHHhcCCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFA-DALLRELAGVTIPPDRIYG---LG----TGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~-~~iL~~~~gl~~~Fd~I~g---~d----~kpkPe~l~~l~~~~~~~~~ 157 (218)
..|+|+.++|+ ++|. ++|+||++.... ...+.. .|+..+|+.+.+ .+ .||+|+++..++...+.+++
T Consensus 143 ~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~-~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~ 220 (279)
T TIGR01452 143 FSYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRT-PGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPA 220 (279)
T ss_pred CCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcc-cChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChh
Confidence 35899999999 4676 899999997543 223445 677778877643 33 47999999999999988999
Q ss_pred cEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhc------cCCCCeEEcChhHH
Q 027821 158 TLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA------ASIPRIQLLQLSDF 213 (218)
Q Consensus 158 e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a------~~~p~~~~~~~~~l 213 (218)
+++||||+ .+||++| ++ +|+++|+|.||+++.++++.+ ...|+++++++.||
T Consensus 221 ~~lmIGD~~~tDI~~A-~~---aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 221 RTLMVGDRLETDILFG-HR---CGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hEEEECCChHHHHHHH-HH---cCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999 4999999 99 999999999999999888643 24577999999875
No 56
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.61 E-value=2.1e-16 Score=136.22 Aligned_cols=123 Identities=10% Similarity=0.009 Sum_probs=103.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-------CCChHHHHHHHHhcCCCCCCcE
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-------TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-------~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
.|+++.++++ +.+.+++|+||+++......+.. +|+..+|+.+.+.. .||+|+++..++.+.+.++.++
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 199 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLA-LDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEA 199 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCC-CCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhE
Confidence 4778888888 67889999999999888888888 89999999876542 4799999999999988899999
Q ss_pred EEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 160 HFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 160 l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+||||+. +|+.+| ++ +|+++++|.||.....+.+.....|+++++++.|+..++
T Consensus 200 ~~vGD~~~~Di~~a-~~---~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 200 VMIGDDCRDDVGGA-QD---CGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred EEECCCcHHHHHHH-HH---cCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 9999996 999999 99 999999999997655544333445669999999998764
No 57
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.60 E-value=1.3e-14 Score=114.40 Aligned_cols=88 Identities=23% Similarity=0.295 Sum_probs=80.3
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
.....+||+.++|+ ++|++++|+||+.+..+...+++ + +..+|+.|++++ .||+|+++.+++.+.++++ +|
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~ 137 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRK-H-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EV 137 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHH-H-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CE
Confidence 34567899999999 78999999999999999999999 7 999999998876 5799999999999999888 99
Q ss_pred EEEcCChhhHHHhhccCccCC
Q 027821 160 HFVEDRLATLKNVIKEPELDG 180 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AG 180 (218)
+||||+..|+++| ++ +|
T Consensus 138 l~iGDs~~Di~aa-~~---aG 154 (154)
T TIGR01549 138 LHVGDNLNDIEGA-RN---AG 154 (154)
T ss_pred EEEeCCHHHHHHH-HH---cc
Confidence 9999999999999 88 76
No 58
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.57 E-value=6.6e-15 Score=119.20 Aligned_cols=88 Identities=24% Similarity=0.311 Sum_probs=75.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChH------------HHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHh
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSR------------FADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQK 150 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~------------~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~ 150 (218)
+|||+.++|+ ++|++++|+||++.. .++.+|++ +|+.. +.+++++ +||+|++++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~-~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK-LKVPI--QVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH-cCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence 7999999999 899999999999873 57889999 99953 4454443 5799999999999
Q ss_pred cCC--CCCCcEEEEcCCh--------hhHHHhhccCccCCceEE
Q 027821 151 KPE--LQGMTLHFVEDRL--------ATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 151 ~~~--~~~~e~l~IGDs~--------~Di~aA~k~~~~AGv~~i 184 (218)
+.+ +++.+++||||+. .|+++| ++ +|++++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA-~~---aGi~~~ 159 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFA-KN---LGLEFK 159 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHH-HH---CCCCcC
Confidence 887 7889999999996 699999 99 999886
No 59
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.53 E-value=1e-14 Score=117.41 Aligned_cols=83 Identities=18% Similarity=0.196 Sum_probs=76.6
Q ss_pred cCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 87 ANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 87 ~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
...++||+.++|+ +++|+||++...++..+++ +|+..+||.|++++ .||+|+++..++.+.++++.+|+||
T Consensus 88 ~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~-~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 88 NLPPWPDSAAALA----RVAILSNASHWAFDQFAQQ-AGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred cCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHH-CCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 3569999999996 5999999999999999999 99999999998886 5799999999999999999999999
Q ss_pred cCChhhHHHhhcc
Q 027821 163 EDRLATLKNVIKE 175 (218)
Q Consensus 163 GDs~~Di~aA~k~ 175 (218)
||+..|+.+| ++
T Consensus 163 gD~~~Di~~A-~~ 174 (175)
T TIGR01493 163 AAHQWDLIGA-RK 174 (175)
T ss_pred ecChhhHHHH-hc
Confidence 9999999999 75
No 60
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.53 E-value=9.2e-14 Score=124.81 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=84.1
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCC---------------ChHHHHHHHHHhcCCCCCCceE-EcC----C----
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTK---------------QSRFADALLRELAGVTIPPDRI-YGL----G---- 137 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk---------------~~~~~~~iL~~~~gl~~~Fd~I-~g~----d---- 137 (218)
.....+|||+.++|+ ++|++++|+||+ ....+..+++. +|+. |+.+ ++. +
T Consensus 26 ~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~-~gl~--fd~i~i~~~~~sd~~~~ 102 (354)
T PRK05446 26 LDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFES-QGIK--FDEVLICPHFPEDNCSC 102 (354)
T ss_pred cccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHH-cCCc--eeeEEEeCCcCcccCCC
Confidence 556789999999999 789999999996 35678888999 9984 7665 442 2
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
+||+|+++..+..+.++++.+++||||+.+|+++| ++ +||++|+|+-.
T Consensus 103 rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aA-k~---aGi~~I~v~~~ 150 (354)
T PRK05446 103 RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLA-EN---MGIKGIRYARE 150 (354)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHH-HH---CCCeEEEEECC
Confidence 68999999998888888899999999999999999 99 99999999443
No 61
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.51 E-value=2.7e-14 Score=100.64 Aligned_cols=72 Identities=19% Similarity=0.188 Sum_probs=66.4
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCC-hhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDR-LATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
+||+|.++..++..+++++.+++||||+ ..||++| ++ +|+.+|+|.+|..+.+.+......|+++++++.|+
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a-~~---~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAA-KA---AGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHH-HH---TTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHH-HH---cCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 5899999999999999899999999999 9999999 99 99999999999999888876667788999999885
No 62
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.50 E-value=1.2e-13 Score=115.09 Aligned_cols=118 Identities=16% Similarity=0.154 Sum_probs=92.4
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceE------------EcCC--CCChHHHHHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRI------------YGLG--TGPKVEVLKQLQ 149 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I------------~g~d--~kpkPe~l~~l~ 149 (218)
..+++||+.++|+ ++|++++|+||.....++.++++ +|+..+|+.. .+.. .+|||++++.++
T Consensus 83 ~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 161 (219)
T TIGR00338 83 NLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDK-LGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILL 161 (219)
T ss_pred cCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHH
Confidence 3579999999999 78999999999999999999999 9999888532 1111 347999999999
Q ss_pred hcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHHhhc
Q 027821 150 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRKL 217 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~~~~ 217 (218)
.+.++++.+|+||||+.+|+.+| ++ +|+.+ + |+ ..+.+.. .++ +++. ++.++...|
T Consensus 162 ~~~~~~~~~~i~iGDs~~Di~aa-~~---ag~~i-~--~~--~~~~~~~-~a~--~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 162 RKEGISPENTVAVGDGANDLSMI-KA---AGLGI-A--FN--AKPKLQQ-KAD--ICINKKDLTDILPLL 219 (219)
T ss_pred HHcCCCHHHEEEEECCHHHHHHH-Hh---CCCeE-E--eC--CCHHHHH-hch--hccCCCCHHHHHhhC
Confidence 99988899999999999999999 99 99974 2 33 2233433 335 7766 567776543
No 63
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.49 E-value=2.8e-14 Score=113.20 Aligned_cols=91 Identities=13% Similarity=-0.029 Sum_probs=78.0
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCC-CCceEEcCC--CCChHHHHHHHHhcCCCCCCcEEE
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLG--TGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd~I~g~d--~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
...++||+.++|+ +++++++|+||+.++.++.+|++ +|+.. +|+.|++++ ...||. +.+.+...+.++.+|+|
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~-l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~ 120 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL-LDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVII 120 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH-hCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEE
Confidence 3578999999999 77899999999999999999999 99965 569998886 335565 76666777778999999
Q ss_pred EcCChhhHHHhhccCccCCceE
Q 027821 162 VEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~ 183 (218)
|||++.|+++| ++ +|+.+
T Consensus 121 i~Ds~~~~~aa-~~---ngI~i 138 (148)
T smart00577 121 IDDSPDSWPFH-PE---NLIPI 138 (148)
T ss_pred EECCHHHhhcC-cc---CEEEe
Confidence 99999999999 98 88765
No 64
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.49 E-value=3.5e-14 Score=110.14 Aligned_cols=83 Identities=20% Similarity=0.110 Sum_probs=77.5
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCC-ChHHHHHHHHHhcC-------CCCCCceEEcCCCCChHHHHHHHHhcCC--CC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTK-QSRFADALLRELAG-------VTIPPDRIYGLGTGPKVEVLKQLQKKPE--LQ 155 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk-~~~~~~~iL~~~~g-------l~~~Fd~I~g~d~kpkPe~l~~l~~~~~--~~ 155 (218)
++|||+.++|+ ++|++++|+||+ ..+.+..++++ ++ +.++|+.+++++.+|||+++..++.+.+ ++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~-~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~ 107 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI-FEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLK 107 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh-ccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCC
Confidence 48999999999 789999999999 88999999999 89 8999999999877899999999999999 99
Q ss_pred CCcEEEEcCChhhHHHh
Q 027821 156 GMTLHFVEDRLATLKNV 172 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA 172 (218)
+.+|+||||+..|+++.
T Consensus 108 p~~~l~igDs~~n~~~~ 124 (128)
T TIGR01681 108 PKSILFVDDRPDNNEEV 124 (128)
T ss_pred cceEEEECCCHhHHHHH
Confidence 99999999999999877
No 65
>PLN02645 phosphoglycolate phosphatase
Probab=99.49 E-value=1.9e-14 Score=127.21 Aligned_cols=112 Identities=18% Similarity=0.154 Sum_probs=93.2
Q ss_pred CCcEEEEcCCChHH-HHHHHHHhcCCCCCCceEEcCC-------CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHh
Q 027821 102 SSRIYIVTTKQSRF-ADALLRELAGVTIPPDRIYGLG-------TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNV 172 (218)
Q Consensus 102 g~~laIvTnk~~~~-~~~iL~~~~gl~~~Fd~I~g~d-------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA 172 (218)
+--++|+||++... ....+.. .|+..+|+.+.+.+ .||+|+++..++...++++.+++||||+. +||++|
T Consensus 186 ~g~~~i~tn~d~~~~~~~~~~~-~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A 264 (311)
T PLN02645 186 PGCLFIATNRDAVTHLTDAQEW-AGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFG 264 (311)
T ss_pred CCCEEEEeCCCCCCCCCCCCCc-cchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHH
Confidence 34699999999754 3455566 78888999886653 27999999999998888999999999997 999999
Q ss_pred hccCccCCceEEEEecCCCCHHHHHhc--cCCCCeEEcChhHHHhhcC
Q 027821 173 IKEPELDGWNLYLGDWGYNTQKEREEA--ASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 173 ~k~~~~AGv~~i~V~~G~~~~~~l~~a--~~~p~~~~~~~~~l~~~~~ 218 (218)
++ +|+++|+|.||+++.+++... ...|+++++++.+|..+++
T Consensus 265 -~~---aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 265 -QN---GGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred -HH---cCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHhh
Confidence 99 999999999999998887552 2456799999999988753
No 66
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.48 E-value=1.2e-13 Score=113.87 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=83.1
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE---------cCC-CC--ChHHHHHHHHh
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY---------GLG-TG--PKVEVLKQLQK 150 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~---------g~d-~k--pkPe~l~~l~~ 150 (218)
....+|||+.++|+ ++ ++++|+||+....++.++++ +|+..+|+..+ +.+ .+ +|+..+..+..
T Consensus 65 ~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~-~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~ 142 (205)
T PRK13582 65 ATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQ-LGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKS 142 (205)
T ss_pred HhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHH-cCCchhhcceEEECCCCeEECccccccchHHHHHHHHHH
Confidence 34678999999999 55 99999999999999999999 99998886532 222 12 23334444443
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCe-EEcChhHHHhhc
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRI-QLLQLSDFSRKL 217 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~-~~~~~~~l~~~~ 217 (218)
...+|+||||+.+|+.+| ++ +|+. |.|+.. .. .....++ + +++++.||...+
T Consensus 143 ----~~~~~v~iGDs~~D~~~~-~a---a~~~---v~~~~~-~~-~~~~~~~--~~~~~~~~el~~~l 195 (205)
T PRK13582 143 ----LGYRVIAAGDSYNDTTML-GE---ADAG---ILFRPP-AN-VIAEFPQ--FPAVHTYDELLAAI 195 (205)
T ss_pred ----hCCeEEEEeCCHHHHHHH-Hh---CCCC---EEECCC-HH-HHHhCCc--ccccCCHHHHHHHH
Confidence 345789999999999999 99 8873 445542 22 3333333 5 899999998765
No 67
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.48 E-value=4.4e-13 Score=113.18 Aligned_cols=122 Identities=12% Similarity=0.074 Sum_probs=100.1
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcC-CCCCCceEEcC-C-----CCChHHHHHHHHhcCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAG-VTIPPDRIYGL-G-----TGPKVEVLKQLQKKPEL 154 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~g-l~~~Fd~I~g~-d-----~kpkPe~l~~l~~~~~~ 154 (218)
.....++||+.++++ ..|++++++||+.+...+.-+++ ++ +...|+.++.. + .||+|+++..+...++.
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~-~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~ 166 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISR-HEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV 166 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHH-hhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence 456789999999999 89999999999999999999988 76 77778776543 2 46999999888888887
Q ss_pred CC-CcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 155 QG-MTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 155 ~~-~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.+ +.|++++|++.+++|| ++ |||++|+|.. .....+....++ +++++++++..
T Consensus 167 ~~~~k~lVfeds~~Gv~aa-~a---agm~vi~v~~--~~~~~~~~~~~~--~~~~~~~~~~~ 220 (222)
T KOG2914|consen 167 PPPSKCLVFEDSPVGVQAA-KA---AGMQVVGVAT--PDLSNLFSAGAT--LILESLEDFKP 220 (222)
T ss_pred CCccceEEECCCHHHHHHH-Hh---cCCeEEEecC--CCcchhhhhccc--eecccccccCc
Confidence 77 9999999999999999 99 9999999976 222333344445 88988887654
No 68
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.43 E-value=7.4e-13 Score=99.80 Aligned_cols=95 Identities=23% Similarity=0.209 Sum_probs=85.5
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----C----------------CChHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----T----------------GPKVE 143 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~----------------kpkPe 143 (218)
...++||+.++|+ ++|++++|+||+.+..++..++. +|+..+|+.+++.+ . +|+++
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEE-LGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHH-cCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 3589999999999 78999999999999999999999 99999999888765 2 78899
Q ss_pred HHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 144 VLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.+..+....+....++++|||+.+|+++| ++ +|+++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~-~~---~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMA-KA---AGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHH-HH---cCCceeeC
Confidence 99888888877778999999999999999 98 89998875
No 69
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.41 E-value=1.2e-12 Score=109.78 Aligned_cols=120 Identities=15% Similarity=0.107 Sum_probs=84.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC--CC--ceEEcCC----CCChHHHH----------
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI--PP--DRIYGLG----TGPKVEVL---------- 145 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~--~F--d~I~g~d----~kpkPe~l---------- 145 (218)
...++||+.++|+ ++|++++|+||+....++.+|++ + +.. .+ +..++.+ .+|+|+..
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K 149 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQG-L-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCK 149 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHH-h-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCch
Confidence 4679999999999 89999999999999999999999 7 643 22 2233333 34555431
Q ss_pred HHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 146 KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
..++...+.++.+|+||||+.+|+.+| ++ ||+.++ . + ...........|.+.+++..|+...|
T Consensus 150 ~~~l~~~~~~~~~~i~iGDs~~Di~aa-~~---Ag~~~a--~-~--~l~~~~~~~~~~~~~~~~f~ei~~~l 212 (219)
T PRK09552 150 PSLIRKLSDTNDFHIVIGDSITDLEAA-KQ---ADKVFA--R-D--FLITKCEELGIPYTPFETFHDVQTEL 212 (219)
T ss_pred HHHHHHhccCCCCEEEEeCCHHHHHHH-HH---CCccee--H-H--HHHHHHHHcCCCccccCCHHHHHHHH
Confidence 234444444667889999999999999 99 999333 1 2 11111112445668899999997765
No 70
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.40 E-value=4.3e-12 Score=108.83 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=63.7
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDF 213 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l 213 (218)
.||+|++++.+++..++++.+++||||+. +|+.+| ++ +|+++++|.||+...+++......|+++++++.|+
T Consensus 177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a-~~---~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAG-ID---AGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHH-HH---cCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 36888999999999988999999999996 899999 99 99999999999998888766555677999999875
No 71
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.39 E-value=1.1e-12 Score=104.67 Aligned_cols=100 Identities=10% Similarity=0.040 Sum_probs=82.6
Q ss_pred HHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhc
Q 027821 95 PDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIK 174 (218)
Q Consensus 95 ~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k 174 (218)
.+.|+++|++++|+||++...+..++++ +|+..+|+. .+|||+++.+++.+.++++.+|+||||+.+|+.++ +
T Consensus 37 i~~Lk~~G~~i~IvTn~~~~~~~~~l~~-~gi~~~~~~-----~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~-~ 109 (154)
T TIGR01670 37 IRCALKSGIEVAIITGRKAKLVEDRCKT-LGITHLYQG-----QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVM-E 109 (154)
T ss_pred HHHHHHCCCEEEEEECCCCHHHHHHHHH-cCCCEEEec-----ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH-H
Confidence 4444488999999999999999999999 999988763 37999999999999988899999999999999999 9
Q ss_pred cCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 175 EPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 175 ~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
+ +|+. +++.++. +.+.. .++ +++.++.
T Consensus 110 ~---ag~~-~~v~~~~---~~~~~-~a~--~i~~~~~ 136 (154)
T TIGR01670 110 K---VGLS-VAVADAH---PLLIP-RAD--YVTRIAG 136 (154)
T ss_pred H---CCCe-EecCCcC---HHHHH-hCC--EEecCCC
Confidence 9 9996 7776664 23332 334 8887764
No 72
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.38 E-value=1.1e-12 Score=107.17 Aligned_cols=97 Identities=12% Similarity=0.031 Sum_probs=80.7
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--C------------CChHHHHHHH
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--T------------GPKVEVLKQL 148 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--~------------kpkPe~l~~l 148 (218)
...+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.++..+ . .+|++.+.++
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEK-LNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-hCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 34579999999999 78999999999999999999999 99998887654332 1 1344678888
Q ss_pred HhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 149 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.++.++++.+++||||+.+|+.+| ++ ||+.++...
T Consensus 156 ~~~~~~~~~~~i~iGDs~~D~~~a-~~---ag~~~a~~~ 190 (201)
T TIGR01491 156 KRELNPSLTETVAVGDSKNDLPMF-EV---ADISISLGD 190 (201)
T ss_pred HHHhCCCHHHEEEEcCCHhHHHHH-Hh---cCCeEEECC
Confidence 888887888999999999999999 99 999776543
No 73
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.37 E-value=3.5e-12 Score=104.61 Aligned_cols=102 Identities=13% Similarity=0.149 Sum_probs=83.3
Q ss_pred HHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCc
Q 027821 98 LKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPE 177 (218)
Q Consensus 98 L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~ 177 (218)
|+++|++++|+||++...+..++++ +|+..+|+ | .++||+.+.+++++.++++.+++||||+.+|+.+| ++
T Consensus 60 L~~~Gi~v~I~T~~~~~~v~~~l~~-lgl~~~f~---g--~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a-~~-- 130 (183)
T PRK09484 60 LLTSGIEVAIITGRKSKLVEDRMTT-LGITHLYQ---G--QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVM-EK-- 130 (183)
T ss_pred HHHCCCEEEEEeCCCcHHHHHHHHH-cCCceeec---C--CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH-HH--
Confidence 3488999999999999999999999 99988876 2 34789999999999999999999999999999999 99
Q ss_pred cCCceEEEEecCCCCHHHHHhccCCCCeEEc------ChhHHHhh
Q 027821 178 LDGWNLYLGDWGYNTQKEREEAASIPRIQLL------QLSDFSRK 216 (218)
Q Consensus 178 ~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~------~~~~l~~~ 216 (218)
+|+.+ +|. +..++....++ +++. .+.|+.+.
T Consensus 131 -aG~~~-~v~----~~~~~~~~~a~--~v~~~~~g~g~~~el~~~ 167 (183)
T PRK09484 131 -VGLSV-AVA----DAHPLLLPRAD--YVTRIAGGRGAVREVCDL 167 (183)
T ss_pred -CCCeE-ecC----ChhHHHHHhCC--EEecCCCCCCHHHHHHHH
Confidence 99984 453 33344444555 8886 56776543
No 74
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.34 E-value=2e-12 Score=105.09 Aligned_cols=96 Identities=20% Similarity=0.231 Sum_probs=79.2
Q ss_pred HHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 96 DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 96 e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
..|+++|++++|+||++...++..+++ +|+..+|+.+ ||||++++.+++..++++.+++||||+.+|+.++ +.
T Consensus 44 ~~L~~~Gi~laIiT~k~~~~~~~~l~~-lgi~~~f~~~-----kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~-~~ 116 (169)
T TIGR02726 44 IVLQLCGIDVAIITSKKSGAVRHRAEE-LKIKRFHEGI-----KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMM-KR 116 (169)
T ss_pred HHHHHCCCEEEEEECCCcHHHHHHHHH-CCCcEEEecC-----CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHH-HH
Confidence 444489999999999999999999999 9999888854 7999999999999998899999999999999999 99
Q ss_pred CccCCceEEEEecCCCCHHHHHhccCCCCeEEc
Q 027821 176 PELDGWNLYLGDWGYNTQKEREEAASIPRIQLL 208 (218)
Q Consensus 176 ~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~ 208 (218)
+|+.++-. +..+.++.+ ++ ++..
T Consensus 117 ---ag~~~am~----nA~~~lk~~-A~--~I~~ 139 (169)
T TIGR02726 117 ---VGLAVAVG----DAVADVKEA-AA--YVTT 139 (169)
T ss_pred ---CCCeEECc----CchHHHHHh-CC--EEcC
Confidence 99766533 223455443 34 6654
No 75
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.30 E-value=9.8e-12 Score=100.43 Aligned_cols=88 Identities=15% Similarity=0.157 Sum_probs=75.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------------------------CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------------------TGP 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------------------------~kp 140 (218)
.+++||+.++|+ ++|++++|+||+....++.++++ +|+..+|+.|+|++ ..+
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~-~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEG-IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 579999999999 78999999999999999999999 99999999999742 126
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceE
Q 027821 141 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 141 kPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~ 183 (218)
|+++++++.... +.+++||||+.+|+.+| ++ |++-+
T Consensus 150 K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa-~~---~d~~~ 185 (188)
T TIGR01489 150 KGKVIHKLSEPK---YQHIIYIGDGVTDVCPA-KL---SDVVF 185 (188)
T ss_pred HHHHHHHHHhhc---CceEEEECCCcchhchH-hc---CCccc
Confidence 889998887763 45679999999999999 88 76543
No 76
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.23 E-value=3.7e-11 Score=112.95 Aligned_cols=85 Identities=25% Similarity=0.373 Sum_probs=75.0
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCCh------------HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHh
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQS------------RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQK 150 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~------------~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~ 150 (218)
+||||.++|+ +.|++++|+||+.. ..+..+|++ +|+. |+.++|.+ +||+|+++..++.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~-lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAK-LGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHH-cCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 6999999999 89999999999988 568899999 9985 89888765 6899999998888
Q ss_pred cCC----CCCCcEEEEcCChhhHHHhhccCccCCc
Q 027821 151 KPE----LQGMTLHFVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 151 ~~~----~~~~e~l~IGDs~~Di~aA~k~~~~AGv 181 (218)
+++ ++..+++||||+..|+++| ++ +|-
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g-~~---ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANG-KA---AGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHH-Hh---cCC
Confidence 773 6788999999999999998 87 664
No 77
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.22 E-value=9.4e-11 Score=96.03 Aligned_cols=118 Identities=23% Similarity=0.231 Sum_probs=91.6
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEE-cC--------CCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIY-GL--------GTG 139 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~-g~--------d~k 139 (218)
...+.||+.++|. +.|++++||||++. +.....|+. .|. -||.|+ |. ++|
T Consensus 29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~-~gv--~id~i~~Cph~p~~~c~cRK 105 (181)
T COG0241 29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILAS-QGV--KIDGILYCPHHPEDNCDCRK 105 (181)
T ss_pred HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHH-cCC--ccceEEECCCCCCCCCcccC
Confidence 3568999999999 89999999999654 446667777 676 477775 32 179
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
|+|.++..+++++.++..+.+||||+..|+++| .+ +|++.+.+..|......-. ...+ ++++++.++.
T Consensus 106 P~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a-~n---~gi~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ 173 (181)
T COG0241 106 PKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAA-EN---AGIKGVLVLTGIGVTTDGA-GRAK--WVFDSLAEFA 173 (181)
T ss_pred CChHHHHHHHHHhCCCccceEEecCcHHHHHHH-HH---CCCCceEEEcCcccccccc-cccc--cccccHHHHH
Confidence 999999999999999999999999999999999 99 9999888877654432211 1223 6677777765
No 78
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.21 E-value=6.2e-11 Score=105.49 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=86.5
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc-------eEE-----cC--CCCChHHHHHHH
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPD-------RIY-----GL--GTGPKVEVLKQL 148 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd-------~I~-----g~--d~kpkPe~l~~l 148 (218)
...+++||+.++|+ +.|++++|+|+....+++.++++ +|+...+. ..+ |. +.++||+.++++
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~-Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDK-LRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHH-cCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 44679999999999 89999999999999999999999 99975442 111 11 156999999999
Q ss_pred HhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc
Q 027821 149 QKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL 208 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~ 208 (218)
.++.++++.+|++|||+.+|+.++ ++ ||+.++ | ... +.+++ .++ +.++
T Consensus 257 a~~lgi~~~qtIaVGDg~NDl~m~-~~---AGlgiA---~-nAk-p~Vk~-~Ad--~~i~ 304 (322)
T PRK11133 257 AQEYEIPLAQTVAIGDGANDLPMI-KA---AGLGIA---Y-HAK-PKVNE-QAQ--VTIR 304 (322)
T ss_pred HHHcCCChhhEEEEECCHHHHHHH-HH---CCCeEE---e-CCC-HHHHh-hCC--EEec
Confidence 999999999999999999999999 99 998544 4 233 34433 345 5555
No 79
>PRK10444 UMP phosphatase; Provisional
Probab=99.21 E-value=4e-11 Score=102.98 Aligned_cols=73 Identities=15% Similarity=0.121 Sum_probs=66.0
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
.||+|+++..++...+.++.+|+||||+. +|+.+| ++ +|+++++|.||..+.++++.....|+++++++.||.
T Consensus 173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A-~~---~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAG-FQ---AGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHH-HH---cCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 57999999999998888999999999996 899999 99 999999999999999888765566779999999983
No 80
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.21 E-value=4.8e-11 Score=113.21 Aligned_cols=110 Identities=19% Similarity=0.227 Sum_probs=88.4
Q ss_pred CCCCCChHHHHH---hCC-CcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g-~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..++||+.++|+ ++| ++++|+||+++..++.++++ +|++.+|..+ ...+|++.++++.... .+++|||
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~-lgi~~~f~~~---~p~~K~~~v~~l~~~~----~~v~~vG 454 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE-LGIDEVHAEL---LPEDKLAIVKELQEEG----GVVAMVG 454 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH-hCCCeeeccC---CHHHHHHHHHHHHHcC----CEEEEEE
Confidence 689999999999 789 99999999999999999999 9998888754 2246788888887643 3779999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHHhh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFSRK 216 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~~~ 216 (218)
|+.+|+.++ ++ || ++|.||.++. .....+| +++. ++..+...
T Consensus 455 Dg~nD~~al-~~---A~---vgia~g~~~~--~~~~~Ad--~vi~~~~~~~l~~~ 498 (556)
T TIGR01525 455 DGINDAPAL-AA---AD---VGIAMGAGSD--VAIEAAD--IVLLNDDLSSLPTA 498 (556)
T ss_pred CChhHHHHH-hh---CC---EeEEeCCCCH--HHHHhCC--EEEeCCCHHHHHHH
Confidence 999999999 99 98 7899995443 3334456 7777 67766554
No 81
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.20 E-value=4.8e-12 Score=107.76 Aligned_cols=93 Identities=11% Similarity=0.006 Sum_probs=79.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceE--EcCC----CCChHHHHHHHHhcCCCC-CCcE
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRI--YGLG----TGPKVEVLKQLQKKPELQ-GMTL 159 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I--~g~d----~kpkPe~l~~l~~~~~~~-~~e~ 159 (218)
-|+|+.++|+ ++|+++ |+||++.......+.+ +|...+|..+ +|.+ .||+|++++.++.+.+.. ..++
T Consensus 139 ~~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~-~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~ 216 (242)
T TIGR01459 139 DLDEFDELFAPIVARKIPN-ICANPDRGINQHGIYR-YGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRM 216 (242)
T ss_pred CHHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceE-ecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccE
Confidence 3789999998 679997 9999999988888888 9998888866 5654 579999999999888643 5689
Q ss_pred EEEcCC-hhhHHHhhccCccCCceEEEEec
Q 027821 160 HFVEDR-LATLKNVIKEPELDGWNLYLGDW 188 (218)
Q Consensus 160 l~IGDs-~~Di~aA~k~~~~AGv~~i~V~~ 188 (218)
+||||+ .+|+.+| ++ +|+++++|.+
T Consensus 217 ~~vGD~~~~Di~~a-~~---~G~~~i~v~t 242 (242)
T TIGR01459 217 LMVGDSFYTDILGA-NR---LGIDTALVLT 242 (242)
T ss_pred EEECCCcHHHHHHH-HH---CCCeEEEEeC
Confidence 999999 6999999 99 9999999963
No 82
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.19 E-value=1.2e-10 Score=97.34 Aligned_cols=121 Identities=13% Similarity=0.122 Sum_probs=80.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC---ceEEcCC----CCChHHHH----------HH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP---DRIYGLG----TGPKVEVL----------KQ 147 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F---d~I~g~d----~kpkPe~l----------~~ 147 (218)
..++||+.++|+ ++|++++|+|++....++.++++ ++...+| +.+++.+ .+|+|+.. ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~-~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEG-IVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHh-hCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 579999999999 78999999999999999999999 7654444 2344333 34544332 12
Q ss_pred HHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhcC
Q 027821 148 LQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKLK 218 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~~ 218 (218)
+..+....+.+++||||+.+|+.+| ++ ||+ +.+ -++ .....+. ...|..-+++..|+..+|+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a-~~---Ad~--~~a-r~~-l~~~~~~-~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAA-KQ---SDL--CFA-RDY-LLNECEE-LGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHH-Hh---CCe--eEe-hHH-HHHHHHH-cCCCccCcCCHHHHHHHHH
Confidence 2222222456789999999999999 99 887 222 221 1111222 2235566899999887763
No 83
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.19 E-value=8.7e-11 Score=111.04 Aligned_cols=113 Identities=16% Similarity=0.212 Sum_probs=90.7
Q ss_pred cCCCCCChHHHHH---hCCC-cEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 87 ANRFYPGIPDALK---FASS-RIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~-~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
...++||+.++|+ ++|+ +++|+||+++..++.++++ +|++.+|..+. ..+|++.++++..+. .+++||
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~-lgi~~~f~~~~---p~~K~~~i~~l~~~~----~~v~~v 431 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARE-LGIDEVHAELL---PEDKLEIVKELREKY----GPVAMV 431 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHH-cCChhhhhccC---cHHHHHHHHHHHhcC----CEEEEE
Confidence 4679999999999 8999 9999999999999999999 99998876432 336778888887654 467999
Q ss_pred cCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhhc
Q 027821 163 EDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 217 (218)
Q Consensus 163 GDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~~ 217 (218)
||+.+|+.++ ++ || +++.||+...+. ....+| +++ +++.++.+.+
T Consensus 432 GDg~nD~~al-~~---A~---vgia~g~~~~~~-~~~~ad--~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 432 GDGINDAPAL-AA---AD---VGIAMGASGSDV-AIETAD--VVLLNDDLSRLPQAI 478 (536)
T ss_pred eCCHHHHHHH-Hh---CC---EEEEeCCCccHH-HHHhCC--EEEECCCHHHHHHHH
Confidence 9999999999 99 98 489999643233 333556 777 8999887643
No 84
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.18 E-value=3.5e-11 Score=102.35 Aligned_cols=98 Identities=16% Similarity=0.229 Sum_probs=86.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCCCCCCcE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
.....+|+.++|+ ++|..++|+||-+.+ .+.++.. +|+..|||.|+.+. .||+|.+++.+++..++++++|
T Consensus 111 ~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~-~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 111 AWKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLP-LGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred CceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhc-cCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 3467889999999 889999999999876 5588888 99999999987664 6899999999999999999999
Q ss_pred EEEcCChh-hHHHhhccCccCCceEEEEecCC
Q 027821 160 HFVEDRLA-TLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 160 l~IGDs~~-Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
++|||+.. |+++| ++ +||.++.|.-.-
T Consensus 189 vhIgD~l~nD~~gA-~~---~G~~ailv~~~~ 216 (237)
T KOG3085|consen 189 VHIGDLLENDYEGA-RN---LGWHAILVDNSI 216 (237)
T ss_pred EEecCccccccHhH-HH---cCCEEEEEcccc
Confidence 99999875 59999 99 999999997443
No 85
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.16 E-value=5.8e-11 Score=105.33 Aligned_cols=85 Identities=20% Similarity=0.178 Sum_probs=76.6
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHH---hcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRE---LAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~---~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
.+|||+.++|+ ++|++++||||++++.+..+|++ .+++.++|+.+.++ .+|||+.+..++++.++.+.+++||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-~~pk~~~i~~~~~~l~i~~~~~vfi 109 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-WGPKSESLRKIAKKLNLGTDSFLFI 109 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-cCchHHHHHHHHHHhCCCcCcEEEE
Confidence 57999999999 89999999999999999999985 13677889988666 4799999999999999999999999
Q ss_pred cCChhhHHHhhcc
Q 027821 163 EDRLATLKNVIKE 175 (218)
Q Consensus 163 GDs~~Di~aA~k~ 175 (218)
||++.|+.++ ++
T Consensus 110 dD~~~d~~~~-~~ 121 (320)
T TIGR01686 110 DDNPAERANV-KI 121 (320)
T ss_pred CCCHHHHHHH-HH
Confidence 9999999999 87
No 86
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.16 E-value=2.3e-10 Score=94.04 Aligned_cols=112 Identities=13% Similarity=0.148 Sum_probs=87.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce-EE
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR-IY 134 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~-I~ 134 (218)
|.+.+++....+++.+.+. ...++||+.++|+ ++|++++|+|++....++.++++ +|++.+|.. +.
