BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027824
(218 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/218 (86%), Positives = 207/218 (94%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGYK D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL ID K
Sbjct: 1 MAGYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVL+QIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
R VEAG N ++S +PSKG+TINVKDDSSVLK+IGCCSN
Sbjct: 181 RTVEAGKNASSSAVPSKGQTINVKDDSSVLKKIGCCSN 218
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/218 (86%), Positives = 208/218 (95%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGYK D+EYDYLFKLV IGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL ID K
Sbjct: 1 MAGYKGDDEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVL+QIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
RAVEAG+N ++S +PSKG+TINVKDDSSVLK+IGCCSN
Sbjct: 181 RAVEAGNNASSSAVPSKGQTINVKDDSSVLKKIGCCSN 218
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/217 (86%), Positives = 206/217 (94%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M GY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++L +D K
Sbjct: 1 MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
RAVEAG +G++S LPSKG+TINVK+DSSVLKR GCCS
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 206/218 (94%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL ID+K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAF+EVL+QIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVEAG +G++S +PS G+TINVK+DSSV KR GCCSN
Sbjct: 181 KAVEAGESGSSSAVPSIGQTINVKEDSSVFKRFGCCSN 218
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/217 (82%), Positives = 204/217 (94%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+ELR HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK +AE+ESLYFMETSAL+ATNVENAF EVLTQIY+IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++VE G G AS++P+KGE INVKDD+S LKR+GCCS
Sbjct: 181 KSVEGGDEGAASSVPAKGERINVKDDASALKRVGCCS 217
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 201/218 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGYK D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL ID K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+ GRWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLV VSTEDGKAFAE+ESLYFMETSAL+ATNVENAF+EVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
RAVEAG + S +PS+G+TINV +DSSVL R CCSN
Sbjct: 181 RAVEAGDRASTSVVPSQGQTINVNEDSSVLNRYRCCSN 218
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 201/218 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGYK D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL ID K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+ GRWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLV VSTEDGKAFAE+ESLYFMETSAL+ATNVENAF+EVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
RAVEAG + S +PS+G+TINV +DSSVL R CCSN
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 202/218 (92%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++ +++ K
Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATF+N RWLRELR HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK DLRHLVAV TE+ KAFAE+ESLYFMETSALDATNVENAFTEVLTQI+KIVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
R+V+ G G ++ LP KGETINVK+D SVLKR+GCCSN
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 179/218 (82%), Positives = 205/218 (94%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNV+NAF EVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+EAG +G AS +PSKGE I+V D S +KR+GCCSN
Sbjct: 181 KAMEAGDDGAASAVPSKGEKIDVGKDVSAMKRVGCCSN 218
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/219 (84%), Positives = 205/219 (93%), Gaps = 1/219 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGYK +EYDYLFKLVLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFAT+SL ID K
Sbjct: 1 MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+N RWL+ELR+HTDPN++
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK DLRHL+ V TEDGK+FAE+ESLYFMETSALDATNVE+AFTEVL+QIY+IVSK
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
Query: 181 RAVEAGSNGTAS-TLPSKGETINVKDDSSVLKRIGCCSN 218
R+VEAG G+AS TLPSKG+TI+VKDDSSVLKRIGCCS+
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDVKDDSSVLKRIGCCSS 219
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/218 (83%), Positives = 199/218 (91%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGYK D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEF T+SL ID K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+ GRWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLV VSTEDGKAFAE+ESLYFMETSAL+ATNVENAF+EVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
RAVEAG + S PS+G+TINV +DSSVL R CCSN
Sbjct: 181 RAVEAGDRASTSVAPSQGQTINVNEDSSVLNRYRCCSN 218
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/218 (82%), Positives = 205/218 (94%), Gaps = 1/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D+K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+ELR HTD NI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK++AE+ESLYFMETSAL+ATNVENAF EVLTQIY+IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVE NGTAS +P+KGE I++K+D S LKR+GCCS+
Sbjct: 181 KAVEGAENGTAS-VPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 203/218 (93%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNV+NAF EVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E G G AS +PSKGE I+V D S +KR+GCCS+
Sbjct: 181 KAMETGDEGAASAVPSKGEKIDVSKDVSAMKRVGCCSS 218
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/218 (80%), Positives = 202/218 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D+K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNV+NAF EVL QIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E G N AS +PSKGE I+V D S +KR+GCCS+
Sbjct: 181 KAMETGDNAAASAVPSKGEKIDVNKDVSAMKRVGCCSS 218
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 181/218 (83%), Positives = 201/218 (92%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++ +++ K
Sbjct: 1 MASYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATF+N RWLRELR HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK DLRHLVAV TE+ KAFAE+ESLYFMETSALDATNVE+AFTEVL+QI+KIVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
R+V+ G G ++ LP KGETINVK+D SVLKR+GCCSN
Sbjct: 181 RSVDGG--GDSTELPGKGETINVKEDGSVLKRMGCCSN 216
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/217 (81%), Positives = 200/217 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D K
Sbjct: 1 MGTSSSEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+ELR HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK +AE+ESLYFMETSAL+ATNVENAF EVLTQIY+IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++VE G G AS++P+KGE INVKDD+S LKR+GCCS
Sbjct: 181 KSVEGGDEGAASSVPAKGERINVKDDASALKRVGCCS 217
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/218 (81%), Positives = 199/218 (91%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+SL IDNK
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T++NV RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAVST++ K AE+E LYFMETSAL+ATNVENAFTE LTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVEAG G S+ P KGETIN+KD+ S K+ GCCS+
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/218 (81%), Positives = 203/218 (93%), Gaps = 1/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D+K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+ELR HTD NI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK DLRHLVAVSTEDGK++AE+ESLYFMETSAL+ATNVENAF EVLTQIY+IVSK
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVE NG AS +P+KGE I++K+D S LKR+GCCS+
Sbjct: 181 KAVEGAENGNAS-VPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 175/218 (80%), Positives = 202/218 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNV++AF EVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E G AS +PSKGE I+V D S +KR+GCCS+
Sbjct: 181 KAMETGDEAAASAVPSKGEKIDVSKDVSAMKRVGCCSS 218
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 199/218 (91%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+SL ID K
Sbjct: 1 MAGYRGDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAIT AYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTE+ K+ AE+E+LYFMETSAL+ATNVENAFTE LTQIY+IVSK
Sbjct: 121 VMLLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVEAG G ST P KG+TIN+KD+ S K+ GCCS+
Sbjct: 181 KAVEAGDEGATSTAPPKGQTINIKDEGSAWKKFGCCSS 218
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/218 (80%), Positives = 201/218 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D+K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNV+NAF EVL QIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E G N AS +PSKGE I+V D S KR+GCCS+
Sbjct: 181 KAMETGDNAAASAVPSKGEKIDVNKDVSAKKRVGCCSS 218
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 201/218 (92%), Gaps = 1/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D+K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+ELR HTD NI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK DLRHLVAVSTEDGK++AE+ESLYFMETSAL+ATNVENAF EVLTQIY IVSK
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ VE NG AS +P+KGE I++K+D S LKR+GCCS+
Sbjct: 181 KTVEGAENGNAS-VPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/218 (81%), Positives = 202/218 (92%), Gaps = 1/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D+K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+NV RWL+ELR HTD NI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK++AE+ESLYFMETSAL+ATNVENAF EVLTQIY IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVE NGT S +P+KGE I++K+D S LKR+GCCS+
Sbjct: 181 KAVEVAENGTTS-VPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/218 (80%), Positives = 201/218 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNVEN+F EVLTQIY IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+EAG A+++P KGE I+V D S +K+ GCCS+
Sbjct: 181 KAMEAGDGTAAASVPPKGEKIDVSKDVSAVKKAGCCSS 218
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 207/218 (94%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL +D K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVL+QIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVEAG G++S++PS G+TINVK+DSSVLKR GCCSN
Sbjct: 181 KAVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 218
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 200/218 (91%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNVE AF EVLTQ+Y +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E +G AS +PSKGE I+V D S +K+ GCCS+
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/217 (79%), Positives = 202/217 (93%), Gaps = 1/217 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D+K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+K+QIWDTAGQERYRAITSAYYRGA+GALLVYDVTRHATF+NV RWL+ELR HTD NI+
Sbjct: 61 VIKSQIWDTAGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK++ E+ESLYF+ETSAL+A+NVENAF EVLTQIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+AVE NGTAS +P+KGE I++K+D S LKR+GCCS
Sbjct: 181 KAVEGAENGTAS-VPAKGEKIDLKNDVSALKRVGCCS 216
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/217 (81%), Positives = 198/217 (91%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL++D KV
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF NVGRWLRELR+HTDP+I+
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVC 125
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
MLIGNK+DLRHLVAVSTEDGK FAE ES+YFMETSALDATNV+NAF EVLTQIY+IV+K+
Sbjct: 126 MLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKK 185
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
VEA +G+A P KGE INVKDD S +KR+GCCSN
Sbjct: 186 PVEAPEDGSAG--PGKGEKINVKDDVSAMKRVGCCSN 220
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/217 (81%), Positives = 198/217 (91%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL++D KV
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF NVGRWLRELR+HTDP+I+
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVC 125
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
MLIGNK+DLRHLVAVSTEDGK FAE ES+YFMETSALDATNV+NAF EVLTQIY+IV+K+
Sbjct: 126 MLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKK 185
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
VEA +G+A P KGE INVKDD S +KR+GCCSN
Sbjct: 186 PVEAPEDGSAG--PGKGEKINVKDDVSAMKRVGCCSN 220
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 206/218 (94%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL +D K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVL+QIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVEAG G++S++PS G+TINVK+D SVLKR GCCSN
Sbjct: 181 KAVEAGEGGSSSSVPSVGQTINVKEDFSVLKRFGCCSN 218
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/218 (79%), Positives = 200/218 (91%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNVE AF EVLTQIY IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E +G AS +PSKGE I+V D S +K+ GCCS+
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 200/218 (91%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNVE AF EVLTQIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E +G AS +PSKGE I+V D S +K+ GCCS+
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/217 (80%), Positives = 203/217 (93%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
AGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL++D KV
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWL+ELR+HTDPNI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVENAF EVLTQIY+IVSKR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
AVEAG + A++ P KGE IN+KDD S +K+ GCCS+
Sbjct: 183 AVEAGED--AASGPGKGEKINIKDDVSAVKKGGCCSS 217
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 200/218 (91%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATNVE +F EVLTQIY ++SK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E +G AS +PSKGE I+V D S +K+ GCCS+
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 199/218 (91%), Gaps = 1/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+EL+ HTD NI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAV TEDGK++AE+ESLYF+ETSAL+A NVE AF EVLTQIY IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVE G NG+AS +P++GE IN+KD+S L RI CCS+
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESG-LNRIKCCSS 217
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/216 (80%), Positives = 201/216 (93%), Gaps = 2/216 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
AGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL++D KV
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWL+ELR+HTDPNI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVENAF EVLTQIY+IVSKR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+VEAG + A + P KGE IN+KDD S +K+ GCCS
Sbjct: 183 SVEAGDD--AGSGPGKGEKINIKDDVSAVKKGGCCS 216
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 173/216 (80%), Positives = 201/216 (93%), Gaps = 2/216 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
AGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL++D KV
Sbjct: 3 AGYREEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWL+ELR+HTDPNI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVENAF EVLTQIY+IVSKR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+VEAG + A + P KGE IN+KDD S +K+ GCCS
Sbjct: 183 SVEAGDD--AGSGPGKGEKINIKDDVSAVKKGGCCS 216
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 172/217 (79%), Positives = 202/217 (93%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
AGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL++D KV
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWL+ELR+HTDPNI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVENAF EVL QIY+IVSKR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKR 182
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
AVEAG + A++ P +GE IN+KDD S +K+ GCCS+
Sbjct: 183 AVEAGED--AASGPGRGEKINIKDDVSAVKKGGCCSS 217
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 198/218 (90%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D K
Sbjct: 64 MAGYRAEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 123
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 124 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 183
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHL+AVSTEDGK+FAE+E+L+FMETSAL+ATNVENAF EVLTQIY IVSK
Sbjct: 184 VMLVGNKSDLRHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSK 243
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E S +PS+GE I+V D S +KR GCCS+
Sbjct: 244 KALETSEQANGSAVPSQGEKIDVGKDVSAVKRGGCCSS 281
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 174/217 (80%), Positives = 196/217 (90%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL++D KV
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF NVGRWLRELR+HTD +I+V
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
MLIGNK+DLRHLVAVST+D K +AE ES+YFMETSALDATNV+NAF+EVLTQIY+IVSK+
Sbjct: 126 MLIGNKSDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKK 185
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
VEA G A P KGE INVKDD S +KR+GCCSN
Sbjct: 186 TVEALEEGAAG--PGKGEKINVKDDVSAMKRVGCCSN 220
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/217 (79%), Positives = 197/217 (90%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL++D KV
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF NVGRWLRELR+HTD +I+V
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAVST+D K FAE ES+YFMETSALDATNV+++F+EVLTQIY+IVSK+
Sbjct: 126 MLVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKK 185
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
VEA G A+ P KGE INVKDD S +KR+GCCSN
Sbjct: 186 TVEASEEGAAA--PGKGEKINVKDDVSAMKRVGCCSN 220
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/215 (80%), Positives = 197/215 (91%), Gaps = 2/215 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
Y+ +++YDYLFK V+IGDSGVGKSNLLSRFTKNEF LESKSTIGVEFATRSL++D KVVK
Sbjct: 10 YRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVK 69
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TF NV RWL+ELR+HTDP+I+VML
Sbjct: 70 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVVML 129
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DLRHLVAVSTEDG+ +AE ESLYFMETSALDATNV+NAF EVLTQIY+I S++ V
Sbjct: 130 VGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRKTV 189
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AG +G+A+ PSKGE INVKDD S LKR+GCCSN
Sbjct: 190 DAGEDGSAA--PSKGEKINVKDDVSALKRVGCCSN 222
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 176/215 (81%), Positives = 193/215 (89%), Gaps = 2/215 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
Y+ +++YDYLFK VLIGDSGVGKSNLLSRFTKNEF LESKSTIGVEFATRS+++D KVVK
Sbjct: 9 YRAEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVK 68
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF NV RWL+ELR+HTDP+I+VML
Sbjct: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVML 128
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DLRHLVAVSTEDGK +AE ESLYFMETSALDATNVENAF EVLTQIY+ VSK+ V
Sbjct: 129 VGNKSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTV 188
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
EA +G S P KGE INVKDD S LKRIGCCSN
Sbjct: 189 EASDDG--SNAPIKGEKINVKDDVSALKRIGCCSN 221
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 172/218 (78%), Positives = 198/218 (90%), Gaps = 1/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQ RYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+EL+ HTD NI+
Sbjct: 61 VIKAQIWDTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAV TEDGK++AE+ESLYF+ETSAL+A NVE AF EVLTQIY IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVE G NG+AS +P++GE IN+KD+S L RI CCS+
Sbjct: 181 KAVEGGENGSASAVPAQGEKINIKDESG-LNRIKCCSS 217
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 202/217 (93%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
+GY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL++D KV
Sbjct: 3 SGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+N RWL+ELR+HTDPNI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVE+AF EVLTQIY+IVSKR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKR 182
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
AVEAG + +++ P KGE IN+KDD S +K+ GCCS+
Sbjct: 183 AVEAGED--SASGPGKGEKINMKDDVSAVKKGGCCSS 217
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 201/217 (92%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
AGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL++D KV
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWL+ELR+HTDPNI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVENAF EVL QIY+IV KR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKR 182
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
AVEAG + A++ P +GE IN+KDD S +K+ GCCS+
Sbjct: 183 AVEAGED--AASGPGRGEKINIKDDVSAVKKGGCCSS 217
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/218 (79%), Positives = 200/218 (91%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L++D K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+NV RWL+EL+ HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHL+AV TEDGK++AEQESL FMETSAL+ATNVE+AF EVLTQIY+I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ VEAG +G AS +P KGE I VK+D S LK++GCCSN
Sbjct: 181 KQVEAGEDGNAS-VP-KGEKIEVKNDVSALKKLGCCSN 216
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 198/218 (90%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL +D+K
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV WL+ELR HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAV TED K+FAE+ESLYFMETSAL+ATNVENAF EVLTQI+ IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+EA S ++ +PSKG+ I++ D S +K+ GCCSN
Sbjct: 181 KAMEAASE--SANVPSKGDKIDIGKDVSAVKKGGCCSN 216
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 200/218 (91%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L++D K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+NV RWL+EL+ HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHL+AV TEDGK++AEQESL FMETSAL+ATNVE+AF EVLTQIY+I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ VEAG +G AS +P KGE I VK+D S LK++GCCSN
Sbjct: 181 KQVEAGEDGNAS-VP-KGEKIEVKNDVSALKKLGCCSN 216
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/223 (78%), Positives = 199/223 (89%), Gaps = 7/223 (3%)
Query: 1 MAG-----YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSL 55
MAG Y+ +++YDYLFK V+IGDSGVGKSNLLSRFTKNEF LESKSTIGVEFATRSL
Sbjct: 1 MAGSGGGAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSL 60
Query: 56 RIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHT 115
++D KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF NV RWL+ELR+HT
Sbjct: 61 QVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHT 120
Query: 116 DPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
DP+I+VML+GNK+DLRHLVAVSTEDG+ +AE ESLYFMETSALDATNV+NAF+EVLTQIY
Sbjct: 121 DPSIVVMLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIY 180
Query: 176 KIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+I S++ V+AG +G S+ PSKGE INVKDD S LKR GCCS+
Sbjct: 181 RIASRKTVDAGDDG--SSAPSKGENINVKDDVSSLKRAGCCSS 221
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 199/218 (91%), Gaps = 4/218 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL ++ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAV TED K+FAE ESLYFMETSAL++TNVENAF+EVLTQIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+EAG + + +PSKGE I+V D S +K+ GCCSN
Sbjct: 181 KAMEAGQD--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 199/218 (91%), Gaps = 4/218 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL ++ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAV TED K+FAE ESLYFMETSAL++TNVENAF+EVLTQIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+EAG + + +PSKGE I+V D S +K+ GCCSN
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 363 bits (931), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 199/218 (91%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+ ++D K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+NV RWL+EL+ HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHL+AV TEDGK++AEQESL FMETSAL+ATNVE+AF EVLTQIY+I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ VEAG +G AS +P KGE I VK+D S LK++GCCSN
Sbjct: 181 KQVEAGEDGNAS-VP-KGEKIEVKNDVSALKKLGCCSN 216
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 174/223 (78%), Positives = 198/223 (88%), Gaps = 7/223 (3%)
Query: 1 MAG-----YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSL 55
MAG Y+ +++YDYLFK V+IGDSGVGKSNLLSRFTKNEF LESKSTIGVEFATRSL
Sbjct: 1 MAGSGGGAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSL 60
Query: 56 RIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHT 115
++D KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF NV RWL+ELR+HT
Sbjct: 61 QVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHT 120
Query: 116 DPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
D +I+VML+GNK+DLRHLVAVSTEDG+ +AE ESLYFMETSALDATNV+NAF+EVLTQIY
Sbjct: 121 DSSIVVMLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIY 180
Query: 176 KIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+I S++ V+AG +G S+ PSKGE INVKDD S LKR GCCS+
Sbjct: 181 RIASRKTVDAGDDG--SSAPSKGENINVKDDVSSLKRAGCCSS 221
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 169/217 (77%), Positives = 194/217 (89%), Gaps = 2/217 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL++D KV
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF NVGRWLRELR+HTD +I+V
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAVST+D K FAE ES+YFMETSALDATNV+++F+EVLTQIY+IVSK+
Sbjct: 126 MLVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKK 185
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
VE G + P KGE INVKDD S +KR+GCCSN
Sbjct: 186 TVEVPEEGAVA--PGKGEKINVKDDVSAMKRVGCCSN 220
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 196/218 (89%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFK+VLIGDSGVGKSNLLS FTKNEF+LESKSTIGVEFATRSL +D+K
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV WL+ELR HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAV TED K+FAE+ESLYFMETSA +ATNVENAF EVLTQI+ IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+EA S ++ +PSKG+ I++ D S +K+ GCCSN
Sbjct: 181 KAMEAASE--SANVPSKGDKIDIGKDVSAVKKGGCCSN 216
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/217 (77%), Positives = 196/217 (90%), Gaps = 3/217 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M+ Y+ DE+YDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+R+D+K
Sbjct: 1 MSAYRADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+M +GNK DLRHL AVSTED KAFAE+E+ YFMETSAL++ NVENAFTEVLTQIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+A++ G + A LP KGETINVKDD S +K++GCCS
Sbjct: 181 KALDIGDDPAA--LP-KGETINVKDDVSAVKKVGCCS 214
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 196/218 (89%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M+ Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+T++NV +WL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTED K+FAE ESLYFMETSAL+ATNV+NAF EVLTQIY IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+E + AS + +KGE I++ D S +K+ GCCS+
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/217 (76%), Positives = 197/217 (90%), Gaps = 3/217 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MAAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+A+E G + A LP KG+TINVKDD S +K++GCCS
Sbjct: 181 KALEVGDDPGA--LP-KGQTINVKDDVSAVKKVGCCS 214
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 164/217 (75%), Positives = 197/217 (90%), Gaps = 4/217 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+KV+
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVS EDGKAFAE+E+ YFMETSAL++TNVENAFTEVL+QIY+IVSK+A
Sbjct: 122 LVGNKADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
++ G + A +PSKG+TI+V KDD + +K++GCCS
Sbjct: 182 LDVGEDPAA--VPSKGQTIHVGNKDDVTAMKKVGCCS 216
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 167/219 (76%), Positives = 198/219 (90%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MASYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A++ G + A LP KG+TINV KDD S +K++GCCS
Sbjct: 181 KALDIGDDPAA--LP-KGQTINVGTKDDVSAVKKVGCCS 216
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 165/220 (75%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+M +GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVL+QIY++VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + A LP KG+TINV KDD S +K++GCCSN
Sbjct: 181 KALDIGDDPAA--LP-KGQTINVGSKDDVSAVKKVGCCSN 217
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 165/220 (75%), Positives = 198/220 (90%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVSTED +AFAE+E+ +FMETSAL++ NVENAFTEVLTQIY++V +
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A+E G + A LP KG+TINV KDD S +K++GCCS+
Sbjct: 181 KALEIGEDPAA--LP-KGQTINVGNKDDVSAMKKVGCCSS 217
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 168/219 (76%), Positives = 196/219 (89%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK DLRHL AVSTED AFAE+E+ +FMETSAL++ NVENAFTEVLTQIY++VSK
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+E G + TA LP KG+TI+V +DD S +K+ GCCS
Sbjct: 181 KALEIGDDPTA--LP-KGQTIDVGSRDDVSAVKKSGCCS 216
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 196/218 (89%), Gaps = 4/218 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AV+TED KAFAE+ES +FMETSAL++ NVENAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCCS 217
+A++ G + A LP KG+TINV KDD S +K++GCCS
Sbjct: 181 KALDVGDDPAA--LP-KGQTINVGKDDVSAVKKVGCCS 215
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+N+ RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+M +GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVL+QIY++VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + A LP KG+TINV KDD S +K++GCCSN
Sbjct: 181 KALDIGDDPAA--LP-KGQTINVGSKDDVSAVKKVGCCSN 217
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 197/217 (90%), Gaps = 4/217 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
GY+ +++YDYLFKLVLIGDSGVGKSNLLSRF++NEFNLESKSTIGVEFATRS+R+D+K+V
Sbjct: 4 GYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRH TF+NV RWL+ELR+HTD NI++M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIM 123
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVLT+IYK+V ++A
Sbjct: 124 LVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKA 183
Query: 183 VEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCCSN 218
+E G + A LP KG+TINV KDD S +K++GCCS+
Sbjct: 184 LEVGDDPAA--LP-KGQTINVGKDDVSAVKKVGCCSS 217
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 163/218 (74%), Positives = 194/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+KVV
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVS ED KAFAE+ES +FMETSAL+A NVENAFTEVLTQIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 182 LDIGDDPAA---PPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 166/219 (75%), Positives = 194/219 (88%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK DLRHL AVSTED + FAE+E+ +FMETSAL++ NVENAFTEVLTQIY +VSK
Sbjct: 121 VMLVGNKADLRHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+E G + A LP KG+TINV +DD S +K+ GCCS
Sbjct: 181 KALEIGDDPAA--LP-KGQTINVGSRDDVSAVKKSGCCS 216
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 167/220 (75%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDY FK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADDDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK DLRHL AVSTED AFAE+E+ +FMETSAL++ NVENAFTEVLTQIY++VSK
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A+E G + A LP KG+TINV +DD S +K+ GCCS+
Sbjct: 181 KALEIGDDPAA--LP-KGQTINVGSRDDVSAVKKSGCCSS 217
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 194/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+KVV
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVS ED KAFAE+ES +FMETSAL+A NVE+AFTEVLTQIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 182 LDIGDDPAA---PPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD +I+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVS +D KAFAE+E+ +FMETSAL++ NVENAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKGDLRHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + A LP KG+TINV KDD S +K+ GCCS+
Sbjct: 181 KALDIGDDPAA--LP-KGQTINVGTKDDVSAVKKAGCCSS 217
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/219 (75%), Positives = 194/219 (88%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK DLRHL AVSTED +FAE+E +FMETSAL++ NVE+AFTEVLTQIY++VSK
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+E G + A LP KG+TINV +DD S +K+ GCCS
Sbjct: 181 KALEIGDDPAA--LP-KGQTINVGSRDDVSAVKKGGCCS 216
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 166/219 (75%), Positives = 192/219 (87%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ DE+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D K
Sbjct: 1 MGAYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+N+ RWL+ELR+HTD NI+
Sbjct: 61 VLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK DLRHL AVSTE+ AFAE+E +FMETSAL++ NVENAFTEVLTQIY +VSK
Sbjct: 121 VMLVGNKADLRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+E G + A LP KG+TINV +DD S +K+ GCCS
Sbjct: 181 KALEIGDDPAA--LP-KGQTINVGSRDDVSAVKKDGCCS 216
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 194/219 (88%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK DLRHL AVSTED +F+E+E+ YFMETSAL++ NVE+AFTEVLTQIY++VSK
Sbjct: 121 VMLVGNKADLRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+E G + A LP KG+TINV +DD S +K+ GCCS
Sbjct: 181 KALEIGDDPAA--LP-KGQTINVGSRDDVSAVKKAGCCS 216
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 158/215 (73%), Positives = 192/215 (89%), Gaps = 2/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K++
Sbjct: 2 AYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TF+NV RWL+ELR+HT+ NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DLRHL AVSTED + FAE+E LYF+ETSAL++TNVENAF +VLTQIY+IVSK+A
Sbjct: 122 LVGNKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ + A+ P +G+TINVKDD + K++GCCS
Sbjct: 182 LDVSEDNAAA--PPQGQTINVKDDVTATKKVGCCS 214
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YD+L+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HT+ NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL+A NVENAFTEVL+QIY++ SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + T TLP KG++INV KDD S +K++GCCS+
Sbjct: 181 KALDIGDDHT--TLP-KGQSINVGSKDDVSEVKKVGCCSS 217
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD N +
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AV+TED K FAE+ES +FMETSAL++ NVENAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + T LP KG+TINV +DD S +K+ GCCS+
Sbjct: 181 KALDVGDDST--YLP-KGQTINVGSRDDVSAVKKAGCCSS 217
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/218 (73%), Positives = 192/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+KVV
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RW+REL++HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVLTQIY +VSK+A
Sbjct: 122 LVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P KG+TINV KDD S +K+ CCS+
Sbjct: 182 LDIGDDPAA---PPKGQTINVGGKDDVSAVKKSACCSS 216
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 163/218 (74%), Positives = 193/218 (88%), Gaps = 4/218 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HT+ NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AV+TED AFAE+E +FMETSAL++ NVENAFTEVLTQIY +VS+
Sbjct: 121 IMLVGNKADLRHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCCS 217
+A++ G + A LP KG+TINV KDD S +K++GCCS
Sbjct: 181 KALDVGDDPAA--LP-KGQTINVGKDDVSAVKKVGCCS 215
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 343 bits (879), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 159/216 (73%), Positives = 196/216 (90%), Gaps = 4/216 (1%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
Y+ DE+YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K+VK
Sbjct: 3 YRSDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+TR T++NV RWL+EL++HTD NI+VML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DLRHL AVSTEDG+AF+E+E LYFMETSAL++TNVENAF ++LTQIY++VSK+A+
Sbjct: 123 VGNKSDLRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+ G + +A+ P+KG+TINV KDD + K++GCCS
Sbjct: 183 DVGEDPSAA--PAKGQTINVGGKDDVTATKKVGCCS 216
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/219 (73%), Positives = 195/219 (89%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVST+D KAFAE+E+ +FMETSAL++ NV+N+FTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+ +E G + A LP KG+TINV +DD S +K++GCCS
Sbjct: 181 KTLEIGDDPAA--LP-KGQTINVGSRDDVSAVKKVGCCS 216
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 194/218 (88%), Gaps = 4/218 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D K
Sbjct: 1 MGAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD +I+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DL HL AVSTED KA+AE+ES +F+ETSAL++TNVENAFTEVLTQIY +VS+
Sbjct: 121 IMLVGNKADLGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCCS 217
+A+E G A+T+P KG+TINV KDD S +K GCCS
Sbjct: 181 KALETGDE--AATVP-KGQTINVGKDDVSAIKIGGCCS 215
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 162/218 (74%), Positives = 194/218 (88%), Gaps = 4/218 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFKLVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AV+TED AFAE+E+ +FMETSAL++ NVENAFTEVLTQI+++VS+
Sbjct: 121 IMLVGNKADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCCS 217
+A++ G + A LP KG+TI V KDD S +K++GCCS
Sbjct: 181 KALDVGDDPAA--LP-KGQTITVGKDDVSAVKKVGCCS 215
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 161/220 (73%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YD+L+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HT+ NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL+A NVENAFTEVL+QIY++ SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + +TLP KG++INV KDD S +K++GCCS+
Sbjct: 181 KALDIGDD--PATLP-KGQSINVGSKDDVSEVKKVGCCSS 217
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 193/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLL+RFT+NEF+LESKSTIGVEFATRS+R+D+KVV
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+EL++HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVS ED KAFAE+E +FMETSAL+A NVE+AFTEVLTQIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 182 LDIGDDPAA---PPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 342 bits (876), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 194/219 (88%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVST+D KAFAE+E+ +FMETSAL++ NV+NAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+ +E G + A LP KG+TINV +DD S +K+ GCCS
Sbjct: 181 KTLEIGDDPAA--LP-KGQTINVGSRDDVSAVKKSGCCS 216
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 342 bits (876), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 193/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+KVV
Sbjct: 109 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 168
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HTD NI++M
Sbjct: 169 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 228
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVS ED K FAE+ES +FMETSAL++ NVE+AFTEVLTQIY++VSK+A
Sbjct: 229 LVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 288
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 289 LDIGDDPAA---PPRGQTINVGGKDDVSAVKKSGCCSS 323
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 192/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+KVV
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RW+REL++HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AV TED KAFAE+E+ +FMETSAL+A NVE+AFTEVLTQIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P KG+TINV KDD S +K+ CCS+
Sbjct: 182 LDIGDDPAA---PPKGQTINVGGKDDVSAVKKSACCSS 216
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 159/218 (72%), Positives = 193/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLL+RFT+NEF+LESKSTIGVEFATRS+R+D+KVV
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+EL++HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVS ED KAFAE+E +FMETSAL++ NVE+AFTEVLTQIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 182 LDIGDDPAA---PPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 193/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+KVV
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVS ED K FAE+ES +FMETSAL++ NVE+AFTEVLTQIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 182 LDIGDDPAA---PPRGQTINVGGKDDVSAVKKSGCCSS 216
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 161/219 (73%), Positives = 194/219 (88%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV +WL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVST+D KAFAE+E+ +FMETSAL++ NV+NAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+ +E G + A LP KG+TINV +DD S +K+ GCCS
Sbjct: 181 KTLEIGDDPAA--LP-KGQTINVGSRDDVSAVKKSGCCS 216
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 499 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 558
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD +I+
Sbjct: 559 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 618
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVS +D KAFAE+E+ +FMETSAL++ NVENAFTEVLTQIY++VS+
Sbjct: 619 IMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 678
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + A LP KG+TINV KDD S +K+ GCCS+
Sbjct: 679 KALDIGDDPAA--LP-KGQTINVGTKDDVSAVKKAGCCSS 715
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 340 bits (871), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 161/219 (73%), Positives = 193/219 (88%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AV+T D KAFAE+E+ +FMETSAL++ NV+NAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+ +E G + A LP KG+TINV +DD S +K+ GCCS
Sbjct: 181 KTLEIGDDPAA--LP-KGQTINVGSRDDVSAVKKSGCCS 216
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 193/219 (88%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVST+D K FAE+E+ +FMETSAL++ NV+NAFTEVLTQIY++VSK
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+ +E G + A LP KG+TINV KDD S +K++GC S
Sbjct: 181 KTLEIGDDPAA--LP-KGQTINVGSKDDVSAVKKVGCYS 216
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 159/218 (72%), Positives = 192/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+KVV
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVS ED K FAE+E +FMETSAL++ NVE+AFTEVLTQIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 182 LDIGDDPAA---PPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 161/183 (87%), Positives = 175/183 (95%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGYK D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL ID K
Sbjct: 1 MAGYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVL+QIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 RAV 183
R V
Sbjct: 181 RTV 183
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 159/218 (72%), Positives = 191/218 (87%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLL+RFT+NEF+LESKSTIGVEFATRS+R+D+KVV
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+EL++HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AV ED KAFAE+E YF ETSAL+A NVE+AFTEVLTQIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 182 LDIGDDPAA---PPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 193/219 (88%), Gaps = 3/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D+K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWL-RELREHTDPNI 119
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV + R + H +
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHC 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
V L+GNK DLRHLVAVSTEDGK++AE+ESLYFMETSAL+ATNVEN+F EVLTQIY+I+S
Sbjct: 121 CV-LVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILS 179
Query: 180 KRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
K+AVE NG AS +P+KGE I++K+D S LKR+GCCS+
Sbjct: 180 KKAVEGAENGNAS-VPAKGEKIDLKNDVSALKRVGCCSS 217
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 159/184 (86%), Positives = 177/184 (96%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L +D+K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+ELR HTD NI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAVSTEDGK++AE+ESLYFMETSAL+ATNVENAF EVLTQIY IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 RAVE 184
+AVE
Sbjct: 181 KAVE 184
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 159/218 (72%), Positives = 190/218 (87%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+KVV
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RW+RELR+HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AV TED KAFAE+E+ +FMETSAL+A NVE AFTEVLTQIY +VSK+A
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G+TI+V KDD S +K+ CCS+
Sbjct: 182 LDIGDDPAA---PPRGQTISVGGKDDVSAVKKSACCSS 216
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 159/216 (73%), Positives = 192/216 (88%), Gaps = 5/216 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+KVVKA
Sbjct: 28 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKA 87
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HTD NI++ML+
Sbjct: 88 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLV 147
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DLRHL AVS ED K FAE+ES +FMETSAL++ NVE+AFTEVLTQIY++VSK+A++
Sbjct: 148 GNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALD 207
Query: 185 AGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
G + A P +G+TINV KDD S +K+ GCCS+
Sbjct: 208 IGDDPAA---PPRGQTINVGGKDDVSAVKKSGCCSS 240
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/220 (71%), Positives = 193/220 (87%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LE+KSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVSTED +AFAE+E YFMETSAL++ NVEN+FTEVLTQ Y++VS+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+ ++ G + T LP KG+TI++ KDD S +K+ GCCS+
Sbjct: 181 KILDIGDDPTV--LP-KGQTIDIGSKDDVSAVKKAGCCSS 217
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 336 bits (862), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/220 (71%), Positives = 194/220 (88%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL A++ ED AFA++++ +FMETSAL++ NVENAFTEVLTQIY++VS+
Sbjct: 121 IMLVGNKADLRHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + A LP +G+TINV +DD S +K+ GCCS+
Sbjct: 181 KALDIGDDPAA--LP-RGQTINVGSRDDVSAVKKAGCCSS 217
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 195/217 (89%), Gaps = 4/217 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+K++
Sbjct: 2 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TF+NV RWL+EL++HTD NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+ LRHL AVS +DG++F+E+E L+FMETSAL++TNVENAF ++LTQIY++VSK+A
Sbjct: 122 LVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
++ G + +A +P KG+TI+V KDD + K++GCCS
Sbjct: 182 LDVGEDPSA--VPGKGQTISVGNKDDVTATKKVGCCS 216
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 157/218 (72%), Positives = 190/218 (87%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +++KVV
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RW+RELR+HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AV TED KAFAE+++ +FMETSAL+A NVE+AFTEVL QIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P +G TINV KDD S +K+ CCS+
Sbjct: 182 LDIGDDPAA---PPRGHTINVGGKDDVSAVKKSACCSS 216
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 164/221 (74%), Positives = 193/221 (87%), Gaps = 6/221 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQ+WDTAGQERYRAITSAYYRGAVGALLVYDV+RH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VVKAQVWDTAGQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQE-SLYFMETSALDATNVENAFTEVLTQIYKIVS 179
VML+GNK DLRHL AVSTED F E + +FMETSAL++ NVENAFTEVLTQIY++VS
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVS 180
Query: 180 KRAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
K+A+E G + TA LP KG+TINV +DD S +K+ GCCS+
Sbjct: 181 KKALEIGDDPTA--LP-KGQTINVGSRDDVSPVKKSGCCSS 218
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/218 (71%), Positives = 192/218 (88%), Gaps = 5/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +++YDYLFK+VLIGDSGVGKSNLL+RFT+NEF+LESKSTIGVEFATRS+ +D+KVV
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWLREL++HTD NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AV +ED KAFAE+E+ +FMETSAL+A NVE+AFTEVL+QIY++VSK+A
Sbjct: 122 LVGNKADLRHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
++ G + A P KG+TI+V KDD S +K+ CCS+
Sbjct: 182 LDIGDDPAA---PPKGKTISVGSKDDVSAVKKSACCSS 216
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 154/215 (71%), Positives = 193/215 (89%), Gaps = 3/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K++
Sbjct: 2 AYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+NV RWL+EL++HTD NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DLRHL VSTEDG+A++E+E LYFMETSAL++ NVEN+F ++LTQIY++VSK+A
Sbjct: 122 LVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCC 216
++ G + +A +P KG+TINV KDD + K++GCC
Sbjct: 182 LDVGEDPSA--VPGKGQTINVSKDDVTATKKVGCC 214
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/209 (77%), Positives = 188/209 (89%), Gaps = 5/209 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D+KVVKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+VML+GNK DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
RHL AVSTED AFAE+E+ +FMETSAL++ NVE+AFTEVLTQIY++VSK+A+E G +
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPA 180
Query: 191 ASTLPSKGETINV--KDDSSVLKRIGCCS 217
A LP KG+TINV +DD S +K+ GCCS
Sbjct: 181 A--LP-KGQTINVGSRDDVSAVKKGGCCS 206
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 153/215 (71%), Positives = 192/215 (89%), Gaps = 3/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K++
Sbjct: 2 AYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+EL++HTD NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DLRHL VSTEDG+A++E+E LYFMETSAL++ NVEN+F ++LTQIY++VSK+A
Sbjct: 122 LVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCC 216
++ G + +A +P KG+TINV KDD + K++GCC
Sbjct: 182 LDVGEDPSA--VPGKGQTINVSKDDVTATKKVGCC 214
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 156/219 (71%), Positives = 194/219 (88%), Gaps = 4/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ +++YDYLFK+VL GDSGVGKSNLLSRFT+N+F+ +S++TIGVEFATRS++ D+K
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL A+STE+ KAFAE+E+ +FMETSAL+A NV+NAFTEVLTQIY++VSK
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+EAG + T + LP KG+ INV +DD S +K+ GCCS
Sbjct: 181 KALEAGDDPT-TALP-KGQMINVGSRDDISAVKKPGCCS 217
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 152/217 (70%), Positives = 194/217 (89%), Gaps = 4/217 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+K++
Sbjct: 2 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRH TF+NV RWL+EL++HTD NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+ LRHL AVS +DG++F+E+E L+FMETSAL++TNVENAF ++ TQIY++VSK+A
Sbjct: 122 LVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
++ G + +A +P KG+TI+V KDD + K++GCCS
Sbjct: 182 LDVGEDPSA--VPGKGQTISVGNKDDVTATKKVGCCS 216
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 163/213 (76%), Positives = 190/213 (89%), Gaps = 4/213 (1%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
DEEYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+RI +K+VKAQ
Sbjct: 4 ADEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD TRH TF+NV RWL+ELR+HTD +++ML+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVG 123
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NKTDLRHL AVSTE+ AFAE+E++YFMETSAL++ NV++AF EVLTQIY +VSKRA+E
Sbjct: 124 NKTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSKRALEK 183
Query: 186 GSNGTASTLPSKGETINV-KDDSSVLKRIGCCS 217
NG+AS +P KGETIN+ +DD S +K+ CCS
Sbjct: 184 -ENGSAS-VP-KGETINIGRDDVSEVKKSTCCS 213
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 332 bits (851), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 156/219 (71%), Positives = 194/219 (88%), Gaps = 4/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ +++YDYLFK+VL GDSGVGKSNLLSRFT+N+F+ +S++TIGVEFATRS++ D+K
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL A+STE+ KAFAE+E+ +FMETSAL+A NV+NAFTEVLTQIY++VSK
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+EAG + T + LP KG+ INV +DD S +K+ GCCS
Sbjct: 181 KALEAGDDPT-TALP-KGQMINVGGRDDISAVKKPGCCS 217
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 329 bits (843), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 161/212 (75%), Positives = 188/212 (88%), Gaps = 4/212 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+RI +K+VKAQI
Sbjct: 5 DEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD TRH TF+NV RWL+ELR+HTD +++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL+HL AVSTE+ FAE+E++YFMETSAL++ NV+NAF EVLTQIY +VSK+ +E
Sbjct: 125 KADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTLEK- 183
Query: 187 SNGTASTLPSKGETINV-KDDSSVLKRIGCCS 217
NG+AS +P KGETIN+ KDD S +K+ GCCS
Sbjct: 184 ENGSAS-VP-KGETINIGKDDVSDVKKSGCCS 213
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 328 bits (842), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 191/219 (87%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFKLVLIGDSGVGKSNLLSRFT+NEF++ESKSTIGVEFATRS+ +D K
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH TF+NV RWL+ELR+HTD N++
Sbjct: 61 IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AV TE+ ++F+E+E+++FMETSALDATNVE AFT VLTQIY+++S+
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A++ G +LP KG+TI++ KDD + +K GCCS
Sbjct: 181 KALDG--TGDPMSLP-KGQTIDIGNKDDVTAVKSSGCCS 216
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 325 bits (834), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 154/219 (70%), Positives = 192/219 (87%), Gaps = 4/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M YK +++YDYLFK+VL GDSGVGKSNLLSRFT+N+F+ +S+STIGVEFATRS+++D+K
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD N +
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DL HL A+STE+ K FAE+E+ +FMETSAL+A NVENAFTEVLTQIY++VSK
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A++AG + T + LP KG+ INV +DD S +K+ GCC+
Sbjct: 181 KALDAGDDPT-TALP-KGQMINVGSRDDVSAVKKSGCCA 217
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/217 (71%), Positives = 185/217 (85%), Gaps = 1/217 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG++ +++YDYLFK+ LIGDSGVGKSNL RFT+NEF+LESKSTIGVEFATRSL +D K
Sbjct: 1 MAGFRAEDDYDYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAVSTEDG AE+ESL FMETSAL+ATNV+NAF EVL++ ++++
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSKSTALLAR 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
R + +PSK E I+V D S +K++GCCS
Sbjct: 181 RLWKLVIIDQ-DAVPSKSEKIDVSKDVSAVKKVGCCS 216
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/211 (73%), Positives = 185/211 (87%), Gaps = 4/211 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE+YDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+RI +K VKAQI
Sbjct: 5 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDVTR TF+NV RWL+ELR+HTD NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL AV TE+ AFAE+E+ YFMETSAL++ NV+NAF EVL++IY +VS++ +E G
Sbjct: 125 KADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTLEKG 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ A LP +G+TIN+ D S+V K+ GCCS
Sbjct: 185 NDPGA--LP-QGQTINLGDVSAV-KKPGCCS 211
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 153/220 (69%), Positives = 191/220 (86%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR-SLRIDN 59
M YK +++YDYLFK+VL GDSGVGKSNLLSRFT+N+F+ +S+STIGVEFATR +++D+
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDD 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD N
Sbjct: 61 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANT 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
++ML+GNK DL HL A+STE+ K FAE+E+ +FMETSAL+A NVENAFTEVLTQIY++VS
Sbjct: 121 VIMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVS 180
Query: 180 KRAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
K+A++AG + T + LP KG+ INV +DD S +K+ GCC+
Sbjct: 181 KKALDAGDDPT-TALP-KGQMINVGSRDDVSAVKKSGCCA 218
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 318 bits (816), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 151/214 (70%), Positives = 183/214 (85%), Gaps = 3/214 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE+YDYLFKLVLIGDSGVGKSNLLSRFT+NEF+LE+KSTIGVEFATRS+ +D+K+VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HT+ ++VML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL AVSTE+ FAE+ES+YFMETSAL++ NV+NAF EVLTQIY +VS++ +E
Sbjct: 124 KADLRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETV 183
Query: 187 SNGTASTLPSKGETINV---KDDSSVLKRIGCCS 217
+ ++ KGETI + DD S +K+ GCCS
Sbjct: 184 DDDPSTKALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 177/215 (82%), Gaps = 1/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
+K D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L++D K V
Sbjct: 2 AHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI+++
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIL 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AV+ EDG+A AE+ESL F+ETSAL+ATNVE AF +LT+IY I+SK+A
Sbjct: 122 MAGNKSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ A STLP +G TINV D S KR CCS
Sbjct: 182 LAAQEAAGNSTLPGQGTTINVADTSGNTKR-SCCS 215
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/214 (69%), Positives = 177/214 (82%), Gaps = 1/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
GNK+DL HL AVS +DG+A AE+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A+
Sbjct: 123 AGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A +TLP +G TINV D S KR GCCS
Sbjct: 183 AAQEAAVGTTLPGQGTTINVGDASGNTKR-GCCS 215
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/214 (70%), Positives = 181/214 (84%), Gaps = 3/214 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE+YDYLFKLVLIGDSGVGKSNLLSRFT+NEF+LE+KSTIGVEFATRS+ +D+K+VKAQI
Sbjct: 4 DEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HT+ ++VML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL AVSTE+ +AE+E++YFMETSAL++ NV NAF EVLTQIY +VS++ +E
Sbjct: 124 KADLRHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLETM 183
Query: 187 SNGTASTLPSKGETINV---KDDSSVLKRIGCCS 217
+ S KGETI + DD S +K+ GCCS
Sbjct: 184 DDDPNSKALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 313 bits (803), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 188/219 (85%), Gaps = 10/219 (4%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ +++YDYLFK+VL GDSGVGKSNLLSRFT+N+F+ +S++TIGVEFATRS++ D+K
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQE SAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 114
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL A+STE+ KAFAE+E+ +FMETSAL+A NV+NAFTEVLTQIY++VSK
Sbjct: 115 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 174
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+EAG + T + LP KG+ INV +DD S +K+ GCCS
Sbjct: 175 KALEAGDDPT-TALP-KGQMINVGGRDDISAVKKPGCCS 211
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 148/215 (68%), Positives = 178/215 (82%), Gaps = 2/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVS +DG+A AE+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A
Sbjct: 122 MAGNKSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ A ++LP +G TINV D S+ KR GCCS
Sbjct: 182 L-AAQEAAGTSLPGQGTTINVADSSANTKR-GCCS 214
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VL GDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVDHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
GNK+DL HL AVS +DG+A AE+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A+
Sbjct: 123 AGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A +TLP +G TINV D S KR GCCS
Sbjct: 183 AAQEAAVGTTLPGQGTTINVGDASGNTKR-GCCS 215
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 312 bits (799), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
GNK+DL HL AVS +DG+A AE+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A+
Sbjct: 123 AGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A + LP +G TINV D S KR GCCS
Sbjct: 183 AAQEAAVGTILPGQGTTINVGDASGNTKR-GCCS 215
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
GNK+DL HL AV +DG+ AE+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A+
Sbjct: 123 AGNKSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A G +TLP +G TINV D S KR GCCS
Sbjct: 183 AAQEAGVGTTLPGQGTTINVGDASGNTKR-GCCS 215
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/215 (67%), Positives = 173/215 (80%), Gaps = 1/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L++D K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGA LVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AV EDG A AE+E L F+ETSAL+ATN+E AF +LT+IY I+SK+
Sbjct: 122 MAGNKSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKT 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ A ST+P +G TINV D S K+ GCCS
Sbjct: 182 LAAQEAAANSTVPGQGTTINVADASGNTKK-GCCS 215
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/220 (67%), Positives = 182/220 (82%), Gaps = 6/220 (2%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
+GY+ +EEYDYLFK+VLIGDSGVGKSNLLSRF ++EF+LE++STIGVEFAT+++++D+K+
Sbjct: 3 SGYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKL 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDV+R TF N RWLRELR+HTD NI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK DLRHL AVS ED AFAE+ + METSALDATNVE AF EVL QIY +VS+
Sbjct: 123 MLVGNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRN 182
Query: 182 AVEAGSNGTASTLPSKGETINV---KDDSSVLKRIGCCSN 218
A++ G + A P +G+TI+V KD+ S + GCCS+
Sbjct: 183 ALDIGDDPAA---PPRGKTIDVSAAKDEVSPVNAGGCCSS 219
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/215 (68%), Positives = 180/215 (83%), Gaps = 3/215 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
KPD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+++D K +KA
Sbjct: 4 KPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D NI++ML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DLRHL +V TED KAF E+E L F+ETSAL+ATNVE AF +LT+IY IVSK+A+
Sbjct: 124 GNKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKAL- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSS-VLKRIGCCSN 218
A +G A+ P+ G I V + + K+ CCS+
Sbjct: 183 ASEDGPAAA-PTSGTAIKVTEAAPEAKKKSTCCSS 216
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 309 bits (791), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 183/219 (83%), Gaps = 6/219 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
GY+ +EEYDYLFK+VLIGDSGVGKSNLLSRF ++EF+LE++STIGVEFAT+++R+D+++V
Sbjct: 9 GYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLV 68
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR TF+N RWL+ELR+HTD NI+VM
Sbjct: 69 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVM 128
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AV ED +AFAE + METSAL+ATNVE AFTEVL QIY++VS+ A
Sbjct: 129 LVGNKADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNA 188
Query: 183 VEAGSNGTASTLPSKGETINV--KDDS-SVLKRIGCCSN 218
++ G + A P +G TI+V KDD+ + + GCCS+
Sbjct: 189 LDIGDDPAA---PPRGRTIDVSAKDDAVTPVNSSGCCSS 224
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
GNK+DL HL AVS +DG A +E+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A+
Sbjct: 123 AGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A +++P +G TINV D S K+ GCCS
Sbjct: 183 AAQEATAGASVPGQGTTINVADTSGNTKK-GCCS 215
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/215 (68%), Positives = 176/215 (81%), Gaps = 1/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L++D K V
Sbjct: 2 GHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL+HL AV EDG A AE+E L F+ETSAL+ATN+E AF +LT+IY I+SK+A
Sbjct: 122 MAGNKSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ A ST+P +G TINV D S + GCCS
Sbjct: 182 LAAQEAAANSTVPGQGTTINVADASGNTSK-GCCS 215
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/220 (66%), Positives = 181/220 (82%), Gaps = 6/220 (2%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
+GY+ +EEYDYLFK+VLIGDSGVGKSNLLSRF ++EF+LE++STIGVEFAT+++++D+K+
Sbjct: 3 SGYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKL 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDV+R TF N RWLRE R+HTD NI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK DLRHL AVS ED AFAE+ + METSALDATNVE AF EVL QIY +VS+
