Query 027828
Match_columns 218
No_of_seqs 141 out of 1513
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 15:49:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027828.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027828hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13561 adh_short_C2: Enoyl-( 100.0 2.8E-40 6.1E-45 256.2 15.8 206 1-218 26-237 (241)
2 PRK08339 short chain dehydroge 100.0 1E-38 2.2E-43 250.5 21.1 208 1-218 38-255 (263)
3 PRK06079 enoyl-(acyl carrier p 100.0 1.5E-38 3.4E-43 248.0 21.3 203 2-218 40-246 (252)
4 PRK06505 enoyl-(acyl carrier p 100.0 2.6E-38 5.6E-43 249.1 22.0 205 2-218 40-248 (271)
5 KOG1200 Mitochondrial/plastidi 100.0 6E-39 1.3E-43 229.8 15.3 207 2-218 45-251 (256)
6 PRK08415 enoyl-(acyl carrier p 100.0 3.3E-38 7.1E-43 248.8 20.6 188 19-218 55-246 (274)
7 PRK07370 enoyl-(acyl carrier p 100.0 4E-38 8.8E-43 246.5 20.9 201 7-218 46-250 (258)
8 PRK12481 2-deoxy-D-gluconate 3 100.0 9.5E-38 2E-42 243.5 22.3 202 9-218 44-245 (251)
9 PRK08690 enoyl-(acyl carrier p 100.0 7E-38 1.5E-42 245.5 21.2 202 7-218 43-249 (261)
10 PRK06603 enoyl-(acyl carrier p 100.0 7.3E-38 1.6E-42 245.3 21.2 204 2-218 41-249 (260)
11 PRK07063 short chain dehydroge 100.0 4.1E-37 8.8E-42 241.0 23.3 209 1-218 37-251 (260)
12 PRK05867 short chain dehydroge 100.0 6E-37 1.3E-41 239.2 22.4 207 1-218 39-247 (253)
13 PRK06997 enoyl-(acyl carrier p 100.0 2.9E-37 6.2E-42 241.9 20.3 186 22-218 58-248 (260)
14 PRK07984 enoyl-(acyl carrier p 100.0 4.4E-37 9.5E-42 240.9 21.1 205 2-218 39-248 (262)
15 PRK08594 enoyl-(acyl carrier p 100.0 2.8E-37 6.2E-42 241.5 19.9 202 4-218 45-250 (257)
16 PRK07533 enoyl-(acyl carrier p 100.0 5.8E-37 1.3E-41 239.9 21.2 187 21-218 61-251 (258)
17 PRK08159 enoyl-(acyl carrier p 100.0 7.8E-37 1.7E-41 240.8 21.0 187 21-218 61-251 (272)
18 COG4221 Short-chain alcohol de 100.0 1E-36 2.2E-41 227.6 20.3 191 1-205 36-228 (246)
19 PRK08085 gluconate 5-dehydroge 100.0 1.7E-36 3.8E-41 236.7 22.5 209 1-218 39-247 (254)
20 PRK07478 short chain dehydroge 100.0 2.1E-36 4.6E-41 236.2 22.6 209 1-218 36-246 (254)
21 PRK08340 glucose-1-dehydrogena 100.0 1.7E-36 3.7E-41 237.4 21.9 209 1-218 30-250 (259)
22 KOG0725 Reductases with broad 100.0 3.1E-36 6.8E-41 235.3 21.3 209 1-218 38-258 (270)
23 PRK06114 short chain dehydroge 100.0 7.3E-36 1.6E-40 233.2 22.6 207 2-218 39-248 (254)
24 PRK07062 short chain dehydroge 100.0 8.3E-36 1.8E-40 234.2 22.8 209 1-218 38-258 (265)
25 PRK08589 short chain dehydroge 100.0 9.3E-36 2E-40 234.9 22.1 206 2-218 37-249 (272)
26 PRK08993 2-deoxy-D-gluconate 3 100.0 7.3E-36 1.6E-40 233.1 21.1 202 9-218 46-247 (253)
27 PRK08416 7-alpha-hydroxysteroi 100.0 8.7E-36 1.9E-40 233.5 21.0 207 3-218 41-254 (260)
28 PLN02730 enoyl-[acyl-carrier-p 100.0 6.4E-36 1.4E-40 237.4 20.1 206 2-218 41-283 (303)
29 PRK12859 3-ketoacyl-(acyl-carr 100.0 3.1E-35 6.7E-40 230.0 23.6 200 5-218 53-252 (256)
30 PRK06935 2-deoxy-D-gluconate 3 100.0 2.7E-35 5.8E-40 230.5 22.3 207 2-218 46-252 (258)
31 PRK07985 oxidoreductase; Provi 100.0 2.8E-35 6.1E-40 234.4 22.6 204 4-218 84-288 (294)
32 PRK08277 D-mannonate oxidoredu 100.0 3.4E-35 7.4E-40 232.3 22.6 208 2-218 41-269 (278)
33 PRK07889 enoyl-(acyl carrier p 100.0 1.3E-35 2.8E-40 232.1 19.9 198 6-218 46-248 (256)
34 PRK07523 gluconate 5-dehydroge 100.0 4.1E-35 8.9E-40 229.1 22.0 208 2-218 41-248 (255)
35 PRK12747 short chain dehydroge 100.0 8E-35 1.7E-39 227.1 22.6 205 3-218 37-247 (252)
36 PRK07791 short chain dehydroge 100.0 5.6E-35 1.2E-39 231.9 21.9 204 5-218 49-254 (286)
37 PRK06172 short chain dehydroge 100.0 1E-34 2.2E-39 226.6 22.6 209 1-218 37-247 (253)
38 PRK08643 acetoin reductase; Va 100.0 1.2E-34 2.7E-39 226.5 22.9 209 2-218 33-250 (256)
39 PRK07831 short chain dehydroge 100.0 1.7E-34 3.7E-39 226.5 23.3 208 2-218 49-258 (262)
40 PRK07677 short chain dehydroge 100.0 2.2E-34 4.7E-39 224.6 23.2 210 2-218 32-242 (252)
41 PRK06940 short chain dehydroge 100.0 1.1E-34 2.4E-39 229.0 21.8 199 1-218 30-260 (275)
42 PRK06128 oxidoreductase; Provi 100.0 2.2E-34 4.8E-39 230.0 22.8 203 5-218 91-294 (300)
43 PRK08936 glucose-1-dehydrogena 100.0 4.8E-34 1E-38 223.8 23.7 207 4-218 41-247 (261)
44 PRK07035 short chain dehydroge 100.0 4.4E-34 9.5E-39 222.8 23.0 209 1-218 38-247 (252)
45 PRK09242 tropinone reductase; 100.0 4.6E-34 1E-38 223.4 22.5 209 1-218 39-249 (257)
46 COG0300 DltE Short-chain dehyd 100.0 2.2E-34 4.9E-39 220.7 20.1 190 1-205 36-226 (265)
47 PRK08265 short chain dehydroge 100.0 4.4E-34 9.5E-39 224.0 22.0 203 2-218 37-241 (261)
48 PRK06124 gluconate 5-dehydroge 100.0 7.2E-34 1.6E-38 222.1 22.7 209 1-218 41-249 (256)
49 TIGR01832 kduD 2-deoxy-D-gluco 100.0 9.4E-34 2E-38 220.4 22.6 203 8-218 40-242 (248)
50 PRK06113 7-alpha-hydroxysteroi 100.0 1.4E-33 2.9E-38 220.5 23.5 206 2-218 42-247 (255)
51 PRK08303 short chain dehydroge 100.0 1.8E-34 4E-39 230.5 18.7 202 5-216 52-265 (305)
52 KOG1207 Diacetyl reductase/L-x 100.0 2.4E-36 5.3E-41 212.9 5.9 203 1-218 37-239 (245)
53 PRK07097 gluconate 5-dehydroge 100.0 1.8E-33 3.9E-38 221.0 22.9 208 2-218 41-254 (265)
54 PRK06125 short chain dehydroge 100.0 1.3E-33 2.9E-38 221.0 21.7 205 1-218 37-250 (259)
55 PRK12743 oxidoreductase; Provi 100.0 3.7E-33 8E-38 218.2 23.6 206 3-218 35-240 (256)
56 PRK06300 enoyl-(acyl carrier p 100.0 8.4E-34 1.8E-38 225.2 20.1 175 33-218 104-282 (299)
57 PRK06200 2,3-dihydroxy-2,3-dih 100.0 1.1E-33 2.5E-38 221.9 20.0 203 2-218 37-254 (263)
58 PRK06463 fabG 3-ketoacyl-(acyl 100.0 3.3E-33 7.2E-38 218.3 21.4 189 21-218 52-244 (255)
59 PRK06398 aldose dehydrogenase; 100.0 5.3E-33 1.1E-37 217.6 22.5 188 21-218 45-241 (258)
60 PRK06484 short chain dehydroge 100.0 3E-33 6.5E-38 239.0 21.7 203 2-218 300-504 (520)
61 PRK08226 short chain dehydroge 100.0 6.9E-33 1.5E-37 217.4 22.0 207 2-218 37-250 (263)
62 PRK06949 short chain dehydroge 100.0 2.2E-32 4.7E-37 213.9 23.9 216 1-218 39-254 (258)
63 TIGR01831 fabG_rel 3-oxoacyl-( 100.0 1.5E-32 3.3E-37 212.5 22.3 204 3-218 31-235 (239)
64 PRK07856 short chain dehydroge 100.0 1.1E-32 2.4E-37 215.0 21.4 191 19-218 46-236 (252)
65 PRK08063 enoyl-(acyl carrier p 100.0 2.4E-32 5.3E-37 212.7 22.9 208 2-218 36-243 (250)
66 PRK12823 benD 1,6-dihydroxycyc 100.0 2E-32 4.3E-37 214.5 22.5 205 2-218 39-255 (260)
67 TIGR02415 23BDH acetoin reduct 100.0 2.9E-32 6.2E-37 212.7 22.2 209 2-218 31-248 (254)
68 TIGR01500 sepiapter_red sepiap 100.0 8.9E-33 1.9E-37 216.0 19.3 208 1-216 34-253 (256)
69 KOG1205 Predicted dehydrogenas 100.0 3.3E-33 7.1E-38 215.9 16.5 160 1-170 42-205 (282)
70 PRK07067 sorbitol dehydrogenas 100.0 3E-32 6.6E-37 213.1 22.2 206 2-218 37-251 (257)
71 PRK12938 acetyacetyl-CoA reduc 100.0 5.2E-32 1.1E-36 210.4 23.2 206 2-218 35-240 (246)
72 PRK06841 short chain dehydroge 100.0 4.5E-32 9.8E-37 211.8 22.2 204 2-218 46-249 (255)
73 PRK07576 short chain dehydroge 100.0 5.2E-32 1.1E-36 212.6 22.2 207 2-218 40-247 (264)
74 PRK08642 fabG 3-ketoacyl-(acyl 100.0 9.1E-32 2E-36 209.7 23.1 203 3-218 38-247 (253)
75 PLN02253 xanthoxin dehydrogena 100.0 3.5E-32 7.7E-37 215.3 21.1 207 2-218 49-266 (280)
76 TIGR03325 BphB_TodD cis-2,3-di 100.0 1.9E-32 4.1E-37 214.9 18.5 203 2-218 36-252 (262)
77 PRK05872 short chain dehydroge 100.0 6.8E-32 1.5E-36 215.2 21.0 202 1-213 39-242 (296)
78 PRK12384 sorbitol-6-phosphate 100.0 1.9E-31 4.1E-36 208.8 22.3 209 2-218 33-253 (259)
79 PRK07890 short chain dehydroge 100.0 1.5E-31 3.3E-36 209.1 21.1 207 2-218 36-252 (258)
80 PRK06171 sorbitol-6-phosphate 100.0 4.8E-32 1E-36 213.0 18.1 189 21-218 50-260 (266)
81 PRK12939 short chain dehydroge 100.0 5.6E-31 1.2E-35 204.9 23.1 207 2-218 38-244 (250)
82 PRK07814 short chain dehydroge 100.0 6.4E-31 1.4E-35 206.3 23.2 209 1-218 40-248 (263)
83 TIGR03206 benzo_BadH 2-hydroxy 100.0 4.9E-31 1.1E-35 205.3 22.4 208 2-218 34-245 (250)
84 KOG1201 Hydroxysteroid 17-beta 100.0 1.3E-31 2.7E-36 205.4 18.5 183 2-203 69-253 (300)
85 PRK12937 short chain dehydroge 100.0 6.1E-31 1.3E-35 204.1 22.8 203 4-218 39-241 (245)
86 PRK07069 short chain dehydroge 100.0 4.4E-31 9.5E-36 205.7 22.0 208 2-218 30-245 (251)
87 PRK06500 short chain dehydroge 100.0 4.8E-31 1E-35 205.2 22.1 203 2-218 37-243 (249)
88 PRK06483 dihydromonapterin red 100.0 4.1E-31 8.8E-36 204.2 21.3 183 22-218 48-230 (236)
89 PRK08862 short chain dehydroge 100.0 3.2E-31 6.9E-36 203.6 20.4 188 1-216 35-224 (227)
90 PRK12748 3-ketoacyl-(acyl-carr 100.0 7.1E-31 1.5E-35 205.3 22.7 194 11-218 58-251 (256)
91 PRK06947 glucose-1-dehydrogena 100.0 1.1E-30 2.3E-35 203.2 23.2 210 2-218 34-245 (248)
92 PRK06701 short chain dehydroge 100.0 1.1E-30 2.3E-35 207.7 22.9 205 2-218 77-283 (290)
93 PRK08213 gluconate 5-dehydroge 100.0 1.5E-30 3.3E-35 203.7 23.2 207 1-218 42-253 (259)
94 PRK05717 oxidoreductase; Valid 100.0 1.7E-30 3.6E-35 203.1 22.5 202 2-218 41-244 (255)
95 PRK06123 short chain dehydroge 100.0 3E-30 6.5E-35 200.7 23.6 209 3-218 35-245 (248)
96 PRK06139 short chain dehydroge 100.0 1.4E-30 2.9E-35 210.1 22.1 191 1-205 37-228 (330)
97 PRK06484 short chain dehydroge 100.0 7.4E-31 1.6E-35 224.3 21.7 205 2-218 36-244 (520)
98 PRK12744 short chain dehydroge 100.0 8.7E-31 1.9E-35 204.9 20.3 204 3-218 44-251 (257)
99 PRK08278 short chain dehydroge 100.0 1.3E-30 2.8E-35 205.7 20.9 192 7-216 49-243 (273)
100 PRK06523 short chain dehydroge 100.0 1.5E-30 3.2E-35 203.9 21.1 189 21-218 50-253 (260)
101 PRK08628 short chain dehydroge 100.0 1.5E-30 3.2E-35 203.6 20.8 205 2-218 38-247 (258)
102 PRK08220 2,3-dihydroxybenzoate 100.0 1.5E-30 3.2E-35 202.9 20.7 191 19-218 47-245 (252)
103 PRK12824 acetoacetyl-CoA reduc 100.0 3.3E-30 7.2E-35 200.0 22.5 200 8-218 40-239 (245)
104 TIGR02685 pter_reduc_Leis pter 100.0 2.6E-30 5.6E-35 203.3 21.8 209 3-218 34-259 (267)
105 PRK12936 3-ketoacyl-(acyl-carr 100.0 3.7E-30 8.1E-35 199.7 22.0 203 2-218 37-239 (245)
106 PRK05599 hypothetical protein; 100.0 1.7E-30 3.8E-35 202.0 20.1 185 1-206 29-214 (246)
107 PRK07792 fabG 3-ketoacyl-(acyl 100.0 3.2E-30 7E-35 206.5 21.7 205 4-218 46-251 (306)
108 PRK07231 fabG 3-ketoacyl-(acyl 100.0 6.5E-30 1.4E-34 199.0 22.5 208 1-218 35-245 (251)
109 PRK06198 short chain dehydroge 100.0 7.4E-30 1.6E-34 199.8 22.4 210 1-218 37-251 (260)
110 PRK12935 acetoacetyl-CoA reduc 100.0 9.1E-30 2E-34 197.9 22.7 204 3-218 39-242 (247)
111 TIGR01829 AcAcCoA_reduct aceto 100.0 1.2E-29 2.5E-34 196.6 23.2 204 4-218 34-237 (242)
112 PLN00015 protochlorophyllide r 100.0 6.1E-30 1.3E-34 205.1 22.0 209 2-216 29-274 (308)
113 PRK09186 flagellin modificatio 100.0 1E-29 2.2E-34 198.6 21.7 202 2-218 35-251 (256)
114 PRK12742 oxidoreductase; Provi 100.0 1E-29 2.2E-34 196.4 21.4 192 4-218 40-232 (237)
115 PRK06138 short chain dehydroge 100.0 2.2E-29 4.7E-34 196.2 22.7 208 1-218 35-246 (252)
116 PRK05875 short chain dehydroge 100.0 2.3E-29 5.1E-34 198.7 22.9 208 2-218 38-248 (276)
117 COG0623 FabI Enoyl-[acyl-carri 100.0 6.3E-30 1.4E-34 188.1 17.9 201 7-218 43-247 (259)
118 PRK05884 short chain dehydroge 100.0 5.5E-30 1.2E-34 196.3 18.1 179 2-218 31-215 (223)
119 PRK06057 short chain dehydroge 100.0 1.6E-29 3.4E-34 197.6 20.7 203 2-218 38-244 (255)
120 PRK13394 3-hydroxybutyrate deh 100.0 1.9E-29 4.2E-34 197.6 21.1 208 2-218 38-256 (262)
121 PRK12746 short chain dehydroge 100.0 4.6E-29 1E-33 194.7 22.5 205 2-217 38-248 (254)
122 PRK12429 3-hydroxybutyrate deh 100.0 5.2E-29 1.1E-33 194.7 22.7 209 1-218 34-252 (258)
123 PRK07109 short chain dehydroge 100.0 1.9E-29 4E-34 204.2 20.2 193 1-206 38-231 (334)
124 PRK06550 fabG 3-ketoacyl-(acyl 100.0 1.5E-29 3.3E-34 195.3 18.8 183 21-218 46-229 (235)
125 PRK08703 short chain dehydroge 100.0 2.8E-29 6E-34 194.3 20.3 198 1-217 36-239 (239)
126 PRK05876 short chain dehydroge 100.0 3.4E-29 7.4E-34 197.7 20.9 196 2-205 37-239 (275)
127 PRK05855 short chain dehydroge 100.0 6.1E-29 1.3E-33 214.8 22.6 198 1-206 345-548 (582)
128 PRK09730 putative NAD(P)-bindi 100.0 1.9E-28 4E-33 190.3 23.1 210 2-218 33-244 (247)
129 PRK08217 fabG 3-ketoacyl-(acyl 100.0 2.4E-28 5.3E-33 190.3 22.9 204 2-218 36-248 (253)
130 TIGR02632 RhaD_aldol-ADH rhamn 100.0 1.7E-28 3.6E-33 214.2 24.1 209 2-218 445-667 (676)
131 PRK12827 short chain dehydroge 100.0 2.8E-28 6E-33 189.5 22.9 203 3-218 42-245 (249)
132 PRK07832 short chain dehydroge 100.0 1.7E-28 3.6E-33 193.6 21.7 205 1-215 30-240 (272)
133 PRK12428 3-alpha-hydroxysteroi 100.0 1.8E-29 3.9E-34 195.7 15.8 172 23-218 26-227 (241)
134 PRK05650 short chain dehydroge 100.0 2.2E-28 4.7E-33 192.6 22.1 196 2-206 31-226 (270)
135 PRK05565 fabG 3-ketoacyl-(acyl 100.0 3.8E-28 8.2E-33 188.5 23.1 206 2-218 37-242 (247)
136 PRK07454 short chain dehydroge 100.0 2.2E-28 4.8E-33 189.5 21.2 194 1-211 36-229 (241)
137 PRK09134 short chain dehydroge 100.0 6.5E-28 1.4E-32 188.7 23.9 200 3-218 42-241 (258)
138 PRK07774 short chain dehydroge 100.0 4.7E-28 1E-32 188.5 22.5 204 2-218 37-243 (250)
139 PRK06182 short chain dehydroge 100.0 2.6E-28 5.6E-33 192.5 21.2 196 2-212 34-246 (273)
140 PRK07074 short chain dehydroge 100.0 5.4E-28 1.2E-32 189.0 22.1 205 2-218 33-238 (257)
141 PRK12745 3-ketoacyl-(acyl-carr 100.0 7.1E-28 1.5E-32 188.2 22.0 209 5-218 37-248 (256)
142 PRK07060 short chain dehydroge 100.0 6.3E-28 1.4E-32 187.2 21.2 200 2-218 40-239 (245)
143 PRK08261 fabG 3-ketoacyl-(acyl 100.0 3.6E-28 7.7E-33 204.3 21.3 186 22-218 258-443 (450)
144 PRK08263 short chain dehydroge 100.0 7.8E-28 1.7E-32 190.0 21.5 193 2-206 34-234 (275)
145 PRK12826 3-ketoacyl-(acyl-carr 100.0 2.1E-27 4.5E-32 184.8 22.7 208 1-218 36-244 (251)
146 PRK07041 short chain dehydroge 100.0 1.1E-27 2.4E-32 184.3 19.6 195 2-218 28-224 (230)
147 PRK05557 fabG 3-ketoacyl-(acyl 100.0 5.1E-27 1.1E-31 182.2 23.4 202 6-218 41-242 (248)
148 PRK10538 malonic semialdehyde 100.0 3.1E-27 6.6E-32 183.9 22.0 198 2-214 31-231 (248)
149 PRK07577 short chain dehydroge 100.0 3.3E-27 7.1E-32 182.1 21.8 185 23-218 44-229 (234)
150 PRK07825 short chain dehydroge 100.0 2.2E-27 4.7E-32 187.2 20.9 182 2-207 36-217 (273)
151 PRK06180 short chain dehydroge 100.0 3.9E-27 8.6E-32 186.2 22.2 193 2-206 35-238 (277)
152 PRK12825 fabG 3-ketoacyl-(acyl 100.0 1.5E-26 3.3E-31 179.5 23.7 205 3-218 39-243 (249)
153 PRK08945 putative oxoacyl-(acy 100.0 6.4E-27 1.4E-31 182.0 21.4 197 1-216 42-242 (247)
154 PRK08324 short chain dehydroge 100.0 7.4E-27 1.6E-31 204.7 23.8 209 1-218 452-672 (681)
155 PRK07024 short chain dehydroge 100.0 5.5E-27 1.2E-31 183.4 20.4 185 1-207 32-217 (257)
156 PRK06924 short chain dehydroge 100.0 3.3E-27 7.3E-32 183.9 18.7 192 19-218 47-248 (251)
157 PRK05653 fabG 3-ketoacyl-(acyl 100.0 2E-26 4.3E-31 178.6 22.7 207 1-218 35-241 (246)
158 PRK06196 oxidoreductase; Provi 100.0 8E-27 1.7E-31 187.6 21.1 192 1-207 56-262 (315)
159 PRK09009 C factor cell-cell si 100.0 2.8E-27 6E-32 182.7 17.7 176 20-218 43-229 (235)
160 TIGR01830 3oxo_ACP_reduc 3-oxo 100.0 2.1E-26 4.6E-31 177.9 22.4 202 6-218 34-235 (239)
161 PRK05866 short chain dehydroge 100.0 8.1E-27 1.8E-31 185.7 20.6 185 1-205 70-257 (293)
162 TIGR01289 LPOR light-dependent 100.0 1.4E-26 2.9E-31 186.1 21.6 205 1-212 34-274 (314)
163 PLN02780 ketoreductase/ oxidor 100.0 9.1E-27 2E-31 187.3 19.8 181 1-205 83-271 (320)
164 PRK06077 fabG 3-ketoacyl-(acyl 100.0 2.7E-26 5.9E-31 178.8 21.6 200 4-217 40-241 (252)
165 PRK05993 short chain dehydroge 100.0 1.2E-26 2.7E-31 183.4 19.8 190 2-206 35-242 (277)
166 KOG1611 Predicted short chain- 100.0 2.8E-26 6.1E-31 168.7 19.5 167 2-169 36-211 (249)
167 TIGR01963 PHB_DH 3-hydroxybuty 100.0 6.4E-26 1.4E-30 176.9 22.7 209 1-218 31-249 (255)
168 PRK08267 short chain dehydroge 100.0 3.5E-26 7.6E-31 179.1 21.0 189 2-205 32-221 (260)
169 PRK07666 fabG 3-ketoacyl-(acyl 100.0 3.9E-26 8.5E-31 176.7 20.9 188 1-206 37-224 (239)
170 PRK07775 short chain dehydroge 100.0 7.2E-26 1.6E-30 178.7 22.5 195 2-205 41-239 (274)
171 PRK12829 short chain dehydroge 100.0 7.6E-26 1.6E-30 177.4 22.5 206 2-218 42-258 (264)
172 PRK06194 hypothetical protein; 100.0 6.3E-26 1.4E-30 180.1 22.2 204 2-207 37-254 (287)
173 PRK09072 short chain dehydroge 99.9 5.2E-26 1.1E-30 178.5 20.8 188 1-206 35-222 (263)
174 PRK06914 short chain dehydroge 99.9 7.2E-26 1.6E-30 179.2 21.5 196 2-207 34-244 (280)
175 PRK06181 short chain dehydroge 99.9 7.6E-26 1.6E-30 177.4 21.1 194 2-206 32-226 (263)
176 PRK07904 short chain dehydroge 99.9 2.8E-26 6E-31 179.0 18.4 182 2-206 40-223 (253)
177 PRK06179 short chain dehydroge 99.9 3.2E-26 6.9E-31 180.3 18.9 177 21-206 46-231 (270)
178 KOG1610 Corticosteroid 11-beta 99.9 1.8E-26 3.9E-31 177.9 15.1 151 6-168 64-217 (322)
179 PRK07578 short chain dehydroge 99.9 1.6E-25 3.4E-30 168.8 20.0 163 24-216 35-197 (199)
180 COG3967 DltE Short-chain dehyd 99.9 2.2E-26 4.8E-31 166.7 14.4 152 1-165 35-188 (245)
181 PRK12828 short chain dehydroge 99.9 2.2E-25 4.8E-30 172.1 20.4 196 2-218 38-233 (239)
182 PRK08251 short chain dehydroge 99.9 5.4E-25 1.2E-29 171.1 21.6 183 2-206 33-218 (248)
183 PRK05854 short chain dehydroge 99.9 3.3E-25 7.1E-30 178.0 20.8 195 1-205 44-259 (313)
184 PRK07806 short chain dehydroge 99.9 6.3E-26 1.4E-30 176.4 16.1 195 2-218 37-240 (248)
185 PRK09135 pteridine reductase; 99.9 1.6E-24 3.4E-29 168.4 23.3 204 2-218 37-242 (249)
186 KOG4169 15-hydroxyprostaglandi 99.9 1.5E-26 3.3E-31 170.2 10.4 185 10-214 43-237 (261)
187 PRK07023 short chain dehydroge 99.9 5.7E-25 1.2E-29 170.6 18.5 186 19-214 44-239 (243)
188 PRK07201 short chain dehydroge 99.9 5.9E-25 1.3E-29 192.8 20.6 185 1-205 401-587 (657)
189 PRK06482 short chain dehydroge 99.9 3E-24 6.5E-29 169.6 22.6 192 2-205 33-234 (276)
190 PRK05693 short chain dehydroge 99.9 2.1E-24 4.5E-29 170.4 21.6 188 2-205 32-232 (274)
191 PRK07102 short chain dehydroge 99.9 1.6E-24 3.5E-29 168.1 20.4 184 2-209 32-216 (243)
192 KOG1204 Predicted dehydrogenas 99.9 2.3E-25 4.9E-30 164.0 14.6 184 23-216 57-247 (253)
193 COG1028 FabG Dehydrogenases wi 99.9 3.8E-24 8.3E-29 166.7 21.0 196 8-216 44-245 (251)
194 PRK07326 short chain dehydroge 99.9 4.8E-24 1E-28 164.7 21.3 188 1-210 36-223 (237)
195 PRK07453 protochlorophyllide o 99.9 4.2E-24 9.1E-29 172.4 21.6 206 1-213 36-279 (322)
196 PRK06197 short chain dehydroge 99.9 2E-24 4.3E-29 173.1 19.6 200 1-215 46-262 (306)
197 KOG1199 Short-chain alcohol de 99.9 2.6E-26 5.7E-31 162.2 7.6 202 7-218 45-253 (260)
198 KOG1208 Dehydrogenases with di 99.9 1.4E-24 3E-29 172.3 17.8 197 1-212 65-277 (314)
199 KOG1209 1-Acyl dihydroxyaceton 99.9 5.5E-25 1.2E-29 160.4 11.4 140 21-170 53-193 (289)
200 PRK05786 fabG 3-ketoacyl-(acyl 99.9 3.5E-23 7.5E-28 160.0 20.7 195 2-218 36-232 (238)
201 PF00106 adh_short: short chai 99.9 4.9E-24 1.1E-28 156.1 14.6 133 2-146 32-166 (167)
202 KOG1210 Predicted 3-ketosphing 99.9 8.4E-24 1.8E-28 162.9 16.2 192 1-203 63-257 (331)
203 PRK06101 short chain dehydroge 99.9 2.6E-23 5.6E-28 161.1 18.1 175 2-206 32-206 (240)
204 KOG1014 17 beta-hydroxysteroid 99.9 1E-23 2.2E-28 162.7 12.3 157 1-169 79-240 (312)
205 PRK09291 short chain dehydroge 99.9 4.7E-22 1E-26 155.3 20.5 187 2-204 33-227 (257)
206 PRK08017 oxidoreductase; Provi 99.9 3.2E-22 6.9E-27 156.2 19.4 192 2-208 33-225 (256)
207 PRK08264 short chain dehydroge 99.9 3.4E-21 7.4E-26 148.9 19.9 160 19-206 48-208 (238)
208 PRK08177 short chain dehydroge 99.9 5.8E-21 1.3E-25 146.5 17.3 135 21-167 46-185 (225)
209 PRK08219 short chain dehydroge 99.9 2E-20 4.3E-25 143.4 20.2 180 2-206 33-212 (227)
210 PRK06953 short chain dehydroge 99.9 1.3E-20 2.7E-25 144.3 18.1 178 2-216 32-214 (222)
211 TIGR02813 omega_3_PfaA polyket 99.8 9.6E-19 2.1E-23 168.0 19.5 144 8-167 2082-2225(2582)
212 PRK12367 short chain dehydroge 99.8 1.8E-18 4E-23 134.2 17.5 149 23-206 61-212 (245)
213 smart00822 PKS_KR This enzymat 99.7 3.2E-17 7E-22 120.5 12.8 134 13-163 46-179 (180)
214 PRK07424 bifunctional sterol d 99.7 3E-16 6.5E-21 129.1 19.0 167 2-209 209-375 (406)
215 KOG1478 3-keto sterol reductas 99.7 6.5E-17 1.4E-21 121.3 10.1 164 1-173 38-241 (341)
216 PF08659 KR: KR domain; Inter 99.7 1.7E-16 3.7E-21 117.7 9.6 139 7-162 40-178 (181)
217 PLN03209 translocon at the inn 99.7 1.7E-15 3.6E-20 128.0 16.3 184 2-215 111-305 (576)
218 PRK13656 trans-2-enoyl-CoA red 99.6 5E-14 1.1E-18 113.7 18.4 151 10-171 93-282 (398)
219 TIGR03589 PseB UDP-N-acetylglu 99.6 1.4E-13 3.1E-18 111.2 17.5 172 2-205 37-217 (324)
220 PLN02989 cinnamyl-alcohol dehy 99.5 1.9E-12 4.2E-17 104.6 15.6 160 20-205 56-243 (325)
221 TIGR02622 CDP_4_6_dhtase CDP-g 99.4 9.7E-12 2.1E-16 101.5 15.8 164 20-204 52-240 (349)
222 PRK06720 hypothetical protein; 99.4 1.4E-11 3.1E-16 90.1 11.8 114 2-119 47-161 (169)
223 PRK10217 dTDP-glucose 4,6-dehy 99.3 1.2E-10 2.6E-15 95.3 16.5 170 20-205 51-242 (355)
224 PLN02896 cinnamyl-alcohol dehy 99.3 6.1E-10 1.3E-14 91.1 16.9 181 2-205 41-264 (353)
225 PLN02986 cinnamyl-alcohol dehy 99.3 4.5E-10 9.7E-15 90.7 15.8 159 20-205 56-242 (322)
226 TIGR01181 dTDP_gluc_dehyt dTDP 99.2 3.1E-10 6.6E-15 91.1 14.4 161 21-205 51-232 (317)
227 PLN02650 dihydroflavonol-4-red 99.2 3.3E-10 7.1E-15 92.6 14.7 158 21-205 57-244 (351)
228 PRK10084 dTDP-glucose 4,6 dehy 99.2 9E-10 1.9E-14 90.0 15.0 170 20-205 50-249 (352)
229 PLN02214 cinnamoyl-CoA reducta 99.2 2.8E-09 6.1E-14 86.9 17.0 154 20-205 60-241 (342)
230 PLN02583 cinnamoyl-CoA reducta 99.2 1.8E-09 3.9E-14 86.3 15.0 156 19-205 56-235 (297)
231 PLN02653 GDP-mannose 4,6-dehyd 99.1 2.5E-09 5.3E-14 87.1 15.0 164 19-205 59-248 (340)
232 PLN02572 UDP-sulfoquinovose sy 99.1 1.6E-09 3.4E-14 91.1 14.0 127 20-167 113-263 (442)
233 PLN00198 anthocyanidin reducta 99.1 5.7E-09 1.2E-13 84.9 16.1 158 21-205 60-256 (338)
234 PLN02662 cinnamyl-alcohol dehy 99.0 8.3E-09 1.8E-13 83.2 13.8 159 20-205 55-241 (322)
235 PLN00141 Tic62-NAD(P)-related 99.0 1.6E-08 3.4E-13 78.9 14.7 153 20-205 62-220 (251)
236 COG1088 RfbB dTDP-D-glucose 4, 99.0 1.4E-08 3E-13 78.7 13.9 162 20-205 51-234 (340)
237 PF08643 DUF1776: Fungal famil 99.0 1.1E-08 2.4E-13 80.5 13.7 139 20-165 50-204 (299)
238 TIGR01472 gmd GDP-mannose 4,6- 99.0 2.9E-08 6.4E-13 80.9 15.2 109 20-146 55-174 (343)
239 KOG4022 Dihydropteridine reduc 99.0 3.9E-08 8.4E-13 69.7 13.5 167 27-213 49-219 (236)
240 PF02719 Polysacc_synt_2: Poly 99.0 3.5E-09 7.5E-14 83.0 8.9 174 2-203 30-217 (293)
241 TIGR03466 HpnA hopanoid-associ 98.9 8.8E-08 1.9E-12 77.3 15.2 156 21-205 44-220 (328)
242 PLN02240 UDP-glucose 4-epimera 98.9 7E-08 1.5E-12 78.8 14.5 122 19-164 57-189 (352)
243 TIGR01746 Thioester-redct thio 98.9 2.2E-07 4.7E-12 76.0 17.0 157 20-207 61-250 (367)
244 TIGR01179 galE UDP-glucose-4-e 98.9 5E-08 1.1E-12 78.6 12.3 122 21-166 48-180 (328)
245 COG1086 Predicted nucleoside-d 98.9 2.4E-07 5.2E-12 77.9 16.1 174 2-203 282-465 (588)
246 KOG1502 Flavonol reductase/cin 98.8 1.5E-07 3.2E-12 74.8 14.0 177 2-205 37-244 (327)
247 PRK15181 Vi polysaccharide bio 98.8 1.9E-07 4E-12 76.4 14.8 157 21-204 70-250 (348)
248 PLN02686 cinnamoyl-CoA reducta 98.8 3.7E-07 8.1E-12 75.2 16.5 157 21-204 108-292 (367)
249 PF01370 Epimerase: NAD depend 98.8 1.2E-07 2.7E-12 72.8 12.3 162 21-207 43-227 (236)
250 PF01073 3Beta_HSD: 3-beta hyd 98.8 9E-08 1.9E-12 75.8 11.5 153 24-202 49-228 (280)
251 PRK10675 UDP-galactose-4-epime 98.8 1.5E-07 3.3E-12 76.4 13.1 122 20-165 50-183 (338)
252 PLN02725 GDP-4-keto-6-deoxyman 98.7 1.3E-06 2.8E-11 69.9 16.2 172 10-205 12-221 (306)
253 PRK11150 rfaD ADP-L-glycero-D- 98.7 1.5E-06 3.3E-11 69.7 16.5 156 27-205 45-227 (308)
254 TIGR01214 rmlD dTDP-4-dehydror 98.7 2.1E-06 4.6E-11 68.1 16.9 167 8-205 12-199 (287)
255 TIGR02197 heptose_epim ADP-L-g 98.7 6.6E-07 1.4E-11 71.8 14.1 157 25-205 46-232 (314)
256 COG1091 RfbD dTDP-4-dehydrorha 98.7 2.7E-06 5.8E-11 66.6 16.2 170 5-207 10-200 (281)
257 PLN02427 UDP-apiose/xylose syn 98.7 2.6E-07 5.7E-12 76.5 10.9 157 21-205 66-275 (386)
258 PRK08261 fabG 3-ketoacyl-(acyl 98.6 3.2E-07 6.8E-12 77.6 10.7 96 80-218 99-194 (450)
259 PLN02260 probable rhamnose bio 98.6 1.2E-06 2.7E-11 77.6 14.3 162 20-205 57-241 (668)
260 PRK11908 NAD-dependent epimera 98.5 7E-06 1.5E-10 67.0 15.5 157 21-205 47-239 (347)
261 PLN02695 GDP-D-mannose-3',5'-e 98.5 8E-06 1.7E-10 67.4 15.4 158 22-205 66-254 (370)
262 COG0451 WcaG Nucleoside-diphos 98.5 9.7E-06 2.1E-10 64.9 15.2 159 22-206 44-229 (314)
263 PF07993 NAD_binding_4: Male s 98.4 2.6E-06 5.6E-11 66.4 10.4 120 19-164 59-200 (249)
264 PLN02657 3,8-divinyl protochlo 98.4 4.6E-06 9.9E-11 69.3 12.2 146 20-205 111-266 (390)
265 PF04321 RmlD_sub_bind: RmlD s 98.4 4.2E-06 9.1E-11 66.6 11.2 168 6-205 11-199 (286)
266 PRK08125 bifunctional UDP-gluc 98.4 1.1E-05 2.4E-10 71.5 14.8 157 21-205 361-553 (660)
267 PF13460 NAD_binding_10: NADH( 98.4 5.3E-06 1.1E-10 61.3 10.6 136 19-204 38-182 (183)
268 KOG0747 Putative NAD+-dependen 98.4 3.6E-06 7.7E-11 65.1 9.2 162 20-205 57-239 (331)
269 COG1087 GalE UDP-glucose 4-epi 98.3 5.8E-06 1.3E-10 64.6 10.1 112 22-158 46-168 (329)
270 PRK09987 dTDP-4-dehydrorhamnos 98.3 2.7E-05 5.9E-10 62.3 13.1 126 9-165 14-157 (299)
271 COG3320 Putative dehydrogenase 98.3 2.7E-05 5.9E-10 62.9 12.7 118 19-167 59-202 (382)
272 PLN02778 3,5-epimerase/4-reduc 98.2 0.00011 2.4E-09 58.8 14.8 166 9-205 23-210 (298)
273 PRK07201 short chain dehydroge 98.2 4.2E-05 9.2E-10 67.7 13.2 116 20-165 51-181 (657)
274 TIGR02114 coaB_strep phosphopa 98.1 1E-05 2.2E-10 62.2 7.5 78 8-88 28-117 (227)
275 PLN02206 UDP-glucuronate decar 98.1 0.00012 2.5E-09 61.9 13.1 137 48-205 183-346 (442)
276 PLN02996 fatty acyl-CoA reduct 98.0 6.2E-05 1.3E-09 64.4 10.5 116 20-166 84-268 (491)
277 KOG1371 UDP-glucose 4-epimeras 98.0 4E-05 8.7E-10 60.6 8.4 119 6-146 41-171 (343)
278 PLN02260 probable rhamnose bio 98.0 0.00023 4.9E-09 63.4 14.3 129 8-159 393-539 (668)
279 CHL00194 ycf39 Ycf39; Provisio 98.0 0.00021 4.5E-09 57.7 12.7 146 21-205 44-192 (317)
280 PLN02166 dTDP-glucose 4,6-dehy 98.0 0.00042 9.2E-09 58.5 14.7 136 48-204 184-346 (436)
281 PRK05865 hypothetical protein; 98.0 9.6E-05 2.1E-09 66.6 11.2 124 21-204 41-172 (854)
282 TIGR03443 alpha_am_amid L-amin 98.0 0.00073 1.6E-08 65.0 17.8 158 21-205 1035-1232(1389)
283 TIGR01777 yfcH conserved hypot 97.4 0.0056 1.2E-07 48.4 12.7 142 44-205 53-213 (292)
284 COG1089 Gmd GDP-D-mannose dehy 97.4 0.00041 8.9E-09 54.1 5.7 123 20-161 55-190 (345)
285 KOG1202 Animal-type fatty acid 97.3 0.00045 9.8E-09 63.2 5.6 125 10-145 1811-1935(2376)
286 PLN02503 fatty acyl-CoA reduct 97.3 0.0086 1.9E-07 52.5 13.2 73 20-117 192-270 (605)
287 KOG1431 GDP-L-fucose synthetas 97.2 0.0052 1.1E-07 46.6 9.5 156 26-207 38-229 (315)
288 COG1090 Predicted nucleoside-d 96.8 0.034 7.3E-07 43.5 11.3 183 9-206 12-212 (297)
289 KOG1430 C-3 sterol dehydrogena 96.8 0.0069 1.5E-07 49.5 7.8 119 20-166 55-187 (361)
290 PRK08309 short chain dehydroge 96.7 0.0066 1.4E-07 44.8 6.7 143 2-213 30-173 (177)
291 TIGR03649 ergot_EASG ergot alk 96.4 0.079 1.7E-06 41.9 11.3 139 22-206 41-185 (285)
292 KOG2733 Uncharacterized membra 96.3 0.071 1.5E-06 43.2 10.4 51 1-58 39-93 (423)
293 COG4982 3-oxoacyl-[acyl-carrie 96.3 0.18 4E-06 43.9 13.3 178 19-207 450-641 (866)
294 PLN00016 RNA-binding protein; 96.3 0.1 2.3E-06 43.2 11.7 89 107-205 157-262 (378)
295 PRK12320 hypothetical protein; 95.8 0.33 7.1E-06 43.5 13.3 133 21-205 41-176 (699)
296 PRK06732 phosphopantothenate-- 95.8 0.038 8.3E-07 42.5 6.7 75 8-82 29-115 (229)
297 TIGR02813 omega_3_PfaA polyket 95.7 0.19 4.1E-06 51.3 12.2 142 9-160 1769-1938(2582)
298 PF12241 Enoyl_reductase: Tran 95.0 1.1 2.5E-05 34.0 14.0 144 13-166 16-197 (237)
299 KOG1221 Acyl-CoA reductase [Li 94.3 0.46 1E-05 40.3 9.1 79 20-117 79-157 (467)
300 PF03435 Saccharop_dh: Sacchar 93.5 0.14 3.1E-06 42.5 5.0 49 1-58 29-77 (386)
301 KOG1429 dTDP-glucose 4-6-dehyd 92.5 0.62 1.3E-05 36.9 6.6 137 48-205 91-254 (350)
302 PF05368 NmrA: NmrA-like famil 91.3 5.2 0.00011 30.4 11.1 151 11-209 36-199 (233)
303 KOG2865 NADH:ubiquinone oxidor 91.1 4.3 9.3E-05 32.4 9.9 151 20-208 109-267 (391)
304 PRK12548 shikimate 5-dehydroge 90.2 0.99 2.2E-05 36.0 6.1 52 2-60 157-211 (289)
305 PRK05579 bifunctional phosphop 89.9 1.4 3.1E-05 36.8 7.0 53 8-63 217-282 (399)
306 PLN00106 malate dehydrogenase 88.2 3.5 7.5E-05 33.6 7.8 85 45-147 83-180 (323)
307 KOG1203 Predicted dehydrogenas 87.0 6.6 0.00014 33.0 8.9 73 78-165 176-249 (411)
308 COG1058 CinA Predicted nucleot 85.8 9.3 0.0002 29.9 8.7 84 8-96 23-106 (255)
309 TIGR00521 coaBC_dfp phosphopan 85.3 2.6 5.7E-05 35.2 5.9 81 8-91 214-310 (390)
310 COG1748 LYS9 Saccharopine dehy 84.7 2 4.4E-05 35.7 4.9 49 1-59 31-79 (389)
311 KOG3191 Predicted N6-DNA-methy 84.4 13 0.00029 27.6 8.3 64 2-77 75-138 (209)
312 PRK14901 16S rRNA methyltransf 83.4 7.8 0.00017 32.9 8.0 99 2-116 284-386 (434)
313 KOG1372 GDP-mannose 4,6 dehydr 82.7 0.69 1.5E-05 35.9 1.3 166 19-205 82-270 (376)
314 PRK14968 putative methyltransf 81.0 9.3 0.0002 27.8 6.9 48 2-60 52-102 (188)
315 PRK15128 23S rRNA m(5)C1962 me 80.1 30 0.00065 29.1 10.2 53 2-60 250-305 (396)
316 TIGR00446 nop2p NOL1/NOP2/sun 77.9 32 0.00069 27.0 10.2 92 2-117 103-202 (264)
317 PF13649 Methyltransf_25: Meth 77.2 9.4 0.0002 24.7 5.3 60 2-76 31-90 (101)
318 cd01078 NAD_bind_H4MPT_DH NADP 75.0 14 0.00031 27.3 6.4 52 1-60 58-109 (194)
319 COG3268 Uncharacterized conser 74.6 6.4 0.00014 32.1 4.5 46 1-58 36-81 (382)
320 COG3727 Vsr DNA G:T-mismatch r 73.9 8.8 0.00019 26.7 4.4 44 1-44 90-134 (150)
321 PF06962 rRNA_methylase: Putat 73.9 2.1 4.6E-05 30.2 1.6 104 5-143 9-114 (140)
322 PF04127 DFP: DNA / pantothena 72.1 9.3 0.0002 28.4 4.7 55 8-62 32-96 (185)
323 PRK10901 16S rRNA methyltransf 70.6 46 0.00099 28.2 9.1 51 2-60 275-325 (427)
324 cd00466 DHQase_II Dehydroquina 69.9 25 0.00054 24.8 6.0 36 18-58 40-75 (140)
325 PRK14903 16S rRNA methyltransf 68.5 74 0.0016 27.1 10.2 96 2-117 269-369 (431)
326 PRK05395 3-dehydroquinate dehy 67.0 27 0.00058 24.8 5.8 36 18-58 42-77 (146)
327 TIGR01884 cas_HTH CRISPR locus 66.8 28 0.00061 26.1 6.4 52 8-59 44-98 (203)
328 PRK13015 3-dehydroquinate dehy 66.2 31 0.00067 24.5 6.0 36 18-58 42-77 (146)
329 COG4123 Predicted O-methyltran 65.8 26 0.00057 27.3 6.1 90 6-116 79-172 (248)
330 cd00885 cinA Competence-damage 65.8 50 0.0011 24.1 10.1 84 8-96 21-104 (170)
331 PRK14902 16S rRNA methyltransf 65.5 65 0.0014 27.5 9.0 49 2-59 282-331 (444)
332 KOG4039 Serine/threonine kinas 65.4 37 0.0008 25.3 6.4 107 24-169 66-176 (238)
333 PF01220 DHquinase_II: Dehydro 65.0 23 0.00049 25.0 5.1 38 17-59 40-77 (140)
334 PRK11188 rrmJ 23S rRNA methylt 65.0 58 0.0013 24.6 7.8 35 21-57 92-126 (209)
335 TIGR01088 aroQ 3-dehydroquinat 64.9 32 0.00069 24.3 5.8 36 18-58 40-75 (141)
336 PRK14904 16S rRNA methyltransf 64.6 50 0.0011 28.2 8.2 91 2-117 282-380 (445)
337 COG0299 PurN Folate-dependent 64.2 9.5 0.0002 28.5 3.2 137 3-165 9-147 (200)
338 PTZ00325 malate dehydrogenase; 64.2 78 0.0017 25.8 9.8 82 45-146 73-169 (321)
339 PF03808 Glyco_tran_WecB: Glyc 63.2 49 0.0011 24.1 6.9 17 126-142 147-163 (172)
340 PRK01215 competence damage-ind 63.1 74 0.0016 25.1 8.5 83 8-95 25-107 (264)
341 KOG0092 GTPase Rab5/YPT51 and 62.1 24 0.00052 26.4 5.0 41 19-59 77-119 (200)
342 TIGR00563 rsmB ribosomal RNA s 61.2 77 0.0017 26.9 8.7 94 2-117 269-371 (426)
343 PRK14967 putative methyltransf 60.7 71 0.0015 24.2 8.0 47 3-60 67-113 (223)
344 TIGR03704 PrmC_rel_meth putati 60.7 56 0.0012 25.5 7.2 58 3-70 118-175 (251)
345 KOG2774 NAD dependent epimeras 59.9 2.7 6E-05 32.4 -0.2 113 25-164 92-217 (366)
346 TIGR00177 molyb_syn molybdenum 56.0 68 0.0015 22.5 6.9 62 10-76 31-92 (144)
347 COG0144 Sun tRNA and rRNA cyto 55.0 81 0.0018 26.1 7.6 96 2-118 189-292 (355)
348 PF01729 QRPTase_C: Quinolinat 54.4 52 0.0011 24.0 5.7 38 21-60 100-137 (169)
349 PF00875 DNA_photolyase: DNA p 53.8 59 0.0013 23.2 6.0 46 6-58 53-98 (165)
350 PRK03670 competence damage-ind 52.4 1.1E+02 0.0024 23.9 9.8 81 8-92 22-102 (252)
351 PF13659 Methyltransf_26: Meth 51.9 19 0.00041 23.8 3.0 49 4-60 32-82 (117)
352 cd01338 MDH_choloroplast_like 51.7 1.3E+02 0.0029 24.5 9.4 94 44-154 74-178 (322)
353 COG3007 Uncharacterized paraqu 50.6 1.4E+02 0.0029 24.3 13.2 130 17-155 100-266 (398)
354 cd01842 SGNH_hydrolase_like_5 50.5 1E+02 0.0022 22.9 7.8 54 47-117 49-102 (183)
355 PRK11933 yebU rRNA (cytosine-C 50.0 1.7E+02 0.0037 25.3 9.6 93 2-117 145-245 (470)
356 COG1832 Predicted CoA-binding 49.7 61 0.0013 22.8 5.1 36 3-38 81-116 (140)
357 PRK11430 putative CoA-transfer 49.6 73 0.0016 26.6 6.6 31 23-57 72-102 (381)
358 PF08732 HIM1: HIM1; InterPro 49.6 87 0.0019 26.3 6.8 101 49-168 204-305 (410)
359 cd06533 Glyco_transf_WecG_TagA 49.6 95 0.0021 22.6 6.5 28 30-57 54-81 (171)
360 COG2263 Predicted RNA methylas 48.0 88 0.0019 23.5 6.0 46 3-61 76-121 (198)
361 TIGR00696 wecB_tagA_cpsF bacte 47.5 1.1E+02 0.0024 22.5 6.8 25 30-54 56-80 (177)
362 PF05582 Peptidase_U57: YabG p 47.2 1.2E+02 0.0027 24.2 7.0 50 3-57 113-163 (287)
363 PF11965 DUF3479: Domain of un 47.0 88 0.0019 22.8 5.8 118 21-147 2-128 (164)
364 PRK09489 rsmC 16S ribosomal RN 46.8 86 0.0019 25.8 6.5 76 4-115 229-304 (342)
365 TIGR02667 moaB_proteo molybden 46.5 1.1E+02 0.0024 22.1 9.4 71 10-83 26-96 (163)
366 PF05116 S6PP: Sucrose-6F-phos 46.4 75 0.0016 24.7 5.9 74 6-82 19-94 (247)
367 TIGR03253 oxalate_frc formyl-C 46.1 1.3E+02 0.0029 25.4 7.7 32 23-58 67-98 (415)
368 PF13684 Dak1_2: Dihydroxyacet 45.7 1.2E+02 0.0025 24.7 7.0 52 8-59 252-304 (313)
369 TIGR01346 isocit_lyase isocitr 45.6 2.1E+02 0.0046 25.1 10.1 44 19-62 379-422 (527)
370 cd07388 MPP_Tt1561 Thermus the 45.4 91 0.002 23.9 6.1 30 4-33 16-45 (224)
371 PF01189 Nol1_Nop2_Fmu: NOL1/N 45.4 1.4E+02 0.0031 23.7 7.4 100 2-118 117-223 (283)
372 PF01488 Shikimate_DH: Shikima 45.2 54 0.0012 22.7 4.5 45 2-60 43-87 (135)
373 PF05036 SPOR: Sporulation rel 44.6 63 0.0014 19.2 4.3 41 3-43 13-65 (76)
374 TIGR00537 hemK_rel_arch HemK-r 44.5 1.2E+02 0.0026 21.9 8.4 44 4-59 50-93 (179)
375 PRK09328 N5-glutamine S-adenos 44.4 1.1E+02 0.0024 23.8 6.7 45 5-60 142-187 (275)
376 COG0275 Predicted S-adenosylme 43.8 53 0.0012 26.5 4.6 55 1-60 54-108 (314)
377 COG1609 PurR Transcriptional r 43.8 1.8E+02 0.0038 23.7 9.1 95 8-117 77-185 (333)
378 PRK15116 sulfur acceptor prote 43.0 1.5E+02 0.0032 23.5 7.0 43 110-153 149-192 (268)
379 cd00758 MoCF_BD MoCF_BD: molyb 42.9 1.1E+02 0.0024 21.1 7.6 64 9-77 22-85 (133)
380 PRK05398 formyl-coenzyme A tra 42.6 1.5E+02 0.0033 25.1 7.5 31 23-57 68-98 (416)
381 cd00755 YgdL_like Family of ac 42.5 1.3E+02 0.0028 23.3 6.5 30 128-158 148-179 (231)
382 PLN02819 lysine-ketoglutarate 41.8 56 0.0012 31.3 5.2 46 2-58 613-658 (1042)
383 COG0788 PurU Formyltetrahydrof 41.4 1.6E+02 0.0036 23.4 6.8 29 78-114 167-195 (287)
384 PRK03525 crotonobetainyl-CoA:c 41.4 1.4E+02 0.003 25.2 7.1 31 23-57 67-97 (405)
385 TIGR00006 S-adenosyl-methyltra 41.0 53 0.0011 26.6 4.3 54 1-59 50-103 (305)
386 PF00994 MoCF_biosynth: Probab 39.9 1.3E+02 0.0028 21.0 7.3 76 8-90 19-96 (144)
387 KOG0256 1-aminocyclopropane-1- 39.7 1.1E+02 0.0025 25.9 6.0 48 4-53 209-264 (471)
388 PRK09620 hypothetical protein; 39.2 84 0.0018 24.2 5.1 54 9-62 33-101 (229)
389 COG2910 Putative NADH-flavin r 39.0 1.7E+02 0.0036 22.1 12.5 142 22-203 43-197 (211)
390 PF02601 Exonuc_VII_L: Exonucl 38.6 2.1E+02 0.0045 23.1 7.6 70 2-71 22-98 (319)
391 PRK05458 guanosine 5'-monophos 38.5 1.5E+02 0.0032 24.3 6.6 31 23-53 113-145 (326)
392 COG1570 XseA Exonuclease VII, 38.2 1.4E+02 0.003 25.6 6.4 72 1-72 142-217 (440)
393 cd00578 L-fuc_L-ara-isomerases 38.1 1.1E+02 0.0025 26.1 6.2 49 8-59 25-74 (452)
394 PF05175 MTS: Methyltransferas 37.9 56 0.0012 23.6 3.8 44 3-57 63-107 (170)
395 cd00458 SugarP_isomerase Sugar 37.9 52 0.0011 23.9 3.6 37 21-57 87-123 (169)
396 TIGR03599 YloV DAK2 domain fus 37.2 1.8E+02 0.0039 25.7 7.2 52 8-59 469-521 (530)
397 PRK00549 competence damage-ind 36.8 2.6E+02 0.0057 23.7 9.6 76 8-88 22-97 (414)
398 PF02515 CoA_transf_3: CoA-tra 36.4 54 0.0012 24.3 3.6 29 25-57 1-29 (191)
399 PRK05086 malate dehydrogenase; 35.0 2.4E+02 0.0053 22.8 8.1 45 44-98 65-109 (312)
400 PRK13982 bifunctional SbtC-lik 34.2 97 0.0021 26.9 5.1 54 8-62 285-348 (475)
401 TIGR01162 purE phosphoribosyla 34.2 1.8E+02 0.0039 21.0 7.0 53 4-58 10-63 (156)
402 COG0293 FtsJ 23S rRNA methylas 33.8 1.4E+02 0.003 22.7 5.3 35 21-57 86-120 (205)
403 PF11599 AviRa: RRNA methyltra 33.3 2.3E+02 0.005 21.9 7.4 54 8-66 131-186 (246)
404 PRK05096 guanosine 5'-monophos 33.0 2.8E+02 0.0062 22.9 7.4 53 4-57 106-160 (346)
405 COG0521 MoaB Molybdopterin bio 32.9 2E+02 0.0043 21.1 8.6 81 7-91 28-108 (169)
406 cd01065 NAD_bind_Shikimate_DH 32.3 83 0.0018 21.9 3.9 14 47-60 80-93 (155)
407 PF04472 DUF552: Protein of un 32.2 1.1E+02 0.0025 18.6 4.0 45 4-50 8-52 (73)
408 TIGR00640 acid_CoA_mut_C methy 32.2 62 0.0014 22.5 3.1 49 9-58 43-92 (132)
409 smart00852 MoCF_biosynth Proba 32.1 1.7E+02 0.0037 20.1 8.3 63 9-76 21-83 (135)
410 PRK05692 hydroxymethylglutaryl 31.7 2.6E+02 0.0056 22.4 6.9 45 8-54 122-174 (287)
411 cd08253 zeta_crystallin Zeta-c 31.2 2.5E+02 0.0055 21.8 8.7 10 107-116 236-245 (325)
412 cd07409 MPP_CD73_N CD73 ecto-5 31.1 1.8E+02 0.0039 23.0 6.0 45 6-55 169-213 (281)
413 PRK00050 16S rRNA m(4)C1402 me 31.0 1.1E+02 0.0023 24.7 4.6 52 2-60 51-102 (296)
414 PRK14966 unknown domain/N5-glu 30.7 3.4E+02 0.0073 23.2 7.6 49 3-60 283-331 (423)
415 PF02310 B12-binding: B12 bind 30.6 1.6E+02 0.0035 19.4 5.8 25 20-44 52-77 (121)
416 TIGR01758 MDH_euk_cyt malate d 30.5 1.4E+02 0.003 24.4 5.3 79 22-117 45-128 (324)
417 COG0513 SrmB Superfamily II DN 30.3 2.2E+02 0.0047 24.9 6.7 52 2-56 280-331 (513)
418 PRK03673 hypothetical protein; 29.9 3.4E+02 0.0075 22.9 9.6 70 8-82 23-92 (396)
419 cd05212 NAD_bind_m-THF_DH_Cycl 29.4 1.1E+02 0.0024 21.5 4.0 49 1-59 34-82 (140)
420 cd03522 MoeA_like MoeA_like. T 29.1 3.1E+02 0.0067 22.3 6.9 60 10-73 183-242 (312)
421 PRK11783 rlmL 23S rRNA m(2)G24 29.0 4.6E+02 0.0099 24.1 9.9 50 2-60 568-620 (702)
422 cd01540 PBP1_arabinose_binding 28.9 2.2E+02 0.0047 22.0 6.1 44 9-56 19-62 (289)
423 PRK09424 pntA NAD(P) transhydr 28.8 4E+02 0.0088 23.4 8.6 14 47-60 247-260 (509)
424 TIGR00200 cinA_nterm competenc 28.8 3.7E+02 0.0079 22.9 9.4 70 8-82 22-91 (413)
425 cd00704 MDH Malate dehydrogena 28.6 3.1E+02 0.0068 22.3 7.0 58 42-116 70-128 (323)
426 TIGR03439 methyl_EasF probable 28.5 1.8E+02 0.004 23.7 5.6 47 4-51 87-134 (319)
427 TIGR03534 RF_mod_PrmC protein- 28.3 2.7E+02 0.0058 21.2 7.3 46 4-60 120-166 (251)
428 PF08883 DOPA_dioxygen: Dopa 4 27.5 1.2E+02 0.0026 20.2 3.7 31 24-55 47-77 (104)
429 PF10339 Vel1p: Yeast-specific 27.1 1.2E+02 0.0026 22.1 3.7 55 107-163 112-166 (203)
430 KOG3420 Predicted RNA methylas 27.1 2.5E+02 0.0053 20.3 5.3 62 4-77 80-141 (185)
431 PRK03692 putative UDP-N-acetyl 27.1 3E+02 0.0066 21.4 6.9 17 126-142 203-219 (243)
432 cd01336 MDH_cytoplasmic_cytoso 27.0 1.8E+02 0.004 23.7 5.4 58 43-117 73-131 (325)
433 PF00731 AIRC: AIR carboxylase 26.9 1.6E+02 0.0036 21.0 4.5 53 4-58 12-65 (150)
434 PF01205 UPF0029: Uncharacteri 26.3 1.9E+02 0.0042 19.4 4.5 35 20-54 4-38 (110)
435 cd07938 DRE_TIM_HMGL 3-hydroxy 26.2 3.3E+02 0.0072 21.5 6.9 45 8-54 116-168 (274)
436 PF09670 Cas_Cas02710: CRISPR- 26.1 3.5E+02 0.0076 22.6 7.0 54 5-58 24-80 (379)
437 cd01545 PBP1_SalR Ligand-bindi 26.0 2.7E+02 0.006 21.0 6.2 47 9-57 19-65 (270)
438 KOG1099 SAM-dependent methyltr 26.0 2E+02 0.0044 22.5 5.0 42 22-66 91-132 (294)
439 COG0702 Predicted nucleoside-d 25.8 3E+02 0.0065 20.9 13.4 91 20-142 42-132 (275)
440 cd08606 GDPD_YPL110cp_fungi Gl 25.7 1.7E+02 0.0037 23.1 5.0 40 10-55 236-275 (286)
441 cd06304 PBP1_BmpA_like Peripla 25.7 2.8E+02 0.0061 21.1 6.2 44 9-56 21-64 (260)
442 KOG3923 D-aspartate oxidase [A 25.7 1.6E+02 0.0034 24.0 4.5 42 8-60 154-195 (342)
443 PRK02412 aroD 3-dehydroquinate 25.2 3.3E+02 0.0072 21.2 6.9 56 2-57 24-83 (253)
444 cd01574 PBP1_LacI Ligand-bindi 25.1 3E+02 0.0066 20.7 6.2 48 8-57 18-65 (264)
445 PRK06843 inosine 5-monophospha 25.0 3.5E+02 0.0075 23.0 6.7 42 12-55 158-201 (404)
446 cd07406 MPP_CG11883_N Drosophi 24.7 2.9E+02 0.0063 21.5 6.0 42 7-53 159-200 (257)
447 COG1897 MetA Homoserine trans- 24.6 2.3E+02 0.005 22.5 5.1 62 31-92 81-147 (307)
448 TIGR00237 xseA exodeoxyribonuc 24.4 3.5E+02 0.0075 23.2 6.8 70 2-71 137-210 (432)
449 PRK06774 para-aminobenzoate sy 24.2 2.1E+02 0.0046 21.0 5.0 43 10-61 14-56 (191)
450 TIGR03682 arCOG04112 arCOG0411 24.1 2.3E+02 0.0049 23.0 5.4 46 3-57 226-271 (308)
451 PRK00654 glgA glycogen synthas 24.0 1.3E+02 0.0027 25.8 4.2 43 109-161 2-44 (466)
452 PF13433 Peripla_BP_5: Peripla 24.0 3.6E+02 0.0077 22.6 6.5 44 11-57 154-198 (363)
453 COG0505 CarA Carbamoylphosphat 24.0 2.6E+02 0.0057 23.2 5.6 71 10-91 192-268 (368)
454 TIGR00536 hemK_fam HemK family 23.9 2.5E+02 0.0055 22.2 5.6 47 4-61 147-195 (284)
455 PLN02970 serine racemase 23.9 2.4E+02 0.0052 22.9 5.6 23 36-58 163-185 (328)
456 PF00456 Transketolase_N: Tran 23.8 2.6E+02 0.0056 23.0 5.7 48 9-57 196-243 (332)
457 TIGR03533 L3_gln_methyl protei 23.7 3.8E+02 0.0081 21.3 7.1 49 3-62 153-203 (284)
458 PF07005 DUF1537: Protein of u 23.6 1.6E+02 0.0035 22.2 4.3 50 5-57 18-67 (223)
459 COG0009 SUA5 Putative translat 23.4 3.4E+02 0.0074 20.7 7.0 37 7-45 15-58 (211)
460 PLN02892 isocitrate lyase 23.4 5.4E+02 0.012 23.0 11.9 53 19-72 400-452 (570)
461 TIGR01275 ACC_deam_rel pyridox 22.9 4E+02 0.0086 21.3 6.9 50 9-58 124-179 (311)
462 PRK07649 para-aminobenzoate/an 22.5 2.7E+02 0.0058 20.7 5.2 43 10-61 14-56 (195)
463 COG4552 Eis Predicted acetyltr 22.5 1.1E+02 0.0024 25.4 3.2 28 132-160 85-112 (389)
464 COG1453 Predicted oxidoreducta 22.3 4.8E+02 0.01 22.0 7.4 30 28-57 88-120 (391)
465 PF05397 Med15_fungi: Mediator 22.3 58 0.0013 22.1 1.4 53 2-54 2-56 (115)
466 cd08162 MPP_PhoA_N Synechococc 22.2 2.9E+02 0.0062 22.4 5.7 41 8-53 196-237 (313)
467 PRK06382 threonine dehydratase 22.2 2.4E+02 0.0053 23.7 5.5 53 7-59 131-184 (406)
468 cd06354 PBP1_BmpA_PnrA_like Pe 22.2 3.6E+02 0.0077 20.7 6.1 45 8-56 21-65 (265)
469 COG1736 DPH2 Diphthamide synth 22.1 2.7E+02 0.0058 23.1 5.4 47 3-57 251-297 (347)
470 cd01452 VWA_26S_proteasome_sub 22.1 3.4E+02 0.0074 20.2 10.0 21 142-163 128-148 (187)
471 PRK11634 ATP-dependent RNA hel 22.0 3.7E+02 0.008 24.3 6.8 52 3-57 253-304 (629)
472 COG0514 RecQ Superfamily II DN 21.9 3E+02 0.0065 24.7 6.0 53 3-58 238-290 (590)
473 COG0263 ProB Glutamate 5-kinas 21.9 4.6E+02 0.0099 21.9 6.6 53 107-160 44-106 (369)
474 PRK03604 moaC bifunctional mol 21.4 4.6E+02 0.0099 21.4 9.0 75 9-87 178-252 (312)
475 cd03768 SR_ResInv Serine Recom 21.3 2.6E+02 0.0057 18.6 4.9 47 6-55 43-91 (126)
476 COG0418 PyrC Dihydroorotase [N 21.2 2.8E+02 0.0061 22.7 5.1 50 5-54 117-174 (344)
477 cd05291 HicDH_like L-2-hydroxy 21.1 4.4E+02 0.0095 21.1 8.8 54 47-117 67-120 (306)
478 PRK09453 phosphodiesterase; Pr 21.1 2.7E+02 0.0059 20.1 5.0 27 5-31 13-39 (182)
479 PRK08007 para-aminobenzoate sy 21.0 3.1E+02 0.0067 20.2 5.3 43 10-61 14-56 (187)
480 cd06306 PBP1_TorT-like TorT-li 21.0 3.9E+02 0.0084 20.4 10.2 22 124-145 236-257 (268)
481 cd06284 PBP1_LacI_like_6 Ligan 21.0 3.7E+02 0.008 20.2 6.2 46 9-57 19-64 (267)
482 TIGR01305 GMP_reduct_1 guanosi 20.8 4.9E+02 0.011 21.6 6.8 32 21-52 121-154 (343)
483 PF06414 Zeta_toxin: Zeta toxi 20.7 2.4E+02 0.0052 20.8 4.7 39 5-43 105-143 (199)
484 cd02068 radical_SAM_B12_BD B12 20.7 2.8E+02 0.006 18.7 6.5 47 9-57 28-75 (127)
485 COG0041 PurE Phosphoribosylcar 20.6 3.4E+02 0.0074 19.7 7.1 54 4-59 14-68 (162)
486 cd01747 GATase1_Glutamyl_Hydro 20.4 4.4E+02 0.0096 20.9 7.8 40 11-58 25-64 (273)
487 PF15643 Tox-PL-2: Papain fold 20.3 2.7E+02 0.0059 18.4 4.4 34 82-122 20-53 (100)
488 PF07209 DUF1415: Protein of u 20.3 3.7E+02 0.0079 19.9 7.1 84 7-90 47-140 (174)
489 PRK06498 isocitrate lyase; Pro 20.2 2.7E+02 0.0058 24.4 5.1 44 18-61 344-387 (531)
490 cd01562 Thr-dehyd Threonine de 20.2 3.2E+02 0.0069 21.7 5.6 30 13-45 105-134 (304)
491 cd07410 MPP_CpdB_N Escherichia 20.2 2.3E+02 0.0049 22.2 4.7 16 8-23 172-187 (277)
492 PF09419 PGP_phosphatase: Mito 20.1 2.4E+02 0.0052 20.6 4.4 28 33-60 62-91 (168)
493 cd03174 DRE_TIM_metallolyase D 20.0 4.1E+02 0.0089 20.4 7.0 47 6-54 115-165 (265)
No 1
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=100.00 E-value=2.8e-40 Score=256.24 Aligned_cols=206 Identities=31% Similarity=0.371 Sum_probs=185.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCC----CCCCCCCHHHHHHH
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFL----VPAEDLSPNGFRTV 75 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~ld~li~~ag~~~~----~~~~~~~~~~~~~~ 75 (218)
++|+.+++++..+++.+... ..++.||++++++++++++++.+.+ |++|++|||+|.... .++.+.+.++|++.
