BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027823
(218 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana
GN=At2g38610 PE=1 SV=1
Length = 286
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/220 (89%), Positives = 205/220 (93%), Gaps = 4/220 (1%)
Query: 1 MMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAP 60
MM NQGFGDFDRLRHRSPSPMASSNLMSNV+ TGLGGWNGL QERL G PGMTMDWQ AP
Sbjct: 67 MMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQERLSGTPGMTMDWQGAP 126
Query: 61 ASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 120
SPSSYTVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVEATTGCRV+IRGKGSIKDP
Sbjct: 127 GSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDP 186
Query: 121 DKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQ 180
+KEDKLRGRPGYEHLN+ LHILIEADLPA+IV+IRLRQAQEIIEELLKPVDESQD+IKRQ
Sbjct: 187 EKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQ 246
Query: 181 QLRELAMLNS-NFREDSPGPS--GSVSPFNSSGMKRAKTG 217
QLRELA+LNS N RE+SPGPS GSVSPFNSSG KR KTG
Sbjct: 247 QLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285
>sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana
GN=At3g08620 PE=2 SV=1
Length = 283
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/218 (86%), Positives = 205/218 (94%)
Query: 1 MMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAP 60
MMPNQGF DFDRLRHRSPSPMAS NLMSNV+G GLGGWNGLP ER+GGP GM M+WQ AP
Sbjct: 66 MMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPERIGGPHGMAMEWQGAP 125
Query: 61 ASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 120
ASPSSY VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP
Sbjct: 126 ASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 185
Query: 121 DKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQ 180
+KE+KL+G+PGYEHLN+ LHILIEADLP +IVDI+LRQAQEIIEEL+KPVDESQDYIKRQ
Sbjct: 186 EKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQ 245
Query: 181 QLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTGR 218
QLRELA+LNSN RE+SPGPSGSVSPFNS+ MKR KTGR
Sbjct: 246 QLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283
>sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica
GN=SPIN1 PE=1 SV=1
Length = 281
Score = 324 bits (831), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/218 (76%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
Query: 1 MMPNQGFGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQERLGGPPGMTMDWQSAP 60
++ N GFGDFDR R RSPSPM+S N SN +G G WNGL QERLG P G +MDWQ AP
Sbjct: 65 IVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQERLGFPQGTSMDWQGAP 124
Query: 61 ASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 120
SPSS+ VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVEA+TGCRV+IRGKGSIKDP
Sbjct: 125 PSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDP 184
Query: 121 DKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQ 180
KEDKLRG+PGYEHL+DPLHILIEA+ PA+I+D RLR AQE+IEELLKPVDESQD+ KRQ
Sbjct: 185 GKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQ 244
Query: 181 QLRELAMLNSNFREDSPGPSGSVSPFNSSGMKRAKTGR 218
QLRELAMLNS REDSP P GSVSPF++ GMKRAKTG+
Sbjct: 245 QLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 14 RHRSPSPMASSNLMSNVAGTGLGGW-NGLPQER-LGGPPGMTMDWQSAPASPSSYTVKRI 71
R PSP+AS + N + + GW + P ER + P +W ++P S S VKR
Sbjct: 105 RFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSPAP--NWLNSPGSSSGLIVKRT 161
Query: 72 LRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPG 131
+R++IPVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KED +RG+PG
Sbjct: 162 IRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPG 221
Query: 132 YEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSN 191
YEHLN+PLHIL+EA+LP IVD RL QA+EI+++LL PV+E+ D+ K+QQLRELA+LN +
Sbjct: 222 YEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGS 281
Query: 192 FREDSPGPSGSVSPFNSSGMKRAKT 216
RE+ SGS+SP+NS GMKRAKT
Sbjct: 282 LREEGSPMSGSISPYNSLGMKRAKT 306
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 239 bits (611), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 121/200 (60%), Positives = 150/200 (75%), Gaps = 3/200 (1%)
Query: 18 PSPMASSNLMSNVAGTGLGGW-NGLPQERLGGPPGMTMDWQSAPASPSSYTVKRILRLEI 76
PSP+AS + N A + GW + P ER P +W ++P S S KR +R++I
Sbjct: 115 PSPLASGGIFQN-ARADMNGWASQFPSER-SVPSSPGPNWLNSPGSSSGLIAKRTIRVDI 172