Sbjct: 123 MLVGNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRN 182
Query: 182 AVEAGSNGTASTLPSKGETINV---KDDSSVLKRIGCCSN 218
A++ G + A P +G+TI+V KD+ S + GCCS+
Sbjct: 183 ALDIGDDPAA---PPRGKTIDVSAAKDEVSPVNAGGCCSS 219
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/212 (69%), Positives = 174/212 (82%), Gaps = 1/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K VKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL AV T++ K FAEQ +L F+ETSALD+TNVE AF +LT+IY+IVS+R +
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQLREP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLK-RIGCCS 217
+ + P+ ETINVK S R CC+
Sbjct: 185 AEDEVTIRPNNVETINVKPTVSTENVRRQCCN 216
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 181/219 (82%), Gaps = 6/219 (2%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
+GY+ +EEYDYLFK+VLIGDSGVGKSNLLSRF ++EF+LE++STIGVEFAT+++++D+K+
Sbjct: 3 SGYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKL 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR TF N RWLRELR+HTD NI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK DLRHL AV+ ED AFAE+ + METSALDATNV+ AF EVL QIY +VS+
Sbjct: 123 MLVGNKADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRN 182
Query: 182 AVEAGSNGTASTLPSKGETINV---KDDSSVLKRIGCCS 217
A++ G + A P +G+TI+V KD+ S + GCCS
Sbjct: 183 ALDIGEDPAA---PPRGKTIDVGAAKDEVSPVNTGGCCS 218
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK++LIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
GNK+DL HL AVS +DG A AE++ L F+ETSAL+ATN+E AF +LT+IY IVSK+A+
Sbjct: 123 AGNKSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A +++P +G TINV D S K+ GCCS
Sbjct: 183 AAQEATAGASVPGQGTTINVADTSGNTKK-GCCS 215
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 182/213 (85%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H TF+NV RWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV+T+D + +AEQ +L F+ETSALD+TNVE AF +LT+IY++VS+R +EAG
Sbjct: 124 KSDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEAG 183
Query: 187 SNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+G + ++ +GE + V +D++ +R CS
Sbjct: 184 ESGDSPSV-GQGEKVIVSREDETKAAERKSKCS 215
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 180/216 (83%), Gaps = 3/216 (1%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
+K D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+++D K +K
Sbjct: 3 HKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H T++NV RWL+ELR+H D NI++ML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DLRHL VS +D ++FAE+E L F+ETSAL++TNVE AF +LT+IY+IVSK+A+
Sbjct: 123 VGNKSDLRHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSV-LKRIGCCSN 218
+ N T P +G I D +S LK+ GCC +
Sbjct: 183 ASEENATEG--PGQGTNIVPLDSNSPDLKKKGCCGD 216
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 176/213 (82%), Gaps = 3/213 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKA
Sbjct: 4 RVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMA 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL AVS EDG+A AE+E L F+ETSAL+A N+E AF +LT+IY I+SK+A+
Sbjct: 124 GNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A +S LP +G TINV D S+ +R CCS
Sbjct: 184 A--QEASSNLPGQGTTINVADASANQRR-SCCS 213
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 182/218 (83%), Gaps = 6/218 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y+ +EEYDYLFK+VLIGDSGVGKSNLLSRF ++EF+L+++STIGVEFAT+++++D K+V
Sbjct: 4 AYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+N RWL ELR+HTD NI+VM
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVM 123
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AV E+ +AFAE+ + METSAL++TNVE AFTEVL +IY++VSK+A
Sbjct: 124 LVGNKADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKKA 183
Query: 183 VEAGSNGTASTLPSKGETINV---KDDSSVLKRIGCCS 217
++ G + A P +G+TINV KD+ S + GCCS
Sbjct: 184 LDIGDDPAA---PPRGKTINVGAAKDEVSPVNTGGCCS 218
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 179/215 (83%), Gaps = 2/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
+K D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+++D K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H T++NV RWL+ELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL+HL VST+D +AF+E+E L F+ETSAL++TNVE AF +LT+IY+IVSK+A
Sbjct: 122 LVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ + N T P +G I D ++ + GCCS
Sbjct: 182 LASEENTTEG--PGQGTNIVPLDSNAPDLKKGCCS 214
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 180/214 (84%), Gaps = 3/214 (1%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
+K D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+++D K +K
Sbjct: 3 HKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H T++NV RWL+ELR+H D NI++ML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL+HL VST+D +AF+E+E L F+ETSAL++TNVE AF +LT+IY+IVSK+A+
Sbjct: 123 VGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSV-LKRIGCC 216
+ N T P +G I D ++ LK+ GCC
Sbjct: 183 ASEENTTEG--PGQGTNIVPLDSNAPDLKKKGCC 214
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 178/217 (82%), Gaps = 2/217 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVST+D + AE+E+L F+ETSAL+A NVE AF +L IY+I+SK+A
Sbjct: 122 MAGNKSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDS-SVLKRIGCCSN 218
+ A + ++LP G TINV + S SV K+ CCSN
Sbjct: 182 LAAQGAASTTSLP-HGTTINVSNMSGSVEKKSACCSN 217
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 180/214 (84%), Gaps = 1/214 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PDEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED +++AE+E L F+ETSAL+A NVE AF +L++IY+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSI- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ TA+ +G+TI+V S + CCS+
Sbjct: 183 SSDQTTANASIKEGQTIDVAATSESTAKKPCCSS 216
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 178/216 (82%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+++++ K V
Sbjct: 2 AYKVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L GNK+DL HL AVS++D + AE+E+L F+ETSAL+A NVE AF +L IY+I+SK+A
Sbjct: 122 LAGNKSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A + + +++P G TINV + S +++ CCSN
Sbjct: 182 LAAQESASTTSVP-HGTTINVSNMSGTVEKKSCCSN 216
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 173/213 (81%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+ID K VKA
Sbjct: 4 RVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMA 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DL+HL AVS EDG+ AE+E L F+ETSAL+ATN+E AF +LT+IY I+SK+A+
Sbjct: 124 GNKCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKKALA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A ++ LP +G TINV D S + CCS
Sbjct: 184 AQEAAASTALPGQGTTINVNDASGNQNKKTCCS 216
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 180/214 (84%), Gaps = 3/214 (1%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
+K D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+++D K +K
Sbjct: 3 HKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H T++NV RWL+ELR+H D NI++ML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL+HL VST+D ++F+E+E L F+ETSAL++TNVE AF +LT+IY+IVSK+A+
Sbjct: 123 VGNKSDLKHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSV-LKRIGCC 216
+ N T P +G I D ++ LK+ GCC
Sbjct: 183 ASEENTTEG--PGQGTNIVPLDSNAPDLKKKGCC 214
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 178/215 (82%), Gaps = 2/215 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K +K
Sbjct: 3 HRMDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL HL +V+ EDG+A AE+E L F+ETSAL+A NVE AF VL+ I++I+SK+A+
Sbjct: 123 VGNKSDLNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
A S P +G TIN+ D S+ KR GCCS+
Sbjct: 183 -AAQEAAGSGPPGQGTTINIADPSANTKR-GCCSS 215
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/168 (86%), Positives = 161/168 (95%), Gaps = 1/168 (0%)
Query: 1 MAG-YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MAG Y+ +++YDYLFKLVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL +D
Sbjct: 1 MAGRYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDA 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR +TF+N RWLRELR+HTDPNI
Sbjct: 61 KVLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNI 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 167
+VMLIGNK+DLRHLVAVST+DGKAFAE+ESLYFMETSAL+ATNVENAF
Sbjct: 121 VVMLIGNKSDLRHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 177/216 (81%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVY +T+ TF+NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVS+ED + AE+ESL F+ETSAL+A NVE AF +L IY+I+S++A
Sbjct: 122 MAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A + ++LP G TINV + SS +++ CCSN
Sbjct: 182 LAAQEAASTTSLP-HGTTINVSNLSSNVEKKTCCSN 216
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 175/213 (82%), Gaps = 3/213 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKA
Sbjct: 4 RIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++M+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMA 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL HL +V+ EDG++ AE+E L F+ETSAL+ATN+E AF +L++IY I+SK+A+
Sbjct: 124 GNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A A LP +G IN+ DSS R GCCS
Sbjct: 184 AQE--AAGNLPGQGTAINIS-DSSATNRKGCCS 213
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 173/213 (81%), Gaps = 6/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+ YDYLFK+VLIGDSG GKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K VKAQI
Sbjct: 222 ESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQI 281
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 282 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGN 341
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 342 KSDLRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSS 401
Query: 187 SNGTASTLPSKGETINVK---DDSSVLKRIGCC 216
+ PS GETI V+ DD K+ GCC
Sbjct: 402 DDVIK---PSGGETITVQPSADDGGATKKNGCC 431
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 177/215 (82%), Gaps = 2/215 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+I+ K +K
Sbjct: 3 HRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL HL +V EDG+A AE+E L F+ETSAL+A NVE AF VL+ I++I+SK+A+
Sbjct: 123 VGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
A S P +G TINV D S+ +K GCCS+
Sbjct: 183 -AAQEAAGSGPPGQGTTINVADSSANMKG-GCCSS 215
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 177/216 (81%), Gaps = 8/216 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K VKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL AV T++ K FAEQ +L F+ETSALD+TNVE AF +LT+IY+IVS++++
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSLPDS 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIG----CCSN 218
N A P G TI++ S+V + G CC+N
Sbjct: 185 GNSGAG--PDDGSTIDIG--STVTENSGNKKPCCNN 216
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 179/214 (83%), Gaps = 3/214 (1%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
+K D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+++D K +K
Sbjct: 3 HKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H T++NV RWL+ELR+H D NI++ML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL+HL V T+D +AF+E+E L F+ETSAL++TNVE AF +LT+IY+IVSK+A+
Sbjct: 123 VGNKSDLKHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSV-LKRIGCC 216
+ + T P +G I D +S LK+ GCC
Sbjct: 183 ASEESTTEG--PGQGTNIVPLDSNSPDLKKKGCC 214
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 176/214 (82%), Gaps = 2/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+I+ K +K
Sbjct: 3 HRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL HL +V EDG+A AE+E L F+ETSAL+A NVE AF +L+ I++I+SK+A+
Sbjct: 123 VGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A S P++G TINV D S K+ GCCS
Sbjct: 183 -AAQEAAGSGPPTQGTTINVADSSGNTKK-GCCS 214
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 180/214 (84%), Gaps = 1/214 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PDEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED +++AE+E L F+ETSAL+A NVE AF +L+++Y+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSI- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ TA+ +G+TI+V S + CCS+
Sbjct: 183 SSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 174/216 (80%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVSTED ++ AE+E L F+ETSAL+A NVE AF +L IY I+SK+A
Sbjct: 122 MAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A +++ LP +G TINV + SS CCSN
Sbjct: 182 LAAQEANSSTGLP-QGTTINVSNMSSNAGNRSCCSN 216
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 177/215 (82%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
+K D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEF+T++L+++ K VK
Sbjct: 3 HKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++++
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
IGNK+DL HL +VS +DG+ AE+E L F+ETSALDATN++ AF +LT+IY I+SK+A+
Sbjct: 123 IGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
A + T P +G TINV D S R GCCS+
Sbjct: 183 AAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 174/216 (80%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L GNKTDL HL +VS ED + AE+E L +ETSAL+A+NVE AF +L IY+I+SK+A
Sbjct: 122 LAGNKTDLNHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A ++ LP +G TIN+ + S+ + + CCSN
Sbjct: 182 LAAQEAANSTGLP-QGTTINIGNLSTNINKKACCSN 216
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/216 (67%), Positives = 177/216 (81%), Gaps = 8/216 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLF++VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K VKAQI
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL AV T++ K FAEQ +L F+ETSALD+TNVE AF +LT+IY+IVS++++
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSLPDS 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIG----CCSN 218
N A P G TI++ S+V + G CC+N
Sbjct: 185 GNSGAG--PDDGSTIDIG--STVTENSGNKKPCCNN 216
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 176/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+I+ K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +V EDG+A AE+E L F+ETSAL+A NVE AF +L I++I+SK+A
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A S P++G TINV D + KR GCCS+
Sbjct: 182 L-AAQEAAGSGPPTQGTTINVTDSAVNTKR-GCCSS 215
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 179/211 (84%), Gaps = 4/211 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VLIGDSGVGK+NLLSRFT+NEFNLESKSTIGVEFATRS+++D K++KAQI
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H+T+++V RWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K FA L F+ETSALDATNV+ +F ++LT+IY+IVS +A+E+
Sbjct: 124 KSDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALESS 183
Query: 187 SNGTASTLPSKGETINV-KDDSSVLKRIGCC 216
+N + P+ G+TI V + K+ GCC
Sbjct: 184 NN---TIKPTSGQTILVSQTPDEQTKQGGCC 211
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 175/213 (82%), Gaps = 1/213 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKA
Sbjct: 4 RIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++M+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIMMA 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL HL ++S EDG++ AE+E L F+ETSAL+A+N+E AF +L++IY IVSK+A+
Sbjct: 124 GNKSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKALA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A + +P +G IN+ D + +R GCCS
Sbjct: 184 AQEAAGSMAVPGQGTAINISDTYATNRR-GCCS 215
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 174/216 (80%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF L+SKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L GNK+DL HL +VS ED + AE+E L F+ETSAL+A+NVE AF +L IY+I+SK+A
Sbjct: 122 LAGNKSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A ++ LP +G TI + + SS + + CCSN
Sbjct: 182 LTAQEAANSTGLP-QGTTITIANLSSNINKRACCSN 216
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 178/216 (82%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+ID K V
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF NV RWLRELR+H D NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +V ED +AF+E+ESL F+ETSAL+A NVE AF VL++I++IVSK+A
Sbjct: 122 MVGNKSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A + +A+ +G TINV + S+ K CCS+
Sbjct: 182 LAAQESASANGRSMQGTTINVAEPSTNTKG-SCCSS 216
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 180/214 (84%), Gaps = 1/214 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+P+EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED +++AE+E L F+ETSAL+A NVE AF +L++IY+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSI- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ +A+ +G+TI+V S + CCS+
Sbjct: 183 SSDQASANANVKEGQTIDVAASSESNTKKPCCSS 216
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/216 (65%), Positives = 176/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+I+ + +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +V EDG+A AE+E L F+ETSAL+A NVE AF +L I++I+SK+A
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A S P++G TINV D + KR GCCS+
Sbjct: 182 L-AAQEAAGSGPPTQGTTINVTDSAVNTKR-GCCSS 215
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 175/212 (82%), Gaps = 3/212 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ SL F+ETSALD+TNVE AF +LT+IY IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIR-D 183
Query: 187 SNGTASTLPSKGETINVKD--DSSVLKRIGCC 216
S G + + +TI V D+ K++ CC
Sbjct: 184 SPGDDESPSTNVQTITVAPTTDADTKKKLACC 215
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 173/213 (81%), Gaps = 6/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+ YDYLFK+VLIGDSG GKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K VKAQI
Sbjct: 4 ESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ KAFA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 124 KSDLRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSS 183
Query: 187 SNGTASTLPSKGETINVK---DDSSVLKRIGCC 216
+ PS GETI V+ DD K+ GCC
Sbjct: 184 DDVIK---PSGGETITVQPSADDGGQTKKNGCC 213
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 175/213 (82%), Gaps = 5/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++DNK +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K FAE+ +L F+ETSALD+TNVE AF ++LT+IYKIVS++ + G
Sbjct: 125 KSDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNIRDG 184
Query: 187 SNGTASTLPS---KGETINVKDDSSVLKRIGCC 216
NG S PS K TI + + CC
Sbjct: 185 GNGEDS--PSSDVKPITIPPTHGYTEPNKRKCC 215
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 174/213 (81%), Gaps = 2/213 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQKQIHDS 184
Query: 187 SNGTASTLPSKGETINVKD--DSSVLKRIGCCS 217
+ S + +TI+V D KR+ CC+
Sbjct: 185 PSSDGSHPSNNVQTIHVAPTTDDDRKKRVQCCN 217
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 176/214 (82%), Gaps = 7/214 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK VLIGDSGVGKSNLL RFT+NEFN+ESKSTIGVEFATR++ +DNK +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ ++F NVGRWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
KTDL HL AVSTE+ +AFA + +L F+ETSA+DA+NVE AF VLT+I++IVS RA+E G
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAMEGG 183
Query: 187 SNGTASTLPSKGETINVKD---DSSVLKRIG-CC 216
G PS G+T+N+ DS K G CC
Sbjct: 184 DEGAH---PSAGQTLNIAPTIGDSGKSKSSGQCC 214
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 172/216 (79%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVS ED + AE+E L F+ETSAL+A N+E AF +L IY I+SK+A
Sbjct: 122 MAGNKSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A ++ LP +G TINV + S + + CC+N
Sbjct: 182 LAAQEAANSTGLP-QGTTINVANLSGNVNKRPCCTN 216
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/212 (67%), Positives = 176/212 (83%), Gaps = 4/212 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ +L F+ETSALD+TNVE AF +LT+IYKIVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDS 184
Query: 187 SNGTASTLPSKG-ETINV-KDDSSVLKRIGCC 216
+ S PS +TI V D+S K+ CC
Sbjct: 185 PDDENS--PSNNVQTITVAPTDNSADKKQKCC 214
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 180/215 (83%), Gaps = 3/215 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PDEEYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED +++AE+E L F+ETSAL+ATNV+ AF +L++IY+I+SK+ +
Sbjct: 124 GNKTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKTL- 182
Query: 185 AGSNGTASTLPSK-GETINVKDDSSVLKRIGCCSN 218
S +A+ + K G+TI V K+ CCS+
Sbjct: 183 -SSEESAAPVSVKDGKTIVVGGPDPSTKKTTCCSS 216
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 138/197 (70%), Positives = 172/197 (87%), Gaps = 3/197 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK VLIGDSGVGKSNLL RFT+NEFN+ESKSTIGVEFATR++ +DNK +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ ++F NVGRWL+ELREH D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
KTDL HL AVSTE+ +AFA + +L F+ETSA+DA+NVE AF VLT+I++IVS R++EAG
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAG 183
Query: 187 SNGTASTLPSKGETINV 203
+G P+ G+T+N+
Sbjct: 184 DDGVH---PTAGQTLNI 197
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 173/213 (81%), Gaps = 6/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+ YDYLFK+VLIGDSG GKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K VKAQI
Sbjct: 4 ESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 124 KSDLRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSS 183
Query: 187 SNGTASTLPSKGETINVK---DDSSVLKRIGCC 216
+ PS GETI V+ DD K+ GCC
Sbjct: 184 DDVIK---PSGGETITVQPSADDGGQTKKNGCC 213
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/221 (65%), Positives = 179/221 (80%), Gaps = 8/221 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA + DE YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S+ + K
Sbjct: 1 MASPREDE-YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGK 59
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H TF+NV RWL+ELR+H D N +
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTV 119
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL AVSTE+ AFAE+ +L F+ETSAL+AT V+ AF +LT+IYK++S+
Sbjct: 120 IMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSR 179
Query: 181 RAVEAGSNGTASTLPSKGETI-----NVKDDSSVLKRIGCC 216
+ ++A N TAS LP+ G +I N + K+ GCC
Sbjct: 180 KTIQAEENATAS-LPT-GNSIAITAENTTESQKKKKKSGCC 218
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 28 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 87
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 88 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 147
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 148 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 207
Query: 187 SNGTASTLPSKGETINVKDD-SSVLKRIGCC 216
G + P E I+VK +S R CC
Sbjct: 208 PEGD-TIRPQNVEPIDVKPTMNSEGMRKPCC 237
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 177/211 (83%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE+AF ++LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQKQIRND 184
Query: 187 SNGTASTLPSKGETINV-KDDSSVLKRIGCC 216
++ S + I++ DSS ++ CC
Sbjct: 185 TDNDPSPSGDNVKPISIAPTDSSDTRKKQCC 215
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 174/210 (82%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ KAFA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
A+ G ++ D S K CC
Sbjct: 183 DGPQATIGAGPGISLTKPADDSAEKSGKCC 212
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 176/211 (83%), Gaps = 4/211 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGK+NLLSRFT+NEFNLESKSTIGVEFATRS+++DNK VKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ ++ T++NV RWL+ELR+H D NI+VML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA L F+ETSALD++NVE AF +LT+IY+IVS +A+E+
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESS 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKR-IGCC 216
++ P+ G+TINV + K+ GCC
Sbjct: 184 ND---VIRPTAGQTINVNQPTEDEKQGGGCC 211
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 174/211 (82%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYDYLFK+VLIGDSGVGKSNLLSRFTKN F L+SKSTIGVEFATR+L+++NK++KAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+NV RWL+ELR+H D NI+VMLIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
TDLRHL +V+ ED +FAE E L+F+ETSALDATNVE AF VL +IY+I+SK+ + +
Sbjct: 133 TDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLSSEE 192
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+G S +G++I V +S CCS+
Sbjct: 193 SGLGSGNLREGQSIQVSATNSGALTSRCCSS 223
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDD-SSVLKRIGCC 216
G + P E I+VK +S R CC
Sbjct: 185 PEGD-TIRPQNVEPIDVKPTMNSEGMRKQCC 214
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 39 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 98
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 99 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 158
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 159 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 218
Query: 187 SNGTASTLPSKGETINVKDD-SSVLKRIGCCS 217
G + P E I+VK +S R CC
Sbjct: 219 PEGD-TIRPQNVEPIDVKPTMNSEGMRKQCCQ 249
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/221 (65%), Positives = 180/221 (81%), Gaps = 8/221 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA + DE YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S+ + K
Sbjct: 1 MASPREDE-YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGK 59
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H TF+NV RWL+ELR+H D N +
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTV 119
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL AVSTE+ AFAE+ +L F+ETSAL+AT V++AF +LT+IYK++S+
Sbjct: 120 IMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSR 179
Query: 181 RAVEAGSNGTASTLPSKGETI-----NVKDDSSVLKRIGCC 216
+ ++A N +AS LP+ G +I N + K+ GCC
Sbjct: 180 KTIQAEENASAS-LPT-GNSIAITAENTTESQKKKKKSGCC 218
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 181/214 (84%), Gaps = 2/214 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED +++AE+E L F+ETSAL+ATNVE AF +L++IY+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLN 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A+ + +G+TI V + + K+ CCS+
Sbjct: 184 SEEPAAANNIK-EGKTIVVGESEANTKK-ACCSS 215
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDD-SSVLKRIGCC 216
G + P E I+VK +S R CC
Sbjct: 185 PEGD-TIRPQNVEPIDVKPTMNSEGMRKQCC 214
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 173/210 (82%), Gaps = 6/210 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H+T++NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AVSTE+ KAFA ++ L F+ETSALDA+NVE+AF +LT IY+IVS +++E+ +
Sbjct: 127 LKHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD- 185
Query: 190 TASTLPSKGETINV---KDDSSVLKRIGCC 216
PS GETI V DD + CC
Sbjct: 186 --VIKPSGGETILVTPTADDGGAKQGGKCC 213
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 177/214 (82%), Gaps = 3/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PDEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED + FAE+E L F+ETSAL+ATNVE AF +L +IY+I+SK+ +
Sbjct: 124 GNKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTL- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
S+ A +G+T+ V D S + CCS+
Sbjct: 183 -SSDDPAPAGIKEGKTL-VVDGSDTNTKKTCCSS 214
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDD-SSVLKRIGCC 216
G + P E I+VK SS R CC
Sbjct: 185 PEGD-TIRPQNVEPIDVKPTMSSEGMRKQCC 214
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 174/210 (82%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ KAFA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
A+ G ++ D S K CC
Sbjct: 183 DGPQATIGAGPGISLTKPADDSAEKGGKCC 212
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PD+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++++D K +KA
Sbjct: 4 RPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ AT++NV RWL+ELR+H D NI++ML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL V+T+D + F+E+E L F+ETSAL+ATNVE AF +LT+IY+IVSK+A+
Sbjct: 124 GNKSDLKHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKKAL- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSV-LKRIGCCS 217
S P +G+ I V + K+ CCS
Sbjct: 183 -ASEDPVLVGPGEGKAIIVGPEQDANTKKKACCS 215
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 6/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++N+ RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV-EA 185
K DLRHL AV T++ K FAE+ +L F+ETSALD+TNVE AF +LT+IY IVS++ + +A
Sbjct: 125 KCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIKDA 184
Query: 186 GSNGTASTLP-SKGETINVKDDSSVLKRIGCC 216
N S+ P G T+ DS V K+ CC
Sbjct: 185 PQNSEISSQPIVVGPTV----DSDVKKKPQCC 212
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 170/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G PS E I+VK + R CC
Sbjct: 185 PEGDV-IRPSNVEPIDVKPTVTADVRKQCC 213
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 174/213 (81%), Gaps = 6/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+ YDYLFK+VLIGDSG GKSNLLSRFT+NEF+L+S+STIGVEFATRS+ +D K +KAQI
Sbjct: 4 ESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ NV RWL+ELR+H D NI+VML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ KAFA + +L F+ETSALDA+NVE AF +LT+IY IVS +A+++
Sbjct: 124 KSDLRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSS 183
Query: 187 SNGTASTLPSKGETINVK---DDSSVLKRIGCC 216
+ PS GETI+V+ DD K+ GCC
Sbjct: 184 DD---VIKPSGGETISVQPSTDDGGQTKKGGCC 213
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 168/216 (77%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK DL HL AVS ED + AE+E L F+ETSAL+A NVE AF +L IY I+SK+A
Sbjct: 122 MAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A + LP G TINV + S + CCSN
Sbjct: 182 LAAQEATSNPGLP-HGTTINVANISGNYNKRSCCSN 216
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 178/214 (83%), Gaps = 3/214 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + DEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S++ + K +
Sbjct: 2 GSRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H+TF+NV RWL+ELR+H + NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DLRHL AV T++ AF+EQ +L F+ETSALDA+ V+ +F +LT+IY+++S+R
Sbjct: 122 LVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSRRN 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ A G L S G+TI++ +D+ R CC
Sbjct: 182 MAAEEGGNQPQL-STGQTISLNNDNK--PRRNCC 212
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 176/211 (83%), Gaps = 4/211 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGK+NLLSRFT+NEFNLESKSTIGVEFATRS+++DNK VK+QI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ ++ T++NV RWL+ELR+H D NI+VML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA L F+ETSALD++NVE AF +LT+IY+IVS +A+E+
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESS 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKR-IGCC 216
++ P+ G+TINV + K+ GCC
Sbjct: 184 ND---VIRPTAGQTINVNQPTEDEKQGGGCC 211
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 179/216 (82%), Gaps = 6/216 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S++ + K +KA
Sbjct: 3 RSDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++ +F V +WL+ELR+H D NI++ML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL AVSTE+GK FAE+ SL F+ETSALDATNVE AFT++LT+IY+IV K+A+
Sbjct: 123 GNKSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALT 182
Query: 185 AGSNGTASTLPSKGETINVKD---DSSVLKRIGCCS 217
N S P+ GE++ V+D D K+ CCS
Sbjct: 183 NEKN--PSFKPALGESVVVRDPAEDKGTHKK-KCCS 215
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 172/213 (80%), Gaps = 2/213 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++M +GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQKQIHDS 184
Query: 187 SNGTASTLPSKGETINVKD--DSSVLKRIGCCS 217
S + +TI+V D KR+ CC+
Sbjct: 185 PTSDGSHPSNNVQTIHVAPTTDEDRRKRVQCCN 217
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 177/213 (83%), Gaps = 3/213 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+++++ K +KA
Sbjct: 4 RTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NVGRWL+ELR+H D NI++ML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL VSTED ++FAE+E L F+ETSAL+ATNVE AF +L +I++I+SK+A+
Sbjct: 124 GNKSDLKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKAL- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
S A +G+TI V D + K+ CCS
Sbjct: 183 -ASEEAAGAGIKEGKTIVVADPDTNTKK-ACCS 213
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/212 (66%), Positives = 176/212 (83%), Gaps = 2/212 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++++D K +KA
Sbjct: 4 KVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T++ATF NV RWLRELR+H D NI++ML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL H+ AV +D + FAE+E L FMETSAL++TNVE +F +LT+IY+IV ++++
Sbjct: 124 GNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
A +A PS+G INV D ++ K+ CC
Sbjct: 184 AEEAASAG--PSQGTPINVSDAETIAKKRSCC 213
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+G A L + +++ + GCC
Sbjct: 183 DSGQAG-LGDRRPVVDINPSQDPETKQGCC 211
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 173/210 (82%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K+FA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
AS ++ D S K CC
Sbjct: 183 DGAQASIGTGPSIALSKPADDSAEKSGKCC 212
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 178/215 (82%), Gaps = 3/215 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ +EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED + +AE+E L F+ETSAL+ATNVENAF +L +IY+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKSL- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSV-LKRIGCCSN 218
SN A+ + +G+TI V + CC++
Sbjct: 183 -SSNDPAANIIKEGKTITVGGAPEPNTNKPSCCTS 216
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 171/212 (80%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVL-KRIGCCS 217
G + P E I VK + R CC
Sbjct: 185 PEGD-TIRPQNVEQIEVKPTMNAEGMRKQCCQ 215
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 176/211 (83%), Gaps = 1/211 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A++
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G G+ + L + + + + + ++ GCC
Sbjct: 182 GE-GSQNVLGGERKVLEISKSADAEQKKGCC 211
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 177/214 (82%), Gaps = 3/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ DEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S++ + K +KA
Sbjct: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TF+NV RWL+ELR+H + NI+VML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DLRHL AV T++ AF+EQ +L F+ETSALDA+ V+ AF +LT+IY+++S+R +
Sbjct: 124 GNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
A A L S G+TI++ ++ R CC+N
Sbjct: 184 AEDGANAPQLSS-GQTISLNAENK--PRRNCCNN 214
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 140/210 (66%), Positives = 170/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL +V T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G PS E I+VK + R CC
Sbjct: 185 PEGDV-IRPSNVEPIDVKPTVTADVRKQCC 213
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 178/214 (83%), Gaps = 3/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PDEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED + +AE+E L F+ETSAL+ATNVE AF +L++IY+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLT 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A+ +G+ I V + K+ CCS+
Sbjct: 184 SEEPAPANI--KEGKMIVVGGSEANTKK-PCCSS 214
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 175/211 (82%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF ++LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQKQIRND 184
Query: 187 SNGTASTLPSKGETINV-KDDSSVLKRIGCC 216
++ S + I++ DSS ++ CC
Sbjct: 185 ADNDPSPSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 171/210 (81%), Gaps = 2/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EEYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 4 EEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HA+++NV RWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL+HL AV E+ FAE+ SL F+ETSALD+TNVE AF +LT IY++VS+R+++AG
Sbjct: 124 KSDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKAG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ T PS + D S+ G C
Sbjct: 184 ESD--KTTPSDTIVVGPTDSSTTETSKGGC 211
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 175/211 (82%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ KAFA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G A+ +++ D + K CC
Sbjct: 182 GDGAQANIAAGTSLSLSKPADENADKGGKCC 212
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ KAFAE+ L F+ETSALD+TNV+ AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDD-SSVLKRIGCC 216
G + P E I+VK SS R CC
Sbjct: 185 PEGD-TIRPQNVEPIDVKPTMSSDSVRKQCC 214
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 176/219 (80%), Gaps = 10/219 (4%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
+KPD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+++D K +K
Sbjct: 3 HKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D NI++ML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL+HL V TE +AF E+E L F+ETSAL++TNVE AF ++LT+IY IVSK+ +
Sbjct: 123 VGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVL 182
Query: 184 EAGSNGTASTLPSKGE-----TINVKDDSSVLKRIGCCS 217
++ N P GE I+ D K+ GCCS
Sbjct: 183 DSEDN-----RPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 173/210 (82%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TED K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A++ G
Sbjct: 123 KSDLRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G + L + + + + + GCC
Sbjct: 183 EGG-QNPLGERRQVVEISKTQDTETKQGCC 211
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 173/215 (80%), Gaps = 5/215 (2%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
+K D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS+++D K +K
Sbjct: 3 HKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D NI++ML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DLRHL +V T+D +AF E+E L F+ETSAL++TNVE AF +LT+IY IVSK+A+
Sbjct: 123 VGNKSDLRHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKD-DSSVLKRIGCCS 217
+ P KG I V + K+ CCS
Sbjct: 183 ASEDKPQ----PDKGTRIVVSETQPEEKKKSACCS 213
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 174/213 (81%), Gaps = 4/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM--- 181
Query: 187 SNGTASTLPSKGETINVKDDSSVLK-RIGCCSN 218
S S + +N++ + K ++ CC N
Sbjct: 182 SERQESDMSPSNNVVNIQVQPTENKPKMQCCQN 214
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 171/212 (80%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVL-KRIGCCS 217
G + P E I VK + R CC
Sbjct: 185 PEGD-TIRPHNVEQIEVKPTMNAEGMRKQCCQ 215
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 175/214 (81%), Gaps = 4/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ DEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S++ + K +KA
Sbjct: 4 RVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TF+NV RWL+ELR+H + NI+VML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DLRHL AV T++ AF+EQ +L F+ETSALDA+ V+ AF +LT+IY+++S+R ++
Sbjct: 124 GNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMQ 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
A N A S G I++ K+ GCC+
Sbjct: 184 AEENANAPM--SAGHKISLSQSGD--KKKGCCAQ 213
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 179/212 (84%), Gaps = 2/212 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED +++AE+E L F+ETSAL+ATNVE AF +L++IY+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLN 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ A+ + +G+TI V + + K+ CC
Sbjct: 184 SEEPAAANNIK-EGKTIVVGESEANTKK-ACC 213
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 142/214 (66%), Positives = 173/214 (80%), Gaps = 3/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K +EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KA
Sbjct: 4 KDSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DLRHL AV T+D K+FAE+ +L F+ETSALDATNVE AF +LT+IY IVS++ +
Sbjct: 124 GNKSDLRHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKTI- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSV--LKRIGCC 216
+ A S +TI V + K+ GCC
Sbjct: 183 VNDDHVAKVPTSNVQTITVAPSEATDDKKKGGCC 216
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KA+AE+ L F+ETSALD+TNVE AFT +LT+IYK VS + V
Sbjct: 125 KSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVGGD 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ ST S G I+ + K+ CCS+
Sbjct: 185 NRAAISTPGSNGIVISPTAEPQTKKQ--CCSS 214
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 177/216 (81%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ + EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+ID K V
Sbjct: 131 AHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 190
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F +V RWLRELR H D NI+VM
Sbjct: 191 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 250
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +V EDG+AF+E+E L F+ETSAL+A NVE AF +L++I++ VSK+A
Sbjct: 251 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 310
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A ++ + + +G TINV + S+V K CCS+
Sbjct: 311 LAAQASASTNGRSMQGTTINVAESSTVTK-GSCCSS 345
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL++KSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+G A L + +++ + GCC
Sbjct: 183 DSGQAG-LGDRRPVVDINPSQDPETKQGCC 211
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 175/211 (82%), Gaps = 1/211 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ KAFA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G +G +T+ + K + GCC
Sbjct: 182 G-DGAQATIGAGTNISLSKPAEDATAKSGCC 211
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 175/211 (82%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF ++LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQKQIRND 184
Query: 187 SNGTASTLPSKGETINV-KDDSSVLKRIGCC 216
++ S + I++ DSS ++ CC
Sbjct: 185 ADNDPSPSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 174/213 (81%), Gaps = 4/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM--- 181
Query: 187 SNGTASTLPSKGETINVKDDSSVLK-RIGCCSN 218
S S + +N++ + K ++ CC N
Sbjct: 182 SERQESDMSPSNNVVNIQVPPTENKPKMQCCQN 214
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 175/213 (82%), Gaps = 1/213 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKA
Sbjct: 4 RVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF NV RWLRELR+H D NI+++L
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILA 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL AVS +D +A ++E L F+ETSAL+A NV+ AF +LT IY I+SK+A+
Sbjct: 124 GNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A ++ LP +G TINV D+S+ +KR GCCS
Sbjct: 184 AQEAAASTALPGQGTTINVSDNSANVKR-GCCS 215
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 175/211 (82%), Gaps = 1/211 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A++
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G G+ L + + + + + ++ GCC
Sbjct: 182 GE-GSGPVLGNDRKVLEISKSADAEQKKGCC 211
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 175/216 (81%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+I+ K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF NV RWLRELR+H D NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +V EDG AF+E+E L F+ETSAL+A NVE AF VL++I++IVSK+A
Sbjct: 122 MVGNKSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A + + + +G TINV + + K CCS+
Sbjct: 182 LAAQESASTNGRSMQGTTINVAEAPAATKG-SCCSS 216
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++++D K +KA
Sbjct: 4 KVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T++ATF NV RWLRELR+H D NI++ML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL H+ AV +D + FAE+E L FMETSAL++TNVE +F +LT+IY+IV ++++
Sbjct: 124 GNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKSLA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
A +A PS+G IN D ++ K+ CC
Sbjct: 184 AEEAASAG--PSQGTPINASDAETIAKKRSCC 213
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 174/210 (82%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A++ G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G + L + + + + + + GCC
Sbjct: 183 DAGQ-TVLGDRRDMVRIDESEDPKTKQGCC 211
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 176/216 (81%), Gaps = 9/216 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 184 -EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
E ++ + + +P I+V + ++ CC N
Sbjct: 230 RENDTSPSNNVVP-----IHVPPTTENKPKVQCCQN 260
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 175/212 (82%), Gaps = 5/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ KAFA + L F+ETSA DA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKD--DSSVLKRIGCC 216
++P G I + + + S K CC
Sbjct: 183 D---TPSMPQTGTNIALSNPTEDSAAKNGKCC 211
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 175/213 (82%), Gaps = 6/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ + FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVK---DDSSVLKRIGCC 216
G + P+ E I+VK + SV K+ CC
Sbjct: 185 PEGD-TIRPTNVEAIDVKPTVNTDSVRKQ--CC 214
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 177/216 (81%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ + EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+ID K V
Sbjct: 2 AHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F +V RWLRELR H D NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +V EDG+AF+E+E L F+ETSAL+A NVE AF +L++I++ VSK+A
Sbjct: 122 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A ++ + + +G TINV + S+V K CCS+
Sbjct: 182 LAAQASASTNGRSMQGTTINVAESSTVTKG-SCCSS 216
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++DNK VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+EL++H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA- 185
K DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF ++LT IY IVS++ + +
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSE 184
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G N + + + TI D + K+ C
Sbjct: 185 GDNDPSPSRDNIPITIAPTDPTDNRKKSCAC 215
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 173/211 (81%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ KAFA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G A+ +++ D K CC
Sbjct: 182 GDGAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 170/215 (79%), Gaps = 2/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVS +D + AE+E L F+ETSAL+A NVE AF +L IY I+SK+A
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ A + LP G TINV D S + + CCS
Sbjct: 182 L-AAQEAASINLP-HGTTINVGDLSGNMNKRTCCS 214
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/222 (63%), Positives = 178/222 (80%), Gaps = 10/222 (4%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PD+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++ D KV+KA
Sbjct: 4 RPDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++ ++F+N RWL+ELR+H D NI++ML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL AV+TE+G+ +A+ L F+ETSALDA++VE AF +LT IY++V KR +
Sbjct: 124 GNKSDLKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLA 183
Query: 185 AGSNGTASTL------PSKGETI---NVKDDSSVLKRIGCCS 217
+G A + +GETI N+ D+ KR CCS
Sbjct: 184 SGDPTVAKSASGAVYQAGRGETISVGNLSHDNRSSKR-KCCS 224
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/210 (66%), Positives = 169/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL +V T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G PS E I+VK + R CC
Sbjct: 185 PEGDV-IRPSNVEPIDVKPTVTADVRKQCC 213
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 173/211 (81%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV T++ KAFA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 122 NKSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G A+ +++ D K CC
Sbjct: 182 GDGAQATIGAGTNISLSKAADDEAAKGGKCC 212
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 171/207 (82%), Gaps = 2/207 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV+T++ KAF+ + L F+ETSALDA+NVE+AF +LT IY+IVS +++E+ +N
Sbjct: 127 LKHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSTNN 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCC 216
P +G ++ DS+ + CC
Sbjct: 187 IEP--PKEGISVGPSLDSTATQGSKCC 211
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 173/213 (81%), Gaps = 6/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K FAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS + +
Sbjct: 125 KSDLRHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQIRDP 184
Query: 187 SNGTASTLPSKGETINVK---DDSSVLKRIGCC 216
G + P E I+VK + SV K+ CC
Sbjct: 185 PEG-ETIRPQNVEAIDVKPTVNTESVRKQ--CC 214
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 174/210 (82%), Gaps = 2/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYDV++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+I++IVS +A+E+G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ K I DS K+ GCC
Sbjct: 183 DSSANQLGDRKVVEITKTPDSE--KKPGCC 210
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 175/211 (82%), Gaps = 2/211 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSG GKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+E
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEG 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
S G +++ + + I+++ + GCC
Sbjct: 182 ESGG--ASVGERRQIIDIEKTQDTENKGGCC 210
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 174/211 (82%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ K+FA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G + A+ +++ D K CC
Sbjct: 182 GDSAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 170/212 (80%), Gaps = 4/212 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLK--RIGCC 216
G S + E I+VK + R CC
Sbjct: 185 PEG--SVIRPNLENIDVKPTNPATDSVRKQCC 214
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/210 (66%), Positives = 169/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLES STIGVEFATRS+ +D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL +V T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G PS E I+VK + R CC
Sbjct: 185 PEGDV-IRPSNVEPIDVKPTVTADVRKQCC 213
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 170/212 (80%), Gaps = 4/212 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLK--RIGCC 216
G S + E I+VK + R CC
Sbjct: 185 PEG--SVIRPNLENIDVKPTNPTTDSVRKQCC 214
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 173/211 (81%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ K+FA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G A+ +++ D K CC
Sbjct: 182 GDGAQATIGAGTNISLSKPADDESAKSGKCC 212
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 174/210 (82%), Gaps = 2/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYDV++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+I++IVS +A+E+G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALESG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ K I DS K+ GCC
Sbjct: 183 DSSANQLGDRKVVEITKTPDSE--KKQGCC 210
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 176/214 (82%), Gaps = 5/214 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ ++ K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TED + +AE++SL F+ETSALD+TNVE AF +LT+IYKIVS++ + G
Sbjct: 124 KSDLRHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQL--G 181
Query: 187 SNGTASTLPSKGET-INVKDDS--SVLKRIGCCS 217
+ LP I+V D + + K+ GCC+
Sbjct: 182 DSDRGGDLPDNDVVDIHVPDSTPGNQRKKSGCCN 215
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 170/212 (80%), Gaps = 4/212 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLK--RIGCC 216
G S + E I+VK + R CC
Sbjct: 185 PEG--SVIRPNLENIDVKPTNPTTDSVRKQCC 214
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 187 SNGTASTLPSKG-ETINVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 230 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 260
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 174/214 (81%), Gaps = 2/214 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ +EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ VKA
Sbjct: 4 RAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED + ++E+E L F+ETSAL+ATNVE AF +L +IY+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKSL- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
SN AS + TI V S + CC++
Sbjct: 183 -SSNEPASANIKESMTITVGGPQSNASKPSCCTS 215
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 177/212 (83%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ TF+NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TED K FAE+ L F+ETSALDATNVE AF +LT+IYKIVS + + G
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNG 182
Query: 187 SNGTASTLPS-KGETINVKDDSSVLK-RIGCC 216
+G+ + G++I++ ++ + + GCC
Sbjct: 183 PSGSTEGHQNLSGQSISLSQTANDPQAKSGCC 214
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 173/211 (81%), Gaps = 6/211 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT++NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ KAF+ + +L F+ETSALDA+NVE+AF +LT IY+IVS +A+++ +
Sbjct: 127 LKHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDSSGD- 185
Query: 190 TASTLPSKGETINV---KDDSSVLKRIGCCS 217
P+ GETI V DD + CC+
Sbjct: 186 --VIKPAGGETILVAPTADDGGAKQGSKCCA 214
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 6/210 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AVST++ K FA + L F+ETSALDA+NVE+AF +LT IY+IVS +++E+ +
Sbjct: 127 LKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD- 185
Query: 190 TASTLPSKGETINV---KDDSSVLKRIGCC 216
PS GETI V DD CC
Sbjct: 186 --VIKPSGGETILVAPTADDGGAKSSSKCC 213
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 174/210 (82%), Gaps = 3/210 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A++ G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G L + K DS ++ GCC
Sbjct: 183 EGGQ-QVLDRRPVIDPSKQDSE--QKPGCC 209
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 171/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 174/210 (82%), Gaps = 3/210 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A++ G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G L + K DS ++ GCC
Sbjct: 183 EGGQ-QVLDRRPVIDPSKQDSE--QKQGCC 209
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 177/212 (83%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ TF+NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TED K FAE+ L F+ETSALDATNVE AF +LT+IYKIVS + + G
Sbjct: 123 KSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDNG 182
Query: 187 SNGTASTLPS-KGETINVKDDSSVLK-RIGCC 216
+G+ + G++I++ ++ + + GCC
Sbjct: 183 PSGSNEGHQNLSGQSISLSQTANDPQAKSGCC 214
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 171/212 (80%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ KAFAE+ L F+ETSALD+TNV+ AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLK-RIGCCS 217
G P E I+VK + R CC
Sbjct: 185 PEGDV-IRPHNVEPIDVKPTMNTDGVRKQCCQ 215
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 172/212 (81%), Gaps = 1/212 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
+EEYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D KVVKAQ
Sbjct: 4 KEEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGAL+VYD+ +H T++NV RWL+EL++H D NI++ML G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAG 123
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA-VE 184
NK DLRHL AVSTE+ K FAEQ SL F+ETSALD+TNVE AF +LT+IY IV ++A +
Sbjct: 124 NKCDLRHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQKAPAD 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G G S +K I+ + D ++ CC
Sbjct: 184 GGQGGGGSVSETKVIKIDDQKDEKSGSKMKCC 215
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 171/211 (81%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++DNK VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAV ALLVYD+ +H T++NV RWL+EL++H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA- 185
K DLRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF ++LT IY IVS++ + +
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSE 184
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G N + + + TI D + K+ C
Sbjct: 185 GDNDPSPSRDNIPITIAPTDPTDSRKKSCAC 215
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/213 (65%), Positives = 171/213 (80%), Gaps = 6/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQI
Sbjct: 3 NDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA Q L F+ETSALDA+NVE AF LT+IY+IVS +A+E
Sbjct: 123 KSDLRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIE-- 180
Query: 187 SNGTASTLPSKGETINV---KDDSSVLKRIGCC 216
G S P +G +I + K+ CC
Sbjct: 181 -QGEPSQGPGQGTSIPLGPSHPPGDASKKGQCC 212
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 174/212 (82%), Gaps = 5/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ KAFA + L F+ETSA DA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKD--DSSVLKRIGCC 216
A +P G TI + D + CC
Sbjct: 183 D---AQAIPQGGTTIPLSKTADDGAGQGGKCC 211
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 173/211 (81%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS++A++
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G + A+ +++ D K CC
Sbjct: 182 GESAQANIGAGTNISLSKPADDGAAKGGKCC 212
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 173/210 (82%), Gaps = 6/210 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ KAF+ + L F+ETSALDA+NVE AF +LT IY+IVS +A+E ++
Sbjct: 127 LKHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKALEQAAD- 185
Query: 190 TASTLPSKGETINVKD--DSSVLKRIG-CC 216
S P++G++I V+ D+ K G CC
Sbjct: 186 --SIKPTQGDSIPVRPTLDAPANKEGGKCC 213
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 12 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 71
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 131
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 132 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 191
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 192 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 224
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/220 (65%), Positives = 175/220 (79%), Gaps = 8/220 (3%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
+K D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AFKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVSTED ++ AE+E L F+ETSAL+A NV+ AF +L IY I+SK+A
Sbjct: 122 MAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIG----CCSN 218
+ A +++ LP +G TINV S++ G CCSN
Sbjct: 182 LAAQEATSSTGLP-QGTTINV---SNMAGNAGGNRSCCSN 217
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 175/219 (79%), Gaps = 4/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M G + D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K
Sbjct: 1 MGGSR-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 59
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI+
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV 119
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS+
Sbjct: 120 IMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 179
Query: 181 RAVEAGSNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
+ + S PS I+V + ++ CC N
Sbjct: 180 KQMSDRRENDMS--PSNNVVPIHVPPTTENKPKMQCCQN 216
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/220 (64%), Positives = 179/220 (81%), Gaps = 4/220 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG + +EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L ++ K
Sbjct: 1 MAGRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TF+N+ RWL+ELR+H D NI
Sbjct: 61 IIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIR 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNKTDLRHL AV+T+D ++FAE E L ++ETSAL+ATNVE AF +L IY+ +SK
Sbjct: 121 IMLVGNKTDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISK 180
Query: 181 RAVEAGSNGTASTLPSK-GETINVK--DDSSVLKRIGCCS 217
+ V + +G + K G+TINV D++ K+ CCS
Sbjct: 181 KPVASDESGQGAAGGVKEGKTINVATGGDAAAEKK-QCCS 219
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 169/210 (80%), Gaps = 6/210 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AVST++ K FA + L F+ETSALDA+NVE+AF +LT IY+IVS +++E+ +
Sbjct: 127 LKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD- 185
Query: 190 TASTLPSKGETINV---KDDSSVLKRIGCC 216
PS GETI V DD CC
Sbjct: 186 --VIKPSGGETILVAPTADDGGAKSGSKCC 213
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/216 (64%), Positives = 176/216 (81%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ + EYDYLFK+VLIGDSGVGKSN+ SRFT+NEF LESKSTIGVEFATR+L+ID K V
Sbjct: 2 AHRVNNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F +V RWLRELR H D NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +V EDG+AF+E+E L F+ETSAL+A NVE AF +L++I++ VSK+A
Sbjct: 122 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A ++ + + +G TINV + S+V K CCS+
Sbjct: 182 LAAQASASTNGRSMQGTTINVAESSTVTKG-SCCSS 216
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 172/213 (80%), Gaps = 6/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++DNK +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + L F+ETSALDA+NVE AF LT+IY+IVS +A++ G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKALDQG 182
Query: 187 SNGTASTLPSKGETINVKDDSS---VLKRIGCC 216
PS+G I + + K+ CC
Sbjct: 183 EQTAG---PSQGSAIPLSSSTPPGDATKKGQCC 212
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADC 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 140/223 (62%), Positives = 176/223 (78%), Gaps = 12/223 (5%)
Query: 6 PDEEYDYLFK------------LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR 53
++EYD+LFK +VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATR
Sbjct: 2 ANDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATR 61
Query: 54 SLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELRE 113
S++ID K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ + ++F+NV RWL+ELR+
Sbjct: 62 SIQIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRD 121
Query: 114 HTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQ 173
H D NI++ML+GNKTD RHL AVSTEDGKAFA + L F+ETSAL+ATNV+ AF E+LT
Sbjct: 122 HADSNIVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTS 181
Query: 174 IYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
IY+IVS +++ + + PS+G I++ + S ++ GCC
Sbjct: 182 IYQIVSSKSLAEEGDVSKKFDPSQGNNISLSQEKSQEEQKGCC 224
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 171/215 (79%), Gaps = 2/215 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ +++YDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVEQDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR-A 182
GNK DL HL +V+ EDG+ AE E L F+ETSAL+ATNVE AF VL +IY I+SK+
Sbjct: 123 AGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKAL 182
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ S +P +G TINV D S KR GCCS
Sbjct: 183 AAQEAAAANSAIPGQGTTINVGDTSGAGKR-GCCS 216
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPTKLQCCQN 217
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTGNKPKMQCCQN 215
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 172/215 (80%), Gaps = 2/215 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ +++YDYLFK+VLIGDSGVGK+N+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR-A 182
GNK DL HL +V+ EDG+ AE E L F+ETSAL+ATNVE AF VL +IY I+SK+
Sbjct: 123 AGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKAL 182
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ S +P +G TINV+D S KR GCCS
Sbjct: 183 AAQEAAAANSAIPGQGTTINVEDTSGAGKR-GCCS 216
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 172/211 (81%), Gaps = 7/211 (3%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YD+LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATRS+ +D K +KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
LRHL AV TE+ +AFA + +L F+ETSA+DA+NVE AF +LT IY+IVS +A+E+ ++
Sbjct: 127 LRHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSADA 186
Query: 190 TASTLPSKGETINV---KDDSSVLKRIG-CC 216
P+ G TI V DD+S G CC
Sbjct: 187 VG---PTSGSTITVTPTSDDASKASGGGKCC 214
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 142/222 (63%), Positives = 176/222 (79%), Gaps = 13/222 (5%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLR---IDNK 60
+K D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS++ +D K
Sbjct: 3 HKQDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDGK 62
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D NI+
Sbjct: 63 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANIV 122
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DL+HL V TE +AF E+E L F+ETSALD+TNVE AF ++LT+IY IVSK
Sbjct: 123 IMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVSK 182
Query: 181 RAVEAGSNGTASTLPSKGE-----TINVKDDSSVLKRIGCCS 217
+ +++ N P GE I+ + D K+ GCCS
Sbjct: 183 KVLDSEDN-----RPKIGEGRDLIVIDKQHDDGAKKKGGCCS 219
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 140/224 (62%), Positives = 174/224 (77%), Gaps = 16/224 (7%)