T Consensus 26 ~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~ 104 (241)
T PF13561_consen 26 TDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKT 104 (241)
T ss_dssp EESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHH
T ss_pred EeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHH
Confidence 36888887777777766432 3359999999999999999999999 999999999997765 78888999999999
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCC-CCeEE
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRV 154 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~-~gi~v 154 (218)
+++|+.+++.+++++.|.|.+ +|+||++||..+..+.+.+..|+++|+|+++|+|++|.||+ + +||||
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~----------~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~-~~~gIrV 173 (241)
T PF13561_consen 105 FDINVFSPFLLAQAALPLMKK----------GGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELA-PKKGIRV 173 (241)
T ss_dssp HHHHTHHHHHHHHHHHHHHHH----------EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHG-GHGTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhh----------CCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhc-cccCeee
Confidence 999999999999999998877 58899999999999999999999999999999999999999 8 99999
Q ss_pred eeeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+|.||++.|++.......+++.+......|++|+.+|+|+|++++||+|+.+.++||++|.+|
T Consensus 174 N~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vD 237 (241)
T PF13561_consen 174 NAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVD 237 (241)
T ss_dssp EEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEES
T ss_pred eeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEEC
Confidence 9999999999875544445677788889999999999999999999999999999999999988
No 2
>PRK08339 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1e-38 Score=250.46 Aligned_cols=208 Identities=21% Similarity=0.227 Sum_probs=184.0
Q ss_pred CCCcHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++.+. +.++.++.+|++|+++++++++++. ++|++|++|||+|.....++.+.+.++|++.+++|
T Consensus 38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n 116 (263)
T PRK08339 38 LSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLL 116 (263)
T ss_pred EeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 368889999998888764 5678899999999999999999986 58999999999998777788899999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.++++++|.|++++ .|+||++||..+..+.+.+..|+++|+|+.+|+++++.|++ ++|||||+|+|
T Consensus 117 ~~~~~~~~~~~l~~m~~~~--------~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~el~-~~gIrVn~v~P 187 (263)
T PRK08339 117 LYPAVYLTRALVPAMERKG--------FGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELG-PKGITVNGIMP 187 (263)
T ss_pred hHHHHHHHHHHHHHHHHcC--------CCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence 9999999999999998876 69999999999988889999999999999999999999999 99999999999
Q ss_pred CcccCCCccCC---------CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+++|++.... ...++..+.+....|++|+.+|+|+|+++.||+++++.+++|+.+.+|
T Consensus 188 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vd 255 (263)
T PRK08339 188 GIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVD 255 (263)
T ss_pred CcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEEC
Confidence 99999864321 111233344556678999999999999999999999999999999876
No 3
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=1.5e-38 Score=248.02 Aligned_cols=203 Identities=21% Similarity=0.171 Sum_probs=174.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE 77 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~~ 77 (218)
+|+ +++++..+++. +.++.+++||++++++++++++++.+++|++|++|||||...+ .++.+.+.++|+..++
T Consensus 40 ~r~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 116 (252)
T PRK06079 40 YQN-DRMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQD 116 (252)
T ss_pred cCc-hHHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhC
Confidence 566 34444444443 2367889999999999999999999999999999999997643 5778899999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee
Q 027828 78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157 (218)
Q Consensus 78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v 157 (218)
+|+.+++.++++++|.|.+ .|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|++ ++||+||+|
T Consensus 117 in~~~~~~l~~~~~~~~~~----------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~vn~i 185 (252)
T PRK06079 117 ISAYSLIAVAKYARPLLNP----------GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLG-KKGIRVNAI 185 (252)
T ss_pred cccHHHHHHHHHHHHhccc----------CceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEE
Confidence 9999999999999999863 58899999999988889999999999999999999999999 999999999
Q ss_pred ecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+||+++|++.......++..+......|.+|+.+|+|+|+++.||+++++.+++|+.|.+|
T Consensus 186 ~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vd 246 (252)
T PRK06079 186 SAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVD 246 (252)
T ss_pred ecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeC
Confidence 9999999865433223344455566778899999999999999999999999999999877
No 4
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=2.6e-38 Score=249.11 Aligned_cols=205 Identities=23% Similarity=0.211 Sum_probs=170.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIE 77 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~~ 77 (218)
+|+.+..+++.+...+.+. ..+++||++|.++++++++++.+++|++|++|||||.... .++.+.+.++|+++++
T Consensus 40 ~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~ 118 (271)
T PRK06505 40 YQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMV 118 (271)
T ss_pred cCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHh
Confidence 5665444443332223343 3578999999999999999999999999999999997643 4677899999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee
Q 027828 78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157 (218)
Q Consensus 78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v 157 (218)
+|+.+++.++++++|+|.+ .|+||++||..+..+.+.+..|+++|+|+.+|+|+|+.|++ ++|||||+|
T Consensus 119 vn~~~~~~l~~~~~~~m~~----------~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~-~~gIrVn~v 187 (271)
T PRK06505 119 ISCFSFTEIAKRAAKLMPD----------GGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYG-PQGIRVNAI 187 (271)
T ss_pred hhhhhHHHHHHHHHHhhcc----------CceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHHHHHh-hcCeEEEEE
Confidence 9999999999999999973 58999999999988889999999999999999999999999 999999999
Q ss_pred ecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+||++.|++...........+......|++|+.+|+|+|++++||+++.+.+++|+.|.+|
T Consensus 188 ~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vd 248 (271)
T PRK06505 188 SAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVD 248 (271)
T ss_pred ecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCceEEeec
Confidence 9999999864322122222333445678899999999999999999999999999999876
No 5
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=100.00 E-value=6e-39 Score=229.84 Aligned_cols=207 Identities=22% Similarity=0.234 Sum_probs=183.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+++.+..++++..|... ++-..+.||+++..+++..+++..+.+|+++++|||||+..+..+..+..++|+.++.+|+.
T Consensus 45 dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~ 123 (256)
T KOG1200|consen 45 DLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLT 123 (256)
T ss_pred ecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhch
Confidence 34555556666655432 35678999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
|.|..+|++.+.|...+.. ..+||+|||+.+..+..++..|+++|+++.+|+|++|+|++ +++||||.|.||+
T Consensus 124 gvfl~tqaa~r~~~~~~~~------~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaArEla-~knIrvN~VlPGF 196 (256)
T KOG1200|consen 124 GVFLVTQAAVRAMVMNQQQ------GLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARELA-RKNIRVNVVLPGF 196 (256)
T ss_pred hhHHHHHHHHHHHHHhcCC------CceEEeehhhhcccccccchhhhhhcCceeeeeHHHHHHHh-hcCceEeEecccc
Confidence 9999999999996554321 45999999999999999999999999999999999999999 9999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|.|||....+ +...+....-+|++|++.+||+|..+.||+|+.+.|++|+.+.+|
T Consensus 197 I~tpMT~~mp--~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~evt 251 (256)
T KOG1200|consen 197 IATPMTEAMP--PKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLEVT 251 (256)
T ss_pred ccChhhhhcC--HHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccceeEEEe
Confidence 9999876644 567778888899999999999999999999999999999987654
No 6
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=3.3e-38 Score=248.77 Aligned_cols=188 Identities=25% Similarity=0.187 Sum_probs=162.7
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHH
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYL 94 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 94 (218)
+.+ .+++||++|.++++++++++.+++|++|++|||||+... .++.+.+.++|++++++|+.+++.++++++|.|
T Consensus 55 ~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 133 (274)
T PRK08415 55 GSD-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLL 133 (274)
T ss_pred CCc-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 444 678999999999999999999999999999999997542 567889999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChH
Q 027828 95 KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE 174 (218)
Q Consensus 95 ~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~ 174 (218)
.+ .|+||++||.++..+.+.+..|+++|+|+.+|+++|+.|++ ++||+||+|+||+++|++........
T Consensus 134 ~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~ 202 (274)
T PRK08415 134 ND----------GASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLG-KKGIRVNAISAGPIKTLAASGIGDFR 202 (274)
T ss_pred cc----------CCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCccccHHHhccchhh
Confidence 65 47899999999988888999999999999999999999999 99999999999999997543211111
Q ss_pred HHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 175 EIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
..........|++|+.+|+|+|++++||+++.+.+++|+.|.+|
T Consensus 203 ~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vd 246 (274)
T PRK08415 203 MILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVD 246 (274)
T ss_pred HHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEc
Confidence 11222234568899999999999999999999999999999876
No 7
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=100.00 E-value=4e-38 Score=246.46 Aligned_cols=201 Identities=25% Similarity=0.256 Sum_probs=173.6
Q ss_pred HHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHhhhhhh
Q 027828 7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
+.++..+++.+.+.++.++.+|++|+++++++++.+.+++|++|++|||+|... ..++.+.+.++|++.+++|+.+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~ 125 (258)
T PRK07370 46 RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYS 125 (258)
T ss_pred hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHH
Confidence 445556666555556778999999999999999999999999999999999754 2567888999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.++++++|.|.+ .|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|++ ++||+||+|+||++
T Consensus 126 ~~~l~~~~~~~m~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~i~PG~v 194 (258)
T PRK07370 126 LAPLCKAAKPLMSE----------GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELG-PKNIRVNAISAGPI 194 (258)
T ss_pred HHHHHHHHHHHHhh----------CCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhC-cCCeEEEEEecCcc
Confidence 99999999999974 48899999999988889999999999999999999999999 99999999999999
Q ss_pred cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|++.......++..+......|++|+.+|+|+++++.||+++.+.+++|++|.+|
T Consensus 195 ~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vd 250 (258)
T PRK07370 195 RTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVD 250 (258)
T ss_pred cCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEEC
Confidence 99865322111233344455678899999999999999999999999999999876
No 8
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=100.00 E-value=9.5e-38 Score=243.47 Aligned_cols=202 Identities=27% Similarity=0.339 Sum_probs=178.0
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHH
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 88 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 88 (218)
++..+++.+.+.++.++.+|++++++++++++++.+.+|++|++|||||.....++.+.+.++|++.+++|+.+++.+++
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~ 123 (251)
T PRK12481 44 PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ 123 (251)
T ss_pred HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHH
Confidence 45556666667789999999999999999999999999999999999998877788889999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCcc
Q 027828 89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 168 (218)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~ 168 (218)
++.|.|++++. .|+||++||..+..+.+....|+++|+|+++++++++.|++ ++||+||+|+||++.|++..
T Consensus 124 ~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~girvn~v~PG~v~t~~~~ 195 (251)
T PRK12481 124 AVAKQFVKQGN-------GGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELS-QYNINVNAIAPGYMATDNTA 195 (251)
T ss_pred HHHHHHHHcCC-------CCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCCCccCchh
Confidence 99999987542 48999999999988888889999999999999999999999 99999999999999998755
Q ss_pred CCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.....+...+......|.+|+.+|+|+|+++.||+++.+.+++|+.|.+|
T Consensus 196 ~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vd 245 (251)
T PRK12481 196 ALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVD 245 (251)
T ss_pred hcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEEC
Confidence 43222333344556778999999999999999999999999999999886
No 9
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=7e-38 Score=245.50 Aligned_cols=202 Identities=20% Similarity=0.128 Sum_probs=170.9
Q ss_pred HHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----C-CCCCCHHHHHHHHhhhhh
Q 027828 7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~ 81 (218)
+.++..+++.........++||++|+++++++++.+.++++++|++|||||+.... + +.+.+.++|+.++++|+.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~ 122 (261)
T PRK08690 43 KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY 122 (261)
T ss_pred HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchH
Confidence 34444555544433456799999999999999999999999999999999976432 2 356788999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++++++++.|.|+++ .|+||++||.++..+.+.+..|+++|+|+.+|++.++.|++ ++||+||+|+||+
T Consensus 123 ~~~~l~~~~~p~m~~~---------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gIrVn~i~PG~ 192 (261)
T PRK08690 123 SLPALAKAARPMMRGR---------NSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLG-KEGIRCNGISAGP 192 (261)
T ss_pred HHHHHHHHHHHHhhhc---------CcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHHHHhh-hcCeEEEEEecCc
Confidence 9999999999998754 48899999999988889999999999999999999999999 9999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++.......+...+.+....|++|+.+|+|+|+++.||+++.+.+++|++|.+|
T Consensus 193 v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vd 249 (261)
T PRK08690 193 IKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVD 249 (261)
T ss_pred ccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEc
Confidence 999865432222333444556678999999999999999999999999999999876
No 10
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=7.3e-38 Score=245.28 Aligned_cols=204 Identities=22% Similarity=0.188 Sum_probs=171.5
Q ss_pred CCcHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHH
Q 027828 2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVI 76 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~ 76 (218)
+|+ +++++..+++.+. +. ..+++||++|+++++++++.+.+++|++|++|||+|.... .++.+.+.++|++.+
T Consensus 41 ~r~-~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~ 118 (260)
T PRK06603 41 YQS-EVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSL 118 (260)
T ss_pred eCc-hHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHH
Confidence 455 3344455555443 43 3467899999999999999999999999999999997542 467889999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
++|+.+++.+++++.|.|.+ +|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|++ ++||+||+
T Consensus 119 ~vn~~~~~~~~~~~~~~m~~----------~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~ 187 (260)
T PRK06603 119 HISCYSLLELSRSAEALMHD----------GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMG-ENNIRVNA 187 (260)
T ss_pred HHHHHHHHHHHHHHHhhhcc----------CceEEEEecCccccCCCcccchhhHHHHHHHHHHHHHHHhh-hcCeEEEE
Confidence 99999999999999999853 58999999999988889999999999999999999999999 99999999
Q ss_pred eecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+||+++|++.......++..+......|++|+.+|+|+|++++||+|+++.+++|++|.+|
T Consensus 188 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vd 249 (260)
T PRK06603 188 ISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVD 249 (260)
T ss_pred EecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeC
Confidence 99999999864321111223344555678999999999999999999999999999999876
No 11
>PRK07063 short chain dehydrogenase; Provisional
Probab=100.00 E-value=4.1e-37 Score=241.02 Aligned_cols=209 Identities=25% Similarity=0.359 Sum_probs=184.8
Q ss_pred CCCcHHHHHHHHHHHHh--cCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHS--LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
++|+.++++++.+++.. .+.++.++.||+++++++..+++++.+.++++|++|||||.....++.+.+.++|++++++
T Consensus 37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 116 (260)
T PRK07063 37 ADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAV 116 (260)
T ss_pred EeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHh
Confidence 36888899999999876 4567889999999999999999999999999999999999876667778899999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.++++++|.|++++ .|+||++||..+..+.+....|+++|+|+.++++.++.|++ ++||+||+|+
T Consensus 117 n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~-~~gIrvn~v~ 187 (260)
T PRK07063 117 DLDGAWNGCRAVLPGMVERG--------RGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYA-ARNVRVNAIA 187 (260)
T ss_pred hhHHHHHHHHHHHHHHHhhC--------CeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHhC-ccCeEEEEEe
Confidence 99999999999999998876 68999999999999999999999999999999999999999 8999999999
Q ss_pred cCcccCCCccCCC----ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||++.|++..... .+...........|++|+.+|+|+|.+++||+++.+.+++|+.|.+|
T Consensus 188 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vd 251 (260)
T PRK07063 188 PGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITID 251 (260)
T ss_pred eCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEEC
Confidence 9999998754221 11222334455678899999999999999999999999999999887
No 12
>PRK05867 short chain dehydrogenase; Provisional
Probab=100.00 E-value=6e-37 Score=239.19 Aligned_cols=207 Identities=24% Similarity=0.294 Sum_probs=181.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++...+.++..+.+|++++++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+
T Consensus 39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~ 118 (253)
T PRK05867 39 AARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNV 118 (253)
T ss_pred EcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcc
Confidence 36888999999999988777888999999999999999999999999999999999987777888899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC-c-chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~-~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
.+++.+++++.|.|.+++. .|+||++||..+.... + ....|+++|+|+++++++++.|++ ++||+||+|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~vn~i~ 190 (253)
T PRK05867 119 TGVFLTAQAAAKAMVKQGQ-------GGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELA-PHKIRVNSVS 190 (253)
T ss_pred hhHHHHHHHHHHHHHhcCC-------CcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHh-HhCeEEEEee
Confidence 9999999999999987642 4789999998876433 3 457899999999999999999999 9999999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||+++|++..... ...+.+....|++|+.+|+|+|++++||+++++.+++|+.|.+|
T Consensus 191 PG~v~t~~~~~~~---~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vd 247 (253)
T PRK05867 191 PGYILTELVEPYT---EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVID 247 (253)
T ss_pred cCCCCCcccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEEC
Confidence 9999998754321 22334455678899999999999999999999999999999887
No 13
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=2.9e-37 Score=241.87 Aligned_cols=186 Identities=23% Similarity=0.165 Sum_probs=161.1
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----C-CCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV----P-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 96 (218)
..++.||++|+++++++++.+.+++|++|++|||||..... + +.+.+.++|+..+++|+.+++.++++++|+|.+
T Consensus 58 ~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~ 137 (260)
T PRK06997 58 DLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD 137 (260)
T ss_pred cceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 35789999999999999999999999999999999976432 2 356788999999999999999999999999942
Q ss_pred cCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHH
Q 027828 97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176 (218)
Q Consensus 97 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~ 176 (218)
.|+||++||..+..+.+.+..|+++|+|+.+|+++++.|++ ++||+||+|+||+++|++.......++.
T Consensus 138 ----------~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~i~PG~v~T~~~~~~~~~~~~ 206 (260)
T PRK06997 138 ----------DASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLG-PKGIRANGISAGPIKTLAASGIKDFGKI 206 (260)
T ss_pred ----------CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeeCccccchhccccchhhH
Confidence 58899999999988888899999999999999999999999 9999999999999999754322111233
Q ss_pred HHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 177 ~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+......|++|+.+|+|+++++.||+++++.+++|++|.+|
T Consensus 207 ~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vd 248 (260)
T PRK06997 207 LDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVD 248 (260)
T ss_pred HHHHHhcCcccccCCHHHHHHHHHHHhCccccCcceeEEEEc
Confidence 334455678899999999999999999999999999999887
No 14
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=4.4e-37 Score=240.87 Aligned_cols=205 Identities=19% Similarity=0.135 Sum_probs=171.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-----CCCCCHHHHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-----AEDLSPNGFRTVI 76 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~-----~~~~~~~~~~~~~ 76 (218)
+|+ +++++..+++.....++.++.||++|+++++++++++.+.+|++|++|||||+....+ +.+.+.++|+..+
T Consensus 39 ~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~ 117 (262)
T PRK07984 39 YQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAH 117 (262)
T ss_pred ecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHh
Confidence 455 4555666667655456778999999999999999999999999999999999754322 5677899999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
++|+.+++.+++++.|.+. + +|+||++||.++..+.+.+..|+++|+|+.+|+|+++.|++ ++|||||+
T Consensus 118 ~~n~~~~~~~~~~~~~~~~-~---------~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~ 186 (262)
T PRK07984 118 DISSYSFVAMAKACRSMLN-P---------GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG-PEGVRVNA 186 (262)
T ss_pred hhhhHHHHHHHHHHHHHhc-C---------CcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCcEEee
Confidence 9999999999999988553 2 58899999999888889999999999999999999999999 99999999
Q ss_pred eecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+||+++|++...........+......|.+|+.+|+|++++++||+++.+.+++|+.|..|
T Consensus 187 i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vd 248 (262)
T PRK07984 187 ISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVD 248 (262)
T ss_pred eecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEEC
Confidence 99999999753321111223334455678899999999999999999999999999999876
No 15
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=2.8e-37 Score=241.51 Aligned_cols=202 Identities=20% Similarity=0.189 Sum_probs=172.2
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC----CCCCCCCCHHHHHHHHhhh
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF----LVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~----~~~~~~~~~~~~~~~~~~n 79 (218)
+.++++++.+++. +.++.++++|++|+++++.+++++.+++|++|++|||+|+.. ..++.+.+.++|+..+++|
T Consensus 45 ~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n 122 (257)
T PRK08594 45 LEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNIS 122 (257)
T ss_pred chHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhh
Confidence 3455666666553 457889999999999999999999999999999999999754 2567788999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.++++++|.|.+ .|+||++||..+..+.+.+..|+++|+|+.+|+++++.|++ ++||+||+|+|
T Consensus 123 ~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~P 191 (257)
T PRK08594 123 AYSLTAVAREAKKLMTE----------GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLG-KDGIRVNAISA 191 (257)
T ss_pred HHHHHHHHHHHHHhccc----------CceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCCEEeeeec
Confidence 99999999999999854 58999999999988888899999999999999999999999 99999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+++|++.......++..+......|++|+.+|+|+|++++||+++.+.+++|+++..|
T Consensus 192 G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~d 250 (257)
T PRK08594 192 GPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVD 250 (257)
T ss_pred CcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccceEEEEC
Confidence 99999853321111222334455678889999999999999999999999999998876
No 16
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=5.8e-37 Score=239.94 Aligned_cols=187 Identities=26% Similarity=0.264 Sum_probs=164.7
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 96 (218)
...++.||++|.++++++++++.+++|++|++|||||.... .++.+.+.++|++++++|+.+++.+++.++|.|++
T Consensus 61 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~ 140 (258)
T PRK07533 61 APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN 140 (258)
T ss_pred cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc
Confidence 35678999999999999999999999999999999997542 56778899999999999999999999999999953
Q ss_pred cCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHH
Q 027828 97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176 (218)
Q Consensus 97 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~ 176 (218)
.|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|++ ++||+||+|+||+++|++.......+..
T Consensus 141 ----------~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gI~Vn~v~PG~v~T~~~~~~~~~~~~ 209 (258)
T PRK07533 141 ----------GGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELG-PKGIRVHAISPGPLKTRAASGIDDFDAL 209 (258)
T ss_pred ----------CCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEecCCcCChhhhccCCcHHH
Confidence 58899999999888888999999999999999999999999 9999999999999999875432222233
Q ss_pred HHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 177 ~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+......|++|+.+|+|+|++++||+++++.+++|+.+.+|
T Consensus 210 ~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vd 251 (258)
T PRK07533 210 LEDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYID 251 (258)
T ss_pred HHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeC
Confidence 344556678899999999999999999999999999999876
No 17
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=7.8e-37 Score=240.83 Aligned_cols=187 Identities=24% Similarity=0.175 Sum_probs=162.0
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 96 (218)
...++++|++|+++++++++++.+++|++|++|||||+... .++.+.+.++|++.+++|+.+++.+++++.|.|.+
T Consensus 61 ~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~ 140 (272)
T PRK08159 61 AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD 140 (272)
T ss_pred CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 35678999999999999999999999999999999997642 56778899999999999999999999999998853
Q ss_pred cCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHH
Q 027828 97 GGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEI 176 (218)
Q Consensus 97 ~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~ 176 (218)
.|+||++||.++..+.|.+..|+++|+|+.+|+++|+.|+. ++||+||+|+||+++|++..........
T Consensus 141 ----------~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~PG~v~T~~~~~~~~~~~~ 209 (272)
T PRK08159 141 ----------GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLG-PKNIRVNAISAGPIKTLAASGIGDFRYI 209 (272)
T ss_pred ----------CceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHHHHhc-ccCeEEEEeecCCcCCHHHhcCCcchHH
Confidence 58999999998888889999999999999999999999999 9999999999999999764322111111
Q ss_pred HHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 177 ~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+......|++|+.+|+|+|++++||+++.+.+++|++|.+|
T Consensus 210 ~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vd 251 (272)
T PRK08159 210 LKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVD 251 (272)
T ss_pred HHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceEEEEC
Confidence 222233578889999999999999999999999999999876
No 18
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=100.00 E-value=1e-36 Score=227.63 Aligned_cols=191 Identities=25% Similarity=0.249 Sum_probs=170.2
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++|+++++++.+ .++..+..|++|.++++.+++.+.++|+++|+||||||.....++.+.+.++|+.++++|+
T Consensus 36 ~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni 113 (246)
T COG4221 36 AARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNV 113 (246)
T ss_pred EeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHH
Confidence 47999999999999976 6799999999999999999999999999999999999988779999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.|.++.+++++|.|.+++ .|.||++||+++..++|....|+++|+++.+|++.|+.|+. .++|||..|.||
T Consensus 114 ~G~l~~~~avLP~m~~r~--------~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~-g~~IRVt~I~PG 184 (246)
T COG4221 114 KGLLNGTRAVLPGMVERK--------SGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELA-GTGIRVTVISPG 184 (246)
T ss_pred HHHHHHHHHhhhHHHhcC--------CceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhc-CCCeeEEEecCc
Confidence 999999999999999998 79999999999999999999999999999999999999998 999999999999
Q ss_pred cccCCCccCCCCh--HHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 161 PIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 161 ~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
.+.|+.+...... .+..+.. .......+|+|+|+++.|.++.
T Consensus 185 ~v~~~~~s~v~~~g~~~~~~~~---y~~~~~l~p~dIA~~V~~~~~~ 228 (246)
T COG4221 185 LVETTEFSTVRFEGDDERADKV---YKGGTALTPEDIAEAVLFAATQ 228 (246)
T ss_pred eecceecccccCCchhhhHHHH---hccCCCCCHHHHHHHHHHHHhC
Confidence 9987755554433 2222222 1223456999999999999974
No 19
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-36 Score=236.69 Aligned_cols=209 Identities=24% Similarity=0.309 Sum_probs=188.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++...+.++.++.+|++++++++++++.+.++++++|++|||+|.....++.+.+.++|++.+++|+
T Consensus 39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 118 (254)
T PRK08085 39 NDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQ 118 (254)
T ss_pred EcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHh
Confidence 36888889999999887777788899999999999999999999999999999999987777888999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.+.+.+++ .++||++||..+..+.+....|+++|++++.++++++.|++ ++||++|+|+||
T Consensus 119 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pG 189 (254)
T PRK08085 119 TAVFLVSQAVARYMVKRQ--------AGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELA-RHNIQVNGIAPG 189 (254)
T ss_pred HHHHHHHHHHHHHHHHcC--------CcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeC
Confidence 999999999999998765 68999999999888888899999999999999999999998 999999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+++|++.......+.+.+......|++++.+|+|+++++.||+++.+.+++|+.|.+|
T Consensus 190 ~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~d 247 (254)
T PRK08085 190 YFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVD 247 (254)
T ss_pred CCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEEC
Confidence 9999876544333444555666788999999999999999999999999999999877
No 20
>PRK07478 short chain dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-36 Score=236.19 Aligned_cols=209 Identities=30% Similarity=0.355 Sum_probs=184.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++.+.+.++.++.||++++++++++++++.++++++|++|||||... ..++.+.+.++|++.+++|
T Consensus 36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N 115 (254)
T PRK07478 36 GARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATN 115 (254)
T ss_pred EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHH
Confidence 368889999999999887788999999999999999999999999999999999999764 3677888999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-cCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
+.+++.++++++|.|++++ .++||++||..+. .+.+.+..|+++|+|++.++++++.|+. ++||+|++|+
T Consensus 116 ~~~~~~~~~~~~~~l~~~~--------~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~ 186 (254)
T PRK07478 116 LTSAFLGAKHQIPAMLARG--------GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYG-AQGIRVNALL 186 (254)
T ss_pred hHHHHHHHHHHHHHHHhcC--------CceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCEEEEEEe
Confidence 9999999999999998876 6899999999876 4678889999999999999999999998 8999999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||+++|++.......+..........|.+++.+|+|+|+.++||+++.+.+++|+.|..|
T Consensus 187 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~d 246 (254)
T PRK07478 187 PGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVD 246 (254)
T ss_pred eCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeC
Confidence 999999875543322333334445567888999999999999999999999999998876
No 21
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-36 Score=237.45 Aligned_cols=209 Identities=13% Similarity=0.153 Sum_probs=180.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~--~~~~~~~~~~~~~~~~~~ 78 (218)
++|+.++++++.+++.+.+ ++.++.+|++|+++++++++++.++++++|+||||+|... +.++.+.+.++|.+.+++
T Consensus 30 ~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~ 108 (259)
T PRK08340 30 SSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALL 108 (259)
T ss_pred EeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhh
Confidence 3688889999999887654 6888999999999999999999999999999999999753 345778889999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.+++.++|.|.++.. .|+||++||..+..+.+....|+++|+|+.+++|+++.|+. ++||+||+|+
T Consensus 109 n~~~~~~~~~~~l~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~-~~gI~v~~v~ 180 (259)
T PRK08340 109 HLVAPGYLTTLLIQAWLEKKM-------KGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYG-GKGIRAYTVL 180 (259)
T ss_pred cchHHHHHHHHHHHHHHhcCC-------CCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEec
Confidence 999999999999999874321 68999999999988889999999999999999999999999 9999999999
Q ss_pred cCcccCCCccCCC---------C-hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKL---------A-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||+++|++..... . ++.+.+......|++|+.+|+|+|+++.||+|+++.+++|++|.+|
T Consensus 181 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vd 250 (259)
T PRK08340 181 LGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFD 250 (259)
T ss_pred cCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeec
Confidence 9999998753211 1 1122344556678999999999999999999999999999999876
No 22
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=100.00 E-value=3.1e-36 Score=235.31 Aligned_cols=209 Identities=32% Similarity=0.404 Sum_probs=179.4
Q ss_pred CCCcHHHHHHHHHHHHhcCC---CeeEEEecCCCHHHHHHHHHHHHHH-hCCccEEEeCCCCCCCC-CCCCCCHHHHHHH
Q 027828 1 MGRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAAGNFLV-PAEDLSPNGFRTV 75 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~---~~~~~~~D~s~~~~~~~~~~~~~~~-~~~ld~li~~ag~~~~~-~~~~~~~~~~~~~ 75 (218)
++|++++++.+..++...+. ++..+.||+++.++++++++...+. +|++|++|||||..... ++.+.+.++|+++
T Consensus 38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~ 117 (270)
T KOG0725|consen 38 TGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKI 117 (270)
T ss_pred EeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHH
Confidence 47999999999999887643 5899999999999999999999998 79999999999987654 7999999999999
Q ss_pred Hhhhhhh-HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcch-hHhHHhHHHHHHHHHHHHhhhcCCCCeE
Q 027828 76 IEIDSVG-TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ-IHVSAAKAAVDSITRSLALEWGTDYAIR 153 (218)
Q Consensus 76 ~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~a~~~~~~~la~el~~~~gi~ 153 (218)
+++|++| .+.+.+.+.+.+++++ .|.|+++||..+..+.+.. ..|+++|+|+++|+|++|.||. ++|||
T Consensus 118 ~~~Nl~G~~~~~~~~a~~~~~~~~--------gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~-~~gIR 188 (270)
T KOG0725|consen 118 MATNLRGSAFCLKQAARPMLKKSK--------GGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELA-KHGIR 188 (270)
T ss_pred HhhhchhHHHHHHHHHHHHHHhcC--------CceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHh-hcCcE
Confidence 9999995 7777777777777766 7999999999988876666 7999999999999999999999 99999
Q ss_pred EeeeecCcccCCCccCCCCh---HHHHHh--hhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 154 VNGIAPGPIKDTAGVSKLAP---EEIRSK--ATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 154 v~~v~pG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||+|.||++.|+........ +++.+. .....|.+|..+|+|+++.+.||+++++.|++|++|.+|
T Consensus 189 vN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vd 258 (270)
T KOG0725|consen 189 VNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVD 258 (270)
T ss_pred EEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCcccccccCCEEEEe
Confidence 99999999999872222222 233333 345678999999999999999999998889999999987
No 23
>PRK06114 short chain dehydrogenase; Provisional
Probab=100.00 E-value=7.3e-36 Score=233.21 Aligned_cols=207 Identities=28% Similarity=0.383 Sum_probs=180.6
Q ss_pred CCcH-HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~-~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+. ..++++.+++...+.++.++.+|++++++++++++++.++++++|++|||+|.....++.+.+.++|++.+++|+
T Consensus 39 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 118 (254)
T PRK06114 39 DLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINL 118 (254)
T ss_pred eCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcc
Confidence 4544 356778888877777888999999999999999999999999999999999987777888899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcc--hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY--QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~--~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
.+++.++++++|.|++++ .++||++||..+..+.+. +..|+++|+|+.+++++++.|+. ++||+||+|+
T Consensus 119 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~ 189 (254)
T PRK06114 119 TGVFLSCQAEARAMLENG--------GGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWV-GRGIRVNSIS 189 (254)
T ss_pred hhhHHHHHHHHHHHHhcC--------CcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEe
Confidence 999999999999998876 689999999988766553 68999999999999999999998 9999999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||+++|++...... ....+.+....|++|+.+|+|++++++||+++.+.+++|++|.+|
T Consensus 190 PG~i~t~~~~~~~~-~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~d 248 (254)
T PRK06114 190 PGYTATPMNTRPEM-VHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVD 248 (254)
T ss_pred ecCccCcccccccc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEEEC
Confidence 99999987543111 122344556788999999999999999999999999999999876
No 24
>PRK07062 short chain dehydrogenase; Provisional
Probab=100.00 E-value=8.3e-36 Score=234.23 Aligned_cols=209 Identities=22% Similarity=0.241 Sum_probs=183.0
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
++|+.++++++.+++.+. +.++.++.+|++|.+++.++++++.+.++++|++|||||.....++.+.+.++|++.+++
T Consensus 38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T PRK07062 38 CGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELEL 117 (265)
T ss_pred EeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 368888999988888765 347888999999999999999999999999999999999877778889999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.+++.++|.|++++ .|+||++||..+..+.+....|+++|+|+.+++++++.|+. ++||+||+|+
T Consensus 118 n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la~e~~-~~gi~v~~i~ 188 (265)
T PRK07062 118 KYFSVINPTRAFLPLLRASA--------AASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELA-PKGVRVNSIL 188 (265)
T ss_pred HhHHHHHHHHHHHHHHhccC--------CcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEe
Confidence 99999999999999999876 68999999999998889999999999999999999999998 8999999999
Q ss_pred cCcccCCCccCCC--------ChHHHHHhh--hhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKL--------APEEIRSKA--TDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~--------~~~~~~~~~--~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||+++|++..... ....+.+.. ....|++|+.+|+|+|++++||+++.+.+++|+.|..|
T Consensus 189 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vd 258 (265)
T PRK07062 189 LGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVS 258 (265)
T ss_pred cCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEc
Confidence 9999998754211 111222211 24578899999999999999999999999999999876
No 25
>PRK08589 short chain dehydrogenase; Validated
Probab=100.00 E-value=9.3e-36 Score=234.85 Aligned_cols=206 Identities=26% Similarity=0.331 Sum_probs=179.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+ ++++++.+++.+.+.++.++.||+++++++..+++++.+.+|++|+||||||.... .++.+.+.+.|++++++|+
T Consensus 37 ~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~ 115 (272)
T PRK08589 37 DIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDM 115 (272)
T ss_pred eCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence 577 77888888887777789999999999999999999999999999999999998643 5777889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.++++++|.|+++ +|+||++||..+..+.+....|+++|+|+++|+++++.|+. ++||+||+|+||
T Consensus 116 ~~~~~~~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v~PG 185 (272)
T PRK08589 116 RGTFLMTKMLLPLMMEQ---------GGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYG-RDGIRANAIAPG 185 (272)
T ss_pred HHHHHHHHHHHHHHHHc---------CCEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecC
Confidence 99999999999999875 48999999999998888899999999999999999999998 899999999999
Q ss_pred cccCCCccCCCC--hHH----HHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLA--PEE----IRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+++|++...... +.. +........|.+++.+|+|+|++++||+++...+++|+.|.+|
T Consensus 186 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vd 249 (272)
T PRK08589 186 TIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRID 249 (272)
T ss_pred cccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEEC
Confidence 999987543221 111 1122223467888999999999999999999999999998876
No 26
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=100.00 E-value=7.3e-36 Score=233.11 Aligned_cols=202 Identities=28% Similarity=0.375 Sum_probs=177.1
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHH
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 88 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 88 (218)
++..+++...+.++..+++|+++.++++++++++.++++++|++|||||.....++.+.+.++|++.+++|+.+++.+++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 125 (253)
T PRK08993 46 TETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ 125 (253)
T ss_pred HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence 44555565556678899999999999999999999999999999999998777778889999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCcc
Q 027828 89 EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 168 (218)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~ 168 (218)
++.|.|.+++. .|+||++||..+..+.+....|+++|+|+++++++++.|+. ++||+||.|+||+++|++..
T Consensus 126 ~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pG~v~T~~~~ 197 (253)
T PRK08993 126 AAAKHFIAQGN-------GGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWA-KHNINVNAIAPGYMATNNTQ 197 (253)
T ss_pred HHHHHHHhCCC-------CeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCcccCcchh
Confidence 99999987642 48999999999988888889999999999999999999998 99999999999999998754
Q ss_pred CCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.....+...+......|.+|+.+|+|+|+.+.||+++.+.+++|+++.+|
T Consensus 198 ~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~d 247 (253)
T PRK08993 198 QLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVD 247 (253)
T ss_pred hhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 33222333334556778899999999999999999999999999999887
No 27
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=100.00 E-value=8.7e-36 Score=233.55 Aligned_cols=207 Identities=24% Similarity=0.280 Sum_probs=181.6
Q ss_pred CcHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC------CCCCCCCCHHHHHHH
Q 027828 3 RRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF------LVPAEDLSPNGFRTV 75 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~------~~~~~~~~~~~~~~~ 75 (218)
|+.++++++.+++... +.++.++.+|++|+++++++++++.+.++++|++|||||... ..++.+.+.++|++.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T PRK08416 41 SNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNI 120 (260)
T ss_pred CCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHH
Confidence 5677788888887654 568899999999999999999999999999999999998642 356677889999999
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
+++|+.+++.+++.++|.|++++ .|+||++||..+..+.+.+..|+++|+|+++++++|+.|+. ++||+||
T Consensus 121 ~~~n~~~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gi~v~ 191 (260)
T PRK08416 121 YTATVNAFVVGAQEAAKRMEKVG--------GGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELG-EKNIRVN 191 (260)
T ss_pred HhhhhHHHHHHHHHHHHhhhccC--------CEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhh-hhCeEEE
Confidence 99999999999999999998765 68999999999888888999999999999999999999998 9999999
Q ss_pred eeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|+||+++|++.......++..+......|.+|+.+|+|+|++++||+++.+.+++|+.+.+|
T Consensus 192 ~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vd 254 (260)
T PRK08416 192 AVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVD 254 (260)
T ss_pred EEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEc
Confidence 999999999975543333444455566678899999999999999999999999999999876
No 28
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=100.00 E-value=6.4e-36 Score=237.39 Aligned_cols=206 Identities=25% Similarity=0.199 Sum_probs=170.9
Q ss_pred CCcHHHHHHHHHHHHhc----------CC---CeeEEEecC--CC------------------HHHHHHHHHHHHHHhCC
Q 027828 2 GRRKTVLRSAVAALHSL----------GI---PAIGLEGDV--RK------------------REDAVRVVESTINHFGK 48 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~----------~~---~~~~~~~D~--s~------------------~~~~~~~~~~~~~~~~~ 48 (218)
+|+.++|+++...+++. +. ....+.+|+ ++ +++++.+++++.+++|+
T Consensus 41 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~ 120 (303)
T PLN02730 41 GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGS 120 (303)
T ss_pred EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCC
Confidence 36777888887777531 11 146788999 43 44899999999999999
Q ss_pred ccEEEeCCCCCC--CCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcch-
Q 027828 49 LDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ- 125 (218)
Q Consensus 49 ld~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~- 125 (218)
+|+||||||... ..++.+.+.++|++++++|+.+++.++++++|.|++ .|+||++||..+..+.|.+
T Consensus 121 iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~----------~G~II~isS~a~~~~~p~~~ 190 (303)
T PLN02730 121 IDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNP----------GGASISLTYIASERIIPGYG 190 (303)
T ss_pred CCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc----------CCEEEEEechhhcCCCCCCc
Confidence 999999998543 368889999999999999999999999999999975 4889999999988888865
Q ss_pred hHhHHhHHHHHHHHHHHHhhhcCC-CCeEEeeeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhcc
Q 027828 126 IHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204 (218)
Q Consensus 126 ~~y~~sK~a~~~~~~~la~el~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s 204 (218)
..|+++|+|+.+|+++|+.|++ + +|||||+|+||++.|++.......++..+......|++|+.+|+|++.+++||+|
T Consensus 191 ~~Y~asKaAl~~l~~~la~El~-~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS 269 (303)
T PLN02730 191 GGMSSAKAALESDTRVLAFEAG-RKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLAS 269 (303)
T ss_pred hhhHHHHHHHHHHHHHHHHHhC-cCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 5899999999999999999998 6 7999999999999999765422122333333445678899999999999999999
Q ss_pred CCCccccccccccC
Q 027828 205 DAAVHRDLIHLLDD 218 (218)
Q Consensus 205 ~~~~~~~g~~i~~d 218 (218)
+.+.+++|+.+.+|
T Consensus 270 ~~a~~itG~~l~vd 283 (303)
T PLN02730 270 PLASAITGATIYVD 283 (303)
T ss_pred ccccCccCCEEEEC
Confidence 99999999998876
No 29
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=100.00 E-value=3.1e-35 Score=229.95 Aligned_cols=200 Identities=23% Similarity=0.251 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHH
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 84 (218)
.+.++++.+++.+.|.++.++.+|+++.+++.++++++.+.+|++|++|||+|.....++.+.+.++|++.+++|+.+++
T Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 132 (256)
T PRK12859 53 QDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATT 132 (256)
T ss_pred HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHH
Confidence 45566677778777888999999999999999999999999999999999999877778899999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccC
Q 027828 85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164 (218)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t 164 (218)
.++++++|.|.+++ .|+||++||..+..+.+++..|+++|++++.|+++++.|+. ++||+|++|+||+++|
T Consensus 133 ~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~PG~i~t 203 (256)
T PRK12859 133 LLSSQFARGFDKKS--------GGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVA-HLGITVNAINPGPTDT 203 (256)
T ss_pred HHHHHHHHHHhhcC--------CeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEEccccC
Confidence 99999999998766 68999999999998899999999999999999999999998 8999999999999998
Q ss_pred CCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.. +...+.+....|.++..+|+|+|+++.||+++.+.+++|+.+.+|
T Consensus 204 ~~~~-----~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~d 252 (256)
T PRK12859 204 GWMT-----EEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSE 252 (256)
T ss_pred CCCC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence 7532 233344555667888899999999999999999999999999887
No 30
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-35 Score=230.53 Aligned_cols=207 Identities=28% Similarity=0.352 Sum_probs=182.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+ ++++++.+++.+.+.++.++.||+++.++++++++++.+.+|++|++|||+|.....++.+.+.++|++.+++|+.
T Consensus 46 ~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 124 (258)
T PRK06935 46 THG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLN 124 (258)
T ss_pred eCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCH
Confidence 455 5567777777666778899999999999999999999999999999999999877778888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.|.|++++ .|+||++||..+..+.+.+..|+++|+|+++++++++.|+. ++||+||.|+||+
T Consensus 125 ~~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gi~v~~i~PG~ 195 (258)
T PRK06935 125 SVYHLSQAVAKVMAKQG--------SGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELA-AYNIQVNAIAPGY 195 (258)
T ss_pred HHHHHHHHHHHHHHhcC--------CeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecc
Confidence 99999999999999876 68999999999988888999999999999999999999998 9999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++.......+...+......|.+++.+|+|+++.+.||+++.+.+++|+.|.+|
T Consensus 196 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 252 (258)
T PRK06935 196 IKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVD 252 (258)
T ss_pred ccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEEC
Confidence 999865433322333344556678899999999999999999999999999999876
No 31
>PRK07985 oxidoreductase; Provisional
Probab=100.00 E-value=2.8e-35 Score=234.40 Aligned_cols=204 Identities=24% Similarity=0.276 Sum_probs=178.3
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhhhhh
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
+.+.++++.+.+...+.++.++.+|+++.+++..+++++.+.++++|++|||||... ..++.+.+.++|++.+++|+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g 163 (294)
T PRK07985 84 EEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFA 163 (294)
T ss_pred chhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHH
Confidence 345567777777666778889999999999999999999999999999999999753 3567888999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.+++++.|.|.+ .++||++||..+..+.+.+..|+++|+|++++++.++.|++ ++||+||+|+||++
T Consensus 164 ~~~l~~~~~~~m~~----------~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~i~PG~v 232 (294)
T PRK07985 164 LFWLTQEAIPLLPK----------GASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA-EKGIRVNIVAPGPI 232 (294)
T ss_pred HHHHHHHHHHhhhc----------CCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHh-HhCcEEEEEECCcC
Confidence 99999999999864 57899999999998888999999999999999999999998 89999999999999
Q ss_pred cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|++......+++..+.+....|++++.+|+|+|++++||+++++.+++|+.|.+|
T Consensus 233 ~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vd 288 (294)
T PRK07985 233 WTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVC 288 (294)
T ss_pred ccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEeeC
Confidence 99975332223334445666788899999999999999999999999999999876
No 32
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=100.00 E-value=3.4e-35 Score=232.28 Aligned_cols=208 Identities=29% Similarity=0.357 Sum_probs=182.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC---------------CCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---------------VPAED 66 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~---------------~~~~~ 66 (218)
+|+.+.++++.+++.+.+.++.++++|+++++++..+++++.++++++|++|||+|...+ .++.+
T Consensus 41 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~ 120 (278)
T PRK08277 41 DRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFD 120 (278)
T ss_pred eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccccccccccccccccccc
Confidence 688888888888888777788999999999999999999999999999999999996432 34677
Q ss_pred CCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhh
Q 027828 67 LSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146 (218)
Q Consensus 67 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el 146 (218)
.+.++|++.+++|+.+++.+++++.|.|.+++ .|+||++||..+..+.+....|+++|+|++.++++++.|+
T Consensus 121 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~ 192 (278)
T PRK08277 121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK--------GGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHF 192 (278)
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC--------CcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999998876 6899999999999999999999999999999999999999
Q ss_pred cCCCCeEEeeeecCcccCCCccCCCC-----hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC-CCccccccccccC
Q 027828 147 GTDYAIRVNGIAPGPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AAVHRDLIHLLDD 218 (218)
Q Consensus 147 ~~~~gi~v~~v~pG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~-~~~~~~g~~i~~d 218 (218)
. ++||+||+|+||++.|++...... .....+......|++|+.+|+|+|++++||+++ .+.+++|++|.+|
T Consensus 193 ~-~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vd 269 (278)
T PRK08277 193 A-KVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVD 269 (278)
T ss_pred C-ccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEEC
Confidence 8 899999999999999986432211 122334445567899999999999999999999 8999999999887
No 33
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=1.3e-35 Score=232.05 Aligned_cols=198 Identities=22% Similarity=0.151 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHhhhhh
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~ 81 (218)
+.++++.+++ +.++.++.+|++|+++++++++++.+.+|++|++|||||+... .++.+.++++|++++++|+.
T Consensus 46 ~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~ 122 (256)
T PRK07889 46 RLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAY 122 (256)
T ss_pred hHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhH
Confidence 4455555544 3367789999999999999999999999999999999997643 35778899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.++++++|+|.+ .|+||++++.. ..+.+.+..|+++|+|+.+|+++|+.|++ ++||+||+|+||+
T Consensus 123 ~~~~l~~~~~~~m~~----------~g~Iv~is~~~-~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrvn~v~PG~ 190 (256)
T PRK07889 123 SLKSLAKALLPLMNE----------GGSIVGLDFDA-TVAWPAYDWMGVAKAALESTNRYLARDLG-PRGIRVNLVAAGP 190 (256)
T ss_pred HHHHHHHHHHHhccc----------CceEEEEeecc-cccCCccchhHHHHHHHHHHHHHHHHHhh-hcCeEEEeeccCc
Confidence 999999999999974 57899998753 45667888899999999999999999999 9999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCC-CCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++.......+...+.+....|++ ++.+|+|+|++++||+++.+.+++|+.+.+|
T Consensus 191 v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vd 248 (256)
T PRK07889 191 IRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVD 248 (256)
T ss_pred ccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccceEEEEc
Confidence 99987543222233333444566777 5899999999999999999999999998876
No 34
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.1e-35 Score=229.07 Aligned_cols=208 Identities=26% Similarity=0.368 Sum_probs=187.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|++++++++.+++...|.++.++.+|++|.++++.+++.+.+.++++|++|||+|...+.++.+.+.++|++.+++|+.
T Consensus 41 ~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (255)
T PRK07523 41 GRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNIS 120 (255)
T ss_pred eCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 68888888888888877778999999999999999999999999999999999999887788889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.+.|.+++ .|+||++||..+..+.+++..|+++|++++.+++.++.|++ ++||+|++|+||+
T Consensus 121 ~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~ 191 (255)
T PRK07523 121 SVFYVGQAVARHMIARG--------AGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWA-KHGLQCNAIAPGY 191 (255)
T ss_pred HHHHHHHHHHHHHHHhC--------CeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECc
Confidence 99999999999998876 68999999999888889999999999999999999999998 8999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++.......+.+.+.+....|++++.+|+|+|++++||+++++.+++|+.+.+|
T Consensus 192 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~ 248 (255)
T PRK07523 192 FDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVD 248 (255)
T ss_pred ccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEEC
Confidence 999875443333445556666788899999999999999999999999999998876
No 35
>PRK12747 short chain dehydrogenase; Provisional
Probab=100.00 E-value=8e-35 Score=227.05 Aligned_cols=205 Identities=27% Similarity=0.272 Sum_probs=176.1
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHH----hC--CccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH----FG--KLDILVNAAAGNFLVPAEDLSPNGFRTVI 76 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~----~~--~ld~li~~ag~~~~~~~~~~~~~~~~~~~ 76 (218)
|+.++++++.+++...+.++..+.+|+++.+++..+++++.+. ++ ++|+||||||.....++.+.+.++|++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~ 116 (252)
T PRK12747 37 NRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMV 116 (252)
T ss_pred CCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHH
Confidence 5677788888888877778889999999999999999988763 34 89999999998766778889999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
++|+.+++.++++++|.|++ .|+||++||..+..+.+....|+++|+|+++++++++.|+. ++||+||+
T Consensus 117 ~vN~~~~~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~girvn~ 185 (252)
T PRK12747 117 SVNAKAPFFIIQQALSRLRD----------NSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLG-ARGITVNA 185 (252)
T ss_pred HHhhhHHHHHHHHHHHHhhc----------CCeEEEECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHh-HcCCEEEE
Confidence 99999999999999999975 57899999999999999999999999999999999999998 99999999
Q ss_pred eecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+||++.|++.......+..........|++++.+|+|+|+++.||+++.+.+++|+.+..|
T Consensus 186 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vd 247 (252)
T PRK12747 186 ILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVS 247 (252)
T ss_pred EecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEec
Confidence 99999999875433222222222223346788999999999999999999999999998876
No 36
>PRK07791 short chain dehydrogenase; Provisional
Probab=100.00 E-value=5.6e-35 Score=231.87 Aligned_cols=204 Identities=21% Similarity=0.228 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHH
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 84 (218)
.+.++++.+++...+.++.++.+|++|.+++.++++.+.+.+|++|++|||||+....++.+.+.++|++.+++|+.+++
T Consensus 49 ~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~ 128 (286)
T PRK07791 49 GSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHF 128 (286)
T ss_pred hhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHH
Confidence 37788888888877788899999999999999999999999999999999999877778889999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccC
Q 027828 85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164 (218)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t 164 (218)
.++++++|+|+++.... ....|+||++||..+..+.+.+..|+++|+|+.+|+++++.|++ ++||+||+|+|| +.|
T Consensus 129 ~l~~~~~~~~~~~~~~~--~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~-~~gIrVn~v~Pg-~~T 204 (286)
T PRK07791 129 ATLRHAAAYWRAESKAG--RAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELG-RYGVTVNAIAPA-ART 204 (286)
T ss_pred HHHHHHHHHHHHhcccC--CCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHHH-HhCeEEEEECCC-CCC
Confidence 99999999998642100 00137999999999999999999999999999999999999999 999999999999 777
Q ss_pred CCccCCCChHHHHHhhhhhcCCC--CCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 165 TAGVSKLAPEEIRSKATDYMAAY--KFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.... ........+.+ +..+|+|+|++++||+++.+.+++|+.|.+|
T Consensus 205 ~~~~~~------~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vd 254 (286)
T PRK07791 205 RMTETV------FAEMMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVE 254 (286)
T ss_pred Ccchhh------HHHHHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEc
Confidence 753211 11122223333 3579999999999999999999999999876
No 37
>PRK06172 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1e-34 Score=226.56 Aligned_cols=209 Identities=24% Similarity=0.280 Sum_probs=186.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n 79 (218)
++|+.+.+++..+++.+.+.++.++.+|+++.+++.++++.+.+.++++|++|||+|.... .++.+.+.++|++.+++|
T Consensus 37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n 116 (253)
T PRK06172 37 ADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVN 116 (253)
T ss_pred EeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHh
Confidence 3688888888888888777789999999999999999999999999999999999997654 457788999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.++++++|.|.+++ .++||++||..+..+.+.+..|+++|+|+++++++++.|+. ++||+|++|+|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~i~P 187 (253)
T PRK06172 117 VKGVWLCMKYQIPLMLAQG--------GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYA-KKGIRVNAVCP 187 (253)
T ss_pred hHHHHHHHHHHHHHHHhcC--------CcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEe
Confidence 9999999999999998765 68999999999999999999999999999999999999998 88999999999
Q ss_pred CcccCCCccCCCC-hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+++|++...... .+.....+....|.+|..+|+|+++.++||+++.+.+++|+.|..|
T Consensus 188 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~d 247 (253)
T PRK06172 188 AVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVD 247 (253)
T ss_pred CCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence 9999997654322 3444555666778889999999999999999999999999999876
No 38
>PRK08643 acetoin reductase; Validated
Probab=100.00 E-value=1.2e-34 Score=226.46 Aligned_cols=209 Identities=24% Similarity=0.260 Sum_probs=184.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++.+.+.++.++.+|++++++++++++++.++++++|++|||+|.....++.+.+.++|+.++++|+.
T Consensus 33 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 112 (256)
T PRK08643 33 DYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVG 112 (256)
T ss_pred eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 68888888998888877778899999999999999999999999999999999999877778888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.+.+.|++.+. .++||++||..+..+.+....|+++|++++.+++.++.|+. ++||+|++|+||+
T Consensus 113 ~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~ 184 (256)
T PRK08643 113 GVIWGIQAAQEAFKKLGH-------GGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLA-SEGITVNAYAPGI 184 (256)
T ss_pred HHHHHHHHHHHHHHhcCC-------CCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeeCC
Confidence 999999999999987542 47999999999988889999999999999999999999998 9999999999999
Q ss_pred ccCCCccCCC---------ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++..... ........+....+.+++.+|+|+|+++.||+++.+.+++|+.|.+|
T Consensus 185 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vd 250 (256)
T PRK08643 185 VKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVD 250 (256)
T ss_pred CcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeC
Confidence 9998754311 11112334555678889999999999999999999999999999887
No 39
>PRK07831 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-34 Score=226.46 Aligned_cols=208 Identities=26% Similarity=0.376 Sum_probs=183.8
Q ss_pred CCcHHHHHHHHHHHHh-cC-CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHS-LG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~-~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+|+.+++++..+++++ .+ .++.++++|++++++++.+++.+.+.+|++|++|||+|.....++.+.+.++|++.+++|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n 128 (262)
T PRK07831 49 DIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVT 128 (262)
T ss_pred eCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence 5788888888888876 34 468899999999999999999999999999999999998777788899999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.++++++|.|+.+.. .|+||+++|..+..+.+++..|+++|+|++++++.++.|+. ++||+||+|+|
T Consensus 129 ~~~~~~l~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~-~~gI~v~~i~P 200 (262)
T PRK07831 129 LTGTFRATRAALRYMRARGH-------GGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAA-EYGVRINAVAP 200 (262)
T ss_pred hHHHHHHHHHHHHHHHhcCC-------CcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhC-ccCeEEEEEee
Confidence 99999999999999987532 48999999999888888999999999999999999999998 99999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.|++..... +++..+.+....+++|+.+|+|+|++++||+++.+.+++|+.|.+|
T Consensus 201 g~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~ 258 (262)
T PRK07831 201 SIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVS 258 (262)
T ss_pred CCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeC
Confidence 999998754432 3344445556678899999999999999999999999999999876
No 40
>PRK07677 short chain dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-34 Score=224.61 Aligned_cols=210 Identities=40% Similarity=0.563 Sum_probs=181.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++.+.+.++.++.+|++++++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.
