BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027824
(218 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/217 (86%), Positives = 206/217 (94%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M GY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++L +D K
Sbjct: 1 MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+N RWL+ELR+HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAV TEDGK+FAE+ESLYFMETSAL+ATNVENAFTEVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
RAVEAG +G++S LPSKG+TINVK+DSSVLKR GCCS
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 201/218 (92%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGYK D+EYDYLFKLVLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFAT+SL ID K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+ GRWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLV VSTEDGKAFAE+ESLYFMETSAL+ATNVENAF+EVLTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
RAVEAG + S +PS+G+TINV +DSSVL R CCSN
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 184/218 (84%), Positives = 202/218 (92%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT++ +++ K
Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRHATF+N RWLRELR HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK DLRHLVAV TE+ KAFAE+ESLYFMETSALDATNVENAFTEVLTQI+KIVSK
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
R+V+ G G ++ LP KGETINVK+D SVLKR+GCCSN
Sbjct: 181 RSVDGG--GESADLPGKGETINVKEDGSVLKRMGCCSN 216
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 178/218 (81%), Positives = 199/218 (91%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFAT+SL IDNK
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T++NV RWL+ELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VMLIGNK+DLRHLVAVST++ K AE+E LYFMETSAL+ATNVENAFTE LTQIY+IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+AVEAG G S+ P KGETIN+KD+ S K+ GCCS+
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/216 (80%), Positives = 201/216 (93%), Gaps = 2/216 (0%)
Query: 2 AGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKV 61
AGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL++D KV
Sbjct: 3 AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIV 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWL+ELR+HTDPNI+V
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122
Query: 122 MLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR 181
ML+GNK+DLRHLVAV T++GKAFAE+ESLYFMETSAL++TNVENAF EVLTQIY+IVSKR
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 182 AVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+VEAG + A + P KGE IN+KDD S +K+ GCCS
Sbjct: 183 SVEAGDD--AGSGPGKGEKINIKDDVSAVKKGGCCS 216
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 365 bits (936), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/218 (79%), Positives = 200/218 (91%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ +++YDYLFK+VLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATR+L++D K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR ATF+NV RWL+EL+ HTDPNI+
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHL+AV TEDGK++AEQESL FMETSAL+ATNVE+AF EVLTQIY+I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ VEAG +G AS +P KGE I VK+D S LK++GCCSN
Sbjct: 181 KQVEAGEDGNAS-VP-KGEKIEVKNDVSALKKLGCCSN 216
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 198/218 (90%), Gaps = 2/218 (0%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D+EYDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATRSL +D+K
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV WL+ELR HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAV TED K+FAE+ESLYFMETSAL+ATNVENAF EVLTQI+ IVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+EA S ++ +PSKG+ I++ D S +K+ GCCSN
Sbjct: 181 KAMEAASE--SANVPSKGDKIDIGKDVSAVKKGGCCSN 216
>sp|Q9SN35|RAA1D_ARATH Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2
SV=1
Length = 214
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 199/218 (91%), Gaps = 4/218 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MAGY+ D++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRSL ++ K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
V+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH+TF+NV RWLRELR+HTDPNI+
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
VML+GNK+DLRHLVAV TED K+FAE ESLYFMETSAL++TNVENAF+EVLTQIY +VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+A+EAG + + +PSKGE I+V D S +K+ GCCSN
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 350 bits (898), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 165/220 (75%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D+K
Sbjct: 1 MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+M +GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVL+QIY++VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + A LP KG+TINV KDD S +K++GCCSN