Query: 7 DEEYDYLFK--------------LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT 52
++EYD+LFK LVLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFAT
Sbjct: 3 NDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFAT 62
Query: 53 RSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELR 112
RS+++D+K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR
Sbjct: 63 RSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELR 122
Query: 113 EHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
+H D NI++ML+GNK+DLRHL AV T++ K FA + +L F+ETSALDA+NVE AF +LT
Sbjct: 123 DHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILT 182
Query: 173 QIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+IY+IVS +A++ G +G A S G TI V + GCC
Sbjct: 183 EIYRIVSSKALDNGDSGQAPL--SSGRTIEVSKAPDTESKQGCC 224
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 172/211 (81%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV T++ K FA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 122 NKSDLRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G A+ +++ D K CC
Sbjct: 182 GDGAQATIGAGTNISLSKAADDEASKGGKCC 212
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADC 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 173/212 (81%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKAQI
Sbjct: 9 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF NV RWL+ELR+H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
KTDL+HL AV+TED +++AE+E L F+ETSAL+ATNVE AF L +IY+I+SK+++
Sbjct: 129 KTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTA 188
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A+ +G+TI + + CC++
Sbjct: 189 NEPAAAANIKEGKTIAIGGSETTNTNKPCCTS 220
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 174/213 (81%), Gaps = 1/213 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV-EA 185
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ + E
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
++G + ++ D ++ CC N
Sbjct: 185 SAHGESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCRN 217
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 175/212 (82%), Gaps = 5/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ TF NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T+D KAFA + L F+ETSALDA+NVE AF + LT+IY+IVS +A++
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDQD 182
Query: 187 SNGTASTLPSKGETINVKDDSSV--LKRIGCC 216
++G A P +G +I + + K+ CC
Sbjct: 183 TSGPA---PGQGTSIPLSASTPAGEAKKGQCC 211
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 161/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS+R +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQRQI 181
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 175/228 (76%), Gaps = 20/228 (8%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI--------- 57
D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L++
Sbjct: 6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLLSLSLN 65
Query: 58 -DN-------KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLR 109
DN K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLR
Sbjct: 66 LDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLR 125
Query: 110 ELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTE 169
ELR+H D NI++M+ GNK+DL HL +V+ EDG++ AE+E L F+ETSAL+ATN+E AF
Sbjct: 126 ELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQT 185
Query: 170 VLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+L++IY I+SK+A+ A A LP +G IN+ DSS R GCCS
Sbjct: 186 ILSEIYHIISKKALAAQE--AAGNLPGQGTAINIS-DSSATNRKGCCS 230
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQKSNKLQCCQN 217
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 171/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 174/220 (79%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P DS R+ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DSQRGGRLQCCQN 217
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQKSSKLQCCQN 217
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 169/215 (78%), Gaps = 2/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NE LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVS +D + AE+E L F+ETSAL+A NVE AF +L IY I+SK+A
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ A + LP G TINV D S + + CCS
Sbjct: 182 L-AAQEAASINLP-HGTTINVGDLSGNMNKRTCCS 214
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQKSNKLQCCQN 217
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 173/216 (80%), Gaps = 2/216 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D+EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+ +++ K +K
Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR-A 182
GNK+DL HL +V+ EDG++ AE+E L F+ETSAL+ATNVE AF +L +IY I+SK+
Sbjct: 123 AGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKAL 182
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ S +P +G TINV D S KR CCS+
Sbjct: 183 AAQEAAAANSAIPGQGTTINVDDTSGGAKR-ACCSS 217
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 36 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 95
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 96 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 155
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 156 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 215
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 216 AAHDESPGNNVVDISVPP-------TTDGQKPNKLQCCQN 248
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 173/218 (79%), Gaps = 15/218 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G+N +LP DS ++ CC
Sbjct: 185 SGHEESPGNNVVDISLPP-------TTDSQRGGKLPCC 215
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDY+FK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 173/218 (79%), Gaps = 15/218 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G+N +LP DS ++ CC
Sbjct: 185 SGHDESPGNNVVDISLPPTT-------DSQRGGKLPCC 215
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ET+ALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 65 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 124
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 125 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 184
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 185 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 244
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 245 AAHDESPGNNVVDISVPP-------TTDGQKPSKLQCCQN 277
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS++A++ G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIG-CC 216
+ A+ T+ K G CC
Sbjct: 183 DSAQATIASGTNITLTPPPSDEAAKGGGKCC 213
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/178 (74%), Positives = 160/178 (89%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
K+DLRHL +V T++ +AFAE+ SL F+ETSALD TNVE AF +LT+IY+IVS+R +
Sbjct: 125 KSDLRHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPMH 182
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 160/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQM 181
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D +I++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 170/211 (80%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ K FA L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G A+ +++ D K CC
Sbjct: 182 GDGAQANIGAGTNISLSKPADDGSAKGGKCC 212
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 161/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQKSNKLQCCQN 217
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 161/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/220 (63%), Positives = 175/220 (79%), Gaps = 19/220 (8%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF VLT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLP--SKGETINVKDDSSVLKRIGCC 216
G+N ++P S G+ N +I CC
Sbjct: 185 SAHDESPGNNVVDISVPPTSDGQKGN---------KIQCC 215
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++++K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++N RWL+EL++H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD++NVE AF +LT IY IVS+R +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S+ S PS I V+ + K+ CC N
Sbjct: 185 SDADFS--PSSNVVPITVQPTQNASKQGACCQN 215
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 176/219 (80%), Gaps = 3/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG + +EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L ++ K
Sbjct: 1 MAGRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TF+N+ RWL+ELR+H D N
Sbjct: 61 IIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTR 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNKTDLRHL AV+T+D ++FAE E L ++ETSAL+ATNVE AF +L IY+ VSK
Sbjct: 121 IMLVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKD--DSSVLKRIGCCS 217
+ V + G +G+TI+V D++ K+ CCS
Sbjct: 181 KPVASDEVGAGQGGVKEGKTIDVATGADAAAHKK-QCCS 218
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 161/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 176/214 (82%), Gaps = 6/214 (2%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS++A++
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDQ 181
Query: 186 GSNGTASTLPSKGE--TINVKDDSSVLKRIG-CC 216
G + P GE T+ + + + + G CC
Sbjct: 182 GESAQN---PIGGERRTLEITNSADTEAKQGKCC 212
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 174/215 (80%), Gaps = 9/215 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++DNK +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALL YD+T+ TF NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--E 184
K+DLRHL AV T+D KAFA + L F+ETSALDA+NVE AF + LT+IY+IVS +A+ +
Sbjct: 123 KSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDND 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSV---LKRIGCC 216
AGS G P +G +I + + K+ CC
Sbjct: 183 AGSAGA----PGQGTSIPLSSSNPPGGDAKKGQCC 213
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 174/214 (81%), Gaps = 12/214 (5%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++NK +KAQI
Sbjct: 4 DDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL+HL AV TE+ + FAE+ L F+ETSAL+A NV++AFT +LT+IY IVS++ V A
Sbjct: 124 KSDLKHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQVAA- 182
Query: 187 SNGTASTLPSKGETI--NVKDDSSVLKRIGC-CS 217
P K +T+ K +S K GC CS
Sbjct: 183 --------PEKPDTVIDPTKPQNSKEKSGGCGCS 208
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 172/211 (81%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYDYLFK+VLIGDSGVGKSNLLSRFTKN F L+SKSTIGVEFATR++++D K +KAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+NV RWL+ELR+H D NI+VMLIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DLRHL +V+ ED +FAE E L+F+ETSALDATNVE AF VL +IY+I+SK+ + +
Sbjct: 133 IDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPLSSEE 192
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+G+ S +G++I V +S CCS+
Sbjct: 193 SGSGSGNLREGQSIQVSATNSSALTSRCCSS 223
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 172/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYR ITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS++A++ G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIG-CC 216
+ A+ T+ K G CC
Sbjct: 183 DSAQATIGSGTNITLTPPPSDEAAKGGGKCC 213
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 161/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQKQI 181
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/209 (65%), Positives = 170/209 (81%), Gaps = 5/209 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
+DYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ KAFA + +L F+ETSALDA+NVE+AF +LT IY+IVS +++E ++
Sbjct: 127 LKHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADP 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIG--CC 216
P G++I V ++ G CC
Sbjct: 187 IK---PPTGDSITVSPSVDTNQQQGGKCC 212
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 168/210 (80%), Gaps = 2/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKS+LLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H +++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL ++ TE+ KAFAE L F+ETSALD+TNVE AF +LT+IY+IVS+R +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G + E +V+ + R CC
Sbjct: 185 PEG--DVIRPDAEPADVRPSQADSVRRQCC 212
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 134/195 (68%), Positives = 167/195 (85%), Gaps = 2/195 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEFN+ESKSTIGVEFAT+S++ +NK++KAQI
Sbjct: 59 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENKIIKAQI 118
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+H+TF+N RWL+ELR+H + NI+VML+GN
Sbjct: 119 WDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIVVMLVGN 178
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL VS E+ K FAE+ SL F+ETSALD++ V+ AF ++LT+IYK+++K+ +
Sbjct: 179 KCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNKKQMSG- 237
Query: 187 SNGTASTLPSKGETI 201
NG S +GE I
Sbjct: 238 -NGNNSLNIGQGERI 251
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 172/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRG VGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQKSSKLQCCQN 217
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/212 (67%), Positives = 175/212 (82%), Gaps = 4/212 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYDYLFK+VLIGDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+++++ K+VKAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+NV RWL+ELR+H D NI+VMLIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL+HL +VS ED +FAE+E L F+ETSALDATNV+ AF VLT+IY+I+SK+A+ A
Sbjct: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKALAADE 192
Query: 188 NGTASTLPSKGETINVK--DDSSVLKRIGCCS 217
G + +G++I V D SS R CCS
Sbjct: 193 AGAGAGAVREGQSIQVSATDSSSFTSR--CCS 222
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 170/210 (80%), Gaps = 6/210 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV TE+ K F+ + L F+ETSALDA+NVE+AF +LT IY+IVS +++E ++
Sbjct: 127 LKHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADP 186
Query: 190 TASTLPSKGETINVK---DDSSVLKRIGCC 216
P G+T+ V D+S+ + CC
Sbjct: 187 IK---PPTGDTLTVSPSVDNSANAQGGKCC 213
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 173/210 (82%), Gaps = 2/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +K+QI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA +L F+ETSALDA+NVE AF +LT+I++IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+A S + + + + GCC
Sbjct: 183 D--SAQNPLSDRKVVEITKTQDPESKQGCC 210
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 172/217 (79%), Gaps = 9/217 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK-----R 181
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE +F +LT+IY+IVS+ R
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADR 184
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
A S G S T+ D ++ CC N
Sbjct: 185 AAHEDSPGNNVVDISVTPTM----DGQRSVKLQCCQN 217
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 172/217 (79%), Gaps = 9/217 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK-----R 181
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE +F +LT+IY+IVS+ R
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADR 184
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
A S G S T+ D ++ CC N
Sbjct: 185 AAHEDSPGNNVVDISVTPTM----DGQRSIKLQCCQN 217
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 137/212 (64%), Positives = 172/212 (81%), Gaps = 1/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ ++ K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++N RWL+EL++H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV ++ KAFAE+ L F+ETSALD++NVE AF +LT+IY+IVS+R + +G
Sbjct: 125 KSDLRHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQM-SG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + SK I V+ + K+ CC N
Sbjct: 184 RGDDSFSPSSKVVPITVQPTQNSGKQSACCQN 215
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQKGSKLQCCQN 217
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 53 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 112
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 113 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 172
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 173 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 232
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 233 SAHDESPGNNVVDISVPP-------TTDGQKSNKLQCCQN 265
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 137/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQRGSKLQCCQN 217
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 178/214 (83%), Gaps = 3/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ DEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED +++AE+E L F+ETSAL+ATNVE AF +L++IY+IVSK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKSLS 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + AS G+TI V K+ CCS+
Sbjct: 184 SEESAPASI--KDGKTIVVGGPEPDTKKT-CCSS 214
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 133/177 (75%), Positives = 159/177 (89%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ KA+AE+ L F+ETSALD+TNVE AFT +LT+IY+ VS R V
Sbjct: 125 KSDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRSVSTRQV 181
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 173/212 (81%), Gaps = 5/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++DNK +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AVST+D K FA + L F+ETSALDA+NVE AF + L +IY+IVS +A++
Sbjct: 123 KSDLRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALD-- 180
Query: 187 SNGTASTLPSKGETINV-KDDSSVLKRIG-CC 216
G S P +G I + + K+ G CC
Sbjct: 181 -QGEPSQGPGQGSAIPLGPSNMPADKKSGQCC 211
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 162/177 (91%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K++KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+I++IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQI 181
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 177/216 (81%), Gaps = 7/216 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKAQ 65
DE YDYL+K+VLIGDSGVGKSN+LSRFT++EFNLESKSTIGVEFAT+S+ +D KV+KAQ
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELR+H DPNI+++L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVG 124
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DL+HL AVS E+ FA +E L F+ETSALDATNVE AF ++L +IY + K+ +E
Sbjct: 125 NKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIE- 183
Query: 186 GSNGTASTLPSKGETINVKD---DSSVLK-RIGCCS 217
N ++T P +G+ I++ + DS + + R GCCS
Sbjct: 184 -DNPQSTTQPGRGQKIHLDEERTDSQIRQSRRGCCS 218
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 174/214 (81%), Gaps = 3/214 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IV ++ + A
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQKQI-AD 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLK--RIGCCSN 218
+ + + I+V + LK + CC N
Sbjct: 184 RSAHDESPGNNVVDISVPPTTDGLKGSKFQCCQN 217
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 288 bits (737), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 167/201 (83%), Gaps = 8/201 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 184 -----EAGSNGTASTLPSKGE 199
G+N +LP E
Sbjct: 185 SAHDESPGNNVVDISLPPTTE 205
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 175/214 (81%), Gaps = 4/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D+EYDYLFK+VLIGD+GVGKSNLLSRFT+NEF+LESKSTIGVEFATRS++ + K++KA
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F NV RWL+EL++H D NI++ML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL AV+T+D AFAE L F+ETSALD +NVE AF +L++IY++ SK+A+E
Sbjct: 123 GNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALE 182
Query: 185 AGSNGTASTLPSKGET--INVKDDSSVLKRIGCC 216
GS T++ P+ +T IN D ++ CC
Sbjct: 183 KGS--TSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 161/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 169/207 (81%), Gaps = 4/207 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ KAFA + L F+ETSALDA+NVE+AF +LT IY+IVS +++E+ S
Sbjct: 127 LKHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESSSTN 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCC 216
P++G ++ + + K CC
Sbjct: 187 IEP--PTQGISVTAPEPAD--KGGKCC 209
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 161/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 168/207 (81%), Gaps = 2/207 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ K FA + L F+ETSALDA+NVE+AF +LT IY+IVS +++E+ ++
Sbjct: 127 LKHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESSTSN 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCC 216
P + ++ + D+ + CC
Sbjct: 187 IEP--PKESISVGITQDTKQQQGKTCC 211
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 169/210 (80%), Gaps = 2/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKS+LLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H +++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL ++ TE+ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQMRDP 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G + E +V+ + R CC
Sbjct: 185 PEG--DVIRPDAEPADVRAAGADAVRRNCC 212
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 130/177 (73%), Positives = 160/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT S+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 174/214 (81%), Gaps = 3/214 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLF++VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQM-VD 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLK--RIGCCSN 218
G + + I+V + LK + CC N
Sbjct: 184 RPGHDESPGNNVVDISVPPTTDGLKGNKFQCCQN 217
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 168/212 (79%), Gaps = 2/212 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
YK D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
+ GNK+DL HL AVS +D + AE+E L F+ETSAL+A NVE AF +L IY I+SK+A
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIG 214
+ A + LP G TINV D S + + G
Sbjct: 182 L-AAQEAASINLP-HGTTINVGDLSGTVVKSG 211
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 171/211 (81%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS++IDNK +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ +F+NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV-EA 185
KTD RHL AV TEDGK FA + L F+ETSAL+ATNV+ AF +LT IY+IVS +++ E
Sbjct: 123 KTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAEE 182
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G++ P +G I + + + CC
Sbjct: 183 GADVGKKFDPREGNNITLSQEGRKEESKTCC 213
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/207 (66%), Positives = 172/207 (83%), Gaps = 3/207 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+ +D+K VKAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+++HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV TE+ K F+ + L F+ETSALDA+NVE+AF +LT +Y+IVS +++E S+
Sbjct: 127 LKHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSLEQSSDP 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCC 216
+ P+ +TI V DSS + G C
Sbjct: 187 IRA--PT-SDTIPVAIDSSAPTKNGSC 210
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 170/213 (79%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D I++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS+ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/211 (65%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VLIGDSGVGKSNLL+RFT+NEFNLESKSTIGVEFATRS++++ K++KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+QNV RWL ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV ++ AFAE +L F+ETSALD+TNVE AF +LT+IY IVS++ +
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQMRDP 184
Query: 187 SNGTASTLPSKGETINVKDD-SSVLKRIGCC 216
G + P+ E I+VK +S R CC
Sbjct: 185 PEGD-TIRPTNIEPIDVKPTVNSDNVRKQCC 214
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 135/198 (68%), Positives = 165/198 (83%), Gaps = 2/198 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 1 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 60
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 61 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 120
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL +V T++ + FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 121 KSDLRHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDP 180
Query: 187 SNGTASTLPSKGETINVK 204
G + E I+VK
Sbjct: 181 PEG--DVIRPNVEPIDVK 196
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 168/209 (80%), Gaps = 5/209 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
+DYLFK+VLIGDSGVGKSNLLSRFT+NEFNLE+KSTIGVEFATRS+ +D K +KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAIT+AYYRGAVGALLVYD+++HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV TE+ KAFA + L F+ETSALDA+NVE+AF +LT IY+IVS +++E +
Sbjct: 127 LKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSDDP 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIG--CC 216
P+ G+TI V G CC
Sbjct: 187 IK---PTSGDTITVSHSVDTPANAGGKCC 212
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 176/216 (81%), Gaps = 1/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+I+ K V
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF NV RWLRELR+H D NI+VM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +V ED +AF+E+E L F+ETSAL+A NVE AF VL++I++IVSK+A
Sbjct: 122 MVGNKSDLNHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A + A+ +G TINV + S+ K CCS+
Sbjct: 182 LAAQESAAANGRSMQGTTINVAEPSTNAKG-SCCSS 216
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/209 (66%), Positives = 169/209 (80%), Gaps = 3/209 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATR++++D K VKAQIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDT 68
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ + +TF NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSD 128
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T+ ++FAE+ +L FMETSALDA+NVE AF +LT IY+IVS +A++ N
Sbjct: 129 LKHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKALD--QNQ 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCCSN 218
P ETI V S K GCC++
Sbjct: 187 GPGLTPGPRETITVS-KSEEKKNGGCCAS 214
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/179 (73%), Positives = 160/179 (89%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
L+HL AV T++ K+FA + +L F+ETSALDA+NVE+AF +LT IY+IVS +++E+ +N
Sbjct: 127 LKHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSAN 185
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/220 (61%), Positives = 172/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+ NVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQKGSKLQCCQN 217
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/217 (64%), Positives = 170/217 (78%), Gaps = 14/217 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++M +GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL AV TE+ KA++E+ L F+ETSALD+TNVE AF +LT+IY IVS+
Sbjct: 125 KCDLRHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQ------ 178
Query: 187 SNGTASTLPSK---GETINVK----DDSSVLKRIGCC 216
+ TA+ +PS GE +K D + CC
Sbjct: 179 -SSTANDVPSAPELGERTTIKPTEGDQQQASGKRQCC 214
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 169/212 (79%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++ K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAF+E+ L F+ETSALD+TNVE AF +LT+IY IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQINDS 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+N + + + K+ CC N
Sbjct: 185 NNDEEVKDGQPVDIVISSTNPQPNKQSQCCKN 216
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 172/212 (81%), Gaps = 1/212 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS++ID K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +F+NV RWL+ELR+H D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV-E 184
NKTD RHL AV TEDGK FA + L F+ETSAL+ATNV+ AF +LT IY+IVS +++ E
Sbjct: 122 NKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAE 181
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G++ P +G I++ + + + CC
Sbjct: 182 EGADVGKKFDPREGNNISLSQEGAKKEDKSCC 213
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 169/212 (79%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+++DNK VKAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ ++ T++N WL+EL++H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ K+FAE+ L F+E SALD+TNVE AF +LT+IY+IVS+R + G
Sbjct: 125 KSDLRHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAGG 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + + E I V + CC N
Sbjct: 185 QPESEFSHGTTIEPIKVLPTQQGARETPCCQN 216
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 173/211 (81%), Gaps = 4/211 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKDDSSV-LKRIGCC 216
A+ P+ G I++ + K CC
Sbjct: 183 D---AAQAPTGGVKIDMAPSGTPDAKGNKCC 210
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/229 (60%), Positives = 174/229 (75%), Gaps = 20/229 (8%)
Query: 7 DEEYDYLFK-------------------LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIG 47
++EYD+LFK +VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIG
Sbjct: 3 NDEYDFLFKGNVATFPAQSPQLFIPFRYVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIG 62
Query: 48 VEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRW 107
VEFATRS+++D+K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RW
Sbjct: 63 VEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRW 122
Query: 108 LRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAF 167
L+ELR+H D NI++ML+GNK+DLRHL AV T++ K FA + +L F+ETSALDA+NVE AF
Sbjct: 123 LKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAF 182
Query: 168 TEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+LT+IY+IVS +A+ G + +TL S G TI V + GCC
Sbjct: 183 QNILTEIYRIVSSKAIIEGGDSGQATL-SSGRTIEVSKTPDTESKQGCC 230
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/209 (66%), Positives = 167/209 (79%), Gaps = 2/209 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++ K VKAQIWDT
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 92
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H T++ V RWL+ELR+H D NI++ML+GNK+D
Sbjct: 93 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSD 152
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
LRHL AV T++ KA+AE+ L F+ETSALD+TNVE AFT +LT+IYK VS +
Sbjct: 153 LRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHFGGDDRV 212
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCCSN 218
S + + G I+ D K+ CCSN
Sbjct: 213 QVSPVGTNGIVISPTTDPQTKKQ--CCSN 239
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 170/209 (81%), Gaps = 5/209 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
+DYLFK+VLIGDSGVGKSNLLSRFT+NEFNLE+KSTIGVEFATR++ +D K +KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAIT+AYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV TE+ KAF+ + L F+ETSALDA+NVE+AF +LT I++IVS +++E +
Sbjct: 127 LKHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLEPSGDA 186
Query: 190 TASTLPSKGETINVKD--DSSVLKRIGCC 216
PS G+T+ V D+S + CC
Sbjct: 187 IK---PSSGDTLTVSPSVDTSNAQASKCC 212
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 169/210 (80%), Gaps = 6/210 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQIWDT
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAIT+AYYRGAVGALLVYD+T+H ++ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ KAF+ + L F+ETSALDATNVE+AF LT IY+IVS++ +E ++
Sbjct: 127 LKHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTLEQNADP 186
Query: 190 TASTLPSKGE--TINVKDDSSVLKRIG-CC 216
P G+ TIN D+S G CC
Sbjct: 187 IK---PPTGDTRTINPSVDNSASAPSGKCC 213
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/209 (65%), Positives = 168/209 (80%), Gaps = 5/209 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
+D+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRSL ID K VKAQIWDT
Sbjct: 7 FDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ KAF+ + L F+ETSALDA+NVE+AF +LT IY+IVS +++E ++
Sbjct: 127 LKHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSADP 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIG--CC 216
PS G+ I V + G CC
Sbjct: 187 IK---PSTGDNILVTPSVDPQAQSGSKCC 212
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ T+ NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TED K FA + L F+ETSALD+TNVE AF +LT+IY+IVS +A++ G
Sbjct: 123 KSDLRHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKALDGG 182
Query: 187 SNGTASTLPSKGETINVKDDS-SVLKRIGCC 216
S P + +++ + + K CC
Sbjct: 183 DQHQVSQ-PGSSQPLHITPTAENSTKDTKCC 212
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 129/177 (72%), Positives = 160/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ + FAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/194 (69%), Positives = 164/194 (84%), Gaps = 4/194 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ ++ K VKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ K +AE+ L F+ETSALD+TNVE AFT +LT+IYK VS + V
Sbjct: 124 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTD 183
Query: 184 -EAGSNGTASTLPS 196
+ G+ + +PS
Sbjct: 184 RQGYGGGSGTIIPS 197
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/194 (69%), Positives = 164/194 (84%), Gaps = 4/194 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ ++ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ K +AE+ L F+ETSALD+TNVE AFT +LT+IYK VS + V
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTD 184
Query: 184 -EAGSNGTASTLPS 196
+ G+ + +PS
Sbjct: 185 RQGYGGGSGTIIPS 198
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 172/211 (81%), Gaps = 7/211 (3%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YD+LFK+VLIGDSGVGKSNLLSRFT+NEFN+ESKSTIGVEFATRS+ +D+K +KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+++ ++ +V RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
LRHL AV TE+ KAFA + +L F+ETSA+DA+NVE+AF +LT IY+IVS +A+E+ +
Sbjct: 127 LRHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKALESSGD- 185
Query: 190 TASTLPSKGETINV---KDDSSVLKRIG-CC 216
S P+ G TI V DD + G CC
Sbjct: 186 --SVGPTSGSTITVTPTADDGAKSNAGGKCC 214
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 130/191 (68%), Positives = 167/191 (87%), Gaps = 2/191 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFN++SKSTIGVEFATRS+++D+K +KAQIW
Sbjct: 4 DEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GNK
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVGNK 123
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
+DLRHL AV+T++ KAFA + L F+ETSALDA+NVE AF +LT+IY+IVS + +
Sbjct: 124 SDLRHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLPENE 183
Query: 188 NGTASTLPSKG 198
+G ++P +G
Sbjct: 184 HG--GSIPDRG 192
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 133/190 (70%), Positives = 161/190 (84%), Gaps = 4/190 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATR++ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN- 188
L+HL AV TE+ K FA + L F+ETSALDA+NVE+AF +LT IY+IVS + +E S+
Sbjct: 127 LKHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTLEQSSDP 186
Query: 189 ---GTASTLP 195
T+ T+P
Sbjct: 187 IKAPTSDTIP 196
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 167/206 (81%), Gaps = 10/206 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ ++ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA- 185
K+DLRHL AV T++ K +AE+ L F+ETSALD+TNVE AFT +LT+IYK VS + V +
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGSD 184
Query: 186 -----GSNGT----ASTLPSKGETIN 202
G +GT T P K + N
Sbjct: 185 RQGYGGGSGTIIPAPPTEPPKKQCCN 210
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 175/213 (82%), Gaps = 2/213 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L ++ K++KAQI
Sbjct: 16 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 75
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGA+GA+LVYDV++ TF+N+ RWL+ELR+H D NI +ML+GN
Sbjct: 76 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGN 135
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--E 184
KTDL+HL AV+T+DG++FAE E L ++ETSAL+ATNVE AF +L IY+ +SK+AV +
Sbjct: 136 KTDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVALD 195
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
G G A +G+TINV + ++ CCS
Sbjct: 196 DGGAGGAGGGVKEGKTINVAASDTSGEKKQCCS 228
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 166/206 (80%), Gaps = 10/206 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ ++ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE-- 184
K+DLRHL AV T++ K +AE+ L F+ETSALD+TNVE AFT +LT+IYK VS + V
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTD 184
Query: 185 ----AGSNGT----ASTLPSKGETIN 202
G +GT T P K + N
Sbjct: 185 RQGYGGGSGTIIPAPPTEPPKKQCCN 210
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 179/219 (81%), Gaps = 7/219 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG ++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S++ + K
Sbjct: 1 MAG--KEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGK 58
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TF+NV RWL+ELR+H + NI+
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIV 118
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHL V+ E+ FA++ +L F+ETSALDA+ V++AF +LT+IY+++S+
Sbjct: 119 VMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSR 178
Query: 181 RAVEAGSNGTASTLPSKGETI---NVKDDSSVLKRIGCC 216
+ + A + T L S+GETI + +DD+S + C
Sbjct: 179 KTI-AANTATGPDL-SRGETIALSSARDDASNRSKSSCA 215
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 171/206 (83%), Gaps = 4/206 (1%)
Query: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQE 73
F+LVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHL 133
RYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 134 VAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTAST 193
AV T++ KAFAE+ +L F+ETSALD+TNVE AF +LT+IYKIVS++ + + S
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSPDDDNS- 183
Query: 194 LPSKG-ETINVKD-DSSVLKRIGCCS 217
PS +TI+V D++ ++ CCS
Sbjct: 184 -PSNNVQTIHVAPTDNAAPRQQKCCS 208
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 157/177 (88%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ ++ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ K +AE+ L F+ETSALD+TNVE AFT +LT+IYK VS + V
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHV 181
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 171/221 (77%), Gaps = 23/221 (10%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++DNK +KAQI
Sbjct: 3 NDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD++++ T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T+D K FA + L F+ETSALDATNVE AF +LT+IY IVS ++
Sbjct: 123 KSDLRHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFAEE 182
Query: 184 --------EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
E G+N T S KGE+ GCC
Sbjct: 183 DGKKFDPREGGTNITLSQEGPKGES------------KGCC 211
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/228 (60%), Positives = 173/228 (75%), Gaps = 23/228 (10%)
Query: 7 DEEYDYLFK--------LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRID 58
D+EYDYLFK +VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D
Sbjct: 5 DDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 64
Query: 59 NKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPN 118
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D N
Sbjct: 65 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN 124
Query: 119 IIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV 178
I++ML+GNK+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IV
Sbjct: 125 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIV 184
Query: 179 SKRAV--------EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
S++ + G+N ++P D ++ CC N
Sbjct: 185 SQKQIADRAAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 225
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++ K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++N RWL+EL++H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD++NVE AF +LT IY IVS+R + +G
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQM-SG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + S I+V+ + + CC N
Sbjct: 184 RTDSDFSPASNVVPISVEPTQTSSSKGSCCQN 215
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/199 (67%), Positives = 163/199 (81%), Gaps = 3/199 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H+T+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ KAF+ L F+ETSALD NVE AF +LT IY+IVS +A+EA +
Sbjct: 127 LKHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKALEAAPDV 186
Query: 190 TASTLPSKGETINVKDDSS 208
PS GE+I + S+
Sbjct: 187 IK---PSGGESITIAPSSN 202
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 169/209 (80%), Gaps = 5/209 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
+DYLFK+VLIGDSGVGKSNLLSRFT+NEFN+E+KSTIGVEFATRS+ ++ K +KAQIWDT
Sbjct: 7 FDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAIT+AYYRGAVGALLVYD+++HAT+ NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV TE+ KAFA + L F+ETSALDA+NVE+AF +LT IY+IVS +++E +
Sbjct: 127 LKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSEDP 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIG--CC 216
P+ G+TI V + G CC
Sbjct: 187 IK---PTSGDTIQVSHSVDQNQSQGGKCC 212
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/204 (65%), Positives = 166/204 (81%), Gaps = 2/204 (0%)
Query: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 72
+ +VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRH 132
ERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GNK+DLRH
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 122
Query: 133 LVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTAS 192
L AV T++ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A++ G +G A
Sbjct: 123 LRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGDSGQAP 182
Query: 193 TLPSKGETINVKDDSSVLKRIGCC 216
S G TI V + GCC
Sbjct: 183 L--SSGRTIEVSKAPDTESKQGCC 204
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/214 (62%), Positives = 173/214 (80%), Gaps = 4/214 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D+EYDYLFK+VLIGD+GVGKSNLLSRFT+NEF+LESKSTIG EFATRS++ + K++KA
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F NV RWL+EL++H D NI++ML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL AV+T+D AFAE L F+ETSALD + VE AF +L++IY++ SK+A+E
Sbjct: 123 GNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKALE 182
Query: 185 AGSNGTASTLPSKGET--INVKDDSSVLKRIGCC 216
GS T++ P+ +T IN D ++ CC
Sbjct: 183 KGS--TSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 167/212 (78%), Gaps = 1/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ ++ K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++N RWL+EL++H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV ++ KA AE+ L F+ETSALD++NVE AF +LT IY IVS+R + G
Sbjct: 125 KSDLRHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQM-TG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ T + S I V+ + K CC N
Sbjct: 184 RSDTDFSPNSNVVPITVQPTQNAAKSSACCQN 215
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 134/207 (64%), Positives = 171/207 (82%), Gaps = 3/207 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YD+LFK+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATRS+ +D K VKAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HAT+ +V RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV TE+ KAF+ + L F+ETSALDA+NV++AF +LT IY+IVS +++E ++
Sbjct: 127 LKHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSLEQSADP 186
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCC 216
+ P+ +TI V DSS + CC
Sbjct: 187 IRA--PT-SDTIPVAIDSSAPSQSKCC 210
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/195 (68%), Positives = 167/195 (85%), Gaps = 2/195 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ ++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++ K VKA
Sbjct: 3 RTEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+++V RWL+ELR+H D +I++ML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DLRHL AV T++ KAFAE+ +L F+ETSALD+TNVE+AF ++LT IY IVS++ +
Sbjct: 123 GNKNDLRHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRK--Q 180
Query: 185 AGSNGTASTLPSKGE 199
++G A K E
Sbjct: 181 MANDGDADIAALKNE 195
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 173/212 (81%), Gaps = 6/212 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYDYLFK+VLIGDSGVGKSNLLSRFTKN F+L+SKSTIGVEFATR+ +++ K +KAQIW
Sbjct: 14 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIW 73
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ ATF+NV RWL+ELR+H D NI++MLIGNK
Sbjct: 74 DTAGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNK 133
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
TDLRHL +V+T+ FAE E L F+ETSALDATNV+ AF VL +I++++SK+A+
Sbjct: 134 TDLRHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALTTED 193
Query: 188 NGTASTLPSKGETINVK--DDSSVLKRIGCCS 217
+G + +G++I V + +SV R CCS
Sbjct: 194 SGAG--VVGEGQSILVSGGEPTSVSSR--CCS 221
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 176/220 (80%), Gaps = 8/220 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA K D+ YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+S+ + K
Sbjct: 1 MASPKEDD-YDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGK 59
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H +F+NV RWL+ELREH D N +
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTV 119
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL AV TE+ AFAE+ +L F+ETSAL+A V++AF +LT+IYK++S+
Sbjct: 120 IMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSR 179
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSS----VLKRIGCC 216
+ ++A N ++PS G+ I + D + K+ CC
Sbjct: 180 KTMQAEENQI--SIPS-GDNIVITSDKTEEGVKKKKSSCC 216
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/210 (64%), Positives = 168/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++ K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++N RWL+EL++H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ KAFAE+ L F+ETSALD++NVE AF +LT IY IVS+R +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
S+ S S I V+ + + CC
Sbjct: 185 SDSDFSP-ASNVVPITVEPTQNSSNKGACC 213
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/196 (68%), Positives = 165/196 (84%), Gaps = 2/196 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYDYLFK+VLIGDSGVGKSNLLSRFTKN F+L+SKSTIGVEFATR++ ++ K +KAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ ATF NV RWL+ELR+H D NI++MLIGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLIGNK 132
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL+HL +V+ ED +FAE+E L F+ETSALDATNV+ AF VL +IY+I+SK+A+
Sbjct: 133 MDLKHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALSTDD 192
Query: 188 NGTASTLPSKGETINV 203
+G + +G++I V
Sbjct: 193 SGAGAV--KEGQSIQV 206
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 170/210 (80%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD +VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQI
Sbjct: 3 NDEYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 63 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K+FA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G
Sbjct: 123 KSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSG 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ A+ +++ D K CC
Sbjct: 183 DSAQATIGAGTNISLSKPADDDAAKGGKCC 212
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/219 (61%), Positives = 174/219 (79%), Gaps = 16/219 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKS++LSRFT+NEFN++SKSTIGVEFATRSL +D K +KAQIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDT 67
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+++ ++F NV RWL+EL++H D NI++ML+GNK+D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSD 127
Query: 130 LRHLVAVSTEDGKAFAEQES-----------LYFMETSALDATNVENAFTEVLTQIYKIV 178
L+HL AV T + +++ E++S + F+ETSALD+TNVE AF +LT IY++V
Sbjct: 128 LKHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLV 187
Query: 179 SKRAVEAGSNGTASTLPSKGETINVKDDS-SVLKRIGCC 216
+ +A+E G S P+ GETINV+ S S K+ GCC
Sbjct: 188 ATKALEGGD----SIKPTNGETINVQPTSDSDNKKAGCC 222
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 174/216 (80%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D EY YLFK+VLIGDSGVGKSN+LSRFT+N F+L+SKSTIGVEFAT+SL++D K +
Sbjct: 2 GGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F NV RWLRELR+H D +I++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR- 181
++GNK+DL HL A+S ++GKA AE+E L+F+ETSA++A NVE AF ++T++Y IV+++
Sbjct: 122 MVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNRKA 181
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ ++LPS+G+ I++ + KR CCS
Sbjct: 182 LAAKEAAAATASLPSQGKIISIDSTAGNTKR-ACCS 216
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 176/220 (80%), Gaps = 8/220 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA K D+ YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+S+ + K
Sbjct: 165 MASPKEDD-YDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGK 223
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H +F+NV RWL+ELREH D N +
Sbjct: 224 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTV 283
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL AV TE+ AFAE+ +L F+ETSAL+A V++AF +LT+IYK++S+
Sbjct: 284 IMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSR 343
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSS----VLKRIGCC 216
+ ++A N ++PS G+ I + D + K+ CC
Sbjct: 344 KTMQAEENQI--SIPS-GDNIVITSDKTEEGVKKKKSSCC 380
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 128/174 (73%), Positives = 157/174 (90%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDT
Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYR ITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
LRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 122 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 175
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 172/212 (81%), Gaps = 4/212 (1%)
Query: 7 DEEYD--YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
++EYD Y+ +VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +K+
Sbjct: 3 NDEYDVSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKS 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYDV++H T++NV RWL+ELR+H D NI++ML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DLRHL AV T++ K FA + +L F+ETSALDA+NVE AF +LT+I++IVS +A+E
Sbjct: 123 GNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALE 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+G + K I DS K+ GCC
Sbjct: 183 SGDSSANQLGDRKVVEITKTPDSE--KKPGCC 212
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 165/211 (78%), Gaps = 2/211 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N RWL+ELREH D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK D +H+ A+ T+ G FAE L F+ETSALDATNVE AF +LT+IY+IVS +A+E
Sbjct: 122 NKIDQKHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALEN 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G++G K I D+ ++ CC
Sbjct: 182 GTSGQNPLGDRKVVEITKSQDADAKQK--CC 210
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 171/210 (81%), Gaps = 4/210 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD + VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQI
Sbjct: 3 NDEYDVM---VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQI 59
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 60 WDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGN 119
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A++ G
Sbjct: 120 KSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQG 179
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G+ L + + + + + ++ GCC
Sbjct: 180 E-GSGPVLGNDRKVLEISKSADAEQKKGCC 208
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 165/211 (78%), Gaps = 2/211 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N RWL+ELREH D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK D +H+ A+ T+ G FAE L F+ETSALDATNVE AF +LT+IY+IVS +A+E
Sbjct: 122 NKIDQKHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKALEN 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G++G K I D+ ++ CC
Sbjct: 182 GNSGQNPLGDRKVVEITKSQDADAKQK--CC 210
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 177/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D EY YLFK+VLIGDSGVGKSN+LSRFT+N F+L+SKSTIGVEFAT+SL+++ K +
Sbjct: 2 GGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F NV RWLRELR+H D +I++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL AVS ++GKA AE+E L+F+ETSA++A NVE AF ++T++Y IV+++A
Sbjct: 122 MVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKA 181
Query: 183 VEAGSNGTAST-LPSKGETINVKDDSSVLKRIGCCS 217
+ A AS LPS+G+TI++ + KR CCS
Sbjct: 182 LAAKEAAAASAPLPSQGKTISIDSAAGNTKR-ACCS 216
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 139/219 (63%), Positives = 173/219 (78%), Gaps = 2/219 (0%)
Query: 1 MAG-YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MAG + +EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L ++
Sbjct: 1 MAGTRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEG 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K++KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TF N+ RWL+ELR+H D NI
Sbjct: 61 KIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANI 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ML+GNKTDL+HL AV+T+D FAE E L ++ETSAL+ATNVE AF +L IY+ +S
Sbjct: 121 RIMLVGNKTDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAIS 180
Query: 180 KRAVEAGSNGTASTLPSK-GETINVKDDSSVLKRIGCCS 217
K+ V + G + K G+TINV + ++ CCS
Sbjct: 181 KKPVASDEGGAGAAGGVKEGKTINVAAGDANSEKKQCCS 219
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 176/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D EY YLFK+VLIGDSGVGKSN+LSRFT+N F+L+SKSTIGVEFAT+SL+ID K +
Sbjct: 2 GGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAV ALLVYD+T+ +F NV RWLRELR+H D +I++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL A+S ++GKA AE+E L+F+ETSA++A NVE AF ++T++Y IV+++A
Sbjct: 122 MVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRKA 181
Query: 183 VEAGSNGTAST-LPSKGETINVKDDSSVLKRIGCCS 217
+ A + LPS+G+TI++ ++ K+ CCS
Sbjct: 182 LAAKEAAATAAPLPSQGKTISIDSNAGNTKK-ACCS 216
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 168/216 (77%), Gaps = 5/216 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VLIGDSGVGKSNLL+RFT+NEFNLESKSTIGVEFATRS++++ K++KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+QNV RWL ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV ++ AFAE +L F+ETSALD+TNVE AF +LT+I++ VS R +++
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQMDSM 184
Query: 187 SNGTASTLPSK-----GETINVKDDSSVLKRIGCCS 217
+ K T N D ++ + CC+
Sbjct: 185 DGDEIDKVCMKPIRIDATTANTNDSAAFQIKQFCCN 220
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/194 (69%), Positives = 161/194 (82%), Gaps = 3/194 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEFN +SKSTIGVEFATRSL +D KVVKAQIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+++ TF NV RWL+ELR+H D +I+VML+GNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ K FA L F+ETSALDA+NVE AF ++LT IY+IVS ++++A
Sbjct: 127 LKHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSLDAADE- 185
Query: 190 TASTLPSKGETINV 203
PS+G T+ V
Sbjct: 186 --VIQPSRGTTVTV 197
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 177/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D EY YLFK+VLIGD+GVGKSN+LSRFT+N F+L+SKSTIGVEFAT+SL+++ K +
Sbjct: 2 GGRVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F NV RWLRELR+H D +I++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL AVS ++GKA AE+E L+F+ETSA++A NVE AF ++T++Y IV+++A
Sbjct: 122 MVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKA 181
Query: 183 VEAGSNGTAS-TLPSKGETINVKDDSSVLKRIGCCS 217
+ A AS LPS+G+TI++ + KR CCS
Sbjct: 182 LAAKEAAAASRPLPSQGKTISIDSAAGNTKR-ACCS 216
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 175/238 (73%), Gaps = 23/238 (9%)
Query: 1 MAGYKPDEEYDYLFK-------------------LVLIGDSGVGKSNLLSRFTKNEFNLE 41
M G + D+EYDYLFK +VLIGDSGVGKSNLLSRFT+NEFNLE
Sbjct: 1 MGGSR-DDEYDYLFKELQGCWVAIPIIPSLQIIKMVLIGDSGVGKSNLLSRFTRNEFNLE 59
Query: 42 SKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF 101
SKSTIGVEFATRS+++D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+
Sbjct: 60 SKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTY 119
Query: 102 QNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDAT 161
+NV RWL+ELR+H D NI++ML+GNK+DLRHL AV T++ +AFAE+ L F+ETSALD+T
Sbjct: 120 ENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDST 179
Query: 162 NVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
NVE AF +LT+IY+IVS++ + S PS I+V + ++ CC N
Sbjct: 180 NVEAAFQTILTEIYRIVSQKQMSDRRENDMS--PSNNVVPIHVPPTTENKPKMQCCQN 235
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 132/198 (66%), Positives = 165/198 (83%), Gaps = 3/198 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKAQ 65
DE YDYL+K+VLIGDSGVGKSN+LSRFT++EFNLESKSTIGVEFAT+S+ +D KV+KAQ
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELR+H DPNI+++L+G
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVG 124
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DL+HL AVS E+ FA +E L F+ETSALDATNVE AF ++L +IY + K+ +E
Sbjct: 125 NKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIED 184
Query: 186 GSNGTASTLPSKGETINV 203
TA P +G+ I+V
Sbjct: 185 NPQSTAQ--PGRGQKIHV 200
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 169/211 (80%), Gaps = 9/211 (4%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAG 71
+ FK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAG
Sbjct: 140 HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 199
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
QERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLR
Sbjct: 200 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 259
Query: 132 HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV----EAGS 187
HL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + E
Sbjct: 260 HLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDM 319
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + + +P I+V + ++ CC N
Sbjct: 320 SPSNNVVP-----IHVPPTTENKPKVQCCQN 345
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 176/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D EY YLFK+VLIGDSGVGKSN+LSRFT+N F+L+SKSTIGVEFAT+SL++D K +
Sbjct: 2 GGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWLRELR+H D +I++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK-R 181
++GNK+DL HL A+S ++GKA AE+E L+F+ETSA++A NVE AF ++T++Y IV++
Sbjct: 122 MVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNRKA 181
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ T +TLPS+G+TI++ + KR CCS
Sbjct: 182 LAAKEAAATTATLPSQGKTISIDSTAGNTKR-ACCS 216
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 166/201 (82%), Gaps = 1/201 (0%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNL++KSTIGVEFATRS+++D+K +KAQIWDTAGQERY
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 141
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G +G A L
Sbjct: 142 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQAG-LG 200
Query: 196 SKGETINVKDDSSVLKRIGCC 216
+ +++ + GCC
Sbjct: 201 DRRPVVDINPSQDPETKQGCC 221
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 169/211 (80%), Gaps = 3/211 (1%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD + VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 2 ANDEYDVV---VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 58
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 59 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 118
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL AV T++ KAFA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++
Sbjct: 119 NKSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 178
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G A+ +++ D K CC
Sbjct: 179 GDGAQATIGAGTNISLSKAADDEASKSGKCC 209
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 171/215 (79%), Gaps = 4/215 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D + DY+FK+VLIGDS VGKS LLSRF ++EF LESKSTIGVEF TR++ +D K +KAQI
Sbjct: 5 DVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TR TF++V RWL ELR H D N+++M++GN
Sbjct: 65 WDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL + A+S E+G+ F+E+E LYFMETSALD+TNVE AFT VLT+IYKIVSK+++ A
Sbjct: 125 KSDLSNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAAD 184
Query: 187 --SNGTASTLP--SKGETINVKDDSSVLKRIGCCS 217
+ G A+ +P G I + D+ + +K+ CCS
Sbjct: 185 DPNGGLANVMPPVPSGNKILLDDELTAVKKRACCS 219
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/172 (74%), Positives = 153/172 (88%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
P YDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQ
Sbjct: 13 PRGSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 72
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 73 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 132
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKI 177
NK+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+I
Sbjct: 133 NKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 133/208 (63%), Positives = 170/208 (81%), Gaps = 4/208 (1%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DYLFK+VLIGD+GVGKSNLLSRFT+NEF+LESKSTIGVEFATRS++ + K++KAQIWDTA
Sbjct: 10 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRAITSAYYRGAVGALLVYD+T+ +F NV RWL+EL++H D NI++ML+GNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
+HL AV+T+D AFAE L F+ETSALD +NVE AF +L++IY++ SK+A+E GS T
Sbjct: 130 QHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGS--T 187
Query: 191 ASTLPSKGET--INVKDDSSVLKRIGCC 216
++ P+ +T IN D ++ CC
Sbjct: 188 SNFAPNATQTIVINPPADEGKTEKAKCC 215
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/227 (59%), Positives = 173/227 (76%), Gaps = 19/227 (8%)
Query: 7 DEEYDYLFK-----------------LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVE 49
++EYD+LFK LVLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVE
Sbjct: 3 NDEYDFLFKGTSYTPRPAMSNPILRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVE 62
Query: 50 FATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLR 109
FATRS+++D+K +K+QIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+
Sbjct: 63 FATRSIQVDSKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLK 122
Query: 110 ELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTE 169
ELR+H D NI++ML+GNK+DLRHL AV TE+ K FA +L F+ETSALDA+NVE AF
Sbjct: 123 ELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQN 182
Query: 170 VLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+LT+I++IVS +A+++G +A S + + + + GCC
Sbjct: 183 ILTEIFRIVSSKALDSGD--SAQNPLSDRKVVEITKTQDPESKQGCC 227
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/169 (75%), Positives = 153/169 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 83 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L ++ K++KAQIWDT
Sbjct: 16 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDT 75
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGA+GA+LVYDVT+ TF+N+ RWL+ELR+H D NI +ML+GNKTD
Sbjct: 76 AGQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTD 135
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV+T+D ++AE E L ++ETSAL+A NVE AF +L IY+ +SK+AV + +
Sbjct: 136 LKHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVASEEDR 195
Query: 190 TASTLPSKGETINVKDDSS-VLKRIGCCS 217
A+ +G+TINV +S ++ CCS
Sbjct: 196 AAAAGVKEGKTINVAATASDGGEKKQCCS 224
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 168/210 (80%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++++ K VKAQI
Sbjct: 4 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++N RWL+EL++H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV ++ +AFAE+ L F+ETSALD++NVE AF +LT IY IVS+R +
Sbjct: 124 KSDLRHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQMSGR 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
S+ S S I V+ ++ + CC
Sbjct: 184 SDSDFSP-ASNVVPITVEPTQTLSNKGVCC 212
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 132/183 (72%), Positives = 158/183 (86%), Gaps = 5/183 (2%)
Query: 38 FNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
+LESKSTIGVEFATRS+ +D+KVVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR
Sbjct: 1 MSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTR 60
Query: 98 HATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 157
H TF+NV RW+REL++HTD NI++ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSA
Sbjct: 61 HVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSA 120
Query: 158 LDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGC 215
L++ NVENAFTEVLTQIY +VSK+A++ G + A P KG+TINV KDD S +K+ C