T Consensus 32 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (252)
T PRK07677 32 GRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLN 111 (252)
T ss_pred eCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhH
Confidence 68888888888888776678899999999999999999999999999999999999766667788999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.++++++++|.+... .|+||++||..+..+.+....|+++|+|+++++++|+.|+.+.+||+|++|+||+
T Consensus 112 ~~~~l~~~~~~~~~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~ 184 (252)
T PRK07677 112 GTFYCSQAVGKYWIEKGI-------KGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGP 184 (252)
T ss_pred HHHHHHHHHHHHHHhcCC-------CEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecc
Confidence 999999999999876431 5899999999988888888999999999999999999999724799999999999
Q ss_pred ccCCCccCC-CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSK-LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|+..... ...+...+...+..+.+++.+|+|+++++.||+++...+++|+.+..|
T Consensus 185 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 242 (252)
T PRK07677 185 IERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMD 242 (252)
T ss_pred cccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEEEC
Confidence 996543221 123344455556678889999999999999999998899999998876
No 41
>PRK06940 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-34 Score=229.01 Aligned_cols=199 Identities=22% Similarity=0.201 Sum_probs=168.2
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++...+.++.++.||++|.+++.++++.+ ++++++|+||||||... ..++|+..+++|+
T Consensus 30 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~li~nAG~~~-------~~~~~~~~~~vN~ 101 (275)
T PRK06940 30 ADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVTGLVHTAGVSP-------SQASPEAILKVDL 101 (275)
T ss_pred EeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCEEEECCCcCC-------chhhHHHHHHHhh
Confidence 368888888888888777778899999999999999999988 56899999999999742 2357999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC------------------------------cchhHhHH
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT------------------------------WYQIHVSA 130 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~------------------------------~~~~~y~~ 130 (218)
.+++++++++.|.|.+ .|++|++||..+..+. +.+..|++
T Consensus 102 ~g~~~l~~~~~~~m~~----------~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~a 171 (275)
T PRK06940 102 YGTALVLEEFGKVIAP----------GGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQI 171 (275)
T ss_pred HHHHHHHHHHHHHHhh----------CCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHH
Confidence 9999999999999975 4668999998876542 24678999
Q ss_pred hHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCC--ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCc
Q 027828 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV 208 (218)
Q Consensus 131 sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~ 208 (218)
+|+|+..+++.++.|+. ++||+||+|+||++.|++..... ..++..+......|++|+.+|+|+|++++||+|+.+.
T Consensus 172 sKaa~~~~~~~la~e~~-~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~ 250 (275)
T PRK06940 172 AKRANALRVMAEAVKWG-ERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGS 250 (275)
T ss_pred HHHHHHHHHHHHHHHHc-cCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccC
Confidence 99999999999999998 99999999999999999754322 1123334445567889999999999999999999999
Q ss_pred cccccccccC
Q 027828 209 HRDLIHLLDD 218 (218)
Q Consensus 209 ~~~g~~i~~d 218 (218)
+++|+.|.+|
T Consensus 251 ~itG~~i~vd 260 (275)
T PRK06940 251 FITGSDFLVD 260 (275)
T ss_pred cccCceEEEc
Confidence 9999999877
No 42
>PRK06128 oxidoreductase; Provisional
Probab=100.00 E-value=2.2e-34 Score=229.97 Aligned_cols=203 Identities=24% Similarity=0.311 Sum_probs=178.5
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhhhhhH
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
...++++.+++...+.++.++.||+++.++++++++++.+.++++|+||||||... ..++.+.+.++|++.+++|+.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~ 170 (300)
T PRK06128 91 EQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAM 170 (300)
T ss_pred hHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 34566777788777778899999999999999999999999999999999999754 35688899999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
++++++++|.|.+ .++||++||..++.+.+.+..|+++|+|++.|++.++.|+. ++||+||+|+||+++
T Consensus 171 ~~l~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~-~~gI~v~~v~PG~i~ 239 (300)
T PRK06128 171 FWLCKAAIPHLPP----------GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVA-EKGIRVNAVAPGPVW 239 (300)
T ss_pred HHHHHHHHHhcCc----------CCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEECcCc
Confidence 9999999999864 57899999999998889999999999999999999999998 899999999999999
Q ss_pred CCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.......++..+.+....|++|+.+|+|+|.+++||+++.+.+++|+.+.+|
T Consensus 240 t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~ 294 (300)
T PRK06128 240 TPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVT 294 (300)
T ss_pred CCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeC
Confidence 9875432223344455556788999999999999999999999999999998876
No 43
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=100.00 E-value=4.8e-34 Score=223.77 Aligned_cols=207 Identities=29% Similarity=0.433 Sum_probs=183.1
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
+.+.++++.+++...+.++.++.+|+++.++++++++.+.+.++++|++|||+|...+.++.+.+.++|++.+++|+.++
T Consensus 41 ~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~ 120 (261)
T PRK08936 41 DEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGA 120 (261)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHH
Confidence 45567778888877777888999999999999999999999999999999999988777888899999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
+.+++.+++.|.+++. .|+||++||..+..+.+.+..|+++|+|+..++++++.|+. ++||+|++|+||+++
T Consensus 121 ~~~~~~~l~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~ 192 (261)
T PRK08936 121 FLGSREAIKYFVEHDI-------KGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYA-PKGIRVNNIGPGAIN 192 (261)
T ss_pred HHHHHHHHHHHHhcCC-------CcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECcCC
Confidence 9999999999987642 58999999999888889999999999999999999999998 889999999999999
Q ss_pred CCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.......++.........|.+++.+|+|+++.+.||+++.+.+++|++|.+|
T Consensus 193 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d 247 (261)
T PRK08936 193 TPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLFAD 247 (261)
T ss_pred CCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEEC
Confidence 9975544333333444556678889999999999999999999999999998876
No 44
>PRK07035 short chain dehydrogenase; Provisional
Probab=100.00 E-value=4.4e-34 Score=222.85 Aligned_cols=209 Identities=29% Similarity=0.326 Sum_probs=185.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++.+.+.++.++.+|+++.++++++++++.+.++++|++|||+|... ..++.+.+.++|++.+++|
T Consensus 38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n 117 (252)
T PRK07035 38 SSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVN 117 (252)
T ss_pred EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHh
Confidence 368888889999988877778889999999999999999999999999999999999643 3567788999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.++++++|+|++.+ .++||++||..+..+.++++.|+++|+++++++++++.|+. ++||+|++|+|
T Consensus 118 ~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~i~P 188 (252)
T PRK07035 118 IRGYFFMSVEAGKLMKEQG--------GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA-PFGIRVNALLP 188 (252)
T ss_pred hHHHHHHHHHHHHHHHhCC--------CcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCEEEEEEee
Confidence 9999999999999998766 68999999999988889999999999999999999999998 99999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.|++.......+...+......|.+++.+|+|+|+.++||+++...+++|+.+.+|
T Consensus 189 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~d 247 (252)
T PRK07035 189 GLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVD 247 (252)
T ss_pred ccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeC
Confidence 99999875544333444555666778889999999999999999999999999998876
No 45
>PRK09242 tropinone reductase; Provisional
Probab=100.00 E-value=4.6e-34 Score=223.36 Aligned_cols=209 Identities=27% Similarity=0.330 Sum_probs=186.7
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
++|+.+.++++.+++... +.++.++.+|+++.++++.+++.+.+.++++|+||||+|.....++.+.+.++|++.+++
T Consensus 39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~ 118 (257)
T PRK09242 39 VARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFET 118 (257)
T ss_pred EeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhh
Confidence 368888899988888765 568889999999999999999999999999999999999876677788999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.+++++.|.|++++ .++||++||..+..+.+....|+++|++++.++++++.|+. ++||++++|.
T Consensus 119 n~~~~~~l~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~ 189 (257)
T PRK09242 119 NLFSAFELSRYAHPLLKQHA--------SSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWA-EDGIRVNAVA 189 (257)
T ss_pred hhHHHHHHHHHHHHHHHhcC--------CceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHHHHHH-HhCeEEEEEE
Confidence 99999999999999998876 68999999999988888999999999999999999999998 8899999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||++.|++.......+...+......|.+++.+|+|++.++.||+++...+++|+.|..|
T Consensus 190 Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~ 249 (257)
T PRK09242 190 PWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVD 249 (257)
T ss_pred ECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEEC
Confidence 999999986554444455555556778889999999999999999988889999998876
No 46
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=100.00 E-value=2.2e-34 Score=220.74 Aligned_cols=190 Identities=24% Similarity=0.234 Sum_probs=171.0
Q ss_pred CCCcHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
++|++++|+++.++++.. +.++.++.+|+++++++..+.++++++.+.||+||||||+...+++.+.++++.++++++|
T Consensus 36 vaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN 115 (265)
T COG0300 36 VARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLN 115 (265)
T ss_pred EeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHH
Confidence 589999999999999875 6789999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+...++++++|.|.+++ .|.||+|+|.+++.+.|..+.|+++|+++.+|+++|+.|+. ++||+|.+++|
T Consensus 116 ~~a~~~LT~~~lp~m~~~~--------~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~-~~gV~V~~v~P 186 (265)
T COG0300 116 ILALTRLTKAVLPGMVERG--------AGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELK-GTGVKVTAVCP 186 (265)
T ss_pred HHHHHHHHHHHHHHHHhcC--------CceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEEEec
Confidence 9999999999999999988 79999999999999999999999999999999999999998 99999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
|++.|+++...... .....+.....+|+++|+.++..+..
T Consensus 187 G~~~T~f~~~~~~~------~~~~~~~~~~~~~~~va~~~~~~l~~ 226 (265)
T COG0300 187 GPTRTEFFDAKGSD------VYLLSPGELVLSPEDVAEAALKALEK 226 (265)
T ss_pred Cccccccccccccc------cccccchhhccCHHHHHHHHHHHHhc
Confidence 99999876521111 11112233467999999999988864
No 47
>PRK08265 short chain dehydrogenase; Provisional
Probab=100.00 E-value=4.4e-34 Score=224.03 Aligned_cols=203 Identities=23% Similarity=0.258 Sum_probs=173.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++ +.++.++.||+++.+++.++++.+.+.++++|++|||+|...... .+.+.++|++.+++|+.
T Consensus 37 ~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~~~-~~~~~~~~~~~~~~n~~ 112 (261)
T PRK08265 37 DIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDG-LASSRADWLAALDVNLV 112 (261)
T ss_pred eCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCc-CcCCHHHHHHHHhHhhH
Confidence 67877777777665 457889999999999999999999999999999999999765444 35788999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.|.|+ ++ .|+||++||..+..+.+.+..|+++|+++.++++.++.|+. ++||+||+|+||+
T Consensus 113 ~~~~~~~~~~~~~~-~~--------~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~vn~v~PG~ 182 (261)
T PRK08265 113 SAAMLAQAAHPHLA-RG--------GGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLA-PDGIRVNSVSPGW 182 (261)
T ss_pred HHHHHHHHHHHHHh-cC--------CcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCEEEEEEccCC
Confidence 99999999999997 44 68999999999999999999999999999999999999998 8999999999999
Q ss_pred ccCCCccCCCC-hHHHHHhh-hhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLA-PEEIRSKA-TDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++...... .....+.. ....|++|+.+|+|+|+++.||+++.+.+++|+.|.+|
T Consensus 183 ~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vd 241 (261)
T PRK08265 183 TWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVD 241 (261)
T ss_pred ccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEEEEC
Confidence 99987543221 11111222 23467889999999999999999999999999999876
No 48
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=100.00 E-value=7.2e-34 Score=222.13 Aligned_cols=209 Identities=29% Similarity=0.325 Sum_probs=188.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.+.++++.+++...+.++.++.||+++++++.++++.+.+.++++|++|||+|.....++.+.+.++|++.+++|+
T Consensus 41 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 120 (256)
T PRK06124 41 NGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDL 120 (256)
T ss_pred EeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence 36888888888888887777899999999999999999999999999999999999987777888999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+.+.+++.|.+++ .++||++||..+..+.+++..|+++|+++..+++.++.|+. ++||++++|+||
T Consensus 121 ~~~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg 191 (256)
T PRK06124 121 VAPILLSRLAAQRMKRQG--------YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFG-PHGITSNAIAPG 191 (256)
T ss_pred HHHHHHHHHHHHHHHhcC--------CcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHHHH-HhCcEEEEEEEC
Confidence 999999999999998776 68999999999998999999999999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+++|+.......++...+.+....+.+++.+|+|++++++||+++.+.+++|..|.+|
T Consensus 192 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~d 249 (256)
T PRK06124 192 YFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVD 249 (256)
T ss_pred CccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEEC
Confidence 9999875443334455555666778889999999999999999999999999998876
No 49
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=100.00 E-value=9.4e-34 Score=220.42 Aligned_cols=203 Identities=30% Similarity=0.391 Sum_probs=176.1
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
.+++.+.+...+.++.++.+|+++.+++..+++++.+.++++|++|||+|.....++.+.+.++|++++++|+.+++.++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 119 (248)
T TIGR01832 40 PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLT 119 (248)
T ss_pred HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence 34556666666678899999999999999999999999999999999999887777888899999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCc
Q 027828 88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167 (218)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~ 167 (218)
+++.|.|.+++. .|+||++||..+..+.+....|+++|+++++++++++.|+. ++||+||+|+||++.|++.
T Consensus 120 ~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~pg~v~t~~~ 191 (248)
T TIGR01832 120 QAAAKHFLKQGR-------GGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEWA-AKGINVNAIAPGYMATNNT 191 (248)
T ss_pred HHHHHHHHhcCC-------CeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHhC-ccCcEEEEEEECcCcCcch
Confidence 999999987531 47999999999888888889999999999999999999998 9999999999999999875
Q ss_pred cCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
..........+......|.+++.+|+|+|+++.||+++.+.+++|+.+..|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~d 242 (248)
T TIGR01832 192 QALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVD 242 (248)
T ss_pred hccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeC
Confidence 433222233334455678889999999999999999999999999999876
No 50
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=100.00 E-value=1.4e-33 Score=220.51 Aligned_cols=206 Identities=29% Similarity=0.393 Sum_probs=182.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+.++++.+++...+.++.++.+|+++.+++.++++.+.+.++++|++|||+|...+.++ +.+.++|+..+++|+.
T Consensus 42 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~ 120 (255)
T PRK06113 42 DINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRAYELNVF 120 (255)
T ss_pred eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHhhh
Confidence 578888888888887777788999999999999999999999999999999999997665554 6788999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.|.|.+.+ .++||++||..+..+.+++..|+++|+|+++++++++.++. ++||+||.|+||+
T Consensus 121 ~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~ 191 (255)
T PRK06113 121 SFFHLSQLVAPEMEKNG--------GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG-EKNIRVNGIAPGA 191 (255)
T ss_pred hHHHHHHHHHHHHHhcC--------CcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeccc
Confidence 99999999999998765 68999999999998888999999999999999999999998 8999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++...... +..........+.+++.+|+|++++++||+++.+.+++|+.|.+|
T Consensus 192 ~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~ 247 (255)
T PRK06113 192 ILTDALKSVIT-PEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVS 247 (255)
T ss_pred ccccccccccC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence 99987654333 333444556677888999999999999999999999999999876
No 51
>PRK08303 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1.8e-34 Score=230.52 Aligned_cols=202 Identities=20% Similarity=0.180 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC-CCCC----CCCCCCCCHHHHHHHHhhh
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA-AGNF----LVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~a-g~~~----~~~~~~~~~~~~~~~~~~n 79 (218)
+++++++.+++...+.++.+++||++++++++++++++.+++|++|++|||+ |... ..++.+.+.++|++++++|
T Consensus 52 ~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n 131 (305)
T PRK08303 52 PETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLA 131 (305)
T ss_pred cchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHh
Confidence 3567778888877777888999999999999999999999999999999999 7431 2567788899999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc---CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
+.+++.++++++|.|.+++ .|+||++||..+.. +.+....|+++|+|+.+|+++|+.|++ ++||+||+
T Consensus 132 ~~~~~~~~~~~lp~m~~~~--------~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~-~~gIrVn~ 202 (305)
T PRK08303 132 IDTHLITSHFALPLLIRRP--------GGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELA-PHGATAVA 202 (305)
T ss_pred hHHHHHHHHHHHHHhhhCC--------CcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEE
Confidence 9999999999999998765 68999999976543 234567899999999999999999999 99999999
Q ss_pred eecCcccCCCccCCC--ChHHHHHhhhhhcC-CCCCCCHHHHHHHHHHhccCCC-ccccccccc
Q 027828 157 IAPGPIKDTAGVSKL--APEEIRSKATDYMA-AYKFGEKWDIAMAALYLASDAA-VHRDLIHLL 216 (218)
Q Consensus 157 v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~e~a~~~~~L~s~~~-~~~~g~~i~ 216 (218)
|+||++.|++..... .+..+... ....| .++..+|+|+|++++||+++.. .+++|+.|.
T Consensus 203 v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~ 265 (305)
T PRK08303 203 LTPGWLRSEMMLDAFGVTEENWRDA-LAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS 265 (305)
T ss_pred ecCCccccHHHHHhhccCccchhhh-hccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence 999999998743211 11111111 22345 4677899999999999999874 689999875
No 52
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-36 Score=212.94 Aligned_cols=203 Identities=23% Similarity=0.273 Sum_probs=185.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+++.|+.+.++.. .-+..+++|++..+.+.+++.. .+++|++|||||+....+|.+++.++|++.|++|+
T Consensus 37 vaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~----v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNv 109 (245)
T KOG1207|consen 37 VARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVP----VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNV 109 (245)
T ss_pred EecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhcc----cCchhhhhccchhhhcchHHHHhHHhhcceeeeee
Confidence 4689999998888763 3488899999998877666554 47999999999998889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
++.+..+|...+.+..+.. .|.||++||.++.++..+...|+++|+|+++++|.||.|++ +++||||.++|-
T Consensus 110 ravi~v~Q~var~lv~R~~-------~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELG-p~kIRVNsVNPT 181 (245)
T KOG1207|consen 110 RAVILVAQLVARNLVDRQI-------KGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELG-PQKIRVNSVNPT 181 (245)
T ss_pred eeeeeHHHHHHHhhhhccC-------CceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhC-cceeEeeccCCe
Confidence 9999999998888776654 68899999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+-|.|....+.++.....+..++|++|+...+|+.+++.||+|+.+.+.+|+++++|
T Consensus 182 VVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGstlpve 239 (245)
T KOG1207|consen 182 VVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVE 239 (245)
T ss_pred EEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCceeeec
Confidence 9999999999999998899999999999999999999999999999999999999875
No 53
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.8e-33 Score=221.00 Aligned_cols=208 Identities=29% Similarity=0.371 Sum_probs=183.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+++++..+++...+.++.+++||+++.++++++++++.+.++++|+||||+|...+.++.+.+.++|++++++|+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (265)
T PRK07097 41 DINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLN 120 (265)
T ss_pred eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhH
Confidence 57888888888888877778999999999999999999999999999999999999887788889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+.+.++|+|++.+ .++||++||..+..+.+.+..|+++|+++..++++++.|+. ++||+|++|.||+
T Consensus 121 ~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~-~~gi~v~~v~Pg~ 191 (265)
T PRK07097 121 APFIVSKAVIPSMIKKG--------HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYG-EANIQCNGIGPGY 191 (265)
T ss_pred HHHHHHHHHHHHHHhcC--------CcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHHhh-hcCceEEEEEecc
Confidence 99999999999998866 68999999998888888899999999999999999999998 8999999999999
Q ss_pred ccCCCccCCC------ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++..... ....+.+......|.+++.+|+|+|+.+.||+++...+++|+.+..|
T Consensus 192 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 254 (265)
T PRK07097 192 IATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVD 254 (265)
T ss_pred ccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEEC
Confidence 9998654321 11222333445567788999999999999999998899999988765
No 54
>PRK06125 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-33 Score=221.00 Aligned_cols=205 Identities=22% Similarity=0.221 Sum_probs=177.7
Q ss_pred CCCcHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++.+. +.++.++.+|++++++++.+++. ++++|++|||+|.....++.+.+.++|+.++++|
T Consensus 37 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n 112 (259)
T PRK06125 37 VARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELK 112 (259)
T ss_pred EeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHh
Confidence 368888898888888764 56788999999999999888764 5899999999998777888999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.++++++|.|.+++ .|+||++||..+..+.+.+..|+++|+|+.+++++++.|+. ++||+||+|+|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~e~~-~~gi~v~~i~P 183 (259)
T PRK06125 113 VFGYIDLTRLAYPRMKARG--------SGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSL-DDGVRVVGVNP 183 (259)
T ss_pred hHHHHHHHHHHHHHHHHcC--------CcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHHHhC-ccCeEEEEEec
Confidence 9999999999999998876 68999999999988888888999999999999999999998 99999999999
Q ss_pred CcccCCCccCC--------CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSK--------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+++|++.... ..+++.++.+....|.+++.+|+|+|++++||+++.+.+++|+.|.+|
T Consensus 184 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vd 250 (259)
T PRK06125 184 GPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVD 250 (259)
T ss_pred CccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEec
Confidence 99999853221 112233344555678889999999999999999999999999999876
No 55
>PRK12743 oxidoreductase; Provisional
Probab=100.00 E-value=3.7e-33 Score=218.18 Aligned_cols=206 Identities=24% Similarity=0.336 Sum_probs=182.6
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
|+.+.++++.+++...+.++.++.+|++++++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|+.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 114 (256)
T PRK12743 35 SDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDG 114 (256)
T ss_pred CChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHH
Confidence 56777888888888878889999999999999999999999999999999999998776778888999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.+++++.+.|.+++. .|+||++||..+..+.++...|+++|+++.+++++++.++. ++||++++|+||++
T Consensus 115 ~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~~v~Pg~~ 186 (256)
T PRK12743 115 AFLCSQIAARHMVKQGQ-------GGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELV-EHGILVNAVAPGAI 186 (256)
T ss_pred HHHHHHHHHHHHHhcCC-------CeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeCCc
Confidence 99999999999987542 48999999999988899999999999999999999999998 89999999999999
Q ss_pred cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|++.... .+..........|.++..+|+|+++++.||+++...+++|..+..|
T Consensus 187 ~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~d 240 (256)
T PRK12743 187 ATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVD 240 (256)
T ss_pred cCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence 99865432 2333334455678888999999999999999999999999998876
No 56
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=8.4e-34 Score=225.20 Aligned_cols=175 Identities=27% Similarity=0.252 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceE
Q 027828 33 EDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGII 110 (218)
Q Consensus 33 ~~~~~~~~~~~~~~~~ld~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i 110 (218)
++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++++++|.|++ .|+|
T Consensus 104 ~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~----------~G~i 173 (299)
T PRK06300 104 YTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNP----------GGST 173 (299)
T ss_pred HHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc----------CCeE
Confidence 3689999999999999999999999654 468889999999999999999999999999999975 4789
Q ss_pred EEecccccccCCcchh-HhHHhHHHHHHHHHHHHhhhcCC-CCeEEeeeecCcccCCCccCCCChHHHHHhhhhhcCCCC
Q 027828 111 INISATLHYTATWYQI-HVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYK 188 (218)
Q Consensus 111 v~iss~~~~~~~~~~~-~y~~sK~a~~~~~~~la~el~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 188 (218)
|+++|..+..+.|.+. .|+++|+|+.+|+++|+.|++ + +|||||+|+||++.|++.......+...+......|++|
T Consensus 174 i~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~-~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r 252 (299)
T PRK06300 174 ISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAG-RRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPE 252 (299)
T ss_pred EEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCC
Confidence 9999999988888764 899999999999999999998 6 599999999999999875332112233344455678889
Q ss_pred CCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 189 FGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 189 ~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
..+|+|++..++||+|+.+.+++|+.+.+|
T Consensus 253 ~~~peevA~~v~~L~s~~~~~itG~~i~vd 282 (299)
T PRK06300 253 PMEAEQVGAAAAFLVSPLASAITGETLYVD 282 (299)
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEEC
Confidence 999999999999999999999999998876
No 57
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-33 Score=221.87 Aligned_cols=203 Identities=25% Similarity=0.243 Sum_probs=172.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHH----HHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNG----FRTVI 76 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~----~~~~~ 76 (218)
+|+.++++++.+++ +.++.++++|++++++++.+++++.+.++++|++|||+|+.. ..++.+.+.++ |++++
T Consensus 37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~ 113 (263)
T PRK06200 37 ERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIF 113 (263)
T ss_pred eCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHe
Confidence 67887777776655 456888999999999999999999999999999999999764 34566666665 88999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
++|+.+++.++++++|.|+++ .|+||+++|..+..+.++...|+++|+|++.++++++.|++ + +|+||+
T Consensus 114 ~~n~~~~~~~~~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~-~Irvn~ 182 (263)
T PRK06200 114 NVNVKGYLLGAKAALPALKAS---------GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELA-P-KIRVNG 182 (263)
T ss_pred eeccHhHHHHHHHHHHHHHhc---------CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHh-c-CcEEEE
Confidence 999999999999999998765 58999999999988888889999999999999999999998 7 499999
Q ss_pred eecCcccCCCccCCC---------ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC-CccccccccccC
Q 027828 157 IAPGPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA-AVHRDLIHLLDD 218 (218)
Q Consensus 157 v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~-~~~~~g~~i~~d 218 (218)
|.||++.|++..... ..+...+......|++|+.+|+|+|++++||+++. +.+++|+.|.+|
T Consensus 183 i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vd 254 (263)
T PRK06200 183 VAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINAD 254 (263)
T ss_pred EeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEc
Confidence 999999998753211 11223344556788999999999999999999998 999999999876
No 58
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=100.00 E-value=3.3e-33 Score=218.29 Aligned_cols=189 Identities=30% Similarity=0.391 Sum_probs=166.2
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|++|+++++++++++.+.++++|+||||+|.....++.+.+.++|++.+++|+.+++.+++.++|.|++++
T Consensus 52 ~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-- 129 (255)
T PRK06463 52 GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-- 129 (255)
T ss_pred CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--
Confidence 477899999999999999999999999999999999987667788889999999999999999999999999998765
Q ss_pred CCCCCCCceEEEeccccccc-CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCCh---HHH
Q 027828 101 QASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP---EEI 176 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~-~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~---~~~ 176 (218)
.|+||++||..+.. +.+....|+++|+|+++++++++.|+. ++||+||+|+||+++|++......+ ...
T Consensus 130 ------~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~ 202 (255)
T PRK06463 130 ------NGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELG-KYGIRVNAVAPGWVETDMTLSGKSQEEAEKL 202 (255)
T ss_pred ------CcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCCCCchhhcccCccchHHH
Confidence 68999999988775 346778899999999999999999998 8999999999999999875432211 233
Q ss_pred HHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 177 RSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 177 ~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+.+....+++++.+|+|+|++++||+++.+.+++|+.+..|
T Consensus 203 ~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~d 244 (255)
T PRK06463 203 RELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVAD 244 (255)
T ss_pred HHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEEC
Confidence 344556678889999999999999999999999999998876
No 59
>PRK06398 aldose dehydrogenase; Validated
Probab=100.00 E-value=5.3e-33 Score=217.58 Aligned_cols=188 Identities=24% Similarity=0.351 Sum_probs=165.2
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.||++++++++++++++.++++++|+||||||.....++.+.+.++|++++++|+.+++.++++++|+|++.+
T Consensus 45 ~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-- 122 (258)
T PRK06398 45 DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-- 122 (258)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--
Confidence 356789999999999999999999999999999999987778888999999999999999999999999999998766
Q ss_pred CCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCC------ChH
Q 027828 101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------APE 174 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~------~~~ 174 (218)
.|+||++||..+..+.+++..|+++|+|++.++++++.|+. ++ |+||+|+||+++|++..... .+.
T Consensus 123 ------~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~-~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~ 194 (258)
T PRK06398 123 ------KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYA-PT-IRCVAVCPGSIRTPLLEWAAELEVGKDPE 194 (258)
T ss_pred ------CeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhC-CC-CEEEEEecCCccchHHhhhhhccccCChh
Confidence 68999999999998889999999999999999999999998 75 99999999999998653311 111
Q ss_pred H---HHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 175 E---IRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 175 ~---~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
. ....+....|++++.+|+|+|++++||+++.+.+++|+.+.+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~d 241 (258)
T PRK06398 195 HVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVD 241 (258)
T ss_pred hhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEC
Confidence 1 1122344568889999999999999999999999999999876
No 60
>PRK06484 short chain dehydrogenase; Validated
Probab=100.00 E-value=3e-33 Score=238.98 Aligned_cols=203 Identities=27% Similarity=0.349 Sum_probs=177.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.++++++.+++ +.++..+.+|++|+++++++++++.+.+|++|+||||||... ..++.+.+.++|++++++|+
T Consensus 300 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~ 376 (520)
T PRK06484 300 DRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNL 376 (520)
T ss_pred eCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCc
Confidence 68888888777665 456788999999999999999999999999999999999764 35778899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.++++++++++|+|. + .|+||++||..+..+.+++..|+++|+++++|+++++.|+. ++||+||+|+||
T Consensus 377 ~~~~~~~~~~~~~~~--~--------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~v~PG 445 (520)
T PRK06484 377 SGAFACARAAARLMS--Q--------GGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWA-PAGIRVNTVAPG 445 (520)
T ss_pred HHHHHHHHHHHHHhc--c--------CCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEeC
Confidence 999999999999993 2 58999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCccCCCC-hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.|++...... .....+.+....|++++.+|+|+|++++||+++.+.+++|+.+.+|
T Consensus 446 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vd 504 (520)
T PRK06484 446 YIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVD 504 (520)
T ss_pred CccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 999987543221 1222344556778889999999999999999999999999999876
No 61
>PRK08226 short chain dehydrogenase; Provisional
Probab=100.00 E-value=6.9e-33 Score=217.39 Aligned_cols=207 Identities=23% Similarity=0.271 Sum_probs=177.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+ .++..+++...+.++.++.||++++++++++++++.++++++|++|||+|.....++.+.+.+++++.+++|+.
T Consensus 37 ~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 115 (263)
T PRK08226 37 DISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIK 115 (263)
T ss_pred cCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence 56654 44555666655678889999999999999999999999999999999999877778888999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc-ccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH-YTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~-~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
+++.+++++.|.|++.+ .++||++||..+ ..+.+.+..|+++|++++++++.++.|+. ++||+|++|+||
T Consensus 116 ~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~i~pg 186 (263)
T PRK08226 116 GVWNVTKAVLPEMIARK--------DGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYA-QSGIRVNAICPG 186 (263)
T ss_pred HHHHHHHHHHHHHHhcC--------CcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence 99999999999998765 689999999877 45667888999999999999999999998 889999999999
Q ss_pred cccCCCccCCC------ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKL------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+++|++..... ..++.........|++++.+|+|+|+.+.||+++.+.+++|++|.+|
T Consensus 187 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~d 250 (263)
T PRK08226 187 YVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVID 250 (263)
T ss_pred cccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeEC
Confidence 99998754321 12334445556678889999999999999999999999999999887
No 62
>PRK06949 short chain dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-32 Score=213.87 Aligned_cols=216 Identities=26% Similarity=0.327 Sum_probs=186.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++...+.++.++.+|+++.+++.++++++.+.++++|++|||+|.....++.+.+.++|+.++++|+
T Consensus 39 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 118 (258)
T PRK06949 39 ASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNT 118 (258)
T ss_pred EeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcc
Confidence 36888899999888877777889999999999999999999999999999999999987767778888999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.|.|.++..+.......+++|++||..+..+.+....|+++|++++.+++.++.++. ++||+|++|+||
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pG 197 (258)
T PRK06949 119 RGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWG-RHGINVNAICPG 197 (258)
T ss_pred hhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEeeC
Confidence 9999999999999987643221222258999999999888888889999999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+++|++....+.. ..........+.++...|+|+++.+.||+++.+.+++|+.|..|
T Consensus 198 ~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~d 254 (258)
T PRK06949 198 YIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISAD 254 (258)
T ss_pred CCcCCcchhccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeC
Confidence 9999875543322 22334556678889999999999999999999999999999877
No 63
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=100.00 E-value=1.5e-32 Score=212.51 Aligned_cols=204 Identities=25% Similarity=0.212 Sum_probs=178.5
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
|+.+.++++.+++++.+.++.++.+|+++.+++..+++++.+.++++|++|||+|.....++.+.+.++|+.++++|+.+
T Consensus 31 ~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 110 (239)
T TIGR01831 31 SGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDG 110 (239)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHH
Confidence 34567788888888777789999999999999999999999999999999999998777777888999999999999999
Q ss_pred HHHHHHHHHHHH-HhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 83 TFIMCHEALKYL-KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 83 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
++.+++++.+.+ ++++ .++||++||..+..+.+.+..|+++|+++..++++++.|+. ++||+++.|+||+
T Consensus 111 ~~~l~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg~ 181 (239)
T TIGR01831 111 FYNVIHPCTMPMIRARQ--------GGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELA-KRKITVNCIAPGL 181 (239)
T ss_pred HHHHHHHHHHHHHhhcC--------CeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEEcc
Confidence 999999886544 4444 68999999999999999999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++..... + .........|+++..+|+|+++.+.||+++.+.+++|..|..|
T Consensus 182 v~t~~~~~~~--~-~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 235 (239)
T TIGR01831 182 IDTEMLAEVE--H-DLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVN 235 (239)
T ss_pred Cccccchhhh--H-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence 9998765321 2 2233455678899999999999999999999999999998876
No 64
>PRK07856 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-32 Score=215.03 Aligned_cols=191 Identities=27% Similarity=0.358 Sum_probs=169.1
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
+.++.++++|++++++++++++.+.+.++++|++|||+|.....++.+.+.++|++.+++|+.+++.+++++.|.|.++.
T Consensus 46 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 125 (252)
T PRK07856 46 GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQP 125 (252)
T ss_pred CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence 44678899999999999999999999999999999999987767788889999999999999999999999999998753
Q ss_pred CCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHH
Q 027828 99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~ 178 (218)
. .|+||++||..+..+.+.+..|+++|+++++|++.++.|+. ++ |++++|+||+++|++.......+....
T Consensus 126 ~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~ 196 (252)
T PRK07856 126 G-------GGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWA-PK-VRVNAVVVGLVRTEQSELHYGDAEGIA 196 (252)
T ss_pred C-------CcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhc-CC-eEEEEEEeccccChHHhhhccCHHHHH
Confidence 1 58999999999999999999999999999999999999998 77 999999999999987544333333344
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 179 KATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 179 ~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+....|+++..+|+|+|+.++||+++.+.+++|+.|.+|
T Consensus 197 ~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vd 236 (252)
T PRK07856 197 AVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVH 236 (252)
T ss_pred HHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEEC
Confidence 4556678899999999999999999999999999999876
No 65
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=100.00 E-value=2.4e-32 Score=212.68 Aligned_cols=208 Identities=27% Similarity=0.333 Sum_probs=184.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.++++..+.++.++.+|+++++++..+++++.+.++++|+||||+|.....++.+.+.++|+..+++|+.
T Consensus 36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 115 (250)
T PRK08063 36 ARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAK 115 (250)
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhH
Confidence 57888888888888877788999999999999999999999999999999999999877778889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.+.|++++ .|+||++||..+..+.+....|+++|++++.++++++.|+. ++||++++|+||+
T Consensus 116 ~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~pg~ 186 (250)
T PRK08063 116 ALLFCAQEAAKLMEKVG--------GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELA-PKGIAVNAVSGGA 186 (250)
T ss_pred HHHHHHHHHHHHHHhcC--------CeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHh-HhCeEEEeEecCc
Confidence 99999999999998876 68999999998888888889999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++..................+.++..+++|+|+.+++++++...+++|..+..|
T Consensus 187 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~ 243 (250)
T PRK08063 187 VDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVD 243 (250)
T ss_pred ccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence 998875443333444444555567778899999999999999988888999988765
No 66
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=2e-32 Score=214.46 Aligned_cols=205 Identities=26% Similarity=0.371 Sum_probs=172.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+. .++++.+++...+.++.++.+|+++.+++.++++++.+.++++|++|||||... ..++.+.+.++|++.+++|+
T Consensus 39 ~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~ 117 (260)
T PRK12823 39 DRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSL 117 (260)
T ss_pred eCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHh
Confidence 5654 355677777766778889999999999999999999999999999999999643 46788899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++++++.++|.|++++ .|+||++||..+.. +....|+++|+|++.|++.++.|++ ++||+|++|+||
T Consensus 118 ~~~~~~~~~~~~~~~~~~--------~g~iv~~sS~~~~~--~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~Pg 186 (260)
T PRK12823 118 FPTLWCCRAVLPHMLAQG--------GGAIVNVSSIATRG--INRVPYSAAKGGVNALTASLAFEYA-EHGIRVNAVAPG 186 (260)
T ss_pred HHHHHHHHHHHHHHHhcC--------CCeEEEEcCccccC--CCCCccHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence 999999999999998876 68999999987642 3456799999999999999999998 899999999999
Q ss_pred cccCCCccCC-------C----ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSK-------L----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+++|++.... . ..+.+.+......|++++.+|+|+|+++.||+++.+.+++|+.+..|
T Consensus 187 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~ 255 (260)
T PRK12823 187 GTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVG 255 (260)
T ss_pred ccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeec
Confidence 9999852110 0 01223334445678889999999999999999999999999998776
No 67
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=100.00 E-value=2.9e-32 Score=212.74 Aligned_cols=209 Identities=22% Similarity=0.249 Sum_probs=184.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+.++++.+++...+.++.++.+|+++++++.++++.+.++++++|+||||+|.....++.+.+.++|++.+++|+.
T Consensus 31 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (254)
T TIGR02415 31 DLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVK 110 (254)
T ss_pred eCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence 57778888888888877778999999999999999999999999999999999999877778889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.+.|++++. .++||++||..+..+.+.+..|+.+|++++.+++.++.|+. +.||+|+.++||+
T Consensus 111 ~~~~~~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg~ 182 (254)
T TIGR02415 111 GVLFGIQAAARQFKKQGH-------GGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELA-PKGITVNAYCPGI 182 (254)
T ss_pred HHHHHHHHHHHHHHhCCC-------CeEEEEecchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecCc
Confidence 999999999999988642 47999999999999999999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCC---------hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLA---------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++...... ..+....+....+.+++.+|+|+++++.||+++...+++|+.+..|
T Consensus 183 i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d 248 (254)
T TIGR02415 183 VKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVD 248 (254)
T ss_pred ccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEec
Confidence 99987433211 1122334455678889999999999999999999999999999876
No 68
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=100.00 E-value=8.9e-33 Score=216.04 Aligned_cols=208 Identities=18% Similarity=0.115 Sum_probs=172.6
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCc----cEEEeCCCCCCC--CCCCCC-CHHH
Q 027828 1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKL----DILVNAAAGNFL--VPAEDL-SPNG 71 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~l----d~li~~ag~~~~--~~~~~~-~~~~ 71 (218)
++|+.++++++.+++... +.++.++.+|+++.++++++++.+.+.++.+ |+||||||.... ..+.+. +.++
T Consensus 34 ~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~ 113 (256)
T TIGR01500 34 SARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQ 113 (256)
T ss_pred EEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHH
Confidence 368889999999998763 4578899999999999999999998887653 699999997543 223333 4789
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCC
Q 027828 72 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA 151 (218)
Q Consensus 72 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~g 151 (218)
|++.+++|+.+++.+++.++|.|++++.. .++||++||..+..+.+.+..|+++|+|+++|+++|+.|+. ++|
T Consensus 114 ~~~~~~vN~~~~~~~~~~~~~~l~~~~~~------~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~ 186 (256)
T TIGR01500 114 VQNYWALNLTSMLCLTSSVLKAFKDSPGL------NRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEK-NPN 186 (256)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHhhcCCC------CCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 99999999999999999999999865210 47899999999998999999999999999999999999998 899
Q ss_pred eEEeeeecCcccCCCccCCC---ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccc
Q 027828 152 IRVNGIAPGPIKDTAGVSKL---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLL 216 (218)
Q Consensus 152 i~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~ 216 (218)
|+||+|+||+++|++..... ..+...+.+....|++++.+|+|+|+.+++|++ .+.+++|+++-
T Consensus 187 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~-~~~~~~G~~~~ 253 (256)
T TIGR01500 187 VRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLE-KDKFKSGAHVD 253 (256)
T ss_pred eEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHh-cCCcCCcceee
Confidence 99999999999998754211 122344455667788999999999999999996 57899998764
No 69
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-33 Score=215.86 Aligned_cols=160 Identities=29% Similarity=0.386 Sum_probs=146.7
Q ss_pred CCCcHHHHHHHHHHHHhcC-CC-eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSLG-IP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~-~~-~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
+.|+..+++++.+++++.+ .+ +++++||++|.++++++++++..+||++|+||||||+.....+.+.+.+++..+|++
T Consensus 42 var~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdt 121 (282)
T KOG1205|consen 42 VARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDT 121 (282)
T ss_pred eehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhh
Confidence 4678889999999998864 34 899999999999999999999999999999999999988777888889999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCC--eEEee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYA--IRVNG 156 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~g--i~v~~ 156 (218)
|++|+.+++|+++|+|++++ .|+||+|||.+|..+.|..+.|++||+|+.+|+.+|+.|+. +++ |++ .
T Consensus 122 N~~G~V~~Tk~alp~m~~r~--------~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR~El~-~~~~~i~i-~ 191 (282)
T KOG1205|consen 122 NVFGTVYLTKAALPSMKKRN--------DGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELI-PLGTIIII-L 191 (282)
T ss_pred hchhhHHHHHHHHHHhhhcC--------CCeEEEEeccccccCCCcccccchHHHHHHHHHHHHHHHhh-ccCceEEE-E
Confidence 99999999999999999987 69999999999999999999999999999999999999998 776 666 9
Q ss_pred eecCcccCCCccCC
Q 027828 157 IAPGPIKDTAGVSK 170 (218)
Q Consensus 157 v~pG~v~t~~~~~~ 170 (218)
|.||+|+|++....
T Consensus 192 V~PG~V~Te~~~~~ 205 (282)
T KOG1205|consen 192 VSPGPIETEFTGKE 205 (282)
T ss_pred EecCceeecccchh
Confidence 99999999865543
No 70
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=100.00 E-value=3e-32 Score=213.09 Aligned_cols=206 Identities=28% Similarity=0.330 Sum_probs=178.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++ +.++.++.+|+++.++++.+++.+.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus 37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (257)
T PRK07067 37 DIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVK 113 (257)
T ss_pred cCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhh
Confidence 57787777776655 346888999999999999999999999999999999999877778888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.+.|.+++. .++||++||..+..+.+++..|+++|++++.+++.++.|+. ++||+|+.|+||+
T Consensus 114 ~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~ 185 (257)
T PRK07067 114 GLFFLMQAVARHMVEQGR-------GGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALI-RHGINVNAIAPGV 185 (257)
T ss_pred hHHHHHHHHHHHHHhcCC-------CcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhc-ccCeEEEEEeeCc
Confidence 999999999999987531 47999999998888889999999999999999999999998 8999999999999
Q ss_pred ccCCCccCC---------CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|+++... ..+.+....+....|++++.+|+|+|+++.||+++.+.+++|+++.+|
T Consensus 186 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~ 251 (257)
T PRK07067 186 VDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVD 251 (257)
T ss_pred ccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeec
Confidence 999864321 112233334455678899999999999999999999999999999876
No 71
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=100.00 E-value=5.2e-32 Score=210.38 Aligned_cols=206 Identities=22% Similarity=0.258 Sum_probs=180.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++.++..+++...+.++..+.||++|.+++.++++++.+.++++|+||||+|.....++.+.+.++|++.+++|+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 114 (246)
T PRK12938 35 GPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLT 114 (246)
T ss_pred CCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 34566666777777777778889999999999999999999999999999999999877677888999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.|.|.+++ .++||++||..+..+.+++..|+++|++++.++++++.|+. ++||++++|+||+
T Consensus 115 ~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~ 185 (246)
T PRK12938 115 SLFNVTKQVIDGMVERG--------WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVA-TKGVTVNTVSPGY 185 (246)
T ss_pred HHHHHHHHHHHHHHHcC--------CeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEecc
Confidence 99999999999998876 68999999999888888999999999999999999999998 8999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|+..... . +...+......+..++.+|+++++++.||+++...+++|+.+..|
T Consensus 186 ~~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~ 240 (246)
T PRK12938 186 IGTDMVKAI-R-PDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLN 240 (246)
T ss_pred cCCchhhhc-C-hHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEEC
Confidence 999865432 1 233344445567788899999999999999998999999998876
No 72
>PRK06841 short chain dehydrogenase; Provisional
Probab=100.00 E-value=4.5e-32 Score=211.78 Aligned_cols=204 Identities=36% Similarity=0.493 Sum_probs=175.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+. .+..+++. +.++.++.+|++++++++.+++++.+.++++|++|||+|.....++.+.+.++|++.+++|+.
T Consensus 46 ~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 122 (255)
T PRK06841 46 DRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLK 122 (255)
T ss_pred eCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcH
Confidence 465543 33333332 345778999999999999999999999999999999999877777888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.|.|++++ .++||++||..+..+.+.+..|+++|++++.++++++.|++ ++||+|++|+||+
T Consensus 123 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~pg~ 193 (255)
T PRK06841 123 GSFLMAQAVGRHMIAAG--------GGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWG-PYGITVNAISPTV 193 (255)
T ss_pred HHHHHHHHHHHHHHhcC--------CceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHH-hhCeEEEEEEeCc
Confidence 99999999999998876 68999999999988999999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++....+. ....+......|.+++.+|+|+++++++|+++.+.+++|+.|..|
T Consensus 194 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~d 249 (255)
T PRK06841 194 VLTELGKKAWA-GEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVID 249 (255)
T ss_pred CcCcccccccc-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence 99987554332 222334455678889999999999999999999999999999876
No 73
>PRK07576 short chain dehydrogenase; Provisional
Probab=100.00 E-value=5.2e-32 Score=212.65 Aligned_cols=207 Identities=40% Similarity=0.572 Sum_probs=178.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+.+++..+++...+.++.++.+|++++++++++++++.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus 40 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 119 (264)
T PRK07576 40 SRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLL 119 (264)
T ss_pred eCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhH
Confidence 68888888888888776677889999999999999999999999999999999999776677888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.|.|+++ .|+||++||..+..+.+.+..|+++|++++.|+++++.|+. ++||+|+.|+||+
T Consensus 120 g~~~l~~~~~~~l~~~---------~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~-~~gi~v~~v~pg~ 189 (264)
T PRK07576 120 GTFNVLKAAYPLLRRP---------GASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWG-PEGIRVNSIVPGP 189 (264)
T ss_pred HHHHHHHHHHHHHHhC---------CCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccc
Confidence 9999999999998764 48999999999888889999999999999999999999998 8899999999999
Q ss_pred ccC-CCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKD-TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.+ +...................|+++..+|+|+|+.+++|+++...+++|+.+..|
T Consensus 190 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~ 247 (264)
T PRK07576 190 IAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLPVD 247 (264)
T ss_pred ccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEEC
Confidence 974 322222222333333445567888999999999999999988889999998775
No 74
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=100.00 E-value=9.1e-32 Score=209.74 Aligned_cols=203 Identities=29% Similarity=0.352 Sum_probs=172.9
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCC-ccEEEeCCCCCC------CCCCCCCCHHHHHHH
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNF------LVPAEDLSPNGFRTV 75 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~-ld~li~~ag~~~------~~~~~~~~~~~~~~~ 75 (218)
|+.++++++.+++ +.++.++.+|++++++++++++++.+.+++ +|++|||+|... ..++.+.+.++|++.
T Consensus 38 ~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~ 114 (253)
T PRK08642 38 QSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQ 114 (253)
T ss_pred CCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHH
Confidence 3455555555544 356888999999999999999999999887 999999998631 245778899999999
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
+++|+.+++.+++++.|.|.+.+ .|+||++||..+..+.+++..|+++|+|++.+++.++.|+. ++||+||
T Consensus 115 ~~~n~~~~~~l~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i~v~ 185 (253)
T PRK08642 115 LEGSVKGALNTIQAALPGMREQG--------FGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELG-PYGITVN 185 (253)
T ss_pred HhhhhhHHHHHHHHHHHHHHhcC--------CeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHHHHhC-ccCeEEE
Confidence 99999999999999999998765 68999999988777777788999999999999999999998 9999999
Q ss_pred eeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|.||+++|+...... ++...+......|++++.+|+|+++++.||+++.+.+++|+.|.+|
T Consensus 186 ~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vd 247 (253)
T PRK08642 186 MVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVD 247 (253)
T ss_pred EEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeC
Confidence 9999999987544332 3344455666788899999999999999999999999999999877
No 75
>PLN02253 xanthoxin dehydrogenase
Probab=100.00 E-value=3.5e-32 Score=215.27 Aligned_cols=207 Identities=24% Similarity=0.254 Sum_probs=172.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n 79 (218)
+|+.+.++++.+++.. +.++.++++|++|.++++++++.+.+.++++|+||||||.... .++.+.+.++|+.++++|
T Consensus 49 ~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N 127 (280)
T PLN02253 49 DLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVN 127 (280)
T ss_pred eCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHh
Confidence 5667777777776633 4578899999999999999999999999999999999997643 467788999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++++++++.|.|.+++ .|+||+++|..+..+.+....|+++|+|++.+++.++.|+. ++||+|++++|
T Consensus 128 ~~g~~~~~~~~~~~~~~~~--------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~p 198 (280)
T PLN02253 128 VKGVFLGMKHAARIMIPLK--------KGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELG-KHGIRVNCVSP 198 (280)
T ss_pred hHHHHHHHHHHHHHHHhcC--------CceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEee
Confidence 9999999999999998765 68999999999888888888999999999999999999998 89999999999
Q ss_pred CcccCCCccCCCChH----HHHH----hhhhhcCC-CCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPE----EIRS----KATDYMAA-YKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~----~~~~----~~~~~~~~-~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.|++........ .... ......++ ++..+|+|+|+++.||+++.+.+++|+.|.+|
T Consensus 199 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vd 266 (280)
T PLN02253 199 YAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMID 266 (280)
T ss_pred CcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEEC
Confidence 999998643322111 1111 11112233 45679999999999999999999999998876
No 76
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=100.00 E-value=1.9e-32 Score=214.90 Aligned_cols=203 Identities=25% Similarity=0.301 Sum_probs=167.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCH----HHHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSP----NGFRTVI 76 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~----~~~~~~~ 76 (218)
+|+.++++++.+. .+.++.++.+|+++.+++.++++++.+.++++|++|||||.... .++.+.+. ++|++.+
T Consensus 36 ~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 112 (262)
T TIGR03325 36 DKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVF 112 (262)
T ss_pred eCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhh
Confidence 5777777665443 24578899999999999999999999999999999999997532 34444443 5799999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
++|+.+++.+++++.|.|.++ .|+||+++|..+..+.+....|+++|+|+++|++.++.|++ ++ |+||+
T Consensus 113 ~~N~~~~~~l~~~~~~~~~~~---------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~-irvn~ 181 (262)
T TIGR03325 113 HINVKGYLLAVKAALPALVAS---------RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELA-PY-VRVNG 181 (262)
T ss_pred eeecHhHHHHHHHHHHHHhhc---------CCCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHHHhhc-cC-eEEEE
Confidence 999999999999999999764 47899999999888888888999999999999999999998 76 99999
Q ss_pred eecCcccCCCccCCC---Ch-----HHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC-CCccccccccccC
Q 027828 157 IAPGPIKDTAGVSKL---AP-----EEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AAVHRDLIHLLDD 218 (218)
Q Consensus 157 v~pG~v~t~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~-~~~~~~g~~i~~d 218 (218)
|+||++.|++..... .. ....+......|++|+.+|+|+|++++||+++ .+.+++|+.|.+|
T Consensus 182 i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vd 252 (262)
T TIGR03325 182 VAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYD 252 (262)
T ss_pred EecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEec
Confidence 999999998754211 11 01223344567899999999999999999997 4678999999876
No 77
>PRK05872 short chain dehydrogenase; Provisional
Probab=100.00 E-value=6.8e-32 Score=215.23 Aligned_cols=202 Identities=18% Similarity=0.147 Sum_probs=174.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++.. +.++..+.||++|.++++++++++.++++++|++|||+|.....++.+.+.++|++++++|+
T Consensus 39 ~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~ 117 (296)
T PRK05872 39 VDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNL 117 (296)
T ss_pred EeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHh
Confidence 36888889888888753 45677788999999999999999999999999999999988778889999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.++++++++++|.|.+. .|+||++||..+..+.+.+..|+++|+++++|+++++.|+. ++||+|++++||
T Consensus 118 ~g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~-~~gi~v~~v~Pg 187 (296)
T PRK05872 118 LGVFHTVRATLPALIER---------RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVA-HHGVTVGSAYLS 187 (296)
T ss_pred HHHHHHHHHHHHHHHHc---------CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHCcEEEEEecC
Confidence 99999999999999874 48999999999999999999999999999999999999998 899999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhh--cCCCCCCCHHHHHHHHHHhccCCCcccccc
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDY--MAAYKFGEKWDIAMAALYLASDAAVHRDLI 213 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~ 213 (218)
+++|++.............+... .|.++..+|+|+++++.+++++...++++.
T Consensus 188 ~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~~~ 242 (296)
T PRK05872 188 WIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVYAP 242 (296)
T ss_pred cccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEEch
Confidence 99998765433221222223332 356788999999999999999888888765
No 78
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-31 Score=208.80 Aligned_cols=209 Identities=22% Similarity=0.235 Sum_probs=179.0
Q ss_pred CCcHHHHHHHHHHHHhc-C-CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~-~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+|+.++++++.+++... + .++.++.||+++.+++.++++++.+.++++|++|||+|.....++.+.+.++|++.+++|
T Consensus 33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n 112 (259)
T PRK12384 33 DINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVN 112 (259)
T ss_pred ECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhc
Confidence 67888888888877654 2 468899999999999999999999999999999999998877888899999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+.+++.+.|.+++. .++||++||..+..+.+....|+++|+|+++++++++.|++ ++||+|++|+|
T Consensus 113 ~~~~~~l~~~~~~~l~~~~~-------~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~-~~gi~v~~v~p 184 (259)
T PRK12384 113 LVGYFLCAREFSRLMIRDGI-------QGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLA-EYGITVHSLML 184 (259)
T ss_pred cHHHHHHHHHHHHHHHhCCC-------CcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCcEEEEEec
Confidence 99999999999999987641 37999999998888888888999999999999999999998 89999999999
Q ss_pred Ccc-cCCCccCCC---------ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPI-KDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v-~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|.+ .+++..... ..++..+.+....+++++.+|+|++++++||+++...+++|+.+..|
T Consensus 185 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~ 253 (259)
T PRK12384 185 GNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVT 253 (259)
T ss_pred CCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEc
Confidence 976 444332111 12344444556788899999999999999999988889999988776
No 79
>PRK07890 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-31 Score=209.12 Aligned_cols=207 Identities=27% Similarity=0.307 Sum_probs=180.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.++++++.+++...+.++.++.+|+++.++++.+++++.++++++|++|||+|...+ .++.+.+.++|++.+++|+
T Consensus 36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~ 115 (258)
T PRK07890 36 ARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNV 115 (258)
T ss_pred eCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhh
Confidence 688888888888888777789999999999999999999999999999999999997544 6777888999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.+.|.+. .++||++||..+..+.+++..|+++|++++.++++++.|++ ++||++++++||
T Consensus 116 ~~~~~l~~~~~~~~~~~---------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~-~~~i~v~~v~pg 185 (258)
T PRK07890 116 LGTLRLTQAFTPALAES---------GGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELG-PQGIRVNSVAPG 185 (258)
T ss_pred HHHHHHHHHHHHHHHhC---------CCEEEEEechhhccCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEeCC
Confidence 99999999999998765 47999999999988889999999999999999999999998 889999999999
Q ss_pred cccCCCccCC---------CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSK---------LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+.|+..... ...+..........+.+++.+|+|+++++.||+++...+++|++|.+|
T Consensus 186 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~ 252 (258)
T PRK07890 186 YIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVN 252 (258)
T ss_pred ccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeC
Confidence 9998864321 122334444555678888999999999999999988889999998775
No 80
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=100.00 E-value=4.8e-32 Score=212.97 Aligned_cols=189 Identities=28% Similarity=0.329 Sum_probs=162.3
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC---------CCCCCCHHHHHHHHhhhhhhHHHHHHHHH
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---------PAEDLSPNGFRTVIEIDSVGTFIMCHEAL 91 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 91 (218)
++.++.+|++++++++++++.+.+.++++|++|||||...+. ++.+.+.++|++++++|+.+++.+++++.
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 129 (266)
T PRK06171 50 NYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVA 129 (266)
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHH
Confidence 456788999999999999999999999999999999975432 23467899999999999999999999999
Q ss_pred HHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc-CCCccCC
Q 027828 92 KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSK 170 (218)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~-t~~~~~~ 170 (218)
++|.+++ .++||++||..+..+.+.+..|+++|++++++++.++.|+. ++||+||+|+||++. |++....
T Consensus 130 ~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~-~~gi~v~~v~pG~~~~t~~~~~~ 200 (266)
T PRK06171 130 RQMVKQH--------DGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELG-KHNIRVVGVAPGILEATGLRTPE 200 (266)
T ss_pred HHHHhcC--------CcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeccccccCCCcChh
Confidence 9998876 68999999999988888999999999999999999999998 999999999999997 4432211
Q ss_pred C----------ChHHHHHhhhh--hcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 171 L----------APEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 171 ~----------~~~~~~~~~~~--~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
. ......+.+.. ..|++|+.+|+|+|+++.||+|+.+.+++|++|.+|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vd 260 (266)
T PRK06171 201 YEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIA 260 (266)
T ss_pred hhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEec
Confidence 0 11233333444 678999999999999999999999999999999887
No 81
>PRK12939 short chain dehydrogenase; Provisional
Probab=100.00 E-value=5.6e-31 Score=204.89 Aligned_cols=207 Identities=29% Similarity=0.276 Sum_probs=184.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+++++..++++..+.++.++.+|+++.++++++++++.+.++++|++|||+|.....++.+.+.++++..++.|+.
T Consensus 38 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (250)
T PRK12939 38 DGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVR 117 (250)
T ss_pred eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 57888888888888777778999999999999999999999999999999999999887777888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.+.|.+.+++ .|+||++||..+..+.+....|+++|++++.+++.++.++. +++|+++.|+||+
T Consensus 118 ~~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg~ 188 (250)
T PRK12939 118 GTFLMLRAALPHLRDSG--------RGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELG-GRGITVNAIAPGL 188 (250)
T ss_pred HHHHHHHHHHHHHHHcC--------CeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHHHh-hhCEEEEEEEECC
Confidence 99999999999998876 68999999999988888899999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++...... ..+...+....+..++.+|+|+++++++++++..++++|+.|..|
T Consensus 189 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~ 244 (250)
T PRK12939 189 TATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVN 244 (250)
T ss_pred CCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 99887544322 234444555677888999999999999999988889999999876
No 82
>PRK07814 short chain dehydrogenase; Provisional
Probab=100.00 E-value=6.4e-31 Score=206.34 Aligned_cols=209 Identities=28% Similarity=0.328 Sum_probs=181.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+.+...+.++.++.+|+++++++.++++++.+.++++|+||||||.....++.+.+.++++..+++|+
T Consensus 40 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~ 119 (263)
T PRK07814 40 AARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNV 119 (263)
T ss_pred EeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhc
Confidence 36888888888888877677889999999999999999999999999999999999987777788899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.++|.+... .++||++||..+..+.+++..|+++|++++.++++++.|+. + +|++++|+||
T Consensus 120 ~~~~~l~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~-~-~i~v~~i~Pg 190 (263)
T PRK07814 120 ATAHALTVAAVPLMLEHSG-------GGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLC-P-RIRVNAIAPG 190 (263)
T ss_pred HHHHHHHHHHHHHHHhhcC-------CeEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHHC-C-CceEEEEEeC
Confidence 9999999999999987421 68999999999988889999999999999999999999997 6 6999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.|++..................+..+..+|+|+|+.++||+++...+++|..+..|
T Consensus 191 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 248 (263)
T PRK07814 191 SILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVD 248 (263)
T ss_pred CCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEEC
Confidence 9998865432223344445555667778889999999999999988889999887654
No 83
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=100.00 E-value=4.9e-31 Score=205.26 Aligned_cols=208 Identities=23% Similarity=0.288 Sum_probs=185.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++.+++.+++...+.++.++.+|+++.++++++++.+.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus 34 ~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (250)
T TIGR03206 34 DLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLT 113 (250)
T ss_pred cCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 67888888888888777778999999999999999999999999999999999999877677888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+.+++.+.|++++ .++||++||..+..+.+....|+.+|+|++.++++++.++. +.||+++.++||+
T Consensus 114 ~~~~l~~~~~~~~~~~~--------~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~~i~v~~v~pg~ 184 (250)
T TIGR03206 114 GALHMHHAVLPGMVERG--------AGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHA-RHGITVNVVCPGP 184 (250)
T ss_pred HHHHHHHHHHHHHHhcC--------CeEEEEECchhhccCCCCCchHHHHHHHHHHHHHHHHHHHh-HhCcEEEEEecCc
Confidence 99999999999998876 68999999999998889999999999999999999999998 8899999999999
Q ss_pred ccCCCccCC----CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSK----LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++.... ..+......+....|.++..+|+|+|+++.+|++++..+++|+++..|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 245 (250)
T TIGR03206 185 TDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVS 245 (250)
T ss_pred ccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeC
Confidence 998864432 223344556667778888999999999999999999999999998765
No 84
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-31 Score=205.44 Aligned_cols=183 Identities=18% Similarity=0.150 Sum_probs=160.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+.|.+..++..+++++.| +++.+.||+|+.+++.+..++++++.|.+|+||||||+....++.+.+.+++++.+++|+.
T Consensus 69 Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~ 147 (300)
T KOG1201|consen 69 DINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI 147 (300)
T ss_pred eccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhH
Confidence 456777888899998875 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhc--CCCCeEEeeeec
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAP 159 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~--~~~gi~v~~v~p 159 (218)
+.++.+++|+|.|.+.. +|+||+|+|.+|..+.++-..|++||+|+.+|.++|..|+. ...||+...|+|
T Consensus 148 ~~f~t~kaFLP~M~~~~--------~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P 219 (300)
T KOG1201|consen 148 AHFWTTKAFLPKMLENN--------NGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCP 219 (300)
T ss_pred HHHHHHHHHhHHHHhcC--------CceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEee
Confidence 99999999999999987 89999999999999999999999999999999999999986 356799999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhc
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLA 203 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~ 203 (218)
+++.|++.......+.+ ....+|+.+|+.++.-+
T Consensus 220 ~~i~Tgmf~~~~~~~~l----------~P~L~p~~va~~Iv~ai 253 (300)
T KOG1201|consen 220 YFINTGMFDGATPFPTL----------APLLEPEYVAKRIVEAI 253 (300)
T ss_pred eeccccccCCCCCCccc----------cCCCCHHHHHHHHHHHH
Confidence 99999876652211111 12457778887777543
No 85
>PRK12937 short chain dehydrogenase; Provisional
Probab=100.00 E-value=6.1e-31 Score=204.13 Aligned_cols=203 Identities=26% Similarity=0.313 Sum_probs=179.2
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
+.+.++++.+++...+.++.++.+|+++.++++++++++.++++++|++|||+|.....++.+.+.++|++++++|+.++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 118 (245)
T PRK12937 39 SAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGA 118 (245)
T ss_pred CHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHH
Confidence 45557778888877777899999999999999999999999999999999999987777788889999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
+.++++++|.|.+ .++||++||..+..+.+.+..|+.+|++++.++++++.|+. +.||+++.++||++.