Sbjct: 181 KALDIGDDPAA--LP-KGQTINVGSKDDVSAVKKVGCCSN 217
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 347 bits (889), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 163/217 (75%), Positives = 197/217 (90%), Gaps = 4/217 (1%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
GY+ +++YDYLFKLVLIGDSGVGKSNLLSRF++NEFNLESKSTIGVEFATRS+R+D+K+V
Sbjct: 4 GYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRH TF+NV RWL+ELR+HTD NI++M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIM 123
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
L+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL++ NVENAFTEVLT+IYK+V ++A
Sbjct: 124 LVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKA 183
Query: 183 VEAGSNGTASTLPSKGETINV-KDDSSVLKRIGCCSN 218
+E G + A LP KG+TINV KDD S +K++GCCS+
Sbjct: 184 LEVGDDPAA--LP-KGQTINVGKDDVSAVKKVGCCSS 217
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 343 bits (881), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
MA Y+ D++YD+L+K+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+ +D K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HT+ NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AVSTED KAFAE+E+ +FMETSAL+A NVENAFTEVL+QIY++ SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCSN 218
+A++ G + T TLP KG++INV KDD S +K++GCCS+
Sbjct: 181 KALDIGDDHT--TLP-KGQSINVGSKDDVSEVKKVGCCSS 217
>sp|Q9S810|RAA1I_ARATH Ras-related protein RABA1i OS=Arabidopsis thaliana GN=RABA1I PE=2
SV=1
Length = 218
Score = 332 bits (851), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/219 (71%), Positives = 194/219 (88%), Gaps = 4/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ +++YDYLFK+VL GDSGVGKSNLLSRFT+N+F+ +S++TIGVEFATRS++ D+K
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD NI+
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL A+STE+ KAFAE+E+ +FMETSAL+A NV+NAFTEVLTQIY++VSK
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A+EAG + T + LP KG+ INV +DD S +K+ GCCS
Sbjct: 181 KALEAGDDPT-TALP-KGQMINVGGRDDISAVKKPGCCS 217
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 328 bits (842), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 151/219 (68%), Positives = 191/219 (87%), Gaps = 5/219 (2%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M Y+ D++YDYLFKLVLIGDSGVGKSNLLSRFT+NEF++ESKSTIGVEFATRS+ +D K
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
++KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH TF+NV RWL+ELR+HTD N++
Sbjct: 61 IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DLRHL AV TE+ ++F+E+E+++FMETSALDATNVE AFT VLTQIY+++S+
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A++ G +LP KG+TI++ KDD + +K GCCS
Sbjct: 181 KALDG--TGDPMSLP-KGQTIDIGNKDDVTAVKSSGCCS 216
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 325 bits (834), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 154/219 (70%), Positives = 192/219 (87%), Gaps = 4/219 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M YK +++YDYLFK+VL GDSGVGKSNLLSRFT+N+F+ +S+STIGVEFATRS+++D+K
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TF+NV RWL+ELR+HTD N +
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK DL HL A+STE+ K FAE+E+ +FMETSAL+A NVENAFTEVLTQIY++VSK
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180
Query: 181 RAVEAGSNGTASTLPSKGETINV--KDDSSVLKRIGCCS 217
+A++AG + T + LP KG+ INV +DD S +K+ GCC+
Sbjct: 181 KALDAGDDPT-TALP-KGQMINVGSRDDVSAVKKSGCCA 217
>sp|Q40193|RB11C_LOTJA Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1
Length = 216
Score = 308 bits (788), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 176/214 (82%), Gaps = 1/214 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
GNK+DL HL AVS +DG A +E+E L F+ETSAL+ATN+E AF +LT+IY IVSK+A+
Sbjct: 123 AGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A +++P +G TINV D S K+ GCCS
Sbjct: 183 AAQEATAGASVPGQGTTINVADTSGNTKK-GCCS 215
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 306 bits (784), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 176/213 (82%), Gaps = 3/213 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKA
Sbjct: 4 RVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMA 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL AVS EDG+A AE+E L F+ETSAL+A N+E AF +LT+IY I+SK+A+
Sbjct: 124 GNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A +S LP +G TINV D S+ +R CCS
Sbjct: 184 A--QEASSNLPGQGTTINVADASANQRR-SCCS 213
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 303 bits (776), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 175/213 (82%), Gaps = 3/213 (1%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKA
Sbjct: 4 RIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWLRELR+H D NI++M+