Query: 77 PVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHLN 136
PVD YPNFNFVGRLLGPRGNSLKRVEA+T CRV IRG+GSIKDP KE+ +RG+PGYEHLN
Sbjct: 173 PVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLN 232
Query: 137 DPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREDS 196
+PLHIL+EA+LP IVD RL QA+EI+++LL P++E+ D K+QQLRELA+LN RE+
Sbjct: 233 EPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEG 292
Query: 197 PGPSGSVSPFNSSGMKRAKT 216
SGSVSP+NS GMKRAKT
Sbjct: 293 SPMSGSVSPYNSLGMKRAKT 312
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/225 (50%), Positives = 146/225 (64%), Gaps = 23/225 (10%)
Query: 7 FGDFDRLRHRSPSPMASSNLMSNVAGTGLGGWNGLPQER---------LGGPPGMTMDWQ 57
F D DR H SP S +N L GW+ + E GP + W
Sbjct: 80 FPDLDRYEHGSP--FRSLGQPTN-GKLDLEGWSMMQAEENCHLQRASPFRGP--SPVGWI 134
Query: 58 SAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSI 117
P P+ VK+++RL++PVD YP++NFVGR+LGPRGNSLKRVE T CRV+IRG+GS+
Sbjct: 135 GMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSV 194
Query: 118 KDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYI 177
KD KE+KL+G+PGYEHL +PLH+LIEA+LP +I++ RL A +E LLKP+DES D+
Sbjct: 195 KDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHY 254
Query: 178 KRQQLRELAMLNSNFREDSPGP------SGSVSPFNSSGMKRAKT 216
KR+QL+ELA LN RE+SP P S S+SPFNS KRAKT
Sbjct: 255 KREQLKELAALNGTLREESPSPSLSPCLSPSMSPFNS---KRAKT 296
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1
Length = 319
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE-DSPGPSGSVSPFNSSGMKRAKTG 217
R+ + P+ + S ++ R TG
Sbjct: 205 RDANIKSPALAFSLAATAQAPRIMTG 230
>sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1
Length = 342
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 86 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 145
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 146 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 205
Query: 193 RE 194
R+
Sbjct: 206 RD 207
>sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2
Length = 341
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1
Length = 341
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1
Length = 341
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1
Length = 341
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1
Length = 341
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1
Length = 341
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1
Length = 341
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2
Length = 340
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +I+L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2
Length = 341
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 92/122 (75%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP+FNFVGR+LGPRG + K++EA TGC++ +RGKGS++D KE++ RG+P +
Sbjct: 86 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNW 145
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + N +++L++A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 146 EHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTY 205
Query: 193 RE 194
R+
Sbjct: 206 RD 207
>sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1
Length = 405
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
++ +PV +P+FNFVGR+LGPRG + K++E TGC++ +RGKGS++D KED RG+P +
Sbjct: 140 KVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNW 199
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHL+D LH+LI + N ++L QA +++LL P E +D +K++QL ELA++N +
Sbjct: 200 EHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTY 259
Query: 193 REDSPGPSGSVS 204
R D+ S +V
Sbjct: 260 R-DTTAKSVAVC 270
>sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis
elegans GN=gld-1 PE=1 SV=1
Length = 463
Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
++ +P + YP++NFVGR+LGPRG + K++E TGC++ +RGKGS++D KE RG+ +
Sbjct: 208 KIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANW 267
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHL D LH+L++ + N V I+L+ A E +++LL P E D +KR+QL ELA++N +
Sbjct: 268 EHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGTY 327
Query: 193 RE-DSPGPS 200
R SP P+
Sbjct: 328 RPMKSPNPA 336
>sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2
Length = 341
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 90/122 (73%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+L +PV YP++NFVGR+LGPRG + K++EA TGC++ +RG+ S++D KE++ RG+P +