T Consensus 119 ~~~~~~~~~~~~~----------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~-~~~i~v~~i~pg~~~ 187 (245)
T PRK12937 119 FVVLREAARHLGQ----------GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELR-GRGITVNAVAPGPVA 187 (245)
T ss_pred HHHHHHHHHHhcc----------CcEEEEEeeccccCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEEeCCcc
Confidence 9999999998864 47899999999888899999999999999999999999998 889999999999999
Q ss_pred CCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++...... +.....+....|.++..+|+|+++.+.||+++...+++|..+..|
T Consensus 188 t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 241 (245)
T PRK12937 188 TELFFNGKS-AEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVN 241 (245)
T ss_pred CchhcccCC-HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeC
Confidence 987543332 233445666778888999999999999999988889999998776
No 86
>PRK07069 short chain dehydrogenase; Validated
Probab=100.00 E-value=4.4e-31 Score=205.65 Aligned_cols=208 Identities=28% Similarity=0.318 Sum_probs=178.7
Q ss_pred CCc-HHHHHHHHHHHHhcC--CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 2 GRR-KTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 2 ~R~-~~~l~~~~~~l~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
+|+ .++++++.+++.... ..+..+.+|+++.++++++++++.+.++++|++|||+|.....++.+.+.+++++++++
T Consensus 30 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 109 (251)
T PRK07069 30 DINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAI 109 (251)
T ss_pred eCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 465 667788887776542 23456899999999999999999999999999999999887778888999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCC--CeEEee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY--AIRVNG 156 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~--gi~v~~ 156 (218)
|+.+++.+++.++|.|.+++ .++||++||..+..+.+.+..|+++|++++.++++++.|+. ++ +|+|+.
T Consensus 110 n~~~~~~~~~~~~~~~~~~~--------~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~~~i~v~~ 180 (251)
T PRK07069 110 NVESIFLGCKHALPYLRASQ--------PASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCA-RRGLDVRCNS 180 (251)
T ss_pred hhHHHHHHHHHHHHHHhhcC--------CcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHHHHHhc-ccCCcEEEEE
Confidence 99999999999999998876 68999999999998889999999999999999999999997 55 499999
Q ss_pred eecCcccCCCccCC---CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 157 IAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 157 v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+||+++|++.... ...+..........+.+++.+|+|+++++++|+++...+++|+.|..|
T Consensus 181 v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~ 245 (251)
T PRK07069 181 IHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVID 245 (251)
T ss_pred EeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEEC
Confidence 99999999875432 122333444555677888899999999999999999999999998876
No 87
>PRK06500 short chain dehydrogenase; Provisional
Probab=100.00 E-value=4.8e-31 Score=205.22 Aligned_cols=203 Identities=24% Similarity=0.283 Sum_probs=174.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+.++++.+++ +.++.++++|+++.+++..+++.+.+.++++|++|||+|.....++.+.+.++|+..+++|+.
T Consensus 37 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (249)
T PRK06500 37 GRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVK 113 (249)
T ss_pred cCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 57777666665554 567889999999999999999999999999999999999877677788899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.|.|.+ .+++|+++|..+..+.+....|+.+|+++++++++++.|+. ++||+++.|+||.
T Consensus 114 ~~~~l~~~~~~~~~~----------~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~pg~ 182 (249)
T PRK06500 114 GPYFLIQALLPLLAN----------PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELL-PRGIRVNAVSPGP 182 (249)
T ss_pred HHHHHHHHHHHHHhc----------CCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCc
Confidence 999999999998854 47799999988888888999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCC----ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++..... ....+........|..++.+|+|+|+++.||+++...+++|..|.+|
T Consensus 183 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~ 243 (249)
T PRK06500 183 VQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVD 243 (249)
T ss_pred CCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEEC
Confidence 9998654211 11233334455667888899999999999999988899999999876
No 88
>PRK06483 dihydromonapterin reductase; Provisional
Probab=100.00 E-value=4.1e-31 Score=204.23 Aligned_cols=183 Identities=19% Similarity=0.176 Sum_probs=158.3
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCC
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ 101 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 101 (218)
+.++.+|+++.++++.+++.+.+.++++|++|||+|......+.+.+.++|++++++|+.+++.+++.+.|.|.+.+.+
T Consensus 48 ~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~- 126 (236)
T PRK06483 48 AQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHA- 126 (236)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCC-
Confidence 6778999999999999999999999999999999997655556677899999999999999999999999999875310
Q ss_pred CCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHhhh
Q 027828 102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181 (218)
Q Consensus 102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~ 181 (218)
.++||++||..+..+.+.+..|+++|+++++|+++++.|++ + +||||+|+||++.|+.. .++...+...
T Consensus 127 -----~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~-~-~irvn~v~Pg~~~~~~~----~~~~~~~~~~ 195 (236)
T PRK06483 127 -----ASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLA-P-EVKVNSIAPALILFNEG----DDAAYRQKAL 195 (236)
T ss_pred -----CceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHC-C-CcEEEEEccCceecCCC----CCHHHHHHHh
Confidence 37899999999888888899999999999999999999998 7 59999999999976532 1233334445
Q ss_pred hhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 182 DYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 182 ~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
...++++..+|+|+++++.||++ +.+++|++|.+|
T Consensus 196 ~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~vd 230 (236)
T PRK06483 196 AKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLPVD 230 (236)
T ss_pred ccCccccCCCHHHHHHHHHHHhc--CCCcCCcEEEeC
Confidence 56788889999999999999997 679999999877
No 89
>PRK08862 short chain dehydrogenase; Provisional
Probab=100.00 E-value=3.2e-31 Score=203.57 Aligned_cols=188 Identities=15% Similarity=0.165 Sum_probs=160.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhC-CccEEEeCCCCC-CCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG-KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-~ld~li~~ag~~-~~~~~~~~~~~~~~~~~~~ 78 (218)
++|+.++++++.+++.+.+.++..+.+|++++++++++++.+.++++ ++|++|||+|.. ...++.+.+.++|.+.+++
T Consensus 35 ~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~ 114 (227)
T PRK08862 35 CDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSS 114 (227)
T ss_pred EcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHH
Confidence 47899999999999988777888999999999999999999999999 999999999854 3467888999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.+++.++|+|++++. +|+||++||..+ .+++..|+++|+|+.+|+++|+.|+. ++||+||+|+
T Consensus 115 ~~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~---~~~~~~Y~asKaal~~~~~~la~el~-~~~Irvn~v~ 183 (227)
T PRK08862 115 LASTLFTYGQVAAERMRKRNK-------KGVIVNVISHDD---HQDLTGVESSNALVSGFTHSWAKELT-PFNIRVGGVV 183 (227)
T ss_pred hhHHHHHHHHHHHHHHHhcCC-------CceEEEEecCCC---CCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEe
Confidence 999999999999999987532 589999999754 35678899999999999999999998 9999999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccc
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLL 216 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~ 216 (218)
||++.|+... .+..|.+ .. +|++.+..||++ +.|++|..|+
T Consensus 184 PG~i~t~~~~---~~~~~~~-~~-----------~~~~~~~~~l~~--~~~~tg~~~~ 224 (227)
T PRK08862 184 PSIFSANGEL---DAVHWAE-IQ-----------DELIRNTEYIVA--NEYFSGRVVE 224 (227)
T ss_pred cCcCcCCCcc---CHHHHHH-HH-----------HHHHhheeEEEe--cccccceEEe
Confidence 9999987311 1121211 11 799999999997 6799998775
No 90
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=100.00 E-value=7.1e-31 Score=205.26 Aligned_cols=194 Identities=22% Similarity=0.271 Sum_probs=170.8
Q ss_pred HHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHH
Q 027828 11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 90 (218)
Q Consensus 11 ~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 90 (218)
+.+++...+.++.++.+|+++.+++..+++++.+.++++|+||||+|.....++.+.+.+++++.+++|+.+++.+.+++
T Consensus 58 ~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 137 (256)
T PRK12748 58 LKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAF 137 (256)
T ss_pred HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 55666666778999999999999999999999999999999999999877778888999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCC
Q 027828 91 LKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK 170 (218)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~ 170 (218)
.+.|.++. .++||++||..+..+.++...|+++|+|+++++++++.|+. ++||+|+.|+||+++|+....
T Consensus 138 ~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~Pg~~~t~~~~~- 207 (256)
T PRK12748 138 AKQYDGKA--------GGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELA-EKGITVNAVNPGPTDTGWITE- 207 (256)
T ss_pred HHHhhhcC--------CeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEeCcccCCCCCh-
Confidence 99997765 68999999999888888899999999999999999999998 889999999999999875332
Q ss_pred CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 171 LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
..........+..++.+|+|+++.+.||+++.+.+++|..+..|
T Consensus 208 ----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d 251 (256)
T PRK12748 208 ----ELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSE 251 (256)
T ss_pred ----hHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEec
Confidence 22233344556677889999999999999999999999998876
No 91
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-30 Score=203.23 Aligned_cols=210 Identities=26% Similarity=0.354 Sum_probs=176.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~ 80 (218)
.|+.++++++.+++...+.++.++.||+++.++++++++++.+.++++|++|||+|.... .++.+.+.++|+..+++|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~ 113 (248)
T PRK06947 34 ARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNV 113 (248)
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhcc
Confidence 467778888888887767789999999999999999999999999999999999997644 4677889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcc-hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
.+++.+++++++.+..++.+. .++||++||..+..+.+. +..|+++|++++++++.++.++. +.||+|+.|+|
T Consensus 114 ~~~~~l~~~~~~~~~~~~~~~-----~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~-~~~i~v~~i~P 187 (248)
T PRK06947 114 LGAYLCAREAARRLSTDRGGR-----GGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELG-PHGVRVNAVRP 187 (248)
T ss_pred HHHHHHHHHHHHHHHhcCCCC-----CcEEEEECchhhcCCCCCCCcccHhhHHHHHHHHHHHHHHhh-hhCcEEEEEec
Confidence 999999999999987653111 478999999988777664 56899999999999999999998 88999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+++|++......+ ..........|..+..+|+++++.++||+++.+.+++|..|..|
T Consensus 188 g~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~ 245 (248)
T PRK06947 188 GLIETEIHASGGQP-GRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVG 245 (248)
T ss_pred cCcccccccccCCH-HHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeC
Confidence 99999875432222 22233344567778899999999999999999999999998766
No 92
>PRK06701 short chain dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-30 Score=207.73 Aligned_cols=205 Identities=29% Similarity=0.314 Sum_probs=176.5
Q ss_pred CCcH-HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhh
Q 027828 2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~-~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n 79 (218)
+|+. +.+++..+.+...+.++.++.+|+++.+++.++++++.+.++++|+||||||.... .++.+.+.++|...+++|
T Consensus 77 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N 156 (290)
T PRK06701 77 YLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTN 156 (290)
T ss_pred eCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhh
Confidence 3443 34666667776667788999999999999999999999999999999999997543 567888999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+++++.+.|++ .++||++||..+..+.+....|+++|+|++.++++++.++. ++||+|++|+|
T Consensus 157 ~~~~~~l~~a~~~~~~~----------~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~gIrv~~i~p 225 (290)
T PRK06701 157 IYSYFHMTKAALPHLKQ----------GSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLV-QKGIRVNAVAP 225 (290)
T ss_pred hHHHHHHHHHHHHHHhh----------CCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEec
Confidence 99999999999998864 47899999999988888889999999999999999999998 89999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+++|++...... +...+.+....+++++.+|+|+|++++||+++.+.+++|..+.+|
T Consensus 226 G~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~id 283 (290)
T PRK06701 226 GPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVN 283 (290)
T ss_pred CCCCCcccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeC
Confidence 9999987544332 233344455678888999999999999999999999999998876
No 93
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-30 Score=203.68 Aligned_cols=207 Identities=34% Similarity=0.450 Sum_probs=179.1
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++.+.+++...+.++.++.||++|+++++++++.+.+.++++|++|||+|.....++.+.+.+.|++.+++|+
T Consensus 42 ~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 121 (259)
T PRK08213 42 SARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNV 121 (259)
T ss_pred EeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHh
Confidence 36888888888888887777888999999999999999999999999999999999987667778889999999999999
Q ss_pred hhHHHHHHHHHHH-HHhcCCCCCCCCCCceEEEecccccccCCcc----hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 81 VGTFIMCHEALKY-LKKGGRGQASSSSGGIIINISATLHYTATWY----QIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~----~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
.+++.+++++.+. |.+++ .++||++||..+..+.+. ...|+++|++++.+++.++.++. ++||+++
T Consensus 122 ~~~~~l~~~~~~~~l~~~~--------~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~-~~gi~v~ 192 (259)
T PRK08213 122 RGLFLLSQAVAKRSMIPRG--------YGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWG-PHGIRVN 192 (259)
T ss_pred HHHHHHHHHHHHHHHHhcC--------CeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhc-ccCEEEE
Confidence 9999999999998 66654 689999999877665543 48899999999999999999998 8999999
Q ss_pred eeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.++||++.|++..... +.+.+......|..++++|+|++..+.+|+++.+.+++|.++..|
T Consensus 193 ~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~ 253 (259)
T PRK08213 193 AIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQILAVD 253 (259)
T ss_pred EEecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEEC
Confidence 9999999987643322 233344556677888899999999999999999999999999876
No 94
>PRK05717 oxidoreductase; Validated
Probab=99.98 E-value=1.7e-30 Score=203.08 Aligned_cols=202 Identities=24% Similarity=0.274 Sum_probs=170.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n 79 (218)
+|+.++++++.+++ +.++.++.+|+++.+++..+++++.++++++|++|||+|.... .++.+.+.++|+..+++|
T Consensus 41 ~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n 117 (255)
T PRK05717 41 DLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVN 117 (255)
T ss_pred cCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHh
Confidence 46666666555443 4578899999999999999999999999999999999997643 567788999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+++++.|.|.+. .|+||++||..+..+.+.+..|+++|+|++.+++.++.++. + +|+|++|+|
T Consensus 118 ~~~~~~l~~~~~~~~~~~---------~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~-~i~v~~i~P 186 (255)
T PRK05717 118 LTGPMLLAKHCAPYLRAH---------NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLG-P-EIRVNAVSP 186 (255)
T ss_pred hHHHHHHHHHHHHHHHHc---------CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-C-CCEEEEEec
Confidence 999999999999999765 48899999999988888999999999999999999999987 6 599999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.|++..... ...+........+.++..+|+|++.++.||+++...+++|+.+..|
T Consensus 187 g~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 244 (255)
T PRK05717 187 GWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVD 244 (255)
T ss_pred ccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEEC
Confidence 999998643322 1222233334567889999999999999999988889999888765
No 95
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.98 E-value=3e-30 Score=200.68 Aligned_cols=209 Identities=26% Similarity=0.319 Sum_probs=176.6
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhhh
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~ 81 (218)
|+.++++++.+++...+.++.++.||+++.+++.++++.+.++++++|+||||+|...+ .++.+.+.++|+..+++|+.
T Consensus 35 ~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~ 114 (248)
T PRK06123 35 RNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVV 114 (248)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 55667777777787767788899999999999999999999999999999999998654 46778899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcc-hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
+++.+++++++.|.++..+. .|+||++||..+..+.+. +..|+++|++++.+++.++.|+. ++||+|+.|+||
T Consensus 115 ~~~~l~~~~~~~~~~~~~~~-----~g~iv~~sS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~~~i~v~~i~pg 188 (248)
T PRK06123 115 GSFLCAREAVKRMSTRHGGR-----GGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVA-AEGIRVNAVRPG 188 (248)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----CeEEEEECchhhcCCCCCCccchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence 99999999999997653111 478999999988877775 46799999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+.|++...... +..........|+++..+|+|++++++||+++...+++|..+..|
T Consensus 189 ~v~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 245 (248)
T PRK06123 189 VIYTEIHASGGE-PGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVS 245 (248)
T ss_pred cccCchhhccCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEeec
Confidence 999986543322 233344556678888899999999999999988889999887654
No 96
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.98 E-value=1.4e-30 Score=210.12 Aligned_cols=191 Identities=20% Similarity=0.232 Sum_probs=166.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++++.+.++.++.+|++|.++++++++.+.+.++++|++|||||+....++.+.+.++|++.+++|+
T Consensus 37 ~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~ 116 (330)
T PRK06139 37 AARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNL 116 (330)
T ss_pred EECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhh
Confidence 36899999999999988888899999999999999999999999999999999999988888899999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCC-CeEEeeeec
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY-AIRVNGIAP 159 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~-gi~v~~v~p 159 (218)
.++++++++++|+|++++ .|+||+++|..+..+.|.+..|+++|+|+.+|+++|+.|+. +. ||+|++|+|
T Consensus 117 ~g~~~~~~~~lp~~~~~~--------~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~El~-~~~gI~V~~v~P 187 (330)
T PRK06139 117 IGYMRDAHAALPIFKKQG--------HGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELA-DHPDIHVCDVYP 187 (330)
T ss_pred HHHHHHHHHHHHHHHHcC--------CCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEec
Confidence 999999999999999876 68999999999999999999999999999999999999998 64 999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
|+++|++........ . ....+.....+|+++|+++++++..
T Consensus 188 g~v~T~~~~~~~~~~--~---~~~~~~~~~~~pe~vA~~il~~~~~ 228 (330)
T PRK06139 188 AFMDTPGFRHGANYT--G---RRLTPPPPVYDPRRVAKAVVRLADR 228 (330)
T ss_pred CCccCcccccccccc--c---ccccCCCCCCCHHHHHHHHHHHHhC
Confidence 999998654321100 0 0111223356999999999999854
No 97
>PRK06484 short chain dehydrogenase; Validated
Probab=99.98 E-value=7.4e-31 Score=224.28 Aligned_cols=205 Identities=29% Similarity=0.350 Sum_probs=175.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~--~~~~~~~~~~~~~~~~~~n 79 (218)
+|+.++++++.+++ +.++.++.+|++++++++++++.+.++++++|+||||||... ..++.+.+.++|++++++|
T Consensus 36 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n 112 (520)
T PRK06484 36 DRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAIN 112 (520)
T ss_pred eCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHh
Confidence 68888887776665 557888999999999999999999999999999999999743 3567889999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCc-eEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGG-IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
+.+++.++++++|+|++++ .| +||++||..+..+.+.+..|+++|+|+.+|++.++.|+. ++||+|++|+
T Consensus 113 ~~~~~~l~~~~~~~~~~~~--------~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~~i~v~~i~ 183 (520)
T PRK06484 113 LTGAYLVAREALRLMIEQG--------HGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWA-AKGIRVNAVL 183 (520)
T ss_pred hHHHHHHHHHHHHHHHhcC--------CCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEc
Confidence 9999999999999998765 44 999999999999999999999999999999999999998 8999999999
Q ss_pred cCcccCCCccCCCChHH-HHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||++.|++......... .........+.+++.+|+++++.+.||+++...+++|..+..|
T Consensus 184 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~ 244 (520)
T PRK06484 184 PGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVD 244 (520)
T ss_pred cCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEec
Confidence 99999987543221111 1223344567778889999999999999999999999988765
No 98
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.98 E-value=8.7e-31 Score=204.87 Aligned_cols=204 Identities=21% Similarity=0.295 Sum_probs=165.5
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
++.+.++++.+++...+.++.++++|++++++++++++++.+.++++|++|||||.....++.+.+.++|++.+++|+.+
T Consensus 44 ~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~ 123 (257)
T PRK12744 44 ASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKS 123 (257)
T ss_pred cchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhH
Confidence 34566777777777667788999999999999999999999999999999999998777788889999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.+++++.|.|.+ .+++++++|.......+.+..|+++|+|++.|+++++.|+. ++||+|++++||++
T Consensus 124 ~~~~~~~~~~~~~~----------~~~iv~~~ss~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~pg~v 192 (257)
T PRK12744 124 AFFFIKEAGRHLND----------NGKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEFG-ARGISVTAVGPGPM 192 (257)
T ss_pred HHHHHHHHHHhhcc----------CCCEEEEecchhcccCCCcccchhhHHHHHHHHHHHHHHhC-cCceEEEEEecCcc
Confidence 99999999998865 46677764433334567788999999999999999999998 89999999999999
Q ss_pred cCCCccCCCChHH--HHHhhhhhcCCC--CCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEE--IRSKATDYMAAY--KFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.|++......... .........++. ++.+|+|++.++.||+++ +.+++|+++.+|
T Consensus 193 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~g~~~~~~ 251 (257)
T PRK12744 193 DTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-GWWITGQTILIN 251 (257)
T ss_pred ccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-cceeecceEeec
Confidence 9886543222211 111111222333 678999999999999995 679999998876
No 99
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.98 E-value=1.3e-30 Score=205.65 Aligned_cols=192 Identities=27% Similarity=0.287 Sum_probs=166.5
Q ss_pred HHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHH
Q 027828 7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 86 (218)
.++++.+++...+.++.++.+|+++.+++.++++++.+.++++|+||||+|.....++.+.+.++|++.+++|+.+++.+
T Consensus 49 ~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l 128 (273)
T PRK08278 49 TIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLV 128 (273)
T ss_pred HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHH
Confidence 35667777877778899999999999999999999999999999999999987777888899999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC--cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC-ccc
Q 027828 87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT--WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG-PIK 163 (218)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG-~v~ 163 (218)
++++.|.|++++ .|+||++||..+..+. +++..|+++|+|++.++++++.|+. ++||+||+|+|| ++.
T Consensus 129 ~~~~~~~~~~~~--------~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~-~~~I~v~~i~Pg~~i~ 199 (273)
T PRK08278 129 SQACLPHLKKSE--------NPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFR-DDGIAVNALWPRTTIA 199 (273)
T ss_pred HHHHHHHHHhcC--------CCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhh-hcCcEEEEEeCCCccc
Confidence 999999998876 6899999998877776 7889999999999999999999999 899999999999 577
Q ss_pred CCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccc
Q 027828 164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLL 216 (218)
Q Consensus 164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~ 216 (218)
|+....... ...+..+..+|+++|+.+++|+++...+++|+.+.
T Consensus 200 t~~~~~~~~---------~~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~ 243 (273)
T PRK08278 200 TAAVRNLLG---------GDEAMRRSRTPEIMADAAYEILSRPAREFTGNFLI 243 (273)
T ss_pred cHHHHhccc---------ccccccccCCHHHHHHHHHHHhcCccccceeEEEe
Confidence 753222111 11234567899999999999999988899998774
No 100
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.98 E-value=1.5e-30 Score=203.87 Aligned_cols=189 Identities=21% Similarity=0.240 Sum_probs=162.0
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
++.+++||+++.++++++++++.+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++
T Consensus 50 ~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 129 (260)
T PRK06523 50 GVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG 129 (260)
T ss_pred ceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC
Confidence 5678999999999999999999999999999999999653 35677889999999999999999999999999999876
Q ss_pred CCCCCCCCCceEEEecccccccCCc-chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCC------
Q 027828 99 RGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL------ 171 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~------ 171 (218)
.|+||++||..+..+.+ ....|+++|++++.+++.++.|+. ++||++++|+||+++|++.....
T Consensus 130 --------~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~ 200 (260)
T PRK06523 130 --------SGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVA-PKGVRVNTVSPGWIETEAAVALAERLAEA 200 (260)
T ss_pred --------CcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHh-hcCcEEEEEecCcccCccHHHHHHHHHhh
Confidence 68999999999887755 788999999999999999999998 89999999999999998643210
Q ss_pred ---ChHHHHHh---hhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 172 ---APEEIRSK---ATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 172 ---~~~~~~~~---~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
..++..+. .....|.+++.+|+|+|+++.||+++.+.+++|+.+..|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vd 253 (260)
T PRK06523 201 AGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVID 253 (260)
T ss_pred cCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEec
Confidence 11111111 123468888999999999999999999999999998876
No 101
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.98 E-value=1.5e-30 Score=203.64 Aligned_cols=205 Identities=26% Similarity=0.256 Sum_probs=171.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+++ ++.+++.+.+.++.++.+|+++.++++++++++.+.++++|++|||+|......+.... ++|+..+++|+.
T Consensus 38 ~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~ 115 (258)
T PRK08628 38 GRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGR-EAFVASLERNLI 115 (258)
T ss_pred cCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCCCcccCCH-HHHHHHHhhhhH
Confidence 5777766 77777877777899999999999999999999999999999999999976555555544 899999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.+.|.+++. .++||++||..+..+.+.+..|+++|++++.+++.++.|+. ++||+|+.|+||.
T Consensus 116 ~~~~~~~~~~~~~~~~---------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~pg~ 185 (258)
T PRK08628 116 HYYVMAHYCLPHLKAS---------RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALA-KDGVRVNAVIPAE 185 (258)
T ss_pred HHHHHHHHHHHHhhcc---------CcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecCc
Confidence 9999999999988754 58999999999998888999999999999999999999998 8999999999999
Q ss_pred ccCCCccCC----CChHHHHHhhhhhcCCC-CCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSK----LAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++.... ..............+.+ ++.+|+|+|++++||+++.+.+++|+.+..|
T Consensus 186 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 247 (258)
T PRK08628 186 VMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVD 247 (258)
T ss_pred cCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCceEEec
Confidence 999864321 11122222233344553 7889999999999999998899999888765
No 102
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.98 E-value=1.5e-30 Score=202.86 Aligned_cols=191 Identities=23% Similarity=0.314 Sum_probs=167.6
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
+.++.++++|+++.++++++++++.+.++++|++|||+|.....++.+.+.+++++.+++|+.+++.+++++.+.|++++
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 126 (252)
T PRK08220 47 DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR 126 (252)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 44677899999999999999999999999999999999987777888889999999999999999999999999998876
Q ss_pred CCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChH----
Q 027828 99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE---- 174 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~---- 174 (218)
.++||++||..+..+.+....|+++|++++.+++.++.|+. ++||+|+.+.||++.|++........
T Consensus 127 --------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~ 197 (252)
T PRK08220 127 --------SGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELA-PYGVRCNVVSPGSTDTDMQRTLWVDEDGEQ 197 (252)
T ss_pred --------CCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhh-HhCeEEEEEecCcCcchhhhhhccchhhhh
Confidence 68999999999888888899999999999999999999998 89999999999999998643221111
Q ss_pred ----HHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 175 ----EIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 175 ----~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
...+.+....|.+++.+|+|+|++++||+++...+++|++|..|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~ 245 (252)
T PRK08220 198 QVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVD 245 (252)
T ss_pred hhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEEC
Confidence 11233445567888999999999999999999999999998876
No 103
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.98 E-value=3.3e-30 Score=199.96 Aligned_cols=200 Identities=25% Similarity=0.209 Sum_probs=174.2
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
.++....+...+.++.++.+|+++.+++.++++.+.++++++|++|||+|.....++.+.+.++|++.+++|+.+++.++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 119 (245)
T PRK12824 40 AKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVT 119 (245)
T ss_pred HHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHH
Confidence 33344444444567889999999999999999999999999999999999887777888999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCc
Q 027828 88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167 (218)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~ 167 (218)
+++++.+.+.+ .++||++||..+..+.+.+..|+++|+|++++++.++.++. ++||+++.++||++.|++.
T Consensus 120 ~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~~~t~~~ 190 (245)
T PRK12824 120 QPLFAAMCEQG--------YGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGA-RYGITVNCIAPGYIATPMV 190 (245)
T ss_pred HHHHHHHHHhC--------CeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHHH-HhCeEEEEEEEcccCCcch
Confidence 99999998766 68999999999998889999999999999999999999998 8899999999999998865
Q ss_pred cCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 168 VSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
... .+.....+....+.++..+++|+++++.+|+++.+.+++|+.+.+|
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~ 239 (245)
T PRK12824 191 EQM--GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISIN 239 (245)
T ss_pred hhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEEC
Confidence 432 2344445556677888899999999999999988899999998775
No 104
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.98 E-value=2.6e-30 Score=203.33 Aligned_cols=209 Identities=19% Similarity=0.216 Sum_probs=165.0
Q ss_pred CcHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHH----HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHH-------
Q 027828 3 RRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDA----VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN------- 70 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~----~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~------- 70 (218)
|+.++++.+.+++... +.++.++.+|++|.+++ +++++.+.+.++++|+||||||...+.++.+.+.+
T Consensus 34 ~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~ 113 (267)
T TIGR02685 34 RSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKK 113 (267)
T ss_pred CcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccch
Confidence 4567788888888653 45677899999999865 55666666778999999999997655555444443
Q ss_pred ----HHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhh
Q 027828 71 ----GFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146 (218)
Q Consensus 71 ----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el 146 (218)
+|.+++++|+.+++.+++++.|.|++.... .....++||+++|..+..+.+++..|+++|+|+++|+++++.|+
T Consensus 114 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~--~~~~~~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~ 191 (267)
T TIGR02685 114 SLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAE--QRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALEL 191 (267)
T ss_pred hhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc--cCCCCeEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999998654210 01125789999999988888899999999999999999999999
Q ss_pred cCCCCeEEeeeecCcccCCCccCCCChHHHHHhhhhhcCCC-CCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 147 ~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
. ++||+|++|+||++.|+... . ....+.+....++. +..+|+|+++.++||+++...+++|..+.+|
T Consensus 192 ~-~~gi~v~~v~PG~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~ 259 (267)
T TIGR02685 192 A-PLQIRVNGVAPGLSLLPDAM---P-FEVQEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVD 259 (267)
T ss_pred h-hhCeEEEEEecCCccCcccc---c-hhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEEC
Confidence 8 89999999999999765321 1 12223333445654 6789999999999999999999999998876
No 105
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.97 E-value=3.7e-30 Score=199.67 Aligned_cols=203 Identities=23% Similarity=0.241 Sum_probs=174.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+.+ +.++.++.+|+++.++++++++++.+.++++|++|||+|...+.++.+.+.++|+..+++|+.
T Consensus 37 ~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 113 (245)
T PRK12936 37 GTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLT 113 (245)
T ss_pred cCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccH
Confidence 46666776665544 456888999999999999999999999999999999999877777888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.+.+++++ .++||++||..+..+.+....|+++|+++.++++.++.++. +.|+++++|+||+
T Consensus 114 ~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~ 184 (245)
T PRK12936 114 ATFRLTRELTHPMMRRR--------YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIA-TRNVTVNCVAPGF 184 (245)
T ss_pred HHHHHHHHHHHHHHHhC--------CCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhh-HhCeEEEEEEECc
Confidence 99999999999887765 68999999999888889999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++.... .+...+......+..++.+|+++++++.||+++...+++|+.+..|
T Consensus 185 ~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~ 239 (245)
T PRK12936 185 IESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVN 239 (245)
T ss_pred CcCchhccc--ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEEC
Confidence 998764332 1222233344567788899999999999999988889999988765
No 106
>PRK05599 hypothetical protein; Provisional
Probab=99.97 E-value=1.7e-30 Score=201.98 Aligned_cols=185 Identities=16% Similarity=0.088 Sum_probs=159.9
Q ss_pred CCCcHHHHHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++++.+. ++.++.||++|+++++++++++.+.+|++|++|||+|.....++.+.+.+.+.+++++|
T Consensus 29 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n 108 (246)
T PRK05599 29 AARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVD 108 (246)
T ss_pred EeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHH
Confidence 37899999999999987764 47889999999999999999999999999999999998765556667778888999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+++.++|.|.+++. +|+||++||..+..+.+.+..|+++|+|+.+|+++++.|+. ++||+||+|+|
T Consensus 109 ~~~~~~~~~~~~~~m~~~~~-------~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~-~~~I~v~~v~P 180 (246)
T PRK05599 109 YTAQVSMLTVLADELRAQTA-------PAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLH-GSHVRLIIARP 180 (246)
T ss_pred HHhHHHHHHHHHHHHHhcCC-------CCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHHHHhc-CCCceEEEecC
Confidence 99999999999999987531 48999999999998888999999999999999999999998 89999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
|++.|++..... +.....+|+|+|+.++++++..
T Consensus 181 G~v~T~~~~~~~-------------~~~~~~~pe~~a~~~~~~~~~~ 214 (246)
T PRK05599 181 GFVIGSMTTGMK-------------PAPMSVYPRDVAAAVVSAITSS 214 (246)
T ss_pred CcccchhhcCCC-------------CCCCCCCHHHHHHHHHHHHhcC
Confidence 999988643211 1111358999999999999764
No 107
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=3.2e-30 Score=206.45 Aligned_cols=205 Identities=21% Similarity=0.283 Sum_probs=168.5
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
+.+.++++.+++++.+.++.++.+|+++.+++.++++.+.+ +|++|+||||||...+..+.+.+.++|+..+++|+.++
T Consensus 46 ~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~ 124 (306)
T PRK07792 46 SALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGH 124 (306)
T ss_pred chhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHH
Confidence 34567888888888788899999999999999999999998 99999999999988777888899999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
+.+++++.++|+++.... .....|+||++||..+..+.+.+..|+++|+|+++|++.++.|+. ++||+||+|+||. .
T Consensus 125 ~~l~~~~~~~~~~~~~~~-~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~-~~gI~vn~i~Pg~-~ 201 (306)
T PRK07792 125 FLLTRNAAAYWRAKAKAA-GGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALG-RYGVRANAICPRA-R 201 (306)
T ss_pred HHHHHHHHHHHHHhhccc-CCCCCcEEEEECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCeEEEEECCCC-C
Confidence 999999999997542100 001147999999999988888899999999999999999999998 9999999999994 6
Q ss_pred CCCccCCCCh-HHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 164 DTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 164 t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++....... .... . ......+|++++..+.||+++.+.+++|+.+.+|
T Consensus 202 t~~~~~~~~~~~~~~---~---~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~ 251 (306)
T PRK07792 202 TAMTADVFGDAPDVE---A---GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVY 251 (306)
T ss_pred Cchhhhhccccchhh---h---hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEc
Confidence 6654321111 1100 0 0112358999999999999998889999988765
No 108
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=6.5e-30 Score=198.99 Aligned_cols=208 Identities=28% Similarity=0.362 Sum_probs=180.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+.+.. +.++.++.||++++++++.+++++.+.++++|+||||+|... ..++.+.+.++|++.+++|
T Consensus 35 ~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n 113 (251)
T PRK07231 35 TDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVN 113 (251)
T ss_pred EeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhh
Confidence 36888888888777765 567889999999999999999999999999999999999754 3567788999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+++.+.+.|.+++ .++||++||..+..+.++...|+.+|++++.+++.++.++. ++||++++++|
T Consensus 114 ~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~-~~~i~v~~i~p 184 (251)
T PRK07231 114 VKSPYLWTQAAVPAMRGEG--------GGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELG-PDKIRVNAVAP 184 (251)
T ss_pred hHHHHHHHHHHHHHHHhcC--------CcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEEE
Confidence 9999999999999998776 68999999999999999999999999999999999999998 88999999999
Q ss_pred CcccCCCccCCCC--hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.|++...... .+.....+....+.+++.+|+|+|.++++|+++...+++|+.+..|
T Consensus 185 g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 245 (251)
T PRK07231 185 VVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVD 245 (251)
T ss_pred CccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEEC
Confidence 9999887544322 1233344556677888899999999999999988889999988766
No 109
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.97 E-value=7.4e-30 Score=199.83 Aligned_cols=210 Identities=27% Similarity=0.296 Sum_probs=180.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++...+.++.++.+|+++++++.++++.+.++++++|++|||+|.....++.+.+.++|+..+++|+
T Consensus 37 ~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 116 (260)
T PRK06198 37 CGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNV 116 (260)
T ss_pred EcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhh
Confidence 36777888888888877777888999999999999999999999999999999999987777778889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++++.|.+++. .+++|++||..+..+.+....|+.+|+++++++++++.|+. +.||+++.++||
T Consensus 117 ~~~~~~~~~~~~~~~~~~~-------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~~i~v~~i~pg 188 (260)
T PRK06198 117 RAPFFLMQEAIKLMRRRKA-------EGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALL-RNRIRVNGLNIG 188 (260)
T ss_pred HHHHHHHHHHHHHHHhcCC-------CCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeec
Confidence 9999999999999987532 48899999999988888899999999999999999999998 889999999999
Q ss_pred cccCCCccC---CC--ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVS---KL--APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.|++... .. ....+........+.++..+++|+++++.+|+++...+++|+.|..|
T Consensus 189 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~ 251 (260)
T PRK06198 189 WMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFD 251 (260)
T ss_pred cccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeEC
Confidence 999886321 10 11233334445567788899999999999999988889999988765
No 110
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.97 E-value=9.1e-30 Score=197.90 Aligned_cols=204 Identities=32% Similarity=0.415 Sum_probs=176.4
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
|+.+.++++.+++.+.+.++.++.+|+++++++.++++++.+.++++|+||||+|...+..+.+.+.+.++..+++|+.+
T Consensus 39 ~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (247)
T PRK12935 39 SSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSS 118 (247)
T ss_pred CcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 45677778888887777789999999999999999999999999999999999998777777888999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.++++++|.|.+.+ .++||++||..+..+.+++..|+++|++++++++.++.|+. +.||+++.++||++
T Consensus 119 ~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg~v 189 (247)
T PRK12935 119 VFNTTSAVLPYITEAE--------EGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELA-KTNVTVNAICPGFI 189 (247)
T ss_pred HHHHHHHHHHHHHHcC--------CcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHH-HcCcEEEEEEeCCC
Confidence 9999999999998765 68999999998888888899999999999999999999998 88999999999999
Q ss_pred cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.|++.... +...........+.+++..|+|+++++.+++++ ..+++|.++..|
T Consensus 190 ~t~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g~~~~i~ 242 (247)
T PRK12935 190 DTEMVAEV--PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITGQQLNIN 242 (247)
T ss_pred cChhhhhc--cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccCCEEEeC
Confidence 98764432 223333444456667789999999999999975 458899888765
No 111
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.97 E-value=1.2e-29 Score=196.57 Aligned_cols=204 Identities=25% Similarity=0.262 Sum_probs=179.2
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
+.+.+++..+++...+.++.++.+|+++++++.++++.+.+.++++|+||||+|...+..+.+.+.+++++.+++|+.++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 113 (242)
T TIGR01829 34 NEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSV 113 (242)
T ss_pred CHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 66667777777666667889999999999999999999999999999999999987777788889999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
+.+++.+.+.|++.+ .++||++||..+..+.+++..|+++|+++..+++.++.++. ++||+++.+.||++.
T Consensus 114 ~~~~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~-~~~i~v~~i~pg~~~ 184 (242)
T TIGR01829 114 FNVTQPVIDGMRERG--------WGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGA-TKGVTVNTISPGYIA 184 (242)
T ss_pred HHHHHHHHHHHHhcC--------CcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEeeCCCc
Confidence 999999999998876 68999999999888888999999999999999999999998 889999999999999
Q ss_pred CCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 164 DTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 164 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.... .+.....+....|..++.+|+++++.+.||++++..+++|+.|..|
T Consensus 185 t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~ 237 (242)
T TIGR01829 185 TDMVMAM--REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN 237 (242)
T ss_pred Ccccccc--chHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence 8865432 2334444555678888999999999999999998889999998765
No 112
>PLN00015 protochlorophyllide reductase
Probab=99.97 E-value=6.1e-30 Score=205.05 Aligned_cols=209 Identities=13% Similarity=0.063 Sum_probs=164.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.++++++.+++...+.++.++.+|+++.++++++++.+.+.++++|+||||||+... .++.+.+.++|++++++|+
T Consensus 29 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~ 108 (308)
T PLN00015 29 CRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNH 108 (308)
T ss_pred eCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHh
Confidence 688888888888886555678889999999999999999999888999999999997543 3566788999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC-----------------------------------Ccch
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------------------------------TWYQ 125 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------------------------------~~~~ 125 (218)
.+++.+++.++|.|++++.. .|+||++||..+..+ ++.+
T Consensus 109 ~g~~~l~~~~lp~l~~~~~~------~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (308)
T PLN00015 109 LGHFLLSRLLLDDLKKSDYP------SKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGA 182 (308)
T ss_pred HHHHHHHHHHHHHHHhCCCC------CCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhccccCCcHH
Confidence 99999999999999875310 379999999876421 1246
Q ss_pred hHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc-cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhcc
Q 027828 126 IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204 (218)
Q Consensus 126 ~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s 204 (218)
..|++||+|...+++.+++++..+.||+|++|+||++ .|++..................+.+++.+|++.|+.+++|++
T Consensus 183 ~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~ 262 (308)
T PLN00015 183 KAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVS 262 (308)
T ss_pred HHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhcc
Confidence 7899999998888999999986236999999999999 577654322111111111223445667899999999999999
Q ss_pred CCCccccccccc
Q 027828 205 DAAVHRDLIHLL 216 (218)
Q Consensus 205 ~~~~~~~g~~i~ 216 (218)
+.....+|..+.
T Consensus 263 ~~~~~~~G~~~~ 274 (308)
T PLN00015 263 DPSLTKSGVYWS 274 (308)
T ss_pred ccccCCCccccc
Confidence 877778887664
No 113
>PRK09186 flagellin modification protein A; Provisional
Probab=99.97 E-value=1e-29 Score=198.58 Aligned_cols=202 Identities=25% Similarity=0.283 Sum_probs=168.3
Q ss_pred CCcHHHHHHHHHHHHhc-C-CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC---CCCCCCCCHHHHHHHH
Q 027828 2 GRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVI 76 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~-~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~---~~~~~~~~~~~~~~~~ 76 (218)
+|+.++++++.+++... + ..+.++.||++|++++.++++++.+.++++|++|||||... ..++.+.+.++|+..+
T Consensus 35 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~ 114 (256)
T PRK09186 35 DIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENL 114 (256)
T ss_pred ecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHH
Confidence 67888888888888543 3 34567799999999999999999999999999999998542 3467888999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC----------cchhHhHHhHHHHHHHHHHHHhhh
Q 027828 77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------WYQIHVSAAKAAVDSITRSLALEW 146 (218)
Q Consensus 77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------~~~~~y~~sK~a~~~~~~~la~el 146 (218)
++|+.+++.++++++|.|++++ .++||++||..+..+. .....|+++|++++++++.++.|+
T Consensus 115 ~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~ 186 (256)
T PRK09186 115 SLHLGSSFLFSQQFAKYFKKQG--------GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYF 186 (256)
T ss_pred HHhhhhHHHHHHHHHHHHHhcC--------CceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999876 6899999998765321 122469999999999999999999
Q ss_pred cCCCCeEEeeeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 147 GTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 147 ~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
. ++||+|+.++||.+.++. +..+...+....+..++.+|+|+|+++++++++.+.+++|..+..|
T Consensus 187 ~-~~~i~v~~i~Pg~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 251 (256)
T PRK09186 187 K-DSNIRVNCVSPGGILDNQ------PEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVD 251 (256)
T ss_pred C-cCCeEEEEEecccccCCC------CHHHHHHHHhcCCccCCCCHHHhhhhHhheeccccccccCceEEec
Confidence 8 899999999999987653 1223334444456667889999999999999998999999998876
No 114
>PRK12742 oxidoreductase; Provisional
Probab=99.97 E-value=1e-29 Score=196.43 Aligned_cols=192 Identities=23% Similarity=0.286 Sum_probs=160.2
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
+.++++++.+++ .+.++.+|+++.+++.++++ .++++|++|||+|.....+..+.+.++|+..+++|+.++
T Consensus 40 ~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~----~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 110 (237)
T PRK12742 40 SKDAAERLAQET-----GATAVQTDSADRDAVIDVVR----KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAP 110 (237)
T ss_pred CHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHH----HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHH
Confidence 445555544433 25678899999998877764 357899999999987666777889999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-cCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
+.+++.+.+.|.+ .++||++||..+. .+.++...|+++|++++.+++.++.++. ++||+||+|+||++
T Consensus 111 ~~l~~~~~~~~~~----------~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~-~~gi~v~~v~Pg~~ 179 (237)
T PRK12742 111 YHASVEAARQMPE----------GGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFG-PRGITINVVQPGPI 179 (237)
T ss_pred HHHHHHHHHHHhc----------CCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHh-hhCeEEEEEecCcc
Confidence 9999999999864 5889999998874 5678889999999999999999999998 89999999999999
Q ss_pred cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|++..... ...+......|++|+.+|+|+++.+.||+++.+.+++|..+.+|
T Consensus 180 ~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~d 232 (237)
T PRK12742 180 DTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTID 232 (237)
T ss_pred cCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeC
Confidence 998744321 12233445568889999999999999999999999999999887
No 115
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2.2e-29 Score=196.21 Aligned_cols=208 Identities=28% Similarity=0.385 Sum_probs=179.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.+.+++..+++. .+.++.++.||++|+++++++++.+.++++++|+||||+|...+..+.+.+.++++..+++|+
T Consensus 35 ~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 113 (252)
T PRK06138 35 ADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNV 113 (252)
T ss_pred ecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhh
Confidence 3688888888777776 456788999999999999999999999999999999999987777788899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++.+++.|++.+ .++||++||..+..+.+....|+.+|++++.+++.++.|+. ++||++++++||
T Consensus 114 ~~~~~l~~~~~~~~~~~~--------~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~pg 184 (252)
T PRK06138 114 GGVFLWAKYAIPIMQRQG--------GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHA-TDGIRVNAVAPG 184 (252)
T ss_pred hhHHHHHHHHHHHHHhcC--------CeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCeEEEEEEEC
Confidence 999999999999998876 68999999999888888899999999999999999999998 889999999999
Q ss_pred cccCCCccCCC----ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKL----APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.|++..... .+...........+..++.+++|+++++++++++...+++|..+..|
T Consensus 185 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 246 (252)
T PRK06138 185 TIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVD 246 (252)
T ss_pred CccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEEC
Confidence 99988654321 12223333334456666889999999999999988889999888765
No 116
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2.3e-29 Score=198.72 Aligned_cols=208 Identities=25% Similarity=0.327 Sum_probs=177.8
Q ss_pred CCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhh
Q 027828 2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~ 78 (218)
+|+.++++...+++... +.++.++.+|+++++++.++++++.++++++|++|||+|.... .++.+.+.++|...+++
T Consensus 38 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~ 117 (276)
T PRK05875 38 GRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDL 117 (276)
T ss_pred eCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHH
Confidence 67778888877777654 3578889999999999999999999999999999999996543 56777889999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.+++++.+.|.+.+ .++||++||..+..+.++...|+++|++++.+++.++.++. ..||++++|+
T Consensus 118 n~~~~~~l~~~~~~~~~~~~--------~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~~i~ 188 (276)
T PRK05875 118 NVNGTMYVLKHAARELVRGG--------GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELG-PSWVRVNSIR 188 (276)
T ss_pred hhHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhc-ccCeEEEEEe
Confidence 99999999999999998766 68999999999888888889999999999999999999998 8899999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||+++|++..................|..++.+++|+++++.||++....+++|+.+..|
T Consensus 189 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 248 (276)
T PRK05875 189 PGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVD 248 (276)
T ss_pred cCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEEC
Confidence 999999876543333333333445567788899999999999999988888888877654
No 117
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.97 E-value=6.3e-30 Score=188.09 Aligned_cols=201 Identities=22% Similarity=0.182 Sum_probs=177.1
Q ss_pred HHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHhhhhhh
Q 027828 7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~ 82 (218)
++++-.+++.+.-.....++||+++++++.++++++++++|++|+|||+.++.+. .++.+.+.|.|...+++..++
T Consensus 43 ~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS 122 (259)
T COG0623 43 RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYS 122 (259)
T ss_pred HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhh
Confidence 4555445554432335679999999999999999999999999999999998763 678889999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
...+.+++.|.|.+ +|.||.++=.++.+..|.+..-+++|+++++-+|.||.+++ ++|||||+|+-|++
T Consensus 123 ~~~lak~a~~lM~~----------ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG-~~gIRVNaISAGPI 191 (259)
T COG0623 123 FTALAKAARPLMNN----------GGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLG-KEGIRVNAISAGPI 191 (259)
T ss_pred HHHHHHHHHHhcCC----------CCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHHHHhC-ccCeEEeeecccch
Confidence 99999999999987 68899999999999999999999999999999999999999 99999999999999
Q ss_pred cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|=-...-..-..+....+...|++|..+.||++....||+|+-+..++|+++.+|
T Consensus 192 rTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD 247 (259)
T COG0623 192 RTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVD 247 (259)
T ss_pred HHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcccccceEEEc
Confidence 97543333344666777888899999999999999999999999999999999988
No 118
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.97 E-value=5.5e-30 Score=196.34 Aligned_cols=179 Identities=22% Similarity=0.201 Sum_probs=146.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRTV 75 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~------~~~~~~~~~~~~~~ 75 (218)
+|+.++++++.+++ ++.++.+|++++++++++++.+.+ ++|++|||+|.... .++.+ +.++|+++
T Consensus 31 ~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~ 101 (223)
T PRK05884 31 GARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNA 101 (223)
T ss_pred eCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHH
Confidence 57777777766654 356789999999999999887653 69999999984321 12333 57899999
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
+++|+.+++.++++++|.|++ .|+||++||.. .+....|+++|+|+.+|++.++.|+. ++||+||
T Consensus 102 ~~~N~~~~~~~~~~~~~~~~~----------~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~e~~-~~gI~v~ 166 (223)
T PRK05884 102 LDATVLSAVLTVQSVGDHLRS----------GGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFG-TRGITIN 166 (223)
T ss_pred HHHHHHHHHHHHHHHHHHhhc----------CCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHHHhh-hcCeEEE
Confidence 999999999999999999964 58899999976 34567899999999999999999998 9999999
Q ss_pred eeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|+||++.|++... . ...|. .+|+|+++.+.||+++.+.+++|+.+.+|
T Consensus 167 ~v~PG~v~t~~~~~----------~-~~~p~---~~~~~ia~~~~~l~s~~~~~v~G~~i~vd 215 (223)
T PRK05884 167 AVACGRSVQPGYDG----------L-SRTPP---PVAAEIARLALFLTTPAARHITGQTLHVS 215 (223)
T ss_pred EEecCccCchhhhh----------c-cCCCC---CCHHHHHHHHHHHcCchhhccCCcEEEeC
Confidence 99999999874211 0 11222 38999999999999999999999998876
No 119
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.97 E-value=1.6e-29 Score=197.58 Aligned_cols=203 Identities=22% Similarity=0.314 Sum_probs=168.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n 79 (218)
+|+..++++..+++. ..++.+|+++.++++++++++.+.++++|++|||+|...+ .++.+.+.+.|++.+++|
T Consensus 38 ~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n 112 (255)
T PRK06057 38 DIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVN 112 (255)
T ss_pred eCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHh
Confidence 567666666555542 2578999999999999999999999999999999997543 456778899999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC-cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
+.+++.+++.++|.|++++ .++||++||..+..+. +++..|+++|+++..+++.++.++. ++||+|+.|+
T Consensus 113 ~~~~~~l~~~~~~~l~~~~--------~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~-~~gi~v~~i~ 183 (255)
T PRK06057 113 LTSVYLCCKAALPHMVRQG--------KGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFA-RQGIRVNALC 183 (255)
T ss_pred cHHHHHHHHHHHHHHHHhC--------CcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHH-hhCcEEEEEe
Confidence 9999999999999998765 6899999998776655 4678899999999999999999998 8899999999
Q ss_pred cCcccCCCccCCCC-hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||+++|++...... ............|.+++.+|+|+++++.||+++...+++|+++.+|
T Consensus 184 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 244 (255)
T PRK06057 184 PGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVD 244 (255)
T ss_pred eCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEEC
Confidence 99999987543321 1111222333467788999999999999999999999999998876
No 120
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.97 E-value=1.9e-29 Score=197.56 Aligned_cols=208 Identities=21% Similarity=0.276 Sum_probs=178.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|++++++++.+++.+.+.++.++.+|+++.+++.++++.+.++++++|+||||+|.....++.+.+.++++..+++|+.
T Consensus 38 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 117 (262)
T PRK13394 38 DLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVD 117 (262)
T ss_pred eCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhh
Confidence 68888888999988877778889999999999999999999999999999999999877777778889999999999999
Q ss_pred hHHHHHHHHHHHH-HhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 82 GTFIMCHEALKYL-KKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 82 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
+++.+++++++.+ ++.+ .++||++||..+..+.+....|+++|+++.++++.++.++. +.||+++.|+||
T Consensus 118 ~~~~~~~~~l~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~-~~~i~v~~v~pg 188 (262)
T PRK13394 118 GAFLTTKAALKHMYKDDR--------GGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGA-KHNVRSHVVCPG 188 (262)
T ss_pred hHHHHHHHHHHHHHhhcC--------CcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeC
Confidence 9999999999999 5554 68999999998888888889999999999999999999998 889999999999
Q ss_pred cccCCCccCCCCh---------HH-HHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAP---------EE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+++|+........ +. ....+....+.+++.+++|+++++++|++.....++|..+..|
T Consensus 189 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~ 256 (262)
T PRK13394 189 FVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVS 256 (262)
T ss_pred cccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeC
Confidence 9998864332211 11 1112233456678899999999999999987788899888765
No 121
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.97 E-value=4.6e-29 Score=194.70 Aligned_cols=205 Identities=27% Similarity=0.299 Sum_probs=175.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHh------CCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF------GKLDILVNAAAGNFLVPAEDLSPNGFRTV 75 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~------~~ld~li~~ag~~~~~~~~~~~~~~~~~~ 75 (218)
+|+++++++..+++...+.++.++.+|++|++++.++++++.+.+ +++|++|||+|......+.+.+.+.|+..
T Consensus 38 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~ 117 (254)
T PRK12746 38 GRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEI 117 (254)
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHH
Confidence 578888888888887666778899999999999999999999887 47999999999877777888899999999
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
+++|+.+++.+++.+.+.|.+ .+++|++||..+..+.+++..|+++|++++.++++++.++. ++|++++
T Consensus 118 ~~~n~~~~~~l~~~~~~~~~~----------~~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~v~ 186 (254)
T PRK12746 118 MAVNIKAPFFLIQQTLPLLRA----------EGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLG-ERGITVN 186 (254)
T ss_pred HHHHhHHHHHHHHHHHHHhhc----------CCEEEEECCHHhcCCCCCCcchHhhHHHHHHHHHHHHHHHh-hcCcEEE
Confidence 999999999999999998865 47899999999888889999999999999999999999998 8899999
Q ss_pred eeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCcccccccccc
Q 027828 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLD 217 (218)
Q Consensus 156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~ 217 (218)
.++||++.|++.......+..........+.++..+++|+++++.+++++.+.+++|..+..
T Consensus 187 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i 248 (254)
T PRK12746 187 TIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDV 248 (254)
T ss_pred EEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEe
Confidence 99999999887544333333334344455677888999999999999998878888876644
No 122
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.97 E-value=5.2e-29 Score=194.66 Aligned_cols=209 Identities=27% Similarity=0.329 Sum_probs=181.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.+++++..+++...+.++.++.||++++++++++++.+.+.++++|+||||+|.....++.+.+.++++..+++|+
T Consensus 34 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~ 113 (258)
T PRK12429 34 ADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIML 113 (258)
T ss_pred EeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcc
Confidence 36888889998888887778899999999999999999999999999999999999988777888889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++.+++.|++++ .++||++||..+..+.+++..|+++|+++..+++.++.|+. +.||+++.++||
T Consensus 114 ~~~~~l~~~~~~~~~~~~--------~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~-~~~i~v~~~~pg 184 (258)
T PRK12429 114 DGAFLTTKAALPIMKAQG--------GGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGA-THGVTVNAICPG 184 (258)
T ss_pred hhhHHHHHHHHHHHHhcC--------CeEEEEEcchhhccCCCCcchhHHHHHHHHHHHHHHHHHhc-ccCeEEEEEecC
Confidence 999999999999999876 68999999999999999999999999999999999999998 889999999999
Q ss_pred cccCCCccCCCC----------hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLA----------PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.|+....... .......+....+.+++.+++|+|+++.+|+++....++|+++..|
T Consensus 185 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 252 (258)
T PRK12429 185 YVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVD 252 (258)
T ss_pred CCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeC
Confidence 999876432211 1111222333445677899999999999999887788889887765
No 123
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.97 E-value=1.9e-29 Score=204.15 Aligned_cols=193 Identities=23% Similarity=0.275 Sum_probs=167.2
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++.+.|.++.++.+|++|.++++++++.+.++++++|++|||+|.....++.+.+.+++++.+++|+
T Consensus 38 ~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~ 117 (334)
T PRK07109 38 LARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTY 117 (334)
T ss_pred EECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHh
Confidence 36889999999999988888999999999999999999999999999999999999987777888999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcC-CCCeEEeeeec
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGT-DYAIRVNGIAP 159 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~-~~gi~v~~v~p 159 (218)
.++++++++++|.|++++ .|+||++||..+..+.+.+..|+++|+++.+|+++++.|+.. ..+|+|+.|+|
T Consensus 118 ~g~~~~~~~~l~~~~~~~--------~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~P 189 (334)
T PRK07109 118 LGVVHGTLAALRHMRPRD--------RGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQP 189 (334)
T ss_pred HHHHHHHHHHHHHHHhcC--------CcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeC
Confidence 999999999999999876 689999999999999999999999999999999999999861 24799999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
|.+.|++..... ... .....+..+..+|+++|++++++++..
T Consensus 190 g~v~T~~~~~~~--~~~---~~~~~~~~~~~~pe~vA~~i~~~~~~~ 231 (334)
T PRK07109 190 PAVNTPQFDWAR--SRL---PVEPQPVPPIYQPEVVADAILYAAEHP 231 (334)
T ss_pred CCccCchhhhhh--hhc---cccccCCCCCCCHHHHHHHHHHHHhCC
Confidence 999988543211 000 011123456779999999999999754
No 124
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=1.5e-29 Score=195.26 Aligned_cols=183 Identities=24% Similarity=0.279 Sum_probs=157.6
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
++.++.+|++++ ++++.+.++++|++|||+|.... .++.+.+.++|++.+++|+.+++++++++.|.+++++
T Consensus 46 ~~~~~~~D~~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~- 118 (235)
T PRK06550 46 NFHFLQLDLSDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK- 118 (235)
T ss_pred cEEEEECChHHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-
Confidence 456788999887 45555567899999999997543 5677889999999999999999999999999998876
Q ss_pred CCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHh
Q 027828 100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~ 179 (218)
.++||++||..+..+.+.+..|+.+|++++.++++++.|+. ++||+|++|+||+++|++......++.....
T Consensus 119 -------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~-~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~ 190 (235)
T PRK06550 119 -------SGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYA-KDGIQVFGIAPGAVKTPMTAADFEPGGLADW 190 (235)
T ss_pred -------CcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeeCCccCcccccccCchHHHHH
Confidence 68999999999988888899999999999999999999998 8999999999999999875444334444445
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 180 ATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 180 ~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.....|++++.+|+|+|++++||+++.+.+++|+.+..|
T Consensus 191 ~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~ 229 (235)
T PRK06550 191 VARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPID 229 (235)
T ss_pred HhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEEC
Confidence 556678889999999999999999998999999998876
No 125
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2.8e-29 Score=194.33 Aligned_cols=198 Identities=19% Similarity=0.228 Sum_probs=168.9
Q ss_pred CCCcHHHHHHHHHHHHhcC-CCeeEEEecCCC--HHHHHHHHHHHHHHh-CCccEEEeCCCCCCC-CCCCCCCHHHHHHH
Q 027828 1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRK--REDAVRVVESTINHF-GKLDILVNAAAGNFL-VPAEDLSPNGFRTV 75 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~-~~~~~~~~D~s~--~~~~~~~~~~~~~~~-~~ld~li~~ag~~~~-~~~~~~~~~~~~~~ 75 (218)
++|+.++++++.+++.+.+ .++.++.+|+++ .+++.++++++.+.+ +++|++|||||.... .++.+.+.++|++.
T Consensus 36 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~ 115 (239)
T PRK08703 36 VARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQ 115 (239)
T ss_pred EeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHH
Confidence 3688888988888887653 467788999986 678999999999988 799999999997543 57788999999999
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCC-CeEE
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDY-AIRV 154 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~-gi~v 154 (218)
+++|+.+++.++++++|.|.+.+ .+++|+++|..+..+.+++..|+++|++++.+++.++.|+. ++ +|+|
T Consensus 116 ~~~n~~g~~~l~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~~i~v 186 (239)
T PRK08703 116 YRINTVAPMGLTRALFPLLKQSP--------DASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWE-RFGNLRA 186 (239)
T ss_pred HHHhhhHHHHHHHHHHHHHHhCC--------CCEEEEEeccccccCCCCccchHHhHHHHHHHHHHHHHHhc-cCCCeEE
Confidence 99999999999999999998765 68999999999988888889999999999999999999998 66 6999
Q ss_pred eeeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCcccccccccc
Q 027828 155 NGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLD 217 (218)
Q Consensus 155 ~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~ 217 (218)
++|.||+++|++......... ..+..++++++..++|++++++.+++|++|.+
T Consensus 187 ~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 239 (239)
T PRK08703 187 NVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWWASAESKGRSGEIVYL 239 (239)
T ss_pred EEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHHhCccccCcCCeEeeC
Confidence 999999999986443221110 11346999999999999999999999998863
No 126
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.97 E-value=3.4e-29 Score=197.69 Aligned_cols=196 Identities=20% Similarity=0.174 Sum_probs=163.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++...+.++.++.+|++|.+++.++++++.+++|++|+||||||.....++.+.+.++|+..+++|+.
T Consensus 37 ~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~ 116 (275)
T PRK05876 37 DVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLW 116 (275)
T ss_pred eCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhH
Confidence 67888899999998877778899999999999999999999999999999999999887788899999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.++++++|.|.+++. .|+||++||..+..+.++...|+++|+++.+|+++|+.|+. ++||+|++|+||+
T Consensus 117 g~~~l~~~~~p~m~~~~~-------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~Pg~ 188 (275)
T PRK05876 117 GSIHTVEAFLPRLLEQGT-------GGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT-ADGIGVSVLCPMV 188 (275)
T ss_pred HHHHHHHHHHHHHHhcCC-------CCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHHHhh-hcCcEEEEEEeCc
Confidence 999999999999987642 48999999999999999999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCCh--HHH-H----HhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 162 IKDTAGVSKLAP--EEI-R----SKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 162 v~t~~~~~~~~~--~~~-~----~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+.|++....... ... . .............+|+++|+.++..+..
T Consensus 189 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~ 239 (275)
T PRK05876 189 VETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA 239 (275)
T ss_pred cccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence 999864331100 000 0 0000011122357999999999877643
No 127
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=6.1e-29 Score=214.80 Aligned_cols=198 Identities=19% Similarity=0.190 Sum_probs=169.1
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.++++..|.++.++.||++|++++.++++++.+.+|++|+||||||.....++.+.+.++|++++++|+
T Consensus 345 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~ 424 (582)
T PRK05855 345 SDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNL 424 (582)
T ss_pred EeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhh
Confidence 36889999999999988788899999999999999999999999999999999999998778888999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.++++++|.|.+++. .|+||++||..+..+.++...|+++|+|+++++++++.|+. ++||+|++|+||
T Consensus 425 ~g~~~~~~~~~~~~~~~~~-------~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg 496 (582)
T PRK05855 425 WGVIHGCRLFGRQMVERGT-------GGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELA-AAGIGVTAICPG 496 (582)
T ss_pred HHHHHHHHHHHHHHHhcCC-------CcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEEeC
Confidence 9999999999999988652 48999999999999999999999999999999999999998 899999999999
Q ss_pred cccCCCccCCCCh----HH--HHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 161 PIKDTAGVSKLAP----EE--IRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 161 ~v~t~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
++.|++......+ +. .........+..+..+|+++|++++++++..