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMA 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL HL +V+ EDG++ AE+E L F+ETSAL+ATN+E AF +L++IY I+SK+A+
Sbjct: 124 GNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKALA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A A LP +G IN+ DSS R GCCS
Sbjct: 184 AQE--AAGNLPGQGTAINIS-DSSATNRKGCCS 213
>sp|O04486|RAA2A_ARATH Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2
SV=1
Length = 217
Score = 302 bits (774), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 141/214 (65%), Positives = 180/214 (84%), Gaps = 1/214 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+PDEEYDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR+L+++ + VKA
Sbjct: 4 RPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWL+ELR+H D NI++MLI
Sbjct: 64 QIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLI 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNKTDL+HL AV+TED +++AE+E L F+ETSAL+A NVE AF +L+++Y+I+SK+++
Sbjct: 124 GNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSI- 182
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ TA+ +G+TI+V S + CCS+
Sbjct: 183 SSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 299 bits (765), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 138/197 (70%), Positives = 172/197 (87%), Gaps = 3/197 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
++EYDYLFK VLIGDSGVGKSNLL RFT+NEFN+ESKSTIGVEFATR++ +DNK +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ ++F NVGRWL+ELREH D NI++ML+GN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGN 123
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
KTDL HL AVSTE+ +AFA + +L F+ETSA+DA+NVE AF VLT+I++IVS R++EAG
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAG 183
Query: 187 SNGTASTLPSKGETINV 203
+G P+ G+T+N+
Sbjct: 184 DDGVH---PTAGQTLNI 197
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 296 bits (757), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 176/219 (80%), Gaps = 10/219 (4%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
+KPD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATRS+++D K +K
Sbjct: 3 HKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR+H D NI++ML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIML 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
+GNK+DL+HL V TE +AF E+E L F+ETSAL++TNVE AF ++LT+IY IVSK+ +
Sbjct: 123 VGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVL 182
Query: 184 EAGSNGTASTLPSKGE-----TINVKDDSSVLKRIGCCS 217
++ N P GE I+ D K+ GCCS
Sbjct: 183 DSEDN-----RPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>sp|Q40523|RB11A_TOBAC Ras-related protein Rab11A OS=Nicotiana tabacum GN=RAB11A PE=2 SV=1
Length = 216
Score = 295 bits (755), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 175/213 (82%), Gaps = 1/213 (0%)
Query: 5 KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKA 64
+ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+L+++ K VKA
Sbjct: 4 RVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLI 124
QIWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF NV RWLRELR+H D NI+++L
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVIILA 123
Query: 125 GNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 184
GNK+DL+HL AVS +D +A ++E L F+ETSAL+A NV+ AF +LT IY I+SK+A+
Sbjct: 124 GNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKALA 183
Query: 185 AGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
A ++ LP +G TINV D+S+ +KR GCCS
Sbjct: 184 AQEAAASTALPGQGTTINVSDNSANVKR-GCCS 215
>sp|P62494|RB11A_RAT Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1
SV=3
Length = 216
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>sp|P62493|RB11A_RABIT Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2
SV=3
Length = 216
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>sp|Q5R9M7|RB11A_PONAB Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3
Length = 216
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>sp|Q52NJ1|RB11A_PIG Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3
Length = 216
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>sp|P62492|RB11A_MOUSE Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3
Length = 216
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>sp|P62491|RB11A_HUMAN Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3
Length = 216
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>sp|P62490|RB11A_CANFA Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3
Length = 216
Score = 293 bits (749), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>sp|O35509|RB11B_RAT Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2
SV=4
Length = 218
Score = 292 bits (747), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>sp|Q15907|RB11B_HUMAN Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4