T Consensus 66 g~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~-lg~~~~~~~~l~ 135 (202)
T TIGR01490 66 GLLEEDVRAIVEEFVNQKI---------ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARI-LGIDNAIGTRLE 135 (202)
T ss_pred CCCHHHHHHHHHHHHHHHH---------HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-cCCcceEecceE
Confidence 6777776655555443321 2368999999999 78999999999999999999999 999988755 22
Q ss_pred c-CC-------------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 135 G-LG-------------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 135 g-~d-------------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
. .+ .++|++.++.+..+.+++..++++||||.+|+.++ +. +|..++
T Consensus 136 ~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~-~~---a~~~~~ 195 (202)
T TIGR01490 136 ESEDGIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLL-SL---VGHPYV 195 (202)
T ss_pred EcCCCEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHH-Hh---CCCcEE
Confidence 1 11 13567778888887777778899999999999999 99 997664
No 87
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.08 E-value=2.2e-10 Score=93.97 Aligned_cols=85 Identities=21% Similarity=0.322 Sum_probs=74.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCC--CChHHHHHHHHhcCCCCCCcEEEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT--GPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~--kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
..++||+.++|+ ++|++++|+|+.+...+..+.+. +|| ++.++.++. ||.|+++.++.+.++.++.+++||
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~-lgi---~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQ-LGI---FDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHH-TTS---CSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccccc-ccc---ccccccccccccccchhHHHHHHHHhcCCCEEEEE
Confidence 578999999999 88999999999999999999999 999 454444444 899998888888887777899999
Q ss_pred cCChhhHHHhhccCccCC
Q 027821 163 EDRLATLKNVIKEPELDG 180 (218)
Q Consensus 163 GDs~~Di~aA~k~~~~AG 180 (218)
||+.+|+.|+ ++ ||
T Consensus 202 GDg~nD~~al-~~---Ag 215 (215)
T PF00702_consen 202 GDGVNDAPAL-KA---AG 215 (215)
T ss_dssp ESSGGHHHHH-HH---SS
T ss_pred ccCHHHHHHH-Hh---Cc
Confidence 9999999999 88 76
No 88
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.06 E-value=1.4e-08 Score=88.43 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=68.1
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc------CC----CCChH---------HH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG------LG----TGPKV---------EV 144 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g------~d----~kpkP---------e~ 144 (218)
...+.||+.++|+ ++|++++|+|+.....++.+|++ +|+...+..|++ .+ .+|.| .+
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~-lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v 197 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQ-AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDV 197 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHH-cCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHH
Confidence 4679999999999 89999999999999999999999 999878888843 32 22334 33
Q ss_pred HHHHHhcCC--CCCCcEEEEcCChhhHHHh
Q 027821 145 LKQLQKKPE--LQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 145 l~~l~~~~~--~~~~e~l~IGDs~~Di~aA 172 (218)
++......+ .++.+|++|||+.+|+.||
T Consensus 198 ~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma 227 (277)
T TIGR01544 198 ALRNTEYFNQLKDRSNIILLGDSQGDLRMA 227 (277)
T ss_pred HHHHHHHhCccCCcceEEEECcChhhhhHh
Confidence 444444444 4678899999999999999
No 89
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.03 E-value=2.3e-09 Score=89.50 Aligned_cols=114 Identities=12% Similarity=0.122 Sum_probs=80.5
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc--eEE-------cCC--CC-ChHHHHHHHHhcCC
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIY-------GLG--TG-PKVEVLKQLQKKPE 153 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd--~I~-------g~d--~k-pkPe~l~~l~~~~~ 153 (218)
.+++||+.++|+ +++.+++||||+....++.++++ +|++.+|. ..+ |.. .+ +|...++.+. +.+
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~-lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~-~~~ 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQ-LGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFK-SLY 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHH-cCCchhhceeeEEecCCeeECeeecCcchHHHHHHHHH-hhC
Confidence 578999999999 44469999999999999999999 99998886 222 211 23 3444555553 333
Q ss_pred CCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 154 LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 154 ~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.++++|||+.+|+.++ +. ||+.++.. ..+...+.++-- -++.+.+|+..-
T Consensus 145 ---~~~v~vGDs~nDl~ml-~~---Ag~~ia~~----ak~~~~~~~~~~--~~~~~~~~~~~~ 194 (203)
T TIGR02137 145 ---YRVIAAGDSYNDTTML-SE---AHAGILFH----APENVIREFPQF--PAVHTYEDLKRE 194 (203)
T ss_pred ---CCEEEEeCCHHHHHHH-Hh---CCCCEEec----CCHHHHHhCCCC--CcccCHHHHHHH
Confidence 3679999999999999 99 99876643 233333433323 346777777653
No 90
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=99.01 E-value=2e-09 Score=102.44 Aligned_cols=108 Identities=19% Similarity=0.236 Sum_probs=85.4
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.+++||+.++|+ ++|++++|+||+++..++.++++ +|++ +++.. ..+|++.++++..+ ..+++|||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~-lgi~-----~~~~~~p~~K~~~v~~l~~~----~~~v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE-LGIN-----VRAEVLPDDKAALIKELQEK----GRVVAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-cCCc-----EEccCChHHHHHHHHHHHHc----CCEEEEEe
Confidence 579999999999 78999999999999999999999 9996 33322 34778888887764 35679999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRK 216 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~ 216 (218)
|+.+|+.++ ++ ||+ ++.||+++. .....+| +++ +++.++...
T Consensus 474 Dg~nD~~al-~~---A~v---gia~g~g~~--~a~~~Ad--vvl~~~~l~~l~~~ 517 (562)
T TIGR01511 474 DGINDAPAL-AQ---ADV---GIAIGAGTD--VAIEAAD--VVLMRNDLNDVATA 517 (562)
T ss_pred CCCccHHHH-hh---CCE---EEEeCCcCH--HHHhhCC--EEEeCCCHHHHHHH
Confidence 999999999 99 885 788887653 3334456 777 477777654
No 91
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.01 E-value=1.3e-09 Score=97.63 Aligned_cols=96 Identities=20% Similarity=0.222 Sum_probs=79.0
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhc-C-------CCCCCceEEcCCCCC----------------
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELA-G-------VTIPPDRIYGLGTGP---------------- 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~-g-------l~~~Fd~I~g~d~kp---------------- 140 (218)
+.++||+.++|+ ++|++++|+||++.++++.+|++ + | +.+|||.|++...||
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~-l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKY-LLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-hhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCC
Confidence 567999999999 88999999999999999999999 6 7 899999999876444
Q ss_pred ---hHH---------H-----HHHHHhcCCCCCCcEEEEcCCh-hhHHHhhc-cCccCCceEEEEec
Q 027821 141 ---KVE---------V-----LKQLQKKPELQGMTLHFVEDRL-ATLKNVIK-EPELDGWNLYLGDW 188 (218)
Q Consensus 141 ---kPe---------~-----l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k-~~~~AGv~~i~V~~ 188 (218)
++. + +..+.+..+....+++||||+. .|+.+| + . +||++++|.-
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~-kk~---~Gw~TvlI~p 324 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRS-KKK---RGWRTAAIIP 324 (343)
T ss_pred CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhh-HHh---cCcEEEEEch
Confidence 111 1 1455555566788999999965 699999 6 8 9999999953
No 92
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.98 E-value=7.1e-09 Score=86.69 Aligned_cols=96 Identities=19% Similarity=0.202 Sum_probs=81.7
Q ss_pred CCCCCChHHHHH-hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--C--------CChHHHHHHHHhcCCCC-
Q 027821 88 NRFYPGIPDALK-FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--T--------GPKVEVLKQLQKKPELQ- 155 (218)
Q Consensus 88 ~~l~pGv~e~L~-~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--~--------kpkPe~l~~l~~~~~~~- 155 (218)
.+|=+-.+++|- -...+..+-||..+..+..+|++ +||.+.|+.|++.+ . ||.++.++.+....+++
T Consensus 99 LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~-LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKK-LGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred cCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHH-hChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 455566778877 22223899999999999999999 99999999998775 2 58889999999999887
Q ss_pred CCcEEEEcCChhhHHHhhccCccCCceEEEEec
Q 027821 156 GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDW 188 (218)
Q Consensus 156 ~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~ 188 (218)
+.+++|++||...|++| ++ -|++++.|.-
T Consensus 178 p~~t~FfDDS~~NI~~a-k~---vGl~tvlv~~ 206 (244)
T KOG3109|consen 178 PRNTYFFDDSERNIQTA-KE---VGLKTVLVGR 206 (244)
T ss_pred cCceEEEcCchhhHHHH-Hh---ccceeEEEEe
Confidence 89999999999999999 99 9999998853
No 93
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.96 E-value=2.8e-09 Score=85.43 Aligned_cols=87 Identities=17% Similarity=0.157 Sum_probs=71.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC--------------C--CCChHHHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL--------------G--TGPKVEVLKQ 147 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~--------------d--~kpkPe~l~~ 147 (218)
...++||+.++|+ ++|++++|+|++....++.++++ +|+..+|...+.. . ...|+..+++
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~-~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEK-LGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence 3568999999999 89999999999999999999999 9998777543221 1 2256778888
Q ss_pred HHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 148 LQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 148 l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
+....+++..+++||||+.+|+.++ +.
T Consensus 150 ~~~~~~~~~~~~~~iGDs~~D~~~~-~~ 176 (177)
T TIGR01488 150 LLEESKITLKKIIAVGDSVNDLPML-KL 176 (177)
T ss_pred HHHHhCCCHHHEEEEeCCHHHHHHH-hc
Confidence 8877777778899999999999999 65
No 94
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.91 E-value=3.5e-09 Score=104.92 Aligned_cols=113 Identities=20% Similarity=0.198 Sum_probs=91.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 164 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
..++||+.++|+ +.|++++++|++++..++.++++ +|+..+|..+ ...+|.+.++++..+ ..+++||||
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~-lgi~~~~~~~---~p~~K~~~i~~l~~~----~~~v~~vGD 720 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE-AGIDEVIAGV---LPDGKAEAIKRLQSQ----GRQVAMVGD 720 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCEEEeCC---CHHHHHHHHHHHhhc----CCEEEEEeC
Confidence 578999999999 88999999999999999999999 9997654422 123577777777654 456799999
Q ss_pred ChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 165 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 165 s~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
+.+|+.++ ++ ||+ +|.||.++...++.+ |+.+..+++.+|...+
T Consensus 721 g~nD~~al-~~---Agv---gia~g~g~~~a~~~a--d~vl~~~~~~~i~~~i 764 (834)
T PRK10671 721 GINDAPAL-AQ---ADV---GIAMGGGSDVAIETA--AITLMRHSLMGVADAL 764 (834)
T ss_pred CHHHHHHH-Hh---CCe---eEEecCCCHHHHHhC--CEEEecCCHHHHHHHH
Confidence 99999999 99 998 888998887777665 5448888999888765
No 95
>PRK08238 hypothetical protein; Validated
Probab=98.89 E-value=1.6e-08 Score=94.51 Aligned_cols=108 Identities=13% Similarity=0.105 Sum_probs=79.8
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCC--hHHHHHHHHhcCCCCCCc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGP--KVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kp--kPe~l~~l~~~~~~~~~e 158 (218)
.+++||+.++|+ ++|++++|+||+++..++.++++ +|+ ||.++|++ .+| |++.+. +..+ ..+
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~-lGl---Fd~Vigsd~~~~~kg~~K~~~l~---~~l~--~~~ 141 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAH-LGL---FDGVFASDGTTNLKGAAKAAALV---EAFG--ERG 141 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCC---CCEEEeCCCccccCCchHHHHHH---HHhC--ccC
Confidence 457799999999 89999999999999999999999 998 89999886 233 444443 3332 234
Q ss_pred EEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 159 LHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 159 ~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
+.|+|||.+|+.++ +. +| ..++|+-+..-... .+....|..++.+.
T Consensus 142 ~~yvGDS~~Dlp~~-~~---A~-~av~Vn~~~~l~~~-a~~~~~~~~~~~~~ 187 (479)
T PRK08238 142 FDYAGNSAADLPVW-AA---AR-RAIVVGASPGVARA-ARALGPVERVFPPR 187 (479)
T ss_pred eeEecCCHHHHHHH-Hh---CC-CeEEECCCHHHHHH-HHHcCCcceecCCC
Confidence 68999999999999 98 88 88888655432222 22344555555443
No 96
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=98.84 E-value=1.3e-08 Score=81.85 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=74.1
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCCh-
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRL- 166 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~- 166 (218)
=|.+.+-+. .+|+++.|+||+.+..+....++ +|+. +|+.+ .||-+..+++++.+.++++++|+||||..
T Consensus 48 tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~-l~v~----fi~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~ 121 (175)
T COG2179 48 TPELRAWLAELKEAGIKVVVVSNNKESRVARAAEK-LGVP----FIYRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQLF 121 (175)
T ss_pred CHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhh-cCCc----eeecc-cCccHHHHHHHHHHcCCChhHEEEEcchhh
Confidence 344555555 89999999999999999999999 8864 34433 47999999999999999999999999996
Q ss_pred hhHHHhhccCccCCceEEEEe
Q 027821 167 ATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 167 ~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+|+.+| +. +|+.||.|-
T Consensus 122 TDVlgg-nr---~G~~tIlV~ 138 (175)
T COG2179 122 TDVLGG-NR---AGMRTILVE 138 (175)
T ss_pred hhhhcc-cc---cCcEEEEEE
Confidence 799999 88 999999994
No 97
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.76 E-value=1e-08 Score=82.56 Aligned_cols=94 Identities=9% Similarity=-0.094 Sum_probs=74.9
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCC-CCceEEcCCC--CChHHHHHHHHhcCCCCCCcEEEE
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTI-PPDRIYGLGT--GPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~-~Fd~I~g~d~--kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
+..-||+.++|+ .+.+.++|.|++.+.+++.++++ ++... +|+.+++.+. ..++. +.+.+...+.+..+++||
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~-ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDI-LDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHH-HCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEE
Confidence 457799999999 55699999999999999999999 99875 8999888761 12222 433334445567889999
Q ss_pred cCChhhHHHhhccCccCCceEEEEe
Q 027821 163 EDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 163 GDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
||++.++.++ ++ +|+.+..-.
T Consensus 119 DD~~~~~~~~-~~---NgI~i~~f~ 139 (162)
T TIGR02251 119 DNSPYSYSLQ-PD---NAIPIKSWF 139 (162)
T ss_pred eCChhhhccC-cc---CEeecCCCC
Confidence 9999999999 88 999877654
No 98
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.75 E-value=2e-08 Score=85.47 Aligned_cols=87 Identities=17% Similarity=0.323 Sum_probs=70.3
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH--HHHHHhcCCCC-CCceEEcCCCCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFAD--ALLRELAGVTI-PPDRIYGLGTGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~--~iL~~~~gl~~-~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
....+|||+.++|+ ++|++++|+||++++... ..|++ +|+.. +|+.|++++.-. .+.+..+..+.+..+.++
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~-~gl~~~~~~~Ii~s~~~~-~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS-LGINADLPEMIISSGEIA-VQMILESKKRFDIRNGII 98 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH-CCCCccccceEEccHHHH-HHHHHhhhhhccCCCceE
Confidence 34679999999999 789999999999988766 78999 99998 999999987211 246666666665566788
Q ss_pred EEEcCChhhHHHhhcc
Q 027821 160 HFVEDRLATLKNVIKE 175 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~ 175 (218)
++|||+..|++.. ..
T Consensus 99 ~~vGd~~~d~~~~-~~ 113 (242)
T TIGR01459 99 YLLGHLENDIINL-MQ 113 (242)
T ss_pred EEeCCcccchhhh-cC
Confidence 9999999999876 55
No 99
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.70 E-value=7.6e-08 Score=78.27 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=73.0
Q ss_pred ccccCCCCCChHHHHH---hCCCcEEEEc-CCChHHHHHHHHHhcCCC----------CCCceEEcCCCCChHHHHHHHH
Q 027821 84 WIGANRFYPGIPDALK---FASSRIYIVT-TKQSRFADALLRELAGVT----------IPPDRIYGLGTGPKVEVLKQLQ 149 (218)
Q Consensus 84 ~~~~~~l~pGv~e~L~---~~g~~laIvT-nk~~~~~~~iL~~~~gl~----------~~Fd~I~g~d~kpkPe~l~~l~ 149 (218)
..+...+||+|+++|+ .+|+++|||| +...+.++.+|+. +++. ++|+..--. .+.|-..+.++.
T Consensus 40 ~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~-l~i~~~~~~~~~~~~~F~~~eI~-~gsK~~Hf~~i~ 117 (169)
T PF12689_consen 40 RGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKL-LEIDDADGDGVPLIEYFDYLEIY-PGSKTTHFRRIH 117 (169)
T ss_dssp T--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHH-TT-C----------CCECEEEES-SS-HHHHHHHHH
T ss_pred CCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHh-cCCCccccccccchhhcchhhee-cCchHHHHHHHH
Confidence 3556789999999999 8999999999 5667899999999 9999 888875221 247888899999
Q ss_pred hcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 150 KKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
++.+++..+++|++|....++.. +. -||.|+.|.-|..-
T Consensus 118 ~~tgI~y~eMlFFDDe~~N~~~v-~~---lGV~~v~v~~Glt~ 156 (169)
T PF12689_consen 118 RKTGIPYEEMLFFDDESRNIEVV-SK---LGVTCVLVPDGLTW 156 (169)
T ss_dssp HHH---GGGEEEEES-HHHHHHH-HT---TT-EEEE-SSS--H
T ss_pred HhcCCChhHEEEecCchhcceee-Ee---cCcEEEEeCCCCCH
Confidence 99999999999999999999999 88 99999999887643
No 100
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=98.68 E-value=1.7e-07 Score=81.52 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=68.1
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.||.|.+++.+++..+.+..+++||||+. +||.+| ++ +||.++.|.+|.++.+++......|+++++++.|+..+
T Consensus 189 GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a-~~---~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~ 264 (269)
T COG0647 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGA-KA---AGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITA 264 (269)
T ss_pred CCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHH-HH---cCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhh
Confidence 57999999999999988888999999995 799999 99 99999999999998888776667788999999998876
Q ss_pred c
Q 027821 217 L 217 (218)
Q Consensus 217 ~ 217 (218)
+
T Consensus 265 ~ 265 (269)
T COG0647 265 L 265 (269)
T ss_pred h
Confidence 5
No 101
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.60 E-value=1.9e-07 Score=93.31 Aligned_cols=115 Identities=17% Similarity=0.222 Sum_probs=85.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC-----------------------C-CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGL-----------------------G-TGP 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~-----------------------d-~kp 140 (218)
.+++||+.++++ ++|+++.++|+.+...+..+.++ +|+..+++.++++ . ...
T Consensus 527 Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~-~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~ 605 (884)
T TIGR01522 527 DPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARR-LGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEH 605 (884)
T ss_pred CcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHH
Confidence 478999999999 89999999999999999999999 9998777654332 1 112
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHHhhc
Q 027821 141 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFSRKL 217 (218)
Q Consensus 141 kPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~~~~ 217 (218)
|-.+++.+... ...+.||||+.+|+.|. ++ |+ ||+.||.+. .+.....+| +++ +++..+...+
T Consensus 606 K~~iv~~lq~~----g~~v~mvGDGvND~pAl-~~---Ad---VGia~g~~g-~~va~~aaD--ivl~dd~~~~i~~~i 670 (884)
T TIGR01522 606 KMKIVKALQKR----GDVVAMTGDGVNDAPAL-KL---AD---IGVAMGQTG-TDVAKEAAD--MILTDDDFATILSAI 670 (884)
T ss_pred HHHHHHHHHHC----CCEEEEECCCcccHHHH-Hh---CC---eeEecCCCc-CHHHHHhcC--EEEcCCCHHHHHHHH
Confidence 33344444433 34568999999999999 99 88 588888643 334444557 888 5688877643
No 102
>PRK11590 hypothetical protein; Provisional
Probab=98.60 E-value=1.1e-06 Score=73.39 Aligned_cols=113 Identities=10% Similarity=0.003 Sum_probs=77.8
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHH-H---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDAL-K---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY 134 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L-~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~ 134 (218)
|.+.+++++..+.|++.|.+. ..+|||+.++| + ++|++++||||+++..++.++++ +|+.. .+.++
T Consensus 73 g~~~~~~~~~~~~f~~~~~~~--------~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~-l~~~~-~~~~i 142 (211)
T PRK11590 73 GHSEARLQALEADFVRWFRDN--------VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFD-TPWLP-RVNLI 142 (211)
T ss_pred CCCHHHHHHHHHHHHHHHHHh--------CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHH-ccccc-cCceE
Confidence 566667777778887777332 46799999999 4 57999999999999999999999 99743 33444
Q ss_pred cCC-----C----CC--h-HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 135 GLG-----T----GP--K-VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 135 g~d-----~----kp--k-Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
|.+ + ++ . .+-..++.+-++.+...+.+-|||.+|+..- .. +|- .++|
T Consensus 143 ~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL-~~---a~~-~~~v 201 (211)
T PRK11590 143 ASQMQRRYGGWVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLL-YF---CQH-RWRV 201 (211)
T ss_pred EEEEEEEEccEECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHH-Hh---CCC-CEEE
Confidence 443 1 11 1 2223333333222445668999999999999 77 774 3445
No 103
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.54 E-value=2.9e-07 Score=90.34 Aligned_cols=110 Identities=18% Similarity=0.187 Sum_probs=85.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 164 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
.+++||+.++++ ++|++++++|+.+...++.+.++ +|+..+++ .....|++.++++... ..+.||||
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~-lgi~~~~~----~~p~~K~~~v~~l~~~-----~~v~mvGD 636 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE-LGIDFRAG----LLPEDKVKAVTELNQH-----APLAMVGD 636 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCeecC----CCHHHHHHHHHHHhcC-----CCEEEEEC
Confidence 489999999999 78999999999999999999999 99974332 1122578888877642 35789999
Q ss_pred ChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 165 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 165 s~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
+.+|+.+. +. |+ +++.+|.++....+.+ |....-+++..|...
T Consensus 637 giNDapAl-~~---A~---vgia~g~~~~~a~~~a--divl~~~~l~~l~~~ 679 (741)
T PRK11033 637 GINDAPAM-KA---AS---IGIAMGSGTDVALETA--DAALTHNRLRGLAQM 679 (741)
T ss_pred CHHhHHHH-Hh---CC---eeEEecCCCHHHHHhC--CEEEecCCHHHHHHH
Confidence 99999999 88 88 7888898776555544 533555777777643
No 104
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.54 E-value=3.2e-07 Score=78.58 Aligned_cols=110 Identities=11% Similarity=0.072 Sum_probs=75.4
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCC-----hHHHHHHHHHhcCCCC---CCceE-EcCCCCChHHHHHHHHhcCCCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQ-----SRFADALLRELAGVTI---PPDRI-YGLGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~-----~~~~~~iL~~~~gl~~---~Fd~I-~g~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
.++++.++++ ..+..+.|+|+.+ .+..+.++++ +++.. +++.+ +......|+..++.+++.++++..
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~ 216 (272)
T PRK10530 138 TFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE-LGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMK 216 (272)
T ss_pred ceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh-cCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHH
Confidence 4667777766 4566677888754 3445566666 66542 11212 111123689999999999999999
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
++++|||+.+|+.++ +. ||+ +|.+|... ++++. .++ +++.+..
T Consensus 217 e~i~~GD~~NDi~m~-~~---ag~---~vamgna~-~~lk~-~Ad--~v~~~n~ 259 (272)
T PRK10530 217 NVVAFGDNFNDISML-EA---AGL---GVAMGNAD-DAVKA-RAD--LVIGDNT 259 (272)
T ss_pred HeEEeCCChhhHHHH-Hh---cCc---eEEecCch-HHHHH-hCC--EEEecCC
Confidence 999999999999999 99 895 66778654 45543 456 8876633
No 105
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.53 E-value=2e-07 Score=74.96 Aligned_cols=88 Identities=23% Similarity=0.283 Sum_probs=63.5
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCC---h-----------HHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHH
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQ---S-----------RFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQL 148 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~---~-----------~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l 148 (218)
..|+|.+.|+ +.|++++|+||.. + +.++.+++. +|+. +..+++.. +||+|.|+..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~-l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKE-LGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHH-CTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHH-cCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 4568999999 8999999999972 2 456777887 7765 34334432 89999999999
Q ss_pred HhcCCC----CCCcEEEEcCC-----------hhhHHHhhccCccCCceEE
Q 027821 149 QKKPEL----QGMTLHFVEDR-----------LATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 149 ~~~~~~----~~~e~l~IGDs-----------~~Di~aA~k~~~~AGv~~i 184 (218)
...... +..+++||||+ ..|.+-| .| .|+++.
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA-~N---~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFA-LN---CGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHH-HH---HT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHH-HH---cCCccc
Confidence 888753 77889999996 7889999 99 888754
No 106
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.50 E-value=1.7e-07 Score=83.32 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=56.6
Q ss_pred CCChHHHHHHHHhcC--------C-----CCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCC
Q 027821 138 TGPKVEVLKQLQKKP--------E-----LQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIP 203 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~--------~-----~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p 203 (218)
.||+|.+++.++... + .++++++||||++ +||..| ++ +||.++.|.+|-.+.++. .....|
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga-~~---~G~~silV~tG~~~~~~~-~~~~~p 306 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGA-QN---YGWFSCLVKTGVYNGGDD-LKECKP 306 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhH-Hh---CCceEEEecccccCCCCC-CCCCCC
Confidence 578888886544333 2 1346899999998 999999 99 999999999994443332 123346
Q ss_pred CeEEcChhHHHhhc
Q 027821 204 RIQLLQLSDFSRKL 217 (218)
Q Consensus 204 ~~~~~~~~~l~~~~ 217 (218)
+++++++.|+.+++
T Consensus 307 ~~vv~~l~e~~~~i 320 (321)
T TIGR01456 307 TLIVNDVFDAVTKI 320 (321)
T ss_pred CEEECCHHHHHHHh
Confidence 79999999999876
No 107
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.46 E-value=1.5e-06 Score=73.01 Aligned_cols=92 Identities=13% Similarity=0.180 Sum_probs=78.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--------------CCChHHHHHHHHh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--------------TGPKVEVLKQLQK 150 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--------------~kpkPe~l~~l~~ 150 (218)
.+++||+.++++ ++|.+++|+|+.....++.+.++ +|++..+...+..+ .+.|-+.+.++..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~-lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAER-LGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHH-hCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 579999999999 89999999999999999999999 99987776543221 2356778889999
Q ss_pred cCCCCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 151 KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 151 ~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+.+++..+++++|||.+|+-+= +. +|.+.+
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml-~~---ag~~ia 184 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPML-EA---AGLPIA 184 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHH-Hh---CCCCeE
Confidence 9888888999999999999999 88 887544
No 108
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.45 E-value=1.3e-06 Score=75.92 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=66.3
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCC-CceEEcCC-CCChHHHHHHHHhcCCCCCCc
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---RFADALLRELAGVTIP-PDRIYGLG-TGPKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~-Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e 158 (218)
...++||+.++|+ ++|++++|+||+.. +.+...|++ +|+..+ ++.++..+ .++|+.-...+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk-~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKR-FGFPQADEEHLLLKKDKSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHH-cCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCE----
Confidence 4679999999999 89999999999874 456688899 999764 57777665 56888888888777664
Q ss_pred EEEEcCChhhHHHh
Q 027821 159 LHFVEDRLATLKNV 172 (218)
Q Consensus 159 ~l~IGDs~~Di~aA 172 (218)
+++|||+..|+...
T Consensus 191 vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 VLLFGDNLLDFDDF 204 (266)
T ss_pred EEEECCCHHHhhhh
Confidence 58999999999776
No 109
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.42 E-value=4e-06 Score=70.27 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=76.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHH----hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE
Q 027821 59 SENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALK----FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY 134 (218)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~----~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~ 134 (218)
|.+.+++++..+.|.+.|.+ ...+|||+.++|+ ++|.+++||||+++..++.+.+. .++..-.+.|
T Consensus 72 g~~~~~l~~~~~~f~~~~~~--------~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~-~~~~~~~~~i- 141 (210)
T TIGR01545 72 GHREAHLQDLEADFVAAFRD--------KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFD-SNFIHRLNLI- 141 (210)
T ss_pred CCCHHHHHHHHHHHHHHHHH--------hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHh-ccccccCcEE-
Confidence 77777888888888877733 2468999999994 47999999999999999999988 7774434433
Q ss_pred cCC-----C----CC--h-HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 135 GLG-----T----GP--K-VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 135 g~d-----~----kp--k-Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
|.+ . ++ . ++-..++.+-++.+...+.+-|||.+|+..- .. +|-+
T Consensus 142 ~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL-~~---a~~~ 197 (210)
T TIGR01545 142 ASQIERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLL-AF---CEHR 197 (210)
T ss_pred EEEeEEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHH-Hh---CCCc
Confidence 432 1 11 1 2222333322222444568999999999998 76 7743
No 110
>PTZ00445 p36-lilke protein; Provisional
Probab=98.37 E-value=8e-07 Score=74.42 Aligned_cols=93 Identities=18% Similarity=0.240 Sum_probs=75.6
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCCh---------------HHHHHHHHHhcCCCCCCceEEcCC--------------
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQS---------------RFADALLRELAGVTIPPDRIYGLG-------------- 137 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~---------------~~~~~iL~~~~gl~~~Fd~I~g~d-------------- 137 (218)
+-|...+++. +.|++++|||-+++ +.++..|++ -+.+.-++.+++.-
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~-s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKK-SKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHh-cCccceeeeeeeeCCcccCChhhhhhhc
Confidence 3455555555 79999999997776 368899997 77776666666421
Q ss_pred -CCChHHH--H--HHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 138 -TGPKVEV--L--KQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 138 -~kpkPe~--l--~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.||.|++ + ++++++.++.++|++||+|+..++++| ++ .|+.++.+.