Sbjct: 85 KLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNW 144
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
EHLN+ LH+LI + +I++R+A E +++LL P E +D +K+ QL ELA+LN +
Sbjct: 145 EHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTY 204
Query: 193 RE 194
R+
Sbjct: 205 RD 206
>sp|Q5VWX1|KHDR2_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1
Length = 349
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 6/135 (4%)
Query: 64 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE 123
S+ +K R+ IPV YP FNFVG+LLGPRGNSLKR++ TG ++ I GKGS++D KE
Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKE 113
Query: 124 DKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQ 181
++LR G Y HL+D LH+LIE P R+ A E I++ L P + D I+++Q
Sbjct: 114 EELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQ 171
Query: 182 LRELAMLNSNFREDS 196
LREL+ LN + EDS
Sbjct: 172 LRELSYLNGS--EDS 184
>sp|Q920F3|KHDR2_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 64 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE 123
S+ +K R+ IPV YP FNFVG+LLGPRGNSLKR++ TG ++ I GKGS++D KE
Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKE 113
Query: 124 DKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQ 181
++LR G Y HL+D LH+LIE P R+ A E I++ L P + D I+++Q
Sbjct: 114 EELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQ 171
Query: 182 LRELAMLN 189
LREL+ LN
Sbjct: 172 LRELSYLN 179
>sp|Q9WU01|KHDR2_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 112 bits (281), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 64 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE 123
S+ +K R+ IPV YP FNFVG+LLGPRGNSLKR++ TG ++ I GKGS++D KE
Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKE 113
Query: 124 DKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQ 181
++LR G Y HL+D LH+LIE P R+ A E I++ L P + D I+++Q
Sbjct: 114 EELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQ 171
Query: 182 LRELAMLN 189
LREL+ LN
Sbjct: 172 LRELSYLN 179
>sp|Q08BJ2|KHDR2_DANRE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1
Length = 346
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 64 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE 123
S+ +K R+ IPV YP FNFVG+LLGPRGNS+KR++ TG ++ I GKGS++D KE
Sbjct: 54 SNKNIKLSERVLIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKE 113
Query: 124 DKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQ 181
++LR G Y HL++ LH+LIE P R+ A E I++ L P + D I+++Q
Sbjct: 114 EELRKSGEAKYAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQ 171
Query: 182 LRELAMLN 189
LREL+ LN
Sbjct: 172 LRELSYLN 179
>sp|Q0VFL3|KHDR2_XENTR KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1
Length = 345
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 64 SSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKE 123
S+ +K R+ IPV YP FNFVG+LLGPRGNSLKR++ TG ++ I GKGS++D KE
Sbjct: 54 SNKNIKLSERVLIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKE 113
Query: 124 DKLR--GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQ 181
++LR + HL+D LH+L+E P R+ A E I++ L P + D I+++Q
Sbjct: 114 EELRKSDEAKHAHLSDELHVLLEVFAPPGEAYSRMSHALEEIKKFLVP--DYNDEIRQEQ 171
Query: 182 LRELAMLN 189
LREL+ LN
Sbjct: 172 LRELSYLN 179
>sp|Q9R226|KHDR3_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 75/116 (64%), Gaps = 4/116 (3%)
Query: 76 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRPGYE 133
IPV +P FNFVG+LLGPRGNSLKR++ T ++ I GKGS++D KE++LR G Y
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYF 121
Query: 134 HLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLN 189
HLND LH+LIE P R+ A E I++ L P + D I++ QL+EL LN
Sbjct: 122 HLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLN 175
>sp|Q9JLP1|KHDR3_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRP 130
++ IPV +P FNFVG+LLGPRGNSLKR++ T ++ I GKGS++D KE++LR G
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 131 GYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLN 189
Y HLND LH+LIE P R+ A E I++ L P + D I++ QL+EL LN
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP--DYNDEIRQAQLQELTYLN 175
>sp|O75525|KHDR3_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1
Length = 346
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRP 130
++ IPV +P FNFVG+LLGPRGNSLKR++ T ++ I GKGS++D KE++LR G