T Consensus 497 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~ 548 (582)
T PRK05855 497 FVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN 548 (582)
T ss_pred CCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence 9999875543211 00 0001111222334568999999999999754
No 128
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.97 E-value=1.9e-28 Score=190.35 Aligned_cols=210 Identities=24% Similarity=0.272 Sum_probs=177.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~ 80 (218)
.|+.+++++..+++...+.++..+.+|++|+++++++++.+.+.++++|++|||+|.. ...++.+.+.++|+..+++|+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~ 112 (247)
T PRK09730 33 QQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNV 112 (247)
T ss_pred CCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhh
Confidence 4777788888888877777788999999999999999999999999999999999975 345677889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcc-hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
.+++.+++++++.+.+...+. .|+||++||..+..+.+. +..|+++|++++.+++.++.|+. ++||+++.++|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~-----~g~~v~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~i~p 186 (247)
T PRK09730 113 TGYFLCCREAVKRMALKHGGS-----GGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVA-AQGIRVNCVRP 186 (247)
T ss_pred HHHHHHHHHHHHHHHhcCCCC-----CcEEEEECchhhccCCCCcccchHhHHHHHHHHHHHHHHHHH-HhCeEEEEEEe
Confidence 999999999999998753211 578999999988777775 46899999999999999999998 88999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+++|+....... +..........|..+..+|+|+|+.+.+++++...+++|..+..|
T Consensus 187 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~ 244 (247)
T PRK09730 187 GFIYTEMHASGGE-PGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLA 244 (247)
T ss_pred CCCcCcccccCCC-HHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecC
Confidence 9999886443322 233344455567777889999999999999988888999888765
No 129
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=2.4e-28 Score=190.26 Aligned_cols=204 Identities=27% Similarity=0.323 Sum_probs=172.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC---------CCCCHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA---------EDLSPNGF 72 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~---------~~~~~~~~ 72 (218)
+|+.+++++..+++...+.++.++.+|+++.++++++++.+.+.++++|++|||+|......+ .+.+.++|
T Consensus 36 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~ 115 (253)
T PRK08217 36 DLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQF 115 (253)
T ss_pred eCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHH
Confidence 578888888888888777789999999999999999999999888999999999996543221 56788999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCe
Q 027828 73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAI 152 (218)
Q Consensus 73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi 152 (218)
+.++++|+.+++.+.+.+.|.|.++.. .++||++||.. ..+.++...|+++|+|+++++++++.++. ++||
T Consensus 116 ~~~~~~n~~~~~~~~~~~~~~l~~~~~-------~~~iv~~ss~~-~~~~~~~~~Y~~sK~a~~~l~~~la~~~~-~~~i 186 (253)
T PRK08217 116 QSVIDVNLTGVFLCGREAAAKMIESGS-------KGVIINISSIA-RAGNMGQTNYSASKAGVAAMTVTWAKELA-RYGI 186 (253)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHhcCC-------CeEEEEEcccc-ccCCCCCchhHHHHHHHHHHHHHHHHHHH-HcCc
Confidence 999999999999999999999987632 57899999874 45677889999999999999999999998 8899
Q ss_pred EEeeeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 153 ~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++++++||++.|++.... .+...+.+....|.+++.+|+|+++++.+|+++ .+++|.++..|
T Consensus 187 ~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~g~~~~~~ 248 (253)
T PRK08217 187 RVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFIIEN--DYVTGRVLEID 248 (253)
T ss_pred EEEEEeeCCCcCcccccc--CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcC--CCcCCcEEEeC
Confidence 999999999998875432 234445555667778889999999999999963 57899988765
No 130
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.97 E-value=1.7e-28 Score=214.19 Aligned_cols=209 Identities=24% Similarity=0.281 Sum_probs=178.6
Q ss_pred CCcHHHHHHHHHHHHhc-C-CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSL-G-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~-~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+|+.++++++.+++... + .++..+.+|+++.+++.++++++.+.+|++|+||||||.....++.+.+.++|+..+++|
T Consensus 445 ~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN 524 (676)
T TIGR02632 445 DLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDIL 524 (676)
T ss_pred eCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHH
Confidence 57888888888877643 2 367889999999999999999999999999999999998777788888999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+++.+++.|++++. .++||++||..+..+.++...|+++|++++.+++.++.|+. ++||+||+|+|
T Consensus 525 ~~g~~~l~~~al~~m~~~~~-------~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~-~~gIrVn~V~P 596 (676)
T TIGR02632 525 ATGYFLVAREAFRQMREQGL-------GGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGG-TYGIRVNTVNP 596 (676)
T ss_pred HHHHHHHHHHHHHHHHhcCC-------CCEEEEEeChhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEEC
Confidence 99999999999999987642 47899999999998999999999999999999999999998 89999999999
Q ss_pred CcccCCC--ccCCC----------ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTA--GVSKL----------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|.+.++. +...+ ......+.+..+.++++..+|+|+|+++.||+++.+.+++|+.|..|
T Consensus 597 g~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vD 667 (676)
T TIGR02632 597 DAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVD 667 (676)
T ss_pred CceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEEC
Confidence 9986532 11111 12223334556778889999999999999999988889999999876
No 131
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2.8e-28 Score=189.53 Aligned_cols=203 Identities=27% Similarity=0.351 Sum_probs=174.9
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
|+.+.++++.+++...+.++.++.+|+++.++++++++++.+.++++|++|||+|...+.++.+.+.++|+..+++|+.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (249)
T PRK12827 42 RGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDG 121 (249)
T ss_pred ccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhH
Confidence 45667777888887777788999999999999999999999999999999999998877788889999999999999999
Q ss_pred HHHHHHHHH-HHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 83 TFIMCHEAL-KYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 83 ~~~l~~~~~-~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
++.+++++. +.++++. .++||++||..+..+.+++..|+.+|++++.+++.++.++. ++|++++.++||+
T Consensus 122 ~~~l~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~i~pg~ 192 (249)
T PRK12827 122 FFNVTQAALPPMIRARR--------GGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELA-PRGITVNAVAPGA 192 (249)
T ss_pred HHHHHHHHHHHHHhcCC--------CeEEEEECCchhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEEECC
Confidence 999999999 5555554 58899999999988888999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++....... +......+..+..+++++++.+++|+++....++|+.+..|
T Consensus 193 v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 245 (249)
T PRK12827 193 INTPMADNAAPT----EHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVD 245 (249)
T ss_pred cCCCcccccchH----HHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeC
Confidence 999865443221 22334456666779999999999999988889999988765
No 132
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.97 E-value=1.7e-28 Score=193.55 Aligned_cols=205 Identities=17% Similarity=0.159 Sum_probs=169.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCC-eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~-~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
++|+.+.++++.+++...+.+ +.++.+|+++++++.++++++.+.++++|++|||+|.....++.+.+.++|+..+++|
T Consensus 30 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n 109 (272)
T PRK07832 30 TDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVN 109 (272)
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHH
Confidence 368888888888888776554 4567899999999999999999999999999999998777788899999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.++++++|.|.+++. .++||++||..+..+.+.+..|+++|+++.++++.++.|+. ++||+|+.|+|
T Consensus 110 ~~~~~~l~~~~~~~l~~~~~-------~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~v~P 181 (272)
T PRK07832 110 LMGPIHVIETFVPPMVAAGR-------GGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLA-RHGIGVSVVVP 181 (272)
T ss_pred hHHHHHHHHHHHHHHHhCCC-------CcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-hcCcEEEEEec
Confidence 99999999999999977531 58999999999888888899999999999999999999998 88999999999
Q ss_pred CcccCCCccCCCC-----hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCcccccccc
Q 027828 160 GPIKDTAGVSKLA-----PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHL 215 (218)
Q Consensus 160 G~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i 215 (218)
|+++|++...... .......+... ..++..+|+++|+.+++++. ...++++..+
T Consensus 182 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vA~~~~~~~~-~~~~~~~~~~ 240 (272)
T PRK07832 182 GAVKTPLVNTVEIAGVDREDPRVQKWVDR-FRGHAVTPEKAAEKILAGVE-KNRYLVYTSP 240 (272)
T ss_pred CcccCcchhcccccccCcchhhHHHHHHh-cccCCCCHHHHHHHHHHHHh-cCCeEEecCc
Confidence 9999987543210 11111112221 23467899999999999995 4567776644
No 133
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.97 E-value=1.8e-29 Score=195.73 Aligned_cols=172 Identities=22% Similarity=0.164 Sum_probs=143.2
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCC
Q 027828 23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA 102 (218)
Q Consensus 23 ~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 102 (218)
.++++|+++.++++++++++. +++|+||||||.... +.++..+++|+.+++.+++.++|.|.+
T Consensus 26 ~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~------ 88 (241)
T PRK12428 26 GFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--------APVELVARVNFLGLRHLTEALLPRMAP------ 88 (241)
T ss_pred HhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--------CCHHHhhhhchHHHHHHHHHHHHhccC------
Confidence 457899999999999988774 689999999997531 347899999999999999999998864
Q ss_pred CCCCCceEEEeccccccc---------------------------CCcchhHhHHhHHHHHHHHHHHH-hhhcCCCCeEE
Q 027828 103 SSSSGGIIINISATLHYT---------------------------ATWYQIHVSAAKAAVDSITRSLA-LEWGTDYAIRV 154 (218)
Q Consensus 103 ~~~~~~~iv~iss~~~~~---------------------------~~~~~~~y~~sK~a~~~~~~~la-~el~~~~gi~v 154 (218)
.|+||++||..+.. +.++...|+++|+|+.++++.++ .|+. ++||+|
T Consensus 89 ----~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~-~~girv 163 (241)
T PRK12428 89 ----GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFG-ARGIRV 163 (241)
T ss_pred ----CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhh-ccCeEE
Confidence 58999999998763 45677899999999999999999 9998 899999
Q ss_pred eeeecCcccCCCccCCCCh--HHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 155 NGIAPGPIKDTAGVSKLAP--EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 155 ~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+|+||++.|++....... +... .....|++++.+|+|+|+++.||+++.+.+++|+.+.+|
T Consensus 164 n~v~PG~v~T~~~~~~~~~~~~~~~--~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vd 227 (241)
T PRK12428 164 NCVAPGPVFTPILGDFRSMLGQERV--DSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVD 227 (241)
T ss_pred EEeecCCccCcccccchhhhhhHhh--hhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEec
Confidence 9999999999975432211 1111 112357788899999999999999998999999998876
No 134
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2.2e-28 Score=192.65 Aligned_cols=196 Identities=19% Similarity=0.152 Sum_probs=167.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++...+.++.++.||+++++++..+++.+.++++++|+||||+|......+.+.+.++|++.+++|+.
T Consensus 31 ~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (270)
T PRK05650 31 DVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLM 110 (270)
T ss_pred eCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccH
Confidence 58888899999988887788999999999999999999999999999999999999887778889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.++|.|++++ .++||++||..+..+.+..+.|+++|+++++++++++.|+. +.||+++.|+||+
T Consensus 111 ~~~~~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~ 181 (270)
T PRK05650 111 GVVKGCKAFLPLFKRQK--------SGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELA-DDEIGVHVVCPSF 181 (270)
T ss_pred HHHHHHHHHHHHHHhCC--------CCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecCc
Confidence 99999999999998876 68999999999999999999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
+.|++........................+++++|+.++..+...
T Consensus 182 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 182 FQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred cccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence 999875543221111111111111223569999999999988754
No 135
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.97 E-value=3.8e-28 Score=188.54 Aligned_cols=206 Identities=29% Similarity=0.388 Sum_probs=179.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++...+.++.++.+|+++++++.++++.+.+.++++|++||++|.....++.+.+.+++++.+++|+.
T Consensus 37 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 116 (247)
T PRK05565 37 DINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLT 116 (247)
T ss_pred CCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhH
Confidence 68888888888888776677899999999999999999999999999999999999876677788899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+.+.+.+.+.+++ .+++|++||..+..+.+....|+.+|++++.+++.++.++. +.|+++++++||+
T Consensus 117 ~~~~l~~~~~~~~~~~~--------~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~gi~~~~v~pg~ 187 (247)
T PRK05565 117 GVMLLTRYALPYMIKRK--------SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELA-PSGIRVNAVAPGA 187 (247)
T ss_pred HHHHHHHHHHHHHHhcC--------CcEEEEECCHhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEEECC
Confidence 99999999999998876 68999999999988888899999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|+...... + ..........+..+..+++++++.+++|++.....++|+.+..|
T Consensus 188 v~t~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~ 242 (247)
T PRK05565 188 IDTEMWSSFS-E-EDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVD 242 (247)
T ss_pred ccCccccccC-h-HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEec
Confidence 9987654432 2 12222233455667789999999999999998999999998776
No 136
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.97 E-value=2.2e-28 Score=189.46 Aligned_cols=194 Identities=23% Similarity=0.264 Sum_probs=167.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++.+.+.++.++.+|+++++++.++++.+.+.++++|++|||+|.....++.+.+.++++..+++|+
T Consensus 36 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~ 115 (241)
T PRK07454 36 VARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNL 115 (241)
T ss_pred EeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhcc
Confidence 36888888888888877777899999999999999999999999999999999999987777788889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++.+.+.|.+.+ .++||++||..+..+.+.+..|+.+|++++.+++.++.|+. ++||++++|+||
T Consensus 116 ~~~~~~~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~-~~gi~v~~i~pg 186 (241)
T PRK07454 116 TSVFQCCSAVLPGMRARG--------GGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEER-SHGIRVCTITLG 186 (241)
T ss_pred HHHHHHHHHHHHHHHhcC--------CcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEecC
Confidence 999999999999998876 68999999999988888999999999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCcccc
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRD 211 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~ 211 (218)
++.|++....... ......+..+|+++|+++++|+++......
T Consensus 187 ~i~t~~~~~~~~~--------~~~~~~~~~~~~~va~~~~~l~~~~~~~~~ 229 (241)
T PRK07454 187 AVNTPLWDTETVQ--------ADFDRSAMLSPEQVAQTILHLAQLPPSAVI 229 (241)
T ss_pred cccCCcccccccc--------cccccccCCCHHHHHHHHHHHHcCCcccee
Confidence 9998864321110 111123467999999999999997655433
No 137
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.97 E-value=6.5e-28 Score=188.73 Aligned_cols=200 Identities=21% Similarity=0.266 Sum_probs=168.3
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
|+.+.++++.+++...+.++.++.||++|.+++.++++++.+.++++|+||||||.....++.+.+.++|++.+++|+.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 121 (258)
T PRK09134 42 RSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRA 121 (258)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHH
Confidence 45667778888887767788999999999999999999999999999999999998777778889999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.+++++.+.+.+.. .++||+++|..+..+.|.+..|+++|++++.+++.++.++. +. |+|++|+||++
T Consensus 122 ~~~l~~~~~~~~~~~~--------~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~-~~-i~v~~i~PG~v 191 (258)
T PRK09134 122 PFVLAQAFARALPADA--------RGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALA-PR-IRVNAIGPGPT 191 (258)
T ss_pred HHHHHHHHHHHHHhcC--------CceEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhc-CC-cEEEEeecccc
Confidence 9999999999998765 68999999987777778888999999999999999999987 65 99999999999
Q ss_pred cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.|+... ....+ .......+.++..+++|+|++++++++. .+++|+.+..|
T Consensus 192 ~t~~~~---~~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~g~~~~i~ 241 (258)
T PRK09134 192 LPSGRQ---SPEDF-ARQHAATPLGRGSTPEEIAAAVRYLLDA--PSVTGQMIAVD 241 (258)
T ss_pred cCCccc---ChHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCCEEEEC
Confidence 875321 11222 2233445677788999999999999973 56788776654
No 138
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.97 E-value=4.7e-28 Score=188.52 Aligned_cols=204 Identities=27% Similarity=0.340 Sum_probs=172.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC---CCCCCCCCHHHHHHHHhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF---LVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~---~~~~~~~~~~~~~~~~~~ 78 (218)
+|+.+.++++.+++...+.++.++.+|+++.++++.+++.+.+.++++|+||||+|... ..++.+.+.+++++.+++
T Consensus 37 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~ 116 (250)
T PRK07774 37 DINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSV 116 (250)
T ss_pred eCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhh
Confidence 67777888888888766667889999999999999999999999999999999999754 356678889999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.++++++|.|.+.+ .++||++||..++. +...|+++|++++.+++.++.++. ..||+++.++
T Consensus 117 n~~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~---~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~ 184 (250)
T PRK07774 117 NLDGALVCTRAVYKHMAKRG--------GGAIVNQSSTAAWL---YSNFYGLAKVGLNGLTQQLARELG-GMNIRVNAIA 184 (250)
T ss_pred hhHHHHHHHHHHHHHHHHhC--------CcEEEEEecccccC---CccccHHHHHHHHHHHHHHHHHhC-ccCeEEEEEe
Confidence 99999999999999998766 68999999987653 456899999999999999999998 8899999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
||.+.|++..... ++.+........+..+..+|+|+++++++++++...+.+|+.+..|
T Consensus 185 pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~ 243 (250)
T PRK07774 185 PGPIDTEATRTVT-PKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVD 243 (250)
T ss_pred cCcccCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEEC
Confidence 9999988755433 3344445555667777889999999999999876667788766543
No 139
>PRK06182 short chain dehydrogenase; Validated
Probab=99.97 E-value=2.6e-28 Score=192.54 Aligned_cols=196 Identities=23% Similarity=0.197 Sum_probs=162.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++. +. .+.++.+|++|.++++.+++++.+.++++|++|||+|.....++.+.+.++++..+++|+.
T Consensus 34 ~r~~~~l~~~~----~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 107 (273)
T PRK06182 34 ARRVDKMEDLA----SL--GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLF 107 (273)
T ss_pred eCCHHHHHHHH----hC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhH
Confidence 57766665432 22 3778999999999999999999999999999999999887788889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.++|.|++++ .|+||++||..+..+.+....|+++|+++++++++++.|+. ++||++++|+||+
T Consensus 108 ~~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~-~~gi~v~~v~Pg~ 178 (273)
T PRK06182 108 GAARLTQLVLPHMRAQR--------SGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVA-PFGIDVVVIEPGG 178 (273)
T ss_pred HHHHHHHHHHHHHHhcC--------CCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhc-ccCCEEEEEecCC
Confidence 99999999999998876 68999999998888888888999999999999999999998 8999999999999
Q ss_pred ccCCCccCCC-------C---hH----HHHHhhhhhcCCCCCCCHHHHHHHHHHhccC---CCccccc
Q 027828 162 IKDTAGVSKL-------A---PE----EIRSKATDYMAAYKFGEKWDIAMAALYLASD---AAVHRDL 212 (218)
Q Consensus 162 v~t~~~~~~~-------~---~~----~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~---~~~~~~g 212 (218)
++|++..... . .. ...+.+....+.++..+|+++|++++++++. ...++.|
T Consensus 179 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g 246 (273)
T PRK06182 179 IKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTARRPKTRYAVG 246 (273)
T ss_pred cccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhCCCCCceeecC
Confidence 9998642110 0 00 1122334445677889999999999999974 3345444
No 140
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.96 E-value=5.4e-28 Score=189.00 Aligned_cols=205 Identities=24% Similarity=0.303 Sum_probs=173.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++. +.++.++.+|+.+.+++..+++++.++++++|++||++|...+.++.+.+.++|...+++|+.
T Consensus 33 ~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (257)
T PRK07074 33 DIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLE 110 (257)
T ss_pred eCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhH
Confidence 577788877777763 346889999999999999999999999999999999999877677788899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+.+++.+.+.+++ .++||++||..+... .+...|+.+|++++.++++++.|+. ++||+|++++||+
T Consensus 111 ~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~~~~~a~~~~-~~gi~v~~v~pg~ 180 (257)
T PRK07074 111 AAYLCVEAVLEGMLKRS--------RGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHYTKLLAVEYG-RFGIRANAVAPGT 180 (257)
T ss_pred HHHHHHHHHHHHHHHcC--------CeEEEEEcchhhcCC-CCCcccHHHHHHHHHHHHHHHHHHh-HhCeEEEEEEeCc
Confidence 99999999999998776 689999999876543 3567899999999999999999998 8999999999999
Q ss_pred ccCCCccCCCC-hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++...... .+.+........+..++..++|+++++++|+++...+++|+.+..|
T Consensus 181 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~ 238 (257)
T PRK07074 181 VKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVD 238 (257)
T ss_pred CCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeC
Confidence 99887543221 2233333344567788899999999999999988889999988765
No 141
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.96 E-value=7.1e-28 Score=188.16 Aligned_cols=209 Identities=20% Similarity=0.221 Sum_probs=171.7
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHhhhhhh
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
.+.+++..+.++..+.++.++.+|+++++++.++++++.+.++++|++|||+|... ..++.+.+.++|+..+++|+.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~ 116 (256)
T PRK12745 37 DEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRG 116 (256)
T ss_pred hhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchH
Confidence 34566677777666678999999999999999999999999999999999999753 3567788899999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.+++++.+.|.++..+. ....++||++||..+..+.+....|+.+|++++++++.++.|+. ++||+++.|+||++
T Consensus 117 ~~~l~~~~~~~~~~~~~~~--~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~i~pg~v 193 (256)
T PRK12745 117 PFFLTQAVAKRMLAQPEPE--ELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLA-EEGIGVYEVRPGLI 193 (256)
T ss_pred HHHHHHHHHHHHHhccCcC--CCCCcEEEEECChhhccCCCCCcccHHHHHHHHHHHHHHHHHHH-HhCCEEEEEecCCC
Confidence 9999999999998754210 00135799999999988888889999999999999999999998 88999999999999
Q ss_pred cCCCccCCCChHHHHHhhh-hhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKAT-DYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.|++..... ......+. ...|..++.+|+|+++++.+|+++...+++|..+..|
T Consensus 194 ~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~ 248 (256)
T PRK12745 194 KTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVD 248 (256)
T ss_pred cCccccccc--hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEEC
Confidence 987643321 12222222 2457778899999999999999988888999887665
No 142
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.96 E-value=6.3e-28 Score=187.21 Aligned_cols=200 Identities=27% Similarity=0.323 Sum_probs=168.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.++. ...++.+|+++.+++.++++. .+++|++|||+|.....++.+.+.++|++.+++|+.
T Consensus 40 ~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (245)
T PRK07060 40 ARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNAR 110 (245)
T ss_pred eCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 57776666555433 356789999999988887665 578999999999877777778899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.+.+.+++. .++||++||..+..+.+....|+.+|++++.+++.++.++. ++||++++++||+
T Consensus 111 ~~~~l~~~~~~~~~~~~~-------~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~-~~~i~v~~v~pg~ 182 (245)
T PRK07060 111 GAALVARHVARAMIAAGR-------GGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELG-PHGIRVNSVNPTV 182 (245)
T ss_pred HHHHHHHHHHHHHHHcCC-------CcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHHh-hhCeEEEEEeeCC
Confidence 999999999999876531 37999999999988888999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|+..............+....+.+++.+++|+++++++|+++...+++|+.+..|
T Consensus 183 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~ 239 (245)
T PRK07060 183 TLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVD 239 (245)
T ss_pred CCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeEC
Confidence 998875443333334444555677888999999999999999998899999988766
No 143
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.96 E-value=3.6e-28 Score=204.30 Aligned_cols=186 Identities=20% Similarity=0.205 Sum_probs=162.0
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCC
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ 101 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 101 (218)
..++.+|+++.++++++++.+.+.++++|++|||+|......+.+.+.++|+.++++|+.+++.+.+++.+.+..+.
T Consensus 258 ~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~--- 334 (450)
T PRK08261 258 GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD--- 334 (450)
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC---
Confidence 45789999999999999999999999999999999988878888999999999999999999999999999765444
Q ss_pred CCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHhhh
Q 027828 102 ASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKAT 181 (218)
Q Consensus 102 ~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~ 181 (218)
.++||++||..+..+.+.+..|+++|+++++|++.++.|+. ++||++|+|+||+++|++...... ...+...
T Consensus 335 -----~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~-~~gi~v~~v~PG~i~t~~~~~~~~--~~~~~~~ 406 (450)
T PRK08261 335 -----GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLA-ERGITINAVAPGFIETQMTAAIPF--ATREAGR 406 (450)
T ss_pred -----CCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeCcCcchhhhccch--hHHHHHh
Confidence 68999999999988889999999999999999999999998 899999999999999876543221 1122222
Q ss_pred hhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 182 DYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 182 ~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
...++.+...|+|+++++.||+++.+.++||+.|.+|
T Consensus 407 ~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~ 443 (450)
T PRK08261 407 RMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVC 443 (450)
T ss_pred hcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEEC
Confidence 3345677789999999999999999999999999876
No 144
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.96 E-value=7.8e-28 Score=190.00 Aligned_cols=193 Identities=24% Similarity=0.321 Sum_probs=164.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+.+ +.++..+++|+++.+++.++++.+.+.++++|++|||+|.....++.+.+.++|++.+++|+.
T Consensus 34 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 110 (275)
T PRK08263 34 ARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFF 110 (275)
T ss_pred ECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhH
Confidence 57777776655543 456888999999999999999999999999999999999888888889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.++|.|++++ .++||++||..+..+.+....|+++|++++.+++.++.|+. ++||+|+.++||+
T Consensus 111 ~~~~l~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~gi~v~~v~Pg~ 181 (275)
T PRK08263 111 GALWVTQAVLPYLREQR--------SGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVA-EFGIKVTLVEPGG 181 (275)
T ss_pred HHHHHHHHHHHHHHhcC--------CCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCcEEEEEecCC
Confidence 99999999999998876 68999999999999999999999999999999999999998 8999999999999
Q ss_pred ccCCCccCCCC-------hHHHHHhhhhhcCCCCC-CCHHHHHHHHHHhccCC
Q 027828 162 IKDTAGVSKLA-------PEEIRSKATDYMAAYKF-GEKWDIAMAALYLASDA 206 (218)
Q Consensus 162 v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~e~a~~~~~L~s~~ 206 (218)
+.|++...... .+..........+.+++ .+|+|+++++++|++..
T Consensus 182 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~ 234 (275)
T PRK08263 182 YSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE 234 (275)
T ss_pred ccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC
Confidence 99987632111 11222334444566667 89999999999999754
No 145
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.96 E-value=2.1e-27 Score=184.84 Aligned_cols=208 Identities=28% Similarity=0.319 Sum_probs=179.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.+++++..+++...+.++.++.+|+++.++++++++++..+++++|++||++|.....++.+.+.++++..++.|+
T Consensus 36 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 115 (251)
T PRK12826 36 VDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNL 115 (251)
T ss_pred EeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhh
Confidence 36888888888888877777789999999999999999999999999999999999988777788889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-cCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
.+++.+.+++.+.|.+++ .++||++||..+. .+.+.+..|+.+|++++.+++.++.++. +.|++++.++|
T Consensus 116 ~~~~~l~~~~~~~~~~~~--------~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~-~~~i~~~~i~p 186 (251)
T PRK12826 116 TGTFLLTQAALPALIRAG--------GGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELA-ARNITVNSVHP 186 (251)
T ss_pred HHHHHHHHHHHHHHHHcC--------CcEEEEEechHhhccCCCCccHHHHHHHHHHHHHHHHHHHHH-HcCeEEEEEee
Confidence 999999999999998876 6899999999988 7788889999999999999999999998 88999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|.+.|+....... ..+...+....|.+++.+++|+|+++.+|++....+++|+.+..|
T Consensus 187 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~ 244 (251)
T PRK12826 187 GGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVD 244 (251)
T ss_pred CCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEEC
Confidence 9999886443221 222233444567778899999999999999887778899887654
No 146
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.96 E-value=1.1e-27 Score=184.27 Aligned_cols=195 Identities=23% Similarity=0.272 Sum_probs=161.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++...++++. +.++.++.+|+++++++..+++. .+++|++|||+|.....++.+.+.+++++++++|+.
T Consensus 28 ~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 102 (230)
T PRK07041 28 SRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFW 102 (230)
T ss_pred eCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHH
Confidence 5777778777777753 56788999999999999888775 478999999999877777888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++ .+.+. + .++||++||..+..+.++...|+++|+++++++++++.|+. + |++++++||+
T Consensus 103 ~~~~l~~--~~~~~--~--------~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~--irv~~i~pg~ 167 (230)
T PRK07041 103 GAYRVAR--AARIA--P--------GGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA-P--VRVNTVSPGL 167 (230)
T ss_pred HHHHHHh--hhhhc--C--------CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhh-C--ceEEEEeecc
Confidence 9999999 33442 2 58999999999998999999999999999999999999997 5 9999999999
Q ss_pred ccCCCccCCCC--hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLA--PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++...... ............+.++..+|+|+|+++.+|+++ .+++|..+.+|
T Consensus 168 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~ 224 (230)
T PRK07041 168 VDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVD 224 (230)
T ss_pred cccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeC
Confidence 99987543211 122333444556777888999999999999974 57889887765
No 147
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.96 E-value=5.1e-27 Score=182.17 Aligned_cols=202 Identities=29% Similarity=0.341 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHH
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 85 (218)
+..+++.+++...+.++.++.+|+++.+++.++++++.+.++++|++||++|...+.++.+.+.+.+++.+++|+.+++.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 120 (248)
T PRK05557 41 AGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFN 120 (248)
T ss_pred hHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHH
Confidence 34667777776667788999999999999999999999999999999999998877777788999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCC
Q 027828 86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165 (218)
Q Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~ 165 (218)
+.+++.+.+.+.+ .++||++||..+..+.+....|+.+|++++.+++.++.++. +.|+++++++||++.|+
T Consensus 121 l~~~~~~~~~~~~--------~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~v~pg~~~~~ 191 (248)
T PRK05557 121 LTKAVARPMMKQR--------SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELA-SRGITVNAVAPGFIETD 191 (248)
T ss_pred HHHHHHHHHHhcC--------CeEEEEEcccccCcCCCCCchhHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCccCCc
Confidence 9999999998866 68999999998888888899999999999999999999998 88999999999999887
Q ss_pred CccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.... ............+.+++.+++++++++.+|+++...+++|+.+..|
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~ 242 (248)
T PRK05557 192 MTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVN 242 (248)
T ss_pred ccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEec
Confidence 64332 2333444455567777889999999999999888888999887654
No 148
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.96 E-value=3.1e-27 Score=183.92 Aligned_cols=198 Identities=24% Similarity=0.207 Sum_probs=160.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.++++++.+.+ +.++.++.+|+++.++++++++++.+.++++|++|||+|... ..++.+.+.++|++++++|+
T Consensus 31 ~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~ 107 (248)
T PRK10538 31 GRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNN 107 (248)
T ss_pred ECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhh
Confidence 57777777766554 457889999999999999999999999999999999999753 35677889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++.++|.|++.+ .++||++||..+..+.++...|+++|++++++++.++.|+. ++||++++|+||
T Consensus 108 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg 178 (248)
T PRK10538 108 KGLVYMTRAVLPGMVERN--------HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLH-GTAVRVTDIEPG 178 (248)
T ss_pred HHHHHHHHHHHHHHHhcC--------CcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhc-CCCcEEEEEeCC
Confidence 999999999999998876 68999999999888888899999999999999999999998 899999999999
Q ss_pred cccCCCccCC-C-ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccc
Q 027828 161 PIKDTAGVSK-L-APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIH 214 (218)
Q Consensus 161 ~v~t~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~ 214 (218)
.+.+++.... . ....... .......+.+|+|+|++++||++....+..++.
T Consensus 179 ~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~ 231 (248)
T PRK10538 179 LVGGTEFSNVRFKGDDGKAE---KTYQNTVALTPEDVSEAVWWVATLPAHVNINTL 231 (248)
T ss_pred eecccccchhhccCcHHHHH---hhccccCCCCHHHHHHHHHHHhcCCCcccchhh
Confidence 9986543321 1 1111111 111122356999999999999986655555443
No 149
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.96 E-value=3.3e-27 Score=182.06 Aligned_cols=185 Identities=23% Similarity=0.242 Sum_probs=158.8
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCC
Q 027828 23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA 102 (218)
Q Consensus 23 ~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 102 (218)
.++.+|+++.++++++++++.+.+ ++|++|||+|.....++.+.+.++|++.+++|+.+++.+.++++|.|++++
T Consensus 44 ~~~~~D~~~~~~~~~~~~~~~~~~-~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---- 118 (234)
T PRK07577 44 ELFACDLADIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE---- 118 (234)
T ss_pred eEEEeeCCCHHHHHHHHHHHHHhC-CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC----
Confidence 567899999999999999998876 689999999988777888889999999999999999999999999999876
Q ss_pred CCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCC-hHHHHHhhh
Q 027828 103 SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA-PEEIRSKAT 181 (218)
Q Consensus 103 ~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~ 181 (218)
.++||++||.. ..+.+....|+++|+++++++++++.|+. ++||++++|+||++.|++...... .........
T Consensus 119 ----~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~ 192 (234)
T PRK07577 119 ----QGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELA-EYGITVNAVAPGPIETELFRQTRPVGSEEEKRVL 192 (234)
T ss_pred ----CcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHHHHHHH-hhCcEEEEEecCcccCcccccccccchhHHHHHh
Confidence 68999999985 34667788999999999999999999998 889999999999999987543321 122233344
Q ss_pred hhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 182 DYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 182 ~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
...+.++..+|+|+|+.+++|+++...+++|+.+..|
T Consensus 193 ~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 229 (234)
T PRK07577 193 ASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVD 229 (234)
T ss_pred hcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEec
Confidence 4567777889999999999999988889999988765
No 150
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.96 E-value=2.2e-27 Score=187.25 Aligned_cols=182 Identities=18% Similarity=0.171 Sum_probs=159.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++. ++.++.||+++++++.++++.+.+.++++|++|||+|.....++.+.+.+++++++++|+.
T Consensus 36 ~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (273)
T PRK07825 36 DLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVY 111 (273)
T ss_pred ECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHH
Confidence 578888877766663 5778999999999999999999999999999999999887788888999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.++|.|.+++ .|+||++||..+..+.+++..|+++|+++.+++++++.|+. ++||+++.|+||+
T Consensus 112 g~~~~~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~-~~gi~v~~v~Pg~ 182 (273)
T PRK07825 112 GVILGSKLAAPRMVPRG--------RGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELR-GTGVHVSVVLPSF 182 (273)
T ss_pred HHHHHHHHHHHHHHhCC--------CCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCc
Confidence 99999999999999877 78999999999999999999999999999999999999998 9999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~ 207 (218)
+.|++...... .......+|+++|+.++.++....
T Consensus 183 v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 183 VNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred Ccchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCCC
Confidence 99876433210 011235689999999999987543
No 151
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.96 E-value=3.9e-27 Score=186.18 Aligned_cols=193 Identities=21% Similarity=0.190 Sum_probs=159.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++.+.+. .+.++.++.+|+++.+++.++++.+.+.++++|+||||+|.....++.+.+.++|++.+++|+.
T Consensus 35 ~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 111 (277)
T PRK06180 35 VRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVF 111 (277)
T ss_pred eCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhH
Confidence 5666666554332 2456888999999999999999999999999999999999877778889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.++++++|+|++++ .++||++||.++..+.+++..|+++|+++++++++++.|+. ++|+++++|+||+
T Consensus 112 g~~~l~~~~~~~~~~~~--------~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~i~Pg~ 182 (277)
T PRK06180 112 GAVAMTKAVLPGMRARR--------RGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVA-PFGIHVTAVEPGS 182 (277)
T ss_pred HHHHHHHHHHHHHhccC--------CCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhh-hhCcEEEEEecCC
Confidence 99999999999998876 68999999999999999999999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCC-----hHHHHH------hhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 162 IKDTAGVSKLA-----PEEIRS------KATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 162 v~t~~~~~~~~-----~~~~~~------~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
+.|++...... .+.... ......+..++.+|+++|+++++++...
T Consensus 183 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~ 238 (277)
T PRK06180 183 FRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD 238 (277)
T ss_pred cccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence 99875332111 111111 1111234456789999999999998754
No 152
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.96 E-value=1.5e-26 Score=179.49 Aligned_cols=205 Identities=27% Similarity=0.332 Sum_probs=175.0
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
++.+..+.+.+.+...+.++.++.+|+++.+++.++++++.+.++++|++||++|...+.++.+.+.++++..+++|+.+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 118 (249)
T PRK12825 39 SDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSG 118 (249)
T ss_pred CCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHH
Confidence 44555666777777667788999999999999999999999989999999999998777777888999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.+++.+.+.+.+.+ .+++|++||..+..+.+....|+.+|++++++++.++.++. ++|++++.++||.+
T Consensus 119 ~~~l~~~~~~~~~~~~--------~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~-~~~i~~~~i~pg~~ 189 (249)
T PRK12825 119 VFHLLRAVVPPMRKQR--------GGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA-EYGITVNMVAPGDI 189 (249)
T ss_pred HHHHHHHHHHHHHhcC--------CCEEEEECccccCCCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCc
Confidence 9999999999998876 68999999999988888899999999999999999999998 88999999999999
Q ss_pred cCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 163 KDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 163 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.|++....... ..... ....+.+++.+++|+++.+.+++++.....+|..+..|
T Consensus 190 ~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~ 243 (249)
T PRK12825 190 DTDMKEATIEE-AREAK-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVT 243 (249)
T ss_pred cCCccccccch-hHHhh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeC
Confidence 98875443322 11111 22456777889999999999999887788889887654
No 153
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.96 E-value=6.4e-27 Score=181.98 Aligned_cols=197 Identities=20% Similarity=0.255 Sum_probs=168.4
Q ss_pred CCCcHHHHHHHHHHHHhcC-CCeeEEEecCC--CHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHH
Q 027828 1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVR--KREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVI 76 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~-~~~~~~~~D~s--~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~ 76 (218)
++|+.++++++.+++.+.+ .++.++.+|++ +.+++.++++.+.+.++++|+||||||.... .++.+.+.+.|++.+
T Consensus 42 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (247)
T PRK08945 42 LGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVM 121 (247)
T ss_pred EeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHH
Confidence 3688888888888887654 46677778886 7899999999999999999999999997644 566788899999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 77 EIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 77 ~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
++|+.+++.+++++.+.|.+++ .++||++||..+..+.+.+..|+++|++++.+++.++.++. ..||++++
T Consensus 122 ~~n~~g~~~~~~~~~~~l~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~-~~~i~~~~ 192 (247)
T PRK08945 122 QVNVNATFMLTQALLPLLLKSP--------AASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQ-GTNLRVNC 192 (247)
T ss_pred HHccHHHHHHHHHHHHHHHhCC--------CCEEEEEccHhhcCCCCCCcccHHHHHHHHHHHHHHHHHhc-ccCEEEEE
Confidence 9999999999999999999876 68999999999988888999999999999999999999998 88999999
Q ss_pred eecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccc
Q 027828 157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLL 216 (218)
Q Consensus 157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~ 216 (218)
++||++.|++........ ...++.+|+|+++.+.|++++...+++|+.+.
T Consensus 193 v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 242 (247)
T PRK08945 193 INPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFD 242 (247)
T ss_pred EecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHHhCccccccCCeEEe
Confidence 999999987532221111 12356799999999999999999999998764
No 154
>PRK08324 short chain dehydrogenase; Validated
Probab=99.96 E-value=7.4e-27 Score=204.67 Aligned_cols=209 Identities=26% Similarity=0.287 Sum_probs=180.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++... .++.++.+|+++++++.++++.+.+.+|++|++|||+|.....++.+.+.++|+..+++|+
T Consensus 452 ~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~ 530 (681)
T PRK08324 452 ADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNA 530 (681)
T ss_pred EeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHh
Confidence 368888888888877654 5788999999999999999999999999999999999988888888999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.+.|++++. .|+||++||..+..+.++...|+++|++++.+++.++.|+. ++||+||.|+||
T Consensus 531 ~g~~~l~~~~~~~l~~~~~-------~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gIrvn~v~Pg 602 (681)
T PRK08324 531 TGHFLVAREAVRIMKAQGL-------GGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELG-PDGIRVNGVNPD 602 (681)
T ss_pred HHHHHHHHHHHHHHHhcCC-------CcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCc
Confidence 9999999999999998652 38999999999998889999999999999999999999998 899999999999
Q ss_pred cc--cCCCccCCC----------ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PI--KDTAGVSKL----------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+ .|+++.... ...++.+.+....++++..+++|+|+++++|+++....++|..+.+|
T Consensus 603 ~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vd 672 (681)
T PRK08324 603 AVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVD 672 (681)
T ss_pred eeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEEC
Confidence 99 666543221 12222234555677888999999999999999877788999888765
No 155
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.96 E-value=5.5e-27 Score=183.39 Aligned_cols=185 Identities=19% Similarity=0.166 Sum_probs=156.2
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCC-CCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED-LSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~-~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++...+ ++.++.||+++.+++.++++++.++++++|++|||+|........+ .+.++|+..+++|
T Consensus 32 ~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n 110 (257)
T PRK07024 32 VARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTN 110 (257)
T ss_pred EeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHh
Confidence 3678888888777775444 7889999999999999999999999999999999999765433333 6789999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|++++.++++++.|+. ++||+|++|+|
T Consensus 111 ~~g~~~l~~~~l~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~P 181 (257)
T PRK07024 111 YFGMVATFQPFIAPMRAAR--------RGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELR-PAGVRVVTIAP 181 (257)
T ss_pred cHHHHHHHHHHHHHHHhcC--------CCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEec
Confidence 9999999999999998876 68999999999999999999999999999999999999998 89999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~ 207 (218)
|++.|++..... .+.....+|+++++.++..+....
T Consensus 182 g~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 182 GYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIARGR 217 (257)
T ss_pred CCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhCCC
Confidence 999987533211 011123589999999998886544
No 156
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.96 E-value=3.3e-27 Score=183.88 Aligned_cols=192 Identities=15% Similarity=0.082 Sum_probs=157.9
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCC--cc--EEEeCCCCCCC-CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHH
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGK--LD--ILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~--ld--~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 93 (218)
+.+++++.+|+++.++++++++++.+.++. ++ ++|+|+|...+ .++.+.+.++|.+.+++|+.+++.+++.++|.
T Consensus 47 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (251)
T PRK06924 47 NSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKH 126 (251)
T ss_pred CCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHH
Confidence 567889999999999999999998877653 22 89999997543 67888999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhc-CCCCeEEeeeecCcccCCCccCCC-
Q 027828 94 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKL- 171 (218)
Q Consensus 94 ~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~-~~~gi~v~~v~pG~v~t~~~~~~~- 171 (218)
|++.+. .++||++||..+..+.+++..|+++|+|++++++.++.|++ .++||+|++|+||++.|++.....
T Consensus 127 ~~~~~~-------~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~ 199 (251)
T PRK06924 127 TKDWKV-------DKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRS 199 (251)
T ss_pred HhccCC-------CceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHh
Confidence 987531 47899999999988999999999999999999999999974 256899999999999988643210
Q ss_pred ---ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 172 ---APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 172 ---~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
......+.+....+.+++.+|+|+|+.+++|+++. .+++|..+.+|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~G~~~~v~ 248 (251)
T PRK06924 200 SSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-DFPNGEVIDID 248 (251)
T ss_pred cCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-cCCCCCEeehh
Confidence 01111223444556778899999999999999874 78999988765
No 157
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.96 E-value=2e-26 Score=178.63 Aligned_cols=207 Identities=30% Similarity=0.326 Sum_probs=178.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++...+.++.++.+|+++++++.++++++...++++|++||++|.....+..+.+.++++..++.|+
T Consensus 35 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 114 (246)
T PRK05653 35 YDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNL 114 (246)
T ss_pred EeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhh
Confidence 36888888888888887788899999999999999999999999899999999999987767777888999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.+.+.+.+ .++||++||..+..+.+....|+.+|++++.+++.++.++. +.|++++.++||
T Consensus 115 ~~~~~l~~~~~~~l~~~~--------~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~-~~~i~~~~i~pg 185 (246)
T PRK05653 115 TGTFNVVRAALPPMIKAR--------YGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELA-SRGITVNAVAPG 185 (246)
T ss_pred HHHHHHHHHHHHHHHhcC--------CcEEEEECcHHhccCCCCCcHhHhHHHHHHHHHHHHHHHHh-hcCeEEEEEEeC
Confidence 999999999999998765 68999999998888888889999999999999999999997 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+.++.... ......+......+.+++.+++|+++.+.+++++....++|..+.+|
T Consensus 186 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~ 241 (246)
T PRK05653 186 FIDTDMTEG--LPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVN 241 (246)
T ss_pred CcCCcchhh--hhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeC
Confidence 998875432 12223333444566677889999999999999887788888877654
No 158
>PRK06196 oxidoreductase; Provisional
Probab=99.96 E-value=8e-27 Score=187.64 Aligned_cols=192 Identities=18% Similarity=0.159 Sum_probs=152.1
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++. ++.++.+|++|.++++++++++.+.++++|+||||||.... ..+.+.++|+..+++|+
T Consensus 56 ~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~ 129 (315)
T PRK06196 56 PARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMAC--PETRVGDGWEAQFATNH 129 (315)
T ss_pred EeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCC--CCccCCccHHHHHHHhh
Confidence 3688888887777663 37789999999999999999999999999999999997542 23456788999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc------------CCcchhHhHHhHHHHHHHHHHHHhhhcC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGT 148 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------------~~~~~~~y~~sK~a~~~~~~~la~el~~ 148 (218)
.+++.+++.++|.|.+++ .++||++||..+.. +++++..|+.+|+++..+++.++.++.
T Consensus 130 ~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~- 200 (315)
T PRK06196 130 LGHFALVNLLWPALAAGA--------GARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGK- 200 (315)
T ss_pred HHHHHHHHHHHHHHHhcC--------CCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 999999999999998875 68999999976532 345667899999999999999999998
Q ss_pred CCCeEEeeeecCcccCCCccCCCChHHHHH-hhh-hhcCCC-CCCCHHHHHHHHHHhccCCC
Q 027828 149 DYAIRVNGIAPGPIKDTAGVSKLAPEEIRS-KAT-DYMAAY-KFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 149 ~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~e~a~~~~~L~s~~~ 207 (218)
++||+|++|+||++.|++............ ... ...++. ++.+|+++|..++||++...
T Consensus 201 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 201 DQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQ 262 (315)
T ss_pred CCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCc
Confidence 889999999999999987543222111100 111 112222 46799999999999997533
No 159
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.96 E-value=2.8e-27 Score=182.66 Aligned_cols=176 Identities=18% Similarity=0.141 Sum_probs=147.1
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC------CCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHH
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF------LVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 93 (218)
.++.+++||+++.++++++ .++++++|++|||+|... ..++.+.+.+.|+..+++|+.+++.+++.++|.
T Consensus 43 ~~~~~~~~Dls~~~~~~~~----~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~ 118 (235)
T PRK09009 43 DNVQWHALDVTDEAEIKQL----SEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK 118 (235)
T ss_pred CceEEEEecCCCHHHHHHH----HHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence 4677899999999998875 445689999999999764 245678888999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEeccccccc---CCcchhHhHHhHHHHHHHHHHHHhhhcCC--CCeEEeeeecCcccCCCcc
Q 027828 94 LKKGGRGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSITRSLALEWGTD--YAIRVNGIAPGPIKDTAGV 168 (218)
Q Consensus 94 ~~~~~~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~sK~a~~~~~~~la~el~~~--~gi~v~~v~pG~v~t~~~~ 168 (218)
|++.+ .++++++||..+.. +.+++..|+++|+++++|+++|+.|+. + .||+|++|+||+++|++..
T Consensus 119 ~~~~~--------~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~~~~i~v~~v~PG~v~t~~~~ 189 (235)
T PRK09009 119 LKQSE--------SAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQ-RSLKHGVVLALHPGTTDTALSK 189 (235)
T ss_pred ccccC--------CceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhh-cccCCeEEEEEcccceecCCCc
Confidence 98765 57899999865532 346678999999999999999999997 5 6999999999999998753
Q ss_pred CCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 169 SKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
. .....|.+++.+|+|+|+.+++|+++.+.+++|+.+..|
T Consensus 190 ~----------~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~ 229 (235)
T PRK09009 190 P----------FQQNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYD 229 (235)
T ss_pred c----------hhhccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeC
Confidence 2 112345566789999999999999998889999988665
No 160
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.96 E-value=2.1e-26 Score=177.88 Aligned_cols=202 Identities=30% Similarity=0.350 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHH
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 85 (218)
+.+++..+.+...+.++.++.+|+++.++++++++.+.+.++++|++||++|.....++.+.+.+++++.+++|+.+++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 113 (239)
T TIGR01830 34 EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFN 113 (239)
T ss_pred hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHH
Confidence 55667777777777789999999999999999999999999999999999998766667788889999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCC
Q 027828 86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165 (218)
Q Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~ 165 (218)
+.+.+.+.+.+.+ .+++|++||..+..+.+.+..|+++|++++.+++.++.++. ..|++++.++||++.|+
T Consensus 114 l~~~~~~~~~~~~--------~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~~l~~~~~-~~g~~~~~i~pg~~~~~ 184 (239)
T TIGR01830 114 LTQAVLRIMIKQR--------SGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELA-SRNITVNAVAPGFIDTD 184 (239)
T ss_pred HHHHHHHHHHhcC--------CeEEEEECCccccCCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEEECCCCCh
Confidence 9999999998765 68999999999888889999999999999999999999998 88999999999999876
Q ss_pred CccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 166 AGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
..... +......+....+..++.+++|+++.+++++.+...+++|..+..|
T Consensus 185 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~ 235 (239)
T TIGR01830 185 MTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVD 235 (239)
T ss_pred hhhhc--ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeC
Confidence 54322 2233334445566778899999999999999887778899876554
No 161
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.96 E-value=8.1e-27 Score=185.70 Aligned_cols=185 Identities=18% Similarity=0.200 Sum_probs=156.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC--CHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~--~~~~~~~~~~~ 78 (218)
++|+.++++++.+++...+.++.++.+|++|.+++.++++.+.+.++++|++|||||.....++.+. ++++++..+++
T Consensus 70 ~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~v 149 (293)
T PRK05866 70 VARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVL 149 (293)
T ss_pred EECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHH
Confidence 3688899999999888777788899999999999999999999999999999999998766555543 46789999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v 157 (218)
|+.+++.++++++|.|++++ .|+||++||.++.. +.+....|+++|+|+++++++++.|+. ++||+|++|
T Consensus 150 N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~-~~gI~v~~v 220 (293)
T PRK05866 150 NYYAPLRLIRGLAPGMLERG--------DGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWG-DRGVHSTTL 220 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcC--------CcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEE
Confidence 99999999999999998876 68999999987654 367788999999999999999999998 899999999
Q ss_pred ecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 158 APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+||++.|++...... . . . ....+|+++|+.++..+..
T Consensus 221 ~pg~v~T~~~~~~~~-------~-~--~-~~~~~pe~vA~~~~~~~~~ 257 (293)
T PRK05866 221 YYPLVATPMIAPTKA-------Y-D--G-LPALTADEAAEWMVTAART 257 (293)
T ss_pred EcCcccCcccccccc-------c-c--C-CCCCCHHHHHHHHHHHHhc
Confidence 999999987542110 0 0 0 1235899999999888754
No 162
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.95 E-value=1.4e-26 Score=186.12 Aligned_cols=205 Identities=15% Similarity=0.102 Sum_probs=155.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++...+.++.++.+|+++.++++++++++.+.++++|++|||||+..+ .+..+.+.++|+.++++|
T Consensus 34 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN 113 (314)
T TIGR01289 34 ACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTN 113 (314)
T ss_pred EeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhh
Confidence 3688888888888886556678889999999999999999999888999999999997543 234567889999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC---------------------------------Ccchh
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA---------------------------------TWYQI 126 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~---------------------------------~~~~~ 126 (218)
+.+++.+++.++|.|++.+.+ .|+||++||..+... +.++.
T Consensus 114 ~~~~~~l~~~~l~~m~~~~~~------~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (314)
T TIGR01289 114 HLGHFLLCNLLLDDLKNSPNK------DKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAK 187 (314)
T ss_pred hhHHHHHHHHHHHHHHhCCCC------CCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhh
Confidence 999999999999999875310 379999999876421 13457
Q ss_pred HhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc-cCCCccCCCChH-HHHHhhhhhcCCCCCCCHHHHHHHHHHhcc
Q 027828 127 HVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI-KDTAGVSKLAPE-EIRSKATDYMAAYKFGEKWDIAMAALYLAS 204 (218)
Q Consensus 127 ~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v-~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s 204 (218)
.|++||+|+..+++.+++++..+.||+|++|+||++ .|++........ .....+.. .....+.+|++.|+.+++++.
T Consensus 188 ~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~l~~~~~ 266 (314)
T TIGR01289 188 AYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFPPFQK-YITKGYVSEEEAGERLAQVVS 266 (314)
T ss_pred hHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHHHHHH-HHhccccchhhhhhhhHHhhc
Confidence 899999999999999999984246999999999999 577654322111 11111111 112335689999999999886
Q ss_pred CCCccccc
Q 027828 205 DAAVHRDL 212 (218)
Q Consensus 205 ~~~~~~~g 212 (218)
+.....+|
T Consensus 267 ~~~~~~~g 274 (314)
T TIGR01289 267 DPKLKKSG 274 (314)
T ss_pred CcccCCCc
Confidence 53332344
No 163
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.95 E-value=9.1e-27 Score=187.30 Aligned_cols=181 Identities=18% Similarity=0.154 Sum_probs=146.6
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCCC--CCCCCCCHHHHHH
Q 027828 1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNFL--VPAEDLSPNGFRT 74 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~--~ld~li~~ag~~~~--~~~~~~~~~~~~~ 74 (218)
++|+.++++++.+++.+. +.++..+.+|+++ ++.+.++.+.+.++ ++|++|||||...+ ..+.+.+.+++++
T Consensus 83 ~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~ 160 (320)
T PLN02780 83 VARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKN 160 (320)
T ss_pred EECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHH
Confidence 479999999999998764 3467889999995 23344444555444 46699999997643 4678889999999
Q ss_pred HHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc--CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCe
Q 027828 75 VIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT--ATWYQIHVSAAKAAVDSITRSLALEWGTDYAI 152 (218)
Q Consensus 75 ~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi 152 (218)
.+++|+.+++.++++++|.|++++ .|+||++||..+.. +.|....|+++|+|+++|+++|+.|+. ++||
T Consensus 161 ~~~vN~~g~~~l~~~~lp~m~~~~--------~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~-~~gI 231 (320)
T PLN02780 161 LIKVNVEGTTKVTQAVLPGMLKRK--------KGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYK-KSGI 231 (320)
T ss_pred HHHHhHHHHHHHHHHHHHHHHhcC--------CcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHh-ccCe
Confidence 999999999999999999999876 79999999998864 357889999999999999999999998 9999
Q ss_pred EEeeeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 153 RVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 153 ~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+|++|+||++.|++..... ... ...+|+++|+.++..+..
T Consensus 232 ~V~~v~PG~v~T~~~~~~~------------~~~-~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 232 DVQCQVPLYVATKMASIRR------------SSF-LVPSSDGYARAALRWVGY 271 (320)
T ss_pred EEEEEeeCceecCcccccC------------CCC-CCCCHHHHHHHHHHHhCC
Confidence 9999999999998744210 000 135889999988887753
No 164
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.95 E-value=2.7e-26 Score=178.76 Aligned_cols=200 Identities=26% Similarity=0.277 Sum_probs=162.4
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
+.+.++...+.+.+.+.++..+.+|+++++++.++++++.+.++++|++|||+|.....++.+.+.+.++..+++|+.++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 119 (252)
T PRK06077 40 RAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSV 119 (252)
T ss_pred ChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHH
Confidence 44556666666776677788999999999999999999999999999999999987777788888999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 84 FIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
+.+++++.|.+.+ .++||++||..++.+.+++..|+++|++++++++.++.|+. + +|+++.+.||+++
T Consensus 120 ~~~~~~~~~~~~~----------~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~-~i~v~~v~Pg~i~ 187 (252)
T PRK06077 120 IYCSQELAKEMRE----------GGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELA-P-KIRVNAIAPGFVK 187 (252)
T ss_pred HHHHHHHHHHhhc----------CcEEEEEcchhccCCCCCchHHHHHHHHHHHHHHHHHHHHh-c-CCEEEEEeeCCcc
Confidence 9999999999865 47899999999999999999999999999999999999997 7 9999999999999
Q ss_pred CCCccCCCCh-HH-HHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCcccccccccc
Q 027828 164 DTAGVSKLAP-EE-IRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLD 217 (218)
Q Consensus 164 t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~ 217 (218)
|++....... .. .........+.+++.+|+|+|++++++++.. .++|..+..
T Consensus 188 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~--~~~g~~~~i 241 (252)
T PRK06077 188 TKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIE--SITGQVFVL 241 (252)
T ss_pred ChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCcc--ccCCCeEEe
Confidence 8864321110 00 0011112234557799999999999999632 345555443
No 165
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.95 E-value=1.2e-26 Score=183.38 Aligned_cols=190 Identities=20% Similarity=0.213 Sum_probs=153.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.++++++. +. .+.++.+|++|.++++.+++.+.+.+ +++|++|||||.....++.+.+.++++..+++|+
T Consensus 35 ~r~~~~~~~l~----~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~ 108 (277)
T PRK05993 35 CRKEEDVAALE----AE--GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANF 108 (277)
T ss_pred ECCHHHHHHHH----HC--CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHh
Confidence 56666665443 22 36788999999999999999997766 6899999999988878888999999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++.++|.|.+++ .|+||++||..+..+.++...|+++|+++++++++++.|+. ++||+|++|+||
T Consensus 109 ~g~~~~~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~-~~gi~v~~v~Pg 179 (277)
T PRK05993 109 FGWHDLTRRVIPVMRKQG--------QGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQ-GSGIHVSLIEPG 179 (277)
T ss_pred HHHHHHHHHHHHHHhhcC--------CCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhh-hhCCEEEEEecC
Confidence 999999999999999876 68999999999998889999999999999999999999998 999999999999
Q ss_pred cccCCCccCCCCh-------------HHHHH---hhhhh-cCCCCCCCHHHHHHHHHHhccCC
Q 027828 161 PIKDTAGVSKLAP-------------EEIRS---KATDY-MAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 161 ~v~t~~~~~~~~~-------------~~~~~---~~~~~-~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
++.|++....... +.+.. ..... .+.....+|+++|+.++..+..+
T Consensus 180 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~ 242 (277)
T PRK05993 180 PIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAP 242 (277)
T ss_pred CccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCC
Confidence 9999875432100 00100 01111 11122468999999999888643
No 166
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.95 E-value=2.8e-26 Score=168.67 Aligned_cols=167 Identities=22% Similarity=0.180 Sum_probs=138.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHH--hCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH--FGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~--~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~ 78 (218)
+|+.++..+-.+.......+++.+++|+++.+++..+++++.+- ..++|++|+|||+... ....+.+.+.|.+.+++
T Consensus 36 ~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~t 115 (249)
T KOG1611|consen 36 ARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYET 115 (249)
T ss_pred cCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhh
Confidence 57777752222222234679999999999999999999999987 4589999999997654 55566778899999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCC---CCCCCCCceEEEecccccccC---CcchhHhHHhHHHHHHHHHHHHhhhcCCCCe
Q 027828 79 DSVGTFIMCHEALKYLKKGGRG---QASSSSGGIIINISATLHYTA---TWYQIHVSAAKAAVDSITRSLALEWGTDYAI 152 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~iv~iss~~~~~~---~~~~~~y~~sK~a~~~~~~~la~el~~~~gi 152 (218)
|..++++++|+|+|++++...+ ...+..++.||++||.++-.+ ..++.+|.+||+|+++|+|+++.||. +.+|
T Consensus 116 N~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~-~~~i 194 (249)
T KOG1611|consen 116 NAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLK-DDHI 194 (249)
T ss_pred cchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhc-CCcE
Confidence 9999999999999999876432 244556789999999887643 34678999999999999999999999 9999
Q ss_pred EEeeeecCcccCCCccC
Q 027828 153 RVNGIAPGPIKDTAGVS 169 (218)
Q Consensus 153 ~v~~v~pG~v~t~~~~~ 169 (218)
-|..+|||||+|+|...
T Consensus 195 lv~sihPGwV~TDMgg~ 211 (249)
T KOG1611|consen 195 LVVSIHPGWVQTDMGGK 211 (249)
T ss_pred EEEEecCCeEEcCCCCC
Confidence 99999999999998764
No 167
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.95 E-value=6.4e-26 Score=176.91 Aligned_cols=209 Identities=30% Similarity=0.346 Sum_probs=173.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.+..+++.+++...+.++.++.+|+++.++++++++.+.+.++++|++||++|........+.+.++++.+++.|+
T Consensus 31 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~ 110 (255)
T TIGR01963 31 NDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIML 110 (255)
T ss_pred EeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHh
Confidence 36888888888888877677899999999999999999999999999999999999987766777888999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++.+.+.|++.+ .+++|++||..+..+.+.+..|+.+|++++.+++.++.++. ++||+++.++||
T Consensus 111 ~g~~~~~~~~~~~~~~~~--------~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~-~~~i~v~~i~pg 181 (255)
T TIGR01963 111 TSAFHTIRAALPHMKKQG--------WGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVA-AHGITVNAICPG 181 (255)
T ss_pred HHHHHHHHHHHHHHHhcC--------CeEEEEEcchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecC
Confidence 999999999999998766 68999999998888888999999999999999999999998 889999999999
Q ss_pred cccCCCccCCCC---------hH-HHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLA---------PE-EIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.+++...... .. .....+....+.+.+.+++|+|+++++++++....++|..+..|
T Consensus 182 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~ 249 (255)
T TIGR01963 182 YVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLD 249 (255)
T ss_pred ccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEc
Confidence 998875322110 01 11112222334456789999999999999876666788776654
No 168
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.95 E-value=3.5e-26 Score=179.11 Aligned_cols=189 Identities=25% Similarity=0.165 Sum_probs=159.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHH-hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~-~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.+.++++.+++. +.++.+++||+++.+++.++++.+.+. ++++|+||||||......+.+.+.++++.++++|+
T Consensus 32 ~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 109 (260)
T PRK08267 32 DINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINV 109 (260)
T ss_pred eCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHh
Confidence 578888887777654 467899999999999999999988776 78999999999988778888899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.+.|++++ .++||++||..+..+.+....|+.+|++++.++++++.++. ++||++++|+||
T Consensus 110 ~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~-~~~i~v~~i~pg 180 (260)
T PRK08267 110 KGVLNGAHAALPYLKATP--------GARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWR-RHGIRVADVMPL 180 (260)
T ss_pred HHHHHHHHHHHHHHHhCC--------CCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence 999999999999998876 68999999999998989999999999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
++.|++..... ........ . ......+|++++++++.++..
T Consensus 181 ~~~t~~~~~~~-~~~~~~~~-~--~~~~~~~~~~va~~~~~~~~~ 221 (260)
T PRK08267 181 FVDTAMLDGTS-NEVDAGST-K--RLGVRLTPEDVAEAVWAAVQH 221 (260)
T ss_pred CcCCccccccc-chhhhhhH-h--hccCCCCHHHHHHHHHHHHhC
Confidence 99988655311 11111111 1 112346899999999999953
No 169
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.95 E-value=3.9e-26 Score=176.67 Aligned_cols=188 Identities=23% Similarity=0.267 Sum_probs=163.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++...+.++.++.+|+++++++.++++++.++++++|++|||+|......+.+.++++|++.+++|+
T Consensus 37 ~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 116 (239)
T PRK07666 37 LARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNL 116 (239)
T ss_pred EeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHh
Confidence 36888888888888876677889999999999999999999999999999999999987767778889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.+.+.+++ .+++|++||..+..+.++...|+.+|+++..+++.++.|+. ++||+++.|+||
T Consensus 117 ~~~~~l~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~-~~gi~v~~v~pg 187 (239)
T PRK07666 117 MGVYYATRAVLPSMIERQ--------SGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVR-KHNIRVTALTPS 187 (239)
T ss_pred HHHHHHHHHHHHHHHhCC--------CcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecC
Confidence 999999999999998876 68999999999999989999999999999999999999998 899999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
++.|++....... ...+ ....+++++|+.+..+++..