Sbjct: 121 LESMNVENAFTEVLTQIYHVVSKKALDIGDDPAA---PPKGQTINVGGKDDVSAVKKSAC 177
Query: 216 CSN 218
CS+
Sbjct: 178 CSS 180
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 167/210 (79%), Gaps = 1/210 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATRS++ D+K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ T++NV RWL ELR+H D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV TE A AE+ L F+ETSALD+TNVE AF ++LT+I+ IV+ +
Sbjct: 124 KSDLRHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNG-GKQLE 182
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ + ++ + E + V D + K CC
Sbjct: 183 TKKDSQSVDGETEVVQVGGDPAPKKAGACC 212
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 173/213 (81%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ +EEYDYLFK+VLIGDSGVGKSNL SRFT+NEF LESKSTIGVEFATR+L ++ ++VKA
Sbjct: 4 RGEEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +F+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL V+TED +++AE+E L F+ETSAL+ATNV+ AF +L QIY+I+SK+++
Sbjct: 124 GNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKSLS 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ S ++ +G TI ++ CC+
Sbjct: 184 SSSTDPSAPNIKQGNTITIEGGLQPNTSKSCCT 216
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 132/216 (61%), Positives = 175/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D EY YLFK+VLIGDSGVGKSN+LSRFT+N F+L+SKSTIGVEFAT+SL+ID K +
Sbjct: 2 GGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAV ALLVYD+T+ +F NV RWLRELR+H D +I++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL A+S ++GKA AE+E L+F+ET A++A NVE AF ++T++Y IV+++A
Sbjct: 122 MVGNKSDLIHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNRKA 181
Query: 183 VEAGSNGTAST-LPSKGETINVKDDSSVLKRIGCCS 217
+ A + LPS+G+TI++ ++ K+ CCS
Sbjct: 182 LAAKEAAATAAPLPSQGKTISIDSNAGNTKK-ACCS 216
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/201 (66%), Positives = 160/201 (79%), Gaps = 1/201 (0%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQIWDTAGQERY
Sbjct: 88 FVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERY 147
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GNK+DLRHL +
Sbjct: 148 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRS 207
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + G P
Sbjct: 208 VPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEGDV-IRP 266
Query: 196 SKGETINVKDDSSVLKRIGCC 216
S E I+VK + R CC
Sbjct: 267 SNVEPIDVKPTVTADVRKQCC 287
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 50/51 (98%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI 57
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV 55
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 130/201 (64%), Positives = 163/201 (81%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQIWDTAGQERY
Sbjct: 4 FVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 63
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 64 RAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRA 123
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V TE+ KAFA + L F+ETSALDA+NVE AF +LT+IY+IVS +A++ G + A+
Sbjct: 124 VPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDSAQATIGA 183
Query: 196 SKGETINVKDDSSVLKRIGCC 216
+++ D K CC
Sbjct: 184 GTNISLSKPADDDASKGGKCC 204
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 163/208 (78%), Gaps = 2/208 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y + VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDT
Sbjct: 12 YTRMNPFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 71
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GNK+D
Sbjct: 72 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 131
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
LRHL AV T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + G
Sbjct: 132 LRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRDPPEG 191
Query: 190 TASTLPSKGETINVKDDSSVLK-RIGCC 216
+ P E I VK + R CC
Sbjct: 192 D-TIRPQNVEQIEVKPTMNAEGVRKQCC 218
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 170/215 (79%), Gaps = 4/215 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D + DY+FK+VLIGDS VGKS LLSRF ++EF LESKSTIGVEF TR++ +D K +KAQI
Sbjct: 5 DVKIDYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+TR TF++V RWL ELR H D N+++M++GN
Sbjct: 65 WDTAGQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL + +S E+G+ F+E+E LYFMETSALD+TNVE AFT VLT+IYKIVSK+++ A
Sbjct: 125 KSDLSNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAAD 184
Query: 187 --SNGTASTLP--SKGETINVKDDSSVLKRIGCCS 217
+ G A+ +P G I + D+ + +K+ CCS
Sbjct: 185 DPNGGLANVMPPVPSGNKILLDDELTAVKKRACCS 219
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 126/170 (74%), Positives = 153/170 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 133 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 192
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 193 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 252
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT ++
Sbjct: 253 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTGRHR 302
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 164/209 (78%), Gaps = 3/209 (1%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
RH AV T++ +AFAE+ L F+ET ALD+TNVE AF +LT+IY+IV ++ +
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQK--QMSDRRE 178
Query: 191 ASTLPSKGET-INVKDDSSVLKRIGCCSN 218
PS I+V + ++ CC N
Sbjct: 179 NDMFPSNNVVPIHVPPTTENKPKVQCCQN 207
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 164/211 (77%), Gaps = 2/211 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
++EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N RWL+ELREH D NI++ML+G
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK D +H+ V T D FA++ L F+ETSALDATNVE AF +LT+IY+IVS +A+E
Sbjct: 122 NKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKALEN 181
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
GS+ K I+ D+ ++ CC
Sbjct: 182 GSSSQNPLGDRKVIEISKTQDADAKQK--CC 210
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 170/221 (76%), Gaps = 17/221 (7%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI+++L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILLVGN 124
Query: 127 KTDLRHLVAVST-EDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV-- 183
K+DLRHL AV + +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVCPLTEARAFAERH-LSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAD 183
Query: 184 ------EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 184 RAAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 166/213 (77%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ +D +KA
Sbjct: 3 KDNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ ++++V +WL+ELR+H D NI++MLI
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLI 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DL+HL V TED + FA E L F ETSAL++TNVE AF ++LT++++IVSK++
Sbjct: 123 GNKCDLKHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKKSQS 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
SN + S +N +D + CCS
Sbjct: 183 NESNDQSQRHGSSTIEVNAINDGVKKSKSQCCS 215
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/177 (71%), Positives = 156/177 (88%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EY +VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYXXXXPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 167/210 (79%), Gaps = 3/210 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
+ ++F +VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDT
Sbjct: 76 FCFVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 135
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 136 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 195
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
LRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 196 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREN 255
Query: 190 TASTLPSKG-ETINVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 256 DMS--PSNNVVPIHVSPTTENKPKVQCCQN 283
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/167 (76%), Positives = 151/167 (90%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQ
Sbjct: 4 KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVG 123
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
NK+DLRHL AV T++ KAFAE+ +L F+ETSALD+TNVE AF +LT
Sbjct: 124 NKSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILT 170
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/170 (74%), Positives = 153/170 (90%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIW
Sbjct: 3 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAG ERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK
Sbjct: 63 DTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 122
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKI 177
+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+I
Sbjct: 123 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 172/215 (80%), Gaps = 5/215 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE YDYL+K+VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+ KV+KAQI
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ ++F+NV RWL+ELR+H DPNI+V+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL+HL AV+ E+ F+E+E + ME SAL+++NVE AF +L++IY + S+R +
Sbjct: 125 KSDLKHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQIANQ 184
Query: 187 SNGTASTLP--SKG---ETINVKDDSSVLKRIGCC 216
+ T +TLP S+G + + V DS LKR C
Sbjct: 185 HDLTKTTLPIGSQGVRVDPVRVDLDSKGLKRKSSC 219
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/169 (75%), Positives = 152/169 (89%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 83 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/206 (64%), Positives = 164/206 (79%), Gaps = 3/206 (1%)
Query: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQE 73
F +VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHL 133
RYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 134 VAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTAST 193
AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + S
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS- 179
Query: 194 LPSKGET-INVKDDSSVLKRIGCCSN 218
PS I+V + ++ CC N
Sbjct: 180 -PSNNVVPIHVPPTTENKPKVQCCQN 204
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 165/207 (79%), Gaps = 3/207 (1%)
Query: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 72
L ++VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQ
Sbjct: 53 LIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 112
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRH 132
ERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRH
Sbjct: 113 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 172
Query: 133 LVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTAS 192
L AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + S
Sbjct: 173 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS 232
Query: 193 TLPSKG-ETINVKDDSSVLKRIGCCSN 218
PS I+V + ++ CC N
Sbjct: 233 --PSNNVVPIHVPPTTENKPKVQCCQN 257
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 127/174 (72%), Positives = 156/174 (89%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ +EEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L ++ ++VKA
Sbjct: 4 RGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +F+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV 178
GNKTDL+HL V+TED +++AE+E L F+ETSAL+ATNV+ AF +L QIY+I+
Sbjct: 124 GNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRII 177
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 170/219 (77%), Gaps = 4/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M+ + DE+ F LVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K
Sbjct: 1 MSNNQNDEDTTPEF-LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 59
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI+
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV 119
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS+
Sbjct: 120 IMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 179
Query: 181 RAVEAGSNGTASTLPSKG-ETINVKDDSSVLKRIGCCSN 218
+ + S PS I+V + ++ CC N
Sbjct: 180 KQMSDRRENDMS--PSNNVVPIHVPPTTENKPKMQCCQN 216
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 170/215 (79%), Gaps = 5/215 (2%)
Query: 6 PDEEYDY---LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
++EYD VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +
Sbjct: 2 ANDEYDVSPACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A
Sbjct: 122 LVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKA 181
Query: 183 VEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCC 216
++ G G + L + + + + K K+ GCC
Sbjct: 182 LDQGEGGQ-NVLGGERKVLEISKSADEGQKKNGCC 215
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 133/216 (61%), Positives = 175/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D EY YLFK+VLIGDSGVGKSN+LSRFT+N F+L+SKSTIGVEFAT+SL+++ K +
Sbjct: 2 GGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWLRELR+H D +I++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL +VS + GKA AE+E L+F+ETSA++A NVE AF ++ ++Y IV+K+A
Sbjct: 122 MVGNKSDLTHLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVNKKA 181
Query: 183 VEAGSNGTAST-LPSKGETINVKDDSSVLKRIGCCS 217
+ A A+ LPS+G+ I++ + KR CCS
Sbjct: 182 LAAKEAAAAAAPLPSQGKAISIDSTAGNSKR-ACCS 216
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/167 (76%), Positives = 151/167 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQ 173
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTE 171
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 163/199 (81%)
Query: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRA 77
+IGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 78 ITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVS 137
ITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL AV
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 138 TEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSK 197
TE+ K+FA + L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G + A+
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGAGT 180
Query: 198 GETINVKDDSSVLKRIGCC 216
+++ D K CC
Sbjct: 181 NISLSKPADDDAAKGGKCC 199
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 172/209 (82%), Gaps = 5/209 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+ ++KSTIGVEFATRS+ ++ K++KAQIWDT
Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQERYRAIT+AYYRGAVGALLVYD+++ +++NV RWL+ELR+H D NI++ML+GNK+D
Sbjct: 67 AGQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+HL AV T++ +AFA + L F+ETSALDA+NV++AF LT IY+IVS R +E+ +N
Sbjct: 127 LKHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTLESSANP 186
Query: 190 TASTLPSKGETINVKD--DSSVLKRIGCC 216
+ PS G T++V DS+ + GCC
Sbjct: 187 IEA--PS-GNTVSVGPSLDSNAKQSNGCC 212
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 163/204 (79%), Gaps = 3/204 (1%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 175
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + S P
Sbjct: 176 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS--P 233
Query: 196 SKG-ETINVKDDSSVLKRIGCCSN 218
S I+V + ++ CC N
Sbjct: 234 SNNVVPIHVPPTTENKPKMQCCQN 257
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 166/208 (79%), Gaps = 9/208 (4%)
Query: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQER 74
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQER
Sbjct: 173 PVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 232
Query: 75 YRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLV 134
YRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL
Sbjct: 233 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 292
Query: 135 AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV----EAGSNGT 190
AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + E + +
Sbjct: 293 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPS 352
Query: 191 ASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ +P I+V + ++ CC N
Sbjct: 353 NNVVP-----IHVPPTTENKPKVQCCQN 375
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 126/166 (75%), Positives = 151/166 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 158/202 (78%), Gaps = 3/202 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFKLVLIGDSGVGKSNLLSRFT NEFNLESKSTIGVEFAT++L IDN VKAQI
Sbjct: 2 DDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQI 61
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDT+GQERYRAIT AYYRGAVGALLVYD+TR ++FQNV WL+ELR+H DPNI++ML+GN
Sbjct: 62 WDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGN 121
Query: 127 KTDLRHLV-AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
K DL V+TEDG + AEQE F+ETSALDATNV+ AF V IY + K+ ++
Sbjct: 122 KVDLSESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKTNQS 181
Query: 186 GSNGTASTLPSKGETINVKDDS 207
A+ P+ GE I ++ S
Sbjct: 182 AD--AATNQPTAGERIQLRPPS 201
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 165/214 (77%), Gaps = 15/214 (7%)
Query: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 72
+ K VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQ
Sbjct: 11 ICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRH 132
ERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRH
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRH 130
Query: 133 LVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--------E 184
L AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 131 LRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDES 190
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 191 PGNNVVDISVPPTT-------DGQKSNKLQCCQN 217
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/237 (56%), Positives = 175/237 (73%), Gaps = 29/237 (12%)
Query: 7 DEEYD-------YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
++EYD +LFK+VLIGDSG GKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+
Sbjct: 3 NDEYDVSPRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDS 62
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI
Sbjct: 63 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNI 122
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT------- 172
++ML+GNK+DLRHL AV TE+ K FA + +L F+ETSALDA+NVE AF +LT
Sbjct: 123 VIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVGI 182
Query: 173 -------------QIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+IY+IVS +A+E S G +++ + + I+++ + GCC
Sbjct: 183 SKRRSLTAILFFVEIYRIVSSKALEGESGG--ASVGERRQIIDIEKTQDTENKGGCC 237
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 126/169 (74%), Positives = 151/169 (89%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ L+GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 163/204 (79%), Gaps = 3/204 (1%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 122
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + S P
Sbjct: 123 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS--P 180
Query: 196 SKGET-INVKDDSSVLKRIGCCSN 218
S I+V + ++ CC N
Sbjct: 181 SNNVVPIHVPPTTENKPKVQCCQN 204
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/206 (63%), Positives = 165/206 (80%), Gaps = 7/206 (3%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++DNK VKAQIWDTAGQERY
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ ++ T++N RWL+EL++H D NI++ML+GNK+DLRHL A
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRA 149
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN---GTAS 192
V T++ ++FAE+ L F+ETSALD+TNVE AF +L++IY+IVS+R + + G +S
Sbjct: 150 VPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQAESEFGPSS 209
Query: 193 TLPSKGETINVKDDSSVLKRIGCCSN 218
T+ E I V ++ CC N
Sbjct: 210 TI----EPIQVLPTQQEGRQAPCCQN 231
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 153/169 (90%)
Query: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQER 74
K+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 75 YRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLV 134
YRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 135 AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 169
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/204 (64%), Positives = 163/204 (79%), Gaps = 3/204 (1%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ + S P
Sbjct: 121 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS--P 178
Query: 196 SKGET-INVKDDSSVLKRIGCCSN 218
S I+V + ++ CC N
Sbjct: 179 SNNVVPIHVPPTTENKPKMQCCQN 202
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 129/175 (73%), Positives = 148/175 (84%), Gaps = 5/175 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG EYD LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K
Sbjct: 38 MAG-----EYDLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTK 92
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWL+EL++H D NI+
Sbjct: 93 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIV 152
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
+ML+GNK+DLRHL AV TE+ K FA E L F+ETSALDA+NVENAF +LT Y
Sbjct: 153 IMLVGNKSDLRHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAFQTILTGPY 207
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 164/211 (77%), Gaps = 15/211 (7%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--------EAGS 187
V T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ + G+
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGN 180
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
N ++P D ++ CC N
Sbjct: 181 NVVDISVPPTT-------DGQKPNKLQCCQN 204
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 160/211 (75%), Gaps = 19/211 (9%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+ +D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL +V T++ K FAE+ L F+ETSALD+TNVE AF +L
Sbjct: 125 KSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNIL--------------- 169
Query: 187 SNGTASTL-PSKGETINVKDDSSVLKRIGCC 216
T L PS E I+VK + R CC
Sbjct: 170 ---TGDVLHPSNVEPIDVKPTVTADVRKPCC 197
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/204 (65%), Positives = 164/204 (80%), Gaps = 25/204 (12%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YDYLFK F+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MAAYRADDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDK 38
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD +I+
Sbjct: 39 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 98
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVS +D KAFAE+E+ +FMETSAL++ NVENAFTEVLTQIY++VS+
Sbjct: 99 IMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 158
Query: 181 RAVEAGSNGTASTLPSKGETINVK 204
+A++ G + A LP KG+TIN++
Sbjct: 159 KALDIGDDPAA--LP-KGQTINMR 179
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 168/213 (78%), Gaps = 1/213 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D + DY+FK+VLIGDS VGKS LL+RF++NEF+LESK+TIGVEF TR++ +D+K +KAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL +L V T+ + FAE+ESL F+ETSA+++TNVE AF VL++IYK+VSK+A+ A
Sbjct: 129 KSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVSKKALLAD 188
Query: 187 SN-GTASTLPSKGETINVKDDSSVLKRIGCCSN 218
N G + LP + KDD K+ GCCS+
Sbjct: 189 ENQGNSPLLPGTKIKLADKDDVIGAKKAGCCSS 221
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/210 (61%), Positives = 163/210 (77%), Gaps = 15/210 (7%)
Query: 17 VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAV 136
AITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL AV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 137 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--------EAGSN 188
T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ + G+N
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNN 180
Query: 189 GTASTLPSKGETINVKDDSSVLKRIGCCSN 218
++P D ++ CC N
Sbjct: 181 VVDISVPPTT-------DGQKPSKLQCCQN 203
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 128/202 (63%), Positives = 162/202 (80%), Gaps = 2/202 (0%)
Query: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQER 74
K L DSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQIWDTAGQER
Sbjct: 7 KPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQER 66
Query: 75 YRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLV 134
YRAITSAYYRGAVGALLVYD+++H T+ NV RWL+ELR+H D NI++ML+GNK+DLRHL
Sbjct: 67 YRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLR 126
Query: 135 AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTL 194
AV TE+ K FA + +L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G + + L
Sbjct: 127 AVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGD--SQAPL 184
Query: 195 PSKGETINVKDDSSVLKRIGCC 216
+ I+V + GCC
Sbjct: 185 GDRRPVIDVSQTPDSESKQGCC 206
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 169/217 (77%), Gaps = 4/217 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M EEYDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LE+KSTIGVEFATR+++ + K
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+ + AT+++V RW+ ELRE+ D NI
Sbjct: 61 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIE 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL VST++ K F+E+ L F+ETSALD++NVE AF +LTQIY I+S+
Sbjct: 121 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDS-SVLKRIGCC 216
+ S G +T+ S ETI + S + GCC
Sbjct: 181 ---PSHSTGPQTTIDSNTETIILPTTSEPPAAKSGCC 214
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 136/209 (65%), Positives = 166/209 (79%), Gaps = 10/209 (4%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+V+IGD VGKS LLS F +NEF+L+SK TIGVEFATRS+R ++KVVKAQIWDTA
Sbjct: 11 DYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERY AITSAYYRGA GALLVYDVTRHATF+ VGRWL+ELR+HTD NI++ML+GNK DL
Sbjct: 71 GQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKADL 130
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
RHL AVSTED KAFAE+ES++FMETSA D TNV+ +F +LT IY+I+SK+++ A +
Sbjct: 131 RHLRAVSTEDAKAFAEKESIFFMETSAQD-TNVKTSFETLLTDIYRILSKKSLVADTYVD 189
Query: 191 ASTLPS--KGETINVKDDSSVLKRIGCCS 217
+ T+ G I+V GCCS
Sbjct: 190 SLTVARLLGGTKISVGPG-------GCCS 211
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/211 (62%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++Y YLFK+VLIGDSGVGKSNLLSRF +NEFN +SKSTIGVEFATRS+ D K +K+QIW
Sbjct: 4 DDYHYLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYD+++ TF++V RWL+ELR+H D +I++ML+GNK
Sbjct: 64 DTAGQERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVGNK 123
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
+DL+ L AV TE+ K FA + L FMETSALD NVE AF ++L +YK+VS +A+E S
Sbjct: 124 SDLKSLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAMENES 183
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIG--CC 216
N A T P G++I V ++ K CC
Sbjct: 184 NRVA-TGPGAGKSITVAPTTTNAKPASGKCC 213
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 170/219 (77%), Gaps = 4/219 (1%)
Query: 3 GYKP-DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY D + DY+FK+VLIGDS VGKS LLSRF++NEF+LESK+TIGVEF TR++ +D+K
Sbjct: 4 GYHEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKT 63
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVI 123
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
MLIGNK+DL +L V T+ + +AE+E L F+ETSA+++TNVE AF VL++IYKIVSK
Sbjct: 124 MLIGNKSDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVSKN 183
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVL--KRIGCCSN 218
A+ A N + L S G IN+ D V+ KR GCCS+
Sbjct: 184 ALIADENQGGTPLLS-GTKINLTDKDDVIGSKRAGCCSS 221
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 168/219 (76%), Gaps = 6/219 (2%)
Query: 4 YKPD--EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
YK D ++ DY+FK+VLIGDS VGKS LL+RF +NEFNL+SK+TIGVEF T++L ID+K
Sbjct: 5 YKGDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKT 64
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL+ELR H D NI++
Sbjct: 65 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVI 124
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DL L AV TED K FAE+E+L+FMETSAL+ATNVE AF VLT+IY+I+SK+
Sbjct: 125 MLVGNKSDLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKK 184
Query: 182 AV----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ E S G +S L + K+ S + CC
Sbjct: 185 TLVANEEVESGGNSSLLKGTKIIVPGKEPKSEGSKYNCC 223
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 125/167 (74%), Positives = 149/167 (89%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWD
Sbjct: 1 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAG ERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ L+GNK+
Sbjct: 61 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKS 120
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY
Sbjct: 121 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF++NEF++ESK+TIGVEF TR+L ID+K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR---AV 183
KTDL L AV TED K FA++E+L+FMETSALD+ NVE +F VLT+IY+IVSK+ A
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
E G +G S+L +G I V + + K GCC
Sbjct: 189 EEGESGGDSSLL-QGTKIVVAGEETESKGKGCC 220
>gi|302142882|emb|CBI20177.3| unnamed protein product [Vitis vinifera]
Length = 171
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/217 (62%), Positives = 157/217 (72%), Gaps = 47/217 (21%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+ SKSTIGVEFATR+L +D K
Sbjct: 1 MAGYRAEDDYDYLFKV-------------------------SKSTIGVEFATRTLNVDGK 35
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATF+NV RWL+ELR HTDPNI+
Sbjct: 36 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 95
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+AE+ESLYFMETSAL+ATNVENAF EVLTQIY+IVSK
Sbjct: 96 T----------------------YAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 133
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++VE G G AS++P+KGE INVKDD+S LKR+GCCS
Sbjct: 134 KSVEGGDEGAASSVPAKGERINVKDDASALKRVGCCS 170
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 170/220 (77%), Gaps = 6/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG ++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L ID++
Sbjct: 1 MAG--AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHR 58
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F ++ RWL ELR H D NI+
Sbjct: 59 SVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIV 118
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DL AVSTED K FAE+E+L+F+ETSAL ATNVE+AF VLT+I+KI SK
Sbjct: 119 IMLVGNKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSK 178
Query: 181 RAV--EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + E SNG A +P G + V + + + CCS+
Sbjct: 179 KNMVSEPKSNGAAPAMP--GTKVLVPGPAQEIPKSKCCSS 216
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 130/209 (62%), Positives = 163/209 (77%), Gaps = 15/209 (7%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--------EAGS 187
V T++ +AFAE+ +L F+ETSALD+T VE AF +LT+IY+IVS++ + G+
Sbjct: 121 VPTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQKQIADRSAHDESPGN 180
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
N +LP DS ++ CC
Sbjct: 181 NVVDISLPPTT-------DSQRGDKLPCC 202
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 168/213 (78%), Gaps = 4/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF++NEF++ESK+TIGVEF TR+L ID K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR---AV 183
KTDL L AV TED K FA++E+L+FMETSALD+ NVE +F VLT+IY+IVSK+ A
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
E G +G S+L +G I V + + K GCC
Sbjct: 189 EEGESGGDSSLL-QGTKIVVAGEETESKGKGCC 220
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 171/215 (79%), Gaps = 7/215 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF +NEF+L+SK+TIGVEF T++L ID+K VKAQI
Sbjct: 10 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V +WL ELR+H D NI++MLIGN
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGN 129
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DL L AV TED K FA++E+L+FMETSAL+ATNVE+AF VLT+IY+++SK+A+
Sbjct: 130 KSDLGTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIAN 189
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVL--KRIGCC 216
E S G++S L KG I V + V + CC
Sbjct: 190 EQESGGSSSLL--KGTNIVVPEQEPVSGGRSFSCC 222
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/166 (74%), Positives = 149/166 (89%)
Query: 18 LIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRA 77
LIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 78 ITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVS 137
ITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GNK+DLRHL AV
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 138 TEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
T++ KAFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQI 169
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/234 (57%), Positives = 169/234 (72%), Gaps = 30/234 (12%)
Query: 10 YDYLFKLVLIGDSGVGKS-------------------------NLLSRFTKNEFNLESKS 44
+DYLFK+VLIGDSGVGKS NLLSRFT+NEFNLE+KS
Sbjct: 7 FDYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETKS 66
Query: 45 TIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNV 104
TIGVEFATRS+ +D K +KAQIWDTAGQERYRAIT+AYYRGAVGALLVYD+ +H T+ +V
Sbjct: 67 TIGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVDV 126
Query: 105 GRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVE 164
RWL+ELR+H D NI++ML+GNK+DL+HL AV T++ K FA + L F+ETSALDA+NVE
Sbjct: 127 TRWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNVE 186
Query: 165 NAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKD--DSSVLKRIGCC 216
+AF +LT IY+IVS +++E S+ PS G++I V DS+ + CC
Sbjct: 187 SAFQTILTDIYRIVSSKSLEQSSDPIK---PSSGDSITVAPSVDSNTNQNSKCC 237
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 169/210 (80%), Gaps = 3/210 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF++NEF LESK+TIGVEF TR++ +D+K +KAQI
Sbjct: 8 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF++V RWL EL+ H D NI+VML+GN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL +L AVS E+ K AE+E L+FMETSAL+ATNV++AF VLT+IY+IVSK+++ G
Sbjct: 128 KSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEG 187
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ G+ +P G T+ + + + GCC
Sbjct: 188 AGGS-QQIPIPGTTLLLSEKKE--SKTGCC 214
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 169/210 (80%), Gaps = 3/210 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF++NEF LESK+TIGVEF TR++ +D+K +KAQI
Sbjct: 8 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ TF++V RWL EL+ H D NI+VML+GN
Sbjct: 68 WDTAGQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL +L AVS E+ K AE+E L+FMETSAL+ATNV++AF VLT+IY+IVSK+++ G
Sbjct: 128 KSDLGNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEG 187
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ G+ +P G T+ + + + GCC
Sbjct: 188 AGGSQQ-VPIPGTTLLLSEKKE--SKTGCC 214
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 170/220 (77%), Gaps = 6/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG ++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L ID++
Sbjct: 1 MAG--AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHR 58
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F ++ RWL ELR H D NI+
Sbjct: 59 SVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIV 118
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DL AVSTED K FAE+E+L+F+ETSAL ATNVE++F VLT+I+KI SK
Sbjct: 119 IMLVGNKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSK 178
Query: 181 RAV--EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + E SNG A +P G + V + + + CCS+
Sbjct: 179 KNMVSEPKSNGAAPAMP--GTKVLVPGPAQEIPKSKCCSS 216
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 167/220 (75%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIG SGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ + T++N RWL+ELR+H D NI++ L+G
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRLVGT 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+ LRHL AV T++ +AF+E+ +L F+ TSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSALRHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P + N ++ CC N
Sbjct: 185 AAHDESPGNNFVDISVPPTTDGQNP-------NKLQCCQN 217
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 134/220 (60%), Positives = 164/220 (74%), Gaps = 12/220 (5%)
Query: 7 DEEYDYLFK----------LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLR 56
++EYD+LFK +VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS++
Sbjct: 3 NDEYDFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQ 62
Query: 57 IDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTD 116
+D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N RWL+ELREH D
Sbjct: 63 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHAD 122
Query: 117 PNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
NI++ML+GNK D +H+ V T D FA++ L F+ETSALDATNVE AF +LT+IY+
Sbjct: 123 KNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYR 182
Query: 177 IVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
IVS +A+E GS+ K I+ D+ ++ CC
Sbjct: 183 IVSSKALENGSSSQNPLGDRKVIEISKTQDADAKQK--CC 220
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 169/218 (77%), Gaps = 2/218 (0%)
Query: 3 GYKP-DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY D + DY+FK+VLIGDS VGKS LLSRF++NEF+LESK+TIGVEF TR++ +D+K
Sbjct: 4 GYNEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKT 63
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F +V RWL ELR H D NI++
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVI 123
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
MLIGNK+DL +L V T+ + +AE++ L F+ETSA+++TNVE AF VL++IYK VSK+
Sbjct: 124 MLIGNKSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKK 183
Query: 182 AVEAGSN-GTASTLPSKGETINVKDDSSVLKRIGCCSN 218
A+ A N G A LP T+ KDD K+ GCCS+
Sbjct: 184 ALIADENQGGAPLLPGTKITLTDKDDVIGTKKAGCCSS 221
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 140/220 (63%), Positives = 168/220 (76%), Gaps = 18/220 (8%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYDY+FK+V+IGDSGVGKS LL F +N NLESKSTIGVEFATRS+R ++KVVKAQIW
Sbjct: 6 KEYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI++ML+GNK
Sbjct: 65 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 124
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFM------ETSALDATNVENAFTEVLTQIYKIVSKR 181
DLRHL AV+TED KAFAE ES +FM ETSAL + AF VLT IY+I S++
Sbjct: 125 ADLRHLRAVATEDAKAFAEMESTFFMGNIRYGETSAL-----KEAFKNVLTDIYRIASQK 179
Query: 182 AVEAGSNGTASTLPSKGETI---NVKDDSSVLKRIGCCSN 218
+ A N + L +G+ + +V++ KR CCSN
Sbjct: 180 NLSA--NAAQTHLQGQGKVVQNDDVQEPQGKSKR-SCCSN 216
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 170/211 (80%), Gaps = 6/211 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKAQIWD 68
YDYLFK+VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+++ +NK++KAQIWD
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 67
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ +F+N+ +WL+ELR++ D NI+++L+GNK+
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 127
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL+HL ++ D +A++E L F+ETSAL+ATNVE AF ++L +IY + K+ +A N
Sbjct: 128 DLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK--QATKN 185
Query: 189 GTASTLPSKGETINVKDDSS---VLKRIGCC 216
++ +G+ INV DD+ K+ CC
Sbjct: 186 DDNLSIQPRGKKINVDDDNDKNETKKKNKCC 216
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 172/220 (78%), Gaps = 7/220 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG ++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L ID+K
Sbjct: 1 MAG---GDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHK 57
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F ++ RWL ELR H D NI+
Sbjct: 58 SVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIV 117
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DL AVSTED K FAE+E+++F+ETSAL ATNVENAF VL++I+KI SK
Sbjct: 118 IMLVGNKSDLEDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSK 177
Query: 181 R--AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A E +NG+A +L G+ + V + + + CCS+
Sbjct: 178 KNIAAEPKANGSAPSLA--GKKVLVPGPAQEIPKSKCCSS 215
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 171/220 (77%), Gaps = 7/220 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG E+ DY+FK+VLIGDS VGKS +L+RF +NEF+++SK+TIGVEF TR+L ID+K
Sbjct: 1 MAG---GEKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK 57
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F ++ RWL ELR H D NI+
Sbjct: 58 SVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIV 117
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DL AVSTED K FAE+E+L+F+ETSAL ATNVENAF VL++I+KI SK
Sbjct: 118 IMLVGNKSDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSK 177
Query: 181 R--AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A + +NG A +L G+ + V + + + CCS+
Sbjct: 178 KNMAADPKANGAAPSLA--GKKVVVPGPAQEIPKSKCCSS 215
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 163/214 (76%), Gaps = 6/214 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LLSRF +NEF+L+SK+TIGVEF T++L ID K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DL L V TED K FA+ E+L FMETSAL+ATNVE AF +LT+IY+++SK+A+
Sbjct: 129 KSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN 188
Query: 184 -EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
E S G++S L KG I V GCC
Sbjct: 189 DETDSGGSSSLL--KGTKIVVPGQEPQAASSGCC 220
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 120/197 (60%), Positives = 164/197 (83%), Gaps = 1/197 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D+++DY+FK+VLIGDSGVGKSNLLSRFTK+EFN + K+TIGVEFATRS+ DNK++KA
Sbjct: 3 RNDQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERY AITSAYYRGAVGALL+YD+T+H++F N+ +WL E+R+H +P+I+VML+
Sbjct: 63 QIWDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL V ED AFAE+ ++ F+ETSALDA+NVE F ++T+IY++++KR++
Sbjct: 123 GNKSDLKHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSM- 181
Query: 185 AGSNGTASTLPSKGETI 201
N + KGE++
Sbjct: 182 VPENNESQVSNKKGESL 198
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 167/215 (77%), Gaps = 3/215 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF +NEFN++SK+TIGVEF T++L ID K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL L AV TED + FAE+E+L+FMETSAL+ATNVE AF VLT IYKI+SK+ + A
Sbjct: 129 KSDLGSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKKTLTAN 188
Query: 187 --SNGTASTLPSKGETINVK-DDSSVLKRIGCCSN 218
++ T S+ KG I V S ++ GCC +
Sbjct: 189 TDTDSTGSSTLLKGTKIIVPGGPDSAAQKGGCCGS 223
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 125/189 (66%), Positives = 152/189 (80%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YDYLFK+VLIGDSGVGKSN+LSRFT+ EFNLES+STIGVEFAT+S+RI KVVKAQIW
Sbjct: 13 EDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYD+++ ++F N RWL+ELREH D +I+VML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNK 132
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL HL A+ E+ + F L F+ETSAL+ATNVE AF +L IYK+ S + + +
Sbjct: 133 CDLSHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSKPTPSQA 192
Query: 188 NGTASTLPS 196
G A+ PS
Sbjct: 193 AGAAAGDPS 201
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 157/198 (79%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E+YDYLFK+VLIGDSGVGKSN+LSRFT+ EFNLES+STIGVEFAT+S+RI +KVVKAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ ++F+N RWL+ELREH D +I+VML+GN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL HL AV ++ K F L F+ETSAL+ATNVE AF E+L IYK+ S +
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLR 188
Query: 187 SNGTASTLPSKGETINVK 204
+ ++ + E + V+
Sbjct: 189 AGADTPSIEEQQERMRVQ 206
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 166/214 (77%), Gaps = 7/214 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS LL+RF +NEFNL+SK+TIGVEF TR+L ID + VKAQIW
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---- 183
+DL L V TED K FAE+E+L+FMETSAL++TNVENAF VLT+IY+IVSK+ +
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192
Query: 184 EAGSNGTASTLPSKGETINVK-DDSSVLKRIGCC 216
E S+G +S L KG I V + + + CC
Sbjct: 193 EVDSSGNSSLL--KGTKIVVPGQEPAPPTKASCC 224
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 157/198 (79%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E+YDYLFK+VLIGDSGVGKSN+LSRFT+ EFNLES+STIGVEFAT+S+RI +KVVKAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ ++F+N RWL+ELREH D +I+VML+GN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL HL AV ++ K F L F+ETSAL+ATNVE AF E+L IYK+ S +
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPLR 188
Query: 187 SNGTASTLPSKGETINVK 204
+ ++ + E + V+
Sbjct: 189 AGADTPSIEEQQERMRVQ 206
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 168/213 (78%), Gaps = 4/213 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L ID+K VKAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F ++ RWL ELR H D NI++ML+GNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 125
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEA 185
+DL AVS+ED K FAE+E+L+F+ETSAL ATNVENAF VLT+I+KI SK+ A +
Sbjct: 126 SDLEEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADP 185
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+NG A +L G+ + V + + + CCS+
Sbjct: 186 KANGAAPSLA--GKKVIVPGPAQEIPKSKCCSS 216
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 173/216 (80%), Gaps = 6/216 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE YDYL+K+VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+ + KV+KAQI
Sbjct: 5 DEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ ++F+NV RWL+ELR+H DPNI+V+L+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLR+L V+ E+ AF+E+E + ME SAL+++NV+ AF +L++IY + S+R + A
Sbjct: 125 KSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLTAN 184
Query: 187 SNG-TASTLP--SKG---ETINVKDDSSVLKRIGCC 216
+ +TLP ++G + I + +S K+ CC
Sbjct: 185 QHDLNKATLPLGTQGVRVDPIRIDLNSKGSKKRSCC 220
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 166/214 (77%), Gaps = 7/214 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+ DY+FK+VLIGDS VGKS LL+RF +NEFNL+SK+TIGVEF TR+L ID + VKAQIW
Sbjct: 12 QRIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---- 183
+DL L +V+TED K FAE+E+L+FMETSAL+A NVENAF VLT+IY++VSK+ +
Sbjct: 132 SDLGTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNLVANE 191
Query: 184 EAGSNGTASTLPSKGETINVK-DDSSVLKRIGCC 216
E+ S+G +S L KG I V + + CC
Sbjct: 192 ESDSSGNSSLL--KGTKIVVPGQEPPPTSKATCC 223
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/175 (70%), Positives = 154/175 (88%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF+L+SKSTIGVEFAT+S+ + K +KAQI
Sbjct: 5 DNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+HATF+NV RWL+ELR+H + NI+VML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
K+DL+ AV TE+ A AEQ +L F+ETSALDA+ V+ AF +LT+IY++++K+
Sbjct: 125 KSDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKK 179
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 156/201 (77%), Gaps = 2/201 (0%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD T+ TF N RWL+ELREH D NI++ML+GNK D +H+ A
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRA 130
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
+ T+ G FAE L F+ETSALDATNVE AF +LT+IY+IVS +A+E G++G
Sbjct: 131 IKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALENGTSGQNPLGD 190
Query: 196 SKGETINVKDDSSVLKRIGCC 216
K I D+ ++ CC
Sbjct: 191 RKVVEITKSQDADAKQK--CC 209
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 169/220 (76%), Gaps = 6/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG ++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L ID++
Sbjct: 1 MAG--AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHR 58
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F ++ RWL ELR H D NI+
Sbjct: 59 SVKAQIWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIV 118
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DL AVSTED K FAE+E+L+F+ETSAL ATNVE+AF VLT+I+KI SK
Sbjct: 119 IMLVGNKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSK 178
Query: 181 RAV--EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + E SNG A + G + V + + + CCS+
Sbjct: 179 KNMVSEPKSNGVAPAM--AGTKVLVPGPAQEIPKSKCCSS 216
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 2 AGY-KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
GY P ++ DY+FKLVLIGDSGVGKS +LSR+ +NEF+L+SK+TIGVEF TR+L +D+K
Sbjct: 4 GGYGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHK 63
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDVTR TF ++ RWL ELR H D NI+
Sbjct: 64 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIV 123
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
++L+GNK+DL A+STED K FAE E L+F+ETSAL+A NVE AF+ VLT+I+ IV+K
Sbjct: 124 IILVGNKSDLEDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNK 183
Query: 181 RAVEAG-SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + AG NG +L K I V + G C N
Sbjct: 184 KNLVAGEGNGDPGSLAGKKIDIVPGPAQVVPTKSGMCCN 222
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 162/214 (75%), Gaps = 6/214 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LLSRF +NEF+L+SK+TIGVEF T++L ID K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DL L V TED K FA+ E+L FMETSAL+ATNVE AF +LT+IY+++SK+A+
Sbjct: 129 KSDLGSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIAN 188
Query: 184 -EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
E S G++S L KG V GCC
Sbjct: 189 DETDSGGSSSLL--KGTKXVVPGQEPQAASSGCC 220
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 126/173 (72%), Positives = 149/173 (86%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EEYDYLFK+VLIGDSGVGKSNLLSRFT++ FNLESKSTIGVEFATR++ ID KV+KAQI
Sbjct: 10 EEEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYDV +F+N+ WL+EL +H + NI+VML+GN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGN 129
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
K DLRHL +V TED + FA+Q+ L F+ETSALD+TNVE AF ++L IY IVS
Sbjct: 130 KCDLRHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVS 182
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 159/195 (81%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFNLESKSTIGVEFATR++++++K +KAQIWD
Sbjct: 10 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T++N WL EL+E+ D N+ + LIGNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGLIGNKS 129
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ + FA + L+F ETSAL++ NV+ AF E++ QIYK+V+K V+ G N
Sbjct: 130 DLEHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYKMVNKHQVDLGEN 189
Query: 189 GTASTLPSKGETINV 203
S+ KG TI++
Sbjct: 190 AKGSSGAPKGPTISL 204
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 167/216 (77%), Gaps = 5/216 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEE DYLFK VLIGDS VGKSNLLSRF+++EF L+SK TIGVEFA R++R+ +K++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATF NV +WL ELR+ +++V+L+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGN 125
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+D+ HL V +DGK AE E+LYFMETSAL+ NVE AF +++T+I++I S++++EA
Sbjct: 126 KSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQKSLEAK 185
Query: 187 SN----GTASTLPSKGETINVKDDSSVLKRIG-CCS 217
N T LP E IN+ D+ S K+ CCS
Sbjct: 186 KNETTISTIKALPVGKEVINIDDEVSATKQASYCCS 221
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 168/213 (78%), Gaps = 4/213 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I++K VKAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F ++ RWL ELR H D NI++ML+GNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 125
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEA 185
+DL AVSTED K FAE+E+L+F+ETSAL ATNVENAF VLT+I+KI SK+ A +
Sbjct: 126 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKKNMAADP 185
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+NG A +L G+ + V + + + CCS+
Sbjct: 186 RANGAAPSLA--GKKVIVPGPAQEIPKSKCCSS 216
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 166/212 (78%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF++NEF+++SK+TIGVEF T++L ID K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV TED + FAE+E+L+FMETSAL++TNVE AF +LT+IY+I+SK+++ AG
Sbjct: 129 KCDLGSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAG 188
Query: 187 SNGTASTLPS--KGETINVKDDSSVLKRIGCC 216
+ P+ KG +I V R GCC
Sbjct: 189 EEIDIGSNPALFKGTSIVVPGQDQDSGRKGCC 220
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 169/213 (79%), Gaps = 5/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF +NEF+++SK+TIGVEF T++L IDNK VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ +WL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA- 185
K DL L AV TED + FA++E+L+FMETSAL+ATNVE AF +LT+IY+I+SK+++ A
Sbjct: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTAD 188
Query: 186 --GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
++G +S L KG I + + KR GCC
Sbjct: 189 DDDADGNSSLL--KGTRIIIPSEQESGKRGGCC 219
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 165/213 (77%), Gaps = 2/213 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF +NEFNL+SK+TIGVEF T+++ +D+K VKAQI
Sbjct: 9 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V +WL ELREH D NI++ML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL L AV ED K FA++E+L+FMETSAL+ATNVE+AF VLT+IY++VSK+++ A
Sbjct: 129 KSDLESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLVAN 188
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRI--GCCS 217
+ KG I + ++ CCS
Sbjct: 189 DEYGGNNSLLKGNKIVIPGQEPEMQATNSSCCS 221
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 161/209 (77%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L ID+K VKAQIW
Sbjct: 5 EKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F ++ RWL ELR H D NII+ML+GNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNK 124
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
+DL AVSTED K FAE+E+L+F+ETSAL ATNVE+AF VL++I+KI SK+ +
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKKNIVTDP 184
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ P G+ + V + + + CC
Sbjct: 185 KANGAAPPLAGKKVLVPGPAQEIPKSKCC 213
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/211 (61%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+EYD+LFK+V+IGDSGVGK+N+L RFT++EFNL+SKSTIGVEFATR++ IDNK++KAQIW
Sbjct: 3 DEYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALL+YDVT +++N+ RWL+EL++H D NI++ML+GNK
Sbjct: 63 DTAGQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNK 122
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL+HL AV TE+ K FA Q L F+ETSALD T+V AF +LT+IY VS A +
Sbjct: 123 CDLKHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSA-AENVHA 181
Query: 188 NGTASTLPSKGETINV--KDDSSVLKRIGCC 216
N S P +G TI++ + S K CC
Sbjct: 182 NLEDSRKPQQGTTISLTPQPGDSDKKSSSCC 212
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 168/212 (79%), Gaps = 9/212 (4%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EEYDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LE+KSTIGVEFATR+++ + K +KAQ+W
Sbjct: 7 EEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVW 66
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYD+ + AT+++V RWL ELRE+ D NI +ML+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVGNK 126
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
+DLRHL VST++ K F+E+ L F+ETSALD++NVE AF +LTQIY ++S+ S
Sbjct: 127 SDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSR-----PS 181
Query: 188 NGT--ASTLPSKGETINVKDDSSVL--KRIGC 215
+G + P+ G I+ + SS ++ GC
Sbjct: 182 HGPIISDEPPAPGVQIDPSEPSSTQGGQKSGC 213
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/202 (61%), Positives = 157/202 (77%), Gaps = 1/202 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D++YDYLFK+VL GDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S+ ID + +KAQI
Sbjct: 10 DDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+T+ TF N+ WL ELR H +P+I++ML+GN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGN 129
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL + TED K +AE+ L+FMETSAL++T VENAF +L I++ V +
Sbjct: 130 KCDLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIFEAVRSHPPASN 189
Query: 187 SNGTASTLPSKGETINVKDDSS 208
+ S P++ ++ DSS
Sbjct: 190 VDMKMSPYPNQ-PIVSPNTDSS 210
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 166/233 (71%), Gaps = 16/233 (6%)
Query: 1 MAGYKPD------EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRS 54
M+G +P ++YDYLFK+VL+GDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+
Sbjct: 1 MSGRRPATWDQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRT 60
Query: 55 LRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREH 114
+++D K +KAQIWDTAGQERYRAITSAYYRGA GALLVYDVTR TF++ RWLRELR+H
Sbjct: 61 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDH 120
Query: 115 TDP-NIIVMLIGNKTDL---------RHLVAVSTEDGKAFAEQESLYFMETSALDATNVE 164
D VML+GNKTDL H AV D A AE+E L F+ETSALDATNV+
Sbjct: 121 ADGRGAAVMLVGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVD 180
Query: 165 NAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
AF +LT+IY+ VS++A+ A S G + +G+ I V S CC+
Sbjct: 181 AAFETLLTEIYRAVSRKALAASSAGDDAGAVGEGQAIQVSASDSAGLTTRCCA 233
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 170/216 (78%), Gaps = 5/216 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVK 63
+ +EE+DYLFK+VL+GDSGVGKSNLL RFT+NEF+L+SKSTIGVEFAT+++ + D KVVK
Sbjct: 4 EKEEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVVK 63
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERY+AIT+AYYRGA GALLVYD+T+ A+ +N+ RWLRELREH D ++VML
Sbjct: 64 AQIWDTAGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVML 123
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK DLRHL V E GK AE+E L F+ETSALD+TNVE AFT+++ +IY+++ K+A+
Sbjct: 124 VGNKCDLRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKAL 183
Query: 184 EAGSNGTASTLPSKGETINVKDD--SSVLKRIGCCS 217
+ T S + T+ ++D + K+ CC+
Sbjct: 184 --VNESTQSFALKQDNTVVIRDPSAAKSSKKKKCCT 217
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 167/215 (77%), Gaps = 7/215 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF +NEF ++SK+TIGVEF T++L IDNK VKAQI
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI++MLIGN
Sbjct: 68 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV ED + FA++E+L+FMETSAL++TNVE AF VLT+IY+++SK+ + A
Sbjct: 128 KCDLGSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVISKKTLTAN 187
Query: 187 ----SNGTASTLPSKGETINVK-DDSSVLKRIGCC 216
+NGT+ L KG I V D + K+ GCC
Sbjct: 188 EELDTNGTSGLL--KGTRIIVPGHDQAPAKKGGCC 220
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 165/214 (77%), Gaps = 2/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
Y+ ++ DYLFK+VLIGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+S+ ID K +K
Sbjct: 3 YQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKELK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TF+NV RW EL+ H+D N++VML
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL H+ V+ E+ A AE+ ++YFMETSAL+A NV AF VL +I+KIVSK+A+
Sbjct: 123 VGNKSDLAHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A N +T+ + G+ + DD++ + CCS
Sbjct: 183 TADPN-KGNTVVASGQRLAGSDDTTP-RTTACCS 214
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/214 (61%), Positives = 166/214 (77%), Gaps = 15/214 (7%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +K+QIWDTAGQERY
Sbjct: 19 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQERY 78
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYDV++H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 79 RAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRA 138
Query: 136 VSTEDGKAFA---------EQESLYFMETSALDATNVENAF----TEVLTQIYKIVSKRA 182
V TE+ K FA + +L F+ETSALDA+NVE AF T++L +I++IVS +A
Sbjct: 139 VPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQNILTDLLAEIFRIVSSKA 198
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+E+G + K I DS K+ GCC
Sbjct: 199 LESGDSSANQLGDRKVVEITKTPDSE--KKQGCC 230
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 148/173 (85%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT++ F+LESKSTIGVEFATR++ ID KV+KAQI
Sbjct: 10 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELR+H + NI++ML+GN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
K DLRHL V TED + FA+Q+ L F+ETSALD+TNVE AF ++L IY IVS
Sbjct: 130 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVS 182
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 148/173 (85%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT++ F+LESKSTIGVEFATR++ ID KV+KAQI
Sbjct: 10 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELR+H + NI++ML+GN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
K DLRHL V TED + FA+Q+ L F+ETSALD+TNVE AF ++L IY IVS
Sbjct: 130 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVS 182
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 163/215 (75%), Gaps = 4/215 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+ DY+FK+VLIGDS VGKS LL+RF +N+FNL+SK+TIGVEF TR+L ID + VKAQIW
Sbjct: 12 QRIDYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++ML+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---- 183
+DL L AV ED K FAE+E+L+FMETSAL+A NVENAF VLT+IY+ VSK+ +
Sbjct: 132 SDLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANE 191
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
E S+G +S L + ++ S LK C S+
Sbjct: 192 EPDSSGNSSLLKGTKIVVPGQEPPSTLKATCCMSS 226
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 165/211 (78%), Gaps = 3/211 (1%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS +LSRF ++EF+L+SK+TIGVEF TR++ I++K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF +V RWL ELR H D NI++ML+GNK DL
Sbjct: 68 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVGNKCDL 127
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS--- 187
+L AV TED K FA++E L+F+ETSA++ATNVE AF VLT+I+KIVSK+++ A
Sbjct: 128 DNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQDQG 187
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
NG ++L + ++ + K+ CC++
Sbjct: 188 NGNHASLSGTSIVVPGQEQDTTTKKKSCCTS 218
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 167/214 (78%), Gaps = 4/214 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF++N+FN++SK+TIGVEF T++L IDNK VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K DL L AV TED + FA++E+L+FMETSAL++TNVE AF +LT+IY+++SK+ +
Sbjct: 129 KCDLGTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 188
Query: 184 -EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
EA G + L + +D S+ K+ GCC
Sbjct: 189 DEADPGGGSGLLKGTRIIVPNQDASAYEKKGGCC 222
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 125/199 (62%), Positives = 161/199 (80%), Gaps = 4/199 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT N+FNLESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K FA++ L F ETSAL++ NV+ AF E++T IY+++SK V+ GS+
Sbjct: 129 DLSHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGSD 188
Query: 189 ----GTASTLPSKGETINV 203
G ++ KG TI++
Sbjct: 189 NNGSGNGASNNIKGPTISL 207
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 148/173 (85%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK+VLIGDSGVGKSNLLSRFT++ F+LESKSTIGVEFATR++ ID KV+KAQI
Sbjct: 21 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 80
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELR+H + NI++ML+GN
Sbjct: 81 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 140
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
K DLRHL V TED + FA+Q+ L F+ETSALD+TNVE AF ++L IY IVS
Sbjct: 141 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVS 193
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 162/209 (77%), Gaps = 3/209 (1%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS +L+RF +NEF+L+SKSTIGVEF TR+L ID+K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++LIGNK DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDL 134
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---EAGS 187
+ V TED K FAE+E L+F+ETSAL+ATNVE+AFT VLT+IY IV+K+++ E+
Sbjct: 135 VNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQG 194
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
NG +++L + I KR CC
Sbjct: 195 NGNSASLSGQKIIIPGPAQEIPAKRNMCC 223
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 161/211 (76%), Gaps = 3/211 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T++N WL+ELR++ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T + K FA + L F ETSAL++ NV+ AF E++T IY++VSK V+ G +
Sbjct: 129 DLAHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 189 GTASTLPSKGETINVKDDSSVLKR---IGCC 216
G + KG TI++ + K+ CC
Sbjct: 189 GNNAAAAPKGPTISLTPTPNENKKSSSSNCC 219
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/214 (58%), Positives = 161/214 (75%), Gaps = 4/214 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+ DY+FK+V+IGDS VGKS +LSRF KNEF+L+SKSTIGVEF TR++ IDNK +K QI