Length = 218
Score = 292 bits (747), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>sp|Q3MHP2|RB11B_BOVIN Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3
Length = 218
Score = 292 bits (747), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 AAHDESPGNNVVDISVPPTT-------DGQKPNKLQCCQN 217
>sp|Q5ZJN2|RB11A_CHICK Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1
Length = 216
Score = 292 bits (747), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 172/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKMQCCQN 215
>sp|Q9FIF9|RAA2D_ARATH Ras-related protein RABA2d OS=Arabidopsis thaliana GN=RABA2D PE=2
SV=1
Length = 217
Score = 292 bits (747), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 172/215 (80%), Gaps = 2/215 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ +++YDYLFK+VLIGDSGVGK+N+LSRFT+NEF LESKSTIGVEFATR+L+++ K VK
Sbjct: 3 HRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR-A 182
GNK DL HL +V+ EDG+ AE E L F+ETSAL+ATNVE AF VL +IY I+SK+
Sbjct: 123 AGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKAL 182
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCS 217
+ S +P +G TINV+D S KR GCCS
Sbjct: 183 AAQEAAAANSAIPGQGTTINVEDTSGAGKR-GCCS 216
>sp|P22129|RB11B_DIPOM Ras-related protein Rab-11B OS=Diplobatis ommata PE=2 SV=1
Length = 218
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 15/220 (6%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--- 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 184 -----EAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
G+N ++P D ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTT-------DGQKSNKLQCCQN 217
>sp|Q2TA29|RB11A_BOVIN Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3
Length = 216
Score = 291 bits (745), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 171/213 (80%), Gaps = 3/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG 186
K+DLRHL AV T++ +AFAE+ L F+ETSALD TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 SNGTASTLPSKGET-INVKDDSSVLKRIGCCSN 218
S PS I+V + ++ CC N
Sbjct: 185 RENDMS--PSNNVVPIHVPPTTENKPKVQCCQN 215
>sp|Q96283|RAA2C_ARATH Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2
SV=4
Length = 217
Score = 291 bits (745), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 173/216 (80%), Gaps = 2/216 (0%)
Query: 4 YKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVK 63
++ D+EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEFATR+ +++ K +K
Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF NV RWLRELR+H D NI++M+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 124 IGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR-A 182
GNK+DL HL +V+ EDG++ AE+E L F+ETSAL+ATNVE AF +L +IY I+SK+
Sbjct: 123 AGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKAL 182
Query: 183 VEAGSNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
+ S +P +G TINV D S KR CCS+
Sbjct: 183 AAQEAAAANSAIPGQGTTINVDDTSGGAKR-ACCSS 217
>sp|P46638|RB11B_MOUSE Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3
Length = 218
Score = 290 bits (742), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 161/177 (90%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
D+EYDYLFK+VLIGDSGVGKSNLLSRFT+NEFNLESKSTIGVEFATRS+++D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H T++NV RWL+ELR+H D NI++ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV 183
K+DLRHL AV T++ +AFAE+ +L F+ETSALD+TNVE AF +LT+IY+IVS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>sp|Q40723|RLGP2_ORYSJ Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2
PE=2 SV=2
Length = 217
Score = 282 bits (722), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/216 (62%), Positives = 177/216 (81%), Gaps = 2/216 (0%)
Query: 3 GYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVV 62
G + D EY YLFK+VLIGDSGVGKSN+LSRFT+N F+L+SKSTIGVEFAT+SL+++ K +
Sbjct: 2 GGRVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F NV RWLRELR+H D +I++M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIM 121
Query: 123 LIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRA 182
++GNK+DL HL AVS ++GKA AE+E L+F+ETSA++A NVE AF ++T++Y IV+++A
Sbjct: 122 MVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKA 181
Query: 183 VEAGSNGTAST-LPSKGETINVKDDSSVLKRIGCCS 217
+ A AS LPS+G+TI++ + KR CCS
Sbjct: 182 LAAKEAAAASAPLPSQGKTISIDSAAGNTKR-ACCS 216
>sp|P36412|RB11A_DICDI Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A
PE=1 SV=1
Length = 214
Score = 273 bits (697), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 169/217 (77%), Gaps = 4/217 (1%)
Query: 1 MAGYKPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
M EEYDYL+K+VLIGDSGVGKSNLLSRFT+NEF+LE+KSTIGVEFATR+++ + K
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 60