Sbjct: 59 KVLIPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEA 118
Query: 131 GYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLN 189
Y HLND LH+LIE P R+ A E I++ L P + D I++ QL+EL LN
Sbjct: 119 KYFHLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP--DYNDEIRQAQLQELTYLN 175
>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=BBP PE=3 SV=1
Length = 455
Score = 100 bits (249), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 84/138 (60%), Gaps = 6/138 (4%)
Query: 63 PSSYT--VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 120
PS+Y + + RL +PV YP+ NFVG L+GPRGN+LK+++ +G R+ IRGKGS+K+
Sbjct: 139 PSNYRRPSRTVERLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEG 198
Query: 121 DKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELL-KPVDESQDYIKR 179
D + D LH+LI AD P I ++ EII++L+ P + +++KR
Sbjct: 199 KSSDGFGSSQTGTDIQDDLHVLITADSPLKISKA-VKLVNEIIDKLIFSP--QGMNFMKR 255
Query: 180 QQLRELAMLNSNFREDSP 197
QL+ELA+LN RE P
Sbjct: 256 DQLKELAVLNGTLRETKP 273
>sp|Q91V33|KHDR1_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1
Length = 443
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRP 130
R+ IPV YP FNFVG++LGP+GN++KR++ TG ++ + GKGS++D KE++LR G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 131 GYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLN 189
Y HLN LH+ IE P + A E +++ L P + D I ++Q EL+ LN
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 275
>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
PE=3 SV=1
Length = 501
Score = 97.4 bits (241), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 18/137 (13%)
Query: 63 PSSY---TVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKD 119
PS Y K+ ++ IP+ +P +NF+G ++GPRGN+ KR+E +G ++ IRGKGS +D
Sbjct: 169 PSDYQPPNEKKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRD 228
Query: 120 PDKEDKLRGRPGYEHL--NDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYI 177
G+P ND LH+L+ AD VD +L +A+ ++ E L PV+E ++
Sbjct: 229 --------GKPTKLQFQENDELHVLLTAD----TVD-QLDKAEVLVREFLIPVEEGKNEH 275
Query: 178 KRQQLRELAMLNSNFRE 194
KRQQLRELA +N RE
Sbjct: 276 KRQQLRELAEMNGTLRE 292
>sp|Q60749|KHDR1_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2
Length = 443
Score = 97.1 bits (240), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRP 130
R+ IPV YP FNFVG++LGP+GN++KR++ TG ++ + GKGS++D KE++LR G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 131 GYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLN 189
Y HLN LH+ IE P + A E +++ L P + D I ++Q EL+ LN
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 275
>sp|Q07666|KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1
Length = 443
Score = 97.1 bits (240), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRP 130
R+ IPV YP FNFVG++LGP+GN++KR++ TG ++ + GKGS++D KE++LR G P
Sbjct: 159 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 218
Query: 131 GYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLN 189
Y HLN LH+ IE P + A E +++ L P + D I ++Q EL+ LN
Sbjct: 219 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 275
>sp|Q8UUW7|KHDR1_CHICK KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1
Length = 433
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR--GRP 130
R+ IPV YP FNFVG++LGP+GN++KR++ TG ++ + GKGS++D KE++LR G P
Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 201
Query: 131 GYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLN 189
Y HLN LH+ IE P + A E +++ L P + D I ++Q EL+ LN
Sbjct: 202 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP--DMMDDICQEQFLELSYLN 258
>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
Length = 507
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 6/122 (4%)
Query: 76 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHL 135
IP++ YP NFVG LLGPRGN+LK+++ +GC++ IRG+GS+K+ L G ++
Sbjct: 155 IPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEGKAATDLPK--GAMNM 212
Query: 136 NDPLHILIEADLPANI-VDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFRE 194
N+PLH +I AD I + I ++ II+ + P E Q+ +KR QLRELA+LN RE
Sbjct: 213 NEPLHCVISADTEEKIPLGINAVESI-IIKAITSP--EGQNDLKRGQLRELAVLNGTLRE 269
Query: 195 DS 196
D+
Sbjct: 270 DN 271
>sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP
PE=3 SV=1
Length = 465
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 76 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGYEHL 135