Sbjct: 9 DQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTIKTQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F +V RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLR + AV ED K FA++E L+F ETSAL+A NVE AF LT+IY+IVS++A+ A
Sbjct: 129 KCDLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKALTAN 188
Query: 187 S---NGTASTLPSKGETINVKDDSSV-LKRIGCC 216
NG A+ L ++ + + +K+ CC
Sbjct: 189 EEERNGNAAALTGTKIALSSPEQPVMTVKKRSCC 222
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/170 (71%), Positives = 146/170 (85%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E+YDYLFK+VLIGDSGVGKSN+LSRFT+ EFNLES+STIGVEFAT+S+RI +KVVKAQI
Sbjct: 9 EEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ ++F+N RWL+ELREH D +I+VML+GN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
K DL HL AV ++ K F L F+ETSAL+ATNVE AF E+L IYK
Sbjct: 129 KCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYK 178
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 167/212 (78%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE+ DYLFK VLIGDSGVGKSNL+SRF K+EF L+SK TIGVEFA R++++ +K++KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD+T+ ATF NVG+WL ELRE +++V+L+GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL V E+GK FAE E L FMETSAL NV+ AF E++T+I+ I+S++++E
Sbjct: 128 KSDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIG-CCS 217
NGTA LPS G+ I++ D+ + K+ CCS
Sbjct: 188 MNGTALNLPS-GKEIHIADEVTATKQAKYCCS 218
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 166/214 (77%), Gaps = 4/214 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+ + DY+FK+VL+GDS VGK+ LL+RF KN+FN++SK+TIGVEF T++L ID K VKAQI
Sbjct: 9 NHKIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYDVTR +F N+ +WL ELR H D NI+VMLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV TED + FA++E+L+FMETSAL++TNVE AF +LT+IY++VSK+ + A
Sbjct: 129 KCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKKTLTAN 188
Query: 187 SNGTASTLPS--KGETINV--KDDSSVLKRIGCC 216
+ S + KG I V +D ++ K+ GCC
Sbjct: 189 DDADPSGISGLLKGTKIIVPSQDINAGEKKGGCC 222
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 160/210 (76%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS L+RF +NEFN +SK+TIGVEF T++L +DNK VKAQI
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTVKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D +II+MLIGN
Sbjct: 68 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSIIIMLIGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV TED + FA++E+L+FMETSAL+ATNVE AF VLT+IY+I+SK+ +
Sbjct: 128 KCDLGSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIISKKTLAGN 187
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ KG I V + ++ GCC
Sbjct: 188 DKSDGNPGVFKGTRILVPSQAQNSEKKGCC 217
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 162/212 (76%), Gaps = 3/212 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI+++LIGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG- 186
TDL AV TED K FAE+E L+F+ETSAL+ATNVENAF VLT+I+ IV+K+ + AG
Sbjct: 132 TDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLVAGE 191
Query: 187 --SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+NG ++L K TI K CC
Sbjct: 192 DQANGNPASLTGKRITIPGPAQEIPAKSNMCC 223
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/228 (57%), Positives = 169/228 (74%), Gaps = 19/228 (8%)
Query: 2 AGY-KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
GY P ++ DY+FKLVLIGDSGVGKS +LSR+ +NEF+L+SK+TIGVEF TR+L ID+K
Sbjct: 5 GGYGDPSQKIDYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHK 64
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYDVTR TF ++ RWL ELR + D NI+
Sbjct: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIV 124
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
++L+GNK+DL A+S ED K FAE+E L+F+ETSAL+A NVE+AF+ VLT+I+ IV+K
Sbjct: 125 IILVGNKSDLEDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNK 184
Query: 181 RAVEAG---SNGTASTL--------PSKGETINVKDDSSVLKRIGCCS 217
+++ AG NG +L P G+ I K+ CC+
Sbjct: 185 KSLVAGEGEGNGDPGSLAGKKIDIVPGPGQVIPTKNKL-------CCN 225
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 162/211 (76%), Gaps = 7/211 (3%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF +NEF+L+SK+TIGVEF TR+L++D + +KAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTA 75
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D N+++MLIGNK+DL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNKSDL 135
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV----EAG 186
L V TED K FA +ESL+FMETSAL+ATNVENAF LT+IY+ VSK+ + E
Sbjct: 136 GTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANEETD 195
Query: 187 SNGTASTLPSKGETINVK-DDSSVLKRIGCC 216
S+G +S L KG I V + + + CC
Sbjct: 196 SSGNSSLL--KGTKIIVPGQEPAPPAKAACC 224
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 163/213 (76%), Gaps = 4/213 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L ID+K VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++LIGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
+DL AV TED K FA++E L+F+ETSAL ATNVENAF VLT+I+ IV+K+ + AG
Sbjct: 132 SDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKNLVAGE 191
Query: 188 ---NGTASTLPSKGETINVKDDSSVLKRIGCCS 217
NG ++L K + I + + CCS
Sbjct: 192 DQINGNPASLSGK-KIIIPGPAQEIPAKSKCCS 223
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 165/215 (76%), Gaps = 12/215 (5%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++YDYLFK+VLIGDSGVGK+NLL RFT+NEFNLESKSTIGVEFATRS+++DNKV+KAQIW
Sbjct: 3 DDYDYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIW 62
Query: 68 DTAGQERYRAITS-----AYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
DT Y TS +YYRGAVGALL YD+++H+TF++V RWL+ELR+H D NI++M
Sbjct: 63 DTG---NYFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIM 119
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DLRHL AV T++ K FA + L F+ETSALDATNVE +F +LT+I++IVS +A
Sbjct: 120 LVGNKSDLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSNKA 179
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRI-GCC 216
+E +N P+ G+TI V K GCC
Sbjct: 180 LETSNNAIK---PTGGQTILVSQSPDEPKPSGGCC 211
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 164/210 (78%), Gaps = 5/210 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+ Y+++FK+VLIG+SGVGKSNLLSRFTKNEF +S++TIGVEF+TR++RIDN +KAQI
Sbjct: 4 DDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+++H T+++ RWL+EL +H DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL +L V T++ + FAE++ L FMETSALD+TNVE AF+EVLT I+ V+ R V G
Sbjct: 124 KSDLENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVASREVTRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
S + G + +++ R GCC
Sbjct: 184 SISAVTLSSPIGPSSEAQEE-----RKGCC 208
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 162/211 (76%), Gaps = 3/211 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ +T++N WL EL+E+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K FA + L F ETSAL++ NV+ AF E++T IY++VSK V+ G +
Sbjct: 129 DLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 189 GTASTLPSKGETINVKDDSSVLKRI---GCC 216
T+ KG TI++ + K+ CC
Sbjct: 189 NTSGATAPKGPTISLTPAPNENKKSSSNNCC 219
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 166/215 (77%), Gaps = 6/215 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 69
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI++MLIGNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNK 129
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR---AVE 184
TDL AV TED K FA++E L+F+ETSA++ATNVE+AF VLT+I+ IV+K+ A E
Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKNLAADE 189
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLK-RIGCCSN 218
SNG ++L G+ I V V+ + CCS+
Sbjct: 190 NQSNGNPASL--TGKKILVPGPGQVIPGKKACCSS 222
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 159/210 (75%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF +NEF ++SK+TIGVEF T++L + NK VKAQI
Sbjct: 8 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D +II+MLIGN
Sbjct: 68 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIMLIGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV ED K FA++E+L+FMETSAL+ATNVE AF +LT+IY+I+SKR +
Sbjct: 128 KCDLGSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIISKRTLAGN 187
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
++ KG I V ++ GCC
Sbjct: 188 DESNENSGAFKGTRILVPSQEQNSEKKGCC 217
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 163/212 (76%), Gaps = 9/212 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE Y+++FK+VLIG+SGVGKSNLLSRFTKNEFN +S++TIGVEF+TR+++++N +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H T+++V RWL+EL EH DP+I+VMLIGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL +V TE+ K FAE++ L F+ETSALD+TNVE AFT VL +I+K VS + V G
Sbjct: 124 KSDLESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVVRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
P T+N K+ CC N
Sbjct: 184 --------PMSAVTLNSPKAEDTEKK-PCCKN 206
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 164/213 (76%), Gaps = 4/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQI
Sbjct: 11 NQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI+++LIGN
Sbjct: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGN 130
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL + V TED K FAE+E L+F+ETSAL+ATNVE AF VLT+I+ IV+K+ + AG
Sbjct: 131 KSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVNKKNLAAG 190
Query: 187 ---SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
NG A++L K + I + KR CC
Sbjct: 191 DNQGNGNAASLSGK-QIIVPGTAQEIPKRSMCC 222
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 158/211 (74%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+S+ ID + +KAQI
Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+T+ TF N+ WL ELR + + +++VML+GN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVMLVGN 129
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DLRHL V TED K +AE+ L+FMETSAL++T VENAF +L I++ V R+
Sbjct: 130 KCDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAV--RSHPPV 187
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
SN P + I + S CCS
Sbjct: 188 SNVDMKMSPYNNQPIVSPNTDSSKSGRRCCS 218
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 164/209 (78%), Gaps = 3/209 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
+DYLFK V++GDSGVGK+N+LSRFT+NEF+++SKSTIGV+FAT+ + +DNKVVKAQ+WDT
Sbjct: 7 HDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQ+RYRAIT+AYYRGAVGALLVYD+TR T+ N+ RWL+ELR+ D N ++ML+GNK+D
Sbjct: 67 AGQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSD 126
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L+H+ AVSTE+ AF+ + L F+ETSALD++NV+ AF V+ I+KIVS + +E N
Sbjct: 127 LKHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQLERSENE 186
Query: 190 TASTLPSKGETINVKDDSSV-LKRIGCCS 217
++ P G I + + + + GCCS
Sbjct: 187 VSA--PGAGAPIKIDNSTETQTTKGGCCS 213
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/215 (59%), Positives = 162/215 (75%), Gaps = 4/215 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+ DY+FK+VLIGDS GKS LL+RF +N+FNL+SK+TIGVEF TR+L ID + VKAQIW
Sbjct: 12 QRIDYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++ML+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---- 183
+DL L AV ED K FAE+E+L+FMETSAL+A NVENAF VLT+IY+ VSK+ +
Sbjct: 132 SDLGTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANE 191
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
E S+G +S L + ++ S LK C S+
Sbjct: 192 EPDSSGNSSLLKGTKIVVPGQEPPSTLKATCCMSS 226
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/170 (67%), Positives = 149/170 (87%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+ YDYL+K+VLIGDSGVGKS+LLSRFT+NEF++ESKSTIGVEFATRS++++ K++KAQ+W
Sbjct: 7 DHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVW 66
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGA+LVYD+T+ TFQ+V RWL E+REH DP I+VML+GNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNK 126
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKI 177
DL+HL AV+++D K + ++ L F+E SALDATNVE AF + +T+++ +
Sbjct: 127 CDLKHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHV 176
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 167/215 (77%), Gaps = 6/215 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIW 69
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI++MLIGNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNK 129
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG- 186
TDL AV TED K FA++E L+F+ETSA++ATN+E+AF VLT+I+ IV+K+ + A
Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADD 189
Query: 187 --SNGTASTLPSKGETINVKDDSSVL-KRIGCCSN 218
SNG ++L G+ I V V+ ++ CCS+
Sbjct: 190 NQSNGNPASL--TGKKILVPGPGQVIPEKKACCSS 222
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 165/231 (71%), Gaps = 30/231 (12%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAF----TE---------------------- 169
V T++ +AFAE+ L F+ETSALD+TNVE AF TE
Sbjct: 127 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEKNGLSFIETSALDSTNVEAAFQ 186
Query: 170 -VLTQIYKIVSKRAVEAGSNGTASTLPSKG-ETINVKDDSSVLKRIGCCSN 218
+LT+IY+IVS++ + S PS I+V + ++ CC N
Sbjct: 187 TILTEIYRIVSQKQMSDRRENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 235
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 163/195 (83%), Gaps = 3/195 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKAQIWD 68
YDYLFK+VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+++ +NK++KAQIWD
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 67
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ +F+N+ +WL+ELR++ D NI+++L+GNK+
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 127
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL+HL ++ + FA++E L F+ETSAL+ATNVE AF ++L +IY + K+ + N
Sbjct: 128 DLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK--QGTKN 185
Query: 189 GTASTLPSKGETINV 203
+ ++ +G+ INV
Sbjct: 186 EDSMSIQPRGKKINV 200
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/179 (69%), Positives = 146/179 (81%), Gaps = 1/179 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++YDYLFK+VL+GDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ I NK++KAQIW
Sbjct: 6 DDYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT TF NV +WL ELR+H D NI++ML+GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNK 125
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK-RAVEA 185
DL L + + FA+ E L F+ETSALDATNVE AF L+ +Y +VSK +AV A
Sbjct: 126 CDLAQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSKNQAVNA 184
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/214 (59%), Positives = 163/214 (76%), Gaps = 7/214 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+ DY+FK+VLIGDS VGKS LL+RF +NEF+L+SK+TIGVEF TR+L++D + +KAQIW
Sbjct: 12 QRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D N+++MLIGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---- 183
+DL L V TED K FA +ESL+FMETSAL+ATNVENAF LT+IY+ VSK+ +
Sbjct: 132 SDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANE 191
Query: 184 EAGSNGTASTLPSKGETINVK-DDSSVLKRIGCC 216
E S+G +S L KG I V + + + CC
Sbjct: 192 ETDSSGNSSLL--KGTKIIVPGQEPAPPAKAACC 223
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 164/212 (77%), Gaps = 4/212 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EF+LESKSTIGVEFATR++ +D K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K FA++ L F ETSAL++ NV+ AF E++T IY+++SK V+ G +
Sbjct: 129 DLSHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGVD 188
Query: 189 GTASTL-PSKGETINVKDDSSVLKRI---GCC 216
+TL KG TI++ + K+ CC
Sbjct: 189 NNNNTLNAPKGPTISLTPAPNEKKKSSSNNCC 220
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 121/147 (82%), Positives = 136/147 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ DE+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 VLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQ 147
VML+GNK DLRHL AVSTE+ FAE+
Sbjct: 121 VMLVGNKADLRHLRAVSTEETTNFAER 147
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 162/212 (76%), Gaps = 2/212 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YDYL+K+VLIGDSGVGKSNLLSRFT+NEFNLE+KSTIGVEFATR++ + K +KAQIW
Sbjct: 9 EDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIW 68
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPN--IIVMLIG 125
DTAGQERYRAITSAYYRGAVGALLVYD+ + AT+++V RWL ELRE+ D N I +ML+G
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVG 128
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DLRHL VST++ K FAE+ L F+ETSALD++NV+ AF +LTQI +S+
Sbjct: 129 NKSDLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPTPIG 188
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+G PS G +++ D+ + C+
Sbjct: 189 APSGHDDNSPSIGTPVDISSDTKKPNQGNNCA 220
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 166/212 (78%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE+ DYLFK VLIGDSGVGKSNL+SRF K+EF L+SK TIGVEFA R++++ +K++KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD+T+ ATF NVG+WL ELRE +++V+L+GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL V E+GK AE E L FMETSAL NV+ AF E++T+I+ I+S++++E
Sbjct: 128 KSDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIG-CCS 217
NGTA LPS G+ I++ D+ + K+ CCS
Sbjct: 188 MNGTALNLPS-GKEIHIADEVTATKQAKYCCS 218
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 166/214 (77%), Gaps = 2/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
Y+ ++ DYLFK+VLIGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+S+ ID K VK
Sbjct: 3 YQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQER+RA+TSAYYRGAVGAL+V+D+TR TF+NV RWL EL+ H+D +++VML
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL H+ V+ E+ A AE ++ FMETSAL++ NV AF VL +I+KIVSK+A+
Sbjct: 123 VGNKSDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A N ++T+ + G+ + DD++ + GCCS
Sbjct: 183 TADPN-KSNTVVASGQRLAGGDDTTP-RTGGCCS 214
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 165/199 (82%), Gaps = 3/199 (1%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKA 64
++ YDYLFK+VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+++ +NK++KA
Sbjct: 4 KEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+N+ +WL+ELR++ D NI+++L+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL ++ + FA++E L F+ETSAL+ATNVE AF ++L +IY + K+ +
Sbjct: 124 GNKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK--Q 181
Query: 185 AGSNGTASTLPSKGETINV 203
N + ++ +G+ INV
Sbjct: 182 GTKNEDSMSIQPRGKKINV 200
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 121/180 (67%), Positives = 149/180 (82%), Gaps = 1/180 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M+G + D+ YDYLFK+VL+GDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ + NK
Sbjct: 1 MSG-ETDDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNK 59
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT T+ N+ +WL ELR+H D +I+
Sbjct: 60 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIV 119
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DL HL + FAE+E L F+ETSAL+ATNVE+AF + L ++Y +VSK
Sbjct: 120 IMLVGNKCDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSK 179
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 162/215 (75%), Gaps = 3/215 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SKSTIGVEF TR+L ID+K VKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++L GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL + V TED K FAE+E L+F+ETSAL+ATNVE AF VLT+IY IV+K+ + A
Sbjct: 134 KCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 187 SN-GTASTLPSKGETINVKDDSSVL--KRIGCCSN 218
N G ++ G+ I V + + KR CC +
Sbjct: 194 ENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 228
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 160/210 (76%), Gaps = 2/210 (0%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K FA++ L F ETSAL++ NV+ AF E++T IY++VSK V+
Sbjct: 129 DLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLNEY 188
Query: 189 GTASTLPSKGETINVKDDSSV--LKRIGCC 216
G + KG TI++ + K CC
Sbjct: 189 GNNAGQAPKGPTISLTPAPAKKNKKSDNCC 218
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 154/190 (81%)
Query: 27 SNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGA 86
SNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQIWDTAGQERYRAITSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 87 VGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAE 146
VGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL AV TE+ K+FA
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 147 QESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDD 206
+ L F+ETSALDA+NVE AF +LT+IY+IVS +A+++G + A+ +++ D
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGAGTNISLSKPAD 187
Query: 207 SSVLKRIGCC 216
K CC
Sbjct: 188 DDAAKGGKCC 197
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 165/216 (76%), Gaps = 6/216 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ DEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+ V WL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVIMLI 121
Query: 125 GNKTDLRHLVAVSTEDGKAFA-EQESLYFMETSALDATNVENAFTEVLT-QIYKIVSKRA 182
GNKTDL+H AV TED + F +++L F+ETSAL ATNVE AF +L + I+SK++
Sbjct: 122 GNKTDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIISKKS 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ S+ A ++ + V S + CCSN
Sbjct: 182 L--SSDEPAPSVIKEAVKHIVVGGSEANTKKPCCSN 215
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 164/216 (75%), Gaps = 5/216 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M G +PD +L K+VLIGDSGVGK+NLLSRF +++FN +SKSTIGVEFAT++L I+ K
Sbjct: 1 MEGSEPD----FLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGK 56
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRAITSAYYRGA+GALL+YD+T TF ++ RWL+ELRE+ D NI+
Sbjct: 57 TVKAQIWDTAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIV 116
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DL+ L AVSTEDG F++QE+L F+ETSA +ATNV+ AFT ++T+I +SK
Sbjct: 117 VMLVGNKSDLQELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSK 176
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ + + A P+KG TI K+ CC
Sbjct: 177 QNI-VSPDSPAKVGPNKGVTITSTTADDKKKKNTCC 211
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 118/161 (73%), Positives = 144/161 (89%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+ +D+K VKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+++HAT+ NV RWL+ELR+H D NI++ML+GNK+DL+HL A
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
V TE+ K F+ + L F+ETSALDA+NVE+AF +LT +Y+
Sbjct: 121 VPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 126/212 (59%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++V RWL+ELREH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K+FA + +L F E SAL + NV+ +F ++L IY+++SK ++ ++
Sbjct: 131 DLDHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDT-ND 189
Query: 189 GTASTLPSKGETINVKDDSSVLKRIG----CC 216
S+ PS G TI++ + KR G CC
Sbjct: 190 TVGSSKPSGGPTISLT-PAPQEKRSGKNSNCC 220
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 122/176 (69%), Positives = 148/176 (84%), Gaps = 1/176 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VLIGDSGVGKSNLLSRFT+N+F+LE+KSTIGVEFATRS+ I+ K +KA I
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTD-PNIIVMLIG 125
WDTAGQERYRAITSAYYRG +GAL+VYD+ +H TF+N+ RWL+ELR H D +I +ML+G
Sbjct: 66 WDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVG 125
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
NKTDLRHL AV T++ FAE+ + F+ETSALD+TNVE A +LT IYK VS +
Sbjct: 126 NKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTK 181
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 162/215 (75%), Gaps = 3/215 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SKSTIGVEF TR+L ID+K VKAQI
Sbjct: 7 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 66
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++L GN
Sbjct: 67 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 126
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL + V TED K FAE+E L+F+ETSAL+ATNVE AF VLT+IY IV+K+ + A
Sbjct: 127 KCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 186
Query: 187 SN-GTASTLPSKGETINVKDDSSVL--KRIGCCSN 218
N G ++ G+ I V + + KR CC +
Sbjct: 187 ENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 221
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 164/217 (75%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA D+E DYLFK VLIGDS VGKSNLLSRF+++EF L+SK TIGVEFA R++++ +K
Sbjct: 1 MAADSFDDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+TR ATF+N+ +WLRELR+ P+++
Sbjct: 61 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
++L+GNK+DL H V E+GK AE E L FMETSAL+ NVE AF ++T+I+++ S+
Sbjct: 121 IVLVGNKSDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQ 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ +EA N L E I+V + S K+ CCS
Sbjct: 181 KNLEAKLNEPVKPLIIGKEIIHVDHEVSATKQSSCCS 217
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/225 (58%), Positives = 165/225 (73%), Gaps = 9/225 (4%)
Query: 1 MAG----YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLR 56
MAG Y P DY+FK+VLIGDS VGKS LL+RF +NEF+L+SK+TIGVEF TR+L
Sbjct: 1 MAGSYGDYGP--RIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLV 58
Query: 57 IDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTD 116
ID+K VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF +V RWL ELR H D
Sbjct: 59 IDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHAD 118
Query: 117 PNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
NI++MLIGNK DL +L AV ED + FA++E L+F+ETSAL+A NVE+AF VLT IY+
Sbjct: 119 NNIVIMLIGNKCDLGNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYR 178
Query: 177 IVSKRAVEAG---SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
I+SK+A+ A NG ++ L + ++ CCS+
Sbjct: 179 IISKKALIANDDQGNGNSALLTGTKLVVPGEEQDVSTNNKYCCSS 223
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 142/157 (90%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 57 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 116
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 117 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 176
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
V T++ +AFAE+ +L F+ETSALD+TNVE AF +LT
Sbjct: 177 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 213
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/157 (75%), Positives = 142/157 (90%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL A
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
V T++ +AFAE+ +L F+ETSALD+TNVE AF +LT
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 157
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 162/211 (76%), Gaps = 5/211 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNL+S+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K FA + SL F E SAL++ NV+ +F ++L IY+++SK +E
Sbjct: 131 DLDHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLETDDQ 190
Query: 189 GTASTLPSKGETIN---VKDDSSVLKRIGCC 216
+A PS G TI+ V + CC
Sbjct: 191 PSAK--PSSGATISLTPVPQEKKSKNNANCC 219
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 151/192 (78%), Gaps = 6/192 (3%)
Query: 28 NLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAV 87
NLLSRFT+NEFNLESKSTIGVEFATRS+ +D K VKAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 88 GALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQ 147
GALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DL+HL AVST++ K FA +
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 148 ESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINV---K 204
L F+ETSALDA+NVE+AF +LT IY+IVS +++E+ + PS GETI V
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIK---PSGGETILVAPTA 193
Query: 205 DDSSVLKRIGCC 216
DD CC
Sbjct: 194 DDGGAKSGSKCC 205
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/161 (73%), Positives = 143/161 (88%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+ +D K VKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+++HAT+ NV RWL+ELR+H D NI++ML+GNK+DL+HL A
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
V TE+ K F+ + L F+ETSALDA+NVE+AF +LT +Y+
Sbjct: 121 VPTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/233 (57%), Positives = 166/233 (71%), Gaps = 16/233 (6%)
Query: 1 MAGYKPD------EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRS 54
M+G +P ++YDYLFK+VL+GDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+
Sbjct: 1 MSGRRPATWDQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRT 60
Query: 55 LRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREH 114
+++D K +KAQIWDTAGQERYRAITSAYYRGA GALLVYDVTR TF++ RWLRELR+H
Sbjct: 61 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDH 120
Query: 115 TDP-NIIVMLIGNKTDL---------RHLVAVSTEDGKAFAEQESLYFMETSALDATNVE 164
D VML+GNKTDL H AV D A AE+E L F+ETSALDATNV+
Sbjct: 121 ADGRGAAVMLVGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVD 180
Query: 165 NAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
AF +LT+IY+ VS++A+ A S G + +G+ I V S CC+
Sbjct: 181 AAFETLLTEIYRAVSRKALAASSAGDDAAAVGEGQAIQVSAGDSAGLTTRCCA 233
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/211 (59%), Positives = 161/211 (76%), Gaps = 4/211 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT N+FN+ESKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K FA++ L F ETSAL + NV+ AF E++T IY++VSK V+ G
Sbjct: 129 DLDHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQVDLGDA 188
Query: 189 GTASTLPSKGETINVKDDSSVLKRI---GCC 216
T P KG TI++ + K+ CC
Sbjct: 189 NTQGNAP-KGPTISLTPAPNENKKKSANNCC 218
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 162/215 (75%), Gaps = 2/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y D+ DYLFK+VLIGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ I K +
Sbjct: 2 AYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKEI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+NVGRWL ELR H+D +++VM
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DL ++ VS E+ A+ E + F+ETSA+DATNV NAF V+ +IY++VSK+
Sbjct: 122 LVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKP 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ + ++ ++T+ + + DD+ K CCS
Sbjct: 182 LASSTSMKSNTVLGSSQRLAGIDDTQPKK--NCCS 214
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
Y D+ DYLFK+VLIGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ ID K +
Sbjct: 2 AYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKEI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF NVGRWL ELR H+D +++VM
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DL ++ VS E+ A+ E + F+ETSA+DATNV NAF V+ +IY++VSK+
Sbjct: 122 LVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKP 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ + + ++T+ + + DD + + CCS
Sbjct: 182 LTSSVSMKSNTVLGSSQRLAGIDD--IQPKRNCCS 214
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 166/218 (76%), Gaps = 3/218 (1%)
Query: 2 AGY-KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
AGY +++ DY+FK+VLIGDS VGKS +L+RF +N+F+++SK+TIGVEF TR+L I++K
Sbjct: 4 AGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHK 63
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI+
Sbjct: 64 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIV 123
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
++LIGNK+DL AV TED K FAE+E L+F+ETSAL ATNVE AF VLT+I+ IV+K
Sbjct: 124 IILIGNKSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNK 183
Query: 181 RAVEAGSN-GTASTLPSKGETINVKDDSS-VLKRIGCC 216
+ + A N G ++ G+ I V + + K+ CC
Sbjct: 184 KNLAADENQGNGNSASLSGKKIIVPGPAQEIPKKSMCC 221
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/163 (72%), Positives = 145/163 (88%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+TKNEFNLESKSTIGVEFATRS++ DNK +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLVYD+++HAT++NV +WL+ELR+H DP+I++ML+GNK+DLRHL
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV 178
V TE+ K FA++ +L F+ETSAL +TNVE AF +L +IYK V
Sbjct: 121 VPTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNV 163
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 162/216 (75%), Gaps = 15/216 (6%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF ++EF+++SK+TIGVEF TR+L I+ K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL ELR H D NI+++LIGNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEAGSN 188
AV TED K FAE+E L+F+ETSAL+ATNVEN+F ++TQIY V+K+ A E SN
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 189 GTAS------TLPSKGETINVKDDSSVLKRIGCCSN 218
S +P+ G+ I K + CC++
Sbjct: 195 NPGSLAGKKILIPASGQEIPAKTST-------CCTS 223
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 168/229 (73%), Gaps = 19/229 (8%)
Query: 2 AGY-KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
GY P ++ DY+FK+VLIGDS VGKS +L+R+ ++EF+L+SK+TIGVEF TR+L ID+K
Sbjct: 5 GGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHK 64
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TR TF ++ RWL ELR H D NI+
Sbjct: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIV 124
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
++LIGNK+DL A+ TED K FAE+E L+F+ETSA +ATNVE+AF+ VLT+I+ IV+K
Sbjct: 125 IILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNK 184
Query: 181 RAVEAG---SNGTASTL--------PSKGETINVKDDSSVLKRIGCCSN 218
+++ A NG +L P G+ I K + CC++
Sbjct: 185 KSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNM-------CCNS 226
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ SKSTIGVEFATR++ ++ K VKAQIWD
Sbjct: 10 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKS 129
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K +A++ + F ETSAL+A NV+ AF E++T IY++VSK V+ N
Sbjct: 130 DLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSEN 189
Query: 189 GTASTLPSKGETINV---KDDSSVLKRIGCC 216
+ T+P +G TI++ + S K CC
Sbjct: 190 NGSGTVP-RGPTISLAPAPSEKSKKKTNNCC 219
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 160/195 (82%), Gaps = 1/195 (0%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K FA + +L F E SAL + NV+ +F ++L IY+++SK ++ S+
Sbjct: 131 DLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDT-SD 189
Query: 189 GTASTLPSKGETINV 203
G + PS G TI++
Sbjct: 190 GANANKPSGGPTISL 204
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 166/220 (75%), Gaps = 17/220 (7%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++ DY+FK+VLIGDS VGKS +L+RF++NEF+L+SKSTIGVEF TR+L ID+K VKAQI
Sbjct: 11 NQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++L+GN
Sbjct: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGN 130
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR---AV 183
K+DL + V TED K FAE+E L+F+ETSAL ATNVE +F VLT+IY I++K+ A
Sbjct: 131 KSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKNLAAD 190
Query: 184 EAGSNGTASTL-------PSKGETINVKDDSSVLKRIGCC 216
E+ NG +++L P G+ + K SS+ CC
Sbjct: 191 ESQGNGNSASLLGQKIVIPGPGQEVPAK--SSM-----CC 223
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 172/215 (80%), Gaps = 6/215 (2%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKA 64
++ YDYLFK+VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+++ +NK++KA
Sbjct: 4 KEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+N+ +WL+ELR++ D NI+++L+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL ++ + FA++E L F+ETSAL+ATNVE AF ++L +IY + K+ +
Sbjct: 124 GNKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK--Q 181
Query: 185 AGSNGTASTLPSKGETINVKDDSSVL---KRIGCC 216
N + ++ +G+ INV DD+ K+ CC
Sbjct: 182 GTKNEDSMSIQPRGKKINVDDDNDENNSKKKSKCC 216
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 165/216 (76%), Gaps = 9/216 (4%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YD LFK+VLIGDSGVGKSNLLSRFTKNEFN++SKSTIGVEFATR+L ID K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG-- 186
DL HL AV TE+ K FA++ L F ETSAL++ NV+ AF E++ IY+ VSK ++ G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -SNGTA--STLPSKGETINVKDDSSVLKRI---GCC 216
+NG A ++ P+ G TI++ + K+ CC
Sbjct: 189 SANGNANGASAPN-GPTISLTPTPNENKKANGNNCC 223
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 161/216 (74%), Gaps = 15/216 (6%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF ++EF+++SK+TIGVEF TR+L I+ K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL ELR H D NI+++LIGNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEAGSN 188
AV TED K FAE+E L+F+ETSAL+ATNVEN+F ++TQIY V+K+ A E SN
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECDSN 194
Query: 189 GTAS------TLPSKGETINVKDDSSVLKRIGCCSN 218
S +P G+ I K + CC++
Sbjct: 195 NPGSLAGKKILIPGSGQEIPAKTST-------CCTS 223
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 159/218 (72%), Gaps = 17/218 (7%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VL+GDSGVGKSNLLSRFT+N F+LE+KSTIGVEFATRS+ I+ K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTD-PNIIVMLIG 125
WDTAGQERYRAIT AYYRGA+G L+VYD+ +H TFQN+ +WL+ELR H D NI +ML+G
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS------ 179
NKTDLRHL AV T++ +A++ + F+ETSALD+TNVE A +LT IYK VS
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVSTKYGVD 185
Query: 180 KRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ V G GT T NV V K+ CC+
Sbjct: 186 SKPVPYGGLGTIMT--------NVPSTEDVKKK--CCN 213
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/214 (60%), Positives = 163/214 (76%), Gaps = 7/214 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS LL+ F +NEFNL+SK+TIGVEF TR+L ID + VKAQ
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQTR 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---- 183
+DL L V TED K FAE+E+L+FMETSAL++TN+ENAF VLT+IY+IVSK+ +
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVSKKNLVANE 192
Query: 184 EAGSNGTASTLPSKGETINVK-DDSSVLKRIGCC 216
E S+G +S L KG I V + + + CC
Sbjct: 193 EVDSSGNSSLL--KGTKIVVPGQEPAPPTKASCC 224
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 168/216 (77%), Gaps = 6/216 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQI
Sbjct: 11 NQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQI 70
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF ++ RWL ELR H D NI+++LIGN
Sbjct: 71 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGN 130
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL AV TED K FAE+E L+F+ETSAL++TNVENAF VLT+I+ I++++ + AG
Sbjct: 131 KSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKNLAAG 190
Query: 187 ---SNGTASTLPSKGETINVKDDSSVL--KRIGCCS 217
NG +++L + G+ I + + + K CCS
Sbjct: 191 ENQGNGNSASL-AGGKKIIIPGPAQEIPAKSKMCCS 225
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 161/216 (74%), Gaps = 15/216 (6%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF ++EF+++SK+TIGVEF TR+L I+ K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL ELR H D NI+++LIGNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEAGSN 188
AV TED K FAE+E L+F+ETSAL+ATNVEN+F ++TQIY V+K+ A E SN
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 189 GTAS------TLPSKGETINVKDDSSVLKRIGCCSN 218
S +P G+ I K + CC++
Sbjct: 195 NPGSLAGKKILIPGSGQEIPAKTST-------CCTS 223
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 164/215 (76%), Gaps = 8/215 (3%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE---A 185
DL HL AV T++ K FA + + F ETSAL++ NV+ AF E++ I+++VSK V+ +
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 186 GSNGTASTLPSKGETINV----KDDSSVLKRIGCC 216
G+N S KG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKEDKKK-KSSNCC 222
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/197 (61%), Positives = 160/197 (81%), Gaps = 5/197 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA--G 186
DL HL AV T++ K FA + +L F E SAL + NV+ +F ++L IY+++SK ++ G
Sbjct: 131 DLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEG 190
Query: 187 SNGTASTLPSKGETINV 203
SNG PS G TI++
Sbjct: 191 SNGNK---PSGGPTISL 204
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 166/221 (75%), Gaps = 16/221 (7%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF KN+F+++SK+TIGVEF T++L IDNK VKAQI
Sbjct: 95 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQI 154
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F N+ +WL ELR H D NI+VMLIGN
Sbjct: 155 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGN 214
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV TED + FA++E+L+FMETSAL++TNVE AF +LT+IY+++SK+ + A
Sbjct: 215 KCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 274
Query: 187 SN-----------GTASTLPSKGETINVKDDSSVLKRIGCC 216
+ GT +PS + IN + + GCC
Sbjct: 275 DDADPSGISGLLKGTKIIVPS--QEINAGEKKG---KGGCC 310
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 154/196 (78%), Gaps = 1/196 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SKSTIGVEF TR+L ID+K VKAQI
Sbjct: 12 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 71
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++LIGN
Sbjct: 72 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGN 131
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL V TED K FAE+E L+F+ETSAL+ATNVE AF VLT+IY IV+K+ + A
Sbjct: 132 KCDLESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 191
Query: 187 SN-GTASTLPSKGETI 201
N G ++ G+ I
Sbjct: 192 ENQGNGNSASLSGQKI 207
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 161/215 (74%), Gaps = 3/215 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SKSTIGVEF TR+L ID+K VKAQI
Sbjct: 14 NQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 73
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++L GN
Sbjct: 74 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGN 133
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL + V T D K FAE+E L+F+ETSAL+ATNVE AF VLT+IY IV+K+ + A
Sbjct: 134 KCDLENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTAD 193
Query: 187 SN-GTASTLPSKGETINVKDDSSVL--KRIGCCSN 218
N G ++ G+ I V + + KR CC +
Sbjct: 194 ENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQS 228
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 167/213 (78%), Gaps = 7/213 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF +NEF+++SK+TIGVEF T++L IDNK VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER A+TSAYYRGAVGA+LVYD+T+ +F ++ +WL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGN 126
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA- 185
K DL L AV TED + FA++E+L+FMETSAL+ATNVE AF +LT+IY+I+SK+++ A
Sbjct: 127 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTAD 186
Query: 186 --GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
++G +S L KG I + + KR GCC
Sbjct: 187 DDDADGNSSLL--KGTRIIIPSEQESGKRGGCC 217
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K +KAQI
Sbjct: 11 NQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSIKAQI 70
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI+++LIGN
Sbjct: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIGN 130
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL + V TED K FAE+E L+F+ETSAL+ATNVE AF VLT+I+ I++K+ + A
Sbjct: 131 KSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIINKKNLAAS 190
Query: 187 SN-GTASTLPSKGETINVKDDSS-VLKRIGCC 216
N G ++ G+ I V + + KR CC
Sbjct: 191 DNQGNDNSASLSGKKIIVPGPAQEIPKRSMCC 222
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ + FA + +L F E SAL + NV+ +F ++L IY+++SK ++
Sbjct: 131 DLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 189 GTASTLPSKGETINV----KDDSSVLKRIGCC 216
G PS G TI++ K+ S CC
Sbjct: 191 GGLKA-PSNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/186 (62%), Positives = 154/186 (82%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF KN+F+++SK+TIGVEF T++L IDNK VKAQI
Sbjct: 10 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F N+ +WL ELR H D NI+VMLIGN
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGN 129
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV TED + FA++E+L+FMETSAL++TNVE AF +LT+IY+++SK+ + A
Sbjct: 130 KCDLGTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTAN 189
Query: 187 SNGTAS 192
+ S
Sbjct: 190 DDADPS 195
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 164/216 (75%), Gaps = 9/216 (4%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YD LFK+VLIGDSGVGKSNLLSRFTKNEFN++SKSTIGVEFATR+L ID K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG-- 186
DL HL AV TE+ K FA++ L F ETSAL++ NV+ AF E++ IY+ VSK ++ G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -SNGTA--STLPSKGETINVKDDSSVLKRI---GCC 216
+NG A ++ P+ G TI++ + K+ CC
Sbjct: 189 SANGNANGASAPN-GPTISLTPTPNENKKANGNNCC 223
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 164/215 (76%), Gaps = 8/215 (3%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE---A 185
DL HL AV T++ + FA + + F ETSAL++ NV+ AF E++ I+++VSK V+ +
Sbjct: 129 DLAHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLNGS 188
Query: 186 GSNGTASTLPSKGETINV----KDDSSVLKRIGCC 216
GSN S KG TI++ K+D K CC
Sbjct: 189 GSNNVGSNGGPKGPTISLTPAPKEDKK-KKSSNCC 222
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 159/202 (78%), Gaps = 4/202 (1%)
Query: 17 VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYR 76
VL S + KSNLLSRFT+NEF+LESKSTIGVEFATRS++ + K++KAQIWDTAGQERYR
Sbjct: 22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYR 81
Query: 77 AITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAV 136
AITSAYYRGAVGALLVYD+T+ +F NV RWL+EL++H D NI++ML+GNK+DL+HL AV
Sbjct: 82 AITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAV 141
Query: 137 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPS 196
+T+D AFAE L F+ETSALD +NVE AF +L++IY++ SK+A+E GS T++ P+
Sbjct: 142 TTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGS--TSNFAPN 199
Query: 197 KGET--INVKDDSSVLKRIGCC 216
+T IN D ++ CC
Sbjct: 200 ATQTIVINPPADEGKTEKAKCC 221
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 164/210 (78%), Gaps = 6/210 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE Y++++K+VLIG+SGVGKSNLLSRFTKNEFN +S++TIGVEF+TR++++D +KAQI
Sbjct: 4 DESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+++H T+++ RWL+EL EH DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L V +E+ +AFAE + + FMETSALD+TNVE AF EVL+ I K V+ + V G
Sbjct: 124 KRDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAIQKKVASQQVTRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
S +A TL S + ++ ++ GCC
Sbjct: 184 SI-SAVTLSSPIGATDTQE-----RKGGCC 207
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 162/212 (76%), Gaps = 6/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D Y+++FK+VLIG+SGVGKSNLLSRFTKNEFN +S++TIGVEF+TRS+++D+ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H T+++V RWL+EL +H DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL + V TE+ K FA+ L FMETSAL++TNVE+AF EVLT I++ V+ + V G
Sbjct: 124 KNDLATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
S + + G + ++ GCC N
Sbjct: 184 SISAVTLGQTHGPSREFQESR------GCCKN 209
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 124/197 (62%), Positives = 157/197 (79%), Gaps = 2/197 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ +T++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K FA + L F ETSAL++ NV+ AF E++T IY++VSK V+ G +
Sbjct: 129 DLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 189 GT--ASTLPSKGETINV 203
G + KG TI++
Sbjct: 189 GNNDINNGTPKGPTISL 205
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 162/212 (76%), Gaps = 6/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D Y+++FK+VLIG+SGVGKSNLLSRFTKNEFN +S++TIGVEF+TRS+++D+ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H T+++V RWL+EL +H DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL + V TE+ K FA+ L FMETSAL++TNVE+AF EVLT I++ V+ + V G
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
S + + G + ++ GCC N
Sbjct: 184 SISAVTLGQTHGPSREFQESR------GCCKN 209
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 162/212 (76%), Gaps = 4/212 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L ID+K VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++LIGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG- 186
+DL AV TED FA++E L+F+ETSAL ATNVE+AF +LT+I+ IV+K+ + AG
Sbjct: 132 SDLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKNLIAGE 191
Query: 187 --SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
SNG ++L K + I + + CC
Sbjct: 192 NQSNGNPASLSGK-KIIIPGPAQEIPSKSKCC 222
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 161/215 (74%), Gaps = 3/215 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++ DY+FK+VLIGDS VGKS +L+RF+ NEF+L+SKSTIGVEF TR+L ID+K VKAQI
Sbjct: 11 NQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++L+GN
Sbjct: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGN 130
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR---AV 183
K+DL + V TED K FAE+E L+F+ETSAL ATNVE +F VLT+IY IV+K+ A
Sbjct: 131 KSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKNLAAD 190
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
E+ NG +++L + I K CC +
Sbjct: 191 ESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCCQS 225
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 155/211 (73%), Gaps = 2/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D + LFK+VLIGDSGVGK+NL SRFT EFNLESKSTIGV+FAT+++ ID KVVKAQI
Sbjct: 5 DPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ TF N+ RWL ELRE+ ++++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL+HL V TED K FAEQ+ + FMETSAL+A NVE AF + L IY +VSKR
Sbjct: 125 KCDLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKRPSFNA 184
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
G + +P+ + + K+ CC+
Sbjct: 185 DEG--NIIPTNNLPVEEPNLKETTKKKFCCT 213
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 161/210 (76%), Gaps = 3/210 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ SKSTIGVEFATR++ ++ K VKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K +A++ + F ETSAL+A NV+ AF E++T IY++VSK V+
Sbjct: 129 DLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSEK 188
Query: 189 GTASTLPSKGETINVKDDSS--VLKRIGCC 216
T+P +G TI++ S+ K CC
Sbjct: 189 SGGGTMP-RGPTISLTPASNEKTKKSNNCC 217
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/229 (54%), Positives = 168/229 (73%), Gaps = 19/229 (8%)
Query: 2 AGY-KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
GY P ++ DY+FK+VLIGDS VGKS +L+R+ ++EF+L+SK+TIGVEF TR+L ID+K
Sbjct: 5 GGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHK 64
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TR TF ++ RWL ELR H D NI+
Sbjct: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIV 124
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
++LIGNK+DL A+ TED + FAE+E L+F+ETSA +ATNVE+AF+ VL++I+ IV+K
Sbjct: 125 IILIGNKSDLVDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNK 184
Query: 181 RAVEAG---SNGTASTL--------PSKGETINVKDDSSVLKRIGCCSN 218
+++ A NG +L P G+ I K + CC++
Sbjct: 185 KSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNM-------CCNS 226
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 164/215 (76%), Gaps = 8/215 (3%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE---A 185
DL HL AV T++ K FA + + F +TSAL++ NV+ AF E++ I+++VSK V+ +
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 186 GSNGTASTLPSKGETINV----KDDSSVLKRIGCC 216
G+N S KG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKEDKKK-KSSNCC 222
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 149/182 (81%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YD LFK+VLIGDSGVGKSNLLSRFTKNEFN++SKSTIGVEFATR+L ID K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K FA++ L F ETSAL++ NV+ AF E++ IY+ VSK ++ G +
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQMDLGDS 188
Query: 189 GT 190
T
Sbjct: 189 ST 190
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 159/213 (74%), Gaps = 1/213 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV-EA 185
K+DLRHL AV T++ +AFA +T + A + F+ T+IY+IVS++ + E
Sbjct: 125 KSDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQIAER 184
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+N + ++ D ++ CC N
Sbjct: 185 SANDESPGNNVVDISVPPTTDGQRGSKLQCCQN 217
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/182 (65%), Positives = 149/182 (81%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YD LFK+VLIGDSGVGKSNLLSRFTKNEFN++SKSTIGVEFATR+L ID K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K FA++ L F ETSAL++ NV+ AF E++ IY+ VSK ++ G +
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 189 GT 190
T
Sbjct: 189 ST 190
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 163/222 (73%), Gaps = 17/222 (7%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++ DY+FK+VLIGDS VGKS +L+RF++NEF+L+SKSTIGVEF TR+L ID+K VKAQI
Sbjct: 11 NQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQI 70
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++L+GN
Sbjct: 71 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVGN 130
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR---AV 183
K+DL + V TED K FAE+E L+F+ETSAL ATNVE +F VLT+IY V+K+ A
Sbjct: 131 KSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKNLAAD 190
Query: 184 EAGSNGTASTL-------PSKGETINVKDDSSVLKRIGCCSN 218
E+ NG +++L P + I K + CC +
Sbjct: 191 ESQGNGNSASLLGQKIIIPGPAQEIPAKSNM-------CCQS 225
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 128/216 (59%), Positives = 165/216 (76%), Gaps = 9/216 (4%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YD LFK+VLIGDSGVGKSNLLSRFTKNEFN++SKSTIGVEFATR+L I+ K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG-- 186
DL HL AV TE+ K FA++ L F ETSAL++ NV+ AF E++ IY+ VSK ++ G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -SNGTA--STLPSKGETINVKDDSSVLKRI---GCC 216
+NG A ++ P+ G TI++ + K+ CC
Sbjct: 189 SANGNANGASAPN-GPTISLTPTPNENKKANGNNCC 223
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 162/212 (76%), Gaps = 6/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D Y+++FK+VLIG+SGVGKSNLLSRFTKNEFN +S++TIGVEF+TRS+++D+ +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H T+++V RWL+EL +H DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL + V TE+ K FA+ L FMETSAL++TNVE+AF EVLT I++ V+ + V G
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
S + + G + ++ S CC N
Sbjct: 184 SISAVTLGQTHGPSREFQESRS------CCKN 209
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 148/176 (84%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN+ESKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ +T++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
DL HL AV T++ K FA++ L F ETSAL++ NV+ AF E++T IY++VSK V+
Sbjct: 129 DLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVD 184
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/199 (62%), Positives = 158/199 (79%), Gaps = 4/199 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YD LFK+VLIGDSGVGKSNLLSRFTKNEFN++SKSTIGVEFATR+L ID K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG-- 186
DL HL AV TE+ K FA + L F ETSAL++ NV+ AF E++ IY+ VSK ++ G
Sbjct: 129 DLAHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -SNGTASTLPS-KGETINV 203
+NG A+ + + G TI++
Sbjct: 189 AANGNANGMSALNGPTISL 207
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 162/211 (76%), Gaps = 5/211 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++++V RWL+EL+EH D NII+ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K FA + +L F E SAL + NV+ +F ++L IY+++SK +E +N
Sbjct: 131 DLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLE--NN 188
Query: 189 GTASTLPSKGETINVKDDSSVLKRI---GCC 216
+ T + G TI++ K GCC
Sbjct: 189 DSKQTNTAGGPTISLTPAPQEKKNKNNGGCC 219
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 162/213 (76%), Gaps = 2/213 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGK+ +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 69
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI++ML GNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNK 129
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
TDL AV TED K FA++E L+F+ETSA++AT +E+AF VLT+I+ IV+K+ + A
Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADE 189
Query: 188 NGTASTLPS-KGETINVKDDSSVLK-RIGCCSN 218
N + S S G+ I V V+ + CCS+
Sbjct: 190 NQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 126/200 (63%), Positives = 155/200 (77%), Gaps = 9/200 (4%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFN++SKSTIGVEFATR++ +D K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE---- 184
DL HL AV TE+ K FA + L F ETSAL++ NV+ AF E++T I++ VSK VE
Sbjct: 129 DLAHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKHQVELSNA 188
Query: 185 ----AGSNG-TASTLPSKGE 199
AG NG T S P+ E
Sbjct: 189 NKPGAGPNGPTISLTPAPNE 208
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/152 (74%), Positives = 137/152 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSAL 158
K+DLRHL AV T++ +AFAE+ +L F+ +L
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIRDLSL 156
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 152/173 (87%), Gaps = 1/173 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKAQIWD 68
YDYLFK+VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+++ +NK++KAQIWD
Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ +F+N+ +WL+ELR++ D NI+++L+GNK+
Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 123
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
DL+HL ++ D +A++E L F+ETSAL+ATNVE AF ++L +IY + K+
Sbjct: 124 DLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 176
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 8/215 (3%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE---A 185
DL HL AV T++ K FA + + F TSAL++ NV+ AF E++ I+++VSK V+ +
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 186 GSNGTASTLPSKGETINV----KDDSSVLKRIGCC 216
G+N S KG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKEDKKK-KSSNCC 222
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 159/211 (75%), Gaps = 3/211 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ + FA + +L F E SAL + NV+ +F ++L IY+++SK ++
Sbjct: 131 DLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 189 G---TASTLPSKGETINVKDDSSVLKRIGCC 216
G AS P+ T K+ S CC
Sbjct: 191 GGLKAASNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 166/212 (78%), Gaps = 5/212 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K +++YDYLFK+VL GDSGVGKSNLL RFTKN+FN +SK+TIGVEFATRS+ I K++KA
Sbjct: 3 KAEDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GA+LVYD+T +F++V RW++E+RE+ D +I++M+I
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMII 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL A+ TE G+ A+ + FME SA D TNV+ AFT+++ QIY+ ++K+ +
Sbjct: 123 GNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLTKQLQK 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
S L +GE ++++ +S K+ GCC
Sbjct: 183 YDQ---MSHL--QGEKLDLEITTSGNKKQGCC 209
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 158/195 (81%), Gaps = 3/195 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID + VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K+FA + SL F E SAL + NV+ +F ++L IY+++SK ++
Sbjct: 131 DLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQ 190
Query: 189 GTASTLPSKGETINV 203
G PS G TI++
Sbjct: 191 GAQK--PS-GPTISL 202
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++L+GNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVIILVGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL V TED K FA++E L+F+ETSAL++TNVE AF VLT+I+ IV+K+ +
Sbjct: 132 CDLESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKTLAGAD 191
Query: 188 NGTASTLPS-KGETINVKDDSSVL-KRIGCCSN 218
N T S G+ I V + V+ ++ CCS+
Sbjct: 192 NQTNGNPASLGGKKIVVPGPAQVIPEKSKCCSS 224
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 165/210 (78%), Gaps = 5/210 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++ Y+++FK+VLIG+SGVGKSNLLSRFTKNEF +S++TIGVEF+TR+++++N ++KAQI
Sbjct: 4 EDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+++H T+++ RWL+EL +H DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL+ V TE+ + FA+++ L FMETSALD+TNVE+AF EVLT I+K V+ R V G
Sbjct: 124 KSDLQSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIHKKVASREVTRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
S + G +N + +R GCC
Sbjct: 184 SISAVTLSGPIG--LNSEQQE---ERKGCC 208
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 162/212 (76%), Gaps = 4/212 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K FA++ +L F+E SAL + NV+ +F ++L IY+++SK ++
Sbjct: 131 DLDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 189 GTAS-TLPSKGETINVKDDSSVLKRI---GCC 216
G + + G TI++ K GCC
Sbjct: 191 GGVNKPTTAGGPTISLTPAPQSKKNKNNGGCC 222
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 163/210 (77%), Gaps = 3/210 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE--AG 186
DL HL AV T++ K FA + +L F E SAL + NV+ +F ++L IY+++SK +E A
Sbjct: 131 DLDHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNAD 190
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
SN +++ P+ T K+ +S CC
Sbjct: 191 SNKQSTSGPTISLTPAPKEKNSK-SNSNCC 219
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/219 (55%), Positives = 160/219 (73%), Gaps = 18/219 (8%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF ++EF+++SK+TIGVEF TR+L I+ K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL ELR H D NI+++LIGNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN-- 188
AV TED K FAE+E L+F+ETSAL+ATNVEN+F ++T+IY V+K+ + + N
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVENQG 194
Query: 189 ---------GTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G +P G+ I K + CCS+
Sbjct: 195 DSNNPGSLAGKKIVIPGSGQDIPAKTST-------CCSS 226
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 147/174 (84%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQIW
Sbjct: 12 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 71
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI+++LIGNK
Sbjct: 72 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNK 131
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
TDL AV TED K FAE+E L+F+ETSAL+ATNVENAF VLT+I+ IV+K+
Sbjct: 132 TDLEEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKK 185
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 158/195 (81%), Gaps = 2/195 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++++V RWL+EL+EH D NII+ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K FA + +L F E SAL + NV+ +F ++L IY+++SK +E +N
Sbjct: 131 DLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLE--NN 188
Query: 189 GTASTLPSKGETINV 203
+ T + G TI++
Sbjct: 189 DSKQTNTAGGPTISL 203
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 159/201 (79%), Gaps = 2/201 (0%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+TKNEFNLESKSTIGVEFAT+S++ DNK +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RA+TSA YRGAVGALLVYD+++H T++NV +WL+ELR+ DP+I++ML+GNK+DLRHL
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V TE+ K+FA++ +L F+ETSA +TNVE+AF +L +IYK V + +G + + S+ P
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDD-SKSSKP 179
Query: 196 SKGE-TINVKDDSSVLKRIGC 215
GE +NV + + C
Sbjct: 180 EGGEIVVNVDEGGGDKSKCPC 200
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 118/167 (70%), Positives = 143/167 (85%), Gaps = 5/167 (2%)
Query: 54 SLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELRE 113
S+ +D+KVVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TF+NV RW+REL++
Sbjct: 1 SIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKD 60
Query: 114 HTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQ 173
HTD NI++ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVLTQ
Sbjct: 61 HTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQ 120
Query: 174 IYKIVSKRAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
IY +VSK+A++ G + A P KG+TINV KDD S +K+ CCS+
Sbjct: 121 IYHVVSKKALDIGDDPAA---PPKGQTINVGGKDDVSAVKKSACCSS 164
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 154/216 (71%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M E +YLFK+V+IGDS VGKSNLLSR+ +NEF+L SK+TIGVEF T+S+ ID K
Sbjct: 1 MGDESDGEAEEYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQER+RA+TSAYYRGA GALLVYD++R +TF NVGRWL+EL H+D +
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
ML+GNK DL ++ V E+GKA AE E L+FMETSALDATNV AF V+ +IY VS+
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ + + S +L + KDD R GCC
Sbjct: 181 KILNSDSYKAELSLNRVSIDGDSKDDKKQTSRFGCC 216
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 153/214 (71%), Gaps = 5/214 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K ++EYD+LFK+VLIGDSGVGK+NLLSRFTKNEFN++SK TIGVEFAT+++ +NK +KA
Sbjct: 4 KNEDEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQE+YRAIT+AYYRGAVGAL +YD+T+ TF NV +WL ELRE+ D NII MLI