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA-~~---lGi~ai~f~ 205 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA-LK---EGYIALHVT 205 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH-HH---CCCEEEEcC
Confidence 3588888 7 999999999999999999999999999 98 999999885
No 111
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.37 E-value=4.7e-07 Score=76.97 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=60.1
Q ss_pred hCCCcEEEEcCCChHHHH-HHHHHhcCCCCCCceEE---cCC----CCChHHHHHHHHhcCCCCCCcE-EEEcCCh-hhH
Q 027821 100 FASSRIYIVTTKQSRFAD-ALLRELAGVTIPPDRIY---GLG----TGPKVEVLKQLQKKPELQGMTL-HFVEDRL-ATL 169 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~-~iL~~~~gl~~~Fd~I~---g~d----~kpkPe~l~~l~~~~~~~~~e~-l~IGDs~-~Di 169 (218)
++|-...|+||.+.-... .-... .|...+|+.+. +.. .||+|++++.+.++.+.++.++ +||||+. +|+
T Consensus 142 ~~~~~~~i~tN~d~~~~~~~g~~~-~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di 220 (236)
T TIGR01460 142 AEGDVPFIAANRDDLVRLGDGRFR-PGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDI 220 (236)
T ss_pred hCCCCeEEEECCCCCCCCCCCcEe-ecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHH
Confidence 445357788886631111 11222 45555544432 222 4799999999999888777777 9999998 899
Q ss_pred HHhhccCccCCceEEEEecC
Q 027821 170 KNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 170 ~aA~k~~~~AGv~~i~V~~G 189 (218)
.+| ++ +|+++++|.||
T Consensus 221 ~~A-~~---~G~~~i~v~~G 236 (236)
T TIGR01460 221 LGA-KN---AGFDTLLVLTG 236 (236)
T ss_pred HHH-HH---CCCcEEEEecC
Confidence 999 99 99999999997
No 112
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.23 E-value=3.2e-06 Score=67.86 Aligned_cols=83 Identities=17% Similarity=0.131 Sum_probs=62.7
Q ss_pred ccCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCC-CCC-ceEEcCC--CCChHHHHHHHHhcCCCCCCcE
Q 027821 86 GANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPP-DRIYGLG--TGPKVEVLKQLQKKPELQGMTL 159 (218)
Q Consensus 86 ~~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~-~~F-d~I~g~d--~kpkPe~l~~l~~~~~~~~~e~ 159 (218)
..+.++||+.++|+ .++++++|+||+.++++..++++ ++.. .+| +.|+|.+ .++...-+..+. +.+...+
T Consensus 55 ~~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~-ldp~~~~F~~ri~~rd~~~~~~~KdL~~i~---~~d~~~v 130 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKL-IDPDGKYFGDRIISRDESGSPHTKSLLRLF---PADESMV 130 (156)
T ss_pred EEEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHH-hCcCCCeeccEEEEeccCCCCccccHHHHc---CCCcccE
Confidence 44679999999999 77799999999999999999999 9998 589 7788776 233222233332 2245578
Q ss_pred EEEcCChhhHHHh
Q 027821 160 HFVEDRLATLKNV 172 (218)
Q Consensus 160 l~IGDs~~Di~aA 172 (218)
++|+|++.=...-
T Consensus 131 vivDd~~~~~~~~ 143 (156)
T TIGR02250 131 VIIDDREDVWPWH 143 (156)
T ss_pred EEEeCCHHHhhcC
Confidence 9999998555544
No 113
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.15 E-value=4.7e-06 Score=72.89 Aligned_cols=75 Identities=23% Similarity=0.188 Sum_probs=66.1
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCCCCHHHHHhc----cCCCCeEEcChhH
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA----ASIPRIQLLQLSD 212 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a----~~~p~~~~~~~~~ 212 (218)
.||.+.++..+.++.++++++|+||||+. +||.-| ++ .|++++.|..|-++.++.+.+ ...|+|.++++.|
T Consensus 223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG-~~---~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d 298 (306)
T KOG2882|consen 223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFG-KN---CGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGD 298 (306)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHh-hc---cCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHH
Confidence 47889999999999999999999999996 699999 99 999999999999988887665 3457799999988
Q ss_pred HHhh
Q 027821 213 FSRK 216 (218)
Q Consensus 213 l~~~ 216 (218)
+..-
T Consensus 299 ~~~~ 302 (306)
T KOG2882|consen 299 LLPL 302 (306)
T ss_pred Hhhh
Confidence 8753
No 114
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.13 E-value=1.4e-05 Score=80.32 Aligned_cols=113 Identities=20% Similarity=0.262 Sum_probs=81.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC--------Cc-------------------eEEcCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP--------PD-------------------RIYGLG 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~--------Fd-------------------~I~g~d 137 (218)
.++.||+.++++ ++|+++.++|+.+.+.+..+.++ +|+... ++ .|++..
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~-~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~ 614 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRR-IGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRV 614 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH-cCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEec
Confidence 478999999999 99999999999999999999999 999641 11 122222
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC--hhHHH
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ--LSDFS 214 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~--~~~l~ 214 (218)
...|-.+++.+.. . ...+.|+||+.+|+.|. +. |++ ||.+|.++.. ....+| +++.+ +..+.
T Consensus 615 ~P~~K~~iV~~lq~-~---g~~va~iGDG~ND~~al-k~---AdV---Gia~g~g~~~--ak~aAD--~vl~dd~f~~i~ 679 (917)
T TIGR01116 615 EPSHKSELVELLQE-Q---GEIVAMTGDGVNDAPAL-KK---ADI---GIAMGSGTEV--AKEASD--MVLADDNFATIV 679 (917)
T ss_pred CHHHHHHHHHHHHh-c---CCeEEEecCCcchHHHH-Hh---CCe---eEECCCCcHH--HHHhcC--eEEccCCHHHHH
Confidence 1234445565543 2 34568999999999999 99 998 6777755432 333456 88876 77766
Q ss_pred hh
Q 027821 215 RK 216 (218)
Q Consensus 215 ~~ 216 (218)
+.
T Consensus 680 ~~ 681 (917)
T TIGR01116 680 AA 681 (917)
T ss_pred HH
Confidence 54
No 115
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.01 E-value=3.1e-05 Score=63.48 Aligned_cols=96 Identities=17% Similarity=0.226 Sum_probs=74.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHH--hcCCCCCCceEEcCCCCCh--HHHHHHHHhcCCCCCCcEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRE--LAGVTIPPDRIYGLGTGPK--VEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~--~~gl~~~Fd~I~g~d~kpk--Pe~l~~l~~~~~~~~~e~l 160 (218)
..+||.+.+.|+ +.|++++|-||.+-..-+-+..+ +-+|..+|+..+-...++| ...+.++....++++.|++
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~eil 181 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEIL 181 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchheE
Confidence 579999999999 89999999999886544434332 1244555555544443344 4578889888888999999
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEe
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
|+-|.+..+.|| +. +|+.++++.
T Consensus 182 FLSDn~~EL~AA-~~---vGl~t~l~~ 204 (229)
T COG4229 182 FLSDNPEELKAA-AG---VGLATGLAV 204 (229)
T ss_pred EecCCHHHHHHH-Hh---cchheeeee
Confidence 999999999999 88 999999884
No 116
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.00 E-value=0.00023 Score=60.86 Aligned_cols=109 Identities=16% Similarity=0.192 Sum_probs=84.1
Q ss_pred ccCCCCCChHHHHH-----hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-----C--------------C--
Q 027821 86 GANRFYPGIPDALK-----FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----T--------------G-- 139 (218)
Q Consensus 86 ~~~~l~pGv~e~L~-----~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-----~--------------k-- 139 (218)
...++-||+.++++ +.|+.++|+|....-+++.+|++ +|+...|+.|++.. . .
T Consensus 68 ~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~-~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~ 146 (234)
T PF06888_consen 68 RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEH-HGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCP 146 (234)
T ss_pred HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHh-CCCccccceEEeCCceecCCceEEEeCccCCCCCcCC
Confidence 44678999999999 36999999999999999999999 99999999999763 0 1
Q ss_pred ---ChHHHHHHHHhcC---CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 140 ---PKVEVLKQLQKKP---ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 140 ---pkPe~l~~l~~~~---~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
.|-.+++++.... +..-.+++||||+.+|+=.+ .+ +..-.++...-||.-...+..
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~-~~--L~~~D~v~~R~~~~l~~~i~~ 208 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA-LR--LRPRDVVFPRKGYPLHKLIQK 208 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc-cc--cCCCCEEecCCCChHHHHHhc
Confidence 3455666666552 33457889999999999888 53 133467888888866655544
No 117
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.00 E-value=1.2e-05 Score=64.89 Aligned_cols=77 Identities=18% Similarity=0.317 Sum_probs=58.7
Q ss_pred CChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-------------CC--C--hHHHHHHH---
Q 027821 92 PGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-------------TG--P--KVEVLKQL--- 148 (218)
Q Consensus 92 pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-------------~k--p--kPe~l~~l--- 148 (218)
|++.++|+ ++|++++|+|++....++.++++ +|+...+ +++.+ .+ . |...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~-~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAER-LGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHH-TTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHH-cCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 44449998 88999999999999999999999 9987522 22111 11 2 88888888
Q ss_pred HhcCCCCCCcEEEEcCChhhHHHh
Q 027821 149 QKKPELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 149 ~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
... ......+++||||.+|+.++
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~l 191 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPML 191 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHh
Confidence 333 34667889999999999987
No 118
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.98 E-value=1.1e-05 Score=70.78 Aligned_cols=53 Identities=15% Similarity=0.073 Sum_probs=46.9
Q ss_pred CChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHH
Q 027821 92 PGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVL 145 (218)
Q Consensus 92 pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l 145 (218)
||+.|+|+ ++|++++|+||+.++.+...|++ +||..||+.|+|++ .+|.|+..
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~-lGLd~YFdvIIs~Gdv~~~kp~~e~~ 208 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK-VKLDRYFDIIISGGHKAEEYSTMSTE 208 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH-cCCCcccCEEEECCccccCCCCcccc
Confidence 89999999 88999999999999999999999 99999999998876 23556544
No 119
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.97 E-value=3e-05 Score=60.30 Aligned_cols=117 Identities=12% Similarity=0.198 Sum_probs=85.0
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceE-EcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRI-YGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I-~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
...-++|+.|.+.++ +. ++++|+|+....++....+- .|+. .+.+ .++++--|-++++.+.... .-++
T Consensus 26 atgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~-~gi~--~~rv~a~a~~e~K~~ii~eLkk~~----~k~v 97 (152)
T COG4087 26 ATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEF-VGIP--VERVFAGADPEMKAKIIRELKKRY----EKVV 97 (152)
T ss_pred ccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHH-cCCc--eeeeecccCHHHHHHHHHHhcCCC----cEEE
Confidence 344689999999999 66 99999999999999999998 8975 3444 3444446666777776533 3458
Q ss_pred EEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
||||..+|+.+- ++ |.+-.+-+.-+-..+..+. .+| +++.++.|++.-+
T Consensus 98 mVGnGaND~laL-r~---ADlGI~tiq~e~v~~r~l~--~AD--vvik~i~e~ldl~ 146 (152)
T COG4087 98 MVGNGANDILAL-RE---ADLGICTIQQEGVPERLLL--TAD--VVLKEIAEILDLL 146 (152)
T ss_pred EecCCcchHHHh-hh---cccceEEeccCCcchHHHh--hch--hhhhhHHHHHHHh
Confidence 999999999999 88 7766555543333333233 447 8899999887654
No 120
>PLN02645 phosphoglycolate phosphatase
Probab=97.90 E-value=6.6e-05 Score=66.42 Aligned_cols=88 Identities=13% Similarity=0.261 Sum_probs=64.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHH---HHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFA---DALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~---~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~ 161 (218)
..++||+.++|+ ++|++++++||++.... ..-|++ +|+...++.|+++.. .....+...+....+.+|
T Consensus 43 ~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~-lGi~~~~~~I~ts~~-----~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 43 DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES-LGLNVTEEEIFSSSF-----AAAAYLKSINFPKDKKVY 116 (311)
T ss_pred CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH-CCCCCChhhEeehHH-----HHHHHHHhhccCCCCEEE
Confidence 468999999998 78999999999884433 344577 899888888877642 333333332222223489
Q ss_pred EcCChhhHHHhhccCccCCceEEE
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~ 185 (218)
|+++..+.+.+ ++ +|+.+++
T Consensus 117 viG~~~~~~~l-~~---~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEEL-EL---AGFQYLG 136 (311)
T ss_pred EEcCHHHHHHH-HH---CCCEEec
Confidence 99999999999 88 9998765
No 121
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.73 E-value=0.00015 Score=60.14 Aligned_cols=84 Identities=19% Similarity=0.367 Sum_probs=67.8
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC--CC-ceE--------EcCC-------CCChHHHH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI--PP-DRI--------YGLG-------TGPKVEVL 145 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~--~F-d~I--------~g~d-------~kpkPe~l 145 (218)
..++-|||+|+.. ++|.+++++|+.-+..+..+-.+ +||.. .| ..+ .|.+ ++.|++.+
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~-Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i 164 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQ-LGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVI 164 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHH-hCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHH
Confidence 5678999999999 99999999999999999999999 99974 11 111 1212 45889999
Q ss_pred HHHHhcCCCCCCcEEEEcCChhhHHHhhc
Q 027821 146 KQLQKKPELQGMTLHFVEDRLATLKNVIK 174 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA~k 174 (218)
+.+.+.. +-..+.||||..+|++|. .
T Consensus 165 ~~lrk~~--~~~~~~mvGDGatDlea~-~ 190 (227)
T KOG1615|consen 165 ALLRKNY--NYKTIVMVGDGATDLEAM-P 190 (227)
T ss_pred HHHHhCC--ChheeEEecCCccccccC-C
Confidence 8888844 556779999999999988 5
No 122
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.70 E-value=0.00016 Score=60.23 Aligned_cols=78 Identities=14% Similarity=0.094 Sum_probs=59.4
Q ss_pred CCCcEEE-EcCCChHHHHHHHHHhcCCC----CCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 101 ASSRIYI-VTTKQSRFADALLRELAGVT----IPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 101 ~g~~laI-vTnk~~~~~~~iL~~~~gl~----~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
.++.+.+ .|++..+.+...+++ .++. .+|..|.+.+. .|+..++.+++.++++++++++|||+.+|+.+- +.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~-~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml-~~ 213 (221)
T TIGR02463 137 ASVPLLWRDSDSRMPRFTALLAD-LGLAIVQGNRFSHVLGASS-SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLL-EV 213 (221)
T ss_pred CCccEEecCchhHHHHHHHHHHH-cCCeEEecCCeeEEecCCC-CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHH-Hh
Confidence 3455555 567777778888888 7876 45544554442 577788999999999999999999999999999 98
Q ss_pred CccCCceEE
Q 027821 176 PELDGWNLY 184 (218)
Q Consensus 176 ~~~AGv~~i 184 (218)
+|..++
T Consensus 214 ---ag~~va 219 (221)
T TIGR02463 214 ---ADYAVV 219 (221)
T ss_pred ---CCceEE
Confidence 886543
No 123
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.67 E-value=7.3e-05 Score=65.78 Aligned_cols=46 Identities=17% Similarity=0.041 Sum_probs=43.3
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
-||+.++|+ ++|++++|+||++++.+...|++ +|+..+|+.|+|++
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~-lgL~~yFDvII~~g 198 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE-TKLEGYFDIIICGG 198 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH-cCCCccccEEEECC
Confidence 389999999 88999999999999999999999 99999999998876
No 124
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.65 E-value=0.00017 Score=56.27 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=72.2
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHH----HHHHhcC--CCCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVL----KQLQKKP--ELQG 156 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l----~~l~~~~--~~~~ 156 (218)
..+.+||.|.++|+ +.|+-++.+|-+....+-..|+. +++..||+.++-....-|-.|+ +.+..+- .+.+
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra-l~~~~yFhy~ViePhP~K~~ML~~llr~i~~er~~~ikP 116 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA-LDLLQYFHYIVIEPHPYKFLMLSQLLREINTERNQKIKP 116 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH-hchhhhEEEEEecCCChhHHHHHHHHHHHHHhhccccCc
Confidence 34689999999999 88999999999999999999999 9999999988754322233344 3333322 4578
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
.+++|++|+...+..- +. .+-.++|+
T Consensus 117 ~~Ivy~DDR~iH~~~I-we-~~G~V~~~ 142 (164)
T COG4996 117 SEIVYLDDRRIHFGNI-WE-YLGNVKCL 142 (164)
T ss_pred ceEEEEecccccHHHH-HH-hcCCeeee
Confidence 9999999999888777 43 22334544
No 125
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=97.59 E-value=0.00044 Score=56.21 Aligned_cols=94 Identities=20% Similarity=0.213 Sum_probs=65.2
Q ss_pred CCCCCChHHHHH---hCCC--cEEEEcCC-------ChHHHHHHHHHhcCCCCCCceEEcCCCCCh--HHHHHHHHhcCC
Q 027821 88 NRFYPGIPDALK---FASS--RIYIVTTK-------QSRFADALLRELAGVTIPPDRIYGLGTGPK--VEVLKQLQKKPE 153 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~--~laIvTnk-------~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpk--Pe~l~~l~~~~~ 153 (218)
..+.|.+.+.++ +.+. ++.||||+ ....++.+-+. +|+. ++.-...||. .++++.+.....
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~-lgIp----vl~h~~kKP~~~~~i~~~~~~~~~ 132 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA-LGIP----VLRHRAKKPGCFREILKYFKCQKV 132 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh-hCCc----EEEeCCCCCccHHHHHHHHhhccC
Confidence 346667777776 4444 59999998 47778888888 8853 3323334453 345555544311
Q ss_pred -CCCCcEEEEcCCh-hhHHHhhccCccCCceEEEEecCC
Q 027821 154 -LQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 154 -~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
..+.|+++|||.. +|+.+| .. .|+.+|.|+-|-
T Consensus 133 ~~~p~eiavIGDrl~TDVl~g-N~---~G~~tilv~~gv 167 (168)
T PF09419_consen 133 VTSPSEIAVIGDRLFTDVLMG-NR---MGSYTILVTDGV 167 (168)
T ss_pred CCCchhEEEEcchHHHHHHHh-hc---cCceEEEEecCc
Confidence 2578999999996 799999 87 999999998763
No 126
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.58 E-value=0.00028 Score=58.62 Aligned_cols=95 Identities=9% Similarity=0.037 Sum_probs=66.2
Q ss_pred CcEEEEcCCChHHHHHHHHHhcCCCCCCc---eEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC
Q 027821 103 SRIYIVTTKQSRFADALLRELAGVTIPPD---RIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 103 ~~laIvTnk~~~~~~~iL~~~~gl~~~Fd---~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A 179 (218)
..++++|++..+.+...+++ .++..++. .-+......|...++.+++.++++..++++|||+.+|+.+. +. +
T Consensus 108 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml-~~---a 182 (215)
T TIGR01487 108 SLVIMREGKDVDEVREIIKE-RGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLF-RV---V 182 (215)
T ss_pred EEEEecCCccHHHHHHHHHh-CCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH-Hh---C
Confidence 44566788888888888888 88754321 11222234788899999999988888999999999999999 99 8
Q ss_pred CceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 180 GWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 180 Gv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
|+.++ + |-+ .+++++ .++ ++..+
T Consensus 183 g~~va-m--~na-~~~~k~-~A~--~v~~~ 205 (215)
T TIGR01487 183 GFKVA-V--ANA-DDQLKE-IAD--YVTSN 205 (215)
T ss_pred CCeEE-c--CCc-cHHHHH-hCC--EEcCC
Confidence 86544 3 223 344444 235 77654
No 127
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.55 E-value=0.00039 Score=57.97 Aligned_cols=92 Identities=16% Similarity=0.075 Sum_probs=65.4
Q ss_pred cEEEEcCCChHHHHHHHHHhcCCCCCCceEEcC---C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccC
Q 027821 104 RIYIVTTKQSRFADALLRELAGVTIPPDRIYGL---G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 104 ~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~---d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~ 176 (218)
.+.+.+++..+.+...+++ ++.. +..+.+. + ...|+..++.+++.+++++.++++|||+.+|+.+. +.
T Consensus 117 ~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~-~~- 191 (230)
T PRK01158 117 EVALRRTVPVEEVRELLEE-LGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMF-EV- 191 (230)
T ss_pred eeeecccccHHHHHHHHHH-cCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH-Hh-
Confidence 4566677777888888888 7642 3333332 2 23789999999999998999999999999999999 98
Q ss_pred ccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 177 ELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 177 ~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
+|+.+ ++.- .+ +++++ .++ ++..+
T Consensus 192 --ag~~v-am~N--a~-~~vk~-~a~--~v~~~ 215 (230)
T PRK01158 192 --AGFGV-AVAN--AD-EELKE-AAD--YVTEK 215 (230)
T ss_pred --cCceE-EecC--cc-HHHHH-hcc--eEecC
Confidence 88754 4432 33 34444 345 77765
No 128
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.42 E-value=0.00018 Score=61.26 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=54.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC-------CceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD-------GWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A-------Gv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.|...++.++...+....+++||||+.+|+.+. +. + |..++.|.+|- ....++ ++++++++
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~-~~---~~~~~~~~g~~~v~v~~g~------~~~~A~--~~~~~~~~ 234 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAF-RV---VNNQWGNYGFYPVPIGSGS------KKTVAK--FHLTGPQQ 234 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHH-HH---HhcccCCCCeEEEEEecCC------cCCCce--EeCCCHHH
Confidence 567899999988887778899999999999999 88 7 67788887662 123445 99999999
Q ss_pred HHhhcC
Q 027821 213 FSRKLK 218 (218)
Q Consensus 213 l~~~~~ 218 (218)
+.++|+
T Consensus 235 v~~~L~ 240 (244)
T TIGR00685 235 VLEFLG 240 (244)
T ss_pred HHHHHH
Confidence 988873
No 129
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.40 E-value=0.00037 Score=64.85 Aligned_cols=95 Identities=19% Similarity=0.256 Sum_probs=63.1
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCC--------CCCCceEEcCCCCChH----------------
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGV--------TIPPDRIYGLGTGPKV---------------- 142 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl--------~~~Fd~I~g~d~kpkP---------------- 142 (218)
.=|.+..+|+ ++|.++.++||++-.++..+++.++|- .++||.|++...||.-
T Consensus 184 k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~ 263 (448)
T PF05761_consen 184 KDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGK 263 (448)
T ss_dssp --CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSS
T ss_pred CCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCc
Confidence 3477888888 889999999999999999999986654 5899999865432220
Q ss_pred -------------H-----HHHHHHhcCCCCCCcEEEEcCChh-hHHHhhccCccCCceEEEEe
Q 027821 143 -------------E-----VLKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 143 -------------e-----~l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~k~~~~AGv~~i~V~ 187 (218)
. -+..+.+..+....+++||||+.. ||...-+. .||+|++|-
T Consensus 264 l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~---~gWrT~~Ii 324 (448)
T PF05761_consen 264 LKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKR---HGWRTAAII 324 (448)
T ss_dssp EECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHH---H-SEEEEE-
T ss_pred cccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccc---cceEEEEEe
Confidence 0 014444445555678999999874 77777354 699999995
No 130
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.39 E-value=0.00036 Score=60.29 Aligned_cols=78 Identities=12% Similarity=0.027 Sum_probs=57.7
Q ss_pred hCCCcEEEE---cCCChHHHHHHHHHhcCCC----CCCceEEcCCCCChHHHHHHHHhcCCCCC-CcEEEEcCChhhHHH
Q 027821 100 FASSRIYIV---TTKQSRFADALLRELAGVT----IPPDRIYGLGTGPKVEVLKQLQKKPELQG-MTLHFVEDRLATLKN 171 (218)
Q Consensus 100 ~~g~~laIv---Tnk~~~~~~~iL~~~~gl~----~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~-~e~l~IGDs~~Di~a 171 (218)
..++...++ |++..+.+...+++ .++. .+|..|...+ .|...++.+++..++++ .++++|||+.+|+.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~ei~~~~--~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m 222 (273)
T PRK00192 146 DREFSEPFLWNGSEAAKERFEEALKR-LGLKVTRGGRFLHLLGGG--DKGKAVRWLKELYRRQDGVETIALGDSPNDLPM 222 (273)
T ss_pred hcccCCceeecCchHHHHHHHHHHHH-cCCEEEECCeEEEEeCCC--CHHHHHHHHHHHHhccCCceEEEEcCChhhHHH
Confidence 344554444 66666677777777 7775 4444454444 67778999998888899 999999999999999
Q ss_pred hhccCccCCceEE
Q 027821 172 VIKEPELDGWNLY 184 (218)
Q Consensus 172 A~k~~~~AGv~~i 184 (218)
+ +. +|+.++
T Consensus 223 ~-~~---ag~~va 231 (273)
T PRK00192 223 L-EA---ADIAVV 231 (273)
T ss_pred H-Hh---CCeeEE
Confidence 9 98 986544
No 131
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.35 E-value=0.00017 Score=60.40 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=59.7
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhh-HHHhhccCccCCceEEEEecC-CCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLAT-LKNVIKEPELDGWNLYLGDWG-YNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~D-i~aA~k~~~~AGv~~i~V~~G-~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
.||.|..++..+...++++++++||||-.+| +-.| ++ .||+.|.|.+| |...++. .-.+-|+..++++.|-.+
T Consensus 180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGA-q~---~GMrgilVkTGK~rpsDe~-k~~~~p~~~~d~f~~AVd 254 (262)
T KOG3040|consen 180 GKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGA-QA---CGMRGILVKTGKFRPSDEE-KPPVPPDLTADNFADAVD 254 (262)
T ss_pred cCCCHHHHHHHHHhcCCChHHheEEccccccchhhH-hh---hcceeEEeeccccCCcccc-cCCCCcchhhhhHHHHHH
Confidence 4688888999999898999999999998764 6666 99 99999999988 4443443 335667788999888777
Q ss_pred hc
Q 027821 216 KL 217 (218)
Q Consensus 216 ~~ 217 (218)
|+
T Consensus 255 ~I 256 (262)
T KOG3040|consen 255 LI 256 (262)
T ss_pred HH
Confidence 64
No 132
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.34 E-value=0.00026 Score=56.70 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=69.2
Q ss_pred CCChH-HHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhH
Q 027821 91 YPGIP-DALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATL 169 (218)
Q Consensus 91 ~pGv~-e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di 169 (218)
.+|.- .+|.+.|++++|.|.+....++.-.+. +|+...|-.+ ..|-..+..++.++++.++++.||||-.+|+
T Consensus 39 ~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~-LGI~~~~qG~-----~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 39 RDGHGIKLLLKSGIKVAIITGRDSPIVEKRAKD-LGIKHLYQGI-----SDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred cCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHHH-cCCceeeech-----HhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 35543 445599999999999999999999999 9998665422 3666788999999999999999999999999
Q ss_pred HHhhccCccCCceEE
Q 027821 170 KNVIKEPELDGWNLY 184 (218)
Q Consensus 170 ~aA~k~~~~AGv~~i 184 (218)
-.= ++ -|+.+.
T Consensus 113 pvm-~~---vGls~a 123 (170)
T COG1778 113 PVM-EK---VGLSVA 123 (170)
T ss_pred HHH-HH---cCCccc
Confidence 988 77 777554
No 133
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.30 E-value=0.0013 Score=54.46 Aligned_cols=92 Identities=11% Similarity=0.024 Sum_probs=63.4
Q ss_pred cEEEEcCCChHHHHHHHHHhcCCCCCCceEEc---CC----CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccC
Q 027821 104 RIYIVTTKQSRFADALLRELAGVTIPPDRIYG---LG----TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 104 ~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g---~d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~ 176 (218)
...+.+....+.+..++++ ++.. +..+.+ .+ ..+|+..++.+++.++++..++++|||+.+|+.+. +.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~-~~- 183 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKE-LGLN--LVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLF-EV- 183 (225)
T ss_pred eEEEeecCCHHHHHHHHHh-cCce--EEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHH-Hh-
Confidence 3456666677788888888 8764 111111 12 34889999999999999999999999999999999 98
Q ss_pred ccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 177 ELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 177 ~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
+|+. +++ |-.. +++++ .++ ++..+
T Consensus 184 --ag~~-vam--~Na~-~~~k~-~A~--~vt~~ 207 (225)
T TIGR01482 184 --PGFG-VAV--ANAQ-PELKE-WAD--YVTES 207 (225)
T ss_pred --cCce-EEc--CChh-HHHHH-hcC--eecCC
Confidence 8874 444 3233 34444 335 66544
No 134
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.21 E-value=0.002 Score=54.84 Aligned_cols=81 Identities=14% Similarity=0.145 Sum_probs=58.6
Q ss_pred hCCCcEEEEcCCCh-----HHHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCCh
Q 027821 100 FASSRIYIVTTKQS-----RFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRL 166 (218)
Q Consensus 100 ~~g~~laIvTnk~~-----~~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~ 166 (218)
+.-+++.+.+.+.. ..+...+.+ .|+. +..++++. ..+|...++.+++.++++..++++|||+.
T Consensus 117 ~~~~k~~~~~~~~~~~~~~~~l~~~l~~-~~~~--~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ 193 (249)
T TIGR01485 117 QRPHKVSFFLDPEAAPEVIKQLTEMLKE-TGLD--VKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSG 193 (249)
T ss_pred cCCeeEEEEechhhhhHHHHHHHHHHHh-cCCC--EEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECCh
Confidence 44567777665432 233445555 5553 34455442 34999999999999998999999999999
Q ss_pred hhHHHhhccCccCCceEEEEe
Q 027821 167 ATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 167 ~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+|+.+. +. ++..+++|.
T Consensus 194 ND~~ml-~~---~~~~~va~~ 210 (249)
T TIGR01485 194 NDIELF-EI---GSVRGVIVS 210 (249)
T ss_pred hHHHHH-Hc---cCCcEEEEC
Confidence 999999 87 788888885
No 135
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.09 E-value=0.0045 Score=52.16 Aligned_cols=98 Identities=12% Similarity=-0.016 Sum_probs=63.1
Q ss_pred CCCcEEEEcCCC----hHHHHHHHHHhcCCCCCCceEEcC----C----CCChHHHHHHHHhcCCCCCCcEEEEcCChhh
Q 027821 101 ASSRIYIVTTKQ----SRFADALLRELAGVTIPPDRIYGL----G----TGPKVEVLKQLQKKPELQGMTLHFVEDRLAT 168 (218)
Q Consensus 101 ~g~~laIvTnk~----~~~~~~iL~~~~gl~~~Fd~I~g~----d----~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~D 168 (218)
..+++.+..... ...+...+++ .+.. +..+++. + ..+|+..++.+++.++++..++++|||+.+|
T Consensus 111 ~~~~i~~~~~~~~~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD 187 (236)
T TIGR02471 111 GPFKISYLLDPEGEPILPQIRQRLRQ-QSQA--AKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGND 187 (236)
T ss_pred CCeeEEEEECcccchHHHHHHHHHHh-ccCC--EEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccH
Confidence 346666665432 1234455665 5532 3445554 2 3499999999999998888899999999999
Q ss_pred HHHhhccCccCCceEEEEecCCCCHHHHHhccCCCC-eEEcC
Q 027821 169 LKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPR-IQLLQ 209 (218)
Q Consensus 169 i~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~-~~~~~ 209 (218)
+.+. +. +|. .++| |...++ +++....|. ++.++
T Consensus 188 ~~ml-~~---~~~-~iav--~na~~~-~k~~a~~~~~~v~~~ 221 (236)
T TIGR02471 188 EEML-RG---LTL-GVVV--GNHDPE-LEGLRHQQRIYFANN 221 (236)
T ss_pred HHHH-cC---CCc-EEEE--cCCcHH-HHHhhcCCcEEEcCC
Confidence 9999 88 774 3334 544444 444433344 55554
No 136
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.05 E-value=0.0041 Score=60.75 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=69.8
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+-||+.+.++ +.|+++.++|+.+...+..+-++ +|++++ ++.. ...|-+.++.+..+-+ .+.|+|
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~-lGI~~v----~a~~~PedK~~~v~~lq~~g~----~VamvG 515 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE-AGVDDF----IAEATPEDKIALIRQEQAEGK----LVAMTG 515 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCEE----EcCCCHHHHHHHHHHHHHcCC----eEEEEC
Confidence 478899999999 88999999999999999999999 998653 3322 2255667777765432 468999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHH
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKE 195 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~ 195 (218)
|..||.-+- +. |++. +..|-++...
T Consensus 516 DG~NDapAL-~~---AdvG---iAm~~gt~~a 540 (675)
T TIGR01497 516 DGTNDAPAL-AQ---ADVG---VAMNSGTQAA 540 (675)
T ss_pred CCcchHHHH-Hh---CCEe---EEeCCCCHHH
Confidence 999999999 88 8864 3345444433
No 137
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.04 E-value=0.0014 Score=53.71 Aligned_cols=98 Identities=15% Similarity=0.039 Sum_probs=69.3
Q ss_pred cccccccCCCCCChHHHHH---hCCCcEEEEcCCChHH---HHHHHHHhcCCCCCCceEEcCCCCChHHHH--HHHHhcC
Q 027821 81 LTTWIGANRFYPGIPDALK---FASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGLGTGPKVEVL--KQLQKKP 152 (218)
Q Consensus 81 ~~~~~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~---~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l--~~l~~~~ 152 (218)
.+.|.+..-|..-+++++. ++|-+++.+|++.+.. +...|.+-+.|...--+++.++ ||||.-+ ...+.+.
T Consensus 106 n~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-k~k~~qy~Kt~~i~~~ 184 (237)
T COG3700 106 NNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-KPKPGQYTKTQWIQDK 184 (237)
T ss_pred hcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-CCCcccccccHHHHhc
Confidence 4556777778888889988 8999999999877643 3444533277776666677776 4677655 2333333
Q ss_pred CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 153 ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
++. ++-|||.+||.|| |. +|++-|-+.
T Consensus 185 ~~~----IhYGDSD~Di~AA-ke---aG~RgIRil 211 (237)
T COG3700 185 NIR----IHYGDSDNDITAA-KE---AGARGIRIL 211 (237)
T ss_pred Cce----EEecCCchhhhHH-Hh---cCccceeEE
Confidence 322 6899999999999 99 777776664
No 138
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.98 E-value=0.0031 Score=51.97 Aligned_cols=83 Identities=17% Similarity=0.203 Sum_probs=62.9
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce--EEcCC------------------CC-ChH
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR--IYGLG------------------TG-PKV 142 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~--I~g~d------------------~k-pkP 142 (218)
..++=||..++.+ +++++..|+|+...-++..+++. .+=...++. |++.+ -+ .|+
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~-ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~ 149 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEG-IVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKS 149 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHh-hccccceeeeEEeecCceEcCCCceeeecCCccccCCCcc
Confidence 3678899999999 89999999999999999999999 652222221 12221 12 567
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCChhhHHHhhcc
Q 027821 143 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKE 175 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~ 175 (218)
..+..+.+.++ .++|+||+.+|+.|| +.