T Consensus 188 ~v~t~~~~~~~~~--------~~~~-~~~~~~~~~a~~~~~~l~~~ 224 (239)
T PRK07666 188 TVATDMAVDLGLT--------DGNP-DKVMQPEDLAEFIVAQLKLN 224 (239)
T ss_pred cccCcchhhcccc--------ccCC-CCCCCHHHHHHHHHHHHhCC
Confidence 9998764322100 0111 24578999999999998753
No 170
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.95 E-value=7.2e-26 Score=178.73 Aligned_cols=195 Identities=19% Similarity=0.245 Sum_probs=163.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++...+.++.++.+|+++.+++.++++++.+.++++|++|||+|.....++.+.+.+.++..+++|+.
T Consensus 41 ~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~ 120 (274)
T PRK07775 41 ARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLV 120 (274)
T ss_pred eCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhH
Confidence 57777788887777777778889999999999999999999999999999999999877777788899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++++++.+++.+.+++ .++||++||..+..+.+....|+.+|++++.+++.++.++. ++||++++|+||+
T Consensus 121 ~~~~l~~~~l~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~-~~gi~v~~v~pG~ 191 (274)
T PRK07775 121 GANRLATAVLPGMIERR--------RGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELE-GTGVRASIVHPGP 191 (274)
T ss_pred HHHHHHHHHHHHHHhcC--------CceEEEECChHhcCCCCCcchHHHHHHHHHHHHHHHHHHhc-ccCeEEEEEeCCc
Confidence 99999999999998765 68999999999888888888999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCCh--HHHHHhhhh--hcCCCCCCCHHHHHHHHHHhccC
Q 027828 162 IKDTAGVSKLAP--EEIRSKATD--YMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 162 v~t~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+.|+........ ......... .....++..++|+|++++++++.
T Consensus 192 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~ 239 (274)
T PRK07775 192 TLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAET 239 (274)
T ss_pred ccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcC
Confidence 988754322111 111111111 12234578999999999999975
No 171
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.95 E-value=7.6e-26 Score=177.41 Aligned_cols=206 Identities=27% Similarity=0.338 Sum_probs=170.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC-CCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.+.++++.+++... ++.++.+|+++++++..+++++.+.++++|+|||++|.. ....+...+.++|+..+++|+
T Consensus 42 ~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~ 119 (264)
T PRK12829 42 DVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNL 119 (264)
T ss_pred eCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHh
Confidence 57777777766665432 678899999999999999999999999999999999987 556677888999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCC-ceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSG-GIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
.+++.+++.+.+.+...+ . ++|+++||..+..+.+.+..|+.+|++++.+++.++.++. ..++++++++|
T Consensus 120 ~~~~~~~~~~~~~~~~~~--------~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~-~~~i~~~~l~p 190 (264)
T PRK12829 120 NGQFYFARAAVPLLKASG--------HGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG-PLGIRVNAILP 190 (264)
T ss_pred HHHHHHHHHHHHHHHhCC--------CCeEEEEecccccccCCCCCchhHHHHHHHHHHHHHHHHHHh-hcCeEEEEEec
Confidence 999999999999888755 4 7799999988888888889999999999999999999998 88999999999
Q ss_pred CcccCCCccCCC---------ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKL---------APEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.|++..... .............+.+++.+++++++++.+++++....++|+.+..|
T Consensus 191 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~ 258 (264)
T PRK12829 191 GIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVD 258 (264)
T ss_pred CCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeC
Confidence 999987643221 11122233344456777899999999999999877777888877654
No 172
>PRK06194 hypothetical protein; Provisional
Probab=99.95 E-value=6.3e-26 Score=180.09 Aligned_cols=204 Identities=16% Similarity=0.131 Sum_probs=162.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+.+++..+++...+.++.++.+|++|.++++++++.+.+.++++|+||||||.....++.+.+.++|+..+++|+.
T Consensus 37 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~ 116 (287)
T PRK06194 37 DVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLW 116 (287)
T ss_pred eCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccH
Confidence 67788888888888776778889999999999999999999999999999999999887778888999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhc-CCCCeEEeeeecC
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPG 160 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~-~~~gi~v~~v~pG 160 (218)
+++.++++++|.|+++..+. ....|+||++||..+..+.++.+.|+++|++++.+++.++.|+. ...+|+++.++||
T Consensus 117 g~~~~~~~~~~~~~~~~~~~--~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg 194 (287)
T PRK06194 117 GVIHGVRAFTPLMLAAAEKD--PAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPY 194 (287)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeC
Confidence 99999999999999875210 00127999999999998888999999999999999999999986 1356999999999
Q ss_pred cccCCCccCCCC-hHH------------HHHhhhhhcCCCCCCCHHHHHHHHHHhccCCC
Q 027828 161 PIKDTAGVSKLA-PEE------------IRSKATDYMAAYKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 161 ~v~t~~~~~~~~-~~~------------~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~ 207 (218)
++.|++...... +.. ...............+++|+|+.++.++....
T Consensus 195 ~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~~~~ 254 (287)
T PRK06194 195 FVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIRAGR 254 (287)
T ss_pred cccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHHHcCC
Confidence 999887543211 100 00000111111113699999999999875443
No 173
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.95 E-value=5.2e-26 Score=178.46 Aligned_cols=188 Identities=18% Similarity=0.229 Sum_probs=160.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++ ..+.++.++.+|++|.+++..+++.+.+ ++++|++|||+|.....++.+.+.+++++.+++|+
T Consensus 35 ~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~ 112 (263)
T PRK09072 35 VGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MGGINVLINNAGVNHFALLEDQDPEAIERLLALNL 112 (263)
T ss_pred EECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhh
Confidence 368888888888887 4456889999999999999999999876 78999999999987777788889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++.+.|+|.+++ .++||++||..+..+.++...|+.+|+++.++++.++.|+. ++||+|+.++||
T Consensus 113 ~g~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~Pg 183 (263)
T PRK09072 113 TAPMQLTRALLPLLRAQP--------SAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELA-DTGVRVLYLAPR 183 (263)
T ss_pred HHHHHHHHHHHHHHHhcC--------CCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEecC
Confidence 999999999999998875 68999999999988889999999999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
+++|++..... ...... ...+..+|+++|+.+++++...
T Consensus 184 ~~~t~~~~~~~------~~~~~~-~~~~~~~~~~va~~i~~~~~~~ 222 (263)
T PRK09072 184 ATRTAMNSEAV------QALNRA-LGNAMDDPEDVAAAVLQAIEKE 222 (263)
T ss_pred cccccchhhhc------cccccc-ccCCCCCHHHHHHHHHHHHhCC
Confidence 99987543211 111111 1124679999999999999754
No 174
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.95 E-value=7.2e-26 Score=179.18 Aligned_cols=196 Identities=21% Similarity=0.219 Sum_probs=163.7
Q ss_pred CCcHHHHHHHHHHHHhcC--CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+|+.+.++++.+++...+ .++.++.+|++|+++++. ++++.+.++++|++|||+|...+..+.+.+.+++++.+++|
T Consensus 34 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n 112 (280)
T PRK06914 34 MRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETN 112 (280)
T ss_pred eCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHh
Confidence 688888888877776543 478899999999999999 89999999999999999998877778888999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+++.++|.|++.+ .++||++||..+..+.+++..|+.+|++++.++++++.|+. ++||+++.++|
T Consensus 113 ~~~~~~l~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~p 183 (280)
T PRK06914 113 VFGAISVTQAVLPYMRKQK--------SGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELK-PFGIDVALIEP 183 (280)
T ss_pred hHHHHHHHHHHHHHHHhcC--------CCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHHHHhh-hhCCEEEEEec
Confidence 9999999999999998766 68999999999888999999999999999999999999998 88999999999
Q ss_pred CcccCCCccCCCC-----------hHHHHHhhhh--hcCCCCCCCHHHHHHHHHHhccCCC
Q 027828 160 GPIKDTAGVSKLA-----------PEEIRSKATD--YMAAYKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 160 G~v~t~~~~~~~~-----------~~~~~~~~~~--~~~~~~~~~~~e~a~~~~~L~s~~~ 207 (218)
|+++|++...... .......... ..+..++.+|+|+|+++++++++..
T Consensus 184 g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~ 244 (280)
T PRK06914 184 GSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKR 244 (280)
T ss_pred CCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCC
Confidence 9999986542110 0011111111 1234567899999999999998653
No 175
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.95 E-value=7.6e-26 Score=177.45 Aligned_cols=194 Identities=25% Similarity=0.286 Sum_probs=163.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC-CHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL-SPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~-~~~~~~~~~~~n~ 80 (218)
+|+.++++++.+++...+.++.++.+|+++.+++..+++.+.++++++|++|||+|.....++.+. +.+++++.+++|+
T Consensus 32 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~ 111 (263)
T PRK06181 32 ARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNY 111 (263)
T ss_pred eCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhh
Confidence 678888888888887777788999999999999999999999999999999999998777777777 8999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+.+.+.+.|.+. .++||++||..+..+.+++..|+.+|++++.+++.++.++. ++|++++++.||
T Consensus 112 ~~~~~l~~~~~~~~~~~---------~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~~~~i~pg 181 (263)
T PRK06181 112 LGAVYCTHAALPHLKAS---------RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELA-DDGVAVTVVCPG 181 (263)
T ss_pred HHHHHHHHHHHHHHHhc---------CCEEEEEecccccCCCCCccHHHHHHHHHHHHHHHHHHHhh-hcCceEEEEecC
Confidence 99999999999998764 48899999999988888999999999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
++.|++.......... ..........++.+|+|+|+++.++++..
T Consensus 182 ~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 182 FVATDIRKRALDGDGK-PLGKSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred ccccCcchhhcccccc-ccccccccccCCCCHHHHHHHHHHHhhCC
Confidence 9998865432211100 00001111235789999999999999753
No 176
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.95 E-value=2.8e-26 Score=179.04 Aligned_cols=182 Identities=16% Similarity=0.127 Sum_probs=150.7
Q ss_pred CCcHHH-HHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTV-LRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~-l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+|+.+. ++++.+++...+. +++++.+|++|.+++.++++++.+ ++++|++|+|+|...+..-...+.+++.+.+++|
T Consensus 40 ~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN 118 (253)
T PRK07904 40 ALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEIN 118 (253)
T ss_pred eCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHH
Confidence 577776 8888888877654 788999999999999999999886 5899999999997643221122345566789999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+++.++|.|++++ .++||++||..+..+.++...|+++|+++.+|++.++.|+. ++||+|+.|+|
T Consensus 119 ~~~~~~l~~~l~~~~~~~~--------~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~-~~~i~v~~v~P 189 (253)
T PRK07904 119 YTAAVSVGVLLGEKMRAQG--------FGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALR-EYGVRVLVVRP 189 (253)
T ss_pred hHhHHHHHHHHHHHHHhcC--------CceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHHh-hcCCEEEEEee
Confidence 9999999999999999876 68999999998877778888999999999999999999998 99999999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
|++.|++...... .....+|+++|+.++..+.+.
T Consensus 190 g~v~t~~~~~~~~-------------~~~~~~~~~~A~~i~~~~~~~ 223 (253)
T PRK07904 190 GQVRTRMSAHAKE-------------APLTVDKEDVAKLAVTAVAKG 223 (253)
T ss_pred CceecchhccCCC-------------CCCCCCHHHHHHHHHHHHHcC
Confidence 9999876432110 012458999999999998654
No 177
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.95 E-value=3.2e-26 Score=180.28 Aligned_cols=177 Identities=26% Similarity=0.294 Sum_probs=151.0
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.+++||++|+++++++++.+.+.++++|+||||+|.....++.+.+.++++..+++|+.+++.++++++|.|++++
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-- 123 (270)
T PRK06179 46 GVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-- 123 (270)
T ss_pred CCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--
Confidence 467899999999999999999999999999999999988778888899999999999999999999999999999877
Q ss_pred CCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChH----HH
Q 027828 101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPE----EI 176 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~----~~ 176 (218)
.++||++||..+..+.+....|+++|++++.+++.++.|+. ++||+++.|+||++.|++........ ..
T Consensus 124 ------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~-~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~ 196 (270)
T PRK06179 124 ------SGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVR-QFGIRVSLVEPAYTKTNFDANAPEPDSPLAEY 196 (270)
T ss_pred ------CceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEeCCCcccccccccCCCCCcchhh
Confidence 78999999999999999999999999999999999999998 89999999999999998754332110 00
Q ss_pred ---HHhhhh--hcCCCCCCCHHHHHHHHHHhccCC
Q 027828 177 ---RSKATD--YMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 177 ---~~~~~~--~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
...... ..+..+..+|+++|+.++.+++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~ 231 (270)
T PRK06179 197 DRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP 231 (270)
T ss_pred HHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence 000111 123445679999999999998754
No 178
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.95 E-value=1.8e-26 Score=177.89 Aligned_cols=151 Identities=26% Similarity=0.286 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCC-CCCCCCCCCHHHHHHHHhhhhhh
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~--~ld~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
+..+.+..+.. ..+..+++.|++++++++++.+.+++..+ ++-+||||||+. ...+.+..+.+++++++++|+.|
T Consensus 64 ~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG 141 (322)
T KOG1610|consen 64 EGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLG 141 (322)
T ss_pred chHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhh
Confidence 33444444443 45788999999999999999999999764 699999999965 44788889999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
++.++++|+|.++++ +||||+|||..+..+.|..+.|++||+|++.|+-+|++|+. ++||+|..|.||.+
T Consensus 142 ~irvT~~~lpLlr~a---------rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~-~fGV~VsiiePG~f 211 (322)
T KOG1610|consen 142 TIRVTKAFLPLLRRA---------RGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRRELR-PFGVKVSIIEPGFF 211 (322)
T ss_pred HHHHHHHHHHHHHhc---------cCeEEEecccccCccCcccccchhhHHHHHHHHHHHHHHHH-hcCcEEEEeccCcc
Confidence 999999999999987 69999999999999999999999999999999999999998 99999999999999
Q ss_pred cCCCcc
Q 027828 163 KDTAGV 168 (218)
Q Consensus 163 ~t~~~~ 168 (218)
.|+...
T Consensus 212 ~T~l~~ 217 (322)
T KOG1610|consen 212 KTNLAN 217 (322)
T ss_pred ccccCC
Confidence 988765
No 179
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.95 E-value=1.6e-25 Score=168.75 Aligned_cols=163 Identities=17% Similarity=0.230 Sum_probs=138.8
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCC
Q 027828 24 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 103 (218)
Q Consensus 24 ~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 103 (218)
.++||+++.+++++++++ ++++|++|||+|.....++.+.+.++|++.+++|+.+++++++++.|+|.+
T Consensus 35 ~~~~D~~~~~~~~~~~~~----~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------- 103 (199)
T PRK07578 35 DVQVDITDPASIRALFEK----VGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND------- 103 (199)
T ss_pred ceEecCCChHHHHHHHHh----cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------
Confidence 468999999999988765 478999999999877778888999999999999999999999999999975
Q ss_pred CCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHhhhhh
Q 027828 104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDY 183 (218)
Q Consensus 104 ~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~ 183 (218)
.++|+++||..+..+.+.+..|+++|+++++|++.++.|+ ++||+|++|+||++.|++... ...
T Consensus 104 ---~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~--~~gi~v~~i~Pg~v~t~~~~~-----------~~~ 167 (199)
T PRK07578 104 ---GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL--PRGIRINVVSPTVLTESLEKY-----------GPF 167 (199)
T ss_pred ---CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc--cCCeEEEEEcCCcccCchhhh-----------hhc
Confidence 5789999999998888999999999999999999999998 569999999999998864211 111
Q ss_pred cCCCCCCCHHHHHHHHHHhccCCCccccccccc
Q 027828 184 MAAYKFGEKWDIAMAALYLASDAAVHRDLIHLL 216 (218)
Q Consensus 184 ~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~ 216 (218)
.+..+..+|+|+|+.+.++++. .++|+.+.
T Consensus 168 ~~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~ 197 (199)
T PRK07578 168 FPGFEPVPAARVALAYVRSVEG---AQTGEVYK 197 (199)
T ss_pred CCCCCCCCHHHHHHHHHHHhcc---ceeeEEec
Confidence 2333467999999999999963 57887664
No 180
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=2.2e-26 Score=166.72 Aligned_cols=152 Identities=22% Similarity=0.180 Sum_probs=139.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC--CCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~--~~~~~~~~~~~~~ 78 (218)
|||++++|+++.++. ..++.+.||+.|.++++++++++++.++.++++|||||+...-.+. +...++.+..+.+
T Consensus 35 ~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~ 110 (245)
T COG3967 35 CGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIAT 110 (245)
T ss_pred ecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHH
Confidence 689999999887765 5688999999999999999999999999999999999988765443 4456778899999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.++++++|+++++. .+.||+|||..+..+....+.||++|+|+.+++.+|+.++. ..+|+|..+.
T Consensus 111 Nl~API~Lt~~~lphl~~q~--------~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk-~t~veVIE~~ 181 (245)
T COG3967 111 NLLAPIRLTALLLPHLLRQP--------EATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLK-DTSVEVIELA 181 (245)
T ss_pred hhhhHHHHHHHHHHHHHhCC--------CceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHhh-hcceEEEEec
Confidence 99999999999999999997 79999999999999999999999999999999999999998 8899999999
Q ss_pred cCcccCC
Q 027828 159 PGPIKDT 165 (218)
Q Consensus 159 pG~v~t~ 165 (218)
|-.|+|+
T Consensus 182 PP~V~t~ 188 (245)
T COG3967 182 PPLVDTT 188 (245)
T ss_pred CCceecC
Confidence 9999997
No 181
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.94 E-value=2.2e-25 Score=172.13 Aligned_cols=196 Identities=26% Similarity=0.236 Sum_probs=166.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++..+..+++... .+..+.+|++|.+++.++++.+.+.++++|++||++|...+.++.+.+.+++++.+++|+.
T Consensus 38 ~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 115 (239)
T PRK12828 38 GRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVK 115 (239)
T ss_pred eCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhch
Confidence 57777766666666543 3566789999999999999999999999999999999876667778899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++++.+.+.+++ .++||++||..+..+.+.+..|+.+|++++.+++.++.++. ++||+++.++||+
T Consensus 116 ~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~-~~~i~~~~i~pg~ 186 (239)
T PRK12828 116 TTLNASKAALPALTASG--------GGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELL-DRGITVNAVLPSI 186 (239)
T ss_pred hHHHHHHHHHHHHHhcC--------CCEEEEECchHhccCCCCcchhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEecCc
Confidence 99999999999998766 68999999999988888899999999999999999999997 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.++......... ....+.+++|+++++.+++++...+++|..+.+|
T Consensus 187 v~~~~~~~~~~~~----------~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~ 233 (239)
T PRK12828 187 IDTPPNRADMPDA----------DFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVD 233 (239)
T ss_pred ccCcchhhcCCch----------hhhcCCCHHHHHHHHHHHhCcccccccceEEEec
Confidence 9987432221111 1233678999999999999987778899888765
No 182
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.94 E-value=5.4e-25 Score=171.13 Aligned_cols=183 Identities=20% Similarity=0.177 Sum_probs=158.5
Q ss_pred CCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+|+.++++++.+++.+. +.++.++++|+++++++.++++++.++++++|++|||+|+....++.+.+.+.+++.+++|
T Consensus 33 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 112 (248)
T PRK08251 33 ARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETN 112 (248)
T ss_pred eCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHH
Confidence 68888888888877654 5678899999999999999999999999999999999998877777888899999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcc-hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
+.+++.+++++.|.+++.+ .++||++||..+..+.+. ...|+.+|++++.+++.++.++. ..||++++|+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~~i~v~~v~ 183 (248)
T PRK08251 113 FVAALAQCEAAMEIFREQG--------SGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELA-KTPIKVSTIE 183 (248)
T ss_pred hHHHHHHHHHHHHHHHhcC--------CCeEEEEeccccccCCCCCcccHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEe
Confidence 9999999999999998876 689999999988887774 68899999999999999999998 8899999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
||+++|++...... .....++++.++.++..+..+
T Consensus 184 pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~~ 218 (248)
T PRK08251 184 PGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEKE 218 (248)
T ss_pred cCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhcC
Confidence 99999876433211 112468999999998887643
No 183
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.94 E-value=3.3e-25 Score=178.04 Aligned_cols=195 Identities=17% Similarity=0.140 Sum_probs=151.9
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
++|+.++++++.+++.+. +.++.++.||+++.++++++++++.+.++++|+||||||.... +..+.+.++|+..+++
T Consensus 44 ~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~-~~~~~t~~~~e~~~~v 122 (313)
T PRK05854 44 PVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP-PERQTTADGFELQFGT 122 (313)
T ss_pred EeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccC-CccccCcccHHHHhhh
Confidence 379999999999988764 3468899999999999999999999999999999999997653 3345678899999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC------------CcchhHhHHhHHHHHHHHHHHHhhh
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEW 146 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------------~~~~~~y~~sK~a~~~~~~~la~el 146 (218)
|+.+++.+++.++|.|++. .++||++||..+..+ ++++..|+.||+|+..|++.|+.++
T Consensus 123 N~~g~~~l~~~llp~l~~~---------~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~ 193 (313)
T PRK05854 123 NHLGHFALTAHLLPLLRAG---------RARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRS 193 (313)
T ss_pred hhHHHHHHHHHHHHHHHhC---------CCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999764 478999999876543 3567789999999999999999864
Q ss_pred c-CCCCeEEeeeecCcccCCCccCCCC----hHHHHHhhhhhc-CCC-CCCCHHHHHHHHHHhccC
Q 027828 147 G-TDYAIRVNGIAPGPIKDTAGVSKLA----PEEIRSKATDYM-AAY-KFGEKWDIAMAALYLASD 205 (218)
Q Consensus 147 ~-~~~gi~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~-~~~-~~~~~~e~a~~~~~L~s~ 205 (218)
. ..+||+||+++||++.|++...... ...+...+.... ... ...++++.+...++++.+
T Consensus 194 ~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~ 259 (313)
T PRK05854 194 RAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATS 259 (313)
T ss_pred hcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeC
Confidence 2 1578999999999999987543211 111111111111 011 245888999999988753
No 184
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.94 E-value=6.3e-26 Score=176.40 Aligned_cols=195 Identities=18% Similarity=0.141 Sum_probs=153.4
Q ss_pred CCcH-HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRK-TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~-~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+. +.++++.+++...+.++.++.+|+++++++.++++++.+.++++|++|||+|...... ..+...+++|+
T Consensus 37 ~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~------~~~~~~~~vn~ 110 (248)
T PRK07806 37 YRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGMESG------MDEDYAMRLNR 110 (248)
T ss_pred eCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCCCC------CCcceeeEeee
Confidence 4554 4567777777766778889999999999999999999999999999999998643211 12457889999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----cCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-----TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-----~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
.+++++++++.|.|.+ .++||++||..+. .+.+.+..|+.+|++++.+++.++.|++ ++||+|+
T Consensus 111 ~~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~-~~~i~v~ 179 (248)
T PRK07806 111 DAQRNLARAALPLMPA----------GSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELA-EKGIGFV 179 (248)
T ss_pred HHHHHHHHHHHhhccC----------CceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhh-ccCeEEE
Confidence 9999999999998853 4789999996543 2335567899999999999999999998 8999999
Q ss_pred eeecCcccCCCccCC---CChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 156 GIAPGPIKDTAGVSK---LAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 156 ~v~pG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|.||++.|++.... ..+... . ....|.+++.+|+|+|+++.+|++ +.+++|+.+..|
T Consensus 180 ~v~pg~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~dva~~~~~l~~--~~~~~g~~~~i~ 240 (248)
T PRK07806 180 VVSGDMIEGTVTATLLNRLNPGAI-E--ARREAAGKLYTVSEFAAEVARAVT--APVPSGHIEYVG 240 (248)
T ss_pred EeCCccccCchhhhhhccCCHHHH-H--HHHhhhcccCCHHHHHHHHHHHhh--ccccCccEEEec
Confidence 999999987653321 111111 1 224567889999999999999997 457788877654
No 185
>PRK09135 pteridine reductase; Provisional
Probab=99.94 E-value=1.6e-24 Score=168.39 Aligned_cols=204 Identities=27% Similarity=0.310 Sum_probs=167.0
Q ss_pred CC-cHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GR-RKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R-~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+| +.+.++.+.+.+... +..+.++.+|+++.+++.++++.+.+.++++|+|||++|...+.++.+.+.++++..+++|
T Consensus 37 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 116 (249)
T PRK09135 37 YHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASN 116 (249)
T ss_pred cCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHh
Confidence 34 345567776666654 3467889999999999999999999999999999999998777777788889999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+++.+.+++.|.+.+. .+.++++++..+..+.++...|+.+|++++.+++.++.++. + ++++++++|
T Consensus 117 ~~g~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~-~i~~~~v~p 185 (249)
T PRK09135 117 LKAPFFLSQAAAPQLRKQ---------RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELA-P-EVRVNAVAP 185 (249)
T ss_pred chhHHHHHHHHHHHHhhC---------CeEEEEEeChhhcCCCCCchhHHHHHHHHHHHHHHHHHHHC-C-CCeEEEEEe
Confidence 999999999999988765 47899988887777888899999999999999999999986 5 799999999
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|++.|+....... ...........+..+..+++|+++++.+++.+ ....+|+.+..|
T Consensus 186 g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~~~i~ 242 (249)
T PRK09135 186 GAILWPEDGNSFD-EEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQILAVD 242 (249)
T ss_pred ccccCccccccCC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcEEEEC
Confidence 9999987543332 33333444555667778999999999999874 456788776553
No 186
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.94 E-value=1.5e-26 Score=170.15 Aligned_cols=185 Identities=23% Similarity=0.258 Sum_probs=146.5
Q ss_pred HHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 10 SAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 10 ~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
+...+|++. ..++.+++||+++..++++.++++..+||.+|++||+||+.. ..+|++.+++|+.|.++-+
T Consensus 43 ~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~--------dkd~e~Ti~vNLtgvin~T 114 (261)
T KOG4169|consen 43 EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD--------DKDWERTINVNLTGVINGT 114 (261)
T ss_pred HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc--------chhHHHhhccchhhhhhhh
Confidence 344556554 357889999999999999999999999999999999999865 4469999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhc-CCCCeEEeeeecCcccCCC
Q 027828 88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTA 166 (218)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~-~~~gi~v~~v~pG~v~t~~ 166 (218)
...+|+|.++..+. +|-||++||..+..|.|-.+.|+++|+++.+|+|+||.... .+.||++++++||++.|.+
T Consensus 115 ~~alpyMdk~~gG~-----GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l 189 (261)
T KOG4169|consen 115 QLALPYMDKKQGGK-----GGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDL 189 (261)
T ss_pred hhhhhhhhhhcCCC-----CcEEEEeccccccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHH
Confidence 99999998875433 79999999999999999999999999999999999998742 2679999999999999875
Q ss_pred ccCC---C---C-hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccc
Q 027828 167 GVSK---L---A-PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIH 214 (218)
Q Consensus 167 ~~~~---~---~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~ 214 (218)
.... . . .+...+.+. +.+ -..|.+++..++-.+.. ..||..
T Consensus 190 ~~~~~~~~~~~e~~~~~~~~l~-~~~---~q~~~~~a~~~v~aiE~---~~NGai 237 (261)
T KOG4169|consen 190 AENIDASGGYLEYSDSIKEALE-RAP---KQSPACCAINIVNAIEY---PKNGAI 237 (261)
T ss_pred HHHHHhcCCcccccHHHHHHHH-Hcc---cCCHHHHHHHHHHHHhh---ccCCcE
Confidence 4332 1 1 122222222 222 34788888888877743 445543
No 187
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.94 E-value=5.7e-25 Score=170.58 Aligned_cols=186 Identities=19% Similarity=0.181 Sum_probs=150.9
Q ss_pred CCCeeEEEecCCCHHHHHHHHHH-HHHHh---CCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHH
Q 027828 19 GIPAIGLEGDVRKREDAVRVVES-TINHF---GKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~-~~~~~---~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 93 (218)
+.++.++.+|+++.+++++++++ +.+.+ +++|++|||+|.... .++.+.+.++|+..+++|+.+++.+++.+.+.
T Consensus 44 ~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 123 (243)
T PRK07023 44 GERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQA 123 (243)
T ss_pred CCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHH
Confidence 45788899999999999998777 55554 479999999997654 56778899999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCC--
Q 027828 94 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-- 171 (218)
Q Consensus 94 ~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~-- 171 (218)
|.+++ .++||++||..+..+.+++..|+++|++++++++.++.+ . +.||+++.|+||+++|++.....
T Consensus 124 ~~~~~--------~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~-~~~i~v~~v~pg~~~t~~~~~~~~~ 193 (243)
T PRK07023 124 ASDAA--------ERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-A-NRALRIVSLAPGVVDTGMQATIRAT 193 (243)
T ss_pred hhccC--------CCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhc-C-CCCcEEEEecCCccccHHHHHHHhc
Confidence 98765 689999999999999999999999999999999999999 6 88999999999999987633110
Q ss_pred Ch--HHHHHhhhhhcCCCCCCCHHHHHH-HHHHhccCCCccccccc
Q 027828 172 AP--EEIRSKATDYMAAYKFGEKWDIAM-AALYLASDAAVHRDLIH 214 (218)
Q Consensus 172 ~~--~~~~~~~~~~~~~~~~~~~~e~a~-~~~~L~s~~~~~~~g~~ 214 (218)
.. ......+....+.++..+|+|+|+ .+.+|+++.........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~~~~~ 239 (243)
T PRK07023 194 DEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDDFGSTPTAD 239 (243)
T ss_pred ccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccccCCCCeee
Confidence 00 111223444556778899999999 56788887655544433
No 188
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.94 E-value=5.9e-25 Score=192.77 Aligned_cols=185 Identities=17% Similarity=0.125 Sum_probs=158.1
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCC--CHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDL--SPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~--~~~~~~~~~~~ 78 (218)
++|+.++++++.+++...+.++.++.||++|.++++++++++.+.++++|++|||||......+.+. ..++++.++++
T Consensus 401 ~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 480 (657)
T PRK07201 401 VARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAV 480 (657)
T ss_pred EECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHH
Confidence 3688899999999988777789999999999999999999999999999999999997654443332 25789999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|+.+++.++++++|.|++++ .|+||++||.++..+.+..+.|+++|+++++++++++.|+. ++||+|++|+
T Consensus 481 N~~g~~~l~~~~~~~~~~~~--------~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~~i~v~~v~ 551 (657)
T PRK07201 481 NYFGAVRLILGLLPHMRERR--------FGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETL-SDGITFTTIH 551 (657)
T ss_pred HHHHHHHHHHHHHHhhhhcC--------CCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHHHHHH-hhCCcEEEEE
Confidence 99999999999999999876 68999999999988889999999999999999999999998 8899999999
Q ss_pred cCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
||+++|++...... .......+|+++|+.++..+..
T Consensus 552 pg~v~T~~~~~~~~-----------~~~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 552 MPLVRTPMIAPTKR-----------YNNVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred CCcCcccccCcccc-----------ccCCCCCCHHHHHHHHHHHHHh
Confidence 99999987542210 0112246899999999987643
No 189
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.94 E-value=3e-24 Score=169.61 Aligned_cols=192 Identities=22% Similarity=0.250 Sum_probs=155.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+.++++.+++ +.++.++.+|++|.+++.++++++.+.++++|+||||+|.....+..+.+.+++++.+++|+.
T Consensus 33 ~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 109 (276)
T PRK06482 33 VRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLI 109 (276)
T ss_pred eCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhH
Confidence 46666666554443 346888999999999999999999999999999999999887777888889999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.++++++|.|++++ .++||++||..+..+.++...|+.+|++++.++++++.++. ++||+++.++||.
T Consensus 110 g~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~v~~v~pg~ 180 (276)
T PRK06482 110 GSIQVIRAALPHLRRQG--------GGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVA-PFGIEFTIVEPGP 180 (276)
T ss_pred HHHHHHHHHHHHHHhcC--------CCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhh-ccCcEEEEEeCCc
Confidence 99999999999998766 68999999999888888999999999999999999999998 8999999999999
Q ss_pred ccCCCccCCCC-------hHHHHHhhhhh---cCCCCCCCHHHHHHHHHHhccC
Q 027828 162 IKDTAGVSKLA-------PEEIRSKATDY---MAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 162 v~t~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+.|++...... .......+... -+..-..++++++++++..+..
T Consensus 181 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~ 234 (276)
T PRK06482 181 ARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQ 234 (276)
T ss_pred cccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcC
Confidence 98876432110 01111111111 1122246899999999998853
No 190
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.94 E-value=2.1e-24 Score=170.37 Aligned_cols=188 Identities=18% Similarity=0.216 Sum_probs=151.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++.+. +. .+.++.+|+++.++++++++.+.+.++++|++|||+|.....++.+.+.++++..+++|+.
T Consensus 32 ~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~ 105 (274)
T PRK05693 32 ARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVF 105 (274)
T ss_pred eCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhH
Confidence 46665554432 22 3677899999999999999999999999999999999877778888899999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.++++++|.|.+. .|+||++||..+..+.+....|+++|++++.++++++.|+. ++||+|++|+||+
T Consensus 106 g~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~pg~ 175 (274)
T PRK05693 106 AVVGVTRALFPLLRRS---------RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELA-PFGVQVMEVQPGA 175 (274)
T ss_pred HHHHHHHHHHHHHhhc---------CCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhh-hhCeEEEEEecCc
Confidence 9999999999998764 48899999999988888899999999999999999999998 8999999999999
Q ss_pred ccCCCccCCCChH--------HHH---Hhhhhh--cCCCCCCCHHHHHHHHHHhccC
Q 027828 162 IKDTAGVSKLAPE--------EIR---SKATDY--MAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 162 v~t~~~~~~~~~~--------~~~---~~~~~~--~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+.|++........ .+. +..... .......+|+++|+.++..+..
T Consensus 176 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~ 232 (274)
T PRK05693 176 IASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ 232 (274)
T ss_pred cccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence 9998754321100 010 111111 1112346899999999987754
No 191
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.94 E-value=1.6e-24 Score=168.07 Aligned_cols=184 Identities=14% Similarity=0.072 Sum_probs=157.2
Q ss_pred CCcHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.++++++.+++... +.++.+++||++++++++++++.+.+ ++|++|||+|.....++.+.+.+++.+.+++|+
T Consensus 32 ~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~ 108 (243)
T PRK07102 32 ARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPDIVLIAVGTLGDQAACEADPALALREFRTNF 108 (243)
T ss_pred eCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCCEEEECCcCCCCcccccCCHHHHHHHHHhhh
Confidence 68888888887777654 45788999999999999999988754 479999999987777778889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++.|.|.+.+ .++||++||..+..+.+....|+++|++++++++.++.|+. ++||++++|+||
T Consensus 109 ~~~~~l~~~~~~~~~~~~--------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~-~~gi~v~~v~pg 179 (243)
T PRK07102 109 EGPIALLTLLANRFEARG--------SGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLF-KSGVHVLTVKPG 179 (243)
T ss_pred HHHHHHHHHHHHHHHhCC--------CCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHhh-ccCcEEEEEecC
Confidence 999999999999998876 68999999999888888889999999999999999999998 899999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCcc
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH 209 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~ 209 (218)
+++|++..... .+.....+|+++++.++.+++.....
T Consensus 180 ~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~~~~ 216 (243)
T PRK07102 180 FVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKGKDV 216 (243)
T ss_pred cccChhhhccC------------CCccccCCHHHHHHHHHHHHhCCCCE
Confidence 99987532211 12234578999999999999865443
No 192
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=2.3e-25 Score=163.97 Aligned_cols=184 Identities=17% Similarity=0.101 Sum_probs=156.7
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCC--CCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 23 ~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.....|++...-+.++++..+..+++.|++|||||...+ .... ..+.++|++.++.|+.+.+.+.+.++|.++++..
T Consensus 57 v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~ 136 (253)
T KOG1204|consen 57 VHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPV 136 (253)
T ss_pred ceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCc
Confidence 445677787888889999999999999999999998776 3333 7788999999999999999999999999998732
Q ss_pred CCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCC----ChHH
Q 027828 100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL----APEE 175 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~----~~~~ 175 (218)
.+.+|+|||.++..+++.|+.||.+|+|.++|++.||.| ++.++++.++.||.++|+|..... ..+.
T Consensus 137 -------~~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~E--Ep~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~ 207 (253)
T KOG1204|consen 137 -------NGNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVLASE--EPFDVRVLNYAPGVVDTQMQVCIRETSRMTPA 207 (253)
T ss_pred -------cCeEEEecchhhhccccHHHHhhhhHHHHHHHHHHHhhc--CccceeEEEccCCcccchhHHHHhhccCCCHH
Confidence 588999999999999999999999999999999999998 356999999999999999866432 3345
Q ss_pred HHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccc
Q 027828 176 IRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLL 216 (218)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~ 216 (218)
....+.+....+++.+|...++.+..|+-... |.+|+.+-
T Consensus 208 ~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f~sG~~vd 247 (253)
T KOG1204|consen 208 DLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-FVSGQHVD 247 (253)
T ss_pred HHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-cccccccc
Confidence 55666777777889999999999999996444 99998763
No 193
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.93 E-value=3.8e-24 Score=166.66 Aligned_cols=196 Identities=30% Similarity=0.374 Sum_probs=156.4
Q ss_pred HHHHHHHHHhcC-CCeeEEEecCCC-HHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhhhhHH
Q 027828 8 LRSAVAALHSLG-IPAIGLEGDVRK-REDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDSVGTF 84 (218)
Q Consensus 8 l~~~~~~l~~~~-~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~ 84 (218)
++.+.+.....+ ..+....+|+++ .++++.+++.+.+.+|++|++|||||.... .++.+.+.++|+.++++|+.+++
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~ 123 (251)
T COG1028 44 AEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAF 123 (251)
T ss_pred HHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHH
Confidence 344444443222 257788899998 999999999999999999999999998877 48899999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcc-hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWY-QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
.+++.+.|.+++ . +||++||..+. +.++ +..|+++|+|+.+|++.++.|+. ++||++++|+||++.
T Consensus 124 ~~~~~~~~~~~~----------~-~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~-~~gi~v~~v~PG~~~ 190 (251)
T COG1028 124 LLTRAALPLMKK----------Q-RIVNISSVAGL-GGPPGQAAYAASKAALIGLTKALALELA-PRGIRVNAVAPGYID 190 (251)
T ss_pred HHHHHHHHhhhh----------C-eEEEECCchhc-CCCCCcchHHHHHHHHHHHHHHHHHHHh-hhCcEEEEEEeccCC
Confidence 999988888773 4 79999999998 7777 49999999999999999999998 999999999999999
Q ss_pred CCCccCCCChHH-HHHhhhhhcCCCCCCCHHHHHHHHHHhccCC-Cccccccccc
Q 027828 164 DTAGVSKLAPEE-IRSKATDYMAAYKFGEKWDIAMAALYLASDA-AVHRDLIHLL 216 (218)
Q Consensus 164 t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~-~~~~~g~~i~ 216 (218)
|++......... .........+..+...|.+++..+.|+.+.. ..+++|..+.
T Consensus 191 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 245 (251)
T COG1028 191 TPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYITGQTLP 245 (251)
T ss_pred CcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchhccccCCEEE
Confidence 887654332210 0111111115557889999999999998764 5566666543
No 194
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.93 E-value=4.8e-24 Score=164.70 Aligned_cols=188 Identities=28% Similarity=0.372 Sum_probs=159.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++.+. .++.++.+|+++.+++.++++.+.+.++++|+|||++|.....++.+.+.+++++.+++|+
T Consensus 36 ~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~ 114 (237)
T PRK07326 36 TARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNL 114 (237)
T ss_pred eeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhcc
Confidence 368888888888888654 5788999999999999999999999999999999999987777788899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++++++.+.+ + .++||++||..+..+.+....|+.+|+++.++++.++.|+. +.|+++++|+||
T Consensus 115 ~~~~~~~~~~~~~~~~-~--------~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~-~~gi~v~~v~pg 184 (237)
T PRK07326 115 TGAFYTIKAAVPALKR-G--------GGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLR-QYGIKVSTIMPG 184 (237)
T ss_pred HHHHHHHHHHHHHHHH-C--------CeEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHhc-ccCcEEEEEeec
Confidence 9999999999999843 3 58899999998888888888999999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccc
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHR 210 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~ 210 (218)
++.|+......... .....+++|+++.+++++......+
T Consensus 185 ~~~t~~~~~~~~~~-----------~~~~~~~~d~a~~~~~~l~~~~~~~ 223 (237)
T PRK07326 185 SVATHFNGHTPSEK-----------DAWKIQPEDIAQLVLDLLKMPPRTL 223 (237)
T ss_pred cccCcccccccchh-----------hhccCCHHHHHHHHHHHHhCCcccc
Confidence 99887543322110 0113589999999999997655433
No 195
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.93 E-value=4.2e-24 Score=172.36 Aligned_cols=206 Identities=14% Similarity=0.072 Sum_probs=152.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhh
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++...+.++.++.+|+++.++++++++++.+.++++|+||||||+... ....+.+.++|+..+++|
T Consensus 36 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN 115 (322)
T PRK07453 36 ACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATN 115 (322)
T ss_pred EECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHH
Confidence 3688888888888886555678899999999999999999988877899999999997543 233467889999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------------------------------CCcc
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------------------------------ATWY 124 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------------------------------~~~~ 124 (218)
+.+++.++++++|.|++++.+ .++||++||..+.. ++.+
T Consensus 116 ~~g~~~l~~~~~~~~~~~~~~------~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (322)
T PRK07453 116 HLGHFLLCNLLLEDLKKSPAP------DPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKP 189 (322)
T ss_pred HHHHHHHHHHHHHHHHhCCCC------CceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCc
Confidence 999999999999999876410 26999999965421 1123
Q ss_pred hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc-CCCccCCCCh-HHHHHhhhhhcCCCCCCCHHHHHHHHHHh
Q 027828 125 QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK-DTAGVSKLAP-EEIRSKATDYMAAYKFGEKWDIAMAALYL 202 (218)
Q Consensus 125 ~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~-t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~a~~~~~L 202 (218)
...|+.||.+...+++.+++++...+||+|++++||++. |++....... ..+...+.. .......++++.++.++++
T Consensus 190 ~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 268 (322)
T PRK07453 190 GKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQKLFPWFQK-NITGGYVSQELAGERVAQV 268 (322)
T ss_pred cchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHHHHHHHHHH-HHhhceecHHHHhhHHHHh
Confidence 568999999999999999999842569999999999995 6654322211 111111111 1112345788888888888
Q ss_pred ccCCCcccccc
Q 027828 203 ASDAAVHRDLI 213 (218)
Q Consensus 203 ~s~~~~~~~g~ 213 (218)
+.+.....+|.
T Consensus 269 ~~~~~~~~~G~ 279 (322)
T PRK07453 269 VADPEFAQSGV 279 (322)
T ss_pred hcCcccCCCCc
Confidence 75443334553
No 196
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.93 E-value=2e-24 Score=173.07 Aligned_cols=200 Identities=17% Similarity=0.107 Sum_probs=151.3
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
++|+.++++++.+++.+. +.++.++.+|+++.++++++++++.+.++++|+||||||...+. ...+.++++..+++
T Consensus 46 ~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~--~~~~~~~~~~~~~v 123 (306)
T PRK06197 46 AVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTP--KQTTADGFELQFGT 123 (306)
T ss_pred EeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccCC--CccCCCCcchhhhh
Confidence 368888888888877653 45788999999999999999999999999999999999976432 34667889999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------------CCcchhHhHHhHHHHHHHHHHHHhh
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-------------ATWYQIHVSAAKAAVDSITRSLALE 145 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-------------~~~~~~~y~~sK~a~~~~~~~la~e 145 (218)
|+.+++.+++.++|.|++.+ .++||++||..+.. ++++...|+.+|++++.+++.++.+
T Consensus 124 N~~g~~~l~~~ll~~l~~~~--------~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~ 195 (306)
T PRK06197 124 NHLGHFALTGLLLDRLLPVP--------GSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRR 195 (306)
T ss_pred hhHHHHHHHHHHHHHHhhCC--------CCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998875 68999999987543 2345678999999999999999999
Q ss_pred hcCCCCeEEeee--ecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCcccccccc
Q 027828 146 WGTDYAIRVNGI--APGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHL 215 (218)
Q Consensus 146 l~~~~gi~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i 215 (218)
+. +.|++|+++ +||++.|++...... .....+....+. ...++++.+..+++++.+ ....+|..+
T Consensus 196 l~-~~~i~v~~v~~~PG~v~T~~~~~~~~--~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~-~~~~~g~~~ 262 (306)
T PRK06197 196 LA-AAGATTIAVAAHPGVSNTELARNLPR--ALRPVATVLAPL-LAQSPEMGALPTLRAATD-PAVRGGQYY 262 (306)
T ss_pred hh-cCCCCeEEEEeCCCcccCcccccCcH--HHHHHHHHHHhh-hcCCHHHHHHHHHHHhcC-CCcCCCeEE
Confidence 98 778777665 799999987553321 111111111121 134677777777776643 233455443
No 197
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=2.6e-26 Score=162.20 Aligned_cols=202 Identities=22% Similarity=0.247 Sum_probs=168.3
Q ss_pred HHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC------CCCCCCCHHHHHHHHhhhh
Q 027828 7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL------VPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~------~~~~~~~~~~~~~~~~~n~ 80 (218)
+.+.+++++ |.++.+..+|+++++++...+..++.+||++|.+|||||+... ..-...+.|++++++++|+
T Consensus 45 kg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~ 121 (260)
T KOG1199|consen 45 KGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNV 121 (260)
T ss_pred cchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeee
Confidence 344455554 7889999999999999999999999999999999999996432 2334568899999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.|+|+..+.-...|-+..+++ ...+|.||+..|.+++.+..++..|++||.++.+|+--++++++ ..|||++.|.||
T Consensus 122 ~gtfnvirl~aglmg~nepdq--~gqrgviintasvaafdgq~gqaaysaskgaivgmtlpiardla-~~gir~~tiapg 198 (260)
T KOG1199|consen 122 LGTFNVIRLGAGLMGENEPDQ--NGQRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIARDLA-GDGIRFNTIAPG 198 (260)
T ss_pred eeeeeeeeehhhhhcCCCCCC--CCcceEEEeeceeeeecCccchhhhhcccCceEeeechhhhhcc-cCceEEEeeccc
Confidence 999999999999886553321 12279999999999999999999999999999999999999999 999999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCC-CCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+.||+...-+ +.....+.+.+|. .|++.|.|-++.+-.+. +..+.||+.|..|
T Consensus 199 lf~tpllsslp--ekv~~fla~~ipfpsrlg~p~eyahlvqaii--enp~lngevir~d 253 (260)
T KOG1199|consen 199 LFDTPLLSSLP--EKVKSFLAQLIPFPSRLGHPHEYAHLVQAII--ENPYLNGEVIRFD 253 (260)
T ss_pred ccCChhhhhhh--HHHHHHHHHhCCCchhcCChHHHHHHHHHHH--hCcccCCeEEEec
Confidence 99999765433 3444455555665 47899999999998888 4679999999876
No 198
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=1.4e-24 Score=172.32 Aligned_cols=197 Identities=17% Similarity=0.102 Sum_probs=157.6
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
.+|+.++.+++++++... ..++.+++||+++.++|+++.+++++.++++|++|||||+..... ..+.|+++..|.+
T Consensus 65 ~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~~~--~~t~DG~E~~~~t 142 (314)
T KOG1208|consen 65 ACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAPPF--SLTKDGLELTFAT 142 (314)
T ss_pred EeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccCCc--ccCccchhheehh
Confidence 379999999999999874 357788999999999999999999999999999999999887544 6677899999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------C--CcchhHhHHhHHHHHHHHHHHHhh
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------A--TWYQIHVSAAKAAVDSITRSLALE 145 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~--~~~~~~y~~sK~a~~~~~~~la~e 145 (218)
|..|++.+++.++|.|+.+. .+|||++||..+.. . +.....|+.||.+...+++.|+++
T Consensus 143 N~lg~flLt~lLlp~lk~s~--------~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~ 214 (314)
T KOG1208|consen 143 NYLGHFLLTELLLPLLKRSA--------PSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKR 214 (314)
T ss_pred hhHHHHHHHHHHHHHHhhCC--------CCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999876 58999999987511 1 334446999999999999999999
Q ss_pred hcCCCCeEEeeeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhcc-CCCccccc
Q 027828 146 WGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAAVHRDL 212 (218)
Q Consensus 146 l~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s-~~~~~~~g 212 (218)
+. + ||.++.++||.+.|+.... ...+...+..........+++..|+..++++- ++....+|
T Consensus 215 l~-~-~V~~~~~hPG~v~t~~l~r---~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg 277 (314)
T KOG1208|consen 215 LK-K-GVTTYSVHPGVVKTTGLSR---VNLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSG 277 (314)
T ss_pred hh-c-CceEEEECCCcccccceec---chHHHHHHHHHHHHHhccCHHHHhhheehhccCccccCccc
Confidence 97 6 9999999999999884443 22222323333222233588999999998864 44344444
No 199
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=5.5e-25 Score=160.38 Aligned_cols=140 Identities=26% Similarity=0.332 Sum_probs=130.4
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHH-HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTIN-HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~-~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.+.+..+|+++++++..+..++++ .+|++|+||||||..-..|..+.+.++.++.|++|+.|.+.++|++...+.+.
T Consensus 53 gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-- 130 (289)
T KOG1209|consen 53 GLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-- 130 (289)
T ss_pred CCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--
Confidence 378899999999999999999998 88999999999998877788999999999999999999999999999666665
Q ss_pred CCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCC
Q 027828 100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK 170 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~ 170 (218)
.|.||++.|..+..+.|..+.|+++|+|+.++++.|+.|++ +.||+|..+.||.|.|....+.
T Consensus 131 -------KGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~-PFgv~Vin~itGGv~T~Ia~k~ 193 (289)
T KOG1209|consen 131 -------KGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELK-PFGVRVINAITGGVATDIADKR 193 (289)
T ss_pred -------cceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeee-ccccEEEEecccceecccccCC
Confidence 59999999999999999999999999999999999999999 9999999999999999876653
No 200
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.92 E-value=3.5e-23 Score=160.00 Aligned_cols=195 Identities=24% Similarity=0.246 Sum_probs=157.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++... .++.++.||+++.++++++++++...++++|.+|+++|.....++.+ .++++.+++.|+.
T Consensus 36 ~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~--~~~~~~~~~~n~~ 112 (238)
T PRK05786 36 SRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEE--FSGLEEMLTNHIK 112 (238)
T ss_pred eCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCCCchHH--HHHHHHHHHHhch
Confidence 57777787776766554 36888999999999999999999888899999999999655444433 3889999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-cCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
+++.+.+.++|.+.+ .+++|++||..+. .+.+....|+.+|++++.+++.++.++. .+||+++.|+||
T Consensus 113 ~~~~~~~~~~~~~~~----------~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~-~~gi~v~~i~pg 181 (238)
T PRK05786 113 IPLYAVNASLRFLKE----------GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELL-GRGIRVNGIAPT 181 (238)
T ss_pred HHHHHHHHHHHHHhc----------CCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHHHHHh-hcCeEEEEEecC
Confidence 999999999998864 5789999998764 3567778899999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCC-CCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAA-YKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.|++... ..+ .. ..+. .+..+++++++.+.+++++....++|..+..|
T Consensus 182 ~v~~~~~~~----~~~-~~---~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~ 232 (238)
T PRK05786 182 TISGDFEPE----RNW-KK---LRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVD 232 (238)
T ss_pred ccCCCCCch----hhh-hh---hccccCCCCCHHHHHHHHHHHhcccccCccCCEEEEC
Confidence 999875211 111 11 1111 23578999999999999988888889877654
No 201
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.92 E-value=4.9e-24 Score=156.08 Aligned_cols=133 Identities=30% Similarity=0.375 Sum_probs=125.8
Q ss_pred CCc--HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRR--KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~--~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+|+ .+.++++.+++...+.++.+++||++++++++++++++.+.++++|++|||+|.....++.+.+.++|++++++|
T Consensus 32 ~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 111 (167)
T PF00106_consen 32 SRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVN 111 (167)
T ss_dssp ESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHH
T ss_pred eecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence 566 788999999999888899999999999999999999999999999999999999888899999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhh
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEW 146 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el 146 (218)
+.+++.+.+++.| ++ .|+||++||..+..+.+.+..|+++|+|+++|+++++.|+
T Consensus 112 ~~~~~~~~~~~~~----~~--------~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 112 LFGPFLLAKALLP----QG--------GGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp THHHHHHHHHHHH----HT--------TEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeeeeehhee----cc--------ccceEEecchhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999 33 6999999999999999999999999999999999999986
No 202
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=8.4e-24 Score=162.88 Aligned_cols=192 Identities=21% Similarity=0.127 Sum_probs=163.1
Q ss_pred CCCcHHHHHHHHHHHHhcC--CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhh
Q 027828 1 MGRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEI 78 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 78 (218)
++|+.++++++.+++.-.. .++.+..+|+.|.+++..++++++..++.+|.+++|||..-++-+.+.+.+.++..+++
T Consensus 63 ~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~v 142 (331)
T KOG1210|consen 63 TARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDV 142 (331)
T ss_pred EeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHh
Confidence 3689999999999997642 23678999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
|..++++.+++.++.|++... .|+|+++||..+..+..+++.|+++|+|+.+++..+++|+. ++||+|....
T Consensus 143 Nylgt~~v~~~~~~~mk~~~~-------~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~~l~qE~i-~~~v~Vt~~~ 214 (331)
T KOG1210|consen 143 NYLGTVNVAKAAARAMKKREH-------LGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAEALRQELI-KYGVHVTLYY 214 (331)
T ss_pred hhhhhHHHHHHHHHHhhcccc-------CcEEEEehhhhhhcCcccccccccHHHHHHHHHHHHHHHHh-hcceEEEEEc
Confidence 999999999999999998753 47999999999999999999999999999999999999999 9999999999
Q ss_pred cCcccCCCccCCCC-hHHHHHhhhhhcCCCCCCCHHHHHHHHHHhc
Q 027828 159 PGPIKDTAGVSKLA-PEEIRSKATDYMAAYKFGEKWDIAMAALYLA 203 (218)
Q Consensus 159 pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~ 203 (218)
|+.+.||.+..+.. .++... ..+.. ....++|++|.+++-=+
T Consensus 215 P~~~~tpGfE~En~tkP~~t~-ii~g~--ss~~~~e~~a~~~~~~~ 257 (331)
T KOG1210|consen 215 PPDTLTPGFERENKTKPEETK-IIEGG--SSVIKCEEMAKAIVKGM 257 (331)
T ss_pred CCCCCCCccccccccCchhee-eecCC--CCCcCHHHHHHHHHhHH
Confidence 99999986554332 122111 11111 12357888888887544
No 203
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.92 E-value=2.6e-23 Score=161.11 Aligned_cols=175 Identities=15% Similarity=0.069 Sum_probs=142.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.++ +.++.++.||+++.++++++++++.. .+|.+|+|+|.....+..+.+.++|++++++|+.
T Consensus 32 ~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 104 (240)
T PRK06101 32 GRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLPF---IPELWIFNAGDCEYMDDGKVDATLMARVFNVNVL 104 (240)
T ss_pred ECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 5777766555432 35688899999999999999887642 5799999999654444556789999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++++++++.|.|.+ .++||++||..+..+.+....|+++|++++++++.++.|+. ++||++++++||+
T Consensus 105 ~~~~l~~~~~~~~~~----------~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~-~~gi~v~~v~pg~ 173 (240)
T PRK06101 105 GVANCIEGIQPHLSC----------GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLR-PKGIEVVTVFPGF 173 (240)
T ss_pred HHHHHHHHHHHhhhc----------CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHH-hcCceEEEEeCCc
Confidence 999999999999864 47899999999988889999999999999999999999998 8999999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
+.|++...... ......+|+++|+.++..+..+
T Consensus 174 i~t~~~~~~~~------------~~~~~~~~~~~a~~i~~~i~~~ 206 (240)
T PRK06101 174 VATPLTDKNTF------------AMPMIITVEQASQEIRAQLARG 206 (240)
T ss_pred CCCCCcCCCCC------------CCCcccCHHHHHHHHHHHHhcC
Confidence 99886443210 0112358999999998777543
No 204
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.91 E-value=1e-23 Score=162.66 Aligned_cols=157 Identities=19% Similarity=0.232 Sum_probs=140.8
Q ss_pred CCCcHHHHHHHHHHHHhc-CCCeeEEEecCCCHHHHHHHHHHHHHHhC--CccEEEeCCCCCC--CCCCCCCCHHHHHHH
Q 027828 1 MGRRKTVLRSAVAALHSL-GIPAIGLEGDVRKREDAVRVVESTINHFG--KLDILVNAAAGNF--LVPAEDLSPNGFRTV 75 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~--~ld~li~~ag~~~--~~~~~~~~~~~~~~~ 75 (218)
++|++++|+.+++||.+. +.++.++.+|.++.+. ..+.+++... .+.+||||+|... |..+.+.+.+.+++.
T Consensus 79 IsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~---~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~i 155 (312)
T KOG1014|consen 79 ISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE---VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNI 155 (312)
T ss_pred EeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch---hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhhe
Confidence 589999999999999875 5688999999999887 3444444443 6779999999776 678889998899999
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
+++|+.+...+++.++|.|.+++ +|.||+++|.++..+.|.++.|+++|+.++.|+++|..|+. .+||.|-
T Consensus 156 i~vN~~~~~~~t~~ilp~M~~r~--------~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~-~~gI~Vq 226 (312)
T KOG1014|consen 156 INVNILSVTLLTQLILPGMVERK--------KGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRCLQKEYE-SKGIFVQ 226 (312)
T ss_pred eEEecchHHHHHHHhhhhhhcCC--------CceEEEeccccccccChhHHHHHHHHHHHHHHHHHHHHHHH-hcCeEEE
Confidence 99999999999999999999987 89999999999999999999999999999999999999998 9999999
Q ss_pred eeecCcccCCCccC
Q 027828 156 GIAPGPIKDTAGVS 169 (218)
Q Consensus 156 ~v~pG~v~t~~~~~ 169 (218)
++.|+.|.|.+...
T Consensus 227 ~v~p~~VaTkm~~~ 240 (312)
T KOG1014|consen 227 SVIPYLVATKMAKY 240 (312)
T ss_pred Eeehhheecccccc
Confidence 99999999987554
No 205
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.7e-22 Score=155.35 Aligned_cols=187 Identities=15% Similarity=0.152 Sum_probs=149.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+.++++.+.+...+.++.++.+|+++++++.++++ +++|+||||+|.....++.+.+.+.++..+++|+.
T Consensus 33 ~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 106 (257)
T PRK09291 33 VQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVF 106 (257)
T ss_pred eCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhH
Confidence 577777777777776667788899999999998877653 38999999999887788889999999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.+++.+.+.+ .++||++||..+..+.++...|+++|++++.+++.++.++. +.||+++.|+||+
T Consensus 107 ~~~~~~~~~~~~~~~~~--------~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~-~~gi~~~~v~pg~ 177 (257)
T PRK09291 107 GPLELTQGFVRKMVARG--------KGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELK-PFGIQVATVNPGP 177 (257)
T ss_pred HHHHHHHHHHHHHHhcC--------CceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHHHH-hcCcEEEEEecCc
Confidence 99999999999998876 68999999999888888889999999999999999999998 8899999999999
Q ss_pred ccCCCccCCCC-h-------HHHHHhhhhhcCCCCCCCHHHHHHHHHHhcc
Q 027828 162 IKDTAGVSKLA-P-------EEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204 (218)
Q Consensus 162 v~t~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s 204 (218)
+.|++...... . ...........+. ...+++++++.++.++.
T Consensus 178 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 227 (257)
T PRK09291 178 YLTGFNDTMAETPKRWYDPARNFTDPEDLAFPL-EQFDPQEMIDAMVEVIP 227 (257)
T ss_pred ccccchhhhhhhhhhhcchhhHHHhhhhhhccc-cCCCHHHHHHHHHHHhc
Confidence 98875432111 0 0111111111222 23588899888887664
No 206
>PRK08017 oxidoreductase; Provisional
Probab=99.90 E-value=3.2e-22 Score=156.23 Aligned_cols=192 Identities=19% Similarity=0.125 Sum_probs=151.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.++++.+. +. .+.++.||+++.+++..+++.+.... +++|++|||+|.....++.+.+.+++++.+++|+
T Consensus 33 ~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~ 106 (256)
T PRK08017 33 CRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNF 106 (256)
T ss_pred eCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhh
Confidence 56666655432 22 36788999999999999999887754 6899999999987667788889999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.+++.+++.+++.+++.+ .++||++||..+..+.+....|+++|++++.+++.++.++. ++|++++.+.||
T Consensus 107 ~g~~~~~~~~~~~~~~~~--------~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~-~~~i~v~~v~pg 177 (256)
T PRK08017 107 FGTHQLTMLLLPAMLPHG--------EGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELR-HSGIKVSLIEPG 177 (256)
T ss_pred HHHHHHHHHHHHHHhhcC--------CCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEeCC
Confidence 999999999999998876 68999999998888888999999999999999999999998 889999999999
Q ss_pred cccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCc
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAV 208 (218)
Q Consensus 161 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~ 208 (218)
++.|++........................+|+|+++.+..+++....
T Consensus 178 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 178 PIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred CcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 998875433211110000000000112247999999999999976543
No 207
>PRK08264 short chain dehydrogenase; Validated
Probab=99.89 E-value=3.4e-21 Score=148.89 Aligned_cols=160 Identities=26% Similarity=0.260 Sum_probs=135.2
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC-CCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG-NFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 97 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 97 (218)
+.++.++.+|+++.+++.++++. ++++|++||++|. ....++.+.+.+++...+++|+.+++.+.+++.+.+++.
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 123 (238)
T PRK08264 48 GPRVVPLQLDVTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN 123 (238)
T ss_pred CCceEEEEecCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 45688899999999998887764 4689999999998 555678888999999999999999999999999999887
Q ss_pred CCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHH
Q 027828 98 GRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIR 177 (218)
Q Consensus 98 ~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~ 177 (218)
+ .++||++||..+..+.+++..|+.+|++++.+++.++.++. ++|++++.++||.++|++......
T Consensus 124 ~--------~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~-~~~i~~~~v~pg~v~t~~~~~~~~----- 189 (238)
T PRK08264 124 G--------GGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELA-PQGTRVLGVHPGPIDTDMAAGLDA----- 189 (238)
T ss_pred C--------CCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHHhh-hcCeEEEEEeCCcccccccccCCc-----
Confidence 6 68999999999988889999999999999999999999998 889999999999999876332110
Q ss_pred HhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 178 SKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 178 ~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
...+++++++.++..+...
T Consensus 190 ----------~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 190 ----------PKASPADVARQILDALEAG 208 (238)
T ss_pred ----------CCCCHHHHHHHHHHHHhCC
Confidence 1346677777777665543
No 208
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.88 E-value=5.8e-21 Score=146.51 Aligned_cols=135 Identities=19% Similarity=0.220 Sum_probs=117.0
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC--CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL--VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
++.++.+|++|.++++++++.+.+ +++|++|||+|...+ .++.+.+.++++..+++|+.+++.+++++.|.+.+.
T Consensus 46 ~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~- 122 (225)
T PRK08177 46 GVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG- 122 (225)
T ss_pred ccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-
Confidence 567789999999999999988854 489999999997643 456788899999999999999999999999988753
Q ss_pred CCCCCCCCCceEEEecccccccCC---cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCc
Q 027828 99 RGQASSSSGGIIINISATLHYTAT---WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~~---~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~ 167 (218)
.+.++++||..+..+. ..+..|+++|++++.+++.++.|+. ++||+|++|+||+++|++.