Sbjct: 64 QIWDTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DL+ + V TED FAE+ +L FMETSA A NV+ AF +++T+IY + R E
Sbjct: 124 GNKCDLQEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKTRPNE 183
Query: 185 AGSNGTASTLPSKGETI--NVKDDSSVLKRIGCC 216
G I + K + K CC
Sbjct: 184 EKKKAQPQ---QNGNNIIKDFKQPTQAEKEKKCC 214
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 117/160 (73%), Positives = 141/160 (88%)
Query: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 72
L +VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++DNK VKAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRH 132
ERYRAITSAYYRGAVGALLVYD+ ++ T++N RWL EL++H D NII+ML+GNK+DLRH
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRH 136
Query: 133 LVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
L AV T++ ++FAE+ L F+ETSALD+TNVE AF +L+
Sbjct: 137 LRAVPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNILS 176
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 153/190 (80%), Gaps = 2/190 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + T+++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ + FA + +L F E SAL + NV+ +F ++L IY+++SK ++
Sbjct: 131 DLDHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDG 190
Query: 189 GTASTLPSKG 198
G S P+ G
Sbjct: 191 G--SNKPTTG 198
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 154/186 (82%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF++N+FN++SK+TIGVEF T++L ID+K VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ +WL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV TED + FA++E+L+FMETSAL++TNVE AF +LT+IY+++ K+ + A
Sbjct: 129 KCDLATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKKTLTAN 188
Query: 187 SNGTAS 192
+ S
Sbjct: 189 DDTDPS 194
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Query: 17 VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS++ K +KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAV 136
AITSAYYRGAVGALLVYD+++H+T++NV +WL ELR+H+D +I+VMLIGNK DLRHL V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 137 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI-YKIVSKRAVEAGSNGTAS 192
T++ + FA +E L+F ETSALDATNV+ AF +VL + + +K A SN T S
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVLKDAGHNVATKFTSTATSNVTTS 177
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 163/229 (71%), Gaps = 19/229 (8%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y D++ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ L VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 KRAVEAG----------SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
++ + + SNG +PS G+ K+ GCCS+
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVIPSDGQ--------GEFKKGGCCSS 221
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 165/211 (78%), Gaps = 6/211 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKAQIWD 68
+ + + +VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+++ N K++KAQIWD
Sbjct: 1 FSFFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWD 60
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ +WL+ELR++ D NI+++L+GNK+
Sbjct: 61 TAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKS 120
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL+HL ++ D FA++E L F+ETSAL+ATNVE AF ++L +IY + K+ +A +
Sbjct: 121 DLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK--QATKS 178
Query: 189 GTASTLPSKGETINVKDDSSVLK---RIGCC 216
+ +G+ INV +D+ + + CC
Sbjct: 179 EDNVNIQPRGKKINVDNDNDEDEKKTKTKCC 209
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 160/218 (73%), Gaps = 7/218 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE DY+FK+V+ GDSGVGKS LL+RF KNEF+++SK TIGVEF TR++ +D+K+VKAQI
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERY+AIT+AYYRGA GALL YD+T+ TF +V +WL ELR H D NI+VML+GN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL L AV TE + FA+QE L+F+ETSALD++NVE+AF +L+Q+Y+ VS++ +
Sbjct: 129 KSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHILVD 188
Query: 187 ---SNGTASTLPSKGETINVKDD----SSVLKRIGCCS 217
SN L +G I V + KR CCS
Sbjct: 189 GHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 160/221 (72%), Gaps = 6/221 (2%)
Query: 4 YKPDEEY--DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
Y DEE DYLFK+VL+GDS VGKSNLL+RF +NEF SKSTIGVEF T+ L ID K
Sbjct: 3 YGGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKE 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD+TR TF +VGRWL EL H+D N++
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNVVT 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
+LIGNKTDL+H VST +GKA AE + L+FMETSALD++NV+ AF V+ +IY I+S++
Sbjct: 123 ILIGNKTDLKHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILSRK 182
Query: 182 AVEAGSNGTASTLP-SKGETINVKDDSSVLKRIG---CCSN 218
+ + S G+ + ++ D+ G CCS+
Sbjct: 183 VFQCQEQKRSDLQSLSNGKAVVLQTDAPKEANSGRGWCCSS 223
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 159/210 (75%), Gaps = 2/210 (0%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YLFK+VLIGDS VGK+NLLSRFT++EFN +S++TIGVEFATR+L I+ K +KAQIWD
Sbjct: 11 DYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRIKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAIT+AYYRGAVGAL+VYD++ ++++V RWL+E++EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIALVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ + FA + +L F E SAL+A NVE F +++ IY +VSKR + N
Sbjct: 131 DLEHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRKFDMDEN 190
Query: 189 GTAST-LPSKGETIN-VKDDSSVLKRIGCC 216
G A+ L SK T+ D V K CC
Sbjct: 191 GVANKDLNSKTITLTPAPKDKKVSKNSNCC 220
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/218 (57%), Positives = 159/218 (72%), Gaps = 11/218 (5%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI--DNKVV 62
K ++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF ESKSTIGVEFATR + + + K V
Sbjct: 3 KDHDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTV 62
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ ++ NV +WL+ELR+H D NI++
Sbjct: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVIT 122
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNKTDL+HL +V E F+ E L F+ETSA ++TNV+ AF + LT +Y I+SK++
Sbjct: 123 LVGNKTDLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKKS 182
Query: 183 VEAG----SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ NG A + K + + K + S CC
Sbjct: 183 CSSAEVDDKNGGAGIIEVKAISESSKKNPS-----KCC 215
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/176 (65%), Positives = 147/176 (83%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT NEFNLESKSTIGVEFATR++ ++ K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELR + D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
DL H+ AV T++ K FA++ L F ETSAL ++NV+ AF E++T IY++VSK V+
Sbjct: 129 DLDHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMVSKHQVD 184
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/156 (73%), Positives = 139/156 (89%)
Query: 17 VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++DNK VKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAV 136
AITSAYYRGAVGALLVYD+ ++ T++N RWL EL++H D NI++ML+GNK+DLRHL AV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 137 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
T++ ++FAE+ L F+ETSALD+TNVE AF +L+
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNILS 156
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 154/216 (71%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M E +YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ I+ K
Sbjct: 1 MGDESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQER+RA+TSAYYRGA GALLVYD++R +TF NVGRWL+EL H+D +
Sbjct: 61 DVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
ML+GNK DL ++ V E+GKA AE E L+FMETSALD+TNV AF V+ +IY VS+
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ + + S +L + KDD R GCC
Sbjct: 181 KILNSDSYKAELSLNRVSIEGDSKDDQKQSNRFGCC 216
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 164/229 (71%), Gaps = 19/229 (8%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y D++ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ L VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 KRAVEAG----------SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
++ + + SNG +PS G+ + K+ GCCS+
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVIPSDGQGES--------KKGGCCSS 221
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/218 (56%), Positives = 158/218 (72%), Gaps = 3/218 (1%)
Query: 4 YKPDEEY--DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
Y DEE DYLFK+VL+GDS VGKSNLL+RF +NEF SKSTIGVEF T+ L ID K
Sbjct: 3 YDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKE 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF +VGRWL EL H+D N++
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVT 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
+L+GNKTDL+H VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S++
Sbjct: 123 ILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSRK 182
Query: 182 AVEAGSNGTASTLPSKGETINVKD-DSSVLKRIGCCSN 218
++ + S G+ + + D + CCS+
Sbjct: 183 VFQSQEQKRSEQSLSNGKPVMLSDSNEPTSGGRWCCSS 220
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 155/215 (72%), Gaps = 1/215 (0%)
Query: 3 GYKPD-EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
G +PD E +YLFK+V+IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+S+ I+ K
Sbjct: 2 GDEPDGEAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKE 61
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQER+RA+TSAYYRGA GALLVYD+TR +TF NVGRWL+EL H+D +
Sbjct: 62 VKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAK 121
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK DL + V E+GKA AE E L+FMETSALDATNV AF V+ +IY VS++
Sbjct: 122 MLVGNKCDLGDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRK 181
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ + S +L + KD+ R GCC
Sbjct: 182 VLNSDSYKAELSLNRVSIDGDSKDEQKQGSRFGCC 216
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 148/187 (79%), Gaps = 12/187 (6%)
Query: 1 MAGYKPD-------EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR 53
M+G +P ++YDYLFK+VL+GDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR
Sbjct: 1 MSGRRPATWEQQAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATR 60
Query: 54 SLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELRE 113
++++D K +KAQIWDTAGQERYRA+TSAYYRGAVGALLVYDVT+ ATF N RWLRELR+
Sbjct: 61 TIQVDGKTIKAQIWDTAGQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRD 120
Query: 114 HTDP-NIIVMLIGNKTDLRH----LVAVSTEDGKAFAEQESLYFMETSALDATNVENAFT 168
H D VML+GNKTDL L AV DG A AE+E L F+ETSALDATNV+ AF
Sbjct: 121 HADGRGTAVMLVGNKTDLAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFV 180
Query: 169 EVLTQIY 175
+LT+IY
Sbjct: 181 TLLTEIY 187
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 160/218 (73%), Gaps = 7/218 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE DY+FK+V+ GDSGVGKS LL+RF KNEF+++SK TIG+EF TR++ +D+K+VKAQI
Sbjct: 9 DEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERY+AIT+AYYRGA GALL YD+T+ TF +V +WL ELR H D NI+VML+GN
Sbjct: 69 WDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL L AV TE + FA+QE L+F+ETSALD++NVE+AF +L+Q+Y+ VS++ +
Sbjct: 129 KSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHILVD 188
Query: 187 ---SNGTASTLPSKGETINVKDD----SSVLKRIGCCS 217
SN L +G I V + KR CCS
Sbjct: 189 GHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 159/221 (71%), Gaps = 6/221 (2%)
Query: 4 YKPDEEY--DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
Y DE+ DYLFK+VL+GDS VGKSNLL+RF +NEF SKSTIGVEF T+ L ID K
Sbjct: 3 YGGDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGKE 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD+TR TF +VGRWL EL H+D N++
Sbjct: 63 IKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNVVT 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
+LIGNKTDL+H VS +GKA AE + L+FMETSALD++NV AF V+ +IY I+S++
Sbjct: 123 ILIGNKTDLKHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILSRK 182
Query: 182 AVEAGSNGTASTLP-SKGETINVKDDSSVLKRIG---CCSN 218
++ + S G+ + ++ D+ G CCS+
Sbjct: 183 VFQSQEQKKSELQSLSNGKAVVLQSDAPSATSSGGRWCCSS 223
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 159/211 (75%), Gaps = 5/211 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YLFK+VLIGDSGVGKSNLLSRFT+NEFNLES+STIGVEFATR++ ID K VKAQIWD
Sbjct: 10 DYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGALLVYD+++ +++NV +WL+EL+E+ D NI++ L+GNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVGNKS 129
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K F+ + L F E SAL+A NV+ +F ++L I+ +VSK +
Sbjct: 130 DLDHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFDM--T 187
Query: 189 GTASTLPSKGETINV---KDDSSVLKRIGCC 216
+ PS G TI++ + + CC
Sbjct: 188 DYSGPKPSGGPTISLTPTPGNEQSKNKSNCC 218
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 160/211 (75%), Gaps = 3/211 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGDSGVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGA+GAL+VYD+ + ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ + FA + +L F E SAL + NV+ +F ++L IY+++SK ++
Sbjct: 131 DLDHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 189 G---TASTLPSKGETINVKDDSSVLKRIGCC 216
G A+ P+ T K+ + GCC
Sbjct: 191 GGLKAATNGPTISLTPAPKERNRNKNNGGCC 221
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 156/194 (80%), Gaps = 7/194 (3%)
Query: 29 LLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKAQIWDTAGQERYRAITSAYYRGAV 87
+LSRFT++EFNLESKSTIGVEFAT+S+ +D KV+KAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 88 GALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQ 147
GALLVYD+T+ +F+NV RWL+ELR+H DPNI+++L+GNK+DL+HL AVS E+ FA +
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 148 ESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINV---K 204
E L F+ETSALDATNVE AF ++L +IY + K+ +E N ++T P +G+ I++ +
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIE--DNPQSTTQPGRGQKIHLDEER 178
Query: 205 DDSSVLK-RIGCCS 217
DS + + R GCCS
Sbjct: 179 TDSQIRQSRRGCCS 192
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 162/212 (76%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF +NEF+L+SK+TIGVEF T++L IDNK++KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKIIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ +WL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L AV ED + A++E+L+FMETSAL++TNVE F +LT+IY+I +K+++
Sbjct: 129 KCDLGSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTTS 188
Query: 187 SNGTASTLPSKGETINVKDDS--SVLKRIGCC 216
+ + KG I V + + K+ GCC
Sbjct: 189 DDDIGGSGLLKGSRIIVPNQEIYNGGKKGGCC 220
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 152/181 (83%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE Y+++FK+VLIG+SGVGKSNLLSRFTKNEFN +S++TIGVEF+TR++++ + ++KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H T+++V RWL+EL +H DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
KTDL +V E+ K FAE+ L F+ETSAL++TNVE AF VL +I++ VS + V G
Sbjct: 124 KTDLGSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSKKVLRG 183
Query: 187 S 187
S
Sbjct: 184 S 184
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 147/167 (88%), Gaps = 1/167 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKA 64
++ YDYLFK+VLIGDSGVGKSNLLSRFT++EFNLESKSTIGVEFAT+S+++ N K++KA
Sbjct: 4 KEDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+N+ +WL+ELR++ D NI+++L+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVL 171
GNK+DL+HL ++ D FA++E L F+ETSAL+ATNVE AF ++L
Sbjct: 124 GNKSDLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 164/217 (75%), Gaps = 14/217 (6%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K +E Y+++FK+VLIG+SGVGKSNLLSRF KNEFN +S++TIGVEF+TR+++++ +KA
Sbjct: 6 KSNEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLTIKA 65
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAG ERYRAITSAYYRGAVGALLVYDVT+H T+++V RWL+EL +H DP+++VML+
Sbjct: 66 QIWDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHMVVMLV 125
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL +V TE+ K FAE++ L F+ETSAL++TNVE AF +VL++I++ VS + V
Sbjct: 126 GNKSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVSSKKVI 185
Query: 185 AGSNGTAST---LPSKGETINVKDDSSVLKRIGCCSN 218
GS S +PS E + CC N
Sbjct: 186 QGSISAVSLAGHVPSNPE-----------ENKPCCKN 211
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 161/211 (76%), Gaps = 2/211 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGK+ LL+RF +NEF+L+SK+TIGVEF T++L IDNK +KAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTIKAQIW 69
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ RWL ELR H D NI++MLIGNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIMLIGNK 129
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL L AV ED + A++E+L+FMETSAL++TNVE F +LT+IY+I +K+++ A
Sbjct: 130 CDLGSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTASD 189
Query: 188 NGTASTLPSKGETINVKDD--SSVLKRIGCC 216
+ + KG I V + + K+ GCC
Sbjct: 190 DDNWGSGLLKGSRIIVPNQEIDNGGKKGGCC 220
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 152/210 (72%), Gaps = 1/210 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E +YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ ID K VKAQIW
Sbjct: 10 EAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIW 69
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RA+TSAYYRGA GALLVYD++R TF NVGRWL+EL H+D + ML+GNK
Sbjct: 70 DTAGQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVGNK 129
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL ++ V E+GKA AE E L+FMETSALD+TNV AF V+ +IY VS++ + + S
Sbjct: 130 CDLDNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKILNSDS 189
Query: 188 NGTASTLPSKG-ETINVKDDSSVLKRIGCC 216
+L + + KD R GCC
Sbjct: 190 YKAELSLNRVSIDDSDSKDGQKQTSRFGCC 219
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 155/195 (79%), Gaps = 3/195 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YL+K+VLIGD GVGKSNLLSRFT++EFNLES+STIGVEFATR+L ID + VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++++V RWL+EL+EH D NI++ L+GNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNIVIELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV TE+ K FA + SL F E SAL + NV+ +F ++L IY+++SK ++
Sbjct: 131 DLDHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQ 190
Query: 189 GTASTLPSKGETINV 203
G PS G TI++
Sbjct: 191 GAQK--PS-GPTISL 202
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 161/212 (75%), Gaps = 6/212 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+Y+YLFK+VL+G+S VGKSNLLSRFT++EFN+ESK+TIGVEFATR++ +D K +KAQIWD
Sbjct: 11 DYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKRIKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRA+T+AYYRGAVGALLVYD++ ++++ RWL EL++H D NI+V L+GNK+
Sbjct: 71 TAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVVELVGNKS 130
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL HL AV T++ K+FA ++ L F E SAL++ NVE AF +++ IY +VSK +
Sbjct: 131 DLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMVSKHQFDMNDY 190
Query: 189 GTASTLPSKGETINV----KDDSSVLKRIGCC 216
G + + G+TI + KD S +K+ CC
Sbjct: 191 GNDNKPITGGQTITLTPTPKD--SKIKKDSCC 220
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 160/223 (71%), Gaps = 22/223 (9%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+ K +KAQI
Sbjct: 8 DKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RA+TSAYYRGAVGALLVYD++R TFQ++GRWL EL H+D N++ +L+GN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVVTILVGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL+ + V T +GKA AE + L+FMETSALD++NV AF V+ +IY I+S++ + +
Sbjct: 128 KSDLKGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 187 ----------SNGTASTLPS--KGETINVKDDSSVLKRIGCCS 217
SNG +PS +GE+ K+ GCCS
Sbjct: 188 ELNKQDPASLSNGKKVVIPSEEQGES----------KKGGCCS 220
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 161/212 (75%), Gaps = 6/212 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE Y+++FK+VLIG+SGVGKSNLLSRFTKNEF+ +S++TIGVEF+TR+++++ +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+++H T+++ RWL+EL +H DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL + +V TED K FAE+ L F ETSAL++ NVE AF VLT+I+K V+ + V G
Sbjct: 124 KSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEVTRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
S +A TL +++ CC N
Sbjct: 184 SI-SAVTLSQPKTPAETQEEKKT-----CCKN 209
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/176 (64%), Positives = 147/176 (83%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
DL HL AV T++ K FA + + F ETSAL++ NV+ AF E++ I+++VSK V+
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMVSKHQVD 184
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/145 (77%), Positives = 133/145 (91%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLY 151
K+DLRHL AV T++ +AFAEQ L+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEQLVLH 149
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 155/207 (74%), Gaps = 3/207 (1%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLL+R+ +NEFN SK+TIGVEF T+S+ ID K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR +TF+NVGRWL EL H+D + MLIGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
+ AVS E+GK+ AE E L+FMETSALD+TNV+ AF V+ +IY +S++ + + S
Sbjct: 130 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKE 189
Query: 191 ASTLPSKGETINVKDDSSVLKRIGCCS 217
T+ VK+++ K CCS
Sbjct: 190 ELTV---NRVSLVKNENEGTKTFSCCS 213
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/216 (56%), Positives = 159/216 (73%), Gaps = 6/216 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+ DY+FK+V+IGDS VGK+ LLSRFTKNEF +SKSTIGVEF TR++ I KVVKAQIW
Sbjct: 15 EKIDYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIW 74
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ ATF +V RW+ ELR H D +I++ LIGNK
Sbjct: 75 DTAGQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNK 134
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL AV TED FAE + L+F ETSAL NV+ AF +L +IY ++SK+++E G
Sbjct: 135 ADLVDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSLECGG 194
Query: 188 NGT--ASTLPSKGETINVKDDS----SVLKRIGCCS 217
+ T A ++ +G I+V S S +K++ CS
Sbjct: 195 HKTNGADSVMLRGSKIDVISGSDLEISEMKKLSACS 230
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 155/207 (74%), Gaps = 3/207 (1%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLL+R+ +NEFN SK+TIGVEF T+S+ ID K VKAQIWDTA
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTA 68
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR +TF+NVGRWL EL H+D + MLIGNK DL
Sbjct: 69 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 128
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
+ AVS E+GK+ AE E L+FMETSALD+TNV+ AF V+ +IY +S++ + + S
Sbjct: 129 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKE 188
Query: 191 ASTLPSKGETINVKDDSSVLKRIGCCS 217
T+ VK+++ K CCS
Sbjct: 189 ELTV---NRVSLVKNENEGTKTFSCCS 212
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 164/210 (78%), Gaps = 3/210 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYL K+VL GDSGVGK+NLLSRFT+NEF+LES+STIGVEFATRS+ ID K +KAQI
Sbjct: 25 EDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLKAQI 84
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQ+RYRAIT+AYYR AVG + VYD+ + TF N+ +WL+E R TD ++I+ML+GN
Sbjct: 85 WDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILMLVGN 144
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
KTDLRHL AVS+++ +++AE+ ++ ++ETSALD T+V+ AF +L +IY +S++ ++
Sbjct: 145 KTDLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKGLKDD 204
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ G LPS +++++ + KR CC
Sbjct: 205 TGGF--NLPSVVDSMDIGITETEEKR-KCC 231
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/213 (55%), Positives = 156/213 (73%), Gaps = 2/213 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D LFK+VLIGDSGVGK+NL SRFT +EFNLESKSTIGV+FAT++++ID KVVKA
Sbjct: 3 RKDSNIGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGA+LVYD+++ TF N+ +WL EL+E+ ++I+MLI
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLI 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DL+HL V TED +A+Q+ + FMETSALD+ NVE AF + + IY ++SK
Sbjct: 123 GNKCDLKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISKHP-- 180
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ + + +P+ I + KR CC+
Sbjct: 181 SFNMNETNIIPTNNLPIQEPNIKQSAKRKFCCT 213
>gi|102139910|gb|ABF70059.1| GTP-binding protein, putative [Musa acuminata]
Length = 175
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 117/173 (67%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
Query: 46 IGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVG 105
+ F L+ K+ ++ + A RYRAITSAYYRGAVGALLVYDVTRH TF+NV
Sbjct: 2 FNLRFLVYRLQFAQKISRSMNINLAYNCRYRAITSAYYRGAVGALLVYDVTRHTTFENVS 61
Query: 106 RWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVEN 165
RWLRELR+HTDPNII+MLIGNK+DLRHLVAV TEDGKA+AE+ESLYFMETSAL+ATNV+N
Sbjct: 62 RWLRELRDHTDPNIIIMLIGNKSDLRHLVAVPTEDGKAYAEKESLYFMETSALEATNVDN 121
Query: 166 AFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDD-SSVLKRIGCCS 217
AF EVLTQIY IVS++AVEAG + +S PS GE INVKDD S+ ++++ CCS
Sbjct: 122 AFAEVLTQIYHIVSRKAVEAGDDAASSAPPSTGERINVKDDASTTMRKLSCCS 174
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 155/214 (72%), Gaps = 2/214 (0%)
Query: 6 PDEE--YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
DEE +YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ ID K VK
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF +VGRWL EL+ H+D + +ML
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK DL ++ VS E+GK+ AE E L+FMETSALD+TNV+ AF V+ +IY VS++ +
Sbjct: 123 VGNKCDLENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ + +L N D CCS
Sbjct: 183 NSDTYKAELSLNRVTLVNNGSDSKQAQGYFSCCS 216
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 144/171 (84%), Gaps = 1/171 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ ++EYDYL K+VLIGDSGVGKSNLLSRF KNEFNLESK+TIGVEF T+++ +K++KA
Sbjct: 4 RGEDEYDYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAV A LVYD+T+ TFQNV +WL+EL+++ D NI+VML+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
GNKTDL +L AV ED + +AE+ L F+ETSALD+TNV AF +++ QIY
Sbjct: 124 GNKTDLNNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQII-QIY 173
>gi|102139999|gb|ABF70134.1| GTP-binding protein, putative [Musa balbisiana]
Length = 192
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 113/143 (79%), Positives = 129/143 (90%)
Query: 75 YRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLV 134
YRAITSAYYRGAVGALLVYDVTRH TF+NV RWLRELR+HTDPNIIVMLIGNK+DLRHLV
Sbjct: 49 YRAITSAYYRGAVGALLVYDVTRHTTFENVSRWLRELRDHTDPNIIVMLIGNKSDLRHLV 108
Query: 135 AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTL 194
AV TEDGKA+AE+ESLYFMETSAL+ATNV+NAF EVLTQIY IVS++AVEAG + +S
Sbjct: 109 AVPTEDGKAYAEKESLYFMETSALEATNVDNAFAEVLTQIYHIVSRKAVEAGDDAASSAP 168
Query: 195 PSKGETINVKDDSSVLKRIGCCS 217
PS GE INVKDD+S ++++ CCS
Sbjct: 169 PSTGERINVKDDASTMRKLSCCS 191
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 151/210 (71%), Gaps = 1/210 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E +YLFK+V+IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+++ ID+K VKAQIW
Sbjct: 8 EAEEYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIW 67
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RA+TSAYYRGA GALLVYDV+R +TF NVGRWL+EL H+D + ML+GNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNK 127
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL ++ V E+GKA AE E L+FMETSALD+TNV AF V+ +IY VS++ + + S
Sbjct: 128 CDLENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKILNSDS 187
Query: 188 NGTASTLPSKG-ETINVKDDSSVLKRIGCC 216
TL KD R GCC
Sbjct: 188 YKAELTLNRVSIHNDGSKDGQKQGSRFGCC 217
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 143/178 (80%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+ DYLFK+VLIGDS VGKSNLL+RF +NEF SKSTIGVEF T+ L ID K +KAQIW
Sbjct: 9 QSQDYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIW 68
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RA+TSAYYRGAVGALLVYD++R TF +VGRWL EL H+D N++ +L+GNK
Sbjct: 69 DTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTILVGNK 128
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
TDL+H VST +G+A AE + L+FMETSALD++NV AF V+ +IY I+S++ ++
Sbjct: 129 TDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQS 186
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 149/180 (82%), Gaps = 1/180 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DN 59
MA + +E YDYLFK+V+IGDSGVGKSNLL R+TK +FN+ESK+TIGVEFAT+S++ D
Sbjct: 1 MATTRDEEVYDYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDK 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
KVVKAQIWDTAGQERYRAIT+AYYRGAVGALLVYDVT +FQ+V WL+EL+++ D NI
Sbjct: 61 KVVKAQIWDTAGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNI 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+++L+GNKTDL+ V E+ A+A+Q SL F+ETSALD +NV+ AF ++ +IYK++S
Sbjct: 121 VILLVGNKTDLKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVIS 180
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 144/181 (79%), Gaps = 2/181 (1%)
Query: 3 GYKPDEEY--DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
Y DEE DYLFK+VL+GDS VGKSNLL+RF +NEF SKSTIGVEF T+ L ID K
Sbjct: 2 AYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF +VGRWL EL H+D N++
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+L+GNKTDL+H VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S+
Sbjct: 122 TILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSR 181
Query: 181 R 181
+
Sbjct: 182 K 182
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 146/178 (82%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEE DYLFK VLIGDS VGKSNLLSRF+++EF L+SK TIGVEFA R++R+ +K++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATF NV +WL ELRE+ +P ++V+L GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGN 125
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
K DL H V E+GK AE E L FMETSAL+ NVE AF E++T+I+ I S++++E
Sbjct: 126 KCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQKSLE 183
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 124/228 (54%), Positives = 161/228 (70%), Gaps = 19/228 (8%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y D + DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYSEDNKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TFQ++GRWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ + V T +GKA AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 KRAVEAG----------SNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ + + SNG +PS+GE S GCCS
Sbjct: 181 RKVMTSQELNKQDPASLSNGKKVVIPSEGE--------SKTGGGGCCS 220
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 155/214 (72%), Gaps = 7/214 (3%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DYLFK+VL+GDS VGKSNLL+RF +NEF SKSTIGVEF T+ L I+ K VKAQIWDTA
Sbjct: 12 DYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL+ H+D N++ +L+GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
R VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S R V
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS-RKVMMSHELK 190
Query: 191 ASTLPSKGETINVKDD------SSVLKRIGCCSN 218
P G+T+ ++ D + K GCCS+
Sbjct: 191 KQDAPLDGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 149/185 (80%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M+G + + +YLFK+V+IGDS VGKSNLLSR+ +NEFN+ SK+TIGVEF T+ L ID+K
Sbjct: 1 MSGSEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF +VGRWL EL+ H D +
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVA 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DL ++ AVS ++GK+ AE E L+FMETSALD+TNV+ AF V+ +IY VS+
Sbjct: 121 MMLVGNKCDLENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSR 180
Query: 181 RAVEA 185
+ + +
Sbjct: 181 KVLNS 185
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+ DY+FK+V+IGDS VGK+ +LSRFTKNEF +SKSTIGVEF TR++ I +KV+KAQIW
Sbjct: 20 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIW 79
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF +V RW+ ELR H D +I++ML+GNK
Sbjct: 80 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNK 139
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG- 186
DL AV +ED F+E + L+F ETSAL+ NVE AF VL +IY +VSK+A+E
Sbjct: 140 ADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECDG 199
Query: 187 -SNGT-ASTLP-SKGETINVKD-DSSVLKRIGCCS 217
SNG AS L SK + I+ D + S +K++ C+
Sbjct: 200 KSNGCDASNLKGSKIDVISASDLEISEVKKLSACT 234
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 162/215 (75%), Gaps = 5/215 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+ DY+FK+V+IGDS VGK+ +LSRFTKNEF +SKSTIGVEF TR++ I +KV+KAQIW
Sbjct: 24 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIW 83
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF +V RW+ ELR H D +I++ML+GNK
Sbjct: 84 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNK 143
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG- 186
DL AV +ED F+E + L+F ETSAL+ NVE AF VL +IY +VSK+A+E
Sbjct: 144 ADLVDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECDG 203
Query: 187 -SNGT-ASTLP-SKGETINVKD-DSSVLKRIGCCS 217
SNG AS L SK + I+ D + S +K++ C+
Sbjct: 204 KSNGCDASNLKGSKIDVISASDLEISEVKKLSACT 238
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 149/185 (80%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M+G + + +YLFK+V+IGDS VGKSNLLSR+ +NEFN+ SK+TIGVEF T+ L ID+K
Sbjct: 1 MSGSEDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF +VGRWL EL+ H D +
Sbjct: 61 EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVA 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DL ++ AVS ++GK+ AE E L+FMETSALD+TNV+ AF V+ +IY VS+
Sbjct: 121 MMLVGNKCDLENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSR 180
Query: 181 RAVEA 185
+ + +
Sbjct: 181 KVLNS 185
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/168 (67%), Positives = 142/168 (84%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF +NEF+L+SK+TIGVEF TR+L ID + VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
K+DL L AV TED K FAE+E+L+FMETS L++ NVE+AF VLT+I
Sbjct: 129 KSDLGTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/141 (78%), Positives = 131/141 (92%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQ 147
K+DLRHL AV T++ +AFAE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/141 (78%), Positives = 131/141 (92%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQ 147
K+DLRHL AV T++ +AFAE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 161/221 (72%), Gaps = 17/221 (7%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+ DYLFK+VL+GDS VGKSNLL+RF +NEF SKSTIGVEF T+ L ID K +KAQIW
Sbjct: 9 QSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIW 68
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RA+TSAYYRGAVGALLVYD++R TF +VGRWL EL H+D N++ +L+GNK
Sbjct: 69 DTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVVTILVGNK 128
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA----- 182
TDL+H VST +G+A AE + L+FMETSALD++NV AF V+ +IY I+S++
Sbjct: 129 TDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLE 188
Query: 183 -----VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+++ SNG A L +GET + +S R CCS+
Sbjct: 189 QKKSELQSLSNGKAVVL--QGET----NQTSSGGRW-CCSS 222
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 159/211 (75%), Gaps = 5/211 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+++ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD++R +TF++VGRWL EL+ H+D + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
+ AVS E+GKA AE E L+FMETSALD+TNV+ AF V+ IY +S++ + S+
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL--NSDTY 187
Query: 191 ASTLPSKGETINVKDDS-SVLKRIG--CCSN 218
+ L K VKDD+ S + G CCS+
Sbjct: 188 KTELSMKNRVSLVKDDNKSSTQGFGFSCCSS 218
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 153/214 (71%), Gaps = 2/214 (0%)
Query: 6 PDEE--YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
DEE +YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ ID K VK
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF +VGRWL EL+ H+D + +ML
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK DL ++ VS E+ K AE E L+FMETSALD+TNV+ AF V+ +IY VS++ +
Sbjct: 123 VGNKCDLENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ + +L N D CCS
Sbjct: 183 NSDTYKAELSLNRVTLVNNGNDSKQAQSYFSCCS 216
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 112/175 (64%), Positives = 143/175 (81%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEFN+ SK+TIGVEF T+SL ID+K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TF +V RWL EL+ H D + +ML+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
++ AVS E+GK+ AE + L+FMETSALD+TNV AF V+ +IY VS++ + +
Sbjct: 131 ENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVLNS 185
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 164/223 (73%), Gaps = 7/223 (3%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
M Y +E+ DYLFK+VLIGDS VGKSNLL+R+ +NEF SKSTIGVEF T++++ID
Sbjct: 1 MMSYAGEEQTEDYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDG 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF N+ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +++GNKTDL VSTE+G A AE +++YF+ETSALD+TNV+ AF V+ +IY I+S
Sbjct: 121 VTVIVGNKTDLLDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILS 180
Query: 180 KRAVEAGSNGTASTLPSKGETINVK--DDSSVLKRIG---CCS 217
++ + S + S G+T+ ++ + S K+ G CCS
Sbjct: 181 RKVLSCQEQKLESKI-SNGKTVVLQEAESESTAKQTGKLWCCS 222
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 157/211 (74%), Gaps = 5/211 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+++ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD++R +TF++VGRWL EL+ H+D + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
+ AVS E+GKA AE E L+FMETSALD+TNV+ AF V+ IY VS++ + S+
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQL--NSDTY 187
Query: 191 ASTLPSKGETINVKDDSSVLKR---IGCCSN 218
+ L K VKDD+ + CCS+
Sbjct: 188 KTELSMKNRVSLVKDDNKGSTQGFGFSCCSS 218
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 159/211 (75%), Gaps = 6/211 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEF+ SK+TIGVEF T+S+ I+ K VKAQIWDTA
Sbjct: 53 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 112
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TF++VGRWL EL+ H+D + ML+GNK DL
Sbjct: 113 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 172
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
++ AVS E+GKA AE+E L+F+ETSALD+TNV+ AF V+ IY VS++ + + +
Sbjct: 173 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 232
Query: 191 ASTLPSKGETINVKDDSSVLKR---IGCCSN 218
T+ VKDD+S K+ CCS+
Sbjct: 233 ELTV---NRVSLVKDDNSASKQSSGFSCCSS 260
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 113/176 (64%), Positives = 146/176 (82%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAG ERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 66 TAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 125
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
DL HL AV T++ K FA + + F ETSAL++ NV+ AF E++ I+++VSK V+
Sbjct: 126 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVD 181
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 160/212 (75%), Gaps = 8/212 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE Y+++FK+VLIG+SGVGKSNLLSRFTKNEF+ +S++TIGVEF+TR++++++ +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H T+++V RWL+EL +H D +++VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
KTDL +V +E+ K FA++ L F+ETSAL++TNVE AF VL +I++ VS R V G
Sbjct: 124 KTDLESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSREVLRG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
P ++N S + CC N
Sbjct: 184 --------PISAVSLNSSGAESTEENKPCCRN 207
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 159/211 (75%), Gaps = 6/211 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEF+ SK+TIGVEF T+S+ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TF++VGRWL EL+ H+D + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
++ AVS E+GKA AE+E L+F+ETSALD+TNV+ AF V+ IY VS++ + + +
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 191 ASTLPSKGETINVKDDSSVLKR---IGCCSN 218
T+ VKDD+S K+ CCS+
Sbjct: 190 ELTV---NRVSLVKDDNSASKQSSGFSCCSS 217
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 142/166 (85%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+P+E+YDYLFK+V+IGDSGVGK+N+LSRFTK+EF++ESK TIGVEFAT+++ DNK++KA
Sbjct: 3 RPEEDYDYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQE+YRAIT+AYYRGAVGAL ++D+T+ TF N+ +WL EL+E+ DPNI++ML+
Sbjct: 63 QIWDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEV 170
GNK DL AV TED AFAE+ L ++ETSALD+TNV+ AF V
Sbjct: 123 GNKCDLNENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRV 168
>gi|297740535|emb|CBI30717.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/163 (72%), Positives = 134/163 (82%), Gaps = 25/163 (15%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+ SKSTIGVEFATRSL +D K
Sbjct: 1 MAGYRAEDDYDYLFKV-------------------------SKSTIGVEFATRSLNVDGK 35
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 36 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 95
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNV 163
VMLIGNK+DLRHLVAVSTEDGK+FAE+ESLYFMETSAL+ATN+
Sbjct: 96 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNL 138
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EE DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA R++++ +K++KAQI
Sbjct: 9 EEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +++++VGRWL ELRE ++V+L+GN
Sbjct: 69 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL V E+ K FAE E L FMETSAL NVE F +++T I+ I ++R+++A
Sbjct: 129 KCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 188
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ T L S G+ I++ D+ + K+ CCS
Sbjct: 189 MDETPINL-SNGKEIHIADEVTATKQAPCCS 218
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/221 (53%), Positives = 160/221 (72%), Gaps = 7/221 (3%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
Y E+ DY+FK+V+IGDS VGK+ +LSRF KNEF +SKSTIGVEF TR++ I+ KV+K
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIK 82
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F +V RW+ ELR H D +I++ML
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK DL V TED FAE + L+F ETSAL NVE+AF ++L +I ++VSK+A+
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 184 EAG---SNGTASTLPSKGETINV----KDDSSVLKRIGCCS 217
E G NG + KG +++ + + S +K++ CS
Sbjct: 203 ECGLGKENGDTNVASLKGTKVDIILGPELEISEMKKLSSCS 243
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 157/212 (74%), Gaps = 7/212 (3%)
Query: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQ 72
+FK+V++GDSGVGKS LL+RF KNEF+++SK TIGVEF TR++ +D+K+VKAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRH 132
ERY+AIT+AYYRGA ALL YD+T+ TF +V +WL ELR HTD NI+VML+GNK+DL
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 133 LVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG---SNG 189
L AV TE + FA+QE L+F+ETSALD++NVE+AF +L+Q+Y+ VS++ + SN
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLILVDGHESNW 180
Query: 190 TASTLPSKGETINVKDD----SSVLKRIGCCS 217
L +G I V + KR CCS
Sbjct: 181 DKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 212
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 159/217 (73%), Gaps = 8/217 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+ DY+FK+V+IGDS VGK+ +LSRFTKNEF +SKSTIGVEF TR++ I +KV+KAQIW
Sbjct: 3 EKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF +V RW+ ELR H D +I++MLIGNK
Sbjct: 63 DTAGQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIGNK 122
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL L AV TED FAE++ L+F ETSAL NV+ AF +L +IY ++ K+++E G
Sbjct: 123 ADLVDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSLECG- 181
Query: 188 NG---TASTLPSKGETIN----VKDDSSVLKRIGCCS 217
NG A + +G I+ + S +K++ CS
Sbjct: 182 NGNPHAADAITLRGSKIDGISGTDLEISEMKKLSACS 218
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 155/212 (73%), Gaps = 8/212 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE Y+++FK+VLIG+SGVGKSNLLSR+TKNEFN +S++TIGVEF+TR++ ++ +KAQI
Sbjct: 4 DEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H T+ ++ RWL+EL EH + NI+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
KTDL +V TE+ + FAE L F+E+SAL++TNVE AF VL +I K + + G
Sbjct: 124 KTDLELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKELVQG 183
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+N S SK E I + CC N
Sbjct: 184 ANRGVSLNSSKAEIIT--------ENKPCCRN 207
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 164/225 (72%), Gaps = 7/225 (3%)
Query: 1 MAGYKPDEEYD-YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y D++ D YLFK+VLIGDS VGKSNLL+RF +NEF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYSEDDKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++G+WL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 KRAVEAGS-NGTASTLPSKGETINVKDD-----SSVLKRIGCCSN 218
++ + + N + G+T+ +K D ++ K+ CCS+
Sbjct: 181 RKVMMSQELNKPGAPELGNGKTVVLKGDGDQEGNAGTKKGWCCSS 225
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/185 (62%), Positives = 148/185 (80%), Gaps = 15/185 (8%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++YDYLFK+VLIGDSGVGKSN+LSRFT+NEF++ESKSTIGVEFATRS+ I+ KVVKAQIW
Sbjct: 6 DDYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHA---------------TFQNVGRWLRELR 112
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF +V +WL ELR
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKWLAELR 125
Query: 113 EHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
+H D I++ML GNK DL+HL +V+T+D + +A +E L F+ETSAL++ N++ AF +VL+
Sbjct: 126 DHADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQKVLS 185
Query: 173 QIYKI 177
I+++
Sbjct: 186 VIHEV 190
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 159/211 (75%), Gaps = 6/211 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEF+ SK+TIGVEF T+S+ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TF++VGRWL +L+ H+D + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
++ AVS E+GKA AE+E L+F+ETSALD+TNV+ AF V+ IY VS++ + + +
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 191 ASTLPSKGETINVKDDSSVLKR---IGCCSN 218
T+ VKDD+S K+ CCS+
Sbjct: 190 ELTV---NRVSLVKDDNSASKQSSGFSCCSS 217
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 158/221 (71%), Gaps = 8/221 (3%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K E+ DY+FK+V+IGDS VGK+ +LSRFTKNEF +SKSTIGVEF T+++ I+ K++KA
Sbjct: 12 KLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKA 71
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF +V RW+ ELR H D +I++MLI
Sbjct: 72 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLI 131
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DL V TED FAE + L+F ETSA NV +AF ++L +I K+VSKR++E
Sbjct: 132 GNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLE 191
Query: 185 AGS----NGTASTLPSKGETINVKDDS----SVLKRIGCCS 217
+ NG KGE I++ S S +K++ CS
Sbjct: 192 CNNGIKGNGNHDVAALKGEKIDIISASELEISEIKKLHSCS 232
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 162/223 (72%), Gaps = 5/223 (2%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y +E+ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL H+D N+
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ V+T +GKA AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 KRA-VEAGSNGTASTLPSKGETINVKDDSSV---LKRIGCCSN 218
++ + N T G+T+ ++ + V + GCCS+
Sbjct: 181 RKVMISQELNKQDVTRIENGKTVVLQGEGDVEAAQSKKGCCSS 223
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 155/212 (73%), Gaps = 3/212 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E +YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ ID K VKAQIW
Sbjct: 8 ETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKDVKAQIW 67
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RA+TSAYYRGA GALLVYD++R +TF NVGRWL+EL H+D + ML+GNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNK 127
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL ++ V E+GKA AE E L+FMETSALD+TNV AF V+ +IY VS++ + + S
Sbjct: 128 CDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNSDS 187
Query: 188 NGTASTLP---SKGETINVKDDSSVLKRIGCC 216
+L SK V + L+R+ CC
Sbjct: 188 YKAELSLNRDWSKWAEKCVGRRFTGLERMDCC 219
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 112/170 (65%), Positives = 143/170 (84%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+TK EFNLESKSTIGVEFAT++++ DNK +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RA+TSAYYRGAVGALLVYDV++H+T++ V +WL+ELR+ DP I++ML+GNK+DLRHL
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
V TE+ K+FA++ +L F+ETSA +TNVE AF +L +IYK V + A
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVRNTAPA 170
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 151/201 (75%), Gaps = 14/201 (6%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAG 71
YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+SL ID+K VKAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
QER+RA+TSAYYRGAVGAL+VYD++R TF +VGRWL EL+ H D + +ML+GNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 132 HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS---- 187
++ VS E+GK+ AE E L+FMETSALD+TNV+ AF V+ +IY VS++ + + +
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSDTYKAE 193
Query: 188 ----------NGTASTLPSKG 198
NG +++ SKG
Sbjct: 194 LSVNRVSLVNNGNSTSKQSKG 214
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 242 bits (618), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/221 (54%), Positives = 158/221 (71%), Gaps = 8/221 (3%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K E+ DY+FK+V+IGDS VGK+ +LSRFTKNEF +SKSTIGVEF T+++ I+ K++KA
Sbjct: 1 KLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKA 60
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF +V RW+ ELR H D +I++MLI
Sbjct: 61 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLI 120
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DL V TED FAE + L+F ETSA NV +AF ++L +I K+VSKR++E
Sbjct: 121 GNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLE 180
Query: 185 AGS----NGTASTLPSKGETINVKDDS----SVLKRIGCCS 217
+ NG KGE I++ S S +K++ CS
Sbjct: 181 CNNGIKGNGNHDVAALKGEKIDIISGSELEISEIKKLHSCS 221
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 155/214 (72%), Gaps = 12/214 (5%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLLSR+ +NEF++ SK+TIGVEF T+S+ D K +KAQIWDTA
Sbjct: 8 DYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++VGRWL EL+ H+D NI+ ML+GNK DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGNKCDL 127
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS--- 187
L V E+ KA AE E L+F+ETSAL+ATNV +AF V+ ++Y +S++A+ + S
Sbjct: 128 ETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSDSYKS 187
Query: 188 -----NGTASTLPSKGETINVKDDSSVLKRIGCC 216
T +L G+ + LK+ CC
Sbjct: 188 KLLSNRSTKVSLVPNGDAAT----KTELKKYACC 217
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 158/211 (74%), Gaps = 9/211 (4%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAG 71
+LFK+VLIG SG G+SNLLSRF +NEFNL+SKST G++FATRS+++D K +KAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
QER RA TSAYYR A+GALLV+D+ +H T++NV RWL+E R+H D NI++ML+ NK+DL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 132 HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV----EAGS 187
HL AV T++ +AFAE+ L F+E+SAL TNVE AF +LT+IY+ VS++ + E
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQISDRRENDM 180
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ +++ +P I+V + ++ CC N
Sbjct: 181 SPSSNMVP-----IHVPPTTESKPKMQCCQN 206
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/223 (53%), Positives = 163/223 (73%), Gaps = 5/223 (2%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y +E+ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL H+D N+
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ V T +GKA AE + L+FMETSALD++NV +AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILS 180
Query: 180 KRAVEAGSNGTAST-LPSKGETINVKD---DSSVLKRIGCCSN 218
++ + + T G+T+ +++ + V + GCCS+
Sbjct: 181 RKVMMSQELKKQDTPWTENGKTVVLQEGDREVEVESKKGCCSS 223
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 154/214 (71%), Gaps = 7/214 (3%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DYLFK+VL GDS VGKSNLL+RF +NEF +SKSTIGVE T+ L I+ K VKAQIWDTA
Sbjct: 12 DYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL+ H+D N++ +L+GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
R VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S R V
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS-RKVMMSHELK 190
Query: 191 ASTLPSKGETINVKDD------SSVLKRIGCCSN 218
P G+T+ ++ D + K GCCS+
Sbjct: 191 KQDAPLDGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/213 (58%), Positives = 155/213 (72%), Gaps = 21/213 (9%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEAAF------------------QTILTEIYRIVSQKQMSDR 166
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 167 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 197
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 151/207 (72%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLL+R+ +NEFNL SK+TIGVEF T++L ID K VKAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGA GAL+VYD+TR TF ++ RWL EL+ H+D + ML+GNK DL
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDL 121
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
++ AVS E+GK+ AE E ++FMETSALDATNV AF V+ +IY VS++ + + S
Sbjct: 122 DNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSDSYKA 181
Query: 191 ASTLPSKGETINVKDDSSVLKRIGCCS 217
++ N D S + CCS
Sbjct: 182 ELSVNRVSLVDNGTDGSKQNQGYSCCS 208
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 154/212 (72%), Gaps = 6/212 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+ K VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF +VG+WL EL H+D N++ +L+GNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTILVGNKSDL 131
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
+ VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S++ + N
Sbjct: 132 KDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSRKVMSNEFNKQ 191
Query: 191 ASTLPSKGETINVKDDSS------VLKRIGCC 216
+ L G+T+ ++ D S GCC
Sbjct: 192 DAPLMGNGKTVVLQGDGSQEAIAEPRNGGGCC 223
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/146 (73%), Positives = 133/146 (91%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLAGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYF 152
K+DLRHL AV T++ +AFAE+ ++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTILY 150
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/218 (54%), Positives = 156/218 (71%), Gaps = 12/218 (5%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D DYLFK+VLIGDS VGKSNLLSR+ +NEF++ SK+TIGVEF T+S+ D K +KAQI
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF++VGRWL EL+ H+D NI+ ML+GN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL L V E+ KA AE E L+F+ETSAL+ATNV +AF V+ ++Y +S++A+ +
Sbjct: 124 KCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSD 183
Query: 187 S--------NGTASTLPSKGETINVKDDSSVLKRIGCC 216
S T +L G+ + LK+ CC
Sbjct: 184 SYKPKLLSNRSTKVSLVPNGDAAT----KTGLKKYACC 217
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 160/215 (74%), Gaps = 14/215 (6%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEF+ SK+TIGVEF T+S+ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TF++VGRWL EL+ H+D + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
++ AVS ++GKA AE E L+F+ETSALD+TNV+ AF V+ IY VS++ +
Sbjct: 130 ENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQL------N 183
Query: 191 ASTLPSKGETIN----VKDDSSVLKR---IGCCSN 218
+ T K T+N VKDD+S K+ CCS+
Sbjct: 184 SDTYKDK-LTVNRVSLVKDDNSASKQSSGFSCCSS 217
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 143/175 (81%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ ID K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF +VGRWL EL+ H+D + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
++ V+ E+GK+ AE E L+FMETSALD+TNV+ AF V+ +IY VS++ + +
Sbjct: 130 ENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNS 184
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/204 (56%), Positives = 158/204 (77%), Gaps = 2/204 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M G +YD+LFK+VLIGDSGVGKSNLLSRFT NEFNL+SK+TIGVEFATR++ ++ K
Sbjct: 1 MQGEDYGYDYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAIT+AYYR AVGAL+VYD+T+ ++++N WL EL+++ D N+
Sbjct: 61 KIKAQIWDTAGQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVA 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
V LIGNK+DL H AV T++ + +A++ L F ETSAL+A NV+ AF ++T IY+++SK
Sbjct: 121 VGLIGNKSDLDHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISK 180
Query: 181 RAVEAG-SNGTASTLPSKGETINV 203
++ ++G + P KG TI++
Sbjct: 181 NQLDLNDASGNNANAP-KGPTISL 203
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 143/175 (81%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+ + ID K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD++R +TF +VGRWL EL+ H+D + +ML+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 130
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
++ VS EDG + AE E L+FMETSALD+TNV+ AF V+ +IY VS++ + +
Sbjct: 131 ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNS 185
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 162/226 (71%), Gaps = 11/226 (4%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y DE+ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAHYNEDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF ++GRWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ V+T +GKA AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 KRAVEAGSNGTASTLP--SKGETI-----NVKDDSSVLKRIGCCSN 218
R V T +P G+++ N++ D K GCCS+
Sbjct: 181 -RKVMMSQELTKHEVPRIENGKSVVIQGENLEADGQSKK--GCCSS 223
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/229 (53%), Positives = 163/229 (71%), Gaps = 14/229 (6%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y +E+ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL H+D N+
Sbjct: 61 KEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ V+T +GKA AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 KRAVEAG----------SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
++ + + NG L +GE + + D+ KR CCS+
Sbjct: 181 RKVMMSQELNKQDVTRIENGKTVVLQGEGEG-DGEADAQSKKR--CCSS 226
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 155/212 (73%), Gaps = 3/212 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E +YLFK+V+IGDS VGKSNLLSR+ +NEFNL SK+TIGVEF T+S+ I+ K VKAQIW
Sbjct: 8 ETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIW 67
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RA+TSAYYRGA GALLVYD++R +TF NVGRWL+EL H+D + ML+GNK
Sbjct: 68 DTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNK 127
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL ++ V E+GKA AE E L+FMETSALD+TNV AF V+ +IY VS++ + + S
Sbjct: 128 CDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSRKILNSDS 187
Query: 188 NGTASTLP---SKGETINVKDDSSVLKRIGCC 216
+L SK V + L+R+ CC
Sbjct: 188 YKAELSLNRDWSKWAEKCVGRRFTGLERMDCC 219
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 163/221 (73%), Gaps = 19/221 (8%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EE++++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR+L +D +VK+QI
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H +++NV RWL+EL +H D +I+VML+GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KTDLR-HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
K DL+ V +E+ KA+AEQ L F+ETSALDATNVE AF +L IY V K ++
Sbjct: 125 KCDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIYTRVLK--LKG 182
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRI--------GCCSN 218
G PS TIN+ ++S + I CC N
Sbjct: 183 GIQQ-----PS---TINLSKEASPTQSITQVTEQKRSCCQN 215
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 159/205 (77%), Gaps = 4/205 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
+ YD+LFK+VLIGDSGVGKSNLL R+TKN+F + S+STIGVEFATRS++++++ V+AQIW
Sbjct: 9 DHYDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQIW 68
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYR AVGALLVYD+T++ T+QN+ RW+ ELREH + +I V+L+GNK
Sbjct: 69 DTAGQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGNK 128
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
+DL+ AVS E+ A+A+ +++F+ETSALDATNVE AF +V+ IY+ ++ G
Sbjct: 129 SDLKSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIYQT----QIKEGQ 184
Query: 188 NGTASTLPSKGETINVKDDSSVLKR 212
+ ++ N K D+S L++
Sbjct: 185 DDNNQDQYTQNNDQNNKGDNSTLRQ 209
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 155/204 (75%), Gaps = 5/204 (2%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFT N+FN+ESKSTIGVEFATR++ ++ K +KAQIWDTAGQERY
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERY 87
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+DL HL A
Sbjct: 88 RAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRA 147
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V T++ + FA++ L F ETSAL + NVE AF E++T IY++VSK V+ G +G +
Sbjct: 148 VPTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVSKHQVDLGDSGNNNA-- 205
Query: 196 SKGETINVKDDSSVLKRIG---CC 216
KG TI++ + K+ CC
Sbjct: 206 PKGPTISLTPAPNEHKKKSSGNCC 229
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 162/229 (70%), Gaps = 11/229 (4%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA +EE DYLFK VLIGDS VGKSNLLSRF+K+EF +SK TIGVEFA R++ + +K
Sbjct: 1 MAEDTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF N+ +WL ELR+ +P +
Sbjct: 61 IIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
V+L+GNK+DLR V ++GK AE E LYF+ETSAL+ NVE AF ++ +I+++V++
Sbjct: 121 VVLVGNKSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQ 180
Query: 181 R-AVEAGSNGTA----------STLPSKGETINVKDDSSVLKRIGCCSN 218
R A E SNG A + LP E +N+ + ++ + SN
Sbjct: 181 RIASENKSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSN 229
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 156/210 (74%), Gaps = 5/210 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E+YD+L+K+VLIG+SGVGKSNLL RFT+NEF+ E +STIGVEFATRS++ + KV++AQI
Sbjct: 2 EEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQI 61
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ RWL EL+++ DP I++M+IGN
Sbjct: 62 WDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGN 121
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL V K F ++++L+F ETSALD TNVE AF +L +I+K + AVE
Sbjct: 122 KADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK-QNASAVEES 180
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
SN P++ + + S + GCC
Sbjct: 181 SNDK----PAEKPDVVPIEPSPKENKGGCC 206
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/222 (53%), Positives = 161/222 (72%), Gaps = 8/222 (3%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
Y E+ DY+FK+V+IGDS VGK+ +LSRF KNEF +SKSTIGVEF TR++ I+ KV+K
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIK 82
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F +V RW+ ELR H D +I++ML
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK DL V TED FAE + L+F ETSAL NVE+AF ++L +I ++VSK+A+
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 184 EAG---SNGTASTLPS-KGETINV----KDDSSVLKRIGCCS 217
E G NG + + S G +++ + + S +K++ CS
Sbjct: 203 ECGYGKENGDNNVVASLNGTKVDIILGPELEISEMKKLSSCS 244
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 155/209 (74%), Gaps = 5/209 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YD+L+K+VLIG+SGVGKSNLL RFT+NEF+ E +STIGVEFATRS++ + KV++AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ RWL EL+++ DP I++M+IGNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL V K F ++++L+F ETSALD TNVE AF +L +I+K + AVE S
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK-QNASAVEESS 182
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
N P++ + + S + GCC
Sbjct: 183 NDK----PAEKPDVVPIEPSPKENKGGCC 207
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/209 (55%), Positives = 155/209 (74%), Gaps = 5/209 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YD+L+K+VLIG+SGVGKSNLL RFT+NEF+ E +STIGVEFATRS++ + KV++AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ RWL EL+++ DP I++M+IGNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL V K F ++++L+F ETSALD TNVE AF +L +I+K + AVE S
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK-QNASAVEESS 182
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
N P++ + + S + GCC
Sbjct: 183 NDK----PTEKPDVVPIEPSPKENKGGCC 207