T Consensus 150 ~vI~~l~e~~e----~~fy~GDsvsDlsaa-kl 177 (220)
T COG4359 150 SVIHELSEPNE----SIFYCGDSVSDLSAA-KL 177 (220)
T ss_pred hhHHHhhcCCc----eEEEecCCcccccHh-hh
Confidence 77777777654 369999999999999 87
No 139
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=96.95 E-value=0.0011 Score=56.04 Aligned_cols=104 Identities=22% Similarity=0.258 Sum_probs=76.9
Q ss_pred cCCCCCChHHHHH---hCC-CcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-----CC------------------
Q 027821 87 ANRFYPGIPDALK---FAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-----TG------------------ 139 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g-~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-----~k------------------ 139 (218)
..+.-||+.++++ +.| +.+.|+|-.+.-+++.+|++ +|+.+.|+.|++.. ++
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea-~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPs 160 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEA-AGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPS 160 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHH-ccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCch
Confidence 3578899999999 555 49999999999999999999 99999999998753 00
Q ss_pred --ChHHHHHHHHh---cCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHH
Q 027821 140 --PKVEVLKQLQK---KPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQK 194 (218)
Q Consensus 140 --pkPe~l~~l~~---~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~ 194 (218)
.|--++.++.. +-++.-++.+||||+-+|+=.-.+- .+..++...-||.-..
T Consensus 161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~L---r~~D~ampRkgfpl~k 217 (256)
T KOG3120|consen 161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRL---RACDVAMPRKGFPLWK 217 (256)
T ss_pred hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhc---ccCceecccCCCchHh
Confidence 12223333322 2244556789999999998766344 7778887777875544
No 140
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=96.90 E-value=0.0021 Score=52.67 Aligned_cols=106 Identities=18% Similarity=0.156 Sum_probs=65.1
Q ss_pred cccCCCCCChHHHHH---hCCCcEEEEcCCChH-------HHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCC
Q 027821 85 IGANRFYPGIPDALK---FASSRIYIVTTKQSR-------FADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPEL 154 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~---~~g~~laIvTnk~~~-------~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~ 154 (218)
....+|+||+.|+|+ +.|..+.++|+.+.. ....-|++.+|...+-+.+++.+ |. ..
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~-K~----------~v-- 135 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD-KT----------LV-- 135 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS-GG----------GC--
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC-CC----------eE--
Confidence 455789999999999 788788888876543 44555666245433345556544 21 11
Q ss_pred CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 155 QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 155 ~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.+. ++|+|++..+..+ .+ +|+++|....-|+.... .-.-+.+.+|+.+.
T Consensus 136 ~~D--vlIDD~~~n~~~~-~~---~g~~~iLfd~p~Nr~~~-------~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 136 GGD--VLIDDRPHNLEQF-AN---AGIPVILFDQPYNRDES-------NFPRVNNWEEIEDL 184 (191)
T ss_dssp --S--EEEESSSHHHSS--SS---ESSEEEEE--GGGTT---------TSEEE-STTSHHHH
T ss_pred ecc--EEecCChHHHHhc-cC---CCceEEEEcCCCCCCCC-------CCccCCCHHHHHHH
Confidence 233 7999999999999 88 99999999877655432 22567888877543
No 141
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.69 E-value=0.012 Score=57.67 Aligned_cols=107 Identities=18% Similarity=0.165 Sum_probs=76.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++-||+.+.++ +.|+++.++|+-+...+..+-++ +|+++ +++.. +..|-+.++.+..+-+ -+.|+|
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGId~----v~A~~~PedK~~iV~~lQ~~G~----~VaMtG 514 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDD----FLAEATPEDKLALIRQEQAEGR----LVAMTG 514 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCcE----EEccCCHHHHHHHHHHHHHcCC----eEEEEC
Confidence 467899999999 88999999999999999999999 99965 33333 2356667777776432 247999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEc--ChhHHH
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLL--QLSDFS 214 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~--~~~~l~ 214 (218)
|..||.-|= +. |.+ |+.-|.++.-..+ .+| .++. ++..+.
T Consensus 515 DGvNDAPAL-a~---ADV---GIAMgsGTdvAke--AAD--iVLldd~~s~Iv 556 (679)
T PRK01122 515 DGTNDAPAL-AQ---ADV---GVAMNSGTQAAKE--AGN--MVDLDSNPTKLI 556 (679)
T ss_pred CCcchHHHH-Hh---CCE---eEEeCCCCHHHHH--hCC--EEEeCCCHHHHH
Confidence 999999998 87 775 4445544443333 335 5442 455444
No 142
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.56 E-value=0.011 Score=58.13 Aligned_cols=111 Identities=18% Similarity=0.227 Sum_probs=80.4
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVED 164 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGD 164 (218)
..+-|+..++++ +.|+++.+.|+-+++.++.+-++ +||++++..+ -+..|-+.++++..+- ..+.||||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~-lGId~v~Ael---lPedK~~~V~~l~~~g----~~VamVGD 607 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKE-LGIDEVRAEL---LPEDKAEIVRELQAEG----RKVAMVGD 607 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cChHhheccC---CcHHHHHHHHHHHhcC----CEEEEEeC
Confidence 578899999999 99999999999999999999999 9996554322 1336677888888543 34589999
Q ss_pred ChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 165 RLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 165 s~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
..||.-|= .. |.+ |+.-|.++.-..+.++-. .+=+++.++..
T Consensus 608 GINDAPAL-A~---AdV---GiAmG~GtDvA~eaADvv--L~~~dL~~v~~ 649 (713)
T COG2217 608 GINDAPAL-AA---ADV---GIAMGSGTDVAIEAADVV--LMRDDLSAVPE 649 (713)
T ss_pred CchhHHHH-hh---cCe---eEeecCCcHHHHHhCCEE--EecCCHHHHHH
Confidence 99999887 66 553 555565554444444322 44455766654
No 143
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.46 E-value=0.018 Score=56.27 Aligned_cols=107 Identities=15% Similarity=0.096 Sum_probs=76.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
.++-||+.+.++ +.|+++.++|+-+...+..+-++ +|++++| +.- +..|-+.++.+..+- .-+.|+|
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e-lGI~~v~----A~~~PedK~~iV~~lQ~~G----~~VaMtG 510 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE-AGVDRFV----AECKPEDKINVIREEQAKG----HIVAMTG 510 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCceEE----cCCCHHHHHHHHHHHHhCC----CEEEEEC
Confidence 478899999999 78999999999999999999999 9997543 222 225556677776542 2357999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHH
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFS 214 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~ 214 (218)
|..||.-|= +. |.+ |+.-|.++.-..+ .+| .++ +++..+.
T Consensus 511 DGvNDAPAL-a~---ADV---GIAMgsGTdvAke--AAD--iVLldd~ls~Iv 552 (673)
T PRK14010 511 DGTNDAPAL-AE---ANV---GLAMNSGTMSAKE--AAN--LIDLDSNPTKLM 552 (673)
T ss_pred CChhhHHHH-Hh---CCE---EEEeCCCCHHHHH--hCC--EEEcCCCHHHHH
Confidence 999999998 87 775 5555544443333 345 554 3455554
No 144
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.25 E-value=0.013 Score=43.48 Aligned_cols=83 Identities=20% Similarity=0.310 Sum_probs=48.4
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChH---HHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~---~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
...++||+.|+|+ ++|.++.++||++.. .....|++ +|+.--.+.|+++. ......+.+.. ....++
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~-~Gi~~~~~~i~ts~-----~~~~~~l~~~~-~~~~v~ 84 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK-LGIPVDEDEIITSG-----MAAAEYLKEHK-GGKKVY 84 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH-TTTT--GGGEEEHH-----HHHHHHHHHHT-TSSEEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh-cCcCCCcCEEEChH-----HHHHHHHHhcC-CCCEEE
Confidence 3578999999999 889999999997743 34455577 88875555555432 33333333311 244567
Q ss_pred EEcCChhhHHHhhccCccCCc
Q 027821 161 FVEDRLATLKNVIKEPELDGW 181 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv 181 (218)
+||-. ...+.. +. +|+
T Consensus 85 vlG~~-~l~~~l-~~---~G~ 100 (101)
T PF13344_consen 85 VLGSD-GLREEL-RE---AGF 100 (101)
T ss_dssp EES-H-HHHHHH-HH---TTE
T ss_pred EEcCH-HHHHHH-HH---cCC
Confidence 78754 333333 55 654
No 145
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.24 E-value=0.044 Score=55.58 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=76.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc-----------------------eEEcCC-CCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPD-----------------------RIYGLG-TGP 140 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd-----------------------~I~g~d-~kp 140 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+...-. .|++.- +..
T Consensus 578 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~-~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~ 656 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARN-CGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLD 656 (941)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHH
Confidence 378899999999 88999999999999999999999 99963211 233332 224
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecC-CCCHHHHHhccCCCCeEEc--ChhHHH
Q 027821 141 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWG-YNTQKEREEAASIPRIQLL--QLSDFS 214 (218)
Q Consensus 141 kPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G-~~~~~~l~~a~~~p~~~~~--~~~~l~ 214 (218)
|-.+++.+.+. + .-+.|+||..||.-|= ++ |.+ |+.-| .++. .....+| +++. ++..+.
T Consensus 657 K~~iV~~lq~~-g---~vVam~GDGvNDapAL-k~---AdV---GIAmg~~gtd--vAk~aAD--ivL~dd~f~~I~ 718 (941)
T TIGR01517 657 KQLLVLMLKDM-G---EVVAVTGDGTNDAPAL-KL---ADV---GFSMGISGTE--VAKEASD--IILLDDNFASIV 718 (941)
T ss_pred HHHHHHHHHHC-C---CEEEEECCCCchHHHH-Hh---CCc---ceecCCCccH--HHHHhCC--EEEecCCHHHHH
Confidence 45566666653 2 2457999999999998 88 776 34345 2332 2333456 6665 455444
No 146
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.18 E-value=0.032 Score=47.61 Aligned_cols=81 Identities=17% Similarity=0.095 Sum_probs=57.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHH---HHHHHHHhcCCCCCCceEEcC--CCCC------hHHHHHHHHhcC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGL--GTGP------KVEVLKQLQKKP 152 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~---~~~iL~~~~gl~~~Fd~I~g~--d~kp------kPe~l~~l~~~~ 152 (218)
..++.||+.++++ ++|++++++|+++... +..-|++ .|+..+ +.++-. +... |.+...++..+
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~-~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~- 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLIN-AGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEE- 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHH-cCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhC-
Confidence 4689999999999 8999999999999766 7788888 898876 444332 2122 34444455432
Q ss_pred CCCCCcEEEEcCChhhHHHh
Q 027821 153 ELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA 172 (218)
+..-. ..|||..+|+..+
T Consensus 195 GYrIv--~~iGDq~sDl~G~ 212 (229)
T TIGR01675 195 GYRIW--GNIGDQWSDLLGS 212 (229)
T ss_pred CceEE--EEECCChHHhcCC
Confidence 22222 5899999999665
No 147
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.12 E-value=0.043 Score=46.62 Aligned_cols=61 Identities=11% Similarity=0.085 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLS 211 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~ 211 (218)
.|...++.+++.++++..++++|||+.+|+.+. +. +|+.++ + |-. .+.++. .++ +++.+..
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~-~~---~~~~~a-~--~na-~~~~k~-~a~--~~~~~n~ 248 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEML-EA---AGYGVA-M--GNA-DEELKA-LAD--YVTDSNN 248 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHH-Hh---CCceeE-e--cCc-hHHHHH-hCC--EEecCCC
Confidence 788899999999988889999999999999999 98 887533 3 333 344444 345 7766543
No 148
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.04 E-value=0.04 Score=54.86 Aligned_cols=110 Identities=16% Similarity=0.174 Sum_probs=79.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+-|++..++. +.|++++++|+-+...++.+-++ .| +|.|++.- ...|.+.++++..+-+ .+.|||
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~-VG----i~~V~aev~P~~K~~~Ik~lq~~~~----~VaMVG 792 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQ-VG----IDNVYAEVLPEQKAEKIKEIQKNGG----PVAMVG 792 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHh-hC----cceEEeccCchhhHHHHHHHHhcCC----cEEEEe
Confidence 467899988888 89999999999999999999999 99 67777765 4477889999987643 347999
Q ss_pred CChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 164 DRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
|..||--|= .. |. +|+.-|.++.-..+. +|=-.+-+++.+++.
T Consensus 793 DGINDaPAL-A~---Ad---VGIaig~gs~vAiea--ADIVLmrn~L~~v~~ 835 (951)
T KOG0207|consen 793 DGINDAPAL-AQ---AD---VGIAIGAGSDVAIEA--ADIVLMRNDLRDVPF 835 (951)
T ss_pred CCCCccHHH-Hh---hc---cceeeccccHHHHhh--CCEEEEccchhhhHH
Confidence 999998766 44 43 345555554433333 351133455666543
No 149
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=95.95 E-value=0.045 Score=56.23 Aligned_cols=112 Identities=17% Similarity=0.176 Sum_probs=74.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC----------ceEE--------------------
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP----------DRIY-------------------- 134 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F----------d~I~-------------------- 134 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +||.... +.++
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~-~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQE-VGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 378899999999 89999999999999999999999 9995321 1122
Q ss_pred ---cCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC-
Q 027821 135 ---GLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ- 209 (218)
Q Consensus 135 ---g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~- 209 (218)
+.. +..|-++++.+... + .-+.|+||..||.-|= +. |++- +.-|....+. ....+| +++.+
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaL-k~---AdVG---IAmg~~gt~v-ak~aAD--ivl~dd 789 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRR-K---AFCAMTGDGVNDSPSL-KM---ANVG---IAMGINGSDV-AKDASD--IVLSDD 789 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhc-C---CeeEEeCCCcchHHHH-Hh---CCcc---EecCCCccHH-HHHhcC--EEEecC
Confidence 211 11334455555543 2 2357999999999998 88 8763 3345322233 233456 66643
Q ss_pred -hhHHH
Q 027821 210 -LSDFS 214 (218)
Q Consensus 210 -~~~l~ 214 (218)
+..+.
T Consensus 790 ~f~~I~ 795 (1053)
T TIGR01523 790 NFASIL 795 (1053)
T ss_pred CHHHHH
Confidence 55544
No 150
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.90 E-value=0.073 Score=53.59 Aligned_cols=85 Identities=15% Similarity=0.222 Sum_probs=63.2
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----------------------EEcCC-CCCh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----------------------IYGLG-TGPK 141 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----------------------I~g~d-~kpk 141 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+..- +. |++.- +..|
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~-lGI~~~-~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K 591 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQE-VGIDAN-DFLLGADIEELSDEELARELRKYHIFARLTPMQK 591 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCC-CeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHH
Confidence 468899999999 89999999999999999999999 999621 12 22221 1234
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
-.+++.+... ...+.|+||..||.-|= +. |.+-
T Consensus 592 ~~iV~~lq~~----G~vVam~GDGvNDapAL-k~---AdVG 624 (867)
T TIGR01524 592 SRIIGLLKKA----GHTVGFLGDGINDAPAL-RK---ADVG 624 (867)
T ss_pred HHHHHHHHhC----CCEEEEECCCcccHHHH-Hh---CCEE
Confidence 4455555543 23457999999999999 88 8864
No 151
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.89 E-value=0.054 Score=54.75 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=73.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----------------------EEcCC-CCCh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----------------------IYGLG-TGPK 141 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----------------------I~g~d-~kpk 141 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+..- +. |++.- +..|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~-lGI~~~-~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 549 DPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICRE-VGLEPG-EPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred CccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCC-CccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 478899999999 89999999999999999999999 999521 11 22221 1133
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE--cChhHHH
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL--LQLSDFS 214 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~--~~~~~l~ 214 (218)
-.+++.+... + .-+.|+||..||.-|= +. |.+- |++ |.++ +.....+| .++ +++..+.
T Consensus 627 ~~iV~~Lq~~-G---~vVamtGDGvNDaPAL-k~---ADVG-IAm--g~gt--dvAkeaAD--iVLldd~f~~Iv 686 (903)
T PRK15122 627 SRVLKALQAN-G---HTVGFLGDGINDAPAL-RD---ADVG-ISV--DSGA--DIAKESAD--IILLEKSLMVLE 686 (903)
T ss_pred HHHHHHHHhC-C---CEEEEECCCchhHHHH-Hh---CCEE-EEe--Cccc--HHHHHhcC--EEEecCChHHHH
Confidence 4455666543 2 3457999999999998 88 8764 334 4233 33333456 665 3444443
No 152
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.81 E-value=0.045 Score=55.29 Aligned_cols=103 Identities=15% Similarity=0.119 Sum_probs=70.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----------------------EEcCC-CCCh
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----------------------IYGLG-TGPK 141 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----------------------I~g~d-~kpk 141 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +||..- .. |++.- +..|
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~-~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K 626 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHE-VGLDAG-EVLIGSDIETLSDDELANLAERTTLFARLTPMHK 626 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCcc-CceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHH
Confidence 467899999999 89999999999999999999999 999521 11 22221 1133
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL 207 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~ 207 (218)
-.+++.+... + .-+.|+||..||.-|= +. |.+ |+.-|.++ +.....+| .++
T Consensus 627 ~~IV~~Lq~~-G---~vVam~GDGvNDaPAL-k~---ADV---GIAmg~gt--dvAkeaAD--iVL 677 (902)
T PRK10517 627 ERIVTLLKRE-G---HVVGFMGDGINDAPAL-RA---ADI---GISVDGAV--DIAREAAD--IIL 677 (902)
T ss_pred HHHHHHHHHC-C---CEEEEECCCcchHHHH-Hh---CCE---EEEeCCcC--HHHHHhCC--EEE
Confidence 4455655543 2 2357999999999998 88 775 33334333 33333556 665
No 153
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=95.81 E-value=0.061 Score=46.64 Aligned_cols=87 Identities=15% Similarity=0.198 Sum_probs=54.1
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCC---hHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEE
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQ---SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLH 160 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~---~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l 160 (218)
...++||+.++|+ ++|++++++||++ +.....-|++ +|+....+-|+++. ......+.+.......++
T Consensus 16 ~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~-~G~~~~~~~i~ts~-----~~~~~~l~~~~~~~~~v~ 89 (279)
T TIGR01452 16 GERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR-LGFNGLAEQLFSSA-----LCAARLLRQPPDAPKAVY 89 (279)
T ss_pred CCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCChhhEecHH-----HHHHHHHHhhCcCCCEEE
Confidence 3468999999998 7899999999955 4444456787 89865555554432 333333333211234578
Q ss_pred EEcCChhhHHHhhccCccCCceEE
Q 027821 161 FVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 161 ~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+||+.. -.+.. +. +|+..+
T Consensus 90 ~iG~~~-~~~~l-~~---~g~~~~ 108 (279)
T TIGR01452 90 VIGEEG-LRAEL-DA---AGIRLA 108 (279)
T ss_pred EEcCHH-HHHHH-HH---CCCEEe
Confidence 899852 22333 55 676644
No 154
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.80 E-value=0.0096 Score=48.75 Aligned_cols=41 Identities=15% Similarity=0.014 Sum_probs=36.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+|+..++.++++.+.+..++++|||+.+|+.++ +. +|+.++
T Consensus 163 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~-~~---~~~~va 203 (204)
T TIGR01484 163 DKGSALQALLKELNGKRDEILAFGDSGNDEEMF-EV---AGLAVA 203 (204)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHH-HH---cCCceE
Confidence 899999999999888889999999999999999 88 887543
No 155
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.78 E-value=0.062 Score=53.26 Aligned_cols=86 Identities=15% Similarity=0.147 Sum_probs=63.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC---ce-----------------------EEcCC-
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPP---DR-----------------------IYGLG- 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F---d~-----------------------I~g~d- 137 (218)
.++-|++.++++ +.|+++.++|+-+...+..+-++ +|+.... +. +++.-
T Consensus 441 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~-lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~ 519 (755)
T TIGR01647 441 DPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARR-LGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVF 519 (755)
T ss_pred CCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecC
Confidence 478899999999 89999999999999999999999 9996420 00 22222
Q ss_pred CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 138 TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 138 ~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
+..|-.+++.+..+- .-+.|+||..||.-|= +. |.+-
T Consensus 520 Pe~K~~iV~~lq~~G----~~VamvGDGvNDapAL-~~---AdVG 556 (755)
T TIGR01647 520 PEHKYEIVEILQKRG----HLVGMTGDGVNDAPAL-KK---ADVG 556 (755)
T ss_pred HHHHHHHHHHHHhcC----CEEEEEcCCcccHHHH-Hh---CCee
Confidence 123444556665432 3457999999999988 88 8764
No 156
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.76 E-value=0.12 Score=41.34 Aligned_cols=89 Identities=18% Similarity=0.247 Sum_probs=57.9
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHH---HHHHHhc---CCCCCCceEEcCC---C--------C--C---hHH
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFAD---ALLRELA---GVTIPPDRIYGLG---T--------G--P---KVE 143 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~---~iL~~~~---gl~~~Fd~I~g~d---~--------k--p---kPe 143 (218)
...||+.++++ ++|++++++|+++...+. ..|+. + |..-....++++. . . | |.+
T Consensus 27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~-~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~ 105 (157)
T smart00775 27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ-IKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIA 105 (157)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH-hhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHH
Confidence 46799999999 899999999999987764 55554 3 3322223454433 1 1 2 344
Q ss_pred HHHHHHhcCCCCCCcEE-EEcCChhhHHHhhccCccCCce
Q 027821 144 VLKQLQKKPELQGMTLH-FVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l-~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
.+..+...+.-.....+ -+||+.+|+++= ++ +|++
T Consensus 106 ~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y-~~---~gi~ 141 (157)
T smart00775 106 CLRDIKSLFPPQGNPFYAGFGNRITDVISY-SA---VGIP 141 (157)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCchhHHHH-HH---cCCC
Confidence 55666654431222333 388999999998 88 7874
No 157
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.75 E-value=0.083 Score=53.99 Aligned_cols=39 Identities=23% Similarity=0.353 Sum_probs=36.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.+|-|++.++++ ++|+++.++|+.+...+..+.++ +|+-
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~-~gi~ 608 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG-VGII 608 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 367899999999 89999999999999999999999 9994
No 158
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.60 E-value=0.0037 Score=49.39 Aligned_cols=82 Identities=15% Similarity=0.083 Sum_probs=56.5
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCC-CCCCceEEcCCC-C--ChHHHHHHHHhcCCCCCCcEEE
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV-TIPPDRIYGLGT-G--PKVEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl-~~~Fd~I~g~d~-k--pkPe~l~~l~~~~~~~~~e~l~ 161 (218)
..+-||+.++|+ ...+.++|.|+..+.+++.+++. ++- ..+|+.+++.+. . .+.. .+. +...+.+..++++
T Consensus 35 v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~-ldp~~~~~~~~~~r~~~~~~~~~~-~Kd-L~~l~~~~~~vvi 111 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDA-LDPNGKLFSRRLYRDDCTFDKGSY-IKD-LSKLGRDLDNVVI 111 (159)
T ss_dssp EEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHH-HTTTTSSEEEEEEGGGSEEETTEE-E---GGGSSS-GGGEEE
T ss_pred EeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHh-hhhhcccccccccccccccccccc-ccc-hHHHhhccccEEE
Confidence 457899999999 78899999999999999999999 887 578998887651 1 1111 122 2233335788999
Q ss_pred EcCChhhHHHh
Q 027821 162 VEDRLATLKNV 172 (218)
Q Consensus 162 IGDs~~Di~aA 172 (218)
|+|++.-...-
T Consensus 112 vDD~~~~~~~~ 122 (159)
T PF03031_consen 112 VDDSPRKWALQ 122 (159)
T ss_dssp EES-GGGGTTS
T ss_pred EeCCHHHeecc
Confidence 99999866544
No 159
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=95.56 E-value=0.021 Score=48.77 Aligned_cols=59 Identities=12% Similarity=0.034 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
.|...++.+++.++++.++++.|||+.||+.+- +. +|+ .+++ |-..+ +++. .++ ++..+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml-~~---ag~-~vAm--~NA~~-~vK~-~A~--~vt~~ 254 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMI-EY---AGV-GVAM--GNAIP-SVKE-VAQ--FVTKS 254 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHH-Hh---CCc-eEEe--cCccH-HHHH-hcC--eeccC
Confidence 888999999999999999999999999999999 98 997 3334 44444 4444 235 66654
No 160
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=95.40 E-value=0.086 Score=44.91 Aligned_cols=63 Identities=8% Similarity=-0.049 Sum_probs=43.9
Q ss_pred ChHHHHHHHHhcCCCC--CCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhc--cCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQ--GMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA--ASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~--~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a--~~~p~~~~~~ 209 (218)
.|...++.+++.++++ ..++++|||+.+|+.+. +. +|..+ ++..+....+++++. .++ ++..+
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml-~~---ag~~v-am~Na~~~~~~lk~~~~a~~--~vt~~ 242 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLL-EV---VDLAV-VVPGPNGPNVSLKPGDPGSF--LLTPA 242 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHH-HH---CCEEE-EeCCCCCCccccCccCCCcE--EEcCC
Confidence 7777888888888777 88999999999999999 88 88644 443332212345443 123 66655
No 161
>PRK10976 putative hydrolase; Provisional
Probab=95.26 E-value=0.028 Score=47.98 Aligned_cols=61 Identities=13% Similarity=0.060 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
.|...++.+++.++++.++++.|||+.||+.+- +. +|.. +++ |-.+++..+.|.++ +++.+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml-~~---ag~~-vAm--~NA~~~vK~~A~~~--~v~~~ 250 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEML-SM---AGKG-CIM--GNAHQRLKDLLPEL--EVIGS 250 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHH-HH---cCCC-eee--cCCcHHHHHhCCCC--eeccc
Confidence 788999999999999999999999999999999 98 9973 444 43444444444333 45544
No 162
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=94.72 E-value=0.099 Score=45.64 Aligned_cols=52 Identities=35% Similarity=0.522 Sum_probs=37.8
Q ss_pred ccCCCCCChHHHHH---hCCCcEEEEcCCChHHHH---HHHHHhcCCCCCCceEEcCC
Q 027821 86 GANRFYPGIPDALK---FASSRIYIVTTKQSRFAD---ALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 86 ~~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~---~iL~~~~gl~~~Fd~I~g~d 137 (218)
....++||+.++|+ ++|+++.++||++...-+ .-|+.+.+++...+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 34689999999999 899999999998765433 33333145556677777664
No 163
>PLN02887 hydrolase family protein
Probab=94.44 E-value=0.2 Score=48.27 Aligned_cols=59 Identities=8% Similarity=0.000 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQ 209 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~ 209 (218)
.|...++.+++.++++.++++.|||+.||+.+- +. ||+. |++ |..+++. ++ .++ ++..+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeML-e~---AG~g-VAM--gNA~eeV-K~-~Ad--~VT~s 565 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEML-QL---ASLG-VAL--SNGAEKT-KA-VAD--VIGVS 565 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHH-HH---CCCE-EEe--CCCCHHH-HH-hCC--EEeCC
Confidence 888999999999999999999999999999999 98 9963 334 5455444 33 346 77654
No 164
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=94.33 E-value=0.13 Score=44.05 Aligned_cols=53 Identities=17% Similarity=0.090 Sum_probs=42.1
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhc
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA 199 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a 199 (218)
.|-..++.+++.++++.++++.|||+.||+.+= +. +|. .+++ |-..++..+.|
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml-~~---ag~-~vAm--~Na~~~vK~~A 240 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREML-GS---VGR-GFIM--GNAMPQLRAEL 240 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHH-HH---cCC-ceec--cCChHHHHHhC
Confidence 788899999999999999999999999999999 88 885 4444 43444444333
No 165
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=94.14 E-value=0.24 Score=50.96 Aligned_cols=39 Identities=15% Similarity=0.336 Sum_probs=35.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.+|-|||+++++ ++|+++.++|+-..+.+..+-+. +|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~-~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYS-CRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHH-hCCC
Confidence 478999999999 89999999999999999999888 8873
No 166
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=93.61 E-value=0.28 Score=46.04 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=61.6
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEc
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVE 163 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IG 163 (218)
..+.|++.++++ +.|+++.++|+.....+..+-++ +|+ ++.- ...|-+.+..+...- ..+.|||
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~-lgi-------~~~~~p~~K~~~v~~l~~~g----~~v~~vG 413 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE-LGI-------FARVTPEEKAALVEALQKKG----RVVAMTG 413 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCc-------eeccCHHHHHHHHHHHHHCC----CEEEEEC
Confidence 478999999999 88999999999999999999999 987 2221 224556666665432 3468999
Q ss_pred CChhhHHHhhccCccCCce
Q 027821 164 DRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 164 Ds~~Di~aA~k~~~~AGv~ 182 (218)
|..+|.-+- +. |++-
T Consensus 414 Dg~nD~~al-~~---Advg 428 (499)
T TIGR01494 414 DGVNDAPAL-KK---ADVG 428 (499)
T ss_pred CChhhHHHH-Hh---CCCc
Confidence 999999988 77 7743
No 167
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=93.55 E-value=0.046 Score=46.46 Aligned_cols=80 Identities=18% Similarity=0.254 Sum_probs=57.5
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCCCceEEcCC-C-CC------hHHHHHHHHhc-C
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGLG-T-GP------KVEVLKQLQKK-P 152 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~Fd~I~g~d-~-kp------kPe~l~~l~~~-~ 152 (218)
..+.||+.++++ ++|++++++||++. +.+..-|++ .|+..+-..+.-.+ . .+ |.+-...+.++ +
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~-~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy 192 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKK-AGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGY 192 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHH-HTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHH-cCCCccchhccccccccccccccccchHHHHHHHHcCC
Confidence 478999999999 99999999998665 467777888 89775544443332 1 22 44455566655 3
Q ss_pred CCCCCcEEEEcCChhhHHHh
Q 027821 153 ELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA 172 (218)
.+ +.+|||...|+..+
T Consensus 193 ~I----i~~iGD~~~D~~~~ 208 (229)
T PF03767_consen 193 RI----IANIGDQLSDFSGA 208 (229)
T ss_dssp EE----EEEEESSGGGCHCT
T ss_pred cE----EEEeCCCHHHhhcc
Confidence 32 37999999999995
No 168
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.53 E-value=0.36 Score=48.97 Aligned_cols=90 Identities=16% Similarity=0.269 Sum_probs=65.7
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc--eEE-cCC--CCCh-----------------H
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIY-GLG--TGPK-----------------V 142 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd--~I~-g~d--~kpk-----------------P 142 (218)
.+|-++++++++ ++|+++-++|+-+...+..+=++ +|+..--+ .++ |.+ ...+ |
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~-~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP 624 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKE-CGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSP 624 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHH-cCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCH
Confidence 578999999999 99999999999999999999999 99865432 243 433 1122 1
Q ss_pred ----HHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 143 ----EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 143 ----e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.+++.+.+. + .-+.|+||..||+-|= |. |.+-+..+
T Consensus 625 ~qK~~IV~~lq~~-g---~vVamtGDGvNDapAL-k~---ADVGIamg 664 (917)
T COG0474 625 EQKARIVEALQKS-G---HVVAMTGDGVNDAPAL-KA---ADVGIAMG 664 (917)
T ss_pred HHHHHHHHHHHhC-C---CEEEEeCCCchhHHHH-Hh---cCccEEec
Confidence 123334433 3 3457999999999999 98 88755433
No 169
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=93.51 E-value=0.71 Score=39.83 Aligned_cols=96 Identities=20% Similarity=0.276 Sum_probs=68.0
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHH---HHHHhcCCCCCCce-----EE------cC-C------------CC-
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADA---LLRELAGVTIPPDR-----IY------GL-G------------TG- 139 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~---iL~~~~gl~~~Fd~-----I~------g~-d------------~k- 139 (218)
=+.++++++ ++|+++..+|..+...... -|++ +|++.-=.. ++ .. . .+
T Consensus 83 e~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~-~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~ 161 (252)
T PF11019_consen 83 ESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKS-LGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQ 161 (252)
T ss_pred chhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHH-CCCCccccccccCcceecccccCCCCCCceeecCeEEeCCC
Confidence 356777777 8999999999988765444 4555 666411110 00 00 0 12
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHH---hhccCccCCceEEEEecCC
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKN---VIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~a---A~k~~~~AGv~~i~V~~G~ 190 (218)
+|.+++..++...+..+..++||+|+...+++ |.++ .|+.++|.-|..
T Consensus 162 ~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~---~~I~f~G~~Yt~ 212 (252)
T PF11019_consen 162 DKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKK---SGIDFIGFHYTG 212 (252)
T ss_pred ccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhh---CCCcEEEEEEcc
Confidence 77888999998888888899999999988753 2267 899999998875
No 170
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.47 E-value=0.11 Score=43.84 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=33.1
Q ss_pred ChHHHHHHHHhcCCC--CCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 140 PKVEVLKQLQKKPEL--QGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 140 pkPe~l~~l~~~~~~--~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
.|+..++.+++..++ +..++++|||+.+|+.+- +. +|+.++
T Consensus 181 sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml-~~---ag~~v~ 223 (225)
T TIGR02461 181 DKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMF-EV---VDLAFL 223 (225)
T ss_pred CHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHH-Hh---CCCcEe
Confidence 778888777766644 566899999999999999 98 887543
No 171
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=93.36 E-value=0.45 Score=41.00 Aligned_cols=81 Identities=14% Similarity=0.220 Sum_probs=58.3
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHH----HHHHHHHhcCCCCCCc-eE-EcCCCCChHHHHHHHHhcCCCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRF----ADALLRELAGVTIPPD-RI-YGLGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~----~~~iL~~~~gl~~~Fd-~I-~g~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
..++.||+.|+|+ .+|.++.-+||+.++. +..-|++ .||..--+ .+ +=.+.++|..-...+.+.+.
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~-~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~~---- 194 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKS-EGLPQVLESHLLLKKDKKSKEVRRQAVEKDYK---- 194 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHH-cCcccccccceEEeeCCCcHHHHHHHHhhccc----
Confidence 4689999999999 8999999999998865 6667777 78864332 22 22234466655555555443
Q ss_pred cEEEEcCChhhHHHh
Q 027821 158 TLHFVEDRLATLKNV 172 (218)
Q Consensus 158 e~l~IGDs~~Di~aA 172 (218)
-+++|||...|....