T Consensus 123 --------~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~-~~~i~v~~i~PG~i~t~~~ 185 (225)
T PRK08177 123 --------QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELG-EPTLTVLSMHPGWVKTDMG 185 (225)
T ss_pred --------CCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhh-cCCeEEEEEcCCceecCCC
Confidence 4789999997765433 3567899999999999999999998 8999999999999999864
No 209
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.88 E-value=2e-20 Score=143.44 Aligned_cols=180 Identities=21% Similarity=0.227 Sum_probs=144.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++.+++ ..+.++.+|++|.+++.++++. ++++|+|||++|.....++.+.+.++|.+.+++|+.
T Consensus 33 ~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 104 (227)
T PRK08219 33 GRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQ----LGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVV 104 (227)
T ss_pred eCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhH
Confidence 56666665554433 2478899999999998887764 358999999999877677778889999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.+++.+++.+++. .+++|++||..+..+.++...|+.+|++++.+++.++.++. .. ++++.++||+
T Consensus 105 ~~~~~~~~~~~~~~~~---------~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~~-~~-i~~~~i~pg~ 173 (227)
T PRK08219 105 APAELTRLLLPALRAA---------HGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEP-GN-VRVTSVHPGR 173 (227)
T ss_pred HHHHHHHHHHHHHHhC---------CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHhc-CC-ceEEEEecCC
Confidence 9999999999998875 47899999999988888899999999999999999999876 55 9999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
+.+++..... .......+..++.+++|++++++++++..
T Consensus 174 ~~~~~~~~~~------~~~~~~~~~~~~~~~~dva~~~~~~l~~~ 212 (227)
T PRK08219 174 TDTDMQRGLV------AQEGGEYDPERYLRPETVAKAVRFAVDAP 212 (227)
T ss_pred ccchHhhhhh------hhhccccCCCCCCCHHHHHHHHHHHHcCC
Confidence 8876432211 01111223356789999999999999753
No 210
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.3e-20 Score=144.35 Aligned_cols=178 Identities=16% Similarity=0.133 Sum_probs=136.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC--CCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~--~~~~~~~~~~~~~~~~~~n 79 (218)
+|+.++++++. .. .+.++.+|+++.++++++++.+.. +++|++|||+|... ..++.+.+.++|+..+++|
T Consensus 32 ~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n 103 (222)
T PRK06953 32 ARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTN 103 (222)
T ss_pred ECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhh
Confidence 46655554432 22 256789999999999998877642 47999999999763 3456677899999999999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcch---hHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ---IHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~---~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
+.+++.+++++.|.|.+. .+++|+++|..+..+.... ..|+++|++++.+++.++.++. ++++++
T Consensus 104 ~~~~~~l~~~~~~~~~~~---------~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~---~i~v~~ 171 (222)
T PRK06953 104 VLGPMQLLPILLPLVEAA---------GGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQAR---HATCIA 171 (222)
T ss_pred hhhHHHHHHHHHHhhhcc---------CCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhcc---CcEEEE
Confidence 999999999999988653 5889999998776553222 3599999999999999998864 799999
Q ss_pred eecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccc
Q 027828 157 IAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLL 216 (218)
Q Consensus 157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~ 216 (218)
|+||+++|++... .....+++.++.+..++.....-.+|..+.
T Consensus 172 v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (222)
T PRK06953 172 LHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQATRRDNGRFFQ 214 (222)
T ss_pred ECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcCcccCceEEe
Confidence 9999999986432 113477888888888776555555555543
No 211
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.82 E-value=9.6e-19 Score=168.00 Aligned_cols=144 Identities=13% Similarity=0.048 Sum_probs=128.7
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
+++..+++.+.|.++.++.||++|.++++++++.+.+. ++||+||||||+.....+.+.+.++|++++++|+.|.++++
T Consensus 2082 i~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll 2160 (2582)
T TIGR02813 2082 IAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLL 2160 (2582)
T ss_pred HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 34455666677889999999999999999999999887 68999999999988888999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCc
Q 027828 88 HEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167 (218)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~ 167 (218)
+++.+.+ .++||++||..+..+.+++..|+++|++++.+++.++.++. +++|++|+||+++|+|.
T Consensus 2161 ~al~~~~------------~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~---~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813 2161 AALNAEN------------IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP---SAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred HHHHHhC------------CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEECCeecCCcc
Confidence 9887643 24699999999999999999999999999999999999875 59999999999998875
No 212
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.82 E-value=1.8e-18 Score=134.20 Aligned_cols=149 Identities=11% Similarity=0.067 Sum_probs=111.7
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCC
Q 027828 23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQA 102 (218)
Q Consensus 23 ~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~ 102 (218)
..+.+|+++.+++.+ .++++|++|||||... ..+.+.++|++.+++|+.+++.++++++|.|++++...
T Consensus 61 ~~~~~D~~~~~~~~~-------~~~~iDilVnnAG~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~- 129 (245)
T PRK12367 61 EWIKWECGKEESLDK-------QLASLDVLILNHGINP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQI- 129 (245)
T ss_pred eEEEeeCCCHHHHHH-------hcCCCCEEEECCccCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCC-
Confidence 568899999987754 3568999999999743 23467899999999999999999999999998742100
Q ss_pred CCCCCceEEEecccccccCCcchhHhHHhHHHHHHHH---HHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHh
Q 027828 103 SSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSIT---RSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179 (218)
Q Consensus 103 ~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~---~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~ 179 (218)
.+.+++.+|.++..+ +....|++||+|+..+. +.++.|+. +.|++|+.+.||+++|++..
T Consensus 130 ----g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~-~~~i~v~~~~pg~~~t~~~~----------- 192 (245)
T PRK12367 130 ----PKEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNE-RKKLIIRKLILGPFRSELNP----------- 192 (245)
T ss_pred ----CeEEEEEecccccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhc-ccccEEEEecCCCcccccCc-----------
Confidence 233444455555433 45678999999985543 44555556 78999999999999887510
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHhccCC
Q 027828 180 ATDYMAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 180 ~~~~~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
....+|+++|+.+++.++..
T Consensus 193 -------~~~~~~~~vA~~i~~~~~~~ 212 (245)
T PRK12367 193 -------IGIMSADFVAKQILDQANLG 212 (245)
T ss_pred -------cCCCCHHHHHHHHHHHHhcC
Confidence 12468999999999998654
No 213
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.75 E-value=3.2e-17 Score=120.45 Aligned_cols=134 Identities=18% Similarity=0.134 Sum_probs=116.5
Q ss_pred HHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHH
Q 027828 13 AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 92 (218)
Q Consensus 13 ~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 92 (218)
+++...+.++.++.+|++++++++.+++.+...++++|++||++|.....++.+.+.++++..+++|+.+++.+.+++.+
T Consensus 46 ~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (180)
T smart00822 46 AELEALGAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD 125 (180)
T ss_pred HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc
Confidence 45555567888999999999999999999999899999999999987666778889999999999999999999998832
Q ss_pred HHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 93 YLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 93 ~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
.+ .+++|++||..+..+.+.+..|+++|+++..+++.+ . +.|+++..+.||++.
T Consensus 126 ----~~--------~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~~----~-~~~~~~~~~~~g~~~ 179 (180)
T smart00822 126 ----LP--------LDFFVLFSSVAGVLGNPGQANYAAANAFLDALAAHR----R-ARGLPATSINWGAWA 179 (180)
T ss_pred ----CC--------cceEEEEccHHHhcCCCCchhhHHHHHHHHHHHHHH----H-hcCCceEEEeecccc
Confidence 22 588999999999888899999999999999998776 3 557889999999875
No 214
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.74 E-value=3e-16 Score=129.11 Aligned_cols=167 Identities=14% Similarity=0.138 Sum_probs=118.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+++++. +...+.++..+.+|++|.+++.+. ++++|++|||||.... .+.+.+++++.+++|+.
T Consensus 209 ~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~-------l~~IDiLInnAGi~~~---~~~s~e~~~~~~~vNv~ 275 (406)
T PRK07424 209 TSNSDKITLE---INGEDLPVKTLHWQVGQEAALAEL-------LEKVDILIINHGINVH---GERTPEAINKSYEVNTF 275 (406)
T ss_pred eCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHH-------hCCCCEEEECCCcCCC---CCCCHHHHHHHHHHHHH
Confidence 4555554332 222234567889999999887554 3589999999997542 36788999999999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++.++++++|.|++++.+. ..+.+|++|+ ++ ...+..+.|+++|+|+.+++. ++++. .++.+..+.||+
T Consensus 276 g~i~Li~a~lp~m~~~~~~~----~~~iiVn~Ss-a~-~~~~~~~~Y~ASKaAl~~l~~-l~~~~---~~~~I~~i~~gp 345 (406)
T PRK07424 276 SAWRLMELFFTTVKTNRDKA----TKEVWVNTSE-AE-VNPAFSPLYELSKRALGDLVT-LRRLD---APCVVRKLILGP 345 (406)
T ss_pred HHHHHHHHHHHHHHhcCCCC----CCeEEEEEcc-cc-ccCCCchHHHHHHHHHHHHHH-HHHhC---CCCceEEEEeCC
Confidence 99999999999998764110 0244566654 33 333456789999999999975 44432 356677788999
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCcc
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVH 209 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~ 209 (218)
+.|++. +. ...+|+++|+.+++.++.+...
T Consensus 346 ~~t~~~-----------------~~-~~~spe~vA~~il~~i~~~~~~ 375 (406)
T PRK07424 346 FKSNLN-----------------PI-GVMSADWVAKQILKLAKRDFRN 375 (406)
T ss_pred CcCCCC-----------------cC-CCCCHHHHHHHHHHHHHCCCCE
Confidence 887641 11 2469999999999999766553
No 215
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.71 E-value=6.5e-17 Score=121.29 Aligned_cols=164 Identities=18% Similarity=0.179 Sum_probs=138.6
Q ss_pred CCCcHHHHHHHHHHHHhcC----CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC-----------
Q 027828 1 MGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE----------- 65 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~----------- 65 (218)
++|+-++.|++...+.+.. .++..+.+|+++..++.++..+++++|.++|.++.|||.+....+.
T Consensus 38 tcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsn 117 (341)
T KOG1478|consen 38 TCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSN 117 (341)
T ss_pred EeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhc
Confidence 4799999999999998753 3678899999999999999999999999999999999976532221
Q ss_pred ----------------CCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC--------
Q 027828 66 ----------------DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-------- 121 (218)
Q Consensus 66 ----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-------- 121 (218)
..+.+++..+++.|+.|++++.+.+.|.+.... +..+|++||..+...
T Consensus 118 pv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~--------~~~lvwtSS~~a~kk~lsleD~q 189 (341)
T KOG1478|consen 118 PVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSD--------NPQLVWTSSRMARKKNLSLEDFQ 189 (341)
T ss_pred hhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCC--------CCeEEEEeecccccccCCHHHHh
Confidence 456788999999999999999999999998876 569999999987653
Q ss_pred -CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCCh
Q 027828 122 -TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP 173 (218)
Q Consensus 122 -~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~ 173 (218)
..+...|..||.+.+-+--.+-+.+. +.|+.-.+++||...|.+......+
T Consensus 190 ~~kg~~pY~sSKrl~DlLh~A~~~~~~-~~g~~qyvv~pg~~tt~~~~~~l~~ 241 (341)
T KOG1478|consen 190 HSKGKEPYSSSKRLTDLLHVALNRNFK-PLGINQYVVQPGIFTTNSFSEYLNP 241 (341)
T ss_pred hhcCCCCcchhHHHHHHHHHHHhcccc-ccchhhhcccCceeecchhhhhhhh
Confidence 24566799999999999888888887 8899999999999877765555443
No 216
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.69 E-value=1.7e-16 Score=117.74 Aligned_cols=139 Identities=20% Similarity=0.187 Sum_probs=108.2
Q ss_pred HHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHH
Q 027828 7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 86 (218)
..++..+++++.|.++..+.||++|++++.++++.+.++++++++|||.+|...+.++.+.+.++++.++...+.+..++
T Consensus 40 ~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L 119 (181)
T PF08659_consen 40 EAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNL 119 (181)
T ss_dssp THHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHH
Confidence 35578888888899999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcc
Q 027828 87 CHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPI 162 (218)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v 162 (218)
.+++.+ .. -..+|++||..+..+.+++..|+++.+.++.+++..+.. |.++.+|.-|..
T Consensus 120 ~~~~~~----~~--------l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~~~~~~-----g~~~~sI~wg~W 178 (181)
T PF08659_consen 120 HEALEN----RP--------LDFFILFSSISSLLGGPGQSAYAAANAFLDALARQRRSR-----GLPAVSINWGAW 178 (181)
T ss_dssp HHHHTT----TT--------TSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHHHHHHT-----TSEEEEEEE-EB
T ss_pred HHHhhc----CC--------CCeEEEECChhHhccCcchHhHHHHHHHHHHHHHHHHhC-----CCCEEEEEcccc
Confidence 998865 22 356999999999999999999999999999999876442 566777776654
No 217
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.69 E-value=1.7e-15 Score=128.03 Aligned_cols=184 Identities=11% Similarity=0.024 Sum_probs=130.6
Q ss_pred CCcHHHHHHHHHHHHhc-----C----CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHH
Q 027828 2 GRRKTVLRSAVAALHSL-----G----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~-----~----~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~ 72 (218)
+|+.++++.+.+++.+. | .++.++.+|+++.+++.++ ++++|+||||+|.... ...++
T Consensus 111 ~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-------LggiDiVVn~AG~~~~------~v~d~ 177 (576)
T PLN03209 111 VRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-------LGNASVVICCIGASEK------EVFDV 177 (576)
T ss_pred eCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-------hcCCCEEEEccccccc------cccch
Confidence 68888888877766431 2 3578899999999887653 4689999999996431 12246
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-cCCcchhHhHHhHHHHHHHHHHHHhhhcCCCC
Q 027828 73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY-TATWYQIHVSAAKAAVDSITRSLALEWGTDYA 151 (218)
Q Consensus 73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~~~~~la~el~~~~g 151 (218)
...+++|+.+..++++++.. .+ .++||++||.++. .+.+.. .|. +|+++..+.+.+..++. .+|
T Consensus 178 ~~~~~VN~~Gt~nLl~Aa~~----ag--------VgRIV~VSSiga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~-~sG 242 (576)
T PLN03209 178 TGPYRIDYLATKNLVDAATV----AK--------VNHFILVTSLGTNKVGFPAA-ILN-LFWGVLCWKRKAEEALI-ASG 242 (576)
T ss_pred hhHHHHHHHHHHHHHHHHHH----hC--------CCEEEEEccchhcccCcccc-chh-hHHHHHHHHHHHHHHHH-HcC
Confidence 77889999999999988754 23 5789999998764 233222 244 78888888888888888 889
Q ss_pred eEEeeeecCcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC-CCcccccccc
Q 027828 152 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASD-AAVHRDLIHL 215 (218)
Q Consensus 152 i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~-~~~~~~g~~i 215 (218)
|+++.|+||++.+++.... ..... .......+.++..+.+|+|+.++||+++ ++.+++...+
T Consensus 243 IrvTIVRPG~L~tp~d~~~-~t~~v-~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvev 305 (576)
T PLN03209 243 LPYTIVRPGGMERPTDAYK-ETHNL-TLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEV 305 (576)
T ss_pred CCEEEEECCeecCCccccc-cccce-eeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEE
Confidence 9999999999987643211 01111 1111224567788999999999999995 4566665544
No 218
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.63 E-value=5e-14 Score=113.66 Aligned_cols=151 Identities=13% Similarity=0.040 Sum_probs=113.6
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-----------------CC-------
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-----------------AE------- 65 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~-----------------~~------- 65 (218)
.+.+++.+.|..+..+.||++++++++++++.+.+.+|+||+||||+|...... +.
T Consensus 93 a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~ 172 (398)
T PRK13656 93 AFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTD 172 (398)
T ss_pred HHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCccccc
Confidence 344555555777888999999999999999999999999999999999773211 11
Q ss_pred ----------CCCHHHHHHHHhhhhh-hHHHHHH--HHHHHHHhcCCCCCCCCCCceEEEecccccccCCcch--hHhHH
Q 027828 66 ----------DLSPNGFRTVIEIDSV-GTFIMCH--EALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQ--IHVSA 130 (218)
Q Consensus 66 ----------~~~~~~~~~~~~~n~~-~~~~l~~--~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~ 130 (218)
..+.++++..+++.-- ....+++ ...+.|.+ ++++|..|..++...+|.| ..-+.
T Consensus 173 ~~~i~~~s~~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla~----------g~~~va~TY~G~~~t~p~Y~~g~mG~ 242 (398)
T PRK13656 173 KDVIIEVTVEPATEEEIADTVKVMGGEDWELWIDALDEAGVLAE----------GAKTVAYSYIGPELTHPIYWDGTIGK 242 (398)
T ss_pred ccceeEEEEeeCCHHHHHHHHHhhccchHHHHHHHHHhcccccC----------CcEEEEEecCCcceeecccCCchHHH
Confidence 2344555554433322 1233333 33333332 6899999999999988877 58899
Q ss_pred hHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCC
Q 027828 131 AKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171 (218)
Q Consensus 131 sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~ 171 (218)
+|+++++-++.|+.+|+ +.|+|+|++.+|++.|.-...-+
T Consensus 243 AKa~LE~~~r~La~~L~-~~giran~i~~g~~~T~Ass~Ip 282 (398)
T PRK13656 243 AKKDLDRTALALNEKLA-AKGGDAYVSVLKAVVTQASSAIP 282 (398)
T ss_pred HHHHHHHHHHHHHHHhh-hcCCEEEEEecCcccchhhhcCC
Confidence 99999999999999999 99999999999999987544433
No 219
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.59 E-value=1.4e-13 Score=111.21 Aligned_cols=172 Identities=17% Similarity=0.079 Sum_probs=120.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+..+.+.+.+++. +.++.++.+|++|.+++.++++ .+|+|||+||.... +..+.+ ....+++|+.
T Consensus 37 ~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~-------~iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~ 103 (324)
T TIGR03589 37 SRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR-------GVDYVVHAAALKQV-PAAEYN---PFECIRTNIN 103 (324)
T ss_pred cCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh-------cCCEEEECcccCCC-chhhcC---HHHHHHHHHH
Confidence 344444444433332 2468889999999999887764 58999999996532 222223 3468999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+++++++++.+ .+ .++||++||..... +...|+++|++.+.+++.++.+.. .+|+++++++||.
T Consensus 104 g~~~ll~aa~~----~~--------~~~iV~~SS~~~~~---p~~~Y~~sK~~~E~l~~~~~~~~~-~~gi~~~~lR~g~ 167 (324)
T TIGR03589 104 GAQNVIDAAID----NG--------VKRVVALSTDKAAN---PINLYGATKLASDKLFVAANNISG-SKGTRFSVVRYGN 167 (324)
T ss_pred HHHHHHHHHHH----cC--------CCEEEEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHhhcc-ccCcEEEEEeecc
Confidence 99999999875 23 47899999975443 346799999999999999988877 8899999999999
Q ss_pred ccCCCccCCCChHHHHHhhhhh---cCC------CCCCCHHHHHHHHHHhccC
Q 027828 162 IKDTAGVSKLAPEEIRSKATDY---MAA------YKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~e~a~~~~~L~s~ 205 (218)
+.++... .-+.+....... .+. +-+...+|++++++.++..
T Consensus 168 v~G~~~~---~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~ 217 (324)
T TIGR03589 168 VVGSRGS---VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER 217 (324)
T ss_pred eeCCCCC---cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence 9976421 112222222111 221 1246889999999988753
No 220
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.48 E-value=1.9e-12 Score=104.60 Aligned_cols=160 Identities=12% Similarity=0.046 Sum_probs=114.2
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|+++.+++.++++ ++|+|||+||.... ..+.+.+...+++|+.+++++++++.+.+ +
T Consensus 56 ~~~~~~~~D~~d~~~~~~~~~-------~~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~- 120 (325)
T PLN02989 56 ERLKLFKADLLDEGSFELAID-------GCETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---S- 120 (325)
T ss_pred CceEEEeCCCCCchHHHHHHc-------CCCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---C-
Confidence 468889999999998887765 58999999995431 23345678899999999999999987642 1
Q ss_pred CCCCCCCCceEEEecccccccCCc----------------------chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee
Q 027828 100 GQASSSSGGIIINISATLHYTATW----------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~~----------------------~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v 157 (218)
.++||++||..++.+.. ....|+.+|.+.+.+++.++.+ +|+.+..+
T Consensus 121 -------~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~il 189 (325)
T PLN02989 121 -------VKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD----NEIDLIVL 189 (325)
T ss_pred -------ceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH----cCCeEEEE
Confidence 36899999986543211 0246999999999999887654 36999999
Q ss_pred ecCcccCCCccCC--CChHHHHHhhhhhcCC----CCCCCHHHHHHHHHHhccC
Q 027828 158 APGPIKDTAGVSK--LAPEEIRSKATDYMAA----YKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 158 ~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~e~a~~~~~L~s~ 205 (218)
+|+.+.+|..... .....+........+. +.+...+|+|++++.++..
T Consensus 190 R~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~ 243 (325)
T PLN02989 190 NPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALET 243 (325)
T ss_pred cCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcC
Confidence 9999998764332 1112222222222222 2356789999999988764
No 221
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.42 E-value=9.7e-12 Score=101.53 Aligned_cols=164 Identities=14% Similarity=0.103 Sum_probs=114.6
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|+++.+++.++++.. ++|+|||+|+... ...+.+++...+++|+.+++.+++++.. ...
T Consensus 52 ~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vih~A~~~~----~~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~- 118 (349)
T TIGR02622 52 KKIEDHFGDIRDAAKLRKAIAEF-----KPEIVFHLAAQPL----VRKSYADPLETFETNVMGTVNLLEAIRA---IGS- 118 (349)
T ss_pred CCceEEEccCCCHHHHHHHHhhc-----CCCEEEECCcccc----cccchhCHHHHHHHhHHHHHHHHHHHHh---cCC-
Confidence 35778899999999998888754 6899999999532 2334456778899999999999998742 111
Q ss_pred CCCCCCCCceEEEeccccccc------------CCcchhHhHHhHHHHHHHHHHHHhhhcCC----CCeEEeeeecCccc
Q 027828 100 GQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGTD----YAIRVNGIAPGPIK 163 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~------------~~~~~~~y~~sK~a~~~~~~~la~el~~~----~gi~v~~v~pG~v~ 163 (218)
.++||++||...+. +..+...|+.+|.+.+.+++.++.++. + +|++++.++|+.+.
T Consensus 119 -------~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~i~~~~lR~~~vy 190 (349)
T TIGR02622 119 -------VKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFF-GVANFHGIKIASARAGNVI 190 (349)
T ss_pred -------CCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhh-cccccCCCcEEEEccCccc
Confidence 36899999964332 123456899999999999999988875 4 48999999999999
Q ss_pred CCCccC-CCChHHHHHhhhhhcC--------CCCCCCHHHHHHHHHHhcc
Q 027828 164 DTAGVS-KLAPEEIRSKATDYMA--------AYKFGEKWDIAMAALYLAS 204 (218)
Q Consensus 164 t~~~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~e~a~~~~~L~s 204 (218)
++.... ...-+.+........+ .+-+...+|++++++.++.
T Consensus 191 Gp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~ 240 (349)
T TIGR02622 191 GGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLLAE 240 (349)
T ss_pred CCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHHHH
Confidence 764211 1111222222222111 1223566899999887764
No 222
>PRK06720 hypothetical protein; Provisional
Probab=99.37 E-value=1.4e-11 Score=90.14 Aligned_cols=114 Identities=18% Similarity=0.131 Sum_probs=91.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-CCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-VPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-~~~~~~~~~~~~~~~~~n~ 80 (218)
+|+.+.++++.+++.+.+.+..++.+|+++.+++.++++++.+.+|++|++|||||.... .++++.+.++ ++ ..|+
T Consensus 47 ~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~ 123 (169)
T PRK06720 47 DIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCI 123 (169)
T ss_pred ECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceec
Confidence 577778888888887767778889999999999999999999999999999999997764 4555545554 33 6778
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY 119 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~ 119 (218)
.+.+..++.+.++|++++. .-..+..||+..||+.++.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 124 NDVWIEIKQLTSSFMKQQE-EVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred cHHHHHHHHHHHHHHhcCC-EEEeecCceeeEecccccc
Confidence 8889999999999998742 2224568999999998754
No 223
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.33 E-value=1.2e-10 Score=95.26 Aligned_cols=170 Identities=19% Similarity=0.082 Sum_probs=115.1
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|++|.++++++++. .++|+|||+||.... ..+.+.++..+++|+.+++++++++.+.+.....
T Consensus 51 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~ 121 (355)
T PRK10217 51 ERFAFEKVDICDRAELARVFTE-----HQPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTE 121 (355)
T ss_pred CceEEEECCCcChHHHHHHHhh-----cCCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccc
Confidence 3567889999999998888775 269999999996432 2334567889999999999999999875421100
Q ss_pred CCCCCCCCceEEEeccccccc-------------CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCC
Q 027828 100 GQASSSSGGIIINISATLHYT-------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~-------------~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~ 166 (218)
. .....++|++||...+. +..+...|+.+|.+.+.+++.++.++ |+++..++|+.+..|.
T Consensus 122 ~---~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~----~~~~~i~r~~~v~Gp~ 194 (355)
T PRK10217 122 D---KKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY----GLPTLITNCSNNYGPY 194 (355)
T ss_pred c---ccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCC
Confidence 0 00035899999965322 22356789999999999999987764 5888899999998765
Q ss_pred ccCCCChHHHHHhhh-hh-cC-------CCCCCCHHHHHHHHHHhccC
Q 027828 167 GVSKLAPEEIRSKAT-DY-MA-------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 167 ~~~~~~~~~~~~~~~-~~-~~-------~~~~~~~~e~a~~~~~L~s~ 205 (218)
......-..+..... .. .+ ..-+...+|+++++..++..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~ 242 (355)
T PRK10217 195 HFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT 242 (355)
T ss_pred CCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence 321111112212111 11 11 12256789999999988754
No 224
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.25 E-value=6.1e-10 Score=91.12 Aligned_cols=181 Identities=14% Similarity=0.049 Sum_probs=117.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC-CCCCCHHHH--HHHHhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP-AEDLSPNGF--RTVIEI 78 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~-~~~~~~~~~--~~~~~~ 78 (218)
+|+.++.+.+...+.. +.++.++.+|+++.+++.++++ .+|+|||+|+...... ....+.+.+ .++++.
T Consensus 41 ~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~ 112 (353)
T PLN02896 41 LRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDP 112 (353)
T ss_pred eCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHH
Confidence 3555555554444432 4568889999999998877764 5899999999754321 122233333 467788
Q ss_pred hhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC----------------c---------chhHhHHhHH
Q 027828 79 DSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------------W---------YQIHVSAAKA 133 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------------~---------~~~~y~~sK~ 133 (218)
|+.+++++++++.+.. + .++||++||...+... | ....|+.+|.
T Consensus 113 ~~~g~~~ll~~~~~~~---~--------~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~ 181 (353)
T PLN02896 113 AIKGTLNVLKSCLKSK---T--------VKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKL 181 (353)
T ss_pred HHHHHHHHHHHHHhcC---C--------ccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHH
Confidence 8899999999886531 1 3579999997654311 0 1137999999
Q ss_pred HHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCCh--HHHHHhhhhhcC-------------CCCCCCHHHHHHH
Q 027828 134 AVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMA-------------AYKFGEKWDIAMA 198 (218)
Q Consensus 134 a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~-------------~~~~~~~~e~a~~ 198 (218)
+.+.+++.++.+ +|+++..++|+.+..|........ ............ .+-+...+|+|++
T Consensus 182 ~~E~~~~~~~~~----~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a 257 (353)
T PLN02896 182 LTEEAAFKYAKE----NGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDA 257 (353)
T ss_pred HHHHHHHHHHHH----cCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHH
Confidence 999999887654 369999999999998754322211 111111111100 0124688999999
Q ss_pred HHHhccC
Q 027828 199 ALYLASD 205 (218)
Q Consensus 199 ~~~L~s~ 205 (218)
++.++..
T Consensus 258 ~~~~l~~ 264 (353)
T PLN02896 258 HIFLMEQ 264 (353)
T ss_pred HHHHHhC
Confidence 9998853
No 225
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.25 E-value=4.5e-10 Score=90.71 Aligned_cols=159 Identities=16% Similarity=0.099 Sum_probs=107.9
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|+++.+++.++++ .+|+|||+|+..... . .+.....+++|+.++.++++++... .+
T Consensus 56 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~vih~A~~~~~~-~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~- 119 (322)
T PLN02986 56 ERLKLFKADLLEESSFEQAIE-------GCDAVFHTASPVFFT-V----KDPQTELIDPALKGTINVLNTCKET---PS- 119 (322)
T ss_pred CceEEEecCCCCcchHHHHHh-------CCCEEEEeCCCcCCC-C----CCchhhhhHHHHHHHHHHHHHHHhc---CC-
Confidence 467889999999998887766 589999999964321 1 1223567899999999999887531 12
Q ss_pred CCCCCCCCceEEEeccccccc-CC----------------c-----chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee
Q 027828 100 GQASSSSGGIIINISATLHYT-AT----------------W-----YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~-~~----------------~-----~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v 157 (218)
-++||++||.++.. +. | ....|+.+|.+.+.+++.+..+ +|+++..+
T Consensus 120 -------v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~~~~~~~l 188 (322)
T PLN02986 120 -------VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD----NGIDMVVL 188 (322)
T ss_pred -------ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH----hCCeEEEE
Confidence 36899999986531 11 0 1356999999988888877554 37999999
Q ss_pred ecCcccCCCccCCC--ChHHHHHhhhhhc----CCCCCCCHHHHHHHHHHhccC
Q 027828 158 APGPIKDTAGVSKL--APEEIRSKATDYM----AAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 158 ~pG~v~t~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+|+.+.+|...... ............. ....+...+|+|++++.++..
T Consensus 189 rp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~ 242 (322)
T PLN02986 189 NPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALET 242 (322)
T ss_pred cccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcC
Confidence 99999987543211 1111111111111 112367889999999988864
No 226
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.25 E-value=3.1e-10 Score=91.10 Aligned_cols=161 Identities=20% Similarity=0.109 Sum_probs=110.7
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|++|++++.++++.. ++|+|||+|+.... +...+..+..+++|+.++..+++++...+.
T Consensus 51 ~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----- 116 (317)
T TIGR01181 51 RYRFVKGDIGDRELVSRLFTEH-----QPDAVVHFAAESHV----DRSISGPAAFIETNVVGTYTLLEAVRKYWH----- 116 (317)
T ss_pred CcEEEEcCCcCHHHHHHHHhhc-----CCCEEEEcccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-----
Confidence 5778899999999998887643 59999999996432 123345667899999999999988765322
Q ss_pred CCCCCCCceEEEecccccccC------------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCcc
Q 027828 101 QASSSSGGIIINISATLHYTA------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 168 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~------------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~ 168 (218)
..++|++||...+.. ..+...|+.+|.+.+.+++.++.+. ++++..++|+.+..+...
T Consensus 117 ------~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~~~~~i~R~~~i~G~~~~ 186 (317)
T TIGR01181 117 ------EFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY----GLPALITRCSNNYGPYQF 186 (317)
T ss_pred ------CceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh----CCCeEEEEeccccCCCCC
Confidence 246999998653221 1234579999999999999887654 589999999999876533
Q ss_pred CCCChHHHHHhhhhhcCC---------CCCCCHHHHHHHHHHhccC
Q 027828 169 SKLAPEEIRSKATDYMAA---------YKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~---------~~~~~~~e~a~~~~~L~s~ 205 (218)
.....+.+........+. .-+...+|+++++..++..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~ 232 (317)
T TIGR01181 187 PEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEK 232 (317)
T ss_pred cccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcC
Confidence 222112222222221111 1134679999999988864
No 227
>PLN02650 dihydroflavonol-4-reductase
Probab=99.24 E-value=3.3e-10 Score=92.63 Aligned_cols=158 Identities=13% Similarity=0.035 Sum_probs=108.7
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|+++.+.+..+++ .+|+|||+|+.... .. .+.+...+++|+.+++++++++.+.. .
T Consensus 57 ~~~~v~~Dl~d~~~~~~~~~-------~~d~ViH~A~~~~~---~~--~~~~~~~~~~Nv~gt~~ll~aa~~~~---~-- 119 (351)
T PLN02650 57 RLTLWKADLAVEGSFDDAIR-------GCTGVFHVATPMDF---ES--KDPENEVIKPTVNGMLSIMKACAKAK---T-- 119 (351)
T ss_pred ceEEEEecCCChhhHHHHHh-------CCCEEEEeCCCCCC---CC--CCchhhhhhHHHHHHHHHHHHHHhcC---C--
Confidence 57889999999988877765 58999999985421 11 12235678999999999999987531 1
Q ss_pred CCCCCCCceEEEecccccccCC----c------------------chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 101 QASSSSGGIIINISATLHYTAT----W------------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~----~------------------~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
.++||++||...+.+. + +...|+.+|.+.+.+++.++.+ +|++++.++
T Consensus 120 ------~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~gi~~~ilR 189 (351)
T PLN02650 120 ------VRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE----NGLDFISII 189 (351)
T ss_pred ------ceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH----cCCeEEEEC
Confidence 2579999997543210 0 1237999999999999888664 379999999
Q ss_pred cCcccCCCccCCCChHHHHH--hhhhh------cCCCCCCCHHHHHHHHHHhccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRS--KATDY------MAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
|+.+.+|............. ..... ...+.+...+|++++++.++..
T Consensus 190 p~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~ 244 (351)
T PLN02650 190 PTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEH 244 (351)
T ss_pred CCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcC
Confidence 99999886433222111111 01111 1123467899999999999864
No 228
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.19 E-value=9e-10 Score=90.02 Aligned_cols=170 Identities=16% Similarity=0.087 Sum_probs=112.3
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|++|.+++.++++. .++|+|||+|+...... ..+..+..+++|+.++.++++++.+.|.....
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~ 120 (352)
T PRK10084 50 ERYVFEHADICDRAELDRIFAQ-----HQPDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDE 120 (352)
T ss_pred CceEEEEecCCCHHHHHHHHHh-----cCCCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhcccccc
Confidence 3567889999999999888875 27999999999643211 12234678999999999999999877642210
Q ss_pred CCCCCCCCceEEEecccccccC---------------------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 100 GQASSSSGGIIINISATLHYTA---------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~---------------------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
.. ....++|++||...+.. ..+...|+.+|.+.+.+++.++.++ |+++..+.
T Consensus 121 ~~---~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----g~~~vilr 193 (352)
T PRK10084 121 DK---KNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY----GLPTIVTN 193 (352)
T ss_pred cc---ccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh----CCCEEEEe
Confidence 00 00247999999653321 1244689999999999999987764 47777788
Q ss_pred cCcccCCCccCCCChHHHHHhhhhh--cCC-------CCCCCHHHHHHHHHHhccC
Q 027828 159 PGPIKDTAGVSKLAPEEIRSKATDY--MAA-------YKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 159 pG~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~e~a~~~~~L~s~ 205 (218)
|+.+..|.......-..+....... .+. .-+...+|+++++..++..
T Consensus 194 ~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~ 249 (352)
T PRK10084 194 CSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTE 249 (352)
T ss_pred ccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhc
Confidence 8888876432111111221212111 111 1245789999999888754
No 229
>PLN02214 cinnamoyl-CoA reductase
Probab=99.18 E-value=2.8e-09 Score=86.88 Aligned_cols=154 Identities=11% Similarity=0.023 Sum_probs=107.3
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|+++.+++..+++ ++|+|||+|+... +++...+++|+.++.++++++.. .+
T Consensus 60 ~~~~~~~~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~~----~~- 118 (342)
T PLN02214 60 ERLILCKADLQDYEALKAAID-------GCDGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAAE----AK- 118 (342)
T ss_pred CcEEEEecCcCChHHHHHHHh-------cCCEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHHh----cC-
Confidence 357889999999998877765 5899999998531 23567899999999999998864 23
Q ss_pred CCCCCCCCceEEEecccccccCC----c-----------------chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 100 GQASSSSGGIIINISATLHYTAT----W-----------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~----~-----------------~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
-++||++||..+..+. + ....|+.+|.+.+.+++.++.+ +|+++..++
T Consensus 119 -------v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~----~g~~~v~lR 187 (342)
T PLN02214 119 -------VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE----KGVDLVVLN 187 (342)
T ss_pred -------CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHH----cCCcEEEEe
Confidence 3689999997543211 0 2346999999999998887654 369999999
Q ss_pred cCcccCCCccCCCC--hHHHHHhhhhhcC-----CCCCCCHHHHHHHHHHhccC
Q 027828 159 PGPIKDTAGVSKLA--PEEIRSKATDYMA-----AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 159 pG~v~t~~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~~e~a~~~~~L~s~ 205 (218)
|+.+..|....... ...+...+....+ .+-+...+|+|++++.++..
T Consensus 188 p~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~ 241 (342)
T PLN02214 188 PVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEA 241 (342)
T ss_pred CCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhC
Confidence 99999875432111 1111121111111 11245789999999988854
No 230
>PLN02583 cinnamoyl-CoA reductase
Probab=99.16 E-value=1.8e-09 Score=86.30 Aligned_cols=156 Identities=8% Similarity=-0.059 Sum_probs=104.9
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
+.++.++.+|++|.+++.+++. ..|+++|.++.... .. ..++..+++|+.+++++++++.+.+ +
T Consensus 56 ~~~~~~~~~Dl~d~~~~~~~l~-------~~d~v~~~~~~~~~-----~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~ 119 (297)
T PLN02583 56 EERLKVFDVDPLDYHSILDALK-------GCSGLFCCFDPPSD-----YP-SYDEKMVDVEVRAAHNVLEACAQTD---T 119 (297)
T ss_pred CCceEEEEecCCCHHHHHHHHc-------CCCEEEEeCccCCc-----cc-ccHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 4468889999999988765543 57888886653221 11 2467899999999999999987643 1
Q ss_pred CCCCCCCCCceEEEecccccccCC----------------cch------hHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 99 RGQASSSSGGIIINISATLHYTAT----------------WYQ------IHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~~----------------~~~------~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
.++||++||.++.... +.. ..|+.+|...+.+++.++.+ +|++++.
T Consensus 120 --------v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~----~gi~~v~ 187 (297)
T PLN02583 120 --------IEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD----RGVNMVS 187 (297)
T ss_pred --------ccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH----hCCcEEE
Confidence 3679999998654210 000 15899999888888777543 3799999
Q ss_pred eecCcccCCCccCCCChHHHHHhhhhhcC--CCCCCCHHHHHHHHHHhccC
Q 027828 157 IAPGPIKDTAGVSKLAPEEIRSKATDYMA--AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 157 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~e~a~~~~~L~s~ 205 (218)
|+|+.+.++...... . .........+ ...+...+|+|++.+..+..
T Consensus 188 lrp~~v~Gp~~~~~~--~-~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~ 235 (297)
T PLN02583 188 INAGLLMGPSLTQHN--P-YLKGAAQMYENGVLVTVDVNFLVDAHIRAFED 235 (297)
T ss_pred EcCCcccCCCCCCch--h-hhcCCcccCcccCcceEEHHHHHHHHHHHhcC
Confidence 999999987543211 1 1110000001 11256789999999988863
No 231
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.14 E-value=2.5e-09 Score=87.08 Aligned_cols=164 Identities=16% Similarity=0.084 Sum_probs=105.6
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
+.++.++.+|++|.+++..+++.+ .+|+|||+|+..... ...+.....+++|+.++.++++++.+...+++
T Consensus 59 ~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~ 129 (340)
T PLN02653 59 KARMKLHYGDLSDASSLRRWLDDI-----KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETG 129 (340)
T ss_pred cCceEEEEecCCCHHHHHHHHHHc-----CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 345788999999999998888864 589999999975422 12234567788999999999999988755421
Q ss_pred CCCCCCCCCceEEEecccccccC----------CcchhHhHHhHHHHHHHHHHHHhhhcCC---CCeEEeeeecCcccCC
Q 027828 99 RGQASSSSGGIIINISATLHYTA----------TWYQIHVSAAKAAVDSITRSLALEWGTD---YAIRVNGIAPGPIKDT 165 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~----------~~~~~~y~~sK~a~~~~~~~la~el~~~---~gi~v~~v~pG~v~t~ 165 (218)
. ..++|++||...+.. ..+...|+.+|.+.+.+++.++.++. - .++.++.+.|+...+
T Consensus 130 ~-------~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~~~~~~~~~gp~~~~~- 200 (340)
T PLN02653 130 R-------QIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYG-LFACNGILFNHESPRRGEN- 200 (340)
T ss_pred c-------ceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcC-CeEEEeeeccccCCCCCcc-
Confidence 0 136889988643322 12356799999999999999887653 1 123334444442211
Q ss_pred CccCCCChHHH---HHhhhhh----c------CCCCCCCHHHHHHHHHHhccC
Q 027828 166 AGVSKLAPEEI---RSKATDY----M------AAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 166 ~~~~~~~~~~~---~~~~~~~----~------~~~~~~~~~e~a~~~~~L~s~ 205 (218)
.....+ ....... . ..+-+...+|+|++++.++..
T Consensus 201 -----~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~ 248 (340)
T PLN02653 201 -----FVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQ 248 (340)
T ss_pred -----cchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhc
Confidence 111111 1111111 1 112346789999999998864
No 232
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.13 E-value=1.6e-09 Score=91.13 Aligned_cols=127 Identities=11% Similarity=0.058 Sum_probs=96.0
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|++|.+.+.++++.. ++|+|||+|+... .+....++++++..+++|+.+++++++++... +.
T Consensus 113 ~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv 182 (442)
T PLN02572 113 KEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----AP 182 (442)
T ss_pred CcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CC
Confidence 46889999999999998888763 6999999997533 23334455667788899999999999987642 20
Q ss_pred CCCCCCCCceEEEecccccccC------------------------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 100 GQASSSSGGIIINISATLHYTA------------------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~------------------------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
..++|++||...+.. ..+...|+.+|.+.+.+++..+.. +|+.+.
T Consensus 183 -------~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~----~gl~~v 251 (442)
T PLN02572 183 -------DCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA----WGIRAT 251 (442)
T ss_pred -------CccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh----cCCCEE
Confidence 247999999764421 112357999999999888876553 479999
Q ss_pred eeecCcccCCCc
Q 027828 156 GIAPGPIKDTAG 167 (218)
Q Consensus 156 ~v~pG~v~t~~~ 167 (218)
.++|+.+..+..
T Consensus 252 ~lR~~~vyGp~~ 263 (442)
T PLN02572 252 DLNQGVVYGVRT 263 (442)
T ss_pred EEecccccCCCC
Confidence 999999998753
No 233
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.12 E-value=5.7e-09 Score=84.88 Aligned_cols=158 Identities=15% Similarity=0.072 Sum_probs=107.2
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|++|.+++.+++. ++|+|||+|+... ... .+.+...+++|+.++.++++++.+. .+
T Consensus 60 ~~~~~~~Dl~d~~~~~~~~~-------~~d~vih~A~~~~---~~~--~~~~~~~~~~nv~g~~~ll~a~~~~---~~-- 122 (338)
T PLN00198 60 DLKIFGADLTDEESFEAPIA-------GCDLVFHVATPVN---FAS--EDPENDMIKPAIQGVHNVLKACAKA---KS-- 122 (338)
T ss_pred ceEEEEcCCCChHHHHHHHh-------cCCEEEEeCCCCc---cCC--CChHHHHHHHHHHHHHHHHHHHHhc---CC--
Confidence 57889999999988777654 5899999998431 111 1234567899999999999998653 12
Q ss_pred CCCCCCCceEEEecccccccCC------------------------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 101 QASSSSGGIIINISATLHYTAT------------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~------------------------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
.++||++||...+... ++...|+.+|.+.+.+++.++.+ +|+.+..
T Consensus 123 ------~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~ 192 (338)
T PLN00198 123 ------VKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE----NNIDLIT 192 (338)
T ss_pred ------ccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh----cCceEEE
Confidence 3689999998654311 23456999999999998887654 4699999
Q ss_pred eecCcccCCCccCCCCh--HHHHHhhhhh---------cC----CCCCCCHHHHHHHHHHhccC
Q 027828 157 IAPGPIKDTAGVSKLAP--EEIRSKATDY---------MA----AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 157 v~pG~v~t~~~~~~~~~--~~~~~~~~~~---------~~----~~~~~~~~e~a~~~~~L~s~ 205 (218)
++|+.+.+|........ .......... .+ ..-+...+|++++++.++..
T Consensus 193 ~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~ 256 (338)
T PLN00198 193 VIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEK 256 (338)
T ss_pred EeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence 99999998753211110 0011111110 01 02357889999999998864
No 234
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.03 E-value=8.3e-09 Score=83.22 Aligned_cols=159 Identities=13% Similarity=0.084 Sum_probs=106.3
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|+++++++..+++ ++|+|||+|+..... . .+.....+++|+.++.++++++.... +
T Consensus 55 ~~~~~~~~Dl~~~~~~~~~~~-------~~d~Vih~A~~~~~~--~---~~~~~~~~~~nv~gt~~ll~a~~~~~---~- 118 (322)
T PLN02662 55 ERLHLFKANLLEEGSFDSVVD-------GCEGVFHTASPFYHD--V---TDPQAELIDPAVKGTLNVLRSCAKVP---S- 118 (322)
T ss_pred CceEEEeccccCcchHHHHHc-------CCCEEEEeCCcccCC--C---CChHHHHHHHHHHHHHHHHHHHHhCC---C-
Confidence 367889999999988777665 589999999854211 1 11124688999999999999976421 2
Q ss_pred CCCCCCCCceEEEeccccc--ccCC---------------cc-----hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee
Q 027828 100 GQASSSSGGIIINISATLH--YTAT---------------WY-----QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~--~~~~---------------~~-----~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v 157 (218)
-.+||++||.++ +.+. |. ...|+.+|.+.+.+++.+..+ +|+++..+
T Consensus 119 -------~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~l 187 (322)
T PLN02662 119 -------VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE----NGIDMVTI 187 (322)
T ss_pred -------CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH----cCCcEEEE
Confidence 357999999763 2111 10 136999999988888776543 47999999
Q ss_pred ecCcccCCCccCC--CChHHHHHhhhhh--cC--CCCCCCHHHHHHHHHHhccC
Q 027828 158 APGPIKDTAGVSK--LAPEEIRSKATDY--MA--AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 158 ~pG~v~t~~~~~~--~~~~~~~~~~~~~--~~--~~~~~~~~e~a~~~~~L~s~ 205 (218)
+|+.+.+|..... .......+..... .+ ...+...+|+|++++.++..
T Consensus 188 Rp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 241 (322)
T PLN02662 188 NPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEI 241 (322)
T ss_pred eCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcC
Confidence 9999998754321 1111222211111 11 12357889999999988864
No 235
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.03 E-value=1.6e-08 Score=78.90 Aligned_cols=153 Identities=13% Similarity=0.028 Sum_probs=91.9
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHh-CCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHF-GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
.++.++.+|+++.. ..+.+ .+ .++|+||+++|....... ...+++|..++..+++++. +.+
T Consensus 62 ~~~~~~~~Dl~d~~--~~l~~----~~~~~~d~vi~~~g~~~~~~~--------~~~~~~n~~~~~~ll~a~~----~~~ 123 (251)
T PLN00141 62 PSLQIVRADVTEGS--DKLVE----AIGDDSDAVICATGFRRSFDP--------FAPWKVDNFGTVNLVEACR----KAG 123 (251)
T ss_pred CceEEEEeeCCCCH--HHHHH----HhhcCCCEEEECCCCCcCCCC--------CCceeeehHHHHHHHHHHH----HcC
Confidence 45888999999842 12222 22 379999999986421110 1124678888888888863 333
Q ss_pred CCCCCCCCCceEEEeccccccc---CCcchhHhHHhHHHHHHHH-HHHHhh-hcCCCCeEEeeeecCcccCCCccCCCCh
Q 027828 99 RGQASSSSGGIIINISATLHYT---ATWYQIHVSAAKAAVDSIT-RSLALE-WGTDYAIRVNGIAPGPIKDTAGVSKLAP 173 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~sK~a~~~~~-~~la~e-l~~~~gi~v~~v~pG~v~t~~~~~~~~~ 173 (218)
.++||++||.+.+. +.+....|...|.+...+. +..+.+ +. .+|++++.|+||++.++........
T Consensus 124 --------~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~-~~gi~~~iirpg~~~~~~~~~~~~~ 194 (251)
T PLN00141 124 --------VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIR-KSGINYTIVRPGGLTNDPPTGNIVM 194 (251)
T ss_pred --------CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHH-hcCCcEEEEECCCccCCCCCceEEE
Confidence 57899999986432 2223345665555443333 333332 45 6799999999999986542211100
Q ss_pred HHHHHhhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 174 EEIRSKATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
...........+++|+|+.+..++..
T Consensus 195 ------~~~~~~~~~~i~~~dvA~~~~~~~~~ 220 (251)
T PLN00141 195 ------EPEDTLYEGSISRDQVAEVAVEALLC 220 (251)
T ss_pred ------CCCCccccCcccHHHHHHHHHHHhcC
Confidence 00000112356999999999999864
No 236
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.03 E-value=1.4e-08 Score=78.73 Aligned_cols=162 Identities=22% Similarity=0.137 Sum_probs=115.5
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++++|+.|.+.+.+++.+- ++|+|+|-|+-..... +..+-...+++|+.|++.++.++..+..+
T Consensus 51 ~~~~fv~~DI~D~~~v~~~~~~~-----~~D~VvhfAAESHVDR----SI~~P~~Fi~TNv~GT~~LLEaar~~~~~--- 118 (340)
T COG1088 51 PRYRFVQGDICDRELVDRLFKEY-----QPDAVVHFAAESHVDR----SIDGPAPFIQTNVVGTYTLLEAARKYWGK--- 118 (340)
T ss_pred CCceEEeccccCHHHHHHHHHhc-----CCCeEEEechhccccc----cccChhhhhhcchHHHHHHHHHHHHhccc---
Confidence 47899999999999999888763 7999999999665433 23334567899999999999999876543
Q ss_pred CCCCCCCCceEEEecccccc-------------cCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCC
Q 027828 100 GQASSSSGGIIINISATLHY-------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~-------------~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~ 166 (218)
-+++.||.-.-+ .++.+.+.|++|||+-+.+++++.+-+ |+.+...++..-..|.
T Consensus 119 --------frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY----glp~~ItrcSNNYGPy 186 (340)
T COG1088 119 --------FRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY----GLPATITRCSNNYGPY 186 (340)
T ss_pred --------ceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc----CCceEEecCCCCcCCC
Confidence 248999875422 245678899999999999999997754 6899888887777665
Q ss_pred ccCC-CChHHHHHhhhhh-cCC-------CCCCCHHHHHHHHHHhccC
Q 027828 167 GVSK-LAPEEIRSKATDY-MAA-------YKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 167 ~~~~-~~~~~~~~~~~~~-~~~-------~~~~~~~e~a~~~~~L~s~ 205 (218)
...+ ..|......+..+ +|. +-+...+|-+.++..++..
T Consensus 187 qfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~k 234 (340)
T COG1088 187 QFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTK 234 (340)
T ss_pred cCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhc
Confidence 4432 2222222222222 121 1234568888888877754
No 237
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=99.03 E-value=1.1e-08 Score=80.47 Aligned_cols=139 Identities=15% Similarity=0.085 Sum_probs=113.1
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhC--------------CccEEEeCCCCC-CCCCCCCCCHHHHHHHHhhhhhhHH
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFG--------------KLDILVNAAAGN-FLVPAEDLSPNGFRTVIEIDSVGTF 84 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~--------------~ld~li~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~ 84 (218)
..+.....|..++.++...+..+.+.+. .+..||...... ..++++.++.+.|.+.++.|+..++
T Consensus 50 ~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~ 129 (299)
T PF08643_consen 50 PDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPI 129 (299)
T ss_pred CCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHH
Confidence 4577788888888888888777776554 456677666633 4588999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEec-ccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 85 IMCHEALKYLKKGGRGQASSSSGGIIINIS-ATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~is-s~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
.+++.++|+++.+... +.+||.+. |.......|+.+.-.+..+++.++++.|++|+. +++|.|..++.|.++
T Consensus 130 ~~~q~lLPlL~~~~~~------~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~-~~~I~V~~i~LG~l~ 202 (299)
T PF08643_consen 130 LTIQGLLPLLRSRSNQ------KSKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSLRRELR-PHNIDVTQIKLGNLD 202 (299)
T ss_pred HHHHHHHHHHHhccCC------CceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhh-hcCCceEEEEeeeec
Confidence 9999999999982200 45566555 666677888999999999999999999999998 999999999999887
Q ss_pred CC
Q 027828 164 DT 165 (218)
Q Consensus 164 t~ 165 (218)
-.
T Consensus 203 i~ 204 (299)
T PF08643_consen 203 IG 204 (299)
T ss_pred cc
Confidence 55
No 238
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.98 E-value=2.9e-08 Score=80.88 Aligned_cols=109 Identities=17% Similarity=0.082 Sum_probs=80.2
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|++|.+++.++++.. ++|+|||+|+...... ..+.-...+++|+.++.++++++.+.-.++
T Consensus 55 ~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~-- 123 (343)
T TIGR01472 55 ARMKLHYGDLTDSSNLRRIIDEI-----KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLIK-- 123 (343)
T ss_pred cceeEEEeccCCHHHHHHHHHhC-----CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCCc--
Confidence 45788999999999998888764 5899999999654321 112234667889999999999987631111
Q ss_pred CCCCCCCCceEEEeccccccc-----------CCcchhHhHHhHHHHHHHHHHHHhhh
Q 027828 100 GQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEW 146 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sK~a~~~~~~~la~el 146 (218)
..++|++||...+. +..+...|+.+|.+.+.+++.++.++
T Consensus 124 -------~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 174 (343)
T TIGR01472 124 -------SVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAY 174 (343)
T ss_pred -------CeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 24799999975432 12245689999999999999988765
No 239
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=98.98 E-value=3.9e-08 Score=69.72 Aligned_cols=167 Identities=19% Similarity=0.075 Sum_probs=112.1
Q ss_pred ecCCCHHHHHHHHHHHHHHh--CCccEEEeCCCCCCCCCCCCCC-HHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCC
Q 027828 27 GDVRKREDAVRVVESTINHF--GKLDILVNAAAGNFLVPAEDLS-PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 103 (218)
Q Consensus 27 ~D~s~~~~~~~~~~~~~~~~--~~ld~li~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 103 (218)
.|-+=-|+-+++.+++-+.+ .++|.++|.||.+....-..-+ ...-+-++.-.+.......+.+..+++.
T Consensus 49 ~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~------- 121 (236)
T KOG4022|consen 49 GNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP------- 121 (236)
T ss_pred CCcchhHHHHHHHHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC-------
Confidence 33333556667777776654 3899999999976543211100 1223345566667777777777777776
Q ss_pred CCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhc-CCCCeEEeeeecCcccCCCccCCCChHHHHHhhhh
Q 027828 104 SSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD 182 (218)
Q Consensus 104 ~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~-~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~ 182 (218)
.|-+-....-.+..+.|++..|+++|+|+..++++|+.+-. -+.|--+..|.|-..+|||..+.++..++.
T Consensus 122 ---GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADfs----- 193 (236)
T KOG4022|consen 122 ---GGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADFS----- 193 (236)
T ss_pred ---CceeeecccccccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCccc-----
Confidence 56677777777888999999999999999999999998632 245778899999999999988777554321
Q ss_pred hcCCCCCCCHHHHHHHHHHhccCCCcccccc
Q 027828 183 YMAAYKFGEKWDIAMAALYLASDAAVHRDLI 213 (218)
Q Consensus 183 ~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~ 213 (218)
.+...+++++....-..+..+--+|.
T Consensus 194 -----sWTPL~fi~e~flkWtt~~~RPssGs 219 (236)
T KOG4022|consen 194 -----SWTPLSFISEHFLKWTTETSRPSSGS 219 (236)
T ss_pred -----CcccHHHHHHHHHHHhccCCCCCCCc
Confidence 13334566666554444444444443
No 240
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.97 E-value=3.5e-09 Score=83.05 Aligned_cols=174 Identities=18% Similarity=0.138 Sum_probs=117.0
Q ss_pred CCcHHHHHHHHHHHHhc--CCCe----eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 027828 2 GRRKTVLRSAVAALHSL--GIPA----IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 75 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~--~~~~----~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~ 75 (218)
+|++.++-.+..++++. +.++ ..+.+|+.|.+.+..++++. ++|+|+|.|+.-.....+. ...+.
T Consensus 30 d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-----~pdiVfHaAA~KhVpl~E~----~p~ea 100 (293)
T PF02719_consen 30 DRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-----KPDIVFHAAALKHVPLMED----NPFEA 100 (293)
T ss_dssp ES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-------T-SEEEE------HHHHCC----CHHHH
T ss_pred CCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-----CCCEEEEChhcCCCChHHh----CHHHH
Confidence 68888999999998643 2234 34689999999998888754 8999999999765433333 23567
Q ss_pred HhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEe
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~ 155 (218)
+++|+.|+.++.+++..+ + -.++|+||+-=+.. +...||++|...+.++.+.+.... ..+.++.
T Consensus 101 v~tNv~GT~nv~~aa~~~----~--------v~~~v~ISTDKAv~---PtnvmGatKrlaE~l~~~~~~~~~-~~~t~f~ 164 (293)
T PF02719_consen 101 VKTNVLGTQNVAEAAIEH----G--------VERFVFISTDKAVN---PTNVMGATKRLAEKLVQAANQYSG-NSDTKFS 164 (293)
T ss_dssp HHHHCHHHHHHHHHHHHT----T---------SEEEEEEECGCSS-----SHHHHHHHHHHHHHHHHCCTSS-SS--EEE
T ss_pred HHHHHHHHHHHHHHHHHc----C--------CCEEEEccccccCC---CCcHHHHHHHHHHHHHHHHhhhCC-CCCcEEE
Confidence 899999999999999753 3 45799999976544 557899999999999999988875 6678999
Q ss_pred eeecCcccCCCccCCCChHHHHHhhhhhcCC--------CCCCCHHHHHHHHHHhc
Q 027828 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDIAMAALYLA 203 (218)
Q Consensus 156 ~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~e~a~~~~~L~ 203 (218)
+|+=|.|.. .....-+-+.++....-|+ +.+.+++|.++.++..+
T Consensus 165 ~VRFGNVlg---S~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~ 217 (293)
T PF02719_consen 165 SVRFGNVLG---SRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAA 217 (293)
T ss_dssp EEEE-EETT---GTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHH
T ss_pred EEEecceec---CCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHH
Confidence 999998863 2333445566666655443 33578899998888665
No 241
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.91 E-value=8.8e-08 Score=77.29 Aligned_cols=156 Identities=17% Similarity=0.104 Sum_probs=105.0
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
.+.++.+|+++.+++.++++ .+|+|||+++.... ..+..+..+++|+.++..+.+++.. .+
T Consensus 44 ~~~~~~~D~~~~~~l~~~~~-------~~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-- 104 (328)
T TIGR03466 44 DVEIVEGDLRDPASLRKAVA-------GCRALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAALE----AG-- 104 (328)
T ss_pred CceEEEeeCCCHHHHHHHHh-------CCCEEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHHH----hC--
Confidence 46788999999988877665 68999999985321 1223567888999999999888753 22
Q ss_pred CCCCCCCceEEEecccccccCCc---------------chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCC
Q 027828 101 QASSSSGGIIINISATLHYTATW---------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~~---------------~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~ 165 (218)
.+++|++||...+...+ ....|+.+|.+.+.+++.++.+ +|+++..++|+.+.++
T Consensus 105 ------~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~~~G~ 174 (328)
T TIGR03466 105 ------VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE----KGLPVVIVNPSTPIGP 174 (328)
T ss_pred ------CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh----cCCCEEEEeCCccCCC
Confidence 46899999976543211 1347999999999998887553 3689999999999866
Q ss_pred CccCCCChHHH-HHhhhhhcCC-----CCCCCHHHHHHHHHHhccC
Q 027828 166 AGVSKLAPEEI-RSKATDYMAA-----YKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 166 ~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~e~a~~~~~L~s~ 205 (218)
........... ........+. ..+...+|+|+++..++..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~ 220 (328)
T TIGR03466 175 RDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALER 220 (328)
T ss_pred CCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhC
Confidence 43222111111 1111111111 1245689999998887754
No 242
>PLN02240 UDP-glucose 4-epimerase
Probab=98.90 E-value=7e-08 Score=78.84 Aligned_cols=122 Identities=17% Similarity=0.074 Sum_probs=89.0
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
+.++.++.+|+++++++..+++.. .+|+|||+|+..... .+.+++...+++|+.++.++++++. +.+
T Consensus 57 ~~~~~~~~~D~~~~~~l~~~~~~~-----~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~ 123 (352)
T PLN02240 57 GDNLVFHKVDLRDKEALEKVFAST-----RFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVMA----KHG 123 (352)
T ss_pred CccceEEecCcCCHHHHHHHHHhC-----CCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHHH----HcC
Confidence 346788999999999998887652 799999999965321 1234567889999999999988653 333
Q ss_pred CCCCCCCCCceEEEecccccccC-----------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccC
Q 027828 99 RGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t 164 (218)
.+++|++||...+.. ..+...|+.+|.+.+.+++.++.+ ..++.+..++++.+..
T Consensus 124 --------~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~~R~~~v~G 189 (352)
T PLN02240 124 --------CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHAS---DPEWKIILLRYFNPVG 189 (352)
T ss_pred --------CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeecCcCC
Confidence 367999999653321 124568999999999999988754 2357777777765543
No 243
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.88 E-value=2.2e-07 Score=75.97 Aligned_cols=157 Identities=17% Similarity=0.109 Sum_probs=101.3
Q ss_pred CCeeEEEecCCCHH------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHH
Q 027828 20 IPAIGLEGDVRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93 (218)
Q Consensus 20 ~~~~~~~~D~s~~~------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 93 (218)
.++.++.+|++++. ....+ ...+|+|||+|+..... ..++...++|+.++..+++++..
T Consensus 61 ~~v~~~~~D~~~~~~gl~~~~~~~~-------~~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a~~- 125 (367)
T TIGR01746 61 ERIEVVAGDLSEPRLGLSDAEWERL-------AENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLAAS- 125 (367)
T ss_pred CCEEEEeCCcCcccCCcCHHHHHHH-------HhhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHHhh-
Confidence 36888999998753 22222 24799999999964321 12566778999999998887653
Q ss_pred HHhcCCCCCCCCCCceEEEecccccccCC----------------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee
Q 027828 94 LKKGGRGQASSSSGGIIINISATLHYTAT----------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157 (218)
Q Consensus 94 ~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v 157 (218)
.+ ..++|++||....... .....|+.+|++.+.+++.++ ..|++++.+
T Consensus 126 ---~~--------~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~-----~~g~~~~i~ 189 (367)
T TIGR01746 126 ---GR--------AKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREAS-----DRGLPVTIV 189 (367)
T ss_pred ---CC--------CceEEEEccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHH-----hcCCCEEEE
Confidence 22 3459999998765431 113469999999998887643 338999999
Q ss_pred ecCcccCCCccCCCChHHHHH-hhh-----hhcCC-----CCCCCHHHHHHHHHHhccCCC
Q 027828 158 APGPIKDTAGVSKLAPEEIRS-KAT-----DYMAA-----YKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 158 ~pG~v~t~~~~~~~~~~~~~~-~~~-----~~~~~-----~~~~~~~e~a~~~~~L~s~~~ 207 (218)
+||.+.++..........+.. ... ...|. .-+...++++++++.++....