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 163/224 (72%), Gaps = 6/224 (2%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y +E+ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ V T +GK+ AE + L+F+ETSALD++NV NAF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILS 180
Query: 180 KRAV--EAGSNGTASTLPSKGETINVKDDSSV---LKRIGCCSN 218
++ + + S + + T+ ++ + V K+ GCCS+
Sbjct: 181 RKVMISQELKKQDVSWMENGKTTVVIQGEDQVEGEPKKGGCCSS 224
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 154/220 (70%), Gaps = 18/220 (8%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+ K +KAQI
Sbjct: 8 DRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGKEIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL H+D N++ +L+GN
Sbjct: 68 WDTAGQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVVTILVGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL+ + V T +GKA AE + L+FMETSA D++NV AF V+ +IY I+S++ + +
Sbjct: 128 KSDLKDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSRKVMSSQ 187
Query: 187 ----------SNGTASTLPSKGETINVKDDSSVLKRIGCC 216
SNG +PS+ + K+ GCC
Sbjct: 188 ELNKQDPASLSNGKKVVIPSEAQ--------GEAKKGGCC 219
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 115/212 (54%), Positives = 157/212 (74%), Gaps = 7/212 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA DEE DYLFK VLIGDS VGKSNLLSRF+++EF L+SK TIGV+FA R++R+ +K
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF+N+G+WL ELR + P +
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
V+L+GNK+DL V E+GK AE E LYF+ETSAL+ NVE AF ++ +I++++++
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 R-AVEAGSNG------TASTLPSKGETINVKD 205
+ AV+ NG + +P E +N+ +
Sbjct: 181 KTAVDNRPNGDGNNESNGAVIPPSKEIVNIHE 212
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 139/177 (78%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+ + ID K VKAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF NV RWL EL+ H D N++ ML+GNK+DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDL 127
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
H+ V EDG+ AE E L+F+ETSALD TNV AF V+ +IY VSK+ + + S
Sbjct: 128 EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKMLNSDS 184
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 153/212 (72%), Gaps = 1/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE+ DYLFK VL GDSGVGKSNLLSRF+KNEF +S+ TIGVEFA R++++ +K+VK QI
Sbjct: 6 DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ATF N+ +WLRELRE +P ++++L+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL V E+ + AE E+L+FMETSA D NVE AF E++ +I+ I S++ ++
Sbjct: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
Query: 187 SN-GTASTLPSKGETINVKDDSSVLKRIGCCS 217
P+ E I++ + + CCS
Sbjct: 186 KKFEKLVAFPNGKEIISIHEVTPTKHNSNCCS 217
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 157/211 (74%), Gaps = 5/211 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ +NEFN SK+TIGVE T+++ I+ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
QER+RA+TSAYYRGAVGAL+VYD++R +TF++VGRWL EL+ H+D + ML+GNK DL
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
+ AVS E+GKA AE E L+FMETSALD+TNV+ AF V+ IY +S++ + S+
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQL--NSDTY 187
Query: 191 ASTLPSKGETINVKDDS-SVLKRIG--CCSN 218
+ L K VKDD+ S + G CCS+
Sbjct: 188 KTELSMKNRVSLVKDDNKSSTQGFGFSCCSS 218
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 162/226 (71%), Gaps = 29/226 (12%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EE++++FK+VLIG+SGVGK+NLLSRFT+NEFN +S++TIGVEF+TR+L ID +VK+QI
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H ++++V RWL+EL +H D +I+VML+GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KTDLR-HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
K DL+ V +E+ KA+AE+ L F+ETSALDATNVE AF +L IY V
Sbjct: 125 KCDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRV------- 177
Query: 186 GSNGTASTLPSKGE-----TINVKDDSSVLKRI--------GCCSN 218
L SKGE TIN+ ++S + I CC +
Sbjct: 178 --------LKSKGETQQPSTINLSKEASPTQSITLVTEQKRSCCQS 215
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 161/213 (75%), Gaps = 4/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLR-IDNKVVKAQ 65
DE DYLFK V IG+SGVGKSNL+SRF K+EF L+SK +IGVEFA +++ + +K++KAQ
Sbjct: 8 DEHCDYLFK-VXIGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKAQ 66
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQER+RAITS+YYRGA+GA+LVYD+T+ ATF NVG+WL ELRE +++V+L+
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVR 126
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DL V E GK FAE E L FMETSAL NV+ AF E++T+I+ I+S++++E
Sbjct: 127 NKSDLDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQKSLET 186
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIG-CCS 217
NG A LPS G+ I++ D+ + K+ CCS
Sbjct: 187 KMNGAALNLPS-GKEIHIADEVTATKQAKYCCS 218
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 119/224 (53%), Positives = 161/224 (71%), Gaps = 6/224 (2%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y D++ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYSEDDKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF +VGRWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ V T +GK AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 KRAVEAGS-NGTASTLPSKGETINVKDD----SSVLKRIGCCSN 218
++ + + N + G+T+ ++ D + + GCCS+
Sbjct: 181 RKVILSQELNKPGAPELGNGKTVVLQGDGNQEGNAETKKGCCSS 224
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/215 (55%), Positives = 162/215 (75%), Gaps = 7/215 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E+++++FK+VLIG+SGVGK+NLLSRFT+NEFN +S++TIGVEF+TR+L ID +VK+QI
Sbjct: 5 EEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H ++++V RWL+EL +H D +I+VML+GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KTDLR-HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV--SKRAV 183
K+DL+ V +E+ KA+AE+ L F+ETSALDATNVE AF +L IY V SK +
Sbjct: 125 KSDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLKSKGGI 184
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ S S S ++I + ++ CC N
Sbjct: 185 QQPSTINLSKEASPTQSITQVTE----QKRSCCQN 215
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 143/172 (83%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M K DEE+D++FK+VLIGDS VGKSNLLSRFTK++F + K+TIGVEFATRS+ DNK
Sbjct: 1 MTTIKKDEEHDFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQERY++IT+AYYRGAVGALL+YD+T++ +F N+ +WL E+R+H +P+I+
Sbjct: 61 LIKAQIWDTAGQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
+ML+GNK+DL+HL V E+ FAE ++ F+E SALD++NVE +F ++T
Sbjct: 121 IMLVGNKSDLKHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLIT 172
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 150/199 (75%), Gaps = 3/199 (1%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
P++ YDYLFK+VLIGDSGVGKSNLLSR+TKNEF+L SK+TIGVE A R++ I+ K V+AQ
Sbjct: 11 PEDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQ 70
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGA+GA+LVYD+ + +F N+ +W+ ELR+H ++ ++LIG
Sbjct: 71 IWDTAGQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIG 130
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DL+HL + GK FA + + FMETSALD+TNV AF + I+ V + +E
Sbjct: 131 NKSDLKHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELE- 189
Query: 186 GSNGTASTLPSKGETINVK 204
+G A P+ GE+I +K
Sbjct: 190 -KSGQAHEKPN-GESIVIK 206
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/212 (54%), Positives = 157/212 (74%), Gaps = 2/212 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEE DYLFK VLIGDSGVGKSN+LSRF K+EF L+SK TIGVEFA R++R+ +K++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD++ ++++NV +WL ELRE +++V+L+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL V E+GK FAE E L FMETSAL NVE F +++T+IY + S++ + A
Sbjct: 126 KCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAAK 185
Query: 187 SNGTASTLPSKGETINVKDDSSVLKRIG-CCS 217
L + G+ I++ D+ + K+ CCS
Sbjct: 186 MEEQPINLLN-GKEIHIADEVTATKQTSTCCS 216
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 155/222 (69%), Gaps = 14/222 (6%)
Query: 7 DEEYDYLFKLVL--------IGDSGVGKSNLL----SRFTKNEFNLESKSTIGVEFATRS 54
++EYD+LFK + S + S ++ RFT+NEFNL+SKSTIGVEFATRS
Sbjct: 3 NDEYDFLFKGISPAKFCEGSTAPSTIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFATRS 62
Query: 55 LRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREH 114
+++D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N RWL+ELREH
Sbjct: 63 IQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREH 122
Query: 115 TDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
D NI++ML+GNK D +H+ V T D FA++ L F+ETSALDATNVE AF +LT+I
Sbjct: 123 ADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEI 182
Query: 175 YKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
Y+IVS +A+E GS+ + K I+ D+ ++ CC
Sbjct: 183 YRIVSSKALENGSSSQSPLGDRKVIEISKTQDADAKQK--CC 222
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 154/209 (73%), Gaps = 5/209 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YD+L+K+VLIG+SGVGKSNLL RFT+NEF+ E +STIGVEFATRS++ + KV++AQIW
Sbjct: 28 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 87
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ RWL EL+++ DP I++M+IGNK
Sbjct: 88 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 147
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL + K F ++++L+F ETSALD TNVE AF +L +I+K + VE S
Sbjct: 148 ADLAQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFK-QNASTVEETS 206
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
N P++ + + S + GCC
Sbjct: 207 NDK----PAEKPDVVAIEPSPKESKGGCC 231
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/181 (60%), Positives = 142/181 (78%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D++YD L K+VLIGDSGVGK+N LSRF + EF SK TIGVEFAT++L I+ ++K
Sbjct: 6 RSDDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKC 65
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAIT+AYYRGAVGALLVYDVTR ++F+++ RWL ELREH +++VML+
Sbjct: 66 QIWDTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLV 125
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL VS + G+ A++E L F+ETSALD +NVE AF+ V +I+ IV KR +E
Sbjct: 126 GNKTDLVDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLE 185
Query: 185 A 185
+
Sbjct: 186 S 186
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 138/169 (81%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YDYL+K+VLIG+SGVGKSNLL RFT+NEF+ E +STIGVEFATRS++ + KV++AQIW
Sbjct: 4 EDYDYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ ++F+++ RWL EL+++ DP I+VM++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVGNK 123
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
DL V K F E + L+F ETSALD TNVE AF +L +IYK
Sbjct: 124 ADLSQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIYK 172
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 160/212 (75%), Gaps = 15/212 (7%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YD L+KLVLIGDSGVGK+N+L++FT+ EF +SK+TIGVEFA++++ ID+K VKAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGA+++YD+T+ TF+NV +W++EL+E+ DP++ +M++GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
TD +H+ V+T+ A+A++ + F+ETSA D TNVE+AF +L QIYK S + V+
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK--SAKVVK--- 180
Query: 188 NGTASTLPSKGETINVKDDSSVL---KRIGCC 216
P+ T V D+ V+ K GCC
Sbjct: 181 -------PTPQPTKFVVADTDVVKPEKSSGCC 205
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 157/214 (73%), Gaps = 2/214 (0%)
Query: 6 PDEE-YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
DEE +YLFK+V+IGDS VGKSNLLSR+ +NEFN+ SK+TIGVEF T+S+ ID K VKA
Sbjct: 2 EDEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R +TF +V RWL EL+ H++ + ML+
Sbjct: 62 QIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLV 121
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL ++ VS E+GK+ AE E L+F+ETSALD+TNV+ AF V+ +IY +S++ +
Sbjct: 122 GNKSDLENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLN 181
Query: 185 AGSNGTASTLPSKGETINVKDDS-SVLKRIGCCS 217
+ S ++ N D + R CCS
Sbjct: 182 SDSYKAELSVNRVSLVSNGADGAKQANSRYSCCS 215
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 163/212 (76%), Gaps = 5/212 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
K D++YDYLFK+VL GDSGVGKSNLL RFTKN+FN +SK+TIGVEFATRS+ I KVVKA
Sbjct: 3 KADDDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAIT+AYYRGA+GA+LVYD+T +F+ V +W++E+RE+ D +I++M+I
Sbjct: 63 QIWDTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMII 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL A+ TE G+ A+ + FME SA D TNV+ AF +++ QIY+ ++K+ +
Sbjct: 123 GNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFIQIIQQIYQNLTKQLQK 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
S L S E ++++ +S K+ GCC
Sbjct: 183 YDQ---MSHLQS--EKLDLEITNSGNKKQGCC 209
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 158/217 (72%), Gaps = 7/217 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+V+IGDS VGK+ +LSRF KNEF +SKSTIGVEF TR++ I+ KV+KAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIW 78
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F +V RW+ ELR H D +I++MLIGNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG- 186
DL V ED FAE + L+F ETSAL NVE+AF ++L +I++++SKR++E G
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSLECGN 198
Query: 187 --SNGTASTLPSKGETINVKDDSSV----LKRIGCCS 217
+N + KG I+V + + +K++ CS
Sbjct: 199 GKANADNNLATLKGSKIDVISGAELEITDMKKLSSCS 235
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 158/216 (73%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D +YLFK+VLIGDS VGKSNLLSRF+++EF+ SK+TIGVEF T+ + I+ K V
Sbjct: 2 GKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQER+RA+TSAYYRGA GAL+VYD+TR TF++V RWL+EL H D + M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DL + AVS E+GKA AE+E L+FMETSALDATNV+ AF V+ +I+ VS++
Sbjct: 122 LVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKL 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDS-SVLKRIGCCS 217
+ + + A ++ +N +D S S + CCS
Sbjct: 182 LNSDAY-KAELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 156/206 (75%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEE DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA R++++ +K++KAQI
Sbjct: 8 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR +++++VGRWL ELRE ++V+L+GN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 127
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL V E+ K FAE E L FMETSAL NVE F +++T I+ I ++R+++A
Sbjct: 128 KCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 187
Query: 187 SNGTASTLPSKGETINVKDDSSVLKR 212
+ T S G+ I++ D+ + K+
Sbjct: 188 MDETPINHLSNGKEIHIADEVTATKQ 213
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 114/208 (54%), Positives = 153/208 (73%), Gaps = 1/208 (0%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
E DYL K+VLIGDSGVGK+NLL+RFT+++FN ESKSTIGVEFA+++++I+ K +KAQIWD
Sbjct: 5 EPDYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWD 64
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGA+GALL+YD+T TF ++ +WL+ELRE+ D IIVML+GNK
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKC 124
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN 188
DL AV++ + FA+ ++L F+ETSA +ATNV AF ++ +I ++K+ V A
Sbjct: 125 DLSEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNVAAEEK 184
Query: 189 GTASTLPSKGETINVKDDSSVLKRIGCC 216
P +G +I S K+ GCC
Sbjct: 185 ANVQETPRQGVSITA-TKSPEEKKKGCC 211
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 149/207 (71%), Gaps = 1/207 (0%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+VLIGDS VGKSNLLSRF +NEF+ SK+TIGVEF T+++ ID K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGA GAL+VYD++R TF ++ RWL EL D + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
L VSTE+GKAFAE+E L+FMETSALD+TNV+ AF V+ +IY +S++ + + S
Sbjct: 130 ESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNSDSY-K 188
Query: 191 ASTLPSKGETINVKDDSSVLKRIGCCS 217
A ++ +N L CCS
Sbjct: 189 AELSVNRVSLVNGAGSKKNLLNFSCCS 215
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 153/216 (70%), Gaps = 11/216 (5%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA +EE DYLFK VLIGDS VGKSNLLSRF+K+EF +SK TIGVEFA R++ + +K
Sbjct: 1 MAEDSYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF N+ +WL ELR+ +P +
Sbjct: 61 IIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
V+L+GNK+DLR V ++GK AE E L+F+ETSAL+ NVE AF ++ +I+++V++
Sbjct: 121 VVLVGNKSDLRQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQ 180
Query: 181 R-----------AVEAGSNGTASTLPSKGETINVKD 205
R NG + LP E +N+ +
Sbjct: 181 RIASDNKSNGAATAHINGNGNGTVLPVGKEIVNIHE 216
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/184 (61%), Positives = 145/184 (78%), Gaps = 1/184 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN- 59
M+ EEYD+LFK+VLIGDSGVGKSNLLSRFTKNEFNLESK+TIGVEFAT+S ++N
Sbjct: 1 MSAQHEQEEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENG 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
+ VK QIWDTAGQERYRAIT+ YYRGAVGALLVYD+T+ TF++V RWL+EL ++ + I
Sbjct: 61 QSVKVQIWDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGI 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+++L+GNKTDL L V E+ FA ++L F+ETSAL ++NV+ AF ++ QI+K S
Sbjct: 121 VILLVGNKTDLHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHKEAS 180
Query: 180 KRAV 183
R +
Sbjct: 181 SRLI 184
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 158/216 (73%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D +YLFK+VLIGDS VGKSNLLSRF+++EF+ SK+TIGVEF T+ + I+ K V
Sbjct: 2 GKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQER+RA+TSAYYRGA GAL+VYD+TR TF++V RWL+EL H D + M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DL + AVS E+GKA AE+E L+FMETSALDATNV+ AF V+ +I+ VS++
Sbjct: 122 LVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKL 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDS-SVLKRIGCCS 217
+ + + A ++ +N +D S S + CCS
Sbjct: 182 LNSDAY-KAELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/218 (53%), Positives = 154/218 (70%), Gaps = 20/218 (9%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEFN +S++TIGVEF+TR++ + + VVKAQI
Sbjct: 5 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGAL+V+D+T+H T+ V RWL+EL +H + +I+VML+GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR----- 181
KTDL V E+ K FA+ L F+ETSALD+TNVE AF +L +I+ V K+
Sbjct: 125 KTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQKQRSS 184
Query: 182 ---AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
V S AST P + E R CC
Sbjct: 185 QSNTVSLASESPASTAPVQAE------------RRPCC 210
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 161/217 (74%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA DE+ DYLFK VLIGDSGVGKSNL+SRF K+EF L+SK TIGVEFA R++++ +K
Sbjct: 1 MAADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQER+RAITS+YYRGA+G +LVYD+TR TF NV +WL ELRE + +++
Sbjct: 61 LIKAQIWDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
V+L+ NK+DL V E+G+ FAE E L FMETSAL NVE AF E++T+I+ I+S+
Sbjct: 121 VVLVANKSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQ 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+++E NG + G+ I V D+ + K+ CCS
Sbjct: 181 KSLETKMNGPTTLSVPIGKEIQVADEVTATKQANCCS 217
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/181 (61%), Positives = 144/181 (79%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E +YLFK+V+IGDS VGKSNLLSR+ +NEF+L SK+TIGVEF T+ + ID K VKAQI
Sbjct: 3 EEGEEYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RA+TSAYYRGA GALLVYD++R +TF+++ RWL EL+ H D + ML+GN
Sbjct: 63 WDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K DL ++ VSTE+GK AE E L+FMETSALDATNV+ AF V+ +I+ VS++ + +
Sbjct: 123 KCDLENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVLHSD 182
Query: 187 S 187
S
Sbjct: 183 S 183
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/200 (57%), Positives = 153/200 (76%), Gaps = 4/200 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKAQI 66
E YD++FK+VL+GDSGVGKSNL+ RFTKNEFN +SKSTIGVEFAT++++I D+K+VKAQI
Sbjct: 4 ESYDFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYR+I S+YYRGAVGALLVYDVT +F +V WL+E+ E+ + + ++ML+GN
Sbjct: 64 WDTAGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA- 185
K DL V DG++FA + L F+ETSALDAT V+ AF +L +IYK +K+ +++
Sbjct: 124 KMDLHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQLKSQ 183
Query: 186 --GSNGTASTLPSKGETINV 203
G A T P G+TI++
Sbjct: 184 GGGGKAPAKTGPKAGQTISL 203
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 160/222 (72%), Gaps = 10/222 (4%)
Query: 3 GYKPDEE-YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY+ +E DY+FK+VLIGDS VGKSNLL+R+ +NEFN SK+TIGVEF T+S+RI+ K
Sbjct: 2 GYQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGKE 61
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQ+WDTAGQER+RA+TSAYYRGA+GAL+VYD+TR TF+N+ +WL ELR + +++
Sbjct: 62 VKAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVT 121
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK DL ++ VS E+GK AE E+L+FMETSAL +TNV+ AF V+ +I+ S+R
Sbjct: 122 MLVGNKCDLTNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRR 181
Query: 182 AV-------EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
V + G L G+ + +DD++ +R CC
Sbjct: 182 IVPDDYDKDDRVPRGQKLGLNGAGDGKSPQDDAT--RRFSCC 221
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 157/213 (73%), Gaps = 2/213 (0%)
Query: 7 DEE-YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
DEE +YLFK+V+IGDS VGKSNLLSR+ +NEFN+ SK+TIGVEF T+S+ ID K VKAQ
Sbjct: 90 DEEGEEYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQ 149
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQER+RA+TSAYYRGAVGAL+VYD++R +TF +V RWL EL+ H++ + ML+G
Sbjct: 150 IWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVG 209
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DL ++ VS E+GK+ AE E L+F+ETSALD+TNV+ AF V+ +IY +S++ + +
Sbjct: 210 NKSDLENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNS 269
Query: 186 GSNGTASTLPSKGETINVKDDS-SVLKRIGCCS 217
S ++ N D + R CCS
Sbjct: 270 DSYKAELSVNRVSLVSNGADGAKQANSRYSCCS 302
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 159/219 (72%), Gaps = 11/219 (5%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+V+IGDS VGK+ +LSRF KNEF SKSTIGVEF TRS+ I+ KV+KAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIW 78
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F +V RW+ ELR H D +I++MLIGNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE--- 184
DL V ED FAE + L+F ETSAL NVE++F ++L +I++++SKR++E
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDN 198
Query: 185 --AGSNGTASTLPSKGETINVKDDSSV----LKRIGCCS 217
A ++ +TL KG I+V + + +K++ CS
Sbjct: 199 GKANADNNVATL--KGSKIDVISGAELEIAEMKKLSSCS 235
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 113/197 (57%), Positives = 146/197 (74%), Gaps = 2/197 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E DY+FK+V+IGDS VGK+ +LSRFTK+EF +SKSTIGVEF TR++ I KV+KAQIW
Sbjct: 14 ERIDYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIW 73
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+L+YD+T+ TF +V RW+ ELR H D +I++MLIGNK
Sbjct: 74 DTAGQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNK 133
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL L AV ED FAE + L+F ETSA NV++AF +L +IY V K+A+E G+
Sbjct: 134 VDLVDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKALECGN 193
Query: 188 NGT--ASTLPSKGETIN 202
+ A + KG I+
Sbjct: 194 GNSNVADAITLKGSKID 210
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 159/213 (74%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEE DYLFK VLIGDSGVGKSNLLSRF K+EF L+SK TIGVEFA R++++ +K++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD++R ++++NV +WL ELRE +++V+L+GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 127 KTDLR-HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
K DL V E+GK FAE E L FMETSAL NVE F +++T+IY + S++ + A
Sbjct: 126 KCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAA 185
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIG-CCS 217
+ L + G+ I++ D+ + K+ CCS
Sbjct: 186 KMDEKPINLLN-GKEIHIADEVTATKQSSTCCS 217
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 156/219 (71%), Gaps = 8/219 (3%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
DE DY+FK+V++GDSGVGKS LL+RF +NEF ++SK+TIGVEF T+++ +D+KVVKAQ
Sbjct: 8 SDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERY+AIT+AYYRGA GALL YD+T +F +V +WL ELR H D NIIVML+G
Sbjct: 68 IWDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-NIIVMLVG 126
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DL AV E+ K FA+Q+ L+F+ETSALD+ NVE+AF +L+QIY V K+ + A
Sbjct: 127 NKSDLSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATVGKKHIIA 186
Query: 186 GS---NGTASTLPSKGETINVKDDSS----VLKRIGCCS 217
N L +G I V + +R CCS
Sbjct: 187 EGAELNWDKVNLELEGIKIKVSSQEAECQKAKRRFDCCS 225
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/204 (57%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
Query: 6 PDEE--YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
DEE +YLFK+V+IGDS VGKSNLLSR+ +NEFN SK+TIGVEF T+S+ I+ K VK
Sbjct: 3 SDEEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R +TF++V RWL EL+ H+D + ML
Sbjct: 63 AQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK DL ++ AVS E+GKA AE + L+FMETSAL++TNV+ AF V+ IY S++ +
Sbjct: 123 VGNKCDLDNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDS 207
+ + T S+ VKDD+
Sbjct: 183 NSDMHKTELKWNSRVSL--VKDDN 204
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 159/222 (71%), Gaps = 10/222 (4%)
Query: 3 GYKPDEE-YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
GY+ +E DY+FK+VLIGDS VGKSNLL+R+ +NEFN SK+TIGVEF T+S+RI+ K
Sbjct: 2 GYQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGKE 61
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQ+WDTAGQER+RA+TSAYYRGA+GAL+VYD+TR TF+N+ +WL ELR + +++
Sbjct: 62 VKAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVVT 121
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK DL + VS E+GK AE E+L+FMETSAL +TNV+ AF V+ +I+ S+R
Sbjct: 122 MLVGNKCDLTDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSRR 181
Query: 182 AV-------EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
V + G L G+ + +DD++ +R CC
Sbjct: 182 IVPDDYDKDDRVPRGQKLGLNGAGDGKSPQDDAT--RRFSCC 221
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 155/215 (72%), Gaps = 4/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + DE+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQK 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
N T ++ + G +D KR C S
Sbjct: 182 ----QNSTRTSAITLGNAQAGQDPGPGEKRACCIS 212
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/222 (49%), Positives = 156/222 (70%), Gaps = 11/222 (4%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
P+EE +YLFK+V+IGDS VGKSNLL+RFT+NEF ++K+TIGV+F T+S+ IDNK++ AQ
Sbjct: 2 PEEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
WDTAGQER+RA+TS YYRGAVGA++VYD+T +F+NV RWL ELRE + +I++M++G
Sbjct: 62 CWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK+DL V T++ KAFAE + F+ETSAL++TNV AF +LT I+ +VS +
Sbjct: 122 NKSDLEMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSKKPVV 181
Query: 186 GSNGTASTLPSKGETINVKDDSSV-----------LKRIGCC 216
+ +P++G+ + D + K+ GCC
Sbjct: 182 VDDVQNWLVPNQGKKLTPLSDPAPQLTTTTASTHQQKKGGCC 223
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/212 (52%), Positives = 160/212 (75%), Gaps = 15/212 (7%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YD L+KLVLIGDSGVGK+N+L++FT+ EF +SK+TIGVEFA++++ +D+K +KAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAITSAYYRGAVGA+++YD+T+ TF+NV +W++EL+E+ DP++ +M++GNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
TD +H+ V+T+ A+A++ + F+ETSA D TNVE+AF +L QIYK S + V+
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK--SAKVVK--- 180
Query: 188 NGTASTLPSKGETINVKDDSSVL---KRIGCC 216
P+ T V D+ V+ K GCC
Sbjct: 181 -------PTPQPTKFVVADTDVVKPEKSSGCC 205
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 160/222 (72%), Gaps = 11/222 (4%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G+ + DYLFK+VLIGDS VGKSNLLSR+++NEF+L S++TIGVEF T+S+ I+ K V
Sbjct: 2 GHGGSDGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQER+RA+TSAYYRGAVGA++VYD+++ TF+NV RWL ELR ++D +++ M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL L VS E+ AE+E L+F+ETSALD+TNV AF V+ +I+ +VSK+
Sbjct: 122 LVGNKSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKI 181
Query: 183 VEAGS------NGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + S +GT G + +D + CCS+
Sbjct: 182 LSSDSSKAGTLSGTKKLGLENGNSSKPQDSG-----LSCCSS 218
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/222 (52%), Positives = 160/222 (72%), Gaps = 11/222 (4%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G+ + DYLFK+VLIGDS VGKSNLLSR+++NEF+L S++TIGVEF T+S+ I+ K V
Sbjct: 2 GHGGSDGDDYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGKEV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQER+RA+TSAYYRGAVGA++VYD+++ TF+NV RWL ELR ++D +++ M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLVTM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL L VS E+ AE+E L+F+ETSALD+TNV AF V+ +I+ +VSK+
Sbjct: 122 LVGNKSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSKKI 181
Query: 183 VEAGS------NGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ + S +GT G + +D + CCS+
Sbjct: 182 LSSDSSKARTLSGTKKLGLENGNSSKPQDSG-----LSCCSS 218
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 143/175 (81%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEFN +S++TIGVEF+TR++ + + VVKAQI
Sbjct: 5 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDAVVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGAL+V+D+T+H T+ V RWL+EL +H + NI+VML+GN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIVVMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
KTDL V E+ K FA+ L F+ETSALD+TNVE AF +L +I+ V ++
Sbjct: 125 KTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQQ 179
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/215 (54%), Positives = 155/215 (72%), Gaps = 4/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + DE+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQK 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
N T ++ + G +D KR C S
Sbjct: 182 ----QNSTRTSAITLGNAQAGQDPGLGEKRACCIS 212
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 154/212 (72%), Gaps = 7/212 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA DEE DYLFK VLIGDS VGKSNLLSRF+++EF L+SK TIGV+FA R++R+ +K
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF+N+ +WL ELR + P +
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
V+L+GNK+DL V E+GK AE E LYF+ETSAL+ NVE AF ++ +I++++++
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 RAV-------EAGSNGTASTLPSKGETINVKD 205
+ V + + + +P E +N+ +
Sbjct: 181 KIVLDNRLNGDGNNESNGAVVPPGKEIVNIHE 212
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 154/212 (72%), Gaps = 7/212 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA DEE DYLFK VLIGDS VGKSNLLSRF+++EF L+SK TIGV+FA R++R+ +K
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF+N+ +WL ELR + P +
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
V+L+GNK+DL V E+GK AE E LYF+ETSAL+ NVE AF ++ +I++++++
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 RAV-------EAGSNGTASTLPSKGETINVKD 205
+ V + + + +P E +N+ +
Sbjct: 181 KIVLDNRLNGDGNNESNGAVVPPGKEIVNIHE 212
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+VLIGDS VGKSNLLSRF +NEF+ SK+TIGVEF T+ + ID K +KAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF ++ RWL+EL D + ML+GNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKCDL 129
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
++ VSTE+GK+ AE+E L+FMETSALDATNV+ AF V+ +IY +S++ + + S
Sbjct: 130 ENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLNSDS 186
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 151/201 (75%), Gaps = 7/201 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+V+IGDS VGK+ +LSRF KNEF SKSTIGVEF TRS+ I+ KV+KAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIW 78
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F +V RW+ ELR H D +I++MLIGNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE--- 184
DL V ED FAE + L+F ETSAL NVE++F ++L +I++++SKR++E
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDN 198
Query: 185 --AGSNGTASTLPSKGETINV 203
A ++ +TL KG I+V
Sbjct: 199 GKANADNNVATL--KGSKIDV 217
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 153/205 (74%), Gaps = 9/205 (4%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR- 181
L+GNK+DL+ V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQR 181
Query: 182 -------AVEAGSNGTASTLPSKGE 199
A+ GS A P GE
Sbjct: 182 QNSSRTNAITLGS-AQAGQEPGPGE 205
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 149/211 (70%), Gaps = 4/211 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYD+LFK+VLIGDSGVGK+N+L RF N+F LESK TIGVEFAT++L+ K VK QI
Sbjct: 6 DEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGAVGA + YDVTR TF+N +WL EL+EH D NI++++IGN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMIGN 125
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV-SKRAVEA 185
KTD AV T++ F EQ+ + F+ETSALD TN++ AF +++ I+ + SK A +
Sbjct: 126 KTDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSKTAKKV 185
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
T + S+ +T K S GCC
Sbjct: 186 VQVETDPVVLSEQKTPQSKSKKS---SEGCC 213
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 155/214 (72%), Gaps = 5/214 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + DE+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNRTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
N T ++ + G +D KR CC
Sbjct: 182 ----QNSTRTSAITLGSAQAGQDPGPGEKR-ACC 210
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 158/227 (69%), Gaps = 10/227 (4%)
Query: 1 MAGYKPD---EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI 57
MA ++ D E DY+FK+V+IGDSGVGKS LL+RF +NEF+L+SK+TIGVEF T+++ +
Sbjct: 1 MAQFQGDLDHEGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLM 60
Query: 58 DNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDP 117
D+K+VKAQIWDTAGQERY+AIT+AYYRGA GALL YD+T+ TF ++ +WL EL H D
Sbjct: 61 DHKLVKAQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADK 120
Query: 118 NIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKI 177
NI+VML+GNK+DL + V E+ + A+Q+ +F+ETSALD+ NVE AF +L+QIY
Sbjct: 121 NIVVMLVGNKSDLSSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVT 180
Query: 178 VSKRAVEAGS---NGTASTLPSKGETINVKDDSSVL----KRIGCCS 217
+SK+ + A N L +G + V KR CCS
Sbjct: 181 MSKKHITADGRERNWDKVNLEFEGTKLLVSSQEPECQKSKKRFSCCS 227
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 158/215 (73%), Gaps = 4/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +++Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +
Sbjct: 2 GNGKEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V T++ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
N T + + G+T +D SS K+ C S
Sbjct: 182 ----QNSTRTNTITLGDTQPGQDPSSGEKKACCIS 212
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 156/215 (72%), Gaps = 4/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +
Sbjct: 2 GNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLHQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQR 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
N T + + G ++ + KR C S
Sbjct: 182 ----QNSTRTNAIALGSAQAGQEPGAGQKRACCIS 212
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 156/215 (72%), Gaps = 4/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I++ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQR 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
N T + + G ++ S KR C S
Sbjct: 182 ----QNSTRTNAITLGSAQGGQEPGSGEKRACCIS 212
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 144/179 (80%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEFN +S++TIGVEF+TR++ + V
Sbjct: 2 GNRKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V T++ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G DE+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGKDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQR 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
N T + + G +D KR CC N
Sbjct: 182 ----QNSTRANAITLGNAEAGQDSGPGEKR-ACCIN 212
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 144/183 (78%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA DEE DYLFK VLIGDS VGKSNLLSRF+++EF L+SK TIGV+FA R++R+ +K
Sbjct: 1 MAEESYDEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF+N+ +WL ELR + P +
Sbjct: 61 TIKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
V+L+GNK+DL V E+GK AE E LYF+ETSAL+ NVE AF ++ +I++++++
Sbjct: 121 VVLVGNKSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQ 180
Query: 181 RAV 183
+ V
Sbjct: 181 KIV 183
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 156/215 (72%), Gaps = 4/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I++ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQR 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
N T + + G ++ S KR C S
Sbjct: 182 ----QNSTRTNAITLGGAQGGQEPGSGEKRACCIS 212
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 144/179 (80%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL H V T++ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/207 (55%), Positives = 151/207 (72%), Gaps = 1/207 (0%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+VLIGDS VGKSNLL+RF +NEF+ SK+TIGVEF T+ + I+ K +KAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR ++F +V RWL EL H D ML+GNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDL 131
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT 190
++ VS E+GK AE+ESL+FMETSALD+TNVE AF V+ +IY +S++ + + S
Sbjct: 132 ENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLNSDSYKA 191
Query: 191 ASTLPSKGETINVKDDSSVLKRIGCCS 217
T+ ++ + +SS CC+
Sbjct: 192 ELTV-NRVSLVKNNANSSKQSSFSCCA 217
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 139/167 (83%), Gaps = 2/167 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+ Y++++K+VLIG+SGVGKSNLLSRFTKNEFN +S++TIGVEF+TR+++++ VKAQI
Sbjct: 4 DDSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+++H T+++ RWL+EL EH DP+I+VML+GN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQES--LYFMETSALDATNVENAFTEVL 171
K DL +L V +E G E+ L FMETSALD+TNVE AF EVL
Sbjct: 124 KRDLENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/220 (53%), Positives = 158/220 (71%), Gaps = 21/220 (9%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAG E+ DY+FK+VLIGDS VGKS +L+RF +NEF+++SK+TIGVEF TR+L ID+K
Sbjct: 1 MAG---GEKVDYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK 57
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
YRA+TSAYYRGA+GALLVYD+T+ +F ++ RWL ELR H D NI+
Sbjct: 58 --------------YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIV 103
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DL AVSTED K FAE+E+L+F+ETSAL ATNVENAF VL++I+KI SK
Sbjct: 104 IMLVGNKSDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSK 163
Query: 181 R--AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ A + +NG A +L G+ + V + + + CCS+
Sbjct: 164 KNMAADPKANGAAPSL--AGKKVVVPGPAQEIPKSKCCSS 201
>gi|1370158|emb|CAA98185.1| RAB11I [Lotus japonicus]
Length = 163
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 140/166 (84%), Gaps = 4/166 (2%)
Query: 52 TRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLREL 111
TRS+RI +K VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR TF+NV RWL+EL
Sbjct: 1 TRSVRIHDKTVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKEL 60
Query: 112 REHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVL 171
R+HTD NI++ML+GNK DLRHL AV TE+ AFAE+E+ YFMETSAL++ NV+NAF EVL
Sbjct: 61 RDHTDANIVIMLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVL 120
Query: 172 TQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++IY +VS++ +E G++ A LP +G+TIN+ D S+V K+ GCCS
Sbjct: 121 SEIYNVVSRKTLEKGNDPGA--LP-QGQTINLGDVSAV-KKPGCCS 162
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 156/215 (72%), Gaps = 4/215 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +++Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGTEDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
N + S+ + G ++ S KR C S
Sbjct: 182 ----QNSSRSSAITLGSAQAGQEPGSGEKRTCCIS 212
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 144/179 (80%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +
Sbjct: 2 GNRTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 151/205 (73%), Gaps = 9/205 (4%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 6 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 65
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 66 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 125
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR- 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 126 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 185
Query: 182 -------AVEAGSNGTASTLPSKGE 199
A+ GS A P GE
Sbjct: 186 QNSIRTNAITLGS-AQAGQEPGPGE 209
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 144/179 (80%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +
Sbjct: 2 GNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 144/179 (80%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +
Sbjct: 2 GNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 151/205 (73%), Gaps = 9/205 (4%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR- 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 182 -------AVEAGSNGTASTLPSKGE 199
A+ GS A P GE
Sbjct: 182 QNSIRTNAITLGS-AQAGQEPGPGE 205
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ- 180
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
N S + G ++ KR CC N
Sbjct: 181 ---NQNSPRSNAIALGSAQAGQEPGPGQKR-ACCIN 212
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/221 (48%), Positives = 154/221 (69%), Gaps = 11/221 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EE +YLFK+V+IGDS VGKSNLL+RFT+NEF ++K+TIGV+F T+S+ IDNK + AQ
Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQC 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RA+TS YYRGAVGA++VYD+T +F+NV RWL ELRE + +I++M++GN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL V T++ +AFAE + F+ETSAL++TNV +F +LT IY +VS +
Sbjct: 124 KSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVV 183
Query: 187 SNGTASTLPSKGETINVKDDSSVL-----------KRIGCC 216
+ +P++G+ + D + K+ GCC
Sbjct: 184 DDTQNWLVPNQGKKLTPLSDPAPQLTANTTSTHQEKKSGCC 224
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 144/179 (80%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +
Sbjct: 2 GNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVSKQ 180
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 144/179 (80%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNRSEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V T++ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQI 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
N S + G ++ KR CC N
Sbjct: 182 ----QNSPRSNAIALGSAQAGQEPGPGQKR-ACCIN 212
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 143/179 (79%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/139 (75%), Positives = 126/139 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+N+FNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++M N
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMPADN 124
Query: 127 KTDLRHLVAVSTEDGKAFA 145
K+DLRHL AV T++ +AFA
Sbjct: 125 KSDLRHLRAVPTDEARAFA 143
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 151/205 (73%), Gaps = 9/205 (4%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGNEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR- 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 181
Query: 182 -------AVEAGSNGTASTLPSKGE 199
A+ GS A P GE
Sbjct: 182 QNSTRTNAITLGS-AQAGQEPGPGE 205
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 143/179 (79%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +
Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/179 (60%), Positives = 143/179 (79%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/176 (61%), Positives = 138/176 (78%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAG 71
YLFK+VLIGDS VGKSNLLSRF +NEF+ SK+TIGVEF T+ + ID K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
QER+RA+TSAYYRGA GAL+VYD++R TF+++ RWL EL D + ML+GNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 132 HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
++ VS E+GKA AE+E L+FMETSALD+TNV+ AF V+ +IY +S++ + + S
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSDS 187
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/167 (64%), Positives = 134/167 (80%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
P D + + IG L SRFT+NEFNL+SKSTIGVEFATRS+++D+K +KAQ
Sbjct: 12 PPLPLDIAAQSLTIGALPPVTVPLQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 71
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+G
Sbjct: 72 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 131
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
NK+DLRHL AV T++ K+FA + L F+ETSALDA+NVE AF +LT
Sbjct: 132 NKSDLRHLRAVPTDEAKSFASENHLSFIETSALDASNVELAFQNILT 178
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 137/177 (77%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
+YLFK+VLIGDS VGKSNLLSRF +NEF+ SK+TIGVEF T+ + ID K VKAQIWDTA
Sbjct: 11 EYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TF + RWL EL H D + ML+GNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRMLVGNKCDL 130
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
++ VS E+GK AE+E L+FMETSALD+TNV AF V+ +IY VS++ + + S
Sbjct: 131 ENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKVLNSDS 187
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 150/211 (71%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
P +E +LFK+VLIGDS VGKSN+LSRFTK +FN +S+ TIGVEFATRSL + K+++AQ
Sbjct: 5 PQQEEKHLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDT GQERY++ITSAYYRGAVGA+L+YD+T+ TF+N+ +W++EL+E+ + N++ MLIG
Sbjct: 65 IWDTCGQERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIG 124
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK DL+ V ++ FAE ++ FME SA D TNV+ AF+ ++ +IY++++K+++
Sbjct: 125 NKADLKAQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQSLAE 184
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ + + ++ + CC
Sbjct: 185 NQDQSIQQQMQSRNNMQIQQSQCNQSQDTCC 215
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/202 (54%), Positives = 145/202 (71%), Gaps = 29/202 (14%)
Query: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQER 74
++VLIGDSGVGKSNLLSRFT+NEFNL+SKSTIGVEFATRS+++D+K +K+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 75 YRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLV 134
YRAITSAYYRGAVGALLVYD+++H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLR 150
Query: 135 AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTL 194
AV TE+ K FA +I++IVS +A+++G +A
Sbjct: 151 AVPTEEAKQFA---------------------------KIFRIVSSKALDSGD--SAQNP 181
Query: 195 PSKGETINVKDDSSVLKRIGCC 216
S + + + + GCC
Sbjct: 182 LSDRKVVEITKTQDPESKQGCC 203
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/173 (60%), Positives = 143/173 (82%), Gaps = 2/173 (1%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
EY YLFK+VLIG+ GVGKSNLLSRFT+NEFNL+SK TIGVEFAT+ + ++ K VK QIWD
Sbjct: 4 EYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWD 63
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAG ER+R S+YYRGA+GALLVYD+++H T+++V +WL+ LR+H + +I++ L+GNK+
Sbjct: 64 TAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKS 123
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
DL H AV T++ K +AE+ + F+ETSALD TNVE AFT ++T+IYK+VS++
Sbjct: 124 DLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 150/206 (72%), Gaps = 2/206 (0%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAG 71
YLFK+V+IGDS VGKSNLLSRF +NEF+ SK+TIGVEF T+ + ID K +KAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
QER+RA+TSAYYRGAVGAL+VYD+TR +F +V RWL EL H D I ML+GNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 132 HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTA 191
+ VS ++GK+ AE+ESL+FMETSALD+TNVE AF V+ +IY +S++ + S+
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKIL--NSDSYK 191
Query: 192 STLPSKGETINVKDDSSVLKRIGCCS 217
+ L + ++ D SS CC+
Sbjct: 192 AELTANRVSLVNGDTSSKKYGFSCCN 217
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 143/179 (79%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
L+GNK+DL V T++ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 142/177 (80%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKA
Sbjct: 17 RGSEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 76
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+
Sbjct: 77 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 136
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
GNK+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 137 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 115/214 (53%), Positives = 155/214 (72%), Gaps = 5/214 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + V
Sbjct: 2 GNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V T++ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 122 LVGNKSDLSQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSKQR 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ S A TL + + ++R CC
Sbjct: 182 -QNNSRANAVTLSNA----QPGQELGSVERKACC 210
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 141/174 (81%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIW
Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 124
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
+DL V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 125 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 104/172 (60%), Positives = 141/172 (81%), Gaps = 1/172 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKAQI 66
E YDYLFK+VLIGD+GVGKSNLL R+TKN+F + S+STIGVEFATR+L++ D+ VKAQI
Sbjct: 10 ENYDYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYR AVGAL+VYD+++ +F+N+ +W++ELR+H D NI + LIGN
Sbjct: 70 WDTAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGN 129
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV 178
K+DL+HL AV ED + A+ + F+ETSAL++ NV+ AF ++ +IY++
Sbjct: 130 KSDLKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRLT 181
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 154/224 (68%), Gaps = 12/224 (5%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQ 65
+ E DY+FK+V++GDS VGK+ LL RFTK+EF L+SKSTIGVEF TR+L + K VKAQ
Sbjct: 23 KEAEIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQ 82
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRA+TSAYYRGA+GA++VYD+TR TF+NV RW+ ELR H D + +V LIG
Sbjct: 83 IWDTAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIG 142
Query: 126 NKTDL-RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
NK D+ V+ ++ FAE++ L+F E SAL NVE AF +L +I+ +VS+RA+E
Sbjct: 143 NKADMPASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRALE 202
Query: 185 ---------AGSNGTASTLPSKGETINVKD--DSSVLKRIGCCS 217
G+ L KG T++V ++S +K+ CS
Sbjct: 203 LDEARRMRNGGAGAGGEVLSLKGTTLDVGSIMETSAMKKSSQCS 246
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 136/177 (76%), Gaps = 25/177 (14%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK ESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFK-------------------------ESKSTIGVEFATRSIQVDGKTIKAQI 39
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 40 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 99
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSA+D+TNVE AF +LT+IY+IVS++ +
Sbjct: 100 KSDLRHLRAVPTDEARAFAEKNNLSFIETSAMDSTNVEEAFKNILTEIYRIVSQKQI 156
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 145/191 (75%), Gaps = 2/191 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKAQ 65
D+ YDYL+K+VLIGDS VGKSNLL+R+TKNEFNLESKSTIGVEFAT + + N KV K Q
Sbjct: 4 DDSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKVQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGAVGAL+ YD+T ++F+NV RWL+ELR++ P+ ++ L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLVG 123
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
NK D+ +L V+ ++G A E++ F+E SALD+TNV AF E++ IY +K
Sbjct: 124 NKVDMVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIYTTQAKTTNYE 183
Query: 186 GSNGTASTLPS 196
G + T+ LP+
Sbjct: 184 GMD-TSQQLPT 193
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 154/220 (70%), Gaps = 10/220 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+E+ DYLFK+V+IGDS VGKSNLL+RFT+NEF ++K+TIGV+F T+S+ I+NKV+ AQ
Sbjct: 4 EEDNDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQC 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RA+TS YYRGAVGA++VYD+T +F+NV RWL ELRE DP+I++M++GN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DL VST++ ++FA+ + F+ETSAL+++NV AF +LT IY ++
Sbjct: 124 KSDLDSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKKQVVM 183
Query: 187 SNGTASTLP--SKGETINVKDDSSVL--------KRIGCC 216
+G P S G I ++ V K+ GCC
Sbjct: 184 DDGQEWLKPSTSSGHKITPLAETPVSSTTSTHQEKKKGCC 223
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/222 (52%), Positives = 154/222 (69%), Gaps = 15/222 (6%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
E DY+FK+V++GDS VGK+ LL RFTK+EF L+SKSTIGVEF TR+L + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRA+TSAYYRGA+GA++VYD+TR TF+NV RW+ ELR H D + +V LIGNK
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 129 DL---RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
D+ R VA ++ FAE++ L+F E SAL NV+ AF +L +I+ +VS+RA+E
Sbjct: 138 DMPAGRREVA--ADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALEL 195
Query: 186 --------GSNGTASTLPSKGETINVKD--DSSVLKRIGCCS 217
G G L KG T++V ++S +K+ CS
Sbjct: 196 DEARRMRDGGAGGGEVLSLKGTTLDVGSIMETSAMKKSSQCS 237
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 145/211 (68%), Gaps = 4/211 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DE+YDYLFK+VLIGDSGVGK+N+L RF NEF LESK TIGVEFAT++ + K VK QI
Sbjct: 6 DEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RAIT+AYYRGAVGA + YD+TR TF+N +WL EL+EH D NI++++IGN
Sbjct: 66 WDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMIGN 125
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV-SKRAVEA 185
K D AV T++ + + E + + F+ETSALD TN++ AF +++ I+ + SK +
Sbjct: 126 KIDAVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSKNIKKV 185
Query: 186 GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
T L K + V S R GCC
Sbjct: 186 VQMATEQVLLEKPK---VTQSKSKKNREGCC 213
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/134 (76%), Positives = 122/134 (91%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAG 71
+ F +VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
QERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GNK+DLR
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 132 HLVAVSTEDGKAFA 145
HL AV T++ KAFA
Sbjct: 121 HLRAVPTDEAKAFA 134
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 135/172 (78%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAG 71
YLFK+VLIGDS VGKSNLLSRF +NEF+ SK+TIGVE T+ + ID K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
QER+RA+TSAYYRGA GAL+VYD++R TF+++ RWL EL D + ML+GNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 132 HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
++ VS E+GKA AE+E L+FMETSALD+TNV+ AF V+ +IY +S++ +
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVL 183
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 158/217 (72%), Gaps = 7/217 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+V+IGDS VGK+ +LSRF KNEF +SK+TIGVEF TR++ I+ KV+KAQIW
Sbjct: 22 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIW 81
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F +V RW+ ELR H D +I++MLIGNK
Sbjct: 82 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNK 141
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI-YKIVSKRAVEAG 186
DL V +ED FAE++ L+F ETSAL NVE+AF ++L +I ++VSKR++
Sbjct: 142 GDLVDQRVVLSEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSLSDC 201
Query: 187 SNGTASTLPS--KGETINVKDDSSV----LKRIGCCS 217
++G + + KG I+V + +K++ CS
Sbjct: 202 NHGKKTNGGNSLKGSKIDVISGPELEITEVKKVPSCS 238
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 153/219 (69%), Gaps = 18/219 (8%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKA 64
D+ YDYLFK+VLIGDS VGKSNLL RF K F L+SKSTIGVEFAT+++ ++N K+ KA
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ ++F +V +WL EL ++ D NI + L+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL HL V+ EDG+AFA + L F ETS L++ NV+ AF E+L++I E
Sbjct: 123 GNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSRIS--------E 174
Query: 185 AGSNGTASTLPSKGETINVKDDSSVL-------KRIGCC 216
+ +ST P G T+ ++ VL K+I CC
Sbjct: 175 KHTRFDSSTFPVSGSTM--PKNTIVLGVKAMRKKKISCC 211
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 109/191 (57%), Positives = 145/191 (75%), Gaps = 2/191 (1%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKA 64
D+ YDYLFK+VLIGDS VGKSNLL RF K F L+SKSTIGVEFAT+++ ++N K+ KA
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ A+F +V +WL EL ++ D NI + L+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL HL V+ EDG+AFA + L F ETS L++ NV+ AF E+L++I + R +
Sbjct: 123 GNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKISD-KNTRFDD 181
Query: 185 AGSNGTASTLP 195
G++ T + +P
Sbjct: 182 GGASLTDAQMP 192
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/222 (48%), Positives = 156/222 (70%), Gaps = 7/222 (3%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M + ++ YD+LFK+VLIGDSGVGKS L+SRFTK++F++E + TIGVEF+T++++I +K
Sbjct: 1 MQRNQEEDVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQERYRAITSAYYRGA GAL+V+D+T+ +F+N+ +W +EL+EH+D I+
Sbjct: 61 IIKAQIWDTAGQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY----- 175
MLIGNK DL +S + FA++ + ++ETSAL +TNVE AF +++ IY
Sbjct: 121 TMLIGNKCDLADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIYDSTIS 180
Query: 176 -KIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
K + G N +L +K + + K +S K+ CC
Sbjct: 181 GNTQRKSIAKFGKNIQTLSLENKLKNKDQKQESEDNKK-SCC 221
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 145/202 (71%), Gaps = 1/202 (0%)
Query: 17 VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYR 76
VL GDSGVGKSNLLSRF+KNEF +S+ TIGVEFA R++++ +K+VK QIWDTAGQER+R
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAV 136
AITS+YYRGA+GALLVYD+TR ATF N+ +WLRELRE +P ++++L+GNK DL V
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 137 STEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSN-GTASTLP 195
E+ + AE E+L+FMETSA D NVE AF E++ +I+ I S++ ++ P
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180
Query: 196 SKGETINVKDDSSVLKRIGCCS 217
+ E I++ + + CCS
Sbjct: 181 NGKEIISIHEVTPTKPNSNCCS 202
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/219 (50%), Positives = 157/219 (71%), Gaps = 9/219 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+EE DYLFK+V+IGDS VGKSNLL+RFT+NEF ++K+TIGV+F T+S+ I+ KV+ AQ
Sbjct: 3 EEENDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQC 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQER+RA+TS YYRGA+GA++VYD+T +F+NV RWL ELRE +P+I+VM++GN
Sbjct: 63 WDTAGQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY-KIVSKRAVEA 185
K+DL VST + ++FAE + F+ETSAL++TNV +F ++LT IY + K+A
Sbjct: 123 KSDLESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQVV 182
Query: 186 GSNGTASTLPSK-GETINVKDDSSV-------LKRIGCC 216
+G P++ G+ I +++ V + GCC
Sbjct: 183 MDDGQEWLKPTQSGQKITPLNEAPVNVTSTHQEPKKGCC 221
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/205 (55%), Positives = 145/205 (70%), Gaps = 13/205 (6%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
E DY+FK+V++GDS VGK+ LL RFTK+EF L+SKSTIGVEF TR+L + K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRA+TSAYYRGA+GA++VYD+TR TF+NV RW+ ELR H D + +V LIGNK
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 129 DL---RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
D+ R VA ++ FAE++ L+F E SAL NV+ AF +L +I+ +VS+RA+E
Sbjct: 138 DMPAGRREVA--ADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALEL 195
Query: 186 --------GSNGTASTLPSKGETIN 202
G G L KG T+N
Sbjct: 196 DEARRMRDGGAGGVQVLSLKGTTLN 220
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKA 64
D+ YDYLFK+VLIGDS VGKSNLL RF K F L+SKSTIGVEFAT+++ ++N K+ KA
Sbjct: 3 ADQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ +F NV +WL EL ++ D NI + L+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLV 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
GNK+DL HL V+ EDG+AFA + L F ETS L++ NV+ AF E+L++I
Sbjct: 123 GNKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 157/217 (72%), Gaps = 7/217 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+V+IGDS VGK+ +LSRF KNEF +SK+TIGVEF TR++ I+ KV+KAQIW
Sbjct: 22 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIW 81
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F +V RW+ ELR H D +I++MLIGNK
Sbjct: 82 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNK 141
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI-YKIVSKRAVEAG 186
D V +ED FAE++ L+F ETSAL NVE+AF ++L +I ++VSKR++
Sbjct: 142 GDFVDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSLSDC 201
Query: 187 SNGTASTLPS--KGETINVKDDSSV----LKRIGCCS 217
++G + + KG I+V + +K++ CS
Sbjct: 202 NHGKKTNGGNSLKGSKIDVISGPELEITEVKKVPSCS 238
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 153/213 (71%), Gaps = 8/213 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYD+L+K+VL+G+SGVGKSNLL RFT+NEF+ + +STIGVEFATRS+ K ++AQI
Sbjct: 6 EDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNIRAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGA+GAL+VYD+T+ ++F++V RWL EL E+ D ++ M+IGN
Sbjct: 66 WDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQMIIGN 125
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE-- 184
K+DL V+TE+GK AE +F ETSALD NVE+AF +L +IY +K V+
Sbjct: 126 KSDLNQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIYDESAKVVVDEV 185
Query: 185 -AGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ TA T+ + ++ + K+ CC
Sbjct: 186 KTEAKPTADTV-----VLTHEEPKATEKQQKCC 213
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 143/179 (79%), Gaps = 1/179 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKAQ 65
D+ YDYLFKLV++GDSGVGKSNLL R+TKNEFN+ S T+G+EFAT++++ N++++AQ
Sbjct: 2 DDNYDYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDT GQERYR++TSAYYRGAVGAL+VYDVT +F NV WL+ELR+ + NI+V+L+G
Sbjct: 62 IWDTCGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVG 121
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
NK DL+ V ED FA+++ + F+ETSAL+ +NV+ AF ++ +I+++V++++ +
Sbjct: 122 NKIDLKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQSTQ 180
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 140/178 (78%), Gaps = 2/178 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M+ +P+E YDYLF VLIGD+GVGK+N+L+R+ KNEF ++KST+GVEFA++ + IDNK
Sbjct: 1 MSTAEPEERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNK 58
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T +TF N+G WL EL ++D ++
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMT 118
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV 178
++L+GNK DL +L + +++ FAEQ ++ F+ETSA D+T ++ AF +L+ IY +
Sbjct: 119 IVLVGNKCDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCI 176
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 150/214 (70%), Gaps = 2/214 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+YDYLFK++ GDS VGKSN++SR T+N F+ + K T+GVEF +++ K +
Sbjct: 2 GRRCNEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
AQIWDT G ERY + T + YRG GA+LVYD+TR TF+NVG+WL+ELR+H + N ++M
Sbjct: 62 AAQIWDTCGLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
LIGNK+DL+HL +VSTED + FAE+E L FMETSA +TNV+ A +L +I+++ S++
Sbjct: 122 LIGNKSDLQHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEKE 181
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ + + ST K T K ++ +R GCC
Sbjct: 182 LHSEESNGVSTQDGK-PTFGAKTRTNT-QRTGCC 213
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 1/169 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKAQ 65
+ YDYLFK+VLIGDS VGKSNLL RF K F L+SKSTIGVEFAT+++ + N K KAQ
Sbjct: 4 EHNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL E+ DPN+I+ L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVG 123
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
NK+DL HL VS+EDG+ +A +L F ETS L+ N++ AFTE+L+ I