T Consensus 195 iVm~vGDNl~DF~d~ 209 (274)
T COG2503 195 IVMLVGDNLDDFGDN 209 (274)
T ss_pred eeeEecCchhhhcch
Confidence 348999999998765
No 172
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=93.32 E-value=0.18 Score=41.44 Aligned_cols=62 Identities=16% Similarity=0.091 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhH
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSD 212 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~ 212 (218)
.|-..++.+++.++++..+++.|||+.+|+.+- +. +|.. +++ |..++ +++. .++ ++..+-.+
T Consensus 186 sK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml-~~---~~~~-~am--~na~~-~~k~-~a~--~i~~~~~~ 247 (254)
T PF08282_consen 186 SKGSAIKYLLEYLGISPEDIIAFGDSENDIEML-EL---AGYS-VAM--GNATP-ELKK-AAD--YITPSNND 247 (254)
T ss_dssp SHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHH-HH---SSEE-EEE--TTS-H-HHHH-HSS--EEESSGTC
T ss_pred CHHHHHHHHhhhcccccceeEEeecccccHhHH-hh---cCeE-EEE--cCCCH-HHHH-hCC--EEecCCCC
Confidence 788899999999998889999999999999999 88 8754 445 44444 4433 335 66665544
No 173
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=93.31 E-value=0.61 Score=39.85 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=70.4
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcC-------CCCCCceEEcCCCCChHHHHHHHHhcCCCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAG-------VTIPPDRIYGLGTGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~g-------l~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~ 156 (218)
....|+.|..+++ ..|++++|-|+.+....+.+..+ .+ ++.|||.-+|. |.-...+.++....+.++
T Consensus 121 k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~-s~~gdl~~y~~gyfDt~iG~--K~e~~sy~~I~~~Ig~s~ 197 (254)
T KOG2630|consen 121 KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGY-SDAGDLRKYISGYFDTTIGL--KVESQSYKKIGHLIGKSP 197 (254)
T ss_pred cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcc-cCcchHHHHhhhhhhccccc--eehhHHHHHHHHHhCCCh
Confidence 3478999999999 89999999999887655554443 32 23555543332 233457777777777777
Q ss_pred CcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 157 MTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.|++|.=|-+.-..|| +. +|+.+..+.
T Consensus 198 ~eiLfLTd~~~Ea~aa-~~---aGl~a~l~~ 224 (254)
T KOG2630|consen 198 REILFLTDVPREAAAA-RK---AGLQAGLVS 224 (254)
T ss_pred hheEEeccChHHHHHH-Hh---cccceeeee
Confidence 8999999999999999 88 999888773
No 174
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.22 E-value=0.12 Score=44.47 Aligned_cols=66 Identities=6% Similarity=-0.171 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhcCCC---CCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcCh
Q 027821 140 PKVEVLKQLQKKPEL---QGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQL 210 (218)
Q Consensus 140 pkPe~l~~l~~~~~~---~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~ 210 (218)
.|-..++.+++.+++ +.++++.|||+.||+.+= +. +|. .+++.-+-.+.+.++.....++++...+
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml-~~---ag~-gvAM~~~~~~~~~l~~~~~~~~~~~~~~ 255 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLL-DV---MDY-AVVVKGLNREGVHLQDDDPARVYRTQRE 255 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHH-Hh---CCE-EEEecCCCCCCcccccccCCceEeccCC
Confidence 788889999998888 889999999999999999 98 885 3444222212123433333344665544
No 175
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=92.81 E-value=0.25 Score=42.79 Aligned_cols=65 Identities=20% Similarity=0.142 Sum_probs=48.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC---CceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD---GWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRK 216 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A---Gv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~ 216 (218)
.|-..++++++.+++...++++|||..+|+.+= +. + +-.+|+| |-.. -.+. +.+++++++..|
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf-~~---~~~~~g~~vav--g~a~------~~A~--~~l~~~~~v~~~ 239 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGF-AV---VNRLGGISVKV--GTGA------TQAS--WRLAGVPDVWSW 239 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHH-HH---HHhcCCeEEEE--CCCC------CcCe--EeCCCHHHHHHH
Confidence 677888999998887888999999999998886 54 4 3355556 4222 1234 789999999988
Q ss_pred cC
Q 027821 217 LK 218 (218)
Q Consensus 217 ~~ 218 (218)
|+
T Consensus 240 L~ 241 (266)
T PRK10187 240 LE 241 (266)
T ss_pred HH
Confidence 74
No 176
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=92.36 E-value=0.24 Score=42.60 Aligned_cols=43 Identities=23% Similarity=0.141 Sum_probs=37.5
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR 132 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~ 132 (218)
...+++.++|+ ++|++++|||+++...+..++++ +|+..+|-.
T Consensus 21 ~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~-l~l~~~~i~ 66 (273)
T PRK00192 21 YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKE-LGLEDPFIV 66 (273)
T ss_pred cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCEEE
Confidence 46778888888 89999999999999999999999 999876543
No 177
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.21 E-value=1.1 Score=39.17 Aligned_cols=82 Identities=15% Similarity=0.117 Sum_probs=53.2
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCCCceEEcC--C-CC-----ChHHHHHHHHhcC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---RFADALLRELAGVTIPPDRIYGL--G-TG-----PKVEVLKQLQKKP 152 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~Fd~I~g~--d-~k-----pkPe~l~~l~~~~ 152 (218)
..++.||+.++++ ++|++++++||+.+ +.+..-|++ .|+..+=..+.-. + ++ -|.+.-+++.. .
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~k-aGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~-e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKK-AGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQ-E 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHH-cCCCCcceeeecCCCCCccchhHHHHHHHHHHHHH-c
Confidence 4678999999999 89999999999986 346667777 7887552333322 1 11 12222233332 2
Q ss_pred CCCCCcEEEEcCChhhHHHh
Q 027821 153 ELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 153 ~~~~~e~l~IGDs~~Di~aA 172 (218)
+..-. ..|||..+|+...
T Consensus 221 GYrIv--~~iGDq~sDl~G~ 238 (275)
T TIGR01680 221 GYNIV--GIIGDQWNDLKGE 238 (275)
T ss_pred CceEE--EEECCCHHhccCC
Confidence 22222 6899999999655
No 178
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=92.16 E-value=0.15 Score=43.83 Aligned_cols=46 Identities=26% Similarity=0.310 Sum_probs=36.9
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChH---HHHHHHHHhcCCCCCCceEEcC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSR---FADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~---~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
++||+.++|+ ++|++++++||++.. .....|+. +|+.--.+.|+++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-LGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-cCCCCCHHHeEcH
Confidence 8999999999 789999999986665 46677787 8987555666654
No 179
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=91.76 E-value=0.82 Score=47.15 Aligned_cols=39 Identities=28% Similarity=0.366 Sum_probs=36.4
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.++-|++.++++ ++|+++.++|+-+...+..+-++ +|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~-~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARE-CGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH-cCCC
Confidence 478899999999 89999999999999999999999 9994
No 180
>PLN03190 aminophospholipid translocase; Provisional
Probab=91.15 E-value=0.84 Score=47.61 Aligned_cols=38 Identities=16% Similarity=0.397 Sum_probs=30.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGV 126 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl 126 (218)
.++-+|+.++++ ++|+++.++|+-..+.+..+=.. +||
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s-~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS-SKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-hCC
Confidence 478999999999 88999999999888777766544 444
No 181
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=90.79 E-value=2.1 Score=36.94 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=51.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC------------CCC------hHH-HH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG------------TGP------KVE-VL 145 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d------------~kp------kPe-~l 145 (218)
..+-+|+.++++ ++++++.|.|..-.+.++.+|++ .|....=-.|++.- ..| |-+ .+
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q-~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQ-AGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHH-TT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHH-cCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 568899999999 89999999999999999999999 75432111244432 111 222 12
Q ss_pred --HHHHhcCCCCCCcEEEEcCChhhHHHh
Q 027821 146 --KQLQKKPELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 146 --~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
...-...+ ...+++..|||..|+.+|
T Consensus 168 ~~~~~~~~~~-~R~NvlLlGDslgD~~Ma 195 (246)
T PF05822_consen 168 EDSPYFKQLK-KRTNVLLLGDSLGDLHMA 195 (246)
T ss_dssp TTHHHHHCTT-T--EEEEEESSSGGGGTT
T ss_pred cCchHHHHhc-cCCcEEEecCccCChHhh
Confidence 11223444 567899999999999999
No 182
>PLN02382 probable sucrose-phosphatase
Probab=90.58 E-value=0.98 Score=41.73 Aligned_cols=51 Identities=12% Similarity=-0.107 Sum_probs=41.2
Q ss_pred ChHHHHHHHHhcC---CCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHH
Q 027821 140 PKVEVLKQLQKKP---ELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKER 196 (218)
Q Consensus 140 pkPe~l~~l~~~~---~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l 196 (218)
.|-..++.+++.+ +++..+++.+||+.||+++= +. +|+..|++ |-.+++..
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl-~~---ag~~gvam--~NA~~elk 228 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELF-SV---PDVYGVMV--SNAQEELL 228 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHH-hc---CCCCEEEE--cCCcHHHH
Confidence 7888899998888 78889999999999999999 88 88767777 43444333
No 183
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=90.49 E-value=1.5 Score=37.64 Aligned_cols=38 Identities=13% Similarity=0.273 Sum_probs=33.2
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCC
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV 126 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl 126 (218)
.++-||+.++++ +.-..=+|+|++-+.+++.+-++ .|+
T Consensus 82 a~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~-ig~ 121 (315)
T COG4030 82 AKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASM-IGV 121 (315)
T ss_pred cccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHh-cCC
Confidence 578999999999 77778899999999999999888 887
No 184
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=90.26 E-value=0.68 Score=39.59 Aligned_cols=70 Identities=20% Similarity=0.188 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 115 FADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 115 ~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.++..|+. .|+. .+.+++.. .-.|-..++.++.+.+++..++++.|||-+|+.+= . .+...|.|
T Consensus 135 ~i~~~l~~-~~l~--~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~----~~~~~vvV 206 (247)
T PF05116_consen 135 EIRARLRQ-RGLR--VNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-E----GGDHGVVV 206 (247)
T ss_dssp HHHHHHHC-CTCE--EEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-C----CSSEEEE-
T ss_pred HHHHHHHH-cCCC--eeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-c----CcCCEEEE
Confidence 35555555 5654 34445443 22678899999999998889999999999999988 6 46677766
Q ss_pred ecCCCCHH
Q 027821 187 DWGYNTQK 194 (218)
Q Consensus 187 ~~G~~~~~ 194 (218)
|..+++
T Consensus 207 --~Na~~e 212 (247)
T PF05116_consen 207 --GNAQPE 212 (247)
T ss_dssp --TTS-HH
T ss_pred --cCCCHH
Confidence 445555
No 185
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=90.22 E-value=1.1 Score=42.61 Aligned_cols=101 Identities=19% Similarity=0.160 Sum_probs=69.4
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHH----HHHHHHhcCCCCCCcEEE
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVE----VLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe----~l~~l~~~~~~~~~e~l~ 161 (218)
...||+.|-+. +.|++...+|+.++-.+..+-++ .|+++|.. ..+|+ .+++-..+-+ =+-|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~E-AGVDdfiA-------eatPEdK~~~I~~eQ~~gr----lVAM 514 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE-AGVDDFIA-------EATPEDKLALIRQEQAEGR----LVAM 514 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHH-hCchhhhh-------cCChHHHHHHHHHHHhcCc----EEEE
Confidence 46799999988 89999999999999999999999 99987654 24443 4444443322 2359
Q ss_pred EcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh-----ccCCCCeEEc
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE-----AASIPRIQLL 208 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~-----a~~~p~~~~~ 208 (218)
.||..||.-|- .. |.+- ++.+.|. ....+. .++||+-+++
T Consensus 515 tGDGTNDAPAL-Aq---AdVg-~AMNsGT--qAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 515 TGDGTNDAPAL-AQ---ADVG-VAMNSGT--QAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred cCCCCCcchhh-hh---cchh-hhhcccc--HHHHHhhcccccCCCccceeh
Confidence 99999999887 44 5542 2335554 333332 3556666544
No 186
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=90.06 E-value=1.3 Score=36.89 Aligned_cols=91 Identities=13% Similarity=0.121 Sum_probs=59.7
Q ss_pred CCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCC--Cc--eEEcCC---------CCCh-HHHHHHHHhcC
Q 027821 89 RFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIP--PD--RIYGLG---------TGPK-VEVLKQLQKKP 152 (218)
Q Consensus 89 ~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~--Fd--~I~g~d---------~kpk-Pe~l~~l~~~~ 152 (218)
..-||+.++|+ ...+.++|-|+.....++.+++. +|+... +. .+...+ .++. -..+..+-.++
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~-l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l 123 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE-LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALL 123 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH-hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhc
Confidence 35699999999 78999999999999999999999 886432 11 122111 1111 11133332232
Q ss_pred C--CCCCcEEEEcCChhhHHHhhccCccCCceEE
Q 027821 153 E--LQGMTLHFVEDRLATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 153 ~--~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i 184 (218)
+ .+..++++|+|++.-...- =. +|+.+-
T Consensus 124 ~~~~~~~ntiiVDd~p~~~~~~-P~---N~i~I~ 153 (195)
T TIGR02245 124 PEFYSMKNTIMFDDLRRNFLMN-PQ---NGLKIR 153 (195)
T ss_pred ccCCCcccEEEEeCCHHHHhcC-CC---CccccC
Confidence 2 1557899999999987765 44 566554
No 187
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=89.79 E-value=0.64 Score=40.38 Aligned_cols=80 Identities=23% Similarity=0.275 Sum_probs=53.5
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A 179 (218)
..-+++++||.++...-+.+++.+..+.-.+|-.+....-+|..+++.+. ++ +|++|....++.| . .
T Consensus 184 ~~piRtalVTAR~apah~RvI~TLr~Wgv~vDEafFLgG~~K~~vL~~~~--ph------IFFDDQ~~H~~~a-~----~ 250 (264)
T PF06189_consen 184 NSPIRTALVTARSAPAHERVIRTLRSWGVRVDEAFFLGGLPKGPVLKAFR--PH------IFFDDQDGHLESA-S----K 250 (264)
T ss_pred CCceEEEEEEcCCCchhHHHHHHHHHcCCcHhHHHHhCCCchhHHHHhhC--CC------EeecCchhhhhHh-h----c
Confidence 45689999997665443444443233333456444333337777766553 22 7999999999999 7 5
Q ss_pred CceEEEEecCCCC
Q 027821 180 GWNLYLGDWGYNT 192 (218)
Q Consensus 180 Gv~~i~V~~G~~~ 192 (218)
++++.-|.||..+
T Consensus 251 ~vps~hVP~gv~n 263 (264)
T PF06189_consen 251 VVPSGHVPYGVAN 263 (264)
T ss_pred CCCEEeccCCcCC
Confidence 8999999999654
No 188
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=89.67 E-value=1.7 Score=43.61 Aligned_cols=99 Identities=19% Similarity=0.258 Sum_probs=69.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce----EEcC-C----------------------
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDR----IYGL-G---------------------- 137 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~----I~g~-d---------------------- 137 (218)
.+|-|+|.+.++ +.|+++-++|+-..+.+.++-++ .|+-..-+. .+++ +
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~-iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIARE-IGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-hCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 478899999999 99999999999999999999999 998654442 2222 1
Q ss_pred -CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 138 -TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 138 -~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
...|-++++.+.+.-++ +-|-||..||.-|= |. |.+ |+.-|-.-.+.-++
T Consensus 662 ~P~HK~kIVeaLq~~gei----vAMTGDGVNDApAL-K~---AdI---GIAMG~~GTdVaKe 712 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEV----VAMTGDGVNDAPAL-KK---ADI---GIAMGISGTDVAKE 712 (972)
T ss_pred CchhHHHHHHHHHhcCCE----EEecCCCccchhhh-hh---ccc---ceeecCCccHhhHh
Confidence 11233455555554433 35999999999998 88 765 55566333344343
No 189
>PRK10444 UMP phosphatase; Provisional
Probab=88.12 E-value=0.58 Score=40.11 Aligned_cols=48 Identities=25% Similarity=0.355 Sum_probs=36.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHH---HHHhcCCCCCCceEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADAL---LRELAGVTIPPDRIYGL 136 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~i---L~~~~gl~~~Fd~I~g~ 136 (218)
..++||+.++|+ ++|.+++++||+.......+ |+. +|+.--.+.|+++
T Consensus 16 ~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~-~G~~~~~~~i~ts 69 (248)
T PRK10444 16 NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT-AGVDVPDSVFYTS 69 (248)
T ss_pred CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH-cCCCCCHhhEecH
Confidence 378999999998 88999999999887554444 455 6776555666655
No 190
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=87.54 E-value=1.1 Score=37.72 Aligned_cols=40 Identities=23% Similarity=0.104 Sum_probs=34.7
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
...++..++|+ ++|++++++|+++...+..++++ +|+..+
T Consensus 15 ~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~-lg~~~~ 57 (225)
T TIGR02461 15 YEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREE-LGVEPP 57 (225)
T ss_pred CCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-cCCCCc
Confidence 45677888888 78999999999999999999999 998653
No 191
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=87.47 E-value=3.1 Score=36.06 Aligned_cols=81 Identities=11% Similarity=0.046 Sum_probs=60.7
Q ss_pred CcEEEEc-CCChHHHHHHHHHhcCCCCCC--ceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC
Q 027821 103 SRIYIVT-TKQSRFADALLRELAGVTIPP--DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 103 ~~laIvT-nk~~~~~~~iL~~~~gl~~~F--d~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A 179 (218)
.--++|| +.--..+-.+|= +||+.+| +-||++..-.|...++++..+++.+...-++|||..---+|| +. -
T Consensus 176 ~vNvLVTs~qLVPaLaKcLL--y~L~~~f~ieNIYSa~kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aA-k~---l 249 (274)
T TIGR01658 176 CINVLVTSGQLIPSLAKCLL--FRLDTIFRIENVYSSIKVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAA-QA---M 249 (274)
T ss_pred eeEEEEEcCccHHHHHHHHH--hccCCccccccccchhhcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHH-Hh---c
Confidence 3344555 444455555554 5887776 457877655889999999999985467889999999999999 98 9
Q ss_pred CceEEEEecC
Q 027821 180 GWNLYLGDWG 189 (218)
Q Consensus 180 Gv~~i~V~~G 189 (218)
+++++-+...
T Consensus 250 ~wPFw~I~~h 259 (274)
T TIGR01658 250 NWPFVKIDLH 259 (274)
T ss_pred CCCeEEeecC
Confidence 9999988643
No 192
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=87.20 E-value=1.3 Score=40.67 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=60.2
Q ss_pred HHHHHhCCCcEEEEcCCChHHHHHHHHHhcC--CCCCCceEEcCCCC-------------------ChH-----------
Q 027821 95 PDALKFASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLGTG-------------------PKV----------- 142 (218)
Q Consensus 95 ~e~L~~~g~~laIvTnk~~~~~~~iL~~~~g--l~~~Fd~I~g~d~k-------------------pkP----------- 142 (218)
...+++.|.++.++||+.-.++..++++++| +..|||.|+....| +++
T Consensus 207 l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~~ 286 (424)
T KOG2469|consen 207 LSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQGG 286 (424)
T ss_pred hHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhcc
Confidence 3333389999999999999999999988565 56889987543211 111
Q ss_pred ----HHHHHHHhcCCCCCCcEEEEcCChhh-HHHhhccCccCCceEEEEe
Q 027821 143 ----EVLKQLQKKPELQGMTLHFVEDRLAT-LKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 143 ----e~l~~l~~~~~~~~~e~l~IGDs~~D-i~aA~k~~~~AGv~~i~V~ 187 (218)
.....++...+....+++||||...+ |----+. -|+.++.|-
T Consensus 287 ~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~---~~wrt~lv~ 333 (424)
T KOG2469|consen 287 VYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKR---RGWRTVLVA 333 (424)
T ss_pred cCCcchHHHHHHHhcccccceeecccceeeeEEeccee---cceEEEEEe
Confidence 22233444444344677999998764 4333266 899998884
No 193
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=87.12 E-value=0.52 Score=40.09 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=35.0
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceE
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNL 183 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~ 183 (218)
.|...++.+.+.++++..+++.|||+.+|+.+= +. +|..+
T Consensus 189 ~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml-~~---ag~gv 228 (264)
T COG0561 189 SKGYALQRLAKLLGIKLEEVIAFGDSTNDIEML-EV---AGLGV 228 (264)
T ss_pred chHHHHHHHHHHhCCCHHHeEEeCCccccHHHH-Hh---cCeee
Confidence 777888999999998888999999999999999 87 88533
No 194
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=87.09 E-value=8 Score=36.74 Aligned_cols=109 Identities=12% Similarity=0.087 Sum_probs=66.5
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 58 WSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
.|.+.++++...+++...+... .+.|.+.+.++++|.. +|||.+++..++.+.++++|++ .|+|.+
T Consensus 88 ~G~~~~el~~~~r~~l~~f~~~---------~l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTe 153 (497)
T PLN02177 88 AGLKIRDIELVSRSVLPKFYAE---------DVHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTE 153 (497)
T ss_pred cCCCHHHHHHHHHHHHHHHHHH---------hcCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEecc
Confidence 3777777766655555555322 2566677777766644 9999999999999997636765 333332
Q ss_pred -------------CCCh----HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEE
Q 027821 138 -------------TGPK----VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 138 -------------~kpk----Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V 186 (218)
.+++ .+-..++.+..+.+ ...+..|||.+|...- .. ++ ..+.|
T Consensus 154 Lev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~-~~~~aYgDS~sD~plL-~~---a~-e~y~V 213 (497)
T PLN02177 154 LEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDA-LPDLGLGDRETDHDFM-SI---CK-EGYMV 213 (497)
T ss_pred cEECcCCEEeeeecCCCCCccHHHHHHHHHHhCCC-CceEEEECCccHHHHH-Hh---CC-ccEEe
Confidence 1121 12233343333322 2238999999999988 65 55 23445
No 195
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=86.21 E-value=1.6 Score=38.46 Aligned_cols=47 Identities=17% Similarity=0.082 Sum_probs=42.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
+-|.|.+.|. +.|.-+++=|...++.+...|++ ++|..+||.|++..
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~-~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE-LKLEGYFDIIICGG 192 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH-hCCccccEEEEeCC
Confidence 4578888888 88999999999999999999999 99999999998765
No 196
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=85.85 E-value=1.4 Score=36.39 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=30.4
Q ss_pred ChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 93 GIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 93 Gv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
-..++|+ ++|+++++|||++...+..++++ +|+.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~-l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKA-LGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCC
Confidence 3567777 89999999999999999999999 9986
No 197
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=82.86 E-value=3.1 Score=35.27 Aligned_cols=44 Identities=16% Similarity=0.212 Sum_probs=34.8
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEE
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIY 134 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~ 134 (218)
+-+...++|+ ++|++++|||+++...+..++++ +++....+.++
T Consensus 21 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~~~~~I 67 (270)
T PRK10513 21 ISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKE-LHMEQPGDYCI 67 (270)
T ss_pred cCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHH-hCCCCCCCeEE
Confidence 3455667777 89999999999999999999999 99875433333
No 198
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=81.72 E-value=2.9 Score=40.77 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=55.9
Q ss_pred cCCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCC-CCC-ceEEcCCCCChHHHHHHHHhcCCCCCCcEEEE
Q 027821 87 ANRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVT-IPP-DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFV 162 (218)
Q Consensus 87 ~~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~-~~F-d~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~I 162 (218)
.+++-|++.++|+ ..=+.|.|+|...+.++..+++- ++-. .|| |.|++.+..|+-..+......+..+. -++.|
T Consensus 199 ~vKlRP~~~efL~~~sklfemhVyTmg~R~YA~~i~~l-iDP~~~lF~dRIisrde~~~~kt~dL~~~~p~g~s-mvvII 276 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKLFEMHVYTMGTRDYALEIAKL-IDPEGKYFGDRIISRDESPFFKTLDLVLLFPCGDS-MVVII 276 (635)
T ss_pred EEEeCccHHHHHHHHHhhceeEEEeccchHHHHHHHHH-hCCCCccccceEEEecCCCcccccccccCCCCCCc-cEEEE
Confidence 3578899999999 88899999999999999999997 7664 567 57899874333333322222222122 24555
Q ss_pred cCChhhHHHh
Q 027821 163 EDRLATLKNV 172 (218)
Q Consensus 163 GDs~~Di~aA 172 (218)
+|+..=-..+
T Consensus 277 DDr~dVW~~~ 286 (635)
T KOG0323|consen 277 DDRSDVWPDH 286 (635)
T ss_pred eCccccccCC
Confidence 5554433444
No 199
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=79.94 E-value=2.8 Score=37.21 Aligned_cols=40 Identities=18% Similarity=0.189 Sum_probs=34.4
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
..++-+.++|+ ++|++++++|+|....+..+.+. +++..+
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~-Lgl~~p 60 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQ-LRLEHP 60 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-hCCCCe
Confidence 35566777777 89999999999999999999999 998754
No 200
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=79.71 E-value=3.7 Score=34.77 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=32.3
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI 128 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~ 128 (218)
..+...++|+ ++|++++++|+++...+..++++ +|+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~-~~~~~ 57 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKE-LGLED 57 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-cCCCC
Confidence 3445677777 88999999999999999999999 99863
No 201
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=79.58 E-value=4 Score=34.41 Aligned_cols=49 Identities=27% Similarity=0.455 Sum_probs=34.6
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCCh---H-HHHHHHHHhcCCCCCCceEEcC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQS---R-FADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~---~-~~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
...++||+.+.|+ ++|+++.++||... . .++.+.++ +|+.--++-|+++
T Consensus 12 ~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~-~g~~~~~~~iits 67 (236)
T TIGR01460 12 GHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSL-LGVDVSPDQIITS 67 (236)
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHh-cCCCCCHHHeeeH
Confidence 3468999999998 78999999997653 3 33344444 6776556666554
No 202
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=79.35 E-value=7.6 Score=38.40 Aligned_cols=64 Identities=11% Similarity=-0.040 Sum_probs=44.7
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHHhhc
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSRKL 217 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~~~ 217 (218)
.|-..++.+++ +.++..++++||+.+|..+- +. .+-..++|.=|-. ...++ +.+++++|+..-|
T Consensus 657 nKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf-~~---~~~~~~~v~vG~~------~s~A~--~~l~~~~eV~~~L 720 (726)
T PRK14501 657 NKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMF-RA---LPETAITVKVGPG------ESRAR--YRLPSQREVRELL 720 (726)
T ss_pred CHHHHHHHHHh--cCCCCEEEEECCCCChHHHH-Hh---cccCceEEEECCC------CCcce--EeCCCHHHHHHHH
Confidence 67778888887 45678899999999999999 76 5333344444532 12345 8888888866544
No 203
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=79.09 E-value=6 Score=37.48 Aligned_cols=69 Identities=23% Similarity=0.302 Sum_probs=57.7
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHH
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKN 171 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~a 171 (218)
++|+-++|||-+...-++.+.++ + .+.|..-+ --||.+-++++.+++++.....+||+|++...+-
T Consensus 269 kqGVlLav~SKN~~~da~evF~k-h-----p~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~ 342 (574)
T COG3882 269 KQGVLLAVCSKNTEKDAKEVFRK-H-----PDMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAEREL 342 (574)
T ss_pred hccEEEEEecCCchhhHHHHHhh-C-----CCeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHH
Confidence 89999999998888888888877 3 34444432 3499999999999998888888999999999999
Q ss_pred hhcc
Q 027821 172 VIKE 175 (218)
Q Consensus 172 A~k~ 175 (218)
- |+
T Consensus 343 v-k~ 345 (574)
T COG3882 343 V-KR 345 (574)
T ss_pred H-Hh
Confidence 9 76
No 204
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=78.26 E-value=3.6 Score=33.89 Aligned_cols=39 Identities=18% Similarity=0.164 Sum_probs=33.3
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
+-|...++|+ ++|++++|||+++...+..+++. +|+..+
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKL-IGTSGP 62 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCc
Confidence 4456777777 79999999999999999999999 998754
No 205
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=78.14 E-value=3.3 Score=33.98 Aligned_cols=40 Identities=23% Similarity=0.208 Sum_probs=34.3
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
.+-|...++|+ ++|++++++|+++...+..+++. +++..+
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~-l~~~~~ 60 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVL-IGTSGP 60 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHH-hCCCCc
Confidence 45677888888 89999999999999999999998 887644
No 206
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=78.03 E-value=6.9 Score=32.07 Aligned_cols=92 Identities=18% Similarity=0.186 Sum_probs=55.7
Q ss_pred CCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCC-CCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCCh
Q 027821 90 FYPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGV-TIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRL 166 (218)
Q Consensus 90 l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl-~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~ 166 (218)
+=.+|...|. ++.-+++-+|+....+.+..=.- +.. +..+|.+.-.....|-+.++... +. ++++|+.
T Consensus 73 ~~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~-l~~q~ih~~~l~i~g~h~KV~~vrth~------id--lf~ed~~ 143 (194)
T COG5663 73 LAQLVKQVLPSLKEEHRLIYITARKADLTRITYAW-LFIQNIHYDHLEIVGLHHKVEAVRTHN------ID--LFFEDSH 143 (194)
T ss_pred HHHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHH-HHHhccchhhhhhhcccccchhhHhhc------cC--ccccccC
Confidence 4457777777 77788999999887765543332 322 23455542221113333333222 23 6899987
Q ss_pred hhHHHhhccCccCCceEEEEecCCCCH
Q 027821 167 ATLKNVIKEPELDGWNLYLGDWGYNTQ 193 (218)
Q Consensus 167 ~Di~aA~k~~~~AGv~~i~V~~G~~~~ 193 (218)
...-++.++ +|++++.+..-|+..
T Consensus 144 ~na~~iAk~---~~~~vilins~ynRk 167 (194)
T COG5663 144 DNAGQIAKN---AGIPVILINSPYNRK 167 (194)
T ss_pred chHHHHHHh---cCCcEEEecCccccc
Confidence 665444499 999999998776543
No 207
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.76 E-value=11 Score=32.93 Aligned_cols=81 Identities=10% Similarity=0.133 Sum_probs=52.0
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC---C------CChHHHH----------HH
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG---T------GPKVEVL----------KQ 147 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d---~------kpkPe~l----------~~ 147 (218)
+-.|..++.+ ++++++.|.|..-...++.++++ ......+-.+++.- . +-+..++ +.
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q-~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~ 217 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQ-KLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQN 217 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHH-HhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHh
Confidence 4456666655 89999999999999999999988 44333344444431 0 1111111 11
Q ss_pred ---HHhcCCCCCCcEEEEcCChhhHHHh
Q 027821 148 ---LQKKPELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 148 ---l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
-..... ....+++-|||..|+.+|
T Consensus 218 ~s~yf~~~~-~~~nVillGdsigdl~ma 244 (298)
T KOG3128|consen 218 ESEYFHQLA-GRVNVILLGDSIGDLHMA 244 (298)
T ss_pred hhHHHhhcc-CCceEEEeccccccchhh
Confidence 111122 456789999999999999
No 208
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=76.35 E-value=4.8 Score=33.91 Aligned_cols=38 Identities=18% Similarity=0.329 Sum_probs=32.9
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI 128 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~ 128 (218)
+-+...++|+ ++|++++|+|+++...+..++++ +++..
T Consensus 17 i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~-~~~~~ 57 (256)
T TIGR00099 17 ISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKE-LGLDT 57 (256)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 4567778887 88999999999999999999999 88864
No 209
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=75.65 E-value=6.5 Score=32.78 Aligned_cols=36 Identities=14% Similarity=0.066 Sum_probs=30.7
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
++|++++|+|+++...+..+++. +++. .++.++|..
T Consensus 28 ~~gi~~viaTGR~~~~v~~~~~~-l~l~-~~~~~I~~n 63 (236)
T TIGR02471 28 GDAVGFGIATGRSVESAKSRYAK-LNLP-SPDVLIARV 63 (236)
T ss_pred CCCceEEEEeCCCHHHHHHHHHh-CCCC-CCCEEEECC
Confidence 88999999999999999999999 9987 455666543
No 210
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=75.44 E-value=5.4 Score=33.71 Aligned_cols=40 Identities=20% Similarity=0.285 Sum_probs=33.9
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
.+-|...++|+ ++|+++++||+++...+..+++. +++..+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 62 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQA-LALDTP 62 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCC
Confidence 35566778887 89999999999999999999999 998753
No 211
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=74.95 E-value=4.7 Score=34.39 Aligned_cols=39 Identities=8% Similarity=-0.043 Sum_probs=33.5
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
+-+...++|+ ++|++++++|+++...+..+++. +|+..+
T Consensus 20 i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (272)
T PRK15126 20 LGEKTLSTLARLRERDITLTFATGRHVLEMQHILGA-LSLDAY 61 (272)
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH-cCCCCc
Confidence 4556677777 89999999999999999999999 998754
No 212
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=74.57 E-value=36 Score=35.73 Aligned_cols=39 Identities=15% Similarity=0.330 Sum_probs=33.1
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.++-+||+|.++ ++|+|+=|.|+-..+.+..+--. +++-
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~s-C~Ll 691 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYS-CRLL 691 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHh-hcCC
Confidence 588999999999 99999999999888888777666 6553
No 213
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=74.29 E-value=46 Score=28.76 Aligned_cols=95 Identities=17% Similarity=0.145 Sum_probs=67.5
Q ss_pred CCCCCChHHHHH------hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc--eEEcCCCC-ChHHHHHHHHhcCCCCCCc
Q 027821 88 NRFYPGIPDALK------FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTG-PKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 88 ~~l~pGv~e~L~------~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd--~I~g~d~k-pkPe~l~~l~~~~~~~~~e 158 (218)
-.++|.+.++++ +.|+.+.-+++.+...++.+.+ +|-+-..- .-+|+..+ .+|+.++.+.+..++ +
T Consensus 103 ~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~--~G~~~vmPlg~pIGsg~Gi~~~~~I~~I~e~~~v-p-- 177 (248)
T cd04728 103 KTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLED--AGCAAVMPLGSPIGSGQGLLNPYNLRIIIERADV-P-- 177 (248)
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhCCC-c--
Confidence 468999999999 5699998566666677777666 57653211 22344333 479999888776542 3
Q ss_pred EEEEc---CChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 159 LHFVE---DRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 159 ~l~IG---Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
+++| .++.|+..| -+ .|...+.|.++...