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+ + AT+++V RW+ ELRE+ D NI
Sbjct: 61 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIE 120
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
+ML+GNK+DLRHL VST++ K F+E+ L F+ETSALD++NVE AF +LTQIY I+S+
Sbjct: 121 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSR 180
Query: 181 RAVEAGSNGTASTLPSKGETINVKDDS-SVLKRIGCC 216
+ S G +T+ S ETI + S + GCC
Sbjct: 181 ---PSHSTGPQTTIDSNTETIILPTTSEPPAAKSGCC 214
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 271 bits (692), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 133/213 (62%), Positives = 168/213 (78%), Gaps = 4/213 (1%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGKS LL+RF++NEF++ESK+TIGVEF TR+L ID K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR---AV 183
KTDL L AV TED K FA++E+L+FMETSALD+ NVE +F VLT+IY+IVSK+ A
Sbjct: 129 KTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVAN 188
Query: 184 EAGSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
E G +G S+L +G I V + + K GCC
Sbjct: 189 EEGESGGDSSLL-QGTKIVVAGEETESKGKGCC 220
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 268 bits (685), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 166/214 (77%), Gaps = 7/214 (3%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS LL+RF +NEFNL+SK+TIGVEF TR+L ID + VKAQIW
Sbjct: 13 QKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F +V RWL ELR H D NI++MLIGNK
Sbjct: 73 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNK 132
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---- 183
+DL L V TED K FAE+E+L+FMETSAL++TNVENAF VLT+IY+IVSK+ +
Sbjct: 133 SDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE 192
Query: 184 EAGSNGTASTLPSKGETINVK-DDSSVLKRIGCC 216
E S+G +S L KG I V + + + CC
Sbjct: 193 EVDSSGNSSLL--KGTKIVVPGQEPAPPTKASCC 224
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 169/213 (79%), Gaps = 5/213 (2%)
Query: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQI 66
+++ DY+FK+VLIGDS VGK+ LL+RF +NEF+++SK+TIGVEF T++L IDNK VKAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F ++ +WL ELR H D NI++MLIGN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGN 128
Query: 127 KTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEA- 185
K DL L AV TED + FA++E+L+FMETSAL+ATNVE AF +LT+IY+I+SK+++ A
Sbjct: 129 KCDLGSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTAD 188
Query: 186 --GSNGTASTLPSKGETINVKDDSSVLKRIGCC 216
++G +S L KG I + + KR GCC
Sbjct: 189 DDDADGNSSLL--KGTRIIIPSEQESGKRGGCC 219
>sp|Q40191|RB11A_LOTJA Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1
Length = 226
Score = 263 bits (672), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 162/209 (77%), Gaps = 3/209 (1%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS +L+RF +NEF+L+SKSTIGVEF TR+L ID+K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI+++LIGNK DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDL 134
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV---EAGS 187
+ V TED K FAE+E L+F+ETSAL+ATNVE+AFT VLT+IY IV+K+++ E+
Sbjct: 135 VNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQG 194
Query: 188 NGTASTLPSKGETINVKDDSSVLKRIGCC 216
NG +++L + I KR CC
Sbjct: 195 NGNSASLSGQKIIIPGPAQEIPAKRNMCC 223
>sp|Q40522|RB11D_TOBAC Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1
Length = 222
Score = 260 bits (665), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 127/215 (59%), Positives = 167/215 (77%), Gaps = 6/215 (2%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGKS +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIW 69
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI++MLIGNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNK 129
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG- 186
TDL AV TED K FA++E L+F+ETSA++ATN+E+AF VLT+I+ IV+K+ + A
Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADD 189
Query: 187 --SNGTASTLPSKGETINVKDDSSVL-KRIGCCSN 218
SNG ++L G+ I V V+ ++ CCS+
Sbjct: 190 NQSNGNPASL--TGKKILVPGPGQVIPEKKACCSS 222
>sp|Q9FJN8|RAA4A_ARATH Ras-related protein RABA4a OS=Arabidopsis thaliana GN=RABA4A PE=2
SV=1
Length = 226
Score = 257 bits (656), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/229 (55%), Positives = 168/229 (73%), Gaps = 19/229 (8%)
Query: 2 AGY-KPDEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNK 60
GY P ++ DY+FK+VLIGDS VGKS +L+R+ ++EF+L+SK+TIGVEF TR+L ID+K
Sbjct: 5 GGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHK 64
Query: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNII 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+TR TF ++ RWL ELR H D NI+
Sbjct: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIV 124
Query: 121 VMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSK 180
++LIGNK+DL A+ TED K FAE+E L+F+ETSA +ATNVE+AF+ VLT+I+ IV+K