Sbjct: 124 NKSDLTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSI 172
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 152/209 (72%), Gaps = 2/209 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EEYD+L+K+VL+G+SGVGKSNLL RFT+NEF+ + +STIGVEFATRS+ +K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +F++V +WL EL E+ D ++ M+IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL V T +G+ A++ + +F ETSALD +NVE AF +L +IY SK +V+
Sbjct: 125 CDLSQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK-SVDGEQ 183
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ T P+ E I++ ++ + CC
Sbjct: 184 SNTNEIKPAT-EPIDLGSQNNKPEEKKCC 211
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 152/209 (72%), Gaps = 2/209 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EEYD+L+K+VL+G+SGVGKSNLL RFT+NEF+ + +STIGVEFATRS+ +K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +F++V +WL EL E+ D ++ M+IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL V T +G+ A++ + +F ETSALD +NVE AF +L +IY SK +V+
Sbjct: 125 CDLSQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSK-SVDGEQ 183
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ T P+ E I++ ++ + CC
Sbjct: 184 SNTNEIKPAT-EPIDLGSQNNKPEEKKCC 211
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 149/209 (71%), Gaps = 2/209 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EEYD+L+K+VL+G+SGVGKSNLL RFT+NEF+ + +STIGVEFATRS+ +K ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +F++V +WL EL E+ D ++ M+IGNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL V T +G+ A++ + +F ETSALD +NVE AF +L +IY SK G
Sbjct: 125 CDLNQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKSV--DGE 182
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
+ + + E I++ ++ + CC
Sbjct: 183 QSSNNEIKPATEPIDLGSQNNKPEEKKCC 211
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 157/222 (70%), Gaps = 12/222 (5%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EE DY+FK+V+IGDS VGK+ LL RFTK+EF ++SKSTIG+EF TR++ I K VKAQIW
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYDVT +F + RWL +LR H D +I+VMLIGNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNK 121
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--EA 185
DL H AV+ ++ AFAE + L+F E SAL NVE AF +L +I+ IVS+R++
Sbjct: 122 ADLSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMD 181
Query: 186 GSNG-----TASTLPSKGETINVKDDSSVL-----KRIGCCS 217
G NG + L +G +++ D+ S++ KR+ CS
Sbjct: 182 GINGDAAANANAALMLRGTKLSLSDELSIMETSAIKRVSRCS 223
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 145/189 (76%), Gaps = 6/189 (3%)
Query: 32 RFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKAQIWDTAGQERYRAITSAYYRGAVGAL 90
RFT++EFNLESKSTIGVEFAT+S+++ N K++KAQIWDTAGQERYRAITSAYYRGAVGAL
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 91 LVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESL 150
LVYD+T+ TF+N+ +WL+ELR++ D NI+++L+GNK+DL+HL ++ D FA++E L
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 151 YFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSS-- 208
F+ETSAL+ATNVE AF ++L +IY + K+ +A + + +G+ INV DD+
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKK--QATKSEDNVNIQPRGKKINVDDDNDEN 193
Query: 209 -VLKRIGCC 216
+ CC
Sbjct: 194 EKKPKTKCC 202
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 157/234 (67%), Gaps = 18/234 (7%)
Query: 2 AGYKPDEE--YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
AG++ ++E DY+FK+V++GDS VGK+ LL RF K+EF L+SKSTIGVEF TR+L +
Sbjct: 12 AGWEGEKEGEIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHR 71
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K VKAQIWDTAGQERYRA+TSAYYRGA+GA++VYDVTR ATF +V RW+ ELR H D +
Sbjct: 72 KRVKAQIWDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGST 131
Query: 120 IVMLIGNKTDLR-HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV 178
+V L+GNK D H V ++ FAE++ L+F E SAL NVE AF +L +++ +V
Sbjct: 132 VVALVGNKADAPAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVV 191
Query: 179 SKRAVEA----------GSNGTASTLPSKGETINVKD---DSSVLKRIGC--CS 217
S+RA+E G L +G T+++ D ++S +K+ CS
Sbjct: 192 SRRALELDEARRTRNGDGDGDRGQALSLRGTTVDLHDPIMETSAMKKTASSQCS 245
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/170 (62%), Positives = 134/170 (78%), Gaps = 1/170 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKA 64
D YDYLFK+VLIGDS VGKSNLL RF K F L+SKSTIGVEFAT+++++ N K+ KA
Sbjct: 3 ADHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA GA++VYD+ +FQ+V RWL EL E+ D N++++L
Sbjct: 63 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLA 122
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
GNK+DL +L VSTED + FA+ +L F ETS L++ NVE AFTE+L+ I
Sbjct: 123 GNKSDLVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAI 172
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/148 (68%), Positives = 125/148 (84%), Gaps = 1/148 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
DEEYDYLFK+VL+GDSGVGKSNLLSRFT+N F+LE+KSTIGVEFATRS+ I+ K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTD-PNIIVMLIG 125
WDTAGQERYRAIT AYYRGA+G L+VYD+ +H TFQN+ +WL+ELR H D NI +ML+G
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFM 153
NKTDLRHL AV T++ +A++ + F+
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFI 153
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 136/178 (76%), Gaps = 4/178 (2%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+V+IGDSGVGK+ LL RFT++EF L+SKSTIG+EF TR++ + K VKAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGA+GA+LVYDVTR +F++ RW+ ELR H D +I+V+LIGNK DL
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADL 131
Query: 131 RHLV----AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
AV E+ AFAE++ L+F E SAL NVE AF +L +I+ VS+R +E
Sbjct: 132 AVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPLE 189
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 154/219 (70%), Gaps = 6/219 (2%)
Query: 5 KP--DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
KP E+ DY+FK+V+IGDS VGK+ LLSRFT NEF +SKSTIGVEF TR++ + K+V
Sbjct: 18 KPTMPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLV 77
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F +V RW+ ELR H D + ++M
Sbjct: 78 KAQIWDTAGQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIM 137
Query: 123 LIGNKTDLR-HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK--IVS 179
L+GNK DL AV TED FAE + L+F E SAL NV+ AF +L +I+ +VS
Sbjct: 138 LVGNKADLSVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVS 197
Query: 180 KRAVEAGSNGTASTLPSKGETINVKD-DSSVLKRIGCCS 217
++A+E+ T S+ + I+ D ++S +K CS
Sbjct: 198 RKAMESDGGATVKLDGSRIDVISGSDLETSNIKEQASCS 236
>gi|242006346|ref|XP_002424012.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507304|gb|EEB11274.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 130
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 114/121 (94%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 K 127
K
Sbjct: 125 K 125
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 151/214 (70%), Gaps = 4/214 (1%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+ DY+FK+V+IGDS VGK+ LLSRFT+NEF +SKSTIGVEF TR++ + K+VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIW 82
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA++VYD+T+ +F +V RW+ ELR H D + ++ML+GNK
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNK 142
Query: 128 TDLR-HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK--IVSKRAVE 184
DL AV TED FAE + L+F E SAL NV+ AF +L +I+ +VS++A+E
Sbjct: 143 ADLAVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAME 202
Query: 185 AGSNGTASTLPSKGETINVKD-DSSVLKRIGCCS 217
+ S+ + I+ D + S +K CS
Sbjct: 203 SDGGAPVKLDGSRIDVISGSDLEISKIKEQASCS 236
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 143/187 (76%), Gaps = 16/187 (8%)
Query: 9 EYDYLFK--------------LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRS 54
EY YLFK +VLIG+ GVGKSNLLSRFT+NEFNL+SK TIGVEFAT+
Sbjct: 4 EYYYLFKSNFIFQNFKRQIISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKI 63
Query: 55 LRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREH 114
+ ++ K VK QIWDTAG ER+R S+YYRGA+GALLVYD+++H T+++V +WL+ LR+H
Sbjct: 64 ISVEGKAVKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDH 123
Query: 115 TDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
+ +I++ L+GNK+DL H AV T++ K +AE+ + F+ETSALD TNVE AFT ++T+I
Sbjct: 124 ANEDIVITLVGNKSDLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEI 181
Query: 175 YKIVSKR 181
YK+VS++
Sbjct: 182 YKLVSEK 188
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/203 (55%), Positives = 145/203 (71%), Gaps = 4/203 (1%)
Query: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQER 74
++VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIWDTAG ER
Sbjct: 36 RVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 95
Query: 75 YRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLV 134
YRAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL
Sbjct: 96 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 155
Query: 135 AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTL 194
V TE+ FAE L F+ETSALD+TNVE AF VL +I+ VSK+ N T ++
Sbjct: 156 EVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQK----QNSTRTSA 211
Query: 195 PSKGETINVKDDSSVLKRIGCCS 217
+ G +D KR C S
Sbjct: 212 ITLGNAQAGQDPGPGEKRACCIS 234
>gi|328872576|gb|EGG20943.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 238
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 118/216 (54%), Positives = 150/216 (69%), Gaps = 23/216 (10%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M+ EEYDYLF T+NEFNLE+KSTIGVEFATRS+ + K
Sbjct: 1 MSRLTGQEEYDYLF-------------------TRNEFNLETKSTIGVEFATRSIETEGK 41
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ + AT+++V RWL ELRE+ D NI
Sbjct: 42 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIE 101
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL VST++ K FAE+ L F+ETSALD++NVE AF +LTQI +++
Sbjct: 102 IMLVGNKNDLRHLREVSTDEAKDFAEKHKLSFIETSALDSSNVEIAFQTILTQICHSMNR 161
Query: 181 R-AVEAGSNGTAST--LPSKGETI-NVKDDSSVLKR 212
+ ++ G +G A+ L + I N K +S LKR
Sbjct: 162 QPSISGGQSGEAALKHLEHALDIINNSKFESDSLKR 197
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 142/192 (73%), Gaps = 9/192 (4%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL+
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--------AVEAGS 187
V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+ A+ GS
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQNSSRTNAITLGS 180
Query: 188 NGTASTLPSKGE 199
A P GE
Sbjct: 181 -AQAGQEPGPGE 191
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 219 bits (557), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 112/201 (55%), Positives = 144/201 (71%), Gaps = 5/201 (2%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIWDTAG ERY
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLP 195
V TE+ FAE L F+ETSALD+TNVE AF VL +I+ VSK+ N T ++
Sbjct: 121 VPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR----QNSTRTSAI 176
Query: 196 SKGETINVKDDSSVLKRIGCC 216
+ G +D KR CC
Sbjct: 177 TLGSAQAGQDPGPGEKR-ACC 196
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 152/216 (70%), Gaps = 6/216 (2%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + +E+Y+++FK+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +
Sbjct: 2 GNRAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAG E YR T YYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VM
Sbjct: 62 KAQIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVM 120
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK+DL V T++ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 121 LVGNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQR 180
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
N T S + G +D S KR CC N
Sbjct: 181 ----QNSTRSIPITLGNAQAGQDPSPGEKR-PCCIN 211
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRI-DNKVVKAQIWDTA 70
Y FK+VL+GDSGVGKSNL+ RFTKNEFN +SKSTIGVEFAT++++I D+K+VKAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYR+I S+YYRGAVGALLVYDVT +F +V WL+E+ E+ + + ++ML+GNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
V DG++FA + L F+ETSALDAT V+ AF +L +IYK +K+
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 149/211 (70%), Gaps = 5/211 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
E + ++KLV+IG+SGVGKSNLL RFT+NEF E K TIGVEFATR++ + K ++AQIWD
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWD 63
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQE+YRAIT AYYRGA GA+ VYDV++ +F + RW+ EL+ D +I +M++GNK
Sbjct: 64 TAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKA 123
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA-VEAGS 187
DL+ V+T DG FA++ S +F+ETSALD TNVE AF+++L QIYK K A +++ S
Sbjct: 124 DLKQEREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK--KKNATLKSDS 181
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIG--CC 216
+ ++ P E +++ S + G CC
Sbjct: 182 VPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 129/169 (76%), Gaps = 1/169 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKAQ 65
D+ YDYLFK+VLIGDS VGKSNLL RF K F L+SKSTIGVEFAT+++ + N KV KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIG 125
IWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL E+ D N+I+ L+G
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query: 126 NKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
NK+DL HL V+ EDG+ +A+ +L F ETS L N++ FTE+L I
Sbjct: 124 NKSDLTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTFTELLNLI 172
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 135/177 (76%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M + YDYLFK+VL+GDSGVGKSNLL RF KNEF+ ++TIGVEF+T+S++I+ +
Sbjct: 1 MESFDNSNFYDYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQ 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRA+T AYYR AVGALL+YD+T +F+N+ +W EL H++ N +
Sbjct: 61 LVKAQIWDTAGQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKI 177
++L+GNK DL A+ E+ + FA+ ++ F+ETSAL+A NV AF ++T+I+KI
Sbjct: 121 MILVGNKCDLSDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKI 177
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/166 (62%), Positives = 133/166 (80%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
V TE+ + FAE L F+ETSALD+TNVE AF VL +I+ VSK+
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 166
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 148/211 (70%), Gaps = 5/211 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
E + ++KLV+IG+SGVGKSNLL RFT+NEF E K TIGVEFATR++ + K ++AQIWD
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWD 63
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQE+YRAIT AYYRGA GA+ VYDV++ +F + RW+ EL+ D +I +M++GNK
Sbjct: 64 TAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKA 123
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA-VEAGS 187
DL+ V+T DG FA++ S +F+ETSALD TNVE AF+++L QIYK K A ++ S
Sbjct: 124 DLKQEREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK--KKNATLKNDS 181
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIG--CC 216
+ ++ P E +++ S + G CC
Sbjct: 182 VPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 103/170 (60%), Positives = 129/170 (75%), Gaps = 1/170 (0%)
Query: 6 PDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN-KVVKA 64
++ YDYLFK+VLIGDS VGKSNLL RF K F L+SKSTIGVEFAT+++ + N K+ KA
Sbjct: 2 AEQTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL E+ DPN+I+ L+
Sbjct: 62 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALV 121
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
GNK+DL HL V+ EDG+ +A +L F ETS L+ N++ F E+L I
Sbjct: 122 GNKSDLTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 140/184 (76%), Gaps = 6/184 (3%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ + E DY+FK+V++GDS VGK+ LL+RFT++EF L+SKSTIGVEF TR+L + K VKA
Sbjct: 25 EKEAEIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKA 84
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTD-PNIIVML 123
QIWDTAGQERYRA+TSAYYRGA+GA++VYDVTR ATF++V RW+ ELR H D + +V L
Sbjct: 85 QIWDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVAL 144
Query: 124 IGNKTDL---RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
IGNK D+ R VA ++ AE++ L+F E SAL NVE AF +L +++ +VS+
Sbjct: 145 IGNKADMPAGRREVA--ADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSR 202
Query: 181 RAVE 184
RA+E
Sbjct: 203 RALE 206
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 148/211 (70%), Gaps = 5/211 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
E + ++KLV+IG+SGVGKSNLL RFT+NEF E K TIGVEFATR++ + K ++AQIWD
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWD 63
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQE+YRAIT AYYRGA GA+ VYDV++ +F + RW+ EL+ D +I +M++GNK
Sbjct: 64 TAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGNKA 123
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA-VEAGS 187
DL+ V+T DG FA++ S +F+ETSALD TNVE AF+++L QIYK K A ++ S
Sbjct: 124 DLKQEREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK--KKNATLKNDS 181
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIG--CC 216
+ ++ P E +++ S + G CC
Sbjct: 182 VPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|361128636|gb|EHL00566.1| putative Ras-related protein Rab-11B [Glarea lozoyensis 74030]
Length = 149
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 97/136 (71%), Positives = 120/136 (88%)
Query: 37 EFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 96
+FNL+SKSTIGVEFATRS+++D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD++
Sbjct: 6 KFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 65
Query: 97 RHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETS 156
+H T++NV RWL+ELR+H D NI++ML+GNK+DLRHL AV TE+ K FA + +L F+ETS
Sbjct: 66 KHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETS 125
Query: 157 ALDATNVENAFTEVLT 172
ALDA+NVE AF +LT
Sbjct: 126 ALDASNVELAFQNILT 141
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 131/166 (78%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIG+SGVGK+NLLSRFT+NEF +S++TIGVEF+TR++ + +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLV+D+T+H T+ RWL+EL +H + I+VML+GNK+DL+
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
V TE+ + FAE L F+ETSALD+TNVE AF VL +I VSK+
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQ 166
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/211 (50%), Positives = 148/211 (70%), Gaps = 5/211 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
E + ++KLV+IG+SGVGKSNLL RFT+NEF E K TIGVEFATR++ + K ++AQIWD
Sbjct: 4 ETECMYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWD 63
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQE+YRAIT AYYRGA GA+ VYDV++ +F + RW+ EL+ D +I +M++GNK
Sbjct: 64 TAGQEKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKA 123
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA-VEAGS 187
DL+ V+T DG FA++ S +F+ETSAL+ TNVE AF+++L QIYK K A ++ S
Sbjct: 124 DLKQEREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIYK--KKNATLKNDS 181
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIG--CC 216
+ ++ P E +++ S + G CC
Sbjct: 182 VPSDNSKPKTEEKVDISQTQSAQTQGGKKCC 212
>gi|429965625|gb|ELA47622.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 207
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 133/170 (78%), Gaps = 1/170 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E YDYLFK+VLIGDSGVGK+NLLS+ T+ EF+ E+K+TIGVEFATR+ +IDN V+KAQIW
Sbjct: 2 ESYDYLFKIVLIGDSGVGKTNLLSQLTRGEFSAETKATIGVEFATRTFKIDNLVIKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGR-WLRELREHTDPNIIVMLIGN 126
DTAGQERYRAITSAYYRG +GAL+VYD+TR +T N + WL +L+E++ I +M++GN
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALIVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMMVGN 121
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
KTDL V+ G A+ +L F+ETSALD +NVE AF E++ +Y+
Sbjct: 122 KTDLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFDELIKAVYR 171
>gi|1619855|gb|AAB16973.1| rab11-like, partial [Caenorhabditis elegans]
Length = 127
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/123 (78%), Positives = 113/123 (91%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ ++ K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++M +GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGN 124
Query: 127 KTD 129
K D
Sbjct: 125 KCD 127
>gi|125563248|gb|EAZ08628.1| hypothetical protein OsI_30902 [Oryza sativa Indica Group]
Length = 164
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/149 (67%), Positives = 124/149 (83%), Gaps = 5/149 (3%)
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
RYRAITSAYYRGAVGAL+VYDVTRH TF+NV RWL+ELR+HTD NI++ML+GNK DLR
Sbjct: 19 HSRYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLR 78
Query: 132 HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTA 191
HL AVS ED K FAE+ES +FMETSAL++ NVE+AFTEVLTQIY++VSK+A++ G + A
Sbjct: 79 HLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDPAA 138
Query: 192 STLPSKGETINV--KDDSSVLKRIGCCSN 218
P +G+TINV KDD S +K+ GCCS+
Sbjct: 139 ---PPRGQTINVGGKDDVSAVKKSGCCSS 164
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 147/211 (69%), Gaps = 6/211 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++YDYL+K+V+IGDSGVGKSNLL RFT++EF+ E KSTIGVEF+++ +R +++ V+ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGA+GA+LVYDVT+ ++F+++ RWL ELR++ D ++ M++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL + VS ++G+ A++ +F ETSA D NVE AF + I KI ++ S
Sbjct: 124 CDLEQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAI---IQKICDEQTRLRAS 180
Query: 188 NGTASTLP---SKGETINVKDDSSVLKRIGC 215
P SK E ++ K+ GC
Sbjct: 181 ETKPVIKPISDSKVEIDKTPEEQQTPKKSGC 211
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 135/167 (80%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++YDYL+K+V+IGDSGVGKSNLL RFT++EF+ E KSTIGVEF+++ +R +++ V+ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT+AYYRGA+GA+LVYDVT+ ++F+++ RWL ELR++ D ++ M++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
DL + V+ ++G+ A++ +F ETSALD NVE AF ++ +I
Sbjct: 124 CDLEQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKI 170
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/155 (65%), Positives = 128/155 (82%)
Query: 17 VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYR 76
VLIG+SGVGK+NLLSRFT+NEFN +S++TIGVEF+TR++ + + VKAQIWDTAG ERYR
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAV 136
AITSAYYRGAVGAL+V+D+T+H T+ V RWL+EL +H + +I+VML+GNK+DL V
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 137 STEDGKAFAEQESLYFMETSALDATNVENAFTEVL 171
TE+ K FAE + L F+ETSALD+TNVE AF VL
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAFETVL 155
>gi|168048429|ref|XP_001776669.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671961|gb|EDQ58505.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 161
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/162 (60%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
Query: 56 RIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHT 115
++D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H T++NV RWL+ELR+H
Sbjct: 1 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHA 60
Query: 116 DPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
D NI++ML+GNK+DL+HL VST+D +AF+E+E L F+ETSAL++TNVE AF +LT+IY
Sbjct: 61 DSNIVIMLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIY 120
Query: 176 KIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+IVSK+A+ + N T P +G I D ++ + GCCS
Sbjct: 121 RIVSKKALASEENTTEG--PGQGTNIVPLDSNAPDLKKGCCS 160
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 149/211 (70%), Gaps = 12/211 (5%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++YDY +K+V+IGDSGVGK+N++++FT+ EF+ E+K+T+GVEFA + L ID+K++KAQ+W
Sbjct: 5 DDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQLW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAI S+YY+GA GAL+V+D+T+ +TF NV RW++E++E T I ++L+GNK
Sbjct: 65 DTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTSNEISIILVGNK 124
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
+DLRHL VS++ A+A + + F+ETSA D NV AF +++ +I+
Sbjct: 125 SDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINEIH--------SKNK 176
Query: 188 NGTASTLPSKGETIN--VKDDSSVLKRIGCC 216
N + T + I V+ DS K GCC
Sbjct: 177 NNSIYTQKKTNQQITEAVQIDSQ--KDSGCC 205
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 148/216 (68%), Gaps = 9/216 (4%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+ EYD+LFK++LIGDSGVGK+N+L RF KNEF L+SK TIGVEF+T+++ ++NK VK QI
Sbjct: 6 ENEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAIT+AYYRGAVGA + YD+TR TF N+ +WL E++E+ NI++M+IGN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGN 125
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE-- 184
K D + V + + +Q + ++ETSA + NVE AF+ ++++I+ +S + +
Sbjct: 126 KIDQANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSKQQKNV 185
Query: 185 ---AGSNGTA-STLPSKGETINVKDDSSVLKRIGCC 216
G N T LPSK T K + ++ CC
Sbjct: 186 KQLQGDNLTLDDDLPSKSIT---KKTNCRKEKENCC 218
>gi|440494412|gb|ELQ76793.1| GTPase Rab11/YPT3, small G protein superfamily [Trachipleistophora
hominis]
Length = 207
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 133/170 (78%), Gaps = 1/170 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E YDYLFK+VLIGDSGVGK+NLLS+ T+ EF+ E+K+TIGVEFAT++ +ID+ V+KAQIW
Sbjct: 2 ENYDYLFKIVLIGDSGVGKTNLLSQLTRKEFSAETKATIGVEFATKTFKIDSLVIKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGR-WLRELREHTDPNIIVMLIGN 126
DTAGQERYRAITSAYYRG +GAL+VYD+TR +T N + WL +L+E++ I +ML+GN
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALVVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMLVGN 121
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
KTDL V+ G A+ +L F+ETSALD +NVE AF E++ +Y+
Sbjct: 122 KTDLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFEELIKAVYR 171
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/136 (71%), Positives = 119/136 (87%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAF 144
DL HL AV T++ K F
Sbjct: 129 DLAHLRAVPTDEAKKF 144
>gi|224086265|ref|XP_002335212.1| predicted protein [Populus trichocarpa]
gi|222833087|gb|EEE71564.1| predicted protein [Populus trichocarpa]
Length = 143
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/146 (69%), Positives = 124/146 (84%), Gaps = 5/146 (3%)
Query: 75 YRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLV 134
YRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD N ++ML+GNK DLRHL
Sbjct: 1 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGNKADLRHLR 60
Query: 135 AVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTL 194
AV+TED K FAE+ES +FMETSAL++ NVENAFTEVLTQIY++VS++A++ G + T L
Sbjct: 61 AVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDVGDDST--YL 118
Query: 195 PSKGETINV--KDDSSVLKRIGCCSN 218
P KG+TINV +DD S +K+ GCCS+
Sbjct: 119 P-KGQTINVGSRDDVSAVKKAGCCSS 143
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 132/174 (75%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+ D L+K+V+IGDSGVGKSNL++RFT+N+F ++K TIGVEF +S+ D +K QIWD
Sbjct: 2 DCDVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWD 61
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQER+RAI++AYYRGA GAL+VYD+T +F N+ +W +E+ + I +L+GNK
Sbjct: 62 TAGQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKC 121
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
DL HL V T G+AFAE+ ++ FMETSALD+TNV+ AFT +L +IYK S+++
Sbjct: 122 DLNHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKS 175
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 149/208 (71%), Gaps = 5/208 (2%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
E DY+FK+V++GDS VGK+ LL RFT++EF L+SKSTIG+EF TR++ I VKAQIWD
Sbjct: 2 EEDYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWD 61
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRA+TSAYYRGA+GA+LVYDVT TF + RW+ ELR H D +I+VML+GNK
Sbjct: 62 TAGQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKA 121
Query: 129 DLRHLVA---VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA 185
DL V ++ AFAE++ L+F E SAL NVE AF +L +I+ IVS++ ++A
Sbjct: 122 DLARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLDA 181
Query: 186 G--SNGTASTLPSKGETINVKDDSSVLK 211
+ GT L KG +++ D+ S+++
Sbjct: 182 AAETGGTTDVLALKGTKLSLADEISIME 209
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/161 (57%), Positives = 135/161 (83%)
Query: 14 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQE 73
F +VLIGDS VGK+N+LSRF +EFNL+SK+T+GVEF+ + ++++N ++KAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHL 133
RYR+ITSAYYRGAVGAL+VYD+T ++F+NV WL ELR+H+D +++V+LIGNK DL +
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 134 VAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
++ST++ +A+AE+ ++ F+ETSA + T ++ AFT VL ++
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|384501465|gb|EIE91956.1| hypothetical protein RO3G_16667 [Rhizopus delemar RA 99-880]
Length = 187
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYL+KLVL GDSGVGKSN++SRF +NEF+L + T GV+F T++L DN +VKAQ+
Sbjct: 2 DDEYDYLYKLVLTGDSGVGKSNVVSRFARNEFDLVYRKTYGVDFTTKTLGTDNHIVKAQL 61
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
DTAG+ER+R I +A+YR A GA +VYD+T ++F+NV WLR++RE+ DPN ++ML+GN
Sbjct: 62 CDTAGEERFRVIITAFYRNAAGAFIVYDITSRSSFENVHIWLRKIREYADPNAVIMLVGN 121
Query: 127 KTDL-RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQI 174
K DL + V TE+G+ AE+E L F+ETSALDATN++ AFT ++++I
Sbjct: 122 KVDLSKSSREVETEEGRLLAEEEGLLFIETSALDATNIDAAFTILISKI 170
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 146/218 (66%), Gaps = 23/218 (10%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
Y +E+ DY+FK+V+IGDS VGK+ +LSRF+KNE ++ I+ KV+K
Sbjct: 17 YDMEEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIK 60
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F +V +W+ ELR H D +I++ML
Sbjct: 61 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIML 120
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK DL L V TED FAE + L+F ETSAL NVE AF ++L +I +VSK+A+
Sbjct: 121 VGNKGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKAL 180
Query: 184 EAGSNGTASTLPSKGETINVKDDS----SVLKRIGCCS 217
E G+ + KG I+V + S +K++ CS
Sbjct: 181 ECGN---VKGIALKGSKIDVISGAELEISEIKKLSSCS 215
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 126/156 (80%)
Query: 16 LVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERY 75
+VLIG+SGVGK+NLLSRFT+NEF+ +S++TIGVEF+TR++ + VKAQIWDTAG ERY
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 92
Query: 76 RAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVA 135
RAITSAYYRGAVGALLV+D+T+H T+ V RWL+EL +H + I+VML+GNK+DL
Sbjct: 93 RAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 152
Query: 136 VSTEDGKAFAEQESLYFMETSALDATNVENAFTEVL 171
V T++ + FAE L F+ETSALD+TNVE AF VL
Sbjct: 153 VPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 188
>gi|351725553|ref|NP_001235049.1| uncharacterized protein LOC100527366 [Glycine max]
gi|255632183|gb|ACU16451.1| unknown [Glycine max]
Length = 111
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/111 (87%), Positives = 107/111 (96%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA YK D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MAAYKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLREL 111
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+EL
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
>gi|66807211|ref|XP_637328.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122086021|sp|Q54KM9.1|RB11B_DICDI RecName: Full=Ras-related protein Rab-11B
gi|2708641|gb|AAB92559.1| GTPase rab11b [Dictyostelium discoideum]
gi|60465730|gb|EAL63807.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 220
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 131/167 (78%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
EYDYL K+V+IGDSGVGKSNLLSR+ KNEF++ STIGVEF+T++L+IDNK++K Q+WD
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWD 66
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQE+Y +IT +YY+GA+GAL+VY++ +F N+ +WL++ RE+ + +ML+GNK+
Sbjct: 67 TAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKS 126
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
DL+ VST +GK FAE+ + F+ETSALD+ NVE AF + IY
Sbjct: 127 DLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIY 173
>gi|225716714|gb|ACO14203.1| Ras-related protein YPTC6 [Esox lucius]
Length = 138
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/117 (80%), Positives = 110/117 (94%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYD+LFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
>gi|297790260|ref|XP_002863031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308833|gb|EFH39290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/166 (61%), Positives = 122/166 (73%), Gaps = 2/166 (1%)
Query: 53 RSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELR 112
R + ++ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR
Sbjct: 2 RVITVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 61
Query: 113 EHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLT 172
+H D NI++M+ GNK DL HL +V+ EDG+ AE E L F+ETSAL+ATNVE AF VL
Sbjct: 62 DHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLA 121
Query: 173 QIYKIVSKR-AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+IY I+SK+ + S +P +G TINV D S KR GCCS
Sbjct: 122 EIYHIISKKALAAQEAAAANSAIPGQGTTINVGDTSGAGKR-GCCS 166
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 134/208 (64%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKAD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVSTE+G+ FA++ L FMETSA A NVE AF ++I++ + + + +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQKIEEGVFDVSNEA 182
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCCS 217
+ + + DSS + GCCS
Sbjct: 183 SGIKIGVLPNHPGHRGDSSGPQSGGCCS 210
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 149/214 (69%), Gaps = 5/214 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ ++YDY +K+V+IGDSGVGK+N++++FT+ EF+ E+K+T+GVEFA + L ID+K++KA
Sbjct: 2 RNSDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
Q+WDTAGQERYRAI S+YY+GA GAL+V+D+T+ +TF NV RW++ ++E T I ++L+
Sbjct: 62 QLWDTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMK-VQESTSNEISIILV 120
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DLRHL VS++ A+A + + F+ETSA D NV AF +++ I++
Sbjct: 121 GNKSDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINGKALILNVEIHS 180
Query: 185 AGSNGTASTLPSKGETIN--VKDDSSVLKRIGCC 216
N + T + I V+ DS K GCC
Sbjct: 181 KNKNNSIYTQKKTNQQITEAVQIDSQ--KDSGCC 212
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 140/206 (67%), Gaps = 5/206 (2%)
Query: 12 YLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAG 71
+ ++V+IG+SGVGKSNLL RFT+NE+ E K TIGVEFATR++ D K ++AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLR 131
QE+YRAIT AYYRGA GA+ VYDV++ TF + RW+ EL+ ++++M++GNK+DL
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKSDLE 140
Query: 132 HLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTA 191
V +G+ FA++ + +FMETSAL NVE AFTE+L IYK K+ TA
Sbjct: 141 QERDVKPSEGEEFAQRHNSFFMETSALTGNNVEKAFTELLVHIYK---KKNTTITPEKTA 197
Query: 192 STL-PSKGETINVKDDSSVLKRIGCC 216
T PS + +N+ SS K+ CC
Sbjct: 198 ETQKPSVEDRVNINKQSSEEKK-KCC 222
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + I +K VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF+++GRWL E R+H+ N+++MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIGNKND 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY-KIVSKR 181
L H AVSTE+GKAFA++ L FMETSA A NVE AF +I+ IVS +
Sbjct: 123 LEHRRAVSTEEGKAFADKHGLIFMETSAKTAYNVEQAFINTAEEIHGNIVSGK 175
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 145/214 (67%), Gaps = 9/214 (4%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+YD L+K V++GDSG GK+ LL RFT+NEF+ E KSTIGVEF+++ ++ + V+ QIW
Sbjct: 2 EDYDVLYKTVMMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQYKDSAVRIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRAIT AYYRG++GA++VYDVT+ ++F+ + RW EL E+ D +++ M+IGNK
Sbjct: 62 DTAGQERYRAITGAYYRGSLGAVMVYDVTKKSSFEALDRWHNELIENGDKSVVKMVIGNK 121
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY-KIVSKRAVEAG 186
DL + V+TE+ + FA++ YF ETSA+D TNVE AF +++ I + K+A EA
Sbjct: 122 CDLEQMREVTTEEAEEFAKKTGSYFFETSAMDGTNVEKAFMQMIETICDRQFEKKAAEA- 180
Query: 187 SNGTASTLPSKGETINVKD----DSSVLKRIGCC 216
+ P E + ++D K+ CC
Sbjct: 181 ---KPAQKPFLEERVVIEDPQVPQEPPKKKFQCC 211
>gi|449677940|ref|XP_002159779.2| PREDICTED: ras-related protein Rab-11B-like, partial [Hydra
magnipapillata]
Length = 162
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/159 (60%), Positives = 121/159 (76%), Gaps = 2/159 (1%)
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
KV+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI
Sbjct: 2 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYENVERWLKELRDHADANI 61
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
++ML+GNK+DLRHL AV TE+ KAFAE+ L F+ETSALD+TNVE AF +L +IY IVS
Sbjct: 62 VIMLVGNKSDLRHLRAVPTEEAKAFAEKNELSFIETSALDSTNVEVAFRNILEEIYHIVS 121
Query: 180 KRAVEAGSNGTASTLPSKGETINVKDDSSVLKR--IGCC 216
++ + SN T + +TI V + +R + CC
Sbjct: 122 QKQIHNASNRTGNQPSDNVQTIQVAPTVEIDQRKSVKCC 160
>gi|125546393|gb|EAY92532.1| hypothetical protein OsI_14270 [Oryza sativa Indica Group]
Length = 168
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/164 (63%), Positives = 127/164 (77%), Gaps = 4/164 (2%)
Query: 56 RIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHT 115
+++ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+NV RWL+ELR+H
Sbjct: 6 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHA 65
Query: 116 DPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIY 175
D NI+VMLIGNK DL+HL +VS ED +FAE+E L F+ETSALDATNV+ AF VLT+IY
Sbjct: 66 DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIY 125
Query: 176 KIVSKRAVEAGSNGTASTLPSKGETINVK--DDSSVLKRIGCCS 217
+I+SK+A+ A G + +G++I V D SS R CCS
Sbjct: 126 RIISKKALAADEAGAGAGAVREGQSIQVSATDSSSFTSR--CCS 167
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 152/221 (68%), Gaps = 10/221 (4%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EE DY+FK+V+IGDSGVGK+ LL RFT+ +F L+SKSTIG+EF TR++ I + VKAQIW
Sbjct: 2 EEPDYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYDVTR +F + RW+ ELR H D +I+V L+GNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNK 121
Query: 128 TDLRHLVAVSTE----DGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
DL E + +AFAE++ L+F E SAL NVE AF +L +I+ VS++ +
Sbjct: 122 ADLATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPL 181
Query: 184 EAG---SNGTASTLPSKGETINVK---DDSSVLKRIGCCSN 218
EA +G L KG +++ + ++S +K CS+
Sbjct: 182 EAARGNGDGDDDVLVLKGISLSQELSMMETSAMKTPSRCSS 222
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID + +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVS E+G+ FA++ L F+E SA A NVE AF + +I + + + + SN
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDL-SNE 181
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G D +V +R GCC+
Sbjct: 182 SSGIKVGYGRPQGPSGDGTVSQRGGCCN 209
>gi|449443494|ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 132/217 (60%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D + + GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGATAQSGGCCS 211
>gi|225447452|ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 133/217 (61%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK--------- 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK + +
Sbjct: 123 LAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFISTASTIYKKIQEGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D S + GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGSSSQAGGCCS 211
>gi|312377320|gb|EFR24177.1| hypothetical protein AND_11405 [Anopheles darlingi]
Length = 1044
Score = 202 bits (515), Expect = 6e-50, Method: Composition-based stats.
Identities = 93/148 (62%), Positives = 117/148 (79%), Gaps = 2/148 (1%)
Query: 57 IDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTD 116
+D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D
Sbjct: 6 VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD 65
Query: 117 PNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
NI++ML+GNK+DLRHL AV T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+
Sbjct: 66 QNIVIMLVGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYR 125
Query: 177 IVSKRAVEAGSNGTASTLPSKGETINVK 204
IVS++ + G S + E I+VK
Sbjct: 126 IVSQKQIRDPPEG--SVIRPNLENIDVK 151
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 145/213 (68%), Gaps = 9/213 (4%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK+VL+GD GVGK+ + +R+T +EFN +SKSTIGVEFA +++ I+ +K QIWDT
Sbjct: 3 YDYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
+G+ERYRAITSAYYRG+VGA+LV+DVT+ +F+++ W +LR++ D NI+V ++GNK D
Sbjct: 63 SGEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKID 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS------KRAV 183
L VST + + FA ++METSALD T VENAF +V +I++IV K+ V
Sbjct: 123 L-PTREVSTVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSRQQARKKTV 181
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
A S G ++ GE V S+ CC
Sbjct: 182 RASSIGQTRSI-KLGEADEVA-KPSIFSSSDCC 212
>gi|146079278|ref|XP_001463744.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|398011473|ref|XP_003858932.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
gi|134067831|emb|CAM66111.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|322497143|emb|CBZ32214.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
Length = 208
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 135/211 (63%), Gaps = 6/211 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EE + FK+VLIGDSGVGKSNL++R+T NEFN E+ STIGVEF T+S++I ++ K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F ++ WL+ELR + LIGNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL HL V E FA + L F+ETSAL+ TNV+ AF + +Y++V V +
Sbjct: 122 CDLEHLRVVKKEAADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVV----VTPQT 177
Query: 188 NGTASTLPSKGETINVKDDSS--VLKRIGCC 216
T P +G T+N+ S K GCC
Sbjct: 178 READRTAPKQGRTVNMNPSESPETKKTSGCC 208
>gi|401416870|ref|XP_003872929.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489155|emb|CBZ24407.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 208
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 135/211 (63%), Gaps = 6/211 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EE + FK+VLIGDSGVGKSNL++R+T NEFN E+ STIGVEF T+S++I ++ K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F ++ WL+ELR + LIGNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL HL V E FA + L F+ETSAL+ TNV+ AF + +Y++V V +
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVV----VTPQT 177
Query: 188 NGTASTLPSKGETINVKDDSS--VLKRIGCC 216
T P +G T+N+ S K GCC
Sbjct: 178 READRTAPKQGRTVNMNPSESPEAKKSSGCC 208
>gi|217069930|gb|ACJ83325.1| unknown [Medicago truncatula]
Length = 108
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/108 (87%), Positives = 103/108 (95%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWL 108
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL 108
>gi|157865435|ref|XP_001681425.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
gi|68124721|emb|CAJ02862.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
Length = 208
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 136/211 (64%), Gaps = 6/211 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
EE + FK+VLIGDSGVGKSNL++R+T NEFN E+ STIGVEF T+S++I+++ K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIESRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F ++ WL+ELR + LIGNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL HL V E FA + L F+ETSAL+ TNV+ AF + +Y++V V +
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVV----VTPQT 177
Query: 188 NGTASTLPSKGETINVKDDSS--VLKRIGCC 216
T P +G T+N+ S K GCC
Sbjct: 178 READRTAPKQGRTVNMNPSESQEAKKSGGCC 208
>gi|224089509|ref|XP_002308739.1| predicted protein [Populus trichocarpa]
gi|118487262|gb|ABK95459.1| unknown [Populus trichocarpa]
gi|222854715|gb|EEE92262.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 131/217 (60%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D + GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGGSAQAGGCCS 211
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 132/217 (60%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIRTASTIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D + + GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGAASQGGGCCS 211
>gi|15235981|ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
gi|297800394|ref|XP_002868081.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|75279776|sp|P92963.1|RAB1C_ARATH RecName: Full=Ras-related protein RABB1c; Short=AtRABB1c; AltName:
Full=Ras-related protein Rab2A; Short=AtRab2A
gi|1765896|emb|CAA70498.1| Rab2-like protein [Arabidopsis thaliana]
gi|5281023|emb|CAB45962.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|27311815|gb|AAO00873.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis thaliana]
gi|297313917|gb|EFH44340.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|332658457|gb|AEE83857.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 131/217 (60%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D S + GCC
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGSTSQGGGCCG 211
>gi|388495178|gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 130/217 (59%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPVKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGPSASAGGCCS 211
>gi|255637328|gb|ACU18994.1| unknown [Glycine max]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 130/217 (59%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGPFASAGGCCS 211
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 1/209 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID++ +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVS E+G+ FA++ L F+E SA A NVE AF +I + + + + +
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDVSNES 182
Query: 190 TASTLP-SKGETINVKDDSSVLKRIGCCS 217
+ + + + + D +V +R GCCS
Sbjct: 183 SGIKVGYGRPQGPSGSRDGAVAQRGGCCS 211
>gi|302846433|ref|XP_002954753.1| RabB/Rab2 [Volvox carteri f. nagariensis]
gi|549811|sp|P36863.1|YPTV4_VOLCA RecName: Full=GTP-binding protein yptV4; AltName: Full=RAB2 homolog
gi|409166|gb|AAA34253.1| GTP-binding protein [Volvox carteri]
gi|300259936|gb|EFJ44159.1| RabB/Rab2 [Volvox carteri f. nagariensis]
Length = 213
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 129/203 (63%), Gaps = 13/203 (6%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------- 179
L H AV+TE+G+ FA++ L F+ETSA A NVE AF +IYK +
Sbjct: 123 LTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNES 182
Query: 180 ---KRAVEAGSNGTASTLPSKGE 199
K AG+ G + P +G+
Sbjct: 183 YGIKVGYGAGNAGPQAAKPGEGD 205
>gi|642121|gb|AAA61831.1| small GTP-binding protein [Oryza sativa Indica Group]
Length = 223
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 131/208 (62%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ VMLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVS E+G+ FA++ L FME SA A NVE AF + IYK + + +
Sbjct: 123 LSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQGGVFDVSNES 182
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCCS 217
S L + + + V + + LK + +
Sbjct: 183 YGSKLAMRYQMLQVVELAHPLKVVAAAA 210
>gi|356555789|ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 130/217 (59%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGPSASAGGCCS 211
>gi|430811332|emb|CCJ31255.1| unnamed protein product [Pneumocystis jirovecii]
Length = 144
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 114/134 (85%), Gaps = 1/134 (0%)
Query: 38 FNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
LESKSTIGVEFATRS+++D K +KAQIWDTAGQERYRAITSAY GAVGALLVYD+++
Sbjct: 10 IQLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYV-GAVGALLVYDISK 68
Query: 98 HATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSA 157
TF+N+ RWL+ELR+H D NI++ML+GNK+DLRHL AVST+DGK F+ L F+ETSA
Sbjct: 69 QTTFENIQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVSTDDGKNFSTTNGLSFIETSA 128
Query: 158 LDATNVENAFTEVL 171
LD+TNV+ AF ++L
Sbjct: 129 LDSTNVDCAFQDIL 142
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 128/202 (63%), Gaps = 13/202 (6%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------- 179
L H AV+TE+G+ FA++ L F+ETSA A NVE AF +IYK +
Sbjct: 123 LTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNES 182
Query: 180 ---KRAVEAGSNGTASTLPSKG 198
K AG+ G + P +G
Sbjct: 183 YGIKVGYGAGNAGPQTVKPGEG 204
>gi|351726934|ref|NP_001238167.1| guanine nucleotide regulatory protein [Glycine max]
gi|1208537|gb|AAA90955.1| guanine nucleotide regulatory protein [Glycine max]
Length = 211
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 129/217 (59%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEHARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGPSASAGGCCS 211
>gi|224124750|ref|XP_002329939.1| predicted protein [Populus trichocarpa]
gi|118484431|gb|ABK94092.1| unknown [Populus trichocarpa]
gi|222871961|gb|EEF09092.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 132/217 (60%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKSD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G + + D + + GCCS
Sbjct: 183 YGIKVGYGGIPGSSGGR--------DGASAQAGGCCS 211
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 119/169 (70%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIV 178
L H AV+TE+G+ FA++ L F+ETSA A NVE AF +IYK +
Sbjct: 123 LTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKI 171
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 144/216 (66%), Gaps = 6/216 (2%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ +E+YD L K++++GDSGVGK+NL++RF + +F +SK T+GVEF R + I K +KA
Sbjct: 2 QDEEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
Q+WDTAGQE++RAIT YYRGA+GA++ YD+T+ +F NV RW+ ELREH D N+++MLI
Sbjct: 62 QVWDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLI 121
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
G K+DL V EDG A Q ++ F+ETSAL A NV AF+ +L +IY + + E
Sbjct: 122 GTKSDLESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLLEKIYVGIDNQGKE 181
Query: 185 AGSNGTASTLPSKGETI----NVKDDSSVLKRIGCC 216
+ L S+ TI N K D++ K+ CC
Sbjct: 182 YQKRASIK-LTSEPITIKNAQNTKPDTTKSKK-QCC 215
>gi|357448155|ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago truncatula]
gi|124360890|gb|ABN08862.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|217075310|gb|ACJ86015.1| unknown [Medicago truncatula]
gi|355483401|gb|AES64604.1| Small GTP binding protein Rab2 [Medicago truncatula]
Length = 211
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 130/217 (59%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGPSAAGGGCCS 211
>gi|194744897|ref|XP_001954929.1| GF16497 [Drosophila ananassae]
gi|190627966|gb|EDV43490.1| GF16497 [Drosophila ananassae]
Length = 166
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/157 (59%), Positives = 118/157 (75%), Gaps = 1/157 (0%)
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+ KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWLRELR+H D NI+
Sbjct: 11 LFKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 70
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL +V T++ K FAE+ L F+ETSALD+TNVE AF +LT+IY+IVS+
Sbjct: 71 IMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 130
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ + G PS E I+VK + R CC
Sbjct: 131 KQIRDPPEGDV-IRPSNVEPIDVKPTVTADVRKQCCQ 166
>gi|297740452|emb|CBI30634.3| unnamed protein product [Vitis vinifera]
Length = 131
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 112/151 (74%), Gaps = 22/151 (14%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YDYLFK F+LESKSTIGVEFATRS+R+D+K
Sbjct: 1 MASYRADDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDK 38
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 39 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 98
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLY 151
+ML+GNK DLRHL A+ D + E +Y
Sbjct: 99 IMLVGNKADLRHLRALCPRDRPSMLEPRMMY 129
>gi|145525673|ref|XP_001448653.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834495|emb|CAI44562.1| rab_A44 [Paramecium tetraurelia]
gi|124416208|emb|CAK81256.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 128/173 (73%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++E+ YLFK++LIGDSGVGK+NL +R EF +++ TIGVEF R++R D +VK QI
Sbjct: 3 EDEFSYLFKIILIGDSGVGKTNLFNRLQNKEFQYDTRPTIGVEFINRTVRQDGNLVKCQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQE++RAIT+AYYRGA G + YDVT+ T+++ RW+ E+++ D +I++ML+GN
Sbjct: 63 WDTAGQEKFRAITNAYYRGAKGVFVCYDVTKQGTYESTLRWMSEIKQFGDHDIVIMLVGN 122
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
K DL V T++ F EQ + ++ETSAL+ NVE AF +++T+IYKIVS
Sbjct: 123 KIDLAEQRIVRTDEVSQFCEQNKVGYIETSALNNINVEMAFNQMVTEIYKIVS 175
>gi|224102877|ref|XP_002312839.1| predicted protein [Populus trichocarpa]
gi|118481778|gb|ABK92828.1| unknown [Populus trichocarpa]
gi|222849247|gb|EEE86794.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 1/209 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID + +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVS E+G+ FA++ L F+E SA A NVE AF +I + + + + +
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIGTAGKILQNIQEGVFDVSNES 182
Query: 190 TASTLP-SKGETINVKDDSSVLKRIGCCS 217
+ + + + + D +V +R GCCS
Sbjct: 183 SGIKVGYGRPQGASGARDGTVAQRGGCCS 211
>gi|168046616|ref|XP_001775769.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162672921|gb|EDQ59452.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 212
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 121/171 (70%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHANSNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
L H AVSTE+G+ FA++ L FMETSA A NVE+AF +IY+ + +
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLVFMETSAKTAQNVEDAFINTAAKIYQKIEE 173
>gi|15235980|ref|NP_193449.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
gi|75318151|sp|O23561.1|RAB1A_ARATH RecName: Full=Ras-related protein RABB1a; Short=AtRABB1a; AltName:
Full=Ras-related protein Rab2B; Short=AtRab2B
gi|2245075|emb|CAB10497.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268467|emb|CAB80987.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|67633750|gb|AAY78799.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332658456|gb|AEE83856.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
Length = 205
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 126/207 (60%), Gaps = 5/207 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y Y FK ++IGD+GVGKS LL +FT F TIGVEF +++ IDNK +K QIWDT
Sbjct: 3 YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R++T +YYRG G LLVYD+TR TF ++ WL E R+H N+ MLIGNK D
Sbjct: 63 AGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L VSTE+G+ FA + L FME SA A NVE AF E IYK + V+ +
Sbjct: 123 LEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEANEP 182
Query: 190 TASTLPSKGETINVKDDSSVLKRIGCC 216
+ P G KD SS +R GCC
Sbjct: 183 GITPGPFGG-----KDASSSQQRRGCC 204
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 135/212 (63%), Gaps = 5/212 (2%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + I NK +K QIWDT
Sbjct: 3 YAYLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIGNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLATWLEDARQHANSNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVSTE+G FA++ L FMETSA A NVE AF +IY+ + + + SN
Sbjct: 123 LDHRRAVSTEEGAQFAKEHGLVFMETSAKTAQNVEEAFINTAAKIYQKIEEGIFDV-SNE 181
Query: 190 TAS----TLPSKGETINVKDDSSVLKRIGCCS 217
T+ G +V++D + + GCC+
Sbjct: 182 TSGIKVGYGGGAGTAGSVRNDYTAPQSSGCCN 213
>gi|168061692|ref|XP_001782821.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162665723|gb|EDQ52398.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 119/167 (71%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYK 176
L H AVSTE+G+ FA++ L FMETSA A NVE+AF +IY+
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQ 169
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 132/210 (62%), Gaps = 3/210 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVS E+G+ FA++ L F+E SA A NVE AF E +I + + + SN
Sbjct: 123 LAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDV-SNE 181
Query: 190 TASTLPSKGETINVKD--DSSVLKRIGCCS 217
++ G T D ++ + GCC
Sbjct: 182 SSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 142/216 (65%), Gaps = 19/216 (8%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+P ++ DY+FK+V+IGDS VGK+ +LSRF KNEF +SKSTIGVEF TR++ I+ K++KA
Sbjct: 32 RPLQKIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLIKA 91
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF +V RW+ ELR H D +I++MLI
Sbjct: 92 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIMLI 151
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK DL V T+ +F+ +I K+VSKR++E
Sbjct: 152 GNKGDLVDQRVVHTDKCCGVCRGSGPFFLRD----------------FKINKVVSKRSLE 195
Query: 185 A--GSNGTASTLPSKGETINVKD-DSSVLKRIGCCS 217
+ G N A+ SK + I+ + D + +K + CS
Sbjct: 196 SNNGKNNIATLKGSKIDIISGPELDITEMKEVPSCS 231
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID + +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +ML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKAD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVS E+G+ FA++ L F+E SA A NVE AF + +I + + + + +
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSNES 182
Query: 190 TASTLP-SKGETINVKDDSSVLKRIGCC 216
+ + + + + D +V +R GCC
Sbjct: 183 SGIKVGYGRPQGPSGARDGTVAQRGGCC 210
>gi|340500662|gb|EGR27525.1| Ras-related protein ric2, putative [Ichthyophthirius multifiliis]
Length = 235
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 149/218 (68%), Gaps = 12/218 (5%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
+ G++P YDYL K+VL+GDSGVGKSN+LSRFT+++F +++ STIGVEF R + +NK
Sbjct: 27 VQGFQP--LYDYLIKIVLVGDSGVGKSNILSRFTRDQFQIDNCSTIGVEFGQRIITTENK 84
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+++ QIWDTAG E++++IT ++RGA+G LL+YD+T+ A+FQ + ++++++ + +
Sbjct: 85 IIQTQIWDTAGTEKFQSITQQFFRGALGVLLIYDITKQASFQQCEKLFQQIKDNVEDHTQ 144
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
++L+GNKTD+ +L VS ++G FA+ + F+E SAL+ N++ AF V+ QIY++ K
Sbjct: 145 ILLVGNKTDISNLRTVSKQEGLEFAKTHKIQFIEVSALENINIDQAFMIVVQQIYELCQK 204
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
V ++ + I +KD+ +K CC+N
Sbjct: 205 SYVTVETD----------KKIQLKDNVDKIKIAHCCTN 232
>gi|388514081|gb|AFK45102.1| unknown [Lotus japonicus]
Length = 211
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 129/217 (59%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA+ L FME SA A NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKDLGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGPSASAGGCCS 211
>gi|168049241|ref|XP_001777072.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671515|gb|EDQ58065.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 121/171 (70%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
L H AVSTE+G+ FA++ L FMETSA A NVE+AF +IY+ + +
Sbjct: 123 LAHRRAVSTEEGERFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQKIEE 173
>gi|154333217|ref|XP_001562869.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059874|emb|CAM37302.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 208
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 138/211 (65%), Gaps = 6/211 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
E+ + FK+VLIGDSGVGKSNL++R+T +EF+ E+ STIGVEF T+S++I+++ K QIW
Sbjct: 2 EDTNLSFKIVLIGDSGVGKSNLMTRYTMSEFSQETPSTIGVEFMTKSIKIEDRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F ++ WL+ELR + LIGNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPVTCCIFLIGNK 121
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
DL HL V E FA + L F+ETSAL+ TNV+ AF + +Y++V V +
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVV----VTPQT 177
Query: 188 NGTASTLPSKGETINVK--DDSSVLKRIGCC 216
T+P G T+N+ + S V K GCC
Sbjct: 178 READRTVPKPGRTVNMNPGETSEVKKSGGCC 208
>gi|384253262|gb|EIE26737.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 121/171 (70%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKSD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
L H AV+TE+G+ FA++ L F+ETSA A NVE AF +IY+ + +
Sbjct: 123 LTHRRAVTTEEGEQFAKEHGLVFLETSAKTAHNVEEAFINTARKIYEKIEQ 173
>gi|145492543|ref|XP_001432269.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834368|emb|CAI44526.1| rab_B44 [Paramecium tetraurelia]
gi|124399379|emb|CAK64872.1| unnamed protein product [Paramecium tetraurelia]
Length = 212
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 7/213 (3%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++E+ YLFK++LIGDSGVGK+NL +R +F +++ TIGVEF R++R D ++K QI
Sbjct: 4 NDEFSYLFKIILIGDSGVGKTNLFNRLQYKDFQYDTRPTIGVEFLNRTVREDGNLIKCQI 63
Query: 67 WDT--AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
WDT AGQE++RAITSAYYRGA G + YDVT+ TF++ RW+ E++++ D NI++ML+
Sbjct: 64 WDTVKAGQEKFRAITSAYYRGAKGVFVCYDVTKQGTFESTLRWMSEIKQYGDSNIVIMLV 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS-KRAV 183
GNK DL V T++ F +Q + ++ETSAL+ NVE AF +++T+IYKIV ++ +
Sbjct: 124 GNKIDLADQRIVRTDEVSQFCDQNKVGYVETSALNNVNVELAFNQMVTEIYKIVQGQKPI 183
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
G K ET + DSS K++ CC
Sbjct: 184 SQTKLGINDVYVLKKET---QPDSS-KKKMQCC 212
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 121/171 (70%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDNKQIKLQIWDT 63
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H++PN++++LIGNKTD
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARSHSNPNMVIILIGNKTD 123
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
L AV+ E+G+ FA + L FMETSA +ATNVE AF + IY + +
Sbjct: 124 LDSKRAVTREEGEQFARENGLIFMETSAKNATNVEEAFIQTAQAIYSKIQE 174
>gi|349804351|gb|AEQ17648.1| putative member ras oncogene protein 1 [Hymenochirus curtipes]
Length = 116
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/113 (81%), Positives = 105/113 (92%), Gaps = 1/113 (0%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
WDTAGQERYRAITSAYYRGA GALLVYD+ +H T++NV RWL+ELR+H D NI
Sbjct: 65 WDTAGQERYRAITSAYYRGA-GALLVYDIAKHLTYENVERWLKELRDHADNNI 116
>gi|388493968|gb|AFK35050.1| unknown [Medicago truncatula]
Length = 211
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 129/217 (59%), Gaps = 17/217 (7%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + IDNK +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H + N+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS---------K 180
L H AVSTE+G+ FA++ L FME SA NVE AF + IYK +
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTTQNVEEAFIKTAGTIYKKIQDGVFDVSNES 182
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
++ G G PS G D GCCS
Sbjct: 183 YGIKVGYGGIPG--PSGGR------DGPSAAGGGCCS 211
>gi|356570243|ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
Length = 211
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 132/210 (62%), Gaps = 3/210 (1%)
Query: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDT 69
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ID++ +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R+H +PN+ +MLIGNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHANPNMTIMLIGNKCD 122
Query: 130 LRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 189
L H AVS E+G+ FA++ L F+E SA A NVE AF +I + + + + SN
Sbjct: 123 LSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDV-SNE 181
Query: 190 TASTLPSKGETINVKD--DSSVLKRIGCCS 217
+ G D +V R GCCS
Sbjct: 182 SFGIKVGYGRPQGQPGARDGTVSARGGCCS 211
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,111,842,444
Number of Sequences: 23463169
Number of extensions: 111686334
Number of successful extensions: 546381
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16577
Number of HSP's successfully gapped in prelim test: 7942
Number of HSP's that attempted gapping in prelim test: 509724
Number of HSP's gapped (non-prelim): 25287
length of query: 218
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 81
effective length of database: 9,144,741,214
effective search space: 740724038334
effective search space used: 740724038334
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)