T Consensus 178 -VI~egGI~tpeda~~A-me---lGAdgVlV~SAIt~ 209 (248)
T cd04728 178 -VIVDAGIGTPSDAAQA-ME---LGADAVLLNTAIAK 209 (248)
T ss_pred -EEEeCCCCCHHHHHHH-HH---cCCCEEEEChHhcC
Confidence 4555 468999999 77 99999999998754
No 214
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=74.16 E-value=3.1 Score=33.99 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=33.0
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
+-|...++|+ ++|++++++|+++...+..+++. +++.
T Consensus 16 i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~~~ 55 (254)
T PF08282_consen 16 ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKE-LGID 55 (254)
T ss_dssp SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHH-TTHC
T ss_pred eCHHHHHHHHhhcccceEEEEEccCccccccccccc-ccch
Confidence 5567778887 79999999999999999999999 9987
No 215
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=73.51 E-value=14 Score=33.29 Aligned_cols=81 Identities=12% Similarity=0.199 Sum_probs=50.5
Q ss_pred cCCCCCChHHHHH---hCC-CcEEEEcCCChHHH---HHHHHHhcCC----------CCCCceEEcCCCCChHHHHHHHH
Q 027821 87 ANRFYPGIPDALK---FAS-SRIYIVTTKQSRFA---DALLRELAGV----------TIPPDRIYGLGTGPKVEVLKQLQ 149 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g-~~laIvTnk~~~~~---~~iL~~~~gl----------~~~Fd~I~g~d~kpkPe~l~~l~ 149 (218)
...++|||....+ +.| .++.-|||++...- ...+.. .++ ...||.+.++....|-..++.+.
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~-~~~P~GPl~L~~~g~~~~~i~~sga~rK~~~l~nil 272 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITN-RNFPYGPLLLRRWGGVLDNIIESGAARKGQSLRNIL 272 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhc-CCCCCCchhHhhcCCcccccccchhhhcccHHHHHH
Confidence 4579999999999 555 89999999998643 233322 221 23355555544335556667566
Q ss_pred hcCCCCCCcEEEEcCC-hhhHH
Q 027821 150 KKPELQGMTLHFVEDR-LATLK 170 (218)
Q Consensus 150 ~~~~~~~~e~l~IGDs-~~Di~ 170 (218)
..+. ....+.|||+ .+|.+
T Consensus 273 ~~~p--~~kfvLVGDsGE~Dpe 292 (373)
T COG4850 273 RRYP--DRKFVLVGDSGEHDPE 292 (373)
T ss_pred HhCC--CceEEEecCCCCcCHH
Confidence 6653 2355889987 45543
No 216
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=73.47 E-value=17 Score=33.44 Aligned_cols=81 Identities=15% Similarity=0.095 Sum_probs=58.0
Q ss_pred hCCCcEEEEcCCCh-HHHHHHHHHhcCCCCCC--ceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccC
Q 027821 100 FASSRIYIVTTKQS-RFADALLRELAGVTIPP--DRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEP 176 (218)
Q Consensus 100 ~~g~~laIvTnk~~-~~~~~iL~~~~gl~~~F--d~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~ 176 (218)
+.+.--++|||..- -.+..+|- +||+..| +-|++...-.|-..++++..+++ ....-+.|||..-.-.+| |+
T Consensus 368 r~ncvnVlvTttqLipalaKvLL--~gLg~~fpiENIYSa~kiGKescFerI~~RFg-~K~~yvvIgdG~eee~aA-K~- 442 (468)
T KOG3107|consen 368 RKNCVNVLVTTTQLIPALAKVLL--YGLGSSFPIENIYSATKIGKESCFERIQSRFG-RKVVYVVIGDGVEEEQAA-KA- 442 (468)
T ss_pred ccceeEEEEeccchhHHHHHHHH--HhcCCcccchhhhhhhhccHHHHHHHHHHHhC-CceEEEEecCcHHHHHHH-Hh-
Confidence 44555566666543 33333333 4666554 56787764478888999999998 466778999999999999 99
Q ss_pred ccCCceEEEEe
Q 027821 177 ELDGWNLYLGD 187 (218)
Q Consensus 177 ~~AGv~~i~V~ 187 (218)
..|+++-+.
T Consensus 443 --ln~PfwrI~ 451 (468)
T KOG3107|consen 443 --LNMPFWRIS 451 (468)
T ss_pred --hCCceEeec
Confidence 999998775
No 217
>PRK10976 putative hydrolase; Provisional
Probab=71.90 E-value=6 Score=33.51 Aligned_cols=39 Identities=10% Similarity=0.055 Sum_probs=32.8
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
+-+...++|+ ++|++++|||+++...+..+++. +|+..+
T Consensus 20 is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~-l~~~~~ 61 (266)
T PRK10976 20 LSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDN-LEIKSY 61 (266)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHh-cCCCCe
Confidence 4455677777 89999999999999999999999 998754
No 218
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=71.41 E-value=20 Score=31.02 Aligned_cols=80 Identities=8% Similarity=0.084 Sum_probs=51.7
Q ss_pred hCCCcEEEEcCCCh---HHHHHHHHHhc--CCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChhh--HHH
Q 027821 100 FASSRIYIVTTKQS---RFADALLRELA--GVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLAT--LKN 171 (218)
Q Consensus 100 ~~g~~laIvTnk~~---~~~~~iL~~~~--gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~D--i~a 171 (218)
+.++..-++|+... +.++..... . .++.-|-.++|.+ .-|-|.--+.++...+++| ++|||.+.- -++
T Consensus 29 RedI~vrv~gsGaKm~pe~~~~~~~~-~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~~iP~---IvI~D~p~~K~~d~ 104 (277)
T PRK00994 29 REDIDVRVVGSGAKMGPEEVEEVVKK-MLEEWKPDFVIVISPNPAAPGPKKAREILKAAGIPC---IVIGDAPGKKVKDA 104 (277)
T ss_pred ccCceEEEeccCCCCCHHHHHHHHHH-HHHhhCCCEEEEECCCCCCCCchHHHHHHHhcCCCE---EEEcCCCccchHHH
Confidence 56899999987543 445544544 3 4444355456665 3477888888888887665 899998752 233
Q ss_pred hhccCccCCceEEEEe
Q 027821 172 VIKEPELDGWNLYLGD 187 (218)
Q Consensus 172 A~k~~~~AGv~~i~V~ 187 (218)
- ++ .|+-.|-+.
T Consensus 105 l-~~---~g~GYIivk 116 (277)
T PRK00994 105 M-EE---QGLGYIIVK 116 (277)
T ss_pred H-Hh---cCCcEEEEe
Confidence 3 55 777666653
No 219
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=71.22 E-value=6.8 Score=32.04 Aligned_cols=39 Identities=23% Similarity=0.318 Sum_probs=32.2
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP 129 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~ 129 (218)
+-+...++|+ ++|+++++||+++...+..+++. +|+..+
T Consensus 16 i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~-l~~~~~ 57 (225)
T TIGR01482 16 INESALEAIRKAESVGIPVVLVTGNSVQFARALAKL-IGTPDP 57 (225)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH-hCCCCe
Confidence 4456677777 79999999999999999999998 886543
No 220
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=69.65 E-value=7.4 Score=32.94 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=34.1
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI 128 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~ 128 (218)
.-+-..++|+ ++|++++++|+++...+..+++. +++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~-l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEE-LGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHH-cCCCc
Confidence 5567777887 89999999999999999999999 99986
No 221
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=69.44 E-value=52 Score=26.72 Aligned_cols=80 Identities=16% Similarity=0.095 Sum_probs=46.9
Q ss_pred CcEEEEcCCCh--------HHHHHHHHHhcCCCCCCceEEcCCCC--ChHHHHHHHHhcCCC-CCCcEEEEcCCh-hhHH
Q 027821 103 SRIYIVTTKQS--------RFADALLRELAGVTIPPDRIYGLGTG--PKVEVLKQLQKKPEL-QGMTLHFVEDRL-ATLK 170 (218)
Q Consensus 103 ~~laIvTnk~~--------~~~~~iL~~~~gl~~~Fd~I~g~d~k--pkPe~l~~l~~~~~~-~~~e~l~IGDs~-~Di~ 170 (218)
..++|+||+.. +.+..+-.+ .||- ++--+..| ...|.+.+.-...++ .+.|++||||+. .||.
T Consensus 80 k~i~v~SNsaG~~~~D~d~s~Ak~le~k-~gIp----VlRHs~kKP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~ 154 (190)
T KOG2961|consen 80 KDIAVFSNSAGLTEYDHDDSKAKALEAK-IGIP----VLRHSVKKPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIV 154 (190)
T ss_pred ccEEEEecCcCccccCCchHHHHHHHHh-hCCc----eEeecccCCCccHHHHHHHhCCcccCChhHeEEEccchhhhHh
Confidence 56888888654 233333344 5542 12112222 446777666554433 578999999997 6999
Q ss_pred HhhccCccCCceEEEEecCCC
Q 027821 171 NVIKEPELDGWNLYLGDWGYN 191 (218)
Q Consensus 171 aA~k~~~~AGv~~i~V~~G~~ 191 (218)
.| .. .|--.++..-|-+
T Consensus 155 ~a-N~---mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 155 YA-NR---MGSLGVWTEPGVR 171 (190)
T ss_pred hh-hh---ccceeEEeccccc
Confidence 99 55 5554444455543
No 222
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=68.96 E-value=7.4 Score=34.54 Aligned_cols=41 Identities=22% Similarity=0.466 Sum_probs=32.1
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHh--cCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQSRFADALLREL--AGVT 127 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~--~gl~ 127 (218)
...+.||+.|+|+ +.|-++.+|||++..+-+..+++. +|+.
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 3579999999999 899999999998877666665530 4655
No 223
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=68.31 E-value=9.3 Score=32.21 Aligned_cols=44 Identities=14% Similarity=0.053 Sum_probs=34.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEc
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYG 135 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g 135 (218)
.-|...++++ ++|+.+++||+++...+..+++. +++.. ++.+++
T Consensus 22 ~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~-~~~~~-p~~~I~ 68 (249)
T TIGR01485 22 ALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQ-KPLLT-PDIWVT 68 (249)
T ss_pred HHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhc-CCCCC-CCEEEE
Confidence 3456666666 88999999999999999999998 88764 555554
No 224
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=67.86 E-value=12 Score=33.13 Aligned_cols=51 Identities=12% Similarity=0.007 Sum_probs=38.6
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
....-|..+.++.+.+ ++.| |+..||... .= .|+.+|||+-|.++++.+-+
T Consensus 225 SNs~rL~eiA~~~g~~---aylI-d~~~ei~~~-w~---~~~~~VGvTAGAStPd~lV~ 275 (294)
T COG0761 225 SNSNRLAEIAKRHGKP---AYLI-DDAEEIDPE-WL---KGVKTVGVTAGASTPDWLVQ 275 (294)
T ss_pred ccHHHHHHHHHHhCCC---eEEe-CChHhCCHH-Hh---cCccEEEEecCCCCCHHHHH
Confidence 3344566677766643 3666 788999999 87 89999999999999887644
No 225
>PLN02580 trehalose-phosphatase
Probab=67.83 E-value=7.9 Score=35.58 Aligned_cols=69 Identities=19% Similarity=0.109 Sum_probs=42.7
Q ss_pred ChHHHHHHHHhcCCCCCC-c--EEEEcCChhhHHHhhccC-cc-CCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 140 PKVEVLKQLQKKPELQGM-T--LHFVEDRLATLKNVIKEP-EL-DGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~-e--~l~IGDs~~Di~aA~k~~-~~-AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
.|-..++.+++.++++.. . .+||||..+|..+= +.. .. .|+ .|.|.-| .. + -.+. |-+.++.|+.
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF-~~L~~~~~G~-~I~Vgn~--~~-~---t~A~--y~L~dp~eV~ 370 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAF-KVLREGNRGY-GILVSSV--PK-E---SNAF--YSLRDPSEVM 370 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHH-HhhhccCCce-EEEEecC--CC-C---ccce--EEcCCHHHHH
Confidence 455667778877765433 2 38999999999887 520 00 243 3444322 21 1 1335 8899999988
Q ss_pred hhcC
Q 027821 215 RKLK 218 (218)
Q Consensus 215 ~~~~ 218 (218)
.||+
T Consensus 371 ~~L~ 374 (384)
T PLN02580 371 EFLK 374 (384)
T ss_pred HHHH
Confidence 8874
No 226
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=67.58 E-value=12 Score=32.01 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=31.0
Q ss_pred CCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 91 YPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 91 ~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
.+-..++|+ ++|++++++|+++...+..+++. +|++
T Consensus 26 ~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~-l~~~ 64 (271)
T PRK03669 26 WQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQT-LGLQ 64 (271)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH-hCCC
Confidence 345667776 89999999999999999999999 9985
No 227
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=67.42 E-value=10 Score=34.86 Aligned_cols=91 Identities=21% Similarity=0.289 Sum_probs=56.8
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCCh------------HHHHHHHHHhcCCC-CCCceEEcCC-CCChHHHHHHHHhc
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQS------------RFADALLRELAGVT-IPPDRIYGLG-TGPKVEVLKQLQKK 151 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~------------~~~~~iL~~~~gl~-~~Fd~I~g~d-~kpkPe~l~~l~~~ 151 (218)
.+||-++.=|. +.|+.++|.||+.. ..++.++.. +|+- ..+.+++... +||--.|+..+...
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~an-l~vPi~~~~A~~~~~yRKP~tGMwe~~~~~ 182 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVAN-LGVPIQLLAAIIKGKYRKPSTGMWEFLKRL 182 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHh-cCCceEEeeeccCCcccCcchhHHHHHHHH
Confidence 47888888888 89999999999764 446667776 6653 1122222223 67777777555533
Q ss_pred C----CCCCCcEEEEcCC---------------hhhHHHhhccCccCCceEE
Q 027821 152 P----ELQGMTLHFVEDR---------------LATLKNVIKEPELDGWNLY 184 (218)
Q Consensus 152 ~----~~~~~e~l~IGDs---------------~~Di~aA~k~~~~AGv~~i 184 (218)
. .+.-..+.||||. ..|+.-| .+ +|+.+.
T Consensus 183 ~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FA-aN---~gvkF~ 230 (422)
T KOG2134|consen 183 ENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFA-AN---AGVKFK 230 (422)
T ss_pred hhccceeeechhhhhhhhccCccccccCcccccHHHHHHH-Hh---cCCccC
Confidence 3 2222333577773 4567777 77 777553
No 228
>PLN02423 phosphomannomutase
Probab=67.23 E-value=7.1 Score=33.18 Aligned_cols=39 Identities=15% Similarity=-0.020 Sum_probs=33.5
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcC----ChhhHHHhhccCccCCceEEEEe
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGD----s~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.|...++.++ ++++++.+|| ..||+++- +. -|+.++.|+
T Consensus 189 nKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl-~~---~~~~~~~~~ 231 (245)
T PLN02423 189 DKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIF-ES---ERTIGHTVT 231 (245)
T ss_pred CHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHH-hC---CCcceEEeC
Confidence 7777888887 5678899999 79999999 86 699999994
No 229
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=64.61 E-value=30 Score=32.92 Aligned_cols=66 Identities=11% Similarity=0.068 Sum_probs=44.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 58 WSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
.|+..++++.....+...++... . -+...+...+.| +.+|||..++-.++..++.|+|. |.|+|.+
T Consensus 74 ~Gl~~~die~vaRavlpkf~~~d-------v--~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTE 139 (498)
T PLN02499 74 AGVHESEIESVARAVLPKFYMDD-------V--DMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSE 139 (498)
T ss_pred CCCCHHHHHHHHHHHhhHHHHhh-------C--CHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeee
Confidence 47777777666666665553322 1 122334444666 99999999999999999987774 5565554
No 230
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=63.50 E-value=63 Score=33.03 Aligned_cols=106 Identities=26% Similarity=0.308 Sum_probs=68.6
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCCC---CceEEcCC-CC----------ChHHH------
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTIP---PDRIYGLG-TG----------PKVEV------ 144 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~~---Fd~I~g~d-~k----------pkPe~------ 144 (218)
.+.-|||++.++ ++|+++-.||+.+-..++++-.+ +||-.. |-.+-|.+ ++ ||=.+
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~e-CGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP 724 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARE-CGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP 724 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHH-cccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence 467899999999 89999999999999999999999 999533 33444544 11 22111
Q ss_pred -----HHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE
Q 027821 145 -----LKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL 207 (218)
Q Consensus 145 -----l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~ 207 (218)
+-+.+.+.+ +=+-+-||..+|.-|- |. |.+-. .-|..-.+.-++ .+| +|+
T Consensus 725 ~DK~lLVk~L~~~g---~VVAVTGDGTNDaPAL-ke---ADVGl---AMGIaGTeVAKE-aSD--IIi 779 (1034)
T KOG0204|consen 725 NDKHLLVKGLIKQG---EVVAVTGDGTNDAPAL-KE---ADVGL---AMGIAGTEVAKE-ASD--III 779 (1034)
T ss_pred chHHHHHHHHHhcC---cEEEEecCCCCCchhh-hh---cccch---hccccchhhhhh-hCC--eEE
Confidence 111122222 2224679999999999 98 87633 345433344333 445 654
No 231
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=63.47 E-value=11 Score=37.24 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=34.9
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEE--cCChhhHHHhhccCccCCceEEE
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFV--EDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~I--GDs~~Di~aA~k~~~~AGv~~i~ 185 (218)
.|-..++.+++.++++..+++.| ||+.||+.+= +. +|..++-
T Consensus 613 dKG~AL~~L~e~~gI~~~eViafalGDs~NDisML-e~---Ag~gVAM 656 (694)
T PRK14502 613 DKGKAIKILNELFRLNFGNIHTFGLGDSENDYSML-ET---VDSPILV 656 (694)
T ss_pred CHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHH-Hh---CCceEEE
Confidence 78888888888887776777888 9999999999 88 9985443
No 232
>PTZ00174 phosphomannomutase; Provisional
Probab=62.93 E-value=12 Score=31.54 Aligned_cols=40 Identities=15% Similarity=0.031 Sum_probs=32.8
Q ss_pred ChHHHHHHHHhcCCCCCCcEEEEcC----ChhhHHHhhccCccCCceEEEEe
Q 027821 140 PKVEVLKQLQKKPELQGMTLHFVED----RLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~e~l~IGD----s~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.|...++.+++. .++++.||| +.||+.+= +. ++...++|.
T Consensus 188 sKg~al~~L~~~----~~eviafGD~~~~~~NDieMl-~~---~~~~g~~v~ 231 (247)
T PTZ00174 188 DKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIY-ND---PRTIGHSVK 231 (247)
T ss_pred cHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhh-hc---CCCceEEeC
Confidence 777888888876 368899999 89999999 88 777666665
No 233
>PRK00208 thiG thiazole synthase; Reviewed
Probab=61.59 E-value=1.1e+02 Score=26.56 Aligned_cols=95 Identities=17% Similarity=0.131 Sum_probs=66.2
Q ss_pred CCCCCChHHHHH------hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCc--eEEcCCCC-ChHHHHHHHHhcCCCCCCc
Q 027821 88 NRFYPGIPDALK------FASSRIYIVTTKQSRFADALLRELAGVTIPPD--RIYGLGTG-PKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 88 ~~l~pGv~e~L~------~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd--~I~g~d~k-pkPe~l~~l~~~~~~~~~e 158 (218)
-.++|.+.++++ +.|+.+.-+++.+...++++.+ +|-+-..- .-+|+..+ .+|+.++.+.+..++ +
T Consensus 103 ~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~--~G~~~vmPlg~pIGsg~gi~~~~~i~~i~e~~~v-p-- 177 (250)
T PRK00208 103 KTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEE--AGCAAVMPLGAPIGSGLGLLNPYNLRIIIEQADV-P-- 177 (250)
T ss_pred CCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH--cCCCEeCCCCcCCCCCCCCCCHHHHHHHHHhcCC-e--
Confidence 458999999999 5699988455556566766665 57653221 23344433 469998888876543 3
Q ss_pred EEEEc---CChhhHHHhhccCccCCceEEEEecCCCC
Q 027821 159 LHFVE---DRLATLKNVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 159 ~l~IG---Ds~~Di~aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
+++| -++.|+..| -+ .|...+.|.++...
T Consensus 178 -VIveaGI~tpeda~~A-me---lGAdgVlV~SAItk 209 (250)
T PRK00208 178 -VIVDAGIGTPSDAAQA-ME---LGADAVLLNTAIAV 209 (250)
T ss_pred -EEEeCCCCCHHHHHHH-HH---cCCCEEEEChHhhC
Confidence 4665 458899999 77 99999999998754
No 234
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=60.14 E-value=24 Score=31.28 Aligned_cols=40 Identities=23% Similarity=0.493 Sum_probs=31.9
Q ss_pred CCCCCChHHHHH---hCC-CcEEEEcCCChHHHHHHHHHhcCCCCCCceEE
Q 027821 88 NRFYPGIPDALK---FAS-SRIYIVTTKQSRFADALLRELAGVTIPPDRIY 134 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g-~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~ 134 (218)
..+||...|+++ +.| ++.+|+||... ..+++. +. .+|.++
T Consensus 91 PTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~-L~---~~dql~ 134 (296)
T COG0731 91 PTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEE-LK---LPDQLY 134 (296)
T ss_pred cccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHH-hc---cCCEEE
Confidence 479999999999 777 79999999997 566666 54 467664
No 235
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=59.99 E-value=34 Score=30.48 Aligned_cols=74 Identities=7% Similarity=-0.014 Sum_probs=46.7
Q ss_pred EEEcCCChHHHHHHHHHhcCCC----CCCceEEc------------------CC--CCChHHHHHHHHhcCCC--CCCcE
Q 027821 106 YIVTTKQSRFADALLRELAGVT----IPPDRIYG------------------LG--TGPKVEVLKQLQKKPEL--QGMTL 159 (218)
Q Consensus 106 aIvTnk~~~~~~~iL~~~~gl~----~~Fd~I~g------------------~d--~kpkPe~l~~l~~~~~~--~~~e~ 159 (218)
.+-+....+. ...+.+ .|+. ..|-.+.+ .+ ..+|-..++.+.+.+.. ....+
T Consensus 152 ~~w~~~~~~~-~~~~~~-~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~~~~~t 229 (302)
T PRK12702 152 FSYSGDPARL-REAFAQ-QEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHLGPIKA 229 (302)
T ss_pred eEecCCHHHH-HHHHHH-cCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhccCCceE
Confidence 3335555544 777777 7874 44555555 21 12666666555544432 34578
Q ss_pred EEEcCChhhHHHhhccCccCCceEEE
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYL 185 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~ 185 (218)
+-+|||+||+.+= +. +.+.+|-
T Consensus 230 iaLGDspND~~mL-e~---~D~~vvi 251 (302)
T PRK12702 230 LGIGCSPPDLAFL-RW---SEQKVVL 251 (302)
T ss_pred EEecCChhhHHHH-Hh---CCeeEEe
Confidence 9999999999999 87 7766653
No 236
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=57.59 E-value=22 Score=27.39 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=32.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChH---------------HHHHHHHHhcCCCCCCceE
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSR---------------FADALLRELAGVTIPPDRI 133 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~---------------~~~~iL~~~~gl~~~Fd~I 133 (218)
..+.+++.++|+ ++|+.++++|+++.. .+...|++ .++. +|.+
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k-~~ip--Yd~l 83 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ-HNVP--YDEI 83 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-cCCC--CceE
Confidence 346788999997 789999999999875 34566667 6764 4555
No 237
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=57.11 E-value=6.3 Score=35.97 Aligned_cols=85 Identities=19% Similarity=0.259 Sum_probs=54.9
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcC--CCCCCceEEcCCCCCh-------H--------H--------------H----
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAG--VTIPPDRIYGLGTGPK-------V--------E--------------V---- 144 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~g--l~~~Fd~I~g~d~kpk-------P--------e--------------~---- 144 (218)
++|.++.++||++-.++..-++.+.| +.+.||+|+.-..||+ | + +
T Consensus 254 ~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~klekgkiYy~G 333 (510)
T KOG2470|consen 254 DHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVDKLEKGKIYYQG 333 (510)
T ss_pred HhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhhhcccCceeeec
Confidence 89999999999999999988876334 4588998864321211 1 0 0
Q ss_pred -HHHHHhcCCCCCCcEEEEcCChh-hHHHhhccCccCCceEEEEe
Q 027821 145 -LKQLQKKPELQGMTLHFVEDRLA-TLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 145 -l~~l~~~~~~~~~e~l~IGDs~~-Di~aA~k~~~~AGv~~i~V~ 187 (218)
+..+++.-+-...+++|+||.++ |+..---. +||++-++-
T Consensus 334 ~l~~flelt~WrG~~VlYFGDHlySDLad~tlk---hgWRTgAII 375 (510)
T KOG2470|consen 334 NLKSFLELTGWRGPRVLYFGDHLYSDLADLTLK---HGWRTGAII 375 (510)
T ss_pred cHHHHHHHhccCCCeeEEecCcchhhhhhhHhh---cccccccch
Confidence 13333333334567899999975 44433114 788887763
No 238
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=56.44 E-value=19 Score=36.64 Aligned_cols=70 Identities=13% Similarity=0.076 Sum_probs=43.2
Q ss_pred ChHHHHHHHHh---cCCCCCCcEEEEcCChhhHHHhhccCcc--CC--c----eEEEEecCCCCHHHHHhccCCCCeEEc
Q 027821 140 PKVEVLKQLQK---KPELQGMTLHFVEDRLATLKNVIKEPEL--DG--W----NLYLGDWGYNTQKEREEAASIPRIQLL 208 (218)
Q Consensus 140 pkPe~l~~l~~---~~~~~~~e~l~IGDs~~Di~aA~k~~~~--AG--v----~~i~V~~G~~~~~~l~~a~~~p~~~~~ 208 (218)
.|-..++.++. ..+..+.++++|||..+|..+= +..+. .| + ..++|+=|-.. -.+. |-++
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF-~~~~~~~~g~~~~~~~~~~~v~VG~~~------S~A~--y~L~ 832 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMF-EVITSSMAGPSIAPRAEVFACTVGQKP------SKAK--YYLD 832 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHH-HHhhhhccCCcccccccceeEEECCCC------ccCe--EecC
Confidence 55556666653 3455678899999999998886 55110 11 1 12344435321 1234 7799
Q ss_pred ChhHHHhhcC
Q 027821 209 QLSDFSRKLK 218 (218)
Q Consensus 209 ~~~~l~~~~~ 218 (218)
+++|+.+||+
T Consensus 833 d~~eV~~lL~ 842 (854)
T PLN02205 833 DTAEIVRLMQ 842 (854)
T ss_pred CHHHHHHHHH
Confidence 9999998874
No 239
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=56.28 E-value=95 Score=27.33 Aligned_cols=79 Identities=14% Similarity=-0.043 Sum_probs=49.6
Q ss_pred EEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCCh----HHHH---HHHHhcCCCCCCcEEEEcCChhh---HHHhhc
Q 027821 105 IYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPK----VEVL---KQLQKKPELQGMTLHFVEDRLAT---LKNVIK 174 (218)
Q Consensus 105 laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpk----Pe~l---~~l~~~~~~~~~e~l~IGDs~~D---i~aA~k 174 (218)
..|+|+.+.+..+.+++. +++..-++..++...... ...+ .++..+.. ++=++..||+... ..+| +
T Consensus 32 ~~~~tg~h~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--pDiv~~~gd~~~~la~a~aa-~ 107 (365)
T TIGR00236 32 YVIVTAQHREMLDQVLDL-FHLPPDYDLNIMSPGQTLGEITSNMLEGLEELLLEEK--PDIVLVQGDTTTTLAGALAA-F 107 (365)
T ss_pred EEEEeCCCHHHHHHHHHh-cCCCCCeeeecCCCCCCHHHHHHHHHHHHHHHHHHcC--CCEEEEeCCchHHHHHHHHH-H
Confidence 578888888889999988 999743444444431121 1222 44444443 4445777897654 4556 6
Q ss_pred cCccCCceEEEEecCC
Q 027821 175 EPELDGWNLYLGDWGY 190 (218)
Q Consensus 175 ~~~~AGv~~i~V~~G~ 190 (218)
. .|++++.+..|.
T Consensus 108 ~---~~ipv~h~~~g~ 120 (365)
T TIGR00236 108 Y---LQIPVGHVEAGL 120 (365)
T ss_pred H---hCCCEEEEeCCC
Confidence 5 899998876554
No 240
>PF04028 DUF374: Domain of unknown function (DUF374); InterPro: IPR007172 This is a bacterial domain of unknown function.
Probab=53.83 E-value=73 Score=22.17 Aligned_cols=52 Identities=13% Similarity=0.271 Sum_probs=33.8
Q ss_pred CCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChh
Q 027821 110 TKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLA 167 (218)
Q Consensus 110 nk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~ 167 (218)
|++-+.+..++++ +| ++.|-|+..+.-...++.+..... +-..+.+.=|.+.
T Consensus 19 s~DGe~ia~~~~~-~G----~~~iRGSs~rgg~~Alr~~~~~lk-~G~~~~itpDGPr 70 (74)
T PF04028_consen 19 SRDGELIARVLER-FG----FRTIRGSSSRGGARALREMLRALK-EGYSIAITPDGPR 70 (74)
T ss_pred CcCHHHHHHHHHH-cC----CCeEEeCCCCcHHHHHHHHHHHHH-CCCeEEEeCCCCC
Confidence 6778899999999 98 467888875555555544444443 3334456666553
No 241
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=53.72 E-value=1.2e+02 Score=25.94 Aligned_cols=35 Identities=11% Similarity=0.044 Sum_probs=27.1
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
++||.+.+.+..| -. +|++++++.|......-+..
T Consensus 253 ~vI~~RlH~~I~A-~~---~gvP~i~i~y~~K~~~~~~~ 287 (298)
T TIGR03609 253 LVIGMRLHALILA-AA---AGVPFVALSYDPKVRAFAAD 287 (298)
T ss_pred EEEEechHHHHHH-HH---cCCCEEEeeccHHHHHHHHH
Confidence 7999999999999 77 99999999765433333333
No 242
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=52.57 E-value=88 Score=26.67 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=48.6
Q ss_pred hCCCcEEEEcCCCh---HHHHHHHHHhcCCCCCCceE--EcCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhh
Q 027821 100 FASSRIYIVTTKQS---RFADALLRELAGVTIPPDRI--YGLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVI 173 (218)
Q Consensus 100 ~~g~~laIvTnk~~---~~~~~iL~~~~gl~~~Fd~I--~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~ 173 (218)
+.++.+-|+++.-. +.++..... .--..-.|+| +|.. .-|-|.--+.+....++++ +.|||.+ +.++-
T Consensus 29 Redi~vrVvgsgaKM~Pe~veaav~~-~~e~~~pDfvi~isPNpaaPGP~kARE~l~~s~~Pa---iiigDaP-g~~vk- 102 (277)
T COG1927 29 REDIEVRVVGSGAKMDPECVEAAVTE-MLEEFNPDFVIYISPNPAAPGPKKAREILSDSDVPA---IIIGDAP-GLKVK- 102 (277)
T ss_pred cCCceEEEeccccccChHHHHHHHHH-HHHhcCCCEEEEeCCCCCCCCchHHHHHHhhcCCCE---EEecCCc-cchhH-
Confidence 77888988887532 333443333 1111123444 3334 3377777888888877666 7999998 55443
Q ss_pred ccCccCCceEEEEe
Q 027821 174 KEPELDGWNLYLGD 187 (218)
Q Consensus 174 k~~~~AGv~~i~V~ 187 (218)
......|.-.|.+.
T Consensus 103 deleeqGlGYIivk 116 (277)
T COG1927 103 DELEEQGLGYIIVK 116 (277)
T ss_pred HHHHhcCCeEEEec
Confidence 33233777777664
No 243
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=52.41 E-value=19 Score=29.05 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=30.1
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcC
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAG 125 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~g 125 (218)
++-+.+.++|+ ++|++++|+|+++...+..+++. ++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~-~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQ-LP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHh-CC
Confidence 34567778888 78899999999999999999887 54
No 244
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=51.97 E-value=1.5e+02 Score=25.89 Aligned_cols=94 Identities=14% Similarity=0.106 Sum_probs=71.0
Q ss_pred CCCCCChHHHHH------hCCCcEEEEcCCChHHHHHHHHHhcCCCCCC--ceEEcCCCC-ChHHHHHHHHhcCCCCCCc
Q 027821 88 NRFYPGIPDALK------FASSRIYIVTTKQSRFADALLRELAGVTIPP--DRIYGLGTG-PKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 88 ~~l~pGv~e~L~------~~g~~laIvTnk~~~~~~~iL~~~~gl~~~F--d~I~g~d~k-pkPe~l~~l~~~~~~~~~e 158 (218)
-.++|...|+|+ +.|+.+.--+|.+.-.++++.+ .|-.-.. -.=+|+..+ ..|..++.+.+.+.+.