IPV YP NFVG LLGPRG +L++++ +GC++ IRG+GS+K+ L PG
Sbjct: 140 IPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSSDL--PPGAMDF 197
Query: 136 NDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFRED 195
+DPLH LI AD I + +I+ + P E Q+ +KR QLRELA LN RED
Sbjct: 198 SDPLHCLIIADNEEKIENGIKACRNIVIKAVTSP--EGQNELKRGQLRELAELNGTLRED 255
Query: 196 S 196
+
Sbjct: 256 N 256
>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1
Length = 476
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 77/125 (61%), Gaps = 6/125 (4%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
+ IPVD YP+ NFVG LLGPRG +L++++ + C++ IRG+GS+K+ L PG
Sbjct: 151 KYYIPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNASDL--PPGA 208
Query: 133 EHLNDPLHILIEADLPANIVD-IRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSN 191
+ DPLH LI AD I I++ Q +I+ + P E Q+ +KR QLRELA LN
Sbjct: 209 MNFEDPLHCLIIADSEDKIQKGIKVCQ-NIVIKAVTSP--EGQNDLKRGQLRELAELNGT 265
Query: 192 FREDS 196
RED+
Sbjct: 266 LREDN 270
>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
SV=1
Length = 566
Score = 92.0 bits (227), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 85/141 (60%), Gaps = 19/141 (13%)
Query: 63 PSSYT--VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 120
PS Y K ++ +PV+ YP NF+G L+GPRGN+LK++EA +G ++ IRGKGS+K+
Sbjct: 172 PSDYRRPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVKE- 230
Query: 121 DKEDKLRGRPGYEHLN---DPLHILIEADLPANIVDIRLRQAQEIIEELLK---PVDESQ 174
+GR H + + LH LI AD + ++ +A++++ +++ + E Q
Sbjct: 231 -----GKGRSDAAHASNQEEDLHCLIMAD-----TEEKVNKAKKLVHNVIETAASIPEGQ 280
Query: 175 DYIKRQQLRELAMLNSNFRED 195
+ +KR QLRELA LN R+D
Sbjct: 281 NELKRNQLRELAALNGTLRDD 301
>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bpb-1 PE=3 SV=1
Length = 607
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%), Gaps = 19/141 (13%)
Query: 63 PSSYT--VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 120
PS Y K ++ +PV+ YP NF+G L+GPRGN+LK++E +G ++ IRGKGS+K+
Sbjct: 187 PSDYRRPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSVKEG 246
Query: 121 DKEDKLRGRPGYEHLN---DPLHILIEADLPANIVDIRLRQAQEIIEELLK---PVDESQ 174
+GR H + + LH LI AD + ++ +A+++I +++ + E Q
Sbjct: 247 ------KGRSDAAHSSNQEEDLHCLIMAD-----TEEKVNKAKKLIHNIIETAASIPEGQ 295
Query: 175 DYIKRQQLRELAMLNSNFRED 195
+ +KR QLRELA LN R+D
Sbjct: 296 NELKRNQLRELAALNGTLRDD 316
>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bpb1 PE=1 SV=1
Length = 587
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 83/140 (59%), Gaps = 15/140 (10%)
Query: 62 SPSSY--TVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKD 119
+PS Y K ++ +PV YP NF+G L+GPRG++LK +EA +G ++ IRGKGS+
Sbjct: 176 APSDYRRPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSV-- 233
Query: 120 PDKEDKLRGRPGYE-HLNDPLHILIEADLPANIVDIRLRQAQEIIEELLK---PVDESQD 175
KE K R P ++ + LH L+ AD + ++ A ++I+ +++ V E Q+
Sbjct: 234 --KEGKGRSDPSVRGNMEEDLHCLVTAD-----SEDKINHAIKLIDNVIQTAASVPEGQN 286
Query: 176 YIKRQQLRELAMLNSNFRED 195
+KR QLR+LA LN R+D
Sbjct: 287 DLKRNQLRQLATLNGTLRDD 306
>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
Length = 639
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 76/129 (58%), Gaps = 16/129 (12%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
++ IP D YP NFVG L+GPRGN+LK +E ++ IRGKGS+ KE K+ GR
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSV----KEGKV-GRKDG 193
Query: 133 EHL---NDPLHILIEADLPANIVDIRLRQAQEIIEELLK---PVDESQDYIKRQQLRELA 186
+ L ++PLH L+ A+ N+ ++A E I +LK E Q+ +++ QLRELA
Sbjct: 194 QMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRKMQLRELA 248
Query: 187 MLNSNFRED 195
LN RED
Sbjct: 249 RLNGTLRED 257
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 87.4 bits (215), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 76/129 (58%), Gaps = 16/129 (12%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
++ IP D YP NFVG L+GPRGN+LK +E ++ IRGKGS+ KE K+ GR
Sbjct: 139 KVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSV----KEGKV-GRKDG 193
Query: 133 EHL---NDPLHILIEADLPANIVDIRLRQAQEIIEELLK---PVDESQDYIKRQQLRELA 186
+ L ++PLH L+ A+ N+ ++A E I +LK E Q+ +++ QLRELA
Sbjct: 194 QMLPGEDEPLHALVTANTMENV-----KKAVEQIRNILKQGIETPEDQNDLRKMQLRELA 248
Query: 187 MLNSNFRED 195
LN RED
Sbjct: 249 RLNGTLRED 257
>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BBP PE=3 SV=2
Length = 518