Sbjct: 125 IILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNK 184
Query: 181 RAVEAG---SNGTASTL--------PSKGETINVKDDSSVLKRIGCCSN 218
+++ A NG +L P G+ I K + CC++
Sbjct: 185 KSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNM-------CCNS 226
>sp|P38555|YPT31_YEAST GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
Length = 223
Score = 256 bits (655), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/216 (59%), Positives = 165/216 (76%), Gaps = 9/216 (4%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YD LFK+VLIGDSGVGKSNLLSRFTKNEFN++SKSTIGVEFATR+L ID K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAG-- 186
DL HL AV TE+ K FA++ L F ETSAL++ NV+ AF E++ IY+ VSK ++ G
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 187 -SNGTA--STLPSKGETINVKDDSSVLKRI---GCC 216
+NG A ++ P+ G TI++ + K+ CC
Sbjct: 189 SANGNANGASAPN-GPTISLTPTPNENKKANGNNCC 223
>sp|Q9SMQ6|RAA4B_ARATH Ras-related protein RABA4b OS=Arabidopsis thaliana GN=RABA4B PE=2
SV=1
Length = 224
Score = 256 bits (655), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 161/216 (74%), Gaps = 15/216 (6%)
Query: 11 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF ++EF+++SK+TIGVEF TR+L I+ K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL ELR H D NI+++LIGNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKR--AVEAGSN 188
AV TED K FAE+E L+F+ETSAL+ATNVEN+F ++TQIY V+K+ A E SN
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 189 GTAS------TLPSKGETINVKDDSSVLKRIGCCSN 218
S +P G+ I K + CC++
Sbjct: 195 NPGSLAGKKILIPGSGQEIPAKTST-------CCTS 223
>sp|P51996|YPT32_YEAST GTP-binding protein YPT32/YPT11 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YPT32 PE=1 SV=3
Length = 222
Score = 256 bits (654), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 164/215 (76%), Gaps = 8/215 (3%)
Query: 9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFT +EFN+ESKSTIGVEFATR++ ++NK +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKT 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++++N WL ELRE+ D N+ V LIGNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE---A 185
DL HL AV T++ K FA + + F ETSAL++ NV+ AF E++ I+++VSK V+ +
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 186 GSNGTASTLPSKGETINV----KDDSSVLKRIGCC 216
G+N S KG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKEDKKK-KSSNCC 222
>sp|Q40520|RB11C_TOBAC Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1
Length = 222
Score = 254 bits (649), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 123/213 (57%), Positives = 162/213 (76%), Gaps = 2/213 (0%)
Query: 8 EEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIW 67
++ DY+FK+VLIGDS VGK+ +L+RF +NEF+L+SK+TIGVEF TR+L I +K VKAQIW
Sbjct: 10 QKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIW 69
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNK 127
DTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF ++ RWL ELR H D NI++ML GNK
Sbjct: 70 DTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNK 129
Query: 128 TDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 187
TDL AV TED K FA++E L+F+ETSA++AT +E+AF VLT+I+ IV+K+ + A
Sbjct: 130 TDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADE 189
Query: 188 NGTASTLPS-KGETINVKDDSSVLK-RIGCCSN 218
N + S S G+ I V V+ + CCS+
Sbjct: 190 NQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
>sp|Q9FGK5|RAA5A_ARATH Ras-related protein RABA5a OS=Arabidopsis thaliana GN=RABA5A PE=2
SV=1
Length = 221
Score = 251 bits (640), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/229 (54%), Positives = 163/229 (71%), Gaps = 19/229 (8%)
Query: 1 MAGYKPDEEY-DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDN 59
MA Y D++ DYLFK+VLIGDS VGKSNLL+RF ++EF SKSTIGVEF T+ + I+
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++GRWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 120 IVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVS 179
+ +L+GNK+DL+ L VST +GKA AE + L+FMETSALD++NV AF V+ +IY I+S
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 KRAVEAG----------SNGTASTLPSKGETINVKDDSSVLKRIGCCSN 218
++ + + SNG +PS G+ K+ GCCS+
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVIPSDGQ--------GEFKKGGCCSS 221
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,824,459
Number of Sequences: 539616
Number of extensions: 2682675
Number of successful extensions: 15756
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 331
Number of HSP's that attempted gapping in prelim test: 13896
Number of HSP's gapped (non-prelim): 1267
length of query: 218
length of database: 191,569,459
effective HSP length: 113
effective length of query: 105
effective length of database: 130,592,851
effective search space: 13712249355
effective search space used: 13712249355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)