T Consensus 117 ~~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLed--~Gc~aVMPlgsPIGSg~Gl~n~~~l~~i~e~~~vp--- 191 (267)
T CHL00162 117 KYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLED--IGCATVMPLGSPIGSGQGLQNLLNLQIIIENAKIP--- 191 (267)
T ss_pred cccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHHH--cCCeEEeeccCcccCCCCCCCHHHHHHHHHcCCCc---
Confidence 469999999999 8999999999999988877766 4754211 111233344 7899999999887643
Q ss_pred EEEEcC---ChhhHHHhhccCccCCceEEEEecCCC
Q 027821 159 LHFVED---RLATLKNVIKEPELDGWNLYLGDWGYN 191 (218)
Q Consensus 159 ~l~IGD---s~~Di~aA~k~~~~AGv~~i~V~~G~~ 191 (218)
+++|= ++.|+..| -+ .|...++++.|..
T Consensus 192 -VivdAGIgt~sDa~~A-mE---lGaDgVL~nSaIa 222 (267)
T CHL00162 192 -VIIDAGIGTPSEASQA-ME---LGASGVLLNTAVA 222 (267)
T ss_pred -EEEeCCcCCHHHHHHH-HH---cCCCEEeecceee
Confidence 46653 67899999 77 9999999998853
No 245
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=51.44 E-value=14 Score=32.70 Aligned_cols=47 Identities=21% Similarity=0.283 Sum_probs=33.5
Q ss_pred CCCCCChHHHHH---hC----CCcEEEEcCCC---hHH-HHHHHHHhcCCCCCCceEEc
Q 027821 88 NRFYPGIPDALK---FA----SSRIYIVTTKQ---SRF-ADALLRELAGVTIPPDRIYG 135 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~----g~~laIvTnk~---~~~-~~~iL~~~~gl~~~Fd~I~g 135 (218)
..++||+.++|+ .+ |++..++||.. ++. ++.+.++ +|+.--.+.|++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~-lG~~~~~~~i~~ 72 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSL-LGVDVSPLQVIQ 72 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHH-cCCCCCHHHHHh
Confidence 467999999998 55 99999999986 343 4555577 888644444433
No 246
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=51.13 E-value=59 Score=30.95 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=73.0
Q ss_pred cccCCCCCChH--HHHH---hCCCcEEEEcC--CChHHHHHHHHHhcCCCCCCceEEcCC----CCChHHHHHHHHhcCC
Q 027821 85 IGANRFYPGIP--DALK---FASSRIYIVTT--KQSRFADALLRELAGVTIPPDRIYGLG----TGPKVEVLKQLQKKPE 153 (218)
Q Consensus 85 ~~~~~l~pGv~--e~L~---~~g~~laIvTn--k~~~~~~~iL~~~~gl~~~Fd~I~g~d----~kpkPe~l~~l~~~~~ 153 (218)
.+...+||... ++.+ ..|.++.++|- =+.+.++.+|.. +|.+.+=--|+.+. .|...+.+..++..-.
T Consensus 93 tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s-~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~En 171 (635)
T COG5610 93 TEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNS-FGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLEN 171 (635)
T ss_pred cceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHh-cCCCccCceeeecceeehhcccchHHHHHHhhcC
Confidence 44456888654 5555 88999999995 567889999999 99886655466553 4555678888887777
Q ss_pred CCCCcEEEEcCCh-hhHHHhhccCccCCceEEEE
Q 027821 154 LQGMTLHFVEDRL-ATLKNVIKEPELDGWNLYLG 186 (218)
Q Consensus 154 ~~~~e~l~IGDs~-~Di~aA~k~~~~AGv~~i~V 186 (218)
+++...+-+||.. .|...+ ++ -|+.|...
T Consensus 172 Vd~~~w~H~GDN~~aD~l~p-k~---LgI~Tlf~ 201 (635)
T COG5610 172 VDPKKWIHCGDNWVADYLKP-KN---LGISTLFY 201 (635)
T ss_pred CChhheEEecCchhhhhcCc-cc---cchhHHHH
Confidence 8888999999974 688888 98 88766544
No 247
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=49.97 E-value=1.1e+02 Score=24.48 Aligned_cols=88 Identities=14% Similarity=0.098 Sum_probs=54.4
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChH---HHHHHHHHhc---CCCCCCceEEcC----------C-CCChHHHH---
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSR---FADALLRELA---GVTIPPDRIYGL----------G-TGPKVEVL--- 145 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~---~~~~iL~~~~---gl~~~Fd~I~g~----------d-~kpkPe~l--- 145 (218)
...|||.++.+ ++|+++.=+|+++-- .++.-|.. . |..-..--+..+ + -..+|+.+
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~-~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~ 105 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQ-HQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKIA 105 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHH-HHhCCccCCCCCEEECCcchhhhhhccccccChHHHHHH
Confidence 56799999999 999999999999853 45555555 4 222222233333 2 12456644
Q ss_pred --HHHHhcCC--CCCCcEEEEcCChhhHHHhhccCccCCce
Q 027821 146 --KQLQKKPE--LQGMTLHFVEDRLATLKNVIKEPELDGWN 182 (218)
Q Consensus 146 --~~l~~~~~--~~~~e~l~IGDs~~Di~aA~k~~~~AGv~ 182 (218)
..+...+. ..+ =..-.|.+.+|+.+= ++ +|++
T Consensus 106 ~L~~l~~~f~~~~~p-f~agfGN~~tDv~aY-~~---vGip 141 (157)
T PF08235_consen 106 CLRDLRALFPPDGNP-FYAGFGNRSTDVIAY-KA---VGIP 141 (157)
T ss_pred HHHHHHHhcCCCCCe-EEEecCCcHHHHHHH-HH---cCCC
Confidence 44444321 111 012489999999999 88 7874
No 248
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=47.93 E-value=94 Score=24.37 Aligned_cols=40 Identities=18% Similarity=0.124 Sum_probs=32.3
Q ss_pred cCCCCCChHHHHH---hCCCcEEEEcCCC-hHHHHHHHHHhcCCC
Q 027821 87 ANRFYPGIPDALK---FASSRIYIVTTKQ-SRFADALLRELAGVT 127 (218)
Q Consensus 87 ~~~l~pGv~e~L~---~~g~~laIvTnk~-~~~~~~iL~~~~gl~ 127 (218)
....|+.++..|. ++|+.++++|+.. .+.+...|+. +.+.
T Consensus 42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~-fkvk 85 (144)
T KOG4549|consen 42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLET-FKVK 85 (144)
T ss_pred eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHH-hccC
Confidence 3467888888887 9999999999754 4678889988 7765
No 249
>KOG4094 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.42 E-value=13 Score=29.61 Aligned_cols=96 Identities=18% Similarity=0.224 Sum_probs=51.6
Q ss_pred hhcCccccccccCCCCChHHHHHhhhccHH------HHHHhcCCCHHHHHHHHHHHHHHHHhcccccccccCCCCCC-hH
Q 027821 23 EIRMPSIRKSSVSEGLTVEGILENWSKIKP------VIMEDWSENRDALVDLFGKVRDEWMDKDLTTWIGANRFYPG-IP 95 (218)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pG-v~ 95 (218)
+-++|+||. |+.-++.+-...|+|..+ -+...++.++..++..+...|++..+-..++|.++..+|.- =.
T Consensus 31 ~dt~p~~g~---s~~~~p~~~~~DwiGPPD~~SnlRp~v~~y~deEs~Ler~lRl~R~E~~~WN~dFWa~hN~~F~~eKe 107 (178)
T KOG4094|consen 31 RDTMPSIGS---SSSNVPMDRRFDWIGPPDNLSNLRPIVLRYVDEESELERQLRLAREELNQWNSDFWAEHNQLFDREKE 107 (178)
T ss_pred CCcCCcCCC---CCCCCccccccCccCCchhhhhhhHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 457899973 344455566678888211 11223333344455555555655555446788887777753 33
Q ss_pred HHHH-----hCCCcEEEEc-CCChHHHHHHHHH
Q 027821 96 DALK-----FASSRIYIVT-TKQSRFADALLRE 122 (218)
Q Consensus 96 e~L~-----~~g~~laIvT-nk~~~~~~~iL~~ 122 (218)
|+++ +.|- +.=|| |.-.++-+..|.+
T Consensus 108 dFi~~kL~~EsG~-~~~vsA~ems~FYk~FL~k 139 (178)
T KOG4094|consen 108 DFIERKLQQESGR-LEHVSANEMSEFYKDFLNK 139 (178)
T ss_pred HHHHHHHHHhhcc-ccccCHHHHHHHHHHHHhh
Confidence 4444 3343 33333 4445566666654
No 250
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=46.67 E-value=96 Score=31.74 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=64.2
Q ss_pred CCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC----CCc---------------------eEEcCCCC-
Q 027821 89 RFYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI----PPD---------------------RIYGLGTG- 139 (218)
Q Consensus 89 ~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~----~Fd---------------------~I~g~d~k- 139 (218)
+|-+.++++.. .+|+++..||..+.-.++++-+. -||-. -++ +|.|.+-+
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~-vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~ 668 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKS-VGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD 668 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhh-eeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc
Confidence 55667777777 89999999999988777777777 66421 111 12233311
Q ss_pred ChHHHHHHHHhcCC--------------------CCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHhc
Q 027821 140 PKVEVLKQLQKKPE--------------------LQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREEA 199 (218)
Q Consensus 140 pkPe~l~~l~~~~~--------------------~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a 199 (218)
-.++-+.+++..+. -..+=+-+.||..||-=|- |. |.+ ||.-|+...+.-+++
T Consensus 669 ~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPAL-KK---ADI---GVAMGiaGSDvsKqA 741 (1019)
T KOG0203|consen 669 MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPAL-KK---ADI---GVAMGIAGSDVSKQA 741 (1019)
T ss_pred cCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhh-cc---ccc---ceeeccccchHHHhh
Confidence 22444433333221 0011234679999999998 88 765 666787777766654
Q ss_pred cCC
Q 027821 200 ASI 202 (218)
Q Consensus 200 ~~~ 202 (218)
+|
T Consensus 742 -AD 743 (1019)
T KOG0203|consen 742 -AD 743 (1019)
T ss_pred -cc
Confidence 45
No 251
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=45.83 E-value=30 Score=34.29 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=31.7
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI 128 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~ 128 (218)
.++-..++|+ ++|+++++||++....+..+++. +|+..
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~-Lgl~~ 474 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNE-LGIKD 474 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH-cCCCC
Confidence 3445567777 89999999999999999999999 99764
No 252
>COG2121 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.53 E-value=1.4e+02 Score=25.23 Aligned_cols=77 Identities=17% Similarity=0.217 Sum_probs=52.1
Q ss_pred cEEEEc-CCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhh---------HHHhh
Q 027821 104 RIYIVT-TKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLAT---------LKNVI 173 (218)
Q Consensus 104 ~laIvT-nk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~D---------i~aA~ 173 (218)
..+++| +++.+.+..++++ +|+ ..|.|+..|.--..++.+...+. +-.++.+.=|.+.+ +.-|
T Consensus 70 ~~amvS~s~DGEliA~~l~k-fG~----~~IRGSs~Kgg~~Alr~l~k~Lk-~G~~i~itpDgPkGp~~~~~~Gii~LA- 142 (214)
T COG2121 70 IYAMVSPSRDGELIARLLEK-FGL----RVIRGSSNKGGISALRALLKALK-QGKSIAITPDGPKGPVHKIGDGIIALA- 142 (214)
T ss_pred EEEEEcCCcCHHHHHHHHHH-cCc----eEEeccCCcchHHHHHHHHHHHh-CCCcEEEcCCCCCCCceeccchhhHhh-
Confidence 355566 6788899999999 995 67888875544445555555554 45566788887772 3445
Q ss_pred ccCccCCceEEEEecCC
Q 027821 174 KEPELDGWNLYLGDWGY 190 (218)
Q Consensus 174 k~~~~AGv~~i~V~~G~ 190 (218)
+. .|++.+.|..-+
T Consensus 143 ~~---sg~pi~pv~~~~ 156 (214)
T COG2121 143 QK---SGVPIIPVGVAT 156 (214)
T ss_pred Hh---cCCCeEEEEEee
Confidence 66 888877775443
No 253
>PLN02887 hydrolase family protein
Probab=44.46 E-value=43 Score=32.48 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=32.4
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHHhcCCCC
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRELAGVTI 128 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~~~gl~~ 128 (218)
+-+...++|+ ++|++++|||+++...+..+++. +++..
T Consensus 326 Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~-L~l~~ 366 (580)
T PLN02887 326 ISETNAKALKEALSRGVKVVIATGKARPAVIDILKM-VDLAG 366 (580)
T ss_pred cCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH-hCccc
Confidence 4456677777 89999999999999999999999 88853
No 254
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=42.96 E-value=1.4e+02 Score=24.17 Aligned_cols=26 Identities=12% Similarity=-0.043 Sum_probs=24.1
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEecC
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G 189 (218)
++|+.+.+....| -. .|+++|++.|.
T Consensus 260 ~~Is~RlH~~I~a-~~---~g~P~i~i~y~ 285 (286)
T PF04230_consen 260 LVISMRLHGAILA-LS---LGVPVIAISYD 285 (286)
T ss_pred EEEecCCHHHHHH-HH---cCCCEEEEecC
Confidence 7999999999999 77 99999999874
No 255
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=41.99 E-value=1.2e+02 Score=24.38 Aligned_cols=72 Identities=15% Similarity=0.136 Sum_probs=50.6
Q ss_pred cccCCCCCChHHHHH--hCCCcEEEEcCC--ChHHH----HHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCC
Q 027821 85 IGANRFYPGIPDALK--FASSRIYIVTTK--QSRFA----DALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQG 156 (218)
Q Consensus 85 ~~~~~l~pGv~e~L~--~~g~~laIvTnk--~~~~~----~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~ 156 (218)
.+.....|++.++++ -..+.++|||.. ...+. +=+++. +-+-++-..|+|+... .. .+
T Consensus 64 FRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~-FPFi~~qn~vfCgnKn---------iv----ka 129 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEK-FPFISYQNIVFCGNKN---------IV----KA 129 (180)
T ss_pred hhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHH-CCCCChhhEEEecCCC---------eE----Ee
Confidence 445678899999999 788999999976 33333 334455 6666677777777621 11 22
Q ss_pred CcEEEEcCChhhHHHh
Q 027821 157 MTLHFVEDRLATLKNV 172 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA 172 (218)
. ++|+|.+..++.=
T Consensus 130 D--ilIDDnp~nLE~F 143 (180)
T COG4502 130 D--ILIDDNPLNLENF 143 (180)
T ss_pred e--EEecCCchhhhhc
Confidence 2 7999999999988
No 256
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=41.88 E-value=1.9e+02 Score=24.16 Aligned_cols=69 Identities=16% Similarity=0.191 Sum_probs=52.1
Q ss_pred hCCCcEEEEcCCCh----HHHHHHHHHhcCCCCCCceEEcCC--------CCChHHHHHHHHhcCCCCCCcEEEEcCChh
Q 027821 100 FASSRIYIVTTKQS----RFADALLRELAGVTIPPDRIYGLG--------TGPKVEVLKQLQKKPELQGMTLHFVEDRLA 167 (218)
Q Consensus 100 ~~g~~laIvTnk~~----~~~~~iL~~~~gl~~~Fd~I~g~d--------~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~ 167 (218)
+...-.++.|+..+ +.++.+++. -||. ||.|+-.. ..-|-..+..++..+. .+.|+-+-+|++.
T Consensus 69 ~~dtltVLLTGR~e~~F~~lI~~ml~s-~~L~--Fd~v~LKp~~~~~~sTm~fK~~~l~~ll~~Y~-~~~eI~IYeDR~~ 144 (197)
T PF10307_consen 69 DPDTLTVLLTGRRESKFSSLIERMLAS-KGLE--FDAVCLKPENQRFSSTMDFKQAFLEDLLHTYK-NAEEIRIYEDRPK 144 (197)
T ss_pred CCCeeEEEEeCCCchhHHHHHHHHHhc-CCCC--ccEEEeCcccccCccccHHHHHHHHHHHHhcC-CCCEEEEEcCCHH
Confidence 55666788898885 457777877 7887 99886432 1245567788998887 8899999999998
Q ss_pred hHHHh
Q 027821 168 TLKNV 172 (218)
Q Consensus 168 Di~aA 172 (218)
-++.=
T Consensus 145 hvk~F 149 (197)
T PF10307_consen 145 HVKGF 149 (197)
T ss_pred HHHHH
Confidence 88764
No 257
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=41.64 E-value=1.6e+02 Score=24.52 Aligned_cols=78 Identities=13% Similarity=0.193 Sum_probs=44.0
Q ss_pred hHHHHHHHHHhcCCCCCCceEEcCCCC--ChHHHHHHHHhcCCCCCCcEEEEcCChhhH------HHhhccCccCCceEE
Q 027821 113 SRFADALLRELAGVTIPPDRIYGLGTG--PKVEVLKQLQKKPELQGMTLHFVEDRLATL------KNVIKEPELDGWNLY 184 (218)
Q Consensus 113 ~~~~~~iL~~~~gl~~~Fd~I~g~d~k--pkPe~l~~l~~~~~~~~~e~l~IGDs~~Di------~aA~k~~~~AGv~~i 184 (218)
.+.++.+-+. +|+... .+-..... -.+++...+..... ...+.++.||-..|. ..+ .. .|+.++
T Consensus 45 ~~~~~~~A~~-lgip~~--~i~~~~~~~~~~~~l~~~l~~~~~-~g~~~vv~G~i~sd~~~~~~e~v~-~~---~gl~~~ 116 (218)
T TIGR03679 45 IELTRLQAEA-LGIPLV--KIETSGEKEKEVEDLKGALKELKR-EGVEGIVTGAIASRYQKSRIERIC-EE---LGLKVF 116 (218)
T ss_pred HHHHHHHHHH-hCCCEE--EEECCCCChHHHHHHHHHHHHHHH-cCCCEEEECCcccHhHHHHHHHHH-Hh---CCCeEE
Confidence 4566777777 887532 22111111 11223222221111 124558999987765 445 56 899999
Q ss_pred EEecCCCCHHHHHh
Q 027821 185 LGDWGYNTQKEREE 198 (218)
Q Consensus 185 ~V~~G~~~~~~l~~ 198 (218)
.=.||....+.++.
T Consensus 117 ~PLw~~~~~el~~~ 130 (218)
T TIGR03679 117 APLWGRDQEEYLRE 130 (218)
T ss_pred eehhcCCHHHHHHH
Confidence 99999888776655
No 258
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=41.45 E-value=1.3e+02 Score=28.74 Aligned_cols=78 Identities=12% Similarity=-0.021 Sum_probs=44.6
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A 179 (218)
+.+-+++||+-...-..-..+..+++++ ++.+.-.+..--...+.++.. -+.+ ++|||... ...| +. .
T Consensus 95 ~~~~~ia~vg~~~~~~~~~~~~~ll~~~--i~~~~~~~~~e~~~~~~~l~~-~G~~----~viG~~~~-~~~A-~~---~ 162 (526)
T TIGR02329 95 RIASSIGVVTHQDTPPALRRFQAAFNLD--IVQRSYVTEEDARSCVNDLRA-RGIG----AVVGAGLI-TDLA-EQ---A 162 (526)
T ss_pred hcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHH-CCCC----EEECChHH-HHHH-HH---c
Confidence 5566899998655433333343336665 332211111111233445544 3433 69999965 6777 77 9
Q ss_pred CceEEEEecC
Q 027821 180 GWNLYLGDWG 189 (218)
Q Consensus 180 Gv~~i~V~~G 189 (218)
|++.|.+..|
T Consensus 163 gl~~ili~s~ 172 (526)
T TIGR02329 163 GLHGVFLYSA 172 (526)
T ss_pred CCceEEEecH
Confidence 9999999765
No 259
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=39.66 E-value=1.2e+02 Score=28.48 Aligned_cols=101 Identities=13% Similarity=0.053 Sum_probs=60.4
Q ss_pred cccCCCC-CChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC----C-CChHHHHHHHHhc-----
Q 027821 85 IGANRFY-PGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG----T-GPKVEVLKQLQKK----- 151 (218)
Q Consensus 85 ~~~~~l~-pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d----~-kpkPe~l~~l~~~----- 151 (218)
.....+| |.+.++++ +.-.+-..++.-....-....++ +++......++..+ . .|..+++..+...
T Consensus 125 ~~~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id~~~~~~~~~~-~~v~~VP~~~i~~~~~~~g~~~~~~~~~~l~~~~~~~~ 203 (515)
T TIGR03140 125 VSLTCQNCPDVVQALNQMALLNPNISHTMIDGALFQDEVEA-LGIQGVPAVFLNGEEFHNGRMDLAELLEKLEETAGVEA 203 (515)
T ss_pred EeCCCCCCHHHHHHHHHHHHhCCCceEEEEEchhCHHHHHh-cCCcccCEEEECCcEEEecCCCHHHHHHHHhhccCccc
Confidence 3334444 68888877 21111222333333445556677 88886666666544 1 2445565555433
Q ss_pred ----CCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 152 ----PELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 152 ----~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
...+.-++++||=.+.++.|| ......|.++..+.
T Consensus 204 ~~~~~~~~~~dVvIIGgGpAGl~AA-~~la~~G~~v~li~ 242 (515)
T TIGR03140 204 ASALEQLDPYDVLVVGGGPAGAAAA-IYAARKGLRTAMVA 242 (515)
T ss_pred chhccccCCCCEEEECCCHHHHHHH-HHHHHCCCcEEEEe
Confidence 222456789999999999999 65555788888763
No 260
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=39.06 E-value=2.9e+02 Score=24.89 Aligned_cols=94 Identities=17% Similarity=0.232 Sum_probs=67.3
Q ss_pred CCCCCChHHHHH------hCCCcEEEEcCCChHHHHHHHHHhcCCC--CCCceEEcCCCC-ChHHHHHHHHhcCCCCCCc
Q 027821 88 NRFYPGIPDALK------FASSRIYIVTTKQSRFADALLRELAGVT--IPPDRIYGLGTG-PKVEVLKQLQKKPELQGMT 158 (218)
Q Consensus 88 ~~l~pGv~e~L~------~~g~~laIvTnk~~~~~~~iL~~~~gl~--~~Fd~I~g~d~k-pkPe~l~~l~~~~~~~~~e 158 (218)
-.++|.+.++++ +.|+.+.++++.+...++++.+ +|-. ...-.-+|+..+ .+|+.++.+.+.+.+.
T Consensus 177 ~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~--~g~~avmPl~~pIGsg~gv~~p~~i~~~~e~~~vp--- 251 (326)
T PRK11840 177 KTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLED--AGAVAVMPLGAPIGSGLGIQNPYTIRLIVEGATVP--- 251 (326)
T ss_pred CCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh--cCCEEEeeccccccCCCCCCCHHHHHHHHHcCCCc---
Confidence 468999999999 5699997777777777776666 5652 011222344333 6899999988887643
Q ss_pred EEEEcC---ChhhHHHhhccCccCCceEEEEecCCC
Q 027821 159 LHFVED---RLATLKNVIKEPELDGWNLYLGDWGYN 191 (218)
Q Consensus 159 ~l~IGD---s~~Di~aA~k~~~~AGv~~i~V~~G~~ 191 (218)
++||= ++.|+..| -+ .|...++++.|..
T Consensus 252 -VivdAGIg~~sda~~A-me---lGadgVL~nSaIa 282 (326)
T PRK11840 252 -VLVDAGVGTASDAAVA-ME---LGCDGVLMNTAIA 282 (326)
T ss_pred -EEEeCCCCCHHHHHHH-HH---cCCCEEEEcceec
Confidence 46663 67899999 77 9999999998863
No 261
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=39.01 E-value=33 Score=29.48 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=30.2
Q ss_pred CCCCChHHHHH---h-CCCcEEEEcCCChHHHHHHHHHhcCC
Q 027821 89 RFYPGIPDALK---F-ASSRIYIVTTKQSRFADALLRELAGV 126 (218)
Q Consensus 89 ~l~pGv~e~L~---~-~g~~laIvTnk~~~~~~~iL~~~~gl 126 (218)
.+-|...+.|+ + .|+.++|+|+++...+...++. +++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~-~~~ 76 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKP-YRF 76 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCc-ccc
Confidence 45677888888 4 6999999999999999888876 653
No 262
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=38.80 E-value=90 Score=24.91 Aligned_cols=35 Identities=11% Similarity=0.121 Sum_probs=16.6
Q ss_pred CcEEEEcCChhhHHHhhcc-Ccc--CCceEEEEecCCCC
Q 027821 157 MTLHFVEDRLATLKNVIKE-PEL--DGWNLYLGDWGYNT 192 (218)
Q Consensus 157 ~e~l~IGDs~~Di~aA~k~-~~~--AGv~~i~V~~G~~~ 192 (218)
..+.++|.++..++.+ .+ --. -|+.+++..-||.+
T Consensus 49 ~~ifllG~~~~~~~~~-~~~l~~~yP~l~ivg~~~g~f~ 86 (172)
T PF03808_consen 49 KRIFLLGGSEEVLEKA-AANLRRRYPGLRIVGYHHGYFD 86 (172)
T ss_pred CeEEEEeCCHHHHHHH-HHHHHHHCCCeEEEEecCCCCC
Confidence 3456666666655533 11 000 15556666555543
No 263
>PRK00087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed
Probab=38.55 E-value=69 Score=31.39 Aligned_cols=50 Identities=14% Similarity=-0.015 Sum_probs=34.6
Q ss_pred hHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 141 KVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 141 kPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
...-|.++....+ .++++| ++..|+... .= .|..+||++-|.++++.+-+
T Consensus 220 Nt~~L~~i~~~~~---~~~~~i-e~~~el~~~-~~---~~~~~vgitagaStP~~~i~ 269 (647)
T PRK00087 220 NTTKLYEICKSNC---TNTIHI-ENAGELPEE-WF---KGVKIIGVTAGASTPDWIIE 269 (647)
T ss_pred cHHHHHHHHHHHC---CCEEEE-CChHHCCHH-Hh---CCCCEEEEEeccCCCHHHHH
Confidence 3444555665544 244777 556788777 66 78899999999999887643
No 264
>KOG0741 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=37.85 E-value=2e+02 Score=28.20 Aligned_cols=50 Identities=14% Similarity=0.085 Sum_probs=37.6
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCC
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPE 153 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~ 153 (218)
-+|.+|.|.+..++ ..+|++ +|+.+.|+..+....-.+++.+..++...+
T Consensus 637 pkg~kLli~~TTS~---~~vL~~-m~i~~~F~~~i~Vpnl~~~~~~~~vl~~~n 686 (744)
T KOG0741|consen 637 PKGRKLLIFGTTSR---REVLQE-MGILDCFSSTIHVPNLTTGEQLLEVLEELN 686 (744)
T ss_pred CCCceEEEEecccH---HHHHHH-cCHHHhhhheeecCccCchHHHHHHHHHcc
Confidence 67888888776663 457899 999999998887765566777766666554
No 265
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=35.49 E-value=96 Score=27.29 Aligned_cols=47 Identities=11% Similarity=-0.050 Sum_probs=31.8
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 143 EVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 143 e~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
.-|.++..+.+ .++++| ++..|+... .= .|...||++-|.++++.+-
T Consensus 224 ~rL~ei~~~~~---~~t~~I-e~~~el~~~-~l---~~~~~VGiTAGASTP~~li 270 (280)
T TIGR00216 224 TRLYEIAEEHG---PPSYLI-ETAEELPEE-WL---KGVKVVGITAGASTPDWII 270 (280)
T ss_pred HHHHHHHHHhC---CCEEEE-CChHHCCHH-Hh---CCCCEEEEEecCCCCHHHH
Confidence 34555565544 234666 566777777 65 7888899999988877653
No 266
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=34.19 E-value=94 Score=27.35 Aligned_cols=48 Identities=10% Similarity=-0.036 Sum_probs=32.0
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
..-|.++..+.+ .++++| ++..|+... += .|...||++-|.++++.+-
T Consensus 224 T~rL~eia~~~~---~~t~~I-e~~~el~~~-~~---~~~~~VGitaGASTP~~li 271 (281)
T PRK12360 224 TQKLVKICEKNC---PNTFHI-ETADELDLE-ML---KDYKIIGITAGASTPDWII 271 (281)
T ss_pred HHHHHHHHHHHC---CCEEEE-CChHHCCHH-Hh---CCCCEEEEEccCCCCHHHH
Confidence 334455555443 234666 566777777 66 7889999999988877653
No 267
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=33.97 E-value=1.8e+02 Score=24.89 Aligned_cols=48 Identities=21% Similarity=0.317 Sum_probs=34.3
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHH---HHHHHHHhcCCCCCCceEEcC
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRF---ADALLRELAGVTIPPDRIYGL 136 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~---~~~iL~~~~gl~~~Fd~I~g~ 136 (218)
....||..|+|+ +++.++=.|||...++ +..-|.+ +|++-.-+.|+++
T Consensus 22 ~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~r-lgf~v~eeei~ts 75 (262)
T KOG3040|consen 22 DAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQR-LGFDVSEEEIFTS 75 (262)
T ss_pred cccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHH-hCCCccHHHhcCc
Confidence 347899999999 6999999999976654 4445566 6766444445543
No 268
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=33.71 E-value=48 Score=29.15 Aligned_cols=47 Identities=17% Similarity=-0.026 Sum_probs=28.7
Q ss_pred HHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 144 VLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 144 ~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
-|.++..+.+ .++++|+ +..|+..- .= .+...||++-|.++++.+-+
T Consensus 226 kL~eia~~~~---~~t~~Ie-~~~el~~~-~l---~~~~~VGItaGASTP~~ii~ 272 (281)
T PF02401_consen 226 KLAEIAKEHG---KPTYHIE-TADELDPE-WL---KGVKKVGITAGASTPDWIIE 272 (281)
T ss_dssp HHHHHHHHCT---TCEEEES-SGGG--HH-HH---TT-SEEEEEE-TTS-HHHHH
T ss_pred HHHHHHHHhC---CCEEEeC-CccccCHh-Hh---CCCCEEEEEccCCCCHHHHH
Confidence 4555666544 2457885 45688877 65 78889999999988877643
No 269
>PTZ00174 phosphomannomutase; Provisional
Probab=33.59 E-value=87 Score=26.33 Aligned_cols=33 Identities=18% Similarity=0.102 Sum_probs=26.2
Q ss_pred CCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHH
Q 027821 90 FYPGIPDALK---FASSRIYIVTTKQSRFADALLRE 122 (218)
Q Consensus 90 l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~ 122 (218)
+-|...++|+ ++|++++|||+++...+...++.
T Consensus 23 is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 23 ITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 4455677777 89999999999998877766664
No 270
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=33.57 E-value=1.2e+02 Score=26.85 Aligned_cols=48 Identities=8% Similarity=-0.009 Sum_probs=32.8
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccCCceEEEEecCCCCHHHHH
Q 027821 142 VEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELDGWNLYLGDWGYNTQKERE 197 (218)
Q Consensus 142 Pe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l~ 197 (218)
..-|.++..+.+ .++++| .+..|+... .= .|...|||+-|.++++.+-
T Consensus 225 T~kL~~i~~~~~---~~t~~I-e~~~el~~~-~l---~~~~~VGitaGASTP~~li 272 (298)
T PRK01045 225 SNRLREVAEEAG---APAYLI-DDASEIDPE-WF---KGVKTVGVTAGASAPEWLV 272 (298)
T ss_pred HHHHHHHHHHHC---CCEEEE-CChHHCcHH-Hh---cCCCEEEEEecCCCCHHHH
Confidence 334555555543 234666 456778777 66 7899999999999887663
No 271
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=31.90 E-value=4.2e+02 Score=24.58 Aligned_cols=87 Identities=8% Similarity=-0.113 Sum_probs=54.1
Q ss_pred hCCCcEEEEcCC---------ChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHH
Q 027821 100 FASSRIYIVTTK---------QSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLK 170 (218)
Q Consensus 100 ~~g~~laIvTnk---------~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~ 170 (218)
++|+++..++.. +...+..+.++ +.-..... ++..+ ..|.-+..+.... . ++||=+.+-+.