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 16/143 (11%)
Query: 68 VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR 127
VK ++ IPV YP+ NFVG LLGPRGN+L++++ +G R+ IRGKGS+KD
Sbjct: 160 VKTYEKIYIPVKDYPDINFVGLLLGPRGNTLRQLQEDSGARLAIRGKGSVKDGKSTSSNN 219
Query: 128 GRPGYEHL------------NDPLHILIEADLPANIVDIRLRQAQEIIEELL-KPVDESQ 174
ND LH++I +D + I ++ ++IE+ + PV Q
Sbjct: 220 DDDDSNSSLSFSNPNLNSSGNDDLHVVITSDSQSKIAKA-IKLTNQVIEKAISSPV--GQ 276
Query: 175 DYIKRQQLRELAMLNSNFREDSP 197
+ +KR QLRELA+LN RE P
Sbjct: 277 NDLKRGQLRELAILNGTLRETKP 299
>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BBP PE=3 SV=1
Length = 605
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 11/123 (8%)
Query: 76 IPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGR---PGY 132
IPV+ YP+ NF+G+LLG RG +LK++E +G ++ IRG+GS+K + +GR P
Sbjct: 185 IPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVK------QGKGRTDIPFQ 238
Query: 133 EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNF 192
D LH LI ++ I ++ Q++I+ V E Q+ +KR QLRELA LN
Sbjct: 239 STAEDDLHCLIISEDEEKIARA-VQLVQQVIDTAAS-VPEGQNELKRSQLRELAALNGTL 296
Query: 193 RED 195
R+D
Sbjct: 297 RDD 299
>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BBP PE=3 SV=1
Length = 546
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
++ IPV +P NF G L+GPRGNSLK++E +G ++ IRGKGS+K+ +GR G
Sbjct: 249 KVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKE------GKGRAGN 302
Query: 133 --EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNS 190
+ D LH LI AD + + + ++IE + D+ KR QLRELA LN
Sbjct: 303 FPQDEEDELHCLITADDESKVKTC-VALINKVIETAASTPEGENDH-KRNQLRELASLNG 360
Query: 191 NFRED 195
R+D
Sbjct: 361 TLRDD 365
>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
Length = 546
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 73 RLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLRGRPGY 132
++ IPV +P NF G L+GPRGNSLK++E +G ++ IRGKGS+K+ +GR G
Sbjct: 249 KVYIPVKEFPEINFFGLLVGPRGNSLKKMERESGAKISIRGKGSVKE------GKGRAGN 302
Query: 133 --EHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNS 190
+ D LH LI AD + + + ++IE + D+ KR QLRELA LN
Sbjct: 303 FPQDEEDELHCLITADDESKVKTC-VALINKVIETAASTPEGENDH-KRNQLRELASLNG 360
Query: 191 NFRED 195
R+D
Sbjct: 361 TLRDD 365
>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
9021) GN=BBP PE=3 SV=1
Length = 625
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
Query: 63 PSSY-TVKRILR----LEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSI 117
PS Y +KR R + +P+ +P F G L+GPRGN+LK +E +G ++ IRGKGS+
Sbjct: 236 PSDYHAIKRNQRPTEKVYLPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSV 295
Query: 118 KDPDKEDKLRGRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYI 177
K +G+ + + +H ++ AD A++ ++ ++IE + D+
Sbjct: 296 K------TGKGKMDADEDEEEMHCVVTADDEASVKKC-IKLINQVIETAASTPEGENDH- 347
Query: 178 KRQQLRELAMLNSNFRED 195
KR QLRELA LN R+D
Sbjct: 348 KRNQLRELAALNGTLRDD 365
>sp|P13230|GRP33_ARTSA Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1
Length = 308
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 68 VKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPDKEDKLR 127
VK + R +PVD +P +NF+G+LLGP G+++K+++ T ++ I G+GS++D +KE++LR
Sbjct: 72 VKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQLQDETMTKISILGRGSMRDRNKEEELR 131
Query: 128 --GRPGYEHLNDPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYI 177
G Y HLN+ LHI I + R+ A I++ + P +E +Y+
Sbjct: 132 NSGDVKYAHLNEQLHIEIISIASPAEAHARMAYALTEIKKYITP-EEDPNYM 182
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 72 LRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKG--SIKDPDKEDKLRG 128
L E+P+ + FVGRL+G G +LK++E TG ++ I SI +P++ +RG
Sbjct: 264 LAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVRG 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,457,662
Number of Sequences: 539616
Number of extensions: 4350371
Number of successful extensions: 10884
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 98
Number of HSP's that attempted gapping in prelim test: 10717
Number of HSP's gapped (non-prelim): 216
length of query: 218
length of database: 191,569,459
effective HSP length: 113
effective length of query: 105
effective length of database: 130,592,851
effective search space: 13712249355
effective search space used: 13712249355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 59 (27.3 bits)