T Consensus 271 ~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~-~~~~~~~~-vi~~~--~~~~e~~~iIs~~----d--l~ig~RlHa~I 340 (426)
T PRK10017 271 DEGYQVIALSTCTGIDSYNKDDRMVALNLRQH-VSDPARYH-VVMDE--LNDLEMGKILGAC----E--LTVGTRLHSAI 340 (426)
T ss_pred HCCCeEEEEecccCccCCCCchHHHHHHHHHh-ccccccee-EecCC--CChHHHHHHHhhC----C--EEEEecchHHH
Confidence 679998888853 23345566666 54211111 22222 1233333444433 3 79999999999
Q ss_pred HhhccCccCCceEEEEecCCCCHHHHHhcc
Q 027821 171 NVIKEPELDGWNLYLGDWGYNTQKEREEAA 200 (218)
Q Consensus 171 aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~ 200 (218)
.| -. +|++++++.|.......+...+
T Consensus 341 ~a-~~---~gvP~i~i~Y~~K~~~~~~~lg 366 (426)
T PRK10017 341 IS-MN---FGTPAIAINYEHKSAGIMQQLG 366 (426)
T ss_pred HH-HH---cCCCEEEeeehHHHHHHHHHcC
Confidence 99 88 9999999999765555565554
No 272
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=31.80 E-value=98 Score=27.70 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=48.9
Q ss_pred CCc-EEEEcCCC--hHHHHHHHHHhcCCCCCCceEEcCCCCChHH----H---HHHHHhcCCCCCCcEEEEcCChhhHHH
Q 027821 102 SSR-IYIVTTKQ--SRFADALLRELAGVTIPPDRIYGLGTGPKVE----V---LKQLQKKPELQGMTLHFVEDRLATLKN 171 (218)
Q Consensus 102 g~~-laIvTnk~--~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe----~---l~~l~~~~~~~~~e~l~IGDs~~Di~a 171 (218)
++. ..|+|+.+ .++...+.+. +++ ...+.....+...... + +..+..+. ++.=+++.||+..-+.+
T Consensus 8 ~~~~~li~tG~H~~~~~g~~~~~~-f~i-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~Pd~Vlv~GD~~~~la~ 83 (346)
T PF02350_consen 8 GFELILIVTGQHLDPEMGDTFFEG-FGI-PKPDYLLDSDSQSMAKSTGLAIIELADVLERE--KPDAVLVLGDRNEALAA 83 (346)
T ss_dssp TEEEEEEEECSS--CHHHHHHHHH-TT---SEEEE--STTS-HHHHHHHHHHHHHHHHHHH--T-SEEEEETTSHHHHHH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHhh-CCC-CCCCcccccccchHHHHHHHHHHHHHHHHHhc--CCCEEEEEcCCchHHHH
Confidence 444 45677887 7888888888 998 7788777766432222 2 24444443 45667999999976665
Q ss_pred hhccCccCCceEEEEecC
Q 027821 172 VIKEPELDGWNLYLGDWG 189 (218)
Q Consensus 172 A~k~~~~AGv~~i~V~~G 189 (218)
| -++-..+++++-+--|
T Consensus 84 a-laA~~~~ipv~HieaG 100 (346)
T PF02350_consen 84 A-LAAFYLNIPVAHIEAG 100 (346)
T ss_dssp H-HHHHHTT-EEEEES--
T ss_pred H-HHHHHhCCCEEEecCC
Confidence 4 3333389999988777
No 273
>cd01481 vWA_collagen_alpha3-VI-like VWA_collagen alpha 3(VI) like: The extracellular matrix represents a complex alloy of variable members of diverse protein families defining structural integrity and various physiological functions. The most abundant family is the collagens with more than 20 different collagen types identified thus far. Collagens are centrally involved in the formation of fibrillar and microfibrillar networks of the extracellular matrix, basement membranes as well as other structures of the extracellular matrix. Some collagens have about 15-18 vWA domains in them. The VWA domains present in these collagens mediate protein-protein interactions.
Probab=31.48 E-value=77 Score=25.02 Aligned_cols=34 Identities=15% Similarity=0.035 Sum_probs=27.0
Q ss_pred HHhhccCccCCceEEEEecCCCCHHHHHhccCCCCeEE
Q 027821 170 KNVIKEPELDGWNLYLGDWGYNTQKEREEAASIPRIQL 207 (218)
Q Consensus 170 ~aA~k~~~~AGv~~i~V~~G~~~~~~l~~a~~~p~~~~ 207 (218)
+.+ |+ +|+..++|.-|..+.++|.....+|++++
T Consensus 127 ~~l-r~---~gv~i~~vG~~~~~~~eL~~ias~p~~vf 160 (165)
T cd01481 127 VAL-KR---AGIVPFAIGARNADLAELQQIAFDPSFVF 160 (165)
T ss_pred HHH-HH---CCcEEEEEeCCcCCHHHHHHHhCCCccEE
Confidence 445 77 89999999888667888888888888765
No 274
>cd07187 YvcK_like family of mostly uncharacterized proteins similar to B.subtilis YvcK. One member of this protein family, YvcK from Bacillus subtilis, has been proposed to play a role in carbon metabolism, since its function is essential for growth on intermediates of the Krebs cycle and the pentose phosphate pathway. In general, this family of mostly uncharacterized proteins is related to the CofD-like protein family. CofD has been characterized as a 2-phospho-L-lactate transferase involved in F420 biosynthesis. This family appears to have the same conserved phosphate binding site as the other family in this hierarchy, but a different substrate binding site.
Probab=29.97 E-value=4e+02 Score=23.71 Aligned_cols=83 Identities=22% Similarity=0.253 Sum_probs=54.4
Q ss_pred CCCCChHHHHH-hCCCcEEEEcC----------CChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCC
Q 027821 89 RFYPGIPDALK-FASSRIYIVTT----------KQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 89 ~l~pGv~e~L~-~~g~~laIvTn----------k~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
-+.||+.++|+ ....+++|+-. +-.+.++.+.++ +| ...+|.|+.....+.++.+.+. .+.. .
T Consensus 194 Llv~gI~eAi~~s~a~kV~v~N~~~~~get~~~~~~d~v~~i~~~-~~-~~~~d~vlv~~~~~~~~~~~~y-~~~~-~-- 267 (308)
T cd07187 194 LLVKGIAEAIRASKAPKVYICNLMTQPGETDGFTLSDHVRALLRH-LG-EGLLDVVLVNSERPPEEVLRRY-EEGS-L-- 267 (308)
T ss_pred cCchhHHHHHHhCCCCEEEEecCCCCCCCCCCCCHHHHHHHHHHH-hC-CCCCCEEEECCCCCchHHhhhh-hhcC-C--
Confidence 46799999999 66666666532 123678888888 76 4679998887755445666554 2211 1
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
.-..|.+.. ++ .|+.++...
T Consensus 268 ------~v~~d~~~~-~~---~g~~~i~~~ 287 (308)
T cd07187 268 ------PVELDEELL-EK---LGIRVIEAD 287 (308)
T ss_pred ------CcccCHHHH-Hh---CCCEEEEec
Confidence 223367777 76 888888764
No 275
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=29.78 E-value=1.3e+02 Score=26.85 Aligned_cols=32 Identities=19% Similarity=0.421 Sum_probs=24.9
Q ss_pred CCCCCChHHHHH---hCCCcEEEEcCCChHHHHHHHHH
Q 027821 88 NRFYPGIPDALK---FASSRIYIVTTKQSRFADALLRE 122 (218)
Q Consensus 88 ~~l~pGv~e~L~---~~g~~laIvTnk~~~~~~~iL~~ 122 (218)
..++|.+.++++ ++|+.++|.||.... ..+++
T Consensus 141 PlL~p~l~eli~~~k~~Gi~~~L~TNG~~~---e~l~~ 175 (322)
T PRK13762 141 PTLYPYLPELIEEFHKRGFTTFLVTNGTRP---DVLEK 175 (322)
T ss_pred ccchhhHHHHHHHHHHcCCCEEEECCCCCH---HHHHH
Confidence 346788999999 789999999998653 44555
No 276
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=29.10 E-value=61 Score=28.13 Aligned_cols=81 Identities=6% Similarity=0.089 Sum_probs=44.9
Q ss_pred hCCCcEEEEcCCCh---HHHHHHHHHhc-CCCCCCceEEcCC-CCChHHHHHHHHhcCCCCCCcEEEEcCChh--hHHHh
Q 027821 100 FASSRIYIVTTKQS---RFADALLRELA-GVTIPPDRIYGLG-TGPKVEVLKQLQKKPELQGMTLHFVEDRLA--TLKNV 172 (218)
Q Consensus 100 ~~g~~laIvTnk~~---~~~~~iL~~~~-gl~~~Fd~I~g~d-~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~--Di~aA 172 (218)
+.++..-++|+... +.++....+.+ .++.-|-.++|.+ ..|-|...+.++...++++ ++|||.+. +-++-
T Consensus 28 RedI~vrv~gsGaKm~pe~~e~~~~~~~~~~~pdf~I~isPN~~~PGP~~ARE~l~~~~iP~---IvI~D~p~~k~kd~l 104 (276)
T PF01993_consen 28 REDIDVRVVGSGAKMGPEDVEEVVTKMLKEWDPDFVIVISPNAAAPGPTKAREMLSAKGIPC---IVISDAPTKKAKDAL 104 (276)
T ss_dssp -SSEEEEEEEEET--SHHHHHHHHHHHHHHH--SEEEEE-S-TTSHHHHHHHHHHHHSSS-E---EEEEEGGGGGGHHHH
T ss_pred cCCceEEEeccCCCCCHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcHHHHHHHHhCCCCE---EEEcCCCchhhHHHH
Confidence 56888889887543 22333332201 3343355555655 3477888888888877665 89999873 22233
Q ss_pred hccCccCCceEEEEe
Q 027821 173 IKEPELDGWNLYLGD 187 (218)
Q Consensus 173 ~k~~~~AGv~~i~V~ 187 (218)
++ .|.-.|-+.
T Consensus 105 -~~---~g~GYIivk 115 (276)
T PF01993_consen 105 -EE---EGFGYIIVK 115 (276)
T ss_dssp -HH---TT-EEEEET
T ss_pred -Hh---cCCcEEEEe
Confidence 55 787776663
No 277
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=28.52 E-value=73 Score=27.02 Aligned_cols=36 Identities=25% Similarity=0.138 Sum_probs=27.6
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCC
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
+.++.++++|++..+.+..+++. .++- .+|+++|+-
T Consensus 33 ~~~~~~v~~TGRs~~~~~~~~~~-~~l~-~Pd~~I~sv 68 (247)
T PF05116_consen 33 RPEILFVYVTGRSLESVLRLLRE-YNLP-QPDYIITSV 68 (247)
T ss_dssp CCGEEEEEE-SS-HHHHHHHHHH-CT-E-E-SEEEETT
T ss_pred CCCceEEEECCCCHHHHHHHHHh-CCCC-CCCEEEecC
Confidence 67889999999999999999999 8874 578888763
No 278
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=26.74 E-value=1.3e+02 Score=21.59 Aligned_cols=56 Identities=11% Similarity=0.119 Sum_probs=29.8
Q ss_pred HHHHHHHHHhcCCCCCCceE-EcCCCCChHHHHHHHHh--cCCCCCCcEEEEcCChh----hHHHhhcc
Q 027821 114 RFADALLRELAGVTIPPDRI-YGLGTGPKVEVLKQLQK--KPELQGMTLHFVEDRLA----TLKNVIKE 175 (218)
Q Consensus 114 ~~~~~iL~~~~gl~~~Fd~I-~g~d~kpkPe~l~~l~~--~~~~~~~e~l~IGDs~~----Di~aA~k~ 175 (218)
..+..+|+. .|+. |+.| ++.+..-..++.+.... .....|. +||||... |+.++ .+
T Consensus 20 ~~v~~lL~~-k~I~--f~eiDI~~d~~~r~em~~~~~~~~g~~tvPQ--IFi~~~~iGg~ddl~~l-~e 82 (92)
T cd03030 20 QEVLGFLEA-KKIE--FEEVDISMNEENRQWMRENVPNENGKPLPPQ--IFNGDEYCGDYEAFFEA-KE 82 (92)
T ss_pred HHHHHHHHH-CCCc--eEEEecCCCHHHHHHHHHhcCCCCCCCCCCE--EEECCEEeeCHHHHHHH-Hh
Confidence 456678998 8886 6655 44442233344444432 1112233 78877653 56666 54
No 279
>TIGR01826 CofD_related conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam model pfam01933.
Probab=25.97 E-value=4.8e+02 Score=23.30 Aligned_cols=84 Identities=19% Similarity=0.254 Sum_probs=50.0
Q ss_pred CCCCChHHHHH-hCCCcEEEEcC--CC--------hHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCC
Q 027821 89 RFYPGIPDALK-FASSRIYIVTT--KQ--------SRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGM 157 (218)
Q Consensus 89 ~l~pGv~e~L~-~~g~~laIvTn--k~--------~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~ 157 (218)
-+.+||.++|+ .+.-+++|+-- .+ .+.++.+.++ +|- ..+|.|+.....+.++.+.+...+-. .+
T Consensus 191 Llv~gI~eAI~~s~a~kV~v~N~~tq~gEt~g~~~~dhv~~i~~~-~g~-~~~D~vlvn~~~~~~~~~~~y~~~~~-~p- 266 (310)
T TIGR01826 191 LLVPEIAEALRESKAPKVYVCNLMTQPGETDGFSLEDHVDALHRH-LGK-PFIDTVLVNTEKVPLEVLRNYFEEGS-EQ- 266 (310)
T ss_pred cCchhHHHHHHhCCCCEEEEeCCCCCCCCCCCCCHHHHHHHHHHH-cCC-CCCCEEEECCCCCChHHHHHHHhccC-Cc-
Confidence 46799999999 54455555532 12 2678888888 764 46899987664443455544333222 23
Q ss_pred cEEEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 158 TLHFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 158 e~l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
+.+ |.+.- ++ .|++++...
T Consensus 267 --v~~-----d~~~~-~~---~g~~vi~~~ 285 (310)
T TIGR01826 267 --VEH-----DAEGL-QK---LGIEVIFED 285 (310)
T ss_pred --ccc-----cHHHH-Hh---CCCEEEecc
Confidence 222 34444 55 788877653
No 280
>PLN02151 trehalose-phosphatase
Probab=25.66 E-value=87 Score=28.50 Aligned_cols=69 Identities=14% Similarity=0.065 Sum_probs=39.1
Q ss_pred ChHHHHHHHHhcCCCCCC---cEEEEcCChhhHHHhhccC-cc-CCceEEEEecCCCCHHHHHhccCCCCeEEcChhHHH
Q 027821 140 PKVEVLKQLQKKPELQGM---TLHFVEDRLATLKNVIKEP-EL-DGWNLYLGDWGYNTQKEREEAASIPRIQLLQLSDFS 214 (218)
Q Consensus 140 pkPe~l~~l~~~~~~~~~---e~l~IGDs~~Di~aA~k~~-~~-AGv~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~ 214 (218)
.|-..++.++..++.... -.+||||-.+|-.+= +.- .. .|+ .|.| |.... .-.+. |.+.+++++.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF-~~L~~~~~G~-gI~V--g~~~k----~T~A~--y~L~dp~eV~ 338 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAF-KILRDKKQGL-GILV--SKYAK----ETNAS--YSLQEPDEVM 338 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHH-HHHhhcCCCc-cEEe--ccCCC----CCcce--EeCCCHHHHH
Confidence 456667777776543211 269999999986654 320 00 232 2333 22121 11345 8899999988
Q ss_pred hhcC
Q 027821 215 RKLK 218 (218)
Q Consensus 215 ~~~~ 218 (218)
.+|+
T Consensus 339 ~~L~ 342 (354)
T PLN02151 339 EFLE 342 (354)
T ss_pred HHHH
Confidence 8763
No 281
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=25.62 E-value=3.7e+02 Score=21.91 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=29.1
Q ss_pred CcEEEEcCChhhHH------HhhccCccCCceEEEEecCCCCHHHHHh
Q 027821 157 MTLHFVEDRLATLK------NVIKEPELDGWNLYLGDWGYNTQKEREE 198 (218)
Q Consensus 157 ~e~l~IGDs~~Di~------aA~k~~~~AGv~~i~V~~G~~~~~~l~~ 198 (218)
.+.+..||...|.+ .| .+ +|+.++.-.|+..+.+-+++
T Consensus 89 ~~~vv~G~i~sd~~~~~~e~~~-~~---~gl~~~~PLW~~~~~~ll~e 132 (194)
T cd01994 89 VDAVVFGAILSEYQRTRVERVC-ER---LGLEPLAPLWGRDQEELLRE 132 (194)
T ss_pred CCEEEECccccHHHHHHHHHHH-HH---cCCEEEecccCCCHHHHHHH
Confidence 45589999987754 45 66 89999999999877765554
No 282
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=25.40 E-value=1e+02 Score=24.53 Aligned_cols=87 Identities=14% Similarity=0.035 Sum_probs=44.9
Q ss_pred CCCChHHHHH------hCCCcEEEEcCCChHH-HHHHHHHhcCCCCCCceEEcCCCCCh-HHHHHHHHhcCCCCCCcEEE
Q 027821 90 FYPGIPDALK------FASSRIYIVTTKQSRF-ADALLRELAGVTIPPDRIYGLGTGPK-VEVLKQLQKKPELQGMTLHF 161 (218)
Q Consensus 90 l~pGv~e~L~------~~g~~laIvTnk~~~~-~~~iL~~~~gl~~~Fd~I~g~d~kpk-Pe~l~~l~~~~~~~~~e~l~ 161 (218)
.-....|+|+ ..+-++++++..+.-. +..+-+- +|++ +... ..+.... ...+.++.. .+.+ ++
T Consensus 59 I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~l-l~~~--i~~~-~~~~~~e~~~~i~~~~~-~G~~----vi 129 (176)
T PF06506_consen 59 IPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEEL-LGVD--IKIY-PYDSEEEIEAAIKQAKA-EGVD----VI 129 (176)
T ss_dssp E---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHH-HT-E--EEEE-EESSHHHHHHHHHHHHH-TT------EE
T ss_pred ECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHH-hCCc--eEEE-EECCHHHHHHHHHHHHH-cCCc----EE
Confidence 3344455554 5677899998665543 4444454 6663 2211 1111111 122333333 2333 69
Q ss_pred EcCChhhHHHhhccCccCCceEEEEecCC
Q 027821 162 VEDRLATLKNVIKEPELDGWNLYLGDWGY 190 (218)
Q Consensus 162 IGDs~~Di~aA~k~~~~AGv~~i~V~~G~ 190 (218)
||+... .+.| ++ .|++++.+..|.
T Consensus 130 VGg~~~-~~~A-~~---~gl~~v~i~sg~ 153 (176)
T PF06506_consen 130 VGGGVV-CRLA-RK---LGLPGVLIESGE 153 (176)
T ss_dssp EESHHH-HHHH-HH---TTSEEEESS--H
T ss_pred ECCHHH-HHHH-HH---cCCcEEEEEecH
Confidence 999975 7888 77 999999987664
No 283
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=24.87 E-value=3.2e+02 Score=26.32 Aligned_cols=76 Identities=13% Similarity=0.030 Sum_probs=41.5
Q ss_pred hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHHHHhcCCCCCCcEEEEcCChhhHHHhhccCccC
Q 027821 100 FASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQLQKKPELQGMTLHFVEDRLATLKNVIKEPELD 179 (218)
Q Consensus 100 ~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~aA~k~~~~A 179 (218)
+.+-+++||+-...-..-..+..++++. ++.+.-.+..--...+..+.. .+.+ ++|||... .+.| +. +
T Consensus 105 ~~~~~iavv~~~~~~~~~~~~~~~l~~~--i~~~~~~~~~e~~~~v~~lk~-~G~~----~vvG~~~~-~~~A-~~---~ 172 (538)
T PRK15424 105 KLTSSIGVVTYQETIPALVAFQKTFNLR--IEQRSYVTEEDARGQINELKA-NGIE----AVVGAGLI-TDLA-EE---A 172 (538)
T ss_pred hcCCcEEEEecCcccHHHHHHHHHhCCc--eEEEEecCHHHHHHHHHHHHH-CCCC----EEEcCchH-HHHH-HH---h
Confidence 5566888888655433333333336654 222211111111233444443 3433 59999877 7888 77 8
Q ss_pred CceEEEEe
Q 027821 180 GWNLYLGD 187 (218)
Q Consensus 180 Gv~~i~V~ 187 (218)
|+..+.+.
T Consensus 173 g~~g~~~~ 180 (538)
T PRK15424 173 GMTGIFIY 180 (538)
T ss_pred CCceEEec
Confidence 99888775
No 284
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=24.85 E-value=1.6e+02 Score=27.05 Aligned_cols=41 Identities=17% Similarity=0.036 Sum_probs=31.4
Q ss_pred CCChHHHHH--hCCCcEEEEcCCChHHHHHHHHHhcCCCCCCce
Q 027821 91 YPGIPDALK--FASSRIYIVTTKQSRFADALLRELAGVTIPPDR 132 (218)
Q Consensus 91 ~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~ 132 (218)
-|||.-+|. ..-+.++|+|+...-++..+++. ++-..|+..
T Consensus 216 RPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~-lDP~g~IsY 258 (393)
T KOG2832|consen 216 RPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDA-LDPKGYISY 258 (393)
T ss_pred CchHHHHHHhhcccceEEEEecCCccchhhhHhh-cCCcceEEE
Confidence 377777777 77788888888888888888887 776666654
No 285
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=24.31 E-value=4.9e+02 Score=23.18 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=32.3
Q ss_pred EEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHH--HHHHHHhcCCCCCCcEEEEcCChhhH
Q 027821 106 YIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVE--VLKQLQKKPELQGMTLHFVEDRLATL 169 (218)
Q Consensus 106 aIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe--~l~~l~~~~~~~~~e~l~IGDs~~Di 169 (218)
.|.|-+....+..+|+++..-...|.++++-.+ |.-+ .+.+.+.+.++++ .+|=||....
T Consensus 122 ~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESR-P~~eG~~~ak~L~~~gI~~---~~I~Dsa~~~ 183 (301)
T COG1184 122 VILTHSFSKTVLEVLKTAADRGKRFKVIVTESR-PRGEGRIMAKELRQSGIPV---TVIVDSAVGA 183 (301)
T ss_pred EEEEecCcHHHHHHHHHhhhcCCceEEEEEcCC-CcchHHHHHHHHHHcCCce---EEEechHHHH
Confidence 466666666677777663444555776665442 3322 3344455554333 5666665443
No 286
>PLN02580 trehalose-phosphatase
Probab=23.85 E-value=76 Score=29.21 Aligned_cols=35 Identities=11% Similarity=0.015 Sum_probs=28.3
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHH
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRE 122 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~ 122 (218)
..+-|++.++|+ .+..+++|+|+++.+.++..+.-
T Consensus 140 A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred ccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 355678899999 55578999999999988887764
No 287
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=23.40 E-value=55 Score=22.18 Aligned_cols=23 Identities=35% Similarity=0.358 Sum_probs=14.3
Q ss_pred HHHHhcCCCCCCcEEEEcCChhhHHHh
Q 027821 146 KQLQKKPELQGMTLHFVEDRLATLKNV 172 (218)
Q Consensus 146 ~~l~~~~~~~~~e~l~IGDs~~Di~aA 172 (218)
+++++++++ - +|+||+..|++..
T Consensus 8 qQLLK~fG~-~---IY~gdr~~DielM 30 (62)
T PF06014_consen 8 QQLLKKFGI-I---IYVGDRLWDIELM 30 (62)
T ss_dssp HHHHHTTS---------S-HHHHHHHH
T ss_pred HHHHHHCCE-E---EEeCChHHHHHHH
Confidence 677888873 2 7999999999876
No 288
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=23.09 E-value=3.6e+02 Score=23.48 Aligned_cols=65 Identities=18% Similarity=0.329 Sum_probs=42.4
Q ss_pred CHHHHHHHHHHHHHHHHhcccccccccCCCCCC---hHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCC
Q 027821 61 NRDALVDLFGKVRDEWMDKDLTTWIGANRFYPG---IPDALKFASSRIYIVTTKQSRFADALLRELAGVT 127 (218)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pG---v~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~ 127 (218)
++++.++......+.|.-. .-.+.......|| ++|+|++.|++..|+|-.+......-|+. .|+.
T Consensus 44 ~pe~~~~~~~~~~~~~~pD-f~i~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K~~d~l~~-~g~G 111 (277)
T PRK00994 44 GPEEVEEVVKKMLEEWKPD-FVIVISPNPAAPGPKKAREILKAAGIPCIVIGDAPGKKVKDAMEE-QGLG 111 (277)
T ss_pred CHHHHHHHHHHHHHhhCCC-EEEEECCCCCCCCchHHHHHHHhcCCCEEEEcCCCccchHHHHHh-cCCc
Confidence 4555554454554455211 1112333334454 78888899999999999998888889998 8865
No 289
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=22.31 E-value=95 Score=26.30 Aligned_cols=48 Identities=15% Similarity=0.188 Sum_probs=37.8
Q ss_pred CCCCChH-HHHH---hCCCcEEEEcCCChH-----HHHHHHHHhcCCCCCCceEEcCC
Q 027821 89 RFYPGIP-DALK---FASSRIYIVTTKQSR-----FADALLRELAGVTIPPDRIYGLG 137 (218)
Q Consensus 89 ~l~pGv~-e~L~---~~g~~laIvTnk~~~-----~~~~iL~~~~gl~~~Fd~I~g~d 137 (218)
.+.|.+. ++.+ ++|++-.|+.+...+ .++..++. +|+.-.|..++|+-
T Consensus 59 ~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~-~gi~~~~P~~~CsL 115 (217)
T PF02593_consen 59 GLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEE-FGIEVEFPKPFCSL 115 (217)
T ss_pred ccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHh-cCceeecCcccccc
Confidence 4667666 3333 699999999987777 89999999 99998888887764
No 290
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=22.02 E-value=5.7e+02 Score=22.82 Aligned_cols=24 Identities=4% Similarity=-0.108 Sum_probs=21.1
Q ss_pred EEEcCChhhHHHhhccCccCCceEEEEe
Q 027821 160 HFVEDRLATLKNVIKEPELDGWNLYLGD 187 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~~~~AGv~~i~V~ 187 (218)
++||||...++-| -. .|++++.+.
T Consensus 284 ~vitdSSggi~EA-~~---lg~Pvv~l~ 307 (365)
T TIGR03568 284 AVIGNSSSGIIEA-PS---FGVPTINIG 307 (365)
T ss_pred EEEEcChhHHHhh-hh---cCCCEEeec
Confidence 6999999999988 88 999999774
No 291
>PLN03017 trehalose-phosphatase
Probab=21.92 E-value=1.4e+02 Score=27.28 Aligned_cols=68 Identities=12% Similarity=-0.062 Sum_probs=0.0
Q ss_pred hHHHHHHHHhcCCCC---CCcEEEEcCChhhHHHhhccCccCCc--eEEEEecCCCCHHHHHhccCCCCeEEcChhHHHh
Q 027821 141 KVEVLKQLQKKPELQ---GMTLHFVEDRLATLKNVIKEPELDGW--NLYLGDWGYNTQKEREEAASIPRIQLLQLSDFSR 215 (218)
Q Consensus 141 kPe~l~~l~~~~~~~---~~e~l~IGDs~~Di~aA~k~~~~AGv--~~i~V~~G~~~~~~l~~a~~~p~~~~~~~~~l~~ 215 (218)
|-..++.++..++.. ..-.+||||-.+|-.+= +. ..= ..++|.=|....+ -.+. |.+.++.|+..
T Consensus 284 KG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF-~~---L~~~~~G~gI~VG~~~k~----T~A~--y~L~dp~eV~~ 353 (366)
T PLN03017 284 KGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAF-KM---LRDRGEGFGILVSKFPKD----TDAS--YSLQDPSEVMD 353 (366)
T ss_pred HHHHHHHHHHhcccccCCCceEEEeCCCCccHHHH-HH---HhhcCCceEEEECCCCCC----Ccce--EeCCCHHHHHH
Q ss_pred hcC
Q 027821 216 KLK 218 (218)
Q Consensus 216 ~~~ 218 (218)
+|+
T Consensus 354 fL~ 356 (366)
T PLN03017 354 FLA 356 (366)
T ss_pred HHH
No 292
>PLN02151 trehalose-phosphatase
Probab=21.48 E-value=87 Score=28.51 Aligned_cols=35 Identities=6% Similarity=0.047 Sum_probs=28.6
Q ss_pred CCCCCChHHHHH--hCCCcEEEEcCCChHHHHHHHHH
Q 027821 88 NRFYPGIPDALK--FASSRIYIVTTKQSRFADALLRE 122 (218)
Q Consensus 88 ~~l~pGv~e~L~--~~g~~laIvTnk~~~~~~~iL~~ 122 (218)
..+-|++.++|+ .++.+++|+|+++...+...+.-
T Consensus 119 A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~ 155 (354)
T PLN02151 119 AFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKL 155 (354)
T ss_pred ccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcCC
Confidence 356678888999 77789999999999888777653
No 293
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=21.36 E-value=2.3e+02 Score=26.56 Aligned_cols=15 Identities=20% Similarity=0.357 Sum_probs=10.4
Q ss_pred EEEcCChhhHHHhhcc
Q 027821 160 HFVEDRLATLKNVIKE 175 (218)
Q Consensus 160 l~IGDs~~Di~aA~k~ 175 (218)
.||+|.. |++.|.++
T Consensus 217 ~~vd~~~-d~~ia~~R 231 (477)
T KOG2456|consen 217 CYVDKNC-DLKIAARR 231 (477)
T ss_pred eeecCCc-CHHHHHHH
Confidence 4887766 88877454
No 294
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=20.55 E-value=2.6e+02 Score=23.32 Aligned_cols=66 Identities=15% Similarity=-0.084 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHHHHh--cccccccccCCCCCC-hHHHHH---hCCCcEEEEcCC--ChHHHHHHHHHhcCC
Q 027821 60 ENRDALVDLFGKVRDEWMD--KDLTTWIGANRFYPG-IPDALK---FASSRIYIVTTK--QSRFADALLRELAGV 126 (218)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~pG-v~e~L~---~~g~~laIvTnk--~~~~~~~iL~~~~gl 126 (218)
.+.+++.+...+.+.+|.. ..-..--....+++. +.++++ +.|+.++|.||. +.+..+.++.. .++
T Consensus 19 ~t~eel~~~~~~~~~f~~~sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~~-~D~ 92 (213)
T PRK10076 19 ITLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKL-CDE 92 (213)
T ss_pred cCHHHHHHHHHhhhHhhcCCCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHh-cCE
No 295
>KOG3217 consensus Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=20.44 E-value=1.8e+02 Score=23.28 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=25.3
Q ss_pred CCCCCChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCCCChHHHHHH
Q 027821 88 NRFYPGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGTGPKVEVLKQ 147 (218)
Q Consensus 88 ~~l~pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~kpkPe~l~~ 147 (218)
-.|=|-....|++.|++ .+...+ .+-.. ++ ..||.|++-|..-.-++.+.
T Consensus 54 ~~PD~R~~s~lK~hGI~---~~H~aR----qit~~--DF-~~FDYI~~MDesN~~dL~~~ 103 (159)
T KOG3217|consen 54 RSPDPRTLSILKKHGIK---IDHLAR----QITTS--DF-REFDYILAMDESNLRDLLRK 103 (159)
T ss_pred CCCChHHHHHHHHcCCc---chhhcc----cccHh--Hh-hhcceeEEecHHHHHHHHHH
Confidence 45556666666677776 222222 22111 22 35899999874233334333
No 296
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=20.39 E-value=2e+02 Score=20.67 Aligned_cols=36 Identities=19% Similarity=0.086 Sum_probs=23.9
Q ss_pred CcEEEE-cCChhhHHHhhccCccCCceEEEEecCCCCHHHH
Q 027821 157 MTLHFV-EDRLATLKNVIKEPELDGWNLYLGDWGYNTQKER 196 (218)
Q Consensus 157 ~e~l~I-GDs~~Di~aA~k~~~~AGv~~i~V~~G~~~~~~l 196 (218)
..++.+ ||+..=+.+| -. +|+.++-++.|....+..
T Consensus 41 ~~lvIt~gdR~di~~~a-~~---~~i~~iIltg~~~~~~~v 77 (105)
T PF07085_consen 41 GDLVITPGDREDIQLAA-IE---AGIACIILTGGLEPSEEV 77 (105)
T ss_dssp TEEEEEETT-HHHHHHH-CC---TTECEEEEETT----HHH
T ss_pred CeEEEEeCCcHHHHHHH-HH---hCCCEEEEeCCCCCCHHH
Confidence 455777 9997777777 87 999999888887665554
No 297
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=20.27 E-value=2.1e+02 Score=21.36 Aligned_cols=85 Identities=19% Similarity=0.126 Sum_probs=50.3
Q ss_pred CChHHHHHhCCCcEEEEcCCChHHHHHHHHHhcCCCCCCceEEcCCC-CChHHHHHHHHhcCCCCCCcEEEEcCChhhHH
Q 027821 92 PGIPDALKFASSRIYIVTTKQSRFADALLRELAGVTIPPDRIYGLGT-GPKVEVLKQLQKKPELQGMTLHFVEDRLATLK 170 (218)
Q Consensus 92 pGv~e~L~~~g~~laIvTnk~~~~~~~iL~~~~gl~~~Fd~I~g~d~-kpkPe~l~~l~~~~~~~~~e~l~IGDs~~Di~ 170 (218)
+...+.|++ |+.+-+....+.+.+...++. +|++++... +-.++.+..+ ++++...+.-+|=-..|+.
T Consensus 9 ~~~~~~l~~-~~~v~~~~~~~~~~~~~~l~~-------~d~ii~~~~~~~~~~~l~~~---~~Lk~I~~~~~G~d~id~~ 77 (133)
T PF00389_consen 9 DEEIERLEE-GFEVEFCDSPSEEELAERLKD-------ADAIIVGSGTPLTAEVLEAA---PNLKLISTAGAGVDNIDLE 77 (133)
T ss_dssp HHHHHHHHH-TSEEEEESSSSHHHHHHHHTT-------ESEEEESTTSTBSHHHHHHH---TT-SEEEESSSSCTTB-HH
T ss_pred HHHHHHHHC-CceEEEeCCCCHHHHHHHhCC-------CeEEEEcCCCCcCHHHHhcc---ceeEEEEEcccccCcccHH
Confidence 344555545 777777776676655555554 788877653 3557777666 2223222223343346999
Q ss_pred HhhccCccCCceEEEEecCCCC
Q 027821 171 NVIKEPELDGWNLYLGDWGYNT 192 (218)
Q Consensus 171 aA~k~~~~AGv~~i~V~~G~~~ 192 (218)
+| ++ .|+.+.-+. |+++
T Consensus 78 ~a-~~---~gI~V~n~~-g~~~ 94 (133)
T PF00389_consen 78 AA-KE---RGIPVTNVP-GYNA 94 (133)
T ss_dssp HH-HH---TTSEEEE-T-TTTH
T ss_pred HH-hh---CeEEEEEeC-CcCC
Confidence 99 88 899887774 4444
Done!