T Consensus 190 Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~ 250 (367)
T TIGR01746 190 RPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPA 250 (367)
T ss_pred CCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCC
Confidence 999998753222222112111 111 11121 114677999999999886543
No 244
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.86 E-value=5e-08 Score=78.56 Aligned_cols=122 Identities=18% Similarity=0.058 Sum_probs=90.5
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|+++.+++.+++.. +++|++||++|...... ..++....++.|+.++..+++++. +.+
T Consensus 48 ~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~-- 112 (328)
T TIGR01179 48 RVTFVEGDLRDRELLDRLFEE-----HKIDAVIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAMQ----QTG-- 112 (328)
T ss_pred ceEEEECCCCCHHHHHHHHHh-----CCCcEEEECccccCcch----hhcCchhhhhhhHHHHHHHHHHHH----hcC--
Confidence 466889999999998888763 47999999999654322 223345678899999999988754 333
Q ss_pred CCCCCCCceEEEecccccccCC-----------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCC
Q 027828 101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~ 166 (218)
.+++|++||...+... .+...|+.+|++.+.+++.++.+. .++++..++|+.+..+.
T Consensus 113 ------~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~---~~~~~~ilR~~~v~g~~ 180 (328)
T TIGR01179 113 ------VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKAD---PGLSYVILRYFNVAGAD 180 (328)
T ss_pred ------CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhc---cCCCEEEEecCcccCCC
Confidence 4689999986543211 134679999999999999987652 37899999998887653
No 245
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.85 E-value=2.4e-07 Score=77.94 Aligned_cols=174 Identities=18% Similarity=0.112 Sum_probs=126.5
Q ss_pred CCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
+|++-++..+..+++.. ..++.++-+|+.|.+.+..+++.. ++|+|+|.|+.-+....+.. ..+.+++|
T Consensus 282 ~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-----kvd~VfHAAA~KHVPl~E~n----P~Eai~tN 352 (588)
T COG1086 282 SRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-----KVDIVFHAAALKHVPLVEYN----PEEAIKTN 352 (588)
T ss_pred cCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-----CCceEEEhhhhccCcchhcC----HHHHHHHh
Confidence 68888999999999875 367889999999999999998854 79999999997664433333 34678899
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.|+.+...++... + -.++|++|+--+.. +...||++|...+.++.+++.... ..+-++.+|+=
T Consensus 353 V~GT~nv~~aa~~~----~--------V~~~V~iSTDKAV~---PtNvmGaTKr~aE~~~~a~~~~~~-~~~T~f~~VRF 416 (588)
T COG1086 353 VLGTENVAEAAIKN----G--------VKKFVLISTDKAVN---PTNVMGATKRLAEKLFQAANRNVS-GTGTRFCVVRF 416 (588)
T ss_pred hHhHHHHHHHHHHh----C--------CCEEEEEecCcccC---CchHhhHHHHHHHHHHHHHhhccC-CCCcEEEEEEe
Confidence 99999999999753 2 35699999976554 456899999999999999988765 44688999998
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCC--------CCCCCHHHHHHHHHHhc
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAA--------YKFGEKWDIAMAALYLA 203 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~e~a~~~~~L~ 203 (218)
|.|-...+ ..-+-+.++..+.-|. +.+++-.|.++.++.-.
T Consensus 417 GNVlGSrG---SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~ 465 (588)
T COG1086 417 GNVLGSRG---SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAG 465 (588)
T ss_pred cceecCCC---CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHH
Confidence 88864322 2223333333333322 22345566666665443
No 246
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=98.85 E-value=1.5e-07 Score=74.80 Aligned_cols=177 Identities=12% Similarity=0.069 Sum_probs=118.3
Q ss_pred CCcHHHHHH--HHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh
Q 027828 2 GRRKTVLRS--AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 2 ~R~~~~l~~--~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n 79 (218)
.|++++.++ ....+...+.+...+.+|+++++++...++ +.|+|+|.|......... .-.+.++..
T Consensus 37 VR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------gcdgVfH~Asp~~~~~~~-----~e~~li~pa 104 (327)
T KOG1502|consen 37 VRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------GCDGVFHTASPVDFDLED-----PEKELIDPA 104 (327)
T ss_pred EcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------CCCEEEEeCccCCCCCCC-----cHHhhhhHH
Confidence 467776444 355555555678999999999999999888 689999999854432211 123689999
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC-c-----------ch----------hHhHHhHHHHHH
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT-W-----------YQ----------IHVSAAKAAVDS 137 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-~-----------~~----------~~y~~sK~a~~~ 137 (218)
+.|+.+.++++...- . -.|||++||.++.... + .| ..|+.+|.-.
T Consensus 105 v~Gt~nVL~ac~~~~---s--------VkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lA-- 171 (327)
T KOG1502|consen 105 VKGTKNVLEACKKTK---S--------VKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLA-- 171 (327)
T ss_pred HHHHHHHHHHHhccC---C--------cceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHH--
Confidence 999999999986532 1 3679999999987533 1 11 2366666543
Q ss_pred HHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCCh--HHHHHhhhhhcC----CC-CCCCHHHHHHHHHHhccC
Q 027828 138 ITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAP--EEIRSKATDYMA----AY-KFGEKWDIAMAALYLASD 205 (218)
Q Consensus 138 ~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~----~~-~~~~~~e~a~~~~~L~s~ 205 (218)
+..|.+++.+.|+....|+||.|..|..+..... ....+.+..... .. .+....|+|.+-++++..
T Consensus 172 --EkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~ 244 (327)
T KOG1502|consen 172 --EKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEK 244 (327)
T ss_pred --HHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcC
Confidence 3344444434579999999999998877764322 222222222121 11 246789999999999864
No 247
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.83 E-value=1.9e-07 Score=76.38 Aligned_cols=157 Identities=14% Similarity=0.034 Sum_probs=104.9
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|+.|.+.+..+++ .+|+|||.|+...... ..++....+++|+.++.++++++.. .+
T Consensus 70 ~~~~~~~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~nll~~~~~----~~-- 132 (348)
T PRK15181 70 RFIFIQGDIRKFTDCQKACK-------NVDYVLHQAALGSVPR----SLKDPIATNSANIDGFLNMLTAARD----AH-- 132 (348)
T ss_pred ceEEEEccCCCHHHHHHHhh-------CCCEEEECccccCchh----hhhCHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence 57788999999888776664 5899999999643211 1122345688999999999988743 33
Q ss_pred CCCCCCCceEEEecccccccCC-----------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccC
Q 027828 101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 169 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~ 169 (218)
-.++|++||...+... .+...|+.+|.+.+.+++.++.+ +|+++..++|+.+..|....
T Consensus 133 ------~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~~lR~~~vyGp~~~~ 202 (348)
T PRK15181 133 ------VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARS----YEFNAIGLRYFNVFGRRQNP 202 (348)
T ss_pred ------CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH----hCCCEEEEEecceeCcCCCC
Confidence 3579999987544311 13457999999999998887543 36999999999998774322
Q ss_pred C----CChHHHHHhhhhhcCC---------CCCCCHHHHHHHHHHhcc
Q 027828 170 K----LAPEEIRSKATDYMAA---------YKFGEKWDIAMAALYLAS 204 (218)
Q Consensus 170 ~----~~~~~~~~~~~~~~~~---------~~~~~~~e~a~~~~~L~s 204 (218)
. ..-+.+........+. +-+...+|++++++.++.
T Consensus 203 ~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~ 250 (348)
T PRK15181 203 NGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSAT 250 (348)
T ss_pred CCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHh
Confidence 1 1112222222211111 123567999999887664
No 248
>PLN02686 cinnamoyl-CoA reductase
Probab=98.83 E-value=3.7e-07 Score=75.16 Aligned_cols=157 Identities=7% Similarity=-0.027 Sum_probs=102.0
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|++|.+++.++++ .+|.++|.++.......... .....++|+.++.++++++... .+
T Consensus 108 ~~~~v~~Dl~d~~~l~~~i~-------~~d~V~hlA~~~~~~~~~~~----~~~~~~~nv~gt~~llea~~~~---~~-- 171 (367)
T PLN02686 108 GIWTVMANLTEPESLHEAFD-------GCAGVFHTSAFVDPAGLSGY----TKSMAELEAKASENVIEACVRT---ES-- 171 (367)
T ss_pred ceEEEEcCCCCHHHHHHHHH-------hccEEEecCeeecccccccc----cchhhhhhHHHHHHHHHHHHhc---CC--
Confidence 47789999999999888776 46899998886543221111 1234567888888888886531 12
Q ss_pred CCCCCCCceEEEeccccc-cc------C----------------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee
Q 027828 101 QASSSSGGIIINISATLH-YT------A----------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI 157 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~-~~------~----------------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v 157 (218)
-.++|++||..+ .. . ..+...|+.+|.+.+.+++.++.+ +|++++.+
T Consensus 172 ------v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~gl~~v~l 241 (367)
T PLN02686 172 ------VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG----KGLKLATI 241 (367)
T ss_pred ------ccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh----cCceEEEE
Confidence 357999999631 10 0 012346999999999999887654 47999999
Q ss_pred ecCcccCCCccCCCChHHHHHhhhhhcCC---C--CCCCHHHHHHHHHHhcc
Q 027828 158 APGPIKDTAGVSKLAPEEIRSKATDYMAA---Y--KFGEKWDIAMAALYLAS 204 (218)
Q Consensus 158 ~pG~v~t~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~e~a~~~~~L~s 204 (218)
+|+.+.+|...... +...........+. + .+...+|++++++.++.
T Consensus 242 Rp~~vyGp~~~~~~-~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~ 292 (367)
T PLN02686 242 CPALVTGPGFFRRN-STATIAYLKGAQEMLADGLLATADVERLAEAHVCVYE 292 (367)
T ss_pred cCCceECCCCCCCC-ChhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence 99999988533211 11111111111111 1 25678999999988875
No 249
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.81 E-value=1.2e-07 Score=72.78 Aligned_cols=162 Identities=19% Similarity=0.150 Sum_probs=113.8
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|+.+.+.++++++.. .+|.|||.|+.... ....+.....++.|+.++..+++++.. .+
T Consensus 43 ~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~-- 107 (236)
T PF01370_consen 43 NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAARE----AG-- 107 (236)
T ss_dssp TEEEEESETTSHHHHHHHHHHH-----TESEEEEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHHHH----HT--
T ss_pred eEEEEEeecccccccccccccc-----CceEEEEeeccccc----ccccccccccccccccccccccccccc----cc--
Confidence 5788999999999999998876 79999999996431 112245567778888888888877753 33
Q ss_pred CCCCCCCceEEEecccccccCC-----------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCC---
Q 027828 101 QASSSSGGIIINISATLHYTAT-----------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA--- 166 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~--- 166 (218)
..++|++||...+... .+...|+.+|...+.+++.+..+. ++++..++|+.+..+.
T Consensus 108 ------~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~----~~~~~~~R~~~vyG~~~~~ 177 (236)
T PF01370_consen 108 ------VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY----GLRVTILRPPNVYGPGNPN 177 (236)
T ss_dssp ------TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH----TSEEEEEEESEEESTTSSS
T ss_pred ------ccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccc
Confidence 3579999997544322 245569999999999999887654 6999999999999876
Q ss_pred ccCCCChHHHHHhhhhhcCC---------CCCCCHHHHHHHHHHhccCCC
Q 027828 167 GVSKLAPEEIRSKATDYMAA---------YKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~e~a~~~~~L~s~~~ 207 (218)
.........+........+. ..+...+|++++++.++....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~ 227 (236)
T PF01370_consen 178 NNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK 227 (236)
T ss_dssp SSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred cccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC
Confidence 12222223333333322211 113467999999999987544
No 250
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.80 E-value=9e-08 Score=75.84 Aligned_cols=153 Identities=15% Similarity=0.082 Sum_probs=105.0
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCC
Q 027828 24 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 103 (218)
Q Consensus 24 ~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 103 (218)
++.+|++|.+++.++++ +.|+|||.|+...... ....+.++++|+.|+-++++++.. .+
T Consensus 49 ~~~~Di~d~~~l~~a~~-------g~d~V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa~~----~~----- 107 (280)
T PF01073_consen 49 YIQGDITDPESLEEALE-------GVDVVFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAARK----AG----- 107 (280)
T ss_pred EEEeccccHHHHHHHhc-------CCceEEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHHHH----cC-----
Confidence 88999999999988877 6899999999654322 334578899999999999998864 23
Q ss_pred CCCCceEEEecccccccC---C--------------cchhHhHHhHHHHHHHHHHHHh-hhcCCCCeEEeeeecCcccCC
Q 027828 104 SSSGGIIINISATLHYTA---T--------------WYQIHVSAAKAAVDSITRSLAL-EWGTDYAIRVNGIAPGPIKDT 165 (218)
Q Consensus 104 ~~~~~~iv~iss~~~~~~---~--------------~~~~~y~~sK~a~~~~~~~la~-el~~~~gi~v~~v~pG~v~t~ 165 (218)
-.++|++||..+... . .....|+.+|+..+.++..... ++.....++..+|+|..|..|
T Consensus 108 ---VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp 184 (280)
T PF01073_consen 108 ---VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGP 184 (280)
T ss_pred ---CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCc
Confidence 478999999986543 0 1334799999999988877654 222123599999999999977
Q ss_pred CccCCCChHHHHHhhhhh---cCC------CCCCCHHHHHHHHHHh
Q 027828 166 AGVSKLAPEEIRSKATDY---MAA------YKFGEKWDIAMAALYL 202 (218)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~e~a~~~~~L 202 (218)
...... + ...+..... ... .-+...+++|++.+-.
T Consensus 185 ~d~~~~-~-~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA 228 (280)
T PF01073_consen 185 GDQRLV-P-RLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLA 228 (280)
T ss_pred cccccc-c-hhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHH
Confidence 533221 1 111111111 111 1144678999987653
No 251
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.79 E-value=1.5e-07 Score=76.38 Aligned_cols=122 Identities=14% Similarity=0.027 Sum_probs=87.6
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|++|.+.+..+++. .++|+|||+||...... ..+.....+++|+.++..+++++. +.+
T Consensus 50 ~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~- 115 (338)
T PRK10675 50 KHPTFVEGDIRNEALLTEILHD-----HAIDTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAMR----AAN- 115 (338)
T ss_pred CCceEEEccCCCHHHHHHHHhc-----CCCCEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHHH----HcC-
Confidence 3567789999999988887653 37999999999654221 122345678899999999887653 333
Q ss_pred CCCCCCCCceEEEecccccccCC------------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCC
Q 027828 100 GQASSSSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~ 165 (218)
.++||++||...+... .+...|+.+|.+.+.+++.++.+.. ++++..++++.+..+
T Consensus 116 -------~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~---~~~~~ilR~~~v~g~ 183 (338)
T PRK10675 116 -------VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP---DWSIALLRYFNPVGA 183 (338)
T ss_pred -------CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeecCC
Confidence 4689999997543211 2357899999999999999876532 577777777666543
No 252
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.72 E-value=1.3e-06 Score=69.85 Aligned_cols=172 Identities=15% Similarity=0.066 Sum_probs=109.0
Q ss_pred HHHHHHHhcCCCee----EEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHH
Q 027828 10 SAVAALHSLGIPAI----GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85 (218)
Q Consensus 10 ~~~~~l~~~~~~~~----~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 85 (218)
.+++.|.+.|..+. ...+|+++.+++..+++.. ++|+|||+|+........ .+.....+++|+.++..
T Consensus 12 ~l~~~L~~~g~~v~~~~~~~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~~~~~~~~~---~~~~~~~~~~n~~~~~~ 83 (306)
T PLN02725 12 AIVRKLEALGFTNLVLRTHKELDLTRQADVEAFFAKE-----KPTYVILAAAKVGGIHAN---MTYPADFIRENLQIQTN 83 (306)
T ss_pred HHHHHHHhCCCcEEEeeccccCCCCCHHHHHHHHhcc-----CCCEEEEeeeeecccchh---hhCcHHHHHHHhHHHHH
Confidence 45566666654432 3468999999888876652 689999999964311101 11223467789999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC----------------cchhHhHHhHHHHHHHHHHHHhhhcCC
Q 027828 86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT----------------WYQIHVSAAKAAVDSITRSLALEWGTD 149 (218)
Q Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~----------------~~~~~y~~sK~a~~~~~~~la~el~~~ 149 (218)
+++++.. .+ -.++|++||...+.+. |....|+.+|.+.+.+++.+..+
T Consensus 84 ll~~~~~----~~--------~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---- 147 (306)
T PLN02725 84 VIDAAYR----HG--------VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQ---- 147 (306)
T ss_pred HHHHHHH----cC--------CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHH----
Confidence 8888763 22 3579999997543211 11235999999999888877544
Q ss_pred CCeEEeeeecCcccCCCccCCC----ChHHHHHhh----hhh----------cCCCCCCCHHHHHHHHHHhccC
Q 027828 150 YAIRVNGIAPGPIKDTAGVSKL----APEEIRSKA----TDY----------MAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 150 ~gi~v~~v~pG~v~t~~~~~~~----~~~~~~~~~----~~~----------~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+++++..++|+.+..+...... .-+.+...+ ... .+...+...+|++++++.++..
T Consensus 148 ~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~ 221 (306)
T PLN02725 148 YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRR 221 (306)
T ss_pred hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhc
Confidence 3689999999999877532110 011111111 111 1122456789999999998864
No 253
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.72 E-value=1.5e-06 Score=69.66 Aligned_cols=156 Identities=12% Similarity=0.063 Sum_probs=97.1
Q ss_pred ecCCCHHHHHHHHHHHHH--HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCC
Q 027828 27 GDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 104 (218)
Q Consensus 27 ~D~s~~~~~~~~~~~~~~--~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 104 (218)
+|+.|..+.+.+++.+.+ .++++|+|||.|+...... ... +..++.|+.++.++++++.. .
T Consensus 45 ~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~~~---~~~---~~~~~~n~~~t~~ll~~~~~----~------- 107 (308)
T PRK11150 45 LDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSSTTE---WDG---KYMMDNNYQYSKELLHYCLE----R------- 107 (308)
T ss_pred hhhhhhhhHHHHHHHHhcccccCCccEEEECceecCCcC---CCh---HHHHHHHHHHHHHHHHHHHH----c-------
Confidence 455555555555444432 2357999999998644221 122 34689999999999988753 2
Q ss_pred CCCceEEEecccccccC-----------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCC-C
Q 027828 105 SSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL-A 172 (218)
Q Consensus 105 ~~~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~-~ 172 (218)
..++|++||...+.. ..+...|+.+|.+.+.+++.+..+ +++.+..++|+.+..+...... .
T Consensus 108 --~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~~lR~~~vyG~~~~~~~~~ 181 (308)
T PRK11150 108 --EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE----ANSQICGFRYFNVYGPREGHKGSM 181 (308)
T ss_pred --CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH----cCCCEEEEeeeeecCCCCCCCCcc
Confidence 246999999754331 123457999999999888877543 3689999999999876432211 1
Q ss_pred h---HHHHHhhh-hhcC---------CCCCCCHHHHHHHHHHhccC
Q 027828 173 P---EEIRSKAT-DYMA---------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 173 ~---~~~~~~~~-~~~~---------~~~~~~~~e~a~~~~~L~s~ 205 (218)
. ..+..... ...+ .+-+...+|++++++.++..
T Consensus 182 ~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~ 227 (308)
T PRK11150 182 ASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN 227 (308)
T ss_pred chhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence 1 11111121 1111 11245789999998888754
No 254
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.71 E-value=2.1e-06 Score=68.07 Aligned_cols=167 Identities=16% Similarity=0.081 Sum_probs=109.0
Q ss_pred HHHHHHHHHhcCCCeeEE---EecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHH
Q 027828 8 LRSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~---~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 84 (218)
...+++++.+.|.++..+ .+|+.+.+++.++++.. ++|+|||++|...... ........+++|+.++.
T Consensus 12 G~~l~~~l~~~g~~v~~~~r~~~d~~~~~~~~~~~~~~-----~~d~vi~~a~~~~~~~----~~~~~~~~~~~n~~~~~ 82 (287)
T TIGR01214 12 GRELVQQLSPEGRVVVALTSSQLDLTDPEALERLLRAI-----RPDAVVNTAAYTDVDG----AESDPEKAFAVNALAPQ 82 (287)
T ss_pred HHHHHHHHHhcCCEEEEeCCcccCCCCHHHHHHHHHhC-----CCCEEEECCccccccc----cccCHHHHHHHHHHHHH
Confidence 456777787777666543 47999999988887652 6899999999653211 11234567889999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC-----------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeE
Q 027828 85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIR 153 (218)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~ 153 (218)
.+.+++.. . +.++|++||...+.+ ..+...|+.+|.+.+.+++.+ +.+
T Consensus 83 ~l~~~~~~----~---------~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~--------~~~ 141 (287)
T TIGR01214 83 NLARAAAR----H---------GARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA--------GPN 141 (287)
T ss_pred HHHHHHHH----c---------CCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh--------CCC
Confidence 99988643 2 247999999653321 113467999999988887754 357
Q ss_pred EeeeecCcccCCCccCCCChHHHHHhhhhhcC-------CCCCCCHHHHHHHHHHhccC
Q 027828 154 VNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 154 v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~e~a~~~~~L~s~ 205 (218)
+..++|+.+..+...... ...+........+ ..-+...+|+++++..++..
T Consensus 142 ~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 199 (287)
T TIGR01214 142 ALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQR 199 (287)
T ss_pred eEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhh
Confidence 889999999876421111 1122222221111 11234578999999988854
No 255
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.71 E-value=6.6e-07 Score=71.83 Aligned_cols=157 Identities=14% Similarity=0.053 Sum_probs=99.2
Q ss_pred EEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCC
Q 027828 25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 104 (218)
Q Consensus 25 ~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 104 (218)
+..|+.+.+.++.+.+. .+.++|+|||+|+.... ..++.+..+++|+.++..+++++.. .
T Consensus 46 ~~~d~~~~~~~~~~~~~---~~~~~D~vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~~----~------- 105 (314)
T TIGR02197 46 IADYIDKEDFLDRLEKG---AFGKIEAIFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCAE----K------- 105 (314)
T ss_pred eeccCcchhHHHHHHhh---ccCCCCEEEECccccCc------cccchHHHHHHHHHHHHHHHHHHHH----h-------
Confidence 45667766655554432 34689999999996431 1234567889999999999988753 2
Q ss_pred CCCceEEEecccccccC-----------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCC-
Q 027828 105 SSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA- 172 (218)
Q Consensus 105 ~~~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~- 172 (218)
..++|++||...+.. ..+...|+.+|.+.+.+++....+. ..++++..++|+.+..+.......
T Consensus 106 --~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~lR~~~vyG~~~~~~~~~ 181 (314)
T TIGR02197 106 --GIPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPE--ALSAQVVGLRYFNVYGPREYHKGKM 181 (314)
T ss_pred --CCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhh--ccCCceEEEEEeeccCCCCCCCCCc
Confidence 246999999764321 1245679999999999988643321 235788999999888764321110
Q ss_pred ---hHHHHHhhhhh--cC-------------CCCCCCHHHHHHHHHHhccC
Q 027828 173 ---PEEIRSKATDY--MA-------------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 173 ---~~~~~~~~~~~--~~-------------~~~~~~~~e~a~~~~~L~s~ 205 (218)
-..+....... +. ..-+...+|+++++..++..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~ 232 (314)
T TIGR02197 182 ASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN 232 (314)
T ss_pred ccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc
Confidence 11122211111 10 01245679999999998864
No 256
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.69 E-value=2.7e-06 Score=66.61 Aligned_cols=170 Identities=18% Similarity=0.098 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHhcCCCeeEE---EecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 5 KTVLRSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~---~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
-.-...+.+.+. .+.++... .+|++|++.+.+++.+. ++|+|||+|++.....-+ .+-+..+.+|..
T Consensus 10 GqLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~~-----~PDvVIn~AAyt~vD~aE----~~~e~A~~vNa~ 79 (281)
T COG1091 10 GQLGTELRRALP-GEFEVIATDRAELDITDPDAVLEVIRET-----RPDVVINAAAYTAVDKAE----SEPELAFAVNAT 79 (281)
T ss_pred ChHHHHHHHHhC-CCceEEeccCccccccChHHHHHHHHhh-----CCCEEEECcccccccccc----CCHHHHHHhHHH
Confidence 333444455444 22344332 48999999999999886 899999999986644322 234678999999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC-----------CcchhHhHHhHHHHHHHHHHHHhhhcCCC
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDY 150 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~~~~~la~el~~~~ 150 (218)
++.++.+++... +..+|++|+-.-+-+ ..+...||.+|.+.+..++...
T Consensus 80 ~~~~lA~aa~~~-------------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~------- 139 (281)
T COG1091 80 GAENLARAAAEV-------------GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG------- 139 (281)
T ss_pred HHHHHHHHHHHh-------------CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC-------
Confidence 999999998642 578999997653211 2366789999999998888652
Q ss_pred CeEEeeeecCcccCCCccCCCChHHHHHhhhhhc-------CCCCCCCHHHHHHHHHHhccCCC
Q 027828 151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM-------AAYKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 151 gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~e~a~~~~~L~s~~~ 207 (218)
-+...++..++..... ..+...+.+....+- ..+.+...+++|.++..|+....
T Consensus 140 -~~~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~ 200 (281)
T COG1091 140 -PRHLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK 200 (281)
T ss_pred -CCEEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc
Confidence 2334444445543322 111222233232221 12445677999999999876543
No 257
>PLN02427 UDP-apiose/xylose synthase
Probab=98.67 E-value=2.6e-07 Score=76.54 Aligned_cols=157 Identities=11% Similarity=0.006 Sum_probs=101.3
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|+.|.+.+.+++. .+|+|||.|+..........+ ...+..|+.++.++++++.. .
T Consensus 66 ~~~~~~~Dl~d~~~l~~~~~-------~~d~ViHlAa~~~~~~~~~~~----~~~~~~n~~gt~~ll~aa~~----~--- 127 (386)
T PLN02427 66 RIQFHRINIKHDSRLEGLIK-------MADLTINLAAICTPADYNTRP----LDTIYSNFIDALPVVKYCSE----N--- 127 (386)
T ss_pred CeEEEEcCCCChHHHHHHhh-------cCCEEEEcccccChhhhhhCh----HHHHHHHHHHHHHHHHHHHh----c---
Confidence 57889999999988777664 479999999965432222111 23456799999988887642 2
Q ss_pred CCCCCCCceEEEecccccccCC---------c------------------------chhHhHHhHHHHHHHHHHHHhhhc
Q 027828 101 QASSSSGGIIINISATLHYTAT---------W------------------------YQIHVSAAKAAVDSITRSLALEWG 147 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~---------~------------------------~~~~y~~sK~a~~~~~~~la~el~ 147 (218)
..++|++||...+... | ....|+.+|.+.+.+++.++.
T Consensus 128 ------~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~--- 198 (386)
T PLN02427 128 ------NKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGA--- 198 (386)
T ss_pred ------CCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHh---
Confidence 2469999997543210 0 123699999999988876643
Q ss_pred CCCCeEEeeeecCcccCCCccCCC-------C-h---HHHHHhhhhhcC---------CCCCCCHHHHHHHHHHhccC
Q 027828 148 TDYAIRVNGIAPGPIKDTAGVSKL-------A-P---EEIRSKATDYMA---------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 148 ~~~gi~v~~v~pG~v~t~~~~~~~-------~-~---~~~~~~~~~~~~---------~~~~~~~~e~a~~~~~L~s~ 205 (218)
.+|+.+..++|+.+..+...... . + ..+........+ ..-+...+|+|++++.++..
T Consensus 199 -~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~ 275 (386)
T PLN02427 199 -ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIEN 275 (386)
T ss_pred -hcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhC
Confidence 44799999999999977532100 0 0 011111111111 11256789999999988854
No 258
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.63 E-value=3.2e-07 Score=77.61 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=77.6
Q ss_pred hhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeec
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~p 159 (218)
+.+.+.+.+.+++.|.+ .|+||+++|..+.. ....|+++|+++.+++|+++.|+ ++|++++.|.|
T Consensus 99 l~~~~~~~~~~l~~l~~----------~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~--~~gi~v~~i~~ 163 (450)
T PRK08261 99 LKALYEFFHPVLRSLAP----------CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL--RRGATAQLVYV 163 (450)
T ss_pred HHHHHHHHHHHHHhccC----------CCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh--hcCCEEEEEec
Confidence 33556677777777754 58999999987643 34569999999999999999998 45999999988
Q ss_pred CcccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCCccccccccccC
Q 027828 160 GPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+. ..++++++++.||+++.+.+++|+.+..|
T Consensus 164 ~~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~ 194 (450)
T PRK08261 164 AP----------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVG 194 (450)
T ss_pred CC----------------------------CCHHHHHHHHHHhcCCccCCccCcEEEec
Confidence 74 26778999999999999999999887653
No 259
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.62 E-value=1.2e-06 Score=77.62 Aligned_cols=162 Identities=14% Similarity=0.037 Sum_probs=106.0
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|++|.+.+..++.. .++|+|||+|+...... ...+....+++|+.++..+++++.. .+.
T Consensus 57 ~~v~~~~~Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~ 123 (668)
T PLN02260 57 PNFKFVKGDIASADLVNYLLIT-----EGIDTIMHFAAQTHVDN----SFGNSFEFTKNNIYGTHVLLEACKV----TGQ 123 (668)
T ss_pred CCeEEEECCCCChHHHHHHHhh-----cCCCEEEECCCccCchh----hhhCHHHHHHHHHHHHHHHHHHHHh----cCC
Confidence 3578889999998877665432 37999999999654221 1122345678999999999888743 210
Q ss_pred CCCCCCCCceEEEecccccccC--------------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCC
Q 027828 100 GQASSSSGGIIINISATLHYTA--------------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~--------------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~ 165 (218)
..++|++||...+.. ..+...|+.+|.+.+.+++.+..+ +++.+..++|+.+..+
T Consensus 124 -------vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~----~~l~~vilR~~~VyGp 192 (668)
T PLN02260 124 -------IRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRS----YGLPVITTRGNNVYGP 192 (668)
T ss_pred -------CcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHH----cCCCEEEECcccccCc
Confidence 357999999754321 113457999999999999887654 3689999999999876
Q ss_pred CccCCCChHHHHHhhhhhc--CC-------CCCCCHHHHHHHHHHhccC
Q 027828 166 AGVSKLAPEEIRSKATDYM--AA-------YKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~e~a~~~~~L~s~ 205 (218)
.......-+.+........ +. .-+...+|+|+++..++..
T Consensus 193 ~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~ 241 (668)
T PLN02260 193 NQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHK 241 (668)
T ss_pred CCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhc
Confidence 5322111122222222111 11 1235689999999988753
No 260
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.53 E-value=7e-06 Score=67.04 Aligned_cols=157 Identities=15% Similarity=0.053 Sum_probs=101.0
Q ss_pred CeeEEEecCC-CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 21 PAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 21 ~~~~~~~D~s-~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.+.++.+|+. +.+.+..+++ ++|+|||.|+...+.... ++-+..+++|+.++.++.+++.. .
T Consensus 47 ~~~~~~~Dl~~~~~~~~~~~~-------~~d~ViH~aa~~~~~~~~----~~p~~~~~~n~~~~~~ll~aa~~----~-- 109 (347)
T PRK11908 47 RMHFFEGDITINKEWIEYHVK-------KCDVILPLVAIATPATYV----KQPLRVFELDFEANLPIVRSAVK----Y-- 109 (347)
T ss_pred CeEEEeCCCCCCHHHHHHHHc-------CCCEEEECcccCChHHhh----cCcHHHHHHHHHHHHHHHHHHHh----c--
Confidence 5788899998 5665544433 689999999965432211 12346678999999988887753 2
Q ss_pred CCCCCCCCceEEEecccccccCC------------------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 100 GQASSSSGGIIINISATLHYTAT------------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~------------------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
..++|++||...+... ++...|+.+|.+.+.+++.++.+ +|+.+..++|+.
T Consensus 110 -------~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~----~~~~~~ilR~~~ 178 (347)
T PRK11908 110 -------GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME----EGLNFTLFRPFN 178 (347)
T ss_pred -------CCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH----cCCCeEEEeeee
Confidence 2469999997543210 11236999999999988887653 368889999998
Q ss_pred ccCCCccCCC--------ChHHHHHhhhhhc---------CCCCCCCHHHHHHHHHHhccC
Q 027828 162 IKDTAGVSKL--------APEEIRSKATDYM---------AAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 162 v~t~~~~~~~--------~~~~~~~~~~~~~---------~~~~~~~~~e~a~~~~~L~s~ 205 (218)
+..+...... .-..+...+.... ..+-+...+|++++++.++..
T Consensus 179 v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~ 239 (347)
T PRK11908 179 WIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIEN 239 (347)
T ss_pred eeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhC
Confidence 8876432110 0112222211111 112357789999999988864
No 261
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.51 E-value=8e-06 Score=67.39 Aligned_cols=158 Identities=18% Similarity=0.065 Sum_probs=101.6
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCC
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ 101 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 101 (218)
..++.+|+.+.+.+..++. ++|+|||.|+......+... .....+..|+.++.++++++.. .+
T Consensus 66 ~~~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~~~~~~~~---~~~~~~~~N~~~t~nll~aa~~----~~--- 128 (370)
T PLN02695 66 HEFHLVDLRVMENCLKVTK-------GVDHVFNLAADMGGMGFIQS---NHSVIMYNNTMISFNMLEAARI----NG--- 128 (370)
T ss_pred ceEEECCCCCHHHHHHHHh-------CCCEEEEcccccCCcccccc---CchhhHHHHHHHHHHHHHHHHH----hC---
Confidence 3556789988877655543 58999999985432222111 1234567899999999887642 22
Q ss_pred CCCCCCceEEEeccccccc-----------------CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccC
Q 027828 102 ASSSSGGIIINISATLHYT-----------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164 (218)
Q Consensus 102 ~~~~~~~~iv~iss~~~~~-----------------~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t 164 (218)
-.++|++||...+. +..+...|+.+|.+.+.+++.++.. +|+++..++|+.+..
T Consensus 129 -----vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~----~g~~~~ilR~~~vyG 199 (370)
T PLN02695 129 -----VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKD----FGIECRIGRFHNIYG 199 (370)
T ss_pred -----CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCEEEEEECCccC
Confidence 35799999974321 1234568999999999999887553 369999999999998
Q ss_pred CCccCCC----ChHHHHHhhhh---hcC-------CCCCCCHHHHHHHHHHhccC
Q 027828 165 TAGVSKL----APEEIRSKATD---YMA-------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 165 ~~~~~~~----~~~~~~~~~~~---~~~-------~~~~~~~~e~a~~~~~L~s~ 205 (218)
|...... ....+...... .++ ..-+...+|++++++.++..
T Consensus 200 p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~ 254 (370)
T PLN02695 200 PFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKS 254 (370)
T ss_pred CCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence 7432211 12233222211 111 11245779999999988754
No 262
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.49 E-value=9.7e-06 Score=64.93 Aligned_cols=159 Identities=14% Similarity=0.052 Sum_probs=102.2
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCCc-cEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGKL-DILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~l-d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
+.++.+|+++.+.+..+.+ .. |.+||.|+......... . .....+.+|+.++.++++++.. .+
T Consensus 44 ~~~~~~d~~~~~~~~~~~~-------~~~d~vih~aa~~~~~~~~~--~-~~~~~~~~nv~gt~~ll~aa~~----~~-- 107 (314)
T COG0451 44 VEFVVLDLTDRDLVDELAK-------GVPDAVIHLAAQSSVPDSNA--S-DPAEFLDVNVDGTLNLLEAARA----AG-- 107 (314)
T ss_pred cceeeecccchHHHHHHHh-------cCCCEEEEccccCchhhhhh--h-CHHHHHHHHHHHHHHHHHHHHH----cC--
Confidence 3556788888844444433 33 99999999654322111 1 3456888999999999999875 23
Q ss_pred CCCCCCCceEEEecccccccCC-----------cch--hHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCc
Q 027828 101 QASSSSGGIIINISATLHYTAT-----------WYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~-----------~~~--~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~ 167 (218)
..++|+.||.....+. +.. ..|+.+|.+.+.+++....+ +|+.+..++|+.+..+..
T Consensus 108 ------~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~----~~~~~~ilR~~~vyGp~~ 177 (314)
T COG0451 108 ------VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL----YGLPVVILRPFNVYGPGD 177 (314)
T ss_pred ------CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCeEEEeeeeeeCCCC
Confidence 4679996665533321 111 14999999999999988772 369999999999987764
Q ss_pred cCC---CChHHHHHhhhhhcC---CC-------CCCCHHHHHHHHHHhccCC
Q 027828 168 VSK---LAPEEIRSKATDYMA---AY-------KFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 168 ~~~---~~~~~~~~~~~~~~~---~~-------~~~~~~e~a~~~~~L~s~~ 206 (218)
... .....+........+ .. -+...+|+++++..++...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~ 229 (314)
T COG0451 178 KPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENP 229 (314)
T ss_pred CCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCC
Confidence 443 122222221222222 11 1355799999999998754
No 263
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.44 E-value=2.6e-06 Score=66.39 Aligned_cols=120 Identities=16% Similarity=0.125 Sum_probs=70.0
Q ss_pred CCCeeEEEecCCCHHH--HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh
Q 027828 19 GIPAIGLEGDVRKRED--AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKK 96 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~--~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 96 (218)
..+++++.+|++++.- -.+..+++.+ .+|+|||+|+...... .++...++|+.|+..+++.+..
T Consensus 59 ~~ri~~v~GDl~~~~lGL~~~~~~~L~~---~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la~~---- 124 (249)
T PF07993_consen 59 LSRIEVVEGDLSQPNLGLSDEDYQELAE---EVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLAAQ---- 124 (249)
T ss_dssp TTTEEEEE--TTSGGGG--HHHHHHHHH---H--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHHTS----
T ss_pred hccEEEEeccccccccCCChHHhhcccc---ccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHHHh----
Confidence 4689999999998541 0112222222 5899999999654221 3455788999999999988862
Q ss_pred cCCCCCCCCCCceEEEeccccccc--------------------CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEee
Q 027828 97 GGRGQASSSSGGIIINISATLHYT--------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNG 156 (218)
Q Consensus 97 ~~~~~~~~~~~~~iv~iss~~~~~--------------------~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~ 156 (218)
.+ ..++++|||..... .......|..||+..+.+++..+.+. |+.+..
T Consensus 125 ~~--------~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~----g~p~~I 192 (249)
T PF07993_consen 125 GK--------RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH----GLPVTI 192 (249)
T ss_dssp SS-----------EEEEEEGGGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-------EEE
T ss_pred cc--------CcceEEeccccccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC----CceEEE
Confidence 22 34799999932110 11233579999999999999887653 589999
Q ss_pred eecCcccC
Q 027828 157 IAPGPIKD 164 (218)
Q Consensus 157 v~pG~v~t 164 (218)
++||.+..
T Consensus 193 ~Rp~~i~g 200 (249)
T PF07993_consen 193 YRPGIIVG 200 (249)
T ss_dssp EEE-EEE-
T ss_pred EecCcccc
Confidence 99999975
No 264
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.43 E-value=4.6e-06 Score=69.29 Aligned_cols=146 Identities=18% Similarity=0.042 Sum_probs=93.8
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++.++.+|++|++++..+++.. .+++|+|||+++..... . ...+++|+.++.++++++. +.+
T Consensus 111 ~~v~~v~~Dl~d~~~l~~~~~~~---~~~~D~Vi~~aa~~~~~-----~----~~~~~vn~~~~~~ll~aa~----~~g- 173 (390)
T PLN02657 111 PGAEVVFGDVTDADSLRKVLFSE---GDPVDVVVSCLASRTGG-----V----KDSWKIDYQATKNSLDAGR----EVG- 173 (390)
T ss_pred CCceEEEeeCCCHHHHHHHHHHh---CCCCcEEEECCccCCCC-----C----ccchhhHHHHHHHHHHHHH----HcC-
Confidence 35788999999999998887643 12799999998843211 1 1234567777777777653 444
Q ss_pred CCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHh
Q 027828 100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~ 179 (218)
-++||++||..... +...|..+|..++...+. . ..|++...++|+.+..+.. ...+.
T Consensus 174 -------v~r~V~iSS~~v~~---p~~~~~~sK~~~E~~l~~-----~-~~gl~~tIlRp~~~~~~~~-------~~~~~ 230 (390)
T PLN02657 174 -------AKHFVLLSAICVQK---PLLEFQRAKLKFEAELQA-----L-DSDFTYSIVRPTAFFKSLG-------GQVEI 230 (390)
T ss_pred -------CCEEEEEeeccccC---cchHHHHHHHHHHHHHHh-----c-cCCCCEEEEccHHHhcccH-------HHHHh
Confidence 47899999986543 344677888888776553 2 4589999999988763211 01111
Q ss_pred hhhhcC----------CCCCCCHHHHHHHHHHhccC
Q 027828 180 ATDYMA----------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 180 ~~~~~~----------~~~~~~~~e~a~~~~~L~s~ 205 (218)
.....+ ...+...+|+|.+++.++.+
T Consensus 231 ~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~ 266 (390)
T PLN02657 231 VKDGGPYVMFGDGKLCACKPISEADLASFIADCVLD 266 (390)
T ss_pred hccCCceEEecCCcccccCceeHHHHHHHHHHHHhC
Confidence 111100 01135678999988887743
No 265
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.42 E-value=4.2e-06 Score=66.58 Aligned_cols=168 Identities=14% Similarity=0.051 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHhcCCCeeEE---EecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 6 TVLRSAVAALHSLGIPAIGL---EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~---~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
--...+.+.+.+.|.++... .+|++|.+.+.+++... ++|+|||+|+...+.. -.+.-+..+.+|+.+
T Consensus 11 ~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~-----~pd~Vin~aa~~~~~~----ce~~p~~a~~iN~~~ 81 (286)
T PF04321_consen 11 FLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAF-----KPDVVINCAAYTNVDA----CEKNPEEAYAINVDA 81 (286)
T ss_dssp HHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH-------SEEEE------HHH----HHHSHHHHHHHHTHH
T ss_pred HHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHh-----CCCeEeccceeecHHh----hhhChhhhHHHhhHH
Confidence 34456677777655455555 78999999999998876 6999999999743211 112345688899999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC-----------CcchhHhHHhHHHHHHHHHHHHhhhcCCCC
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-----------TWYQIHVSAAKAAVDSITRSLALEWGTDYA 151 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~~~~~la~el~~~~g 151 (218)
+..+.+++.. . +.++|++||..-+.+ ..+...||-+|...+..++.. . +
T Consensus 82 ~~~la~~~~~----~---------~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~----~-~-- 141 (286)
T PF04321_consen 82 TKNLAEACKE----R---------GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAA----C-P-- 141 (286)
T ss_dssp HHHHHHHHHH----C---------T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH------S--
T ss_pred HHHHHHHHHH----c---------CCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHh----c-C--
Confidence 9999988863 2 578999999753322 124568999999998888763 1 2
Q ss_pred eEEeeeecCcccCCCccCCCChHHHHHhhhhhcC-------CCCCCCHHHHHHHHHHhccC
Q 027828 152 IRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYMA-------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 152 i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~e~a~~~~~L~s~ 205 (218)
....++++++..+ .....-.++...+....+ ...+...+|+|+.+..|+..
T Consensus 142 -~~~IlR~~~~~g~--~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~ 199 (286)
T PF04321_consen 142 -NALILRTSWVYGP--SGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEK 199 (286)
T ss_dssp -SEEEEEE-SEESS--SSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHH
T ss_pred -CEEEEecceeccc--CCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHh
Confidence 5667888888755 111122333333332211 12234668999999999854
No 266
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.41 E-value=1.1e-05 Score=71.50 Aligned_cols=157 Identities=15% Similarity=0.058 Sum_probs=101.2
Q ss_pred CeeEEEecCCCHHH-HHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 21 PAIGLEGDVRKRED-AVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 21 ~~~~~~~D~s~~~~-~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
++.++.+|++|.++ +++++ .++|+|||.|+...+.... +..+..+++|+.++.++.+++...
T Consensus 361 ~~~~~~gDl~d~~~~l~~~l-------~~~D~ViHlAa~~~~~~~~----~~~~~~~~~Nv~~t~~ll~a~~~~------ 423 (660)
T PRK08125 361 RFHFVEGDISIHSEWIEYHI-------KKCDVVLPLVAIATPIEYT----RNPLRVFELDFEENLKIIRYCVKY------ 423 (660)
T ss_pred ceEEEeccccCcHHHHHHHh-------cCCCEEEECccccCchhhc----cCHHHHHHhhHHHHHHHHHHHHhc------
Confidence 47788899998665 33333 2689999999965432221 123456789999999999887632
Q ss_pred CCCCCCCCceEEEecccccccCC---------------c---chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 100 GQASSSSGGIIINISATLHYTAT---------------W---YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~---------------~---~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
..++|++||...+... + +...|+.+|.+.+.+++.++.+ +|+++..++|+.
T Consensus 424 -------~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~----~g~~~~ilR~~~ 492 (660)
T PRK08125 424 -------NKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK----EGLRFTLFRPFN 492 (660)
T ss_pred -------CCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh----cCCceEEEEEce
Confidence 2469999996533210 1 1236999999999999887554 369999999999
Q ss_pred ccCCCccCC----CC----hHHHHHhhhhhcC---------CCCCCCHHHHHHHHHHhccC
Q 027828 162 IKDTAGVSK----LA----PEEIRSKATDYMA---------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 162 v~t~~~~~~----~~----~~~~~~~~~~~~~---------~~~~~~~~e~a~~~~~L~s~ 205 (218)
+..|..... .. -..+.......-+ .+-+...+|++++++.++..
T Consensus 493 vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~ 553 (660)
T PRK08125 493 WMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN 553 (660)
T ss_pred eeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc
Confidence 987643210 00 1122121111111 12256789999999888754
No 267
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.39 E-value=5.3e-06 Score=61.34 Aligned_cols=136 Identities=14% Similarity=0.079 Sum_probs=88.4
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
..++.++.+|+.|++++.+.+. +.|++|+++|.... + ...++.++..+++.+
T Consensus 38 ~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~~~~~~---------~------------~~~~~~~~~a~~~~~ 89 (183)
T PF13460_consen 38 SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAAGPPPK---------D------------VDAAKNIIEAAKKAG 89 (183)
T ss_dssp CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECCHSTTT---------H------------HHHHHHHHHHHHHTT
T ss_pred ccccccceeeehhhhhhhhhhh-------hcchhhhhhhhhcc---------c------------ccccccccccccccc
Confidence 3578999999999987777665 78999999975332 1 445566666666665
Q ss_pred CCCCCCCCCceEEEecccccccCCcc---------hhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccC
Q 027828 99 RGQASSSSGGIIINISATLHYTATWY---------QIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 169 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~~~~---------~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~ 169 (218)
-.++|++|+.......+. ...|...|...+.+. . ..++....++|+++..+....
T Consensus 90 --------~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~-~~~~~~~ivrp~~~~~~~~~~ 153 (183)
T PF13460_consen 90 --------VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEAL-------R-ESGLNWTIVRPGWIYGNPSRS 153 (183)
T ss_dssp --------SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHH-------H-HSTSEEEEEEESEEEBTTSSS
T ss_pred --------cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHH-------H-hcCCCEEEEECcEeEeCCCcc
Confidence 578999999886654332 234555555444333 2 347999999999998764221
Q ss_pred CCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhcc
Q 027828 170 KLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS 204 (218)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s 204 (218)
. .+... .........+.+|+|++++.++.
T Consensus 154 ~----~~~~~--~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 154 Y----RLIKE--GGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp E----EEESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred e----eEEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence 1 00000 11111135678999999998763
No 268
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=98.37 E-value=3.6e-06 Score=65.15 Aligned_cols=162 Identities=12% Similarity=0.033 Sum_probs=112.3
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.+..++..|+.+...+.-++.. .++|.|+|-|.......... +--..++.|++++..|+.+......
T Consensus 57 p~ykfv~~di~~~~~~~~~~~~-----~~id~vihfaa~t~vd~s~~----~~~~~~~nnil~t~~Lle~~~~sg~---- 123 (331)
T KOG0747|consen 57 PNYKFVEGDIADADLVLYLFET-----EEIDTVIHFAAQTHVDRSFG----DSFEFTKNNILSTHVLLEAVRVSGN---- 123 (331)
T ss_pred CCceEeeccccchHHHHhhhcc-----CchhhhhhhHhhhhhhhhcC----chHHHhcCCchhhhhHHHHHHhccC----
Confidence 4788999999999888777664 48999999998654322111 1234677899999999988865432
Q ss_pred CCCCCCCCceEEEeccccccc------------CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCc
Q 027828 100 GQASSSSGGIIINISATLHYT------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~------------~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~ 167 (218)
..++|.||+..-+. ...+...|+++|+|.+++.+++...+ |+.+..++.+.|..|..
T Consensus 124 -------i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy----~lpvv~~R~nnVYGP~q 192 (331)
T KOG0747|consen 124 -------IRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY----GLPVVTTRMNNVYGPNQ 192 (331)
T ss_pred -------eeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc----CCcEEEEeccCccCCCc
Confidence 46799999976432 12355679999999999999997654 69999999999998764
Q ss_pred cCCCChHHHHHhhhhh--cC-------CCCCCCHHHHHHHHHHhccC
Q 027828 168 VSKLAPEEIRSKATDY--MA-------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 168 ~~~~~~~~~~~~~~~~--~~-------~~~~~~~~e~a~~~~~L~s~ 205 (218)
...-.-+.+....... .+ .+.+...+|+++++-..+..
T Consensus 193 ~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K 239 (331)
T KOG0747|consen 193 YPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK 239 (331)
T ss_pred ChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc
Confidence 4432222222211111 11 12245679999998887754
No 269
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.35 E-value=5.8e-06 Score=64.65 Aligned_cols=112 Identities=22% Similarity=0.111 Sum_probs=82.5
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCC
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ 101 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 101 (218)
+.++.+|+.|.+.+.+++++- ++|.|||-||..... -+.+.-.+.++.|+.+++.|++++.. .+
T Consensus 46 ~~f~~gDi~D~~~L~~vf~~~-----~idaViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am~~----~g--- 109 (329)
T COG1087 46 FKFYEGDLLDRALLTAVFEEN-----KIDAVVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAMLQ----TG--- 109 (329)
T ss_pred CceEEeccccHHHHHHHHHhc-----CCCEEEECccccccc----hhhhCHHHHHhhchHhHHHHHHHHHH----hC---
Confidence 578899999999999998874 899999999965433 23444567889999999999988654 43
Q ss_pred CCCCCCceEEEeccccccc-----------CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeee
Q 027828 102 ASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIA 158 (218)
Q Consensus 102 ~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~ 158 (218)
-.+|||-||.+-+. +..+...|+.+|.+.+.+.+.++.-. +.++..++
T Consensus 110 -----v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~----~~~~v~LR 168 (329)
T COG1087 110 -----VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN----PFKVVILR 168 (329)
T ss_pred -----CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC----CCcEEEEE
Confidence 34577766655332 22355689999999999999987743 35555544
No 270
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.28 E-value=2.7e-05 Score=62.31 Aligned_cols=126 Identities=19% Similarity=0.132 Sum_probs=84.1
Q ss_pred HHHHHHHHhcCCCeeEE-------EecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 9 RSAVAALHSLGIPAIGL-------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~-------~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
..+.+.|.+.| ++..+ .+|++|.+.+.++++.. ++|+|||+|+....... .++-+..+.+|+.
T Consensus 14 s~l~~~L~~~g-~V~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~Aa~~~~~~~----~~~~~~~~~~N~~ 83 (299)
T PRK09987 14 WELQRALAPLG-NLIALDVHSTDYCGDFSNPEGVAETVRKI-----RPDVIVNAAAHTAVDKA----ESEPEFAQLLNAT 83 (299)
T ss_pred HHHHHHhhccC-CEEEeccccccccCCCCCHHHHHHHHHhc-----CCCEEEECCccCCcchh----hcCHHHHHHHHHH
Confidence 34556666655 44332 36999999888877742 68999999996543211 1123456679999
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------CCcchhHhHHhHHHHHHHHHHHHhhhcCCC
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------ATWYQIHVSAAKAAVDSITRSLALEWGTDY 150 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~y~~sK~a~~~~~~~la~el~~~~ 150 (218)
++.++.+++.. . +.++|++||...+. +..+...|+.+|.+.+.+++... .
T Consensus 84 ~~~~l~~aa~~----~---------g~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~-----~- 144 (299)
T PRK09987 84 SVEAIAKAANE----V---------GAWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHC-----A- 144 (299)
T ss_pred HHHHHHHHHHH----c---------CCeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhC-----C-
Confidence 99999988753 2 24699999965331 11244579999999988886542 2
Q ss_pred CeEEeeeecCcccCC
Q 027828 151 AIRVNGIAPGPIKDT 165 (218)
Q Consensus 151 gi~v~~v~pG~v~t~ 165 (218)
....++|+++..+
T Consensus 145 --~~~ilR~~~vyGp 157 (299)
T PRK09987 145 --KHLIFRTSWVYAG 157 (299)
T ss_pred --CEEEEecceecCC
Confidence 2366777777755
No 271
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.28 E-value=2.7e-05 Score=62.86 Aligned_cols=118 Identities=17% Similarity=0.142 Sum_probs=85.1
Q ss_pred CCCeeEEEecCC------CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHH
Q 027828 19 GIPAIGLEGDVR------KREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 92 (218)
Q Consensus 19 ~~~~~~~~~D~s------~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 92 (218)
..++..+.+|++ +....+.+.+ .+|.||||++....- ..+.+....|+.|+..+.+.+.
T Consensus 59 ~~ri~vv~gDl~e~~lGL~~~~~~~La~-------~vD~I~H~gA~Vn~v-------~pYs~L~~~NVlGT~evlrLa~- 123 (382)
T COG3320 59 ADRVEVVAGDLAEPDLGLSERTWQELAE-------NVDLIIHNAALVNHV-------FPYSELRGANVLGTAEVLRLAA- 123 (382)
T ss_pred cceEEEEecccccccCCCCHHHHHHHhh-------hcceEEecchhhccc-------CcHHHhcCcchHhHHHHHHHHh-
Confidence 468999999999 3445555555 589999999954321 1245667789999999998875
Q ss_pred HHHhcCCCCCCCCCCceEEEeccccccc--------------------CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCe
Q 027828 93 YLKKGGRGQASSSSGGIIINISATLHYT--------------------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAI 152 (218)
Q Consensus 93 ~~~~~~~~~~~~~~~~~iv~iss~~~~~--------------------~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi 152 (218)
+++ ...+.+|||++... .......|+-||++.+-+++.. . +.|+
T Consensus 124 ----~gk-------~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A----~-~rGL 187 (382)
T COG3320 124 ----TGK-------PKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREA----G-DRGL 187 (382)
T ss_pred ----cCC-------CceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHH----h-hcCC
Confidence 221 23499999987432 1123367999999998888875 3 4489
Q ss_pred EEeeeecCcccCCCc
Q 027828 153 RVNGIAPGPIKDTAG 167 (218)
Q Consensus 153 ~v~~v~pG~v~t~~~ 167 (218)
++..++||+|-.+..
T Consensus 188 pv~I~Rpg~I~gds~ 202 (382)
T COG3320 188 PVTIFRPGYITGDSR 202 (382)
T ss_pred CeEEEecCeeeccCc
Confidence 999999999965543
No 272
>PLN02778 3,5-epimerase/4-reductase
Probab=98.19 E-value=0.00011 Score=58.80 Aligned_cols=166 Identities=16% Similarity=0.102 Sum_probs=96.6
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHH
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCH 88 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 88 (218)
..+++.|.+.|.++.....|+.+.+.+...++.. ++|+|||.||....... +...+.-...+++|+.++.++++
T Consensus 23 ~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~~-----~~D~ViH~Aa~~~~~~~-~~~~~~p~~~~~~Nv~gt~~ll~ 96 (298)
T PLN02778 23 GLLGKLCQEQGIDFHYGSGRLENRASLEADIDAV-----KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLAD 96 (298)
T ss_pred HHHHHHHHhCCCEEEEecCccCCHHHHHHHHHhc-----CCCEEEECCcccCCCCc-hhhhhCHHHHHHHHHHHHHHHHH
Confidence 4466677777777776778888887766655532 68999999996542211 11112345688899999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCceEEEecccccc--------------c----CCcchhHhHHhHHHHHHHHHHHHhhhcCCC
Q 027828 89 EALKYLKKGGRGQASSSSGGIIINISATLHY--------------T----ATWYQIHVSAAKAAVDSITRSLALEWGTDY 150 (218)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~--------------~----~~~~~~~y~~sK~a~~~~~~~la~el~~~~ 150 (218)
++... + .+++++||...+ . +.+....|+.+|.+.+.+++.++. ..
T Consensus 97 aa~~~----g---------v~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~----~~ 159 (298)
T PLN02778 97 VCRER----G---------LVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN----VC 159 (298)
T ss_pred HHHHh----C---------CCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc----cE
Confidence 98642 2 234555543211 0 011235799999999999987642 22
Q ss_pred CeEEeeeecCcccCCCccCCCChHHHHHhhhhhc---CCCC-CCCHHHHHHHHHHhccC
Q 027828 151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATDYM---AAYK-FGEKWDIAMAALYLASD 205 (218)
Q Consensus 151 gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~e~a~~~~~L~s~ 205 (218)
++|+ ++...+.. .....+........ ...+ +...+|++++++.++..
T Consensus 160 ~lr~-----~~~~~~~~---~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l~~ 210 (298)
T PLN02778 160 TLRV-----RMPISSDL---SNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKR 210 (298)
T ss_pred Eeee-----cccCCccc---ccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHHhC
Confidence 4554 22111100 01111222222211 1112 45678999998988853
No 273
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.18 E-value=4.2e-05 Score=67.75 Aligned_cols=116 Identities=14% Similarity=0.050 Sum_probs=79.2
Q ss_pred CCeeEEEecCCCHHHH--HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc
Q 027828 20 IPAIGLEGDVRKREDA--VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 97 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~--~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 97 (218)
.++.++.+|+++++.. ....+.+ .++|+|||+|+..... . ......++|+.++.++.+++. +.
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l----~~~D~Vih~Aa~~~~~----~---~~~~~~~~nv~gt~~ll~~a~----~~ 115 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL----GDIDHVVHLAAIYDLT----A---DEEAQRAANVDGTRNVVELAE----RL 115 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh----cCCCEEEECceeecCC----C---CHHHHHHHHhHHHHHHHHHHH----hc
Confidence 4688899999985320 1111222 4799999999964321 1 134566889999888887764 33
Q ss_pred CCCCCCCCCCceEEEecccccccCC-------------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccC
Q 027828 98 GRGQASSSSGGIIINISATLHYTAT-------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164 (218)
Q Consensus 98 ~~~~~~~~~~~~iv~iss~~~~~~~-------------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t 164 (218)
+ ..++|++||...+... .....|+.+|...+.+++. ..|+++..++|+.+..
T Consensus 116 ~--------~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~-------~~g~~~~ilRp~~v~G 180 (657)
T PRK07201 116 Q--------AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE-------ECGLPWRVYRPAVVVG 180 (657)
T ss_pred C--------CCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHH-------cCCCcEEEEcCCeeee
Confidence 3 4679999997654211 1224699999999888753 3379999999999986
Q ss_pred C
Q 027828 165 T 165 (218)
Q Consensus 165 ~ 165 (218)
+
T Consensus 181 ~ 181 (657)
T PRK07201 181 D 181 (657)
T ss_pred c
Confidence 5
No 274
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.15 E-value=1e-05 Score=62.15 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=61.2
Q ss_pred HHHHHHHHHhcCCCeeEE------------EecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGL------------EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 75 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~------------~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~ 75 (218)
...+++.+.+.|.++..+ .+|+++.+++.++++.+.+.++++|++|||||+....++.+.+.++|+++
T Consensus 28 G~AIA~~la~~Ga~Vvlv~~~~~l~~~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~~~~~~~s~e~~~~~ 107 (227)
T TIGR02114 28 GKIITETFLSAGHEVTLVTTKRALKPEPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDYTPVYMTDLEQVQAS 107 (227)
T ss_pred HHHHHHHHHHCCCEEEEEcChhhcccccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccccchhhCCHHHHhhh
Confidence 455667777777655432 47999999999999999999999999999999877788889999999977
Q ss_pred HhhhhhhHHHHHH
Q 027828 76 IEIDSVGTFIMCH 88 (218)
Q Consensus 76 ~~~n~~~~~~l~~ 88 (218)
+. .+.+.+.+
T Consensus 108 ~~---~~~~~~~~ 117 (227)
T TIGR02114 108 DN---LNEFLSKQ 117 (227)
T ss_pred cc---hhhhhccc
Confidence 44 45555544
No 275
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.07 E-value=0.00012 Score=61.93 Aligned_cols=137 Identities=14% Similarity=0.019 Sum_probs=87.7
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC------
Q 027828 48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 121 (218)
Q Consensus 48 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------ 121 (218)
.+|+|||.|+...+.... .+-...+++|+.++.++.+++.. .+ .++|++||...+..
T Consensus 183 ~~D~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gt~nLleaa~~----~g---------~r~V~~SS~~VYg~~~~~p~ 245 (442)
T PLN02206 183 EVDQIYHLACPASPVHYK----FNPVKTIKTNVVGTLNMLGLAKR----VG---------ARFLLTSTSEVYGDPLQHPQ 245 (442)
T ss_pred CCCEEEEeeeecchhhhh----cCHHHHHHHHHHHHHHHHHHHHH----hC---------CEEEEECChHHhCCCCCCCC
Confidence 589999999864422111 12356789999999999988753 22 47999999865421
Q ss_pred ----------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCC--CChHHHHHhhhhhcC----
Q 027828 122 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDYMA---- 185 (218)
Q Consensus 122 ----------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~---- 185 (218)
......|+.+|.+.+.+++.+..+ +|+.+..++|+.+..+..... ..-..+.......-+
T Consensus 246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~----~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~ 321 (442)
T PLN02206 246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG----ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY 321 (442)
T ss_pred CccccccCCCCCccchHHHHHHHHHHHHHHHHHH----hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEe
Confidence 112457999999999888876443 368999999988886642211 111122222221111
Q ss_pred -----CCCCCCHHHHHHHHHHhccC
Q 027828 186 -----AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 186 -----~~~~~~~~e~a~~~~~L~s~ 205 (218)
.+-+...+|++++++.++..
T Consensus 322 g~G~~~rdfi~V~Dva~ai~~a~e~ 346 (442)
T PLN02206 322 GDGKQTRSFQFVSDLVEGLMRLMEG 346 (442)
T ss_pred CCCCEEEeEEeHHHHHHHHHHHHhc
Confidence 11245689999999988753
No 276
>PLN02996 fatty acyl-CoA reductase
Probab=98.01 E-value=6.2e-05 Score=64.39 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=81.6
Q ss_pred CCeeEEEecCCCH-------HHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHH
Q 027828 20 IPAIGLEGDVRKR-------EDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALK 92 (218)
Q Consensus 20 ~~~~~~~~D~s~~-------~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 92 (218)
.++.++.+|++++ +.++.+.+ .+|+|||+|+.... . +..+..+++|+.++..+++++..
T Consensus 84 ~kv~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---~----~~~~~~~~~Nv~gt~~ll~~a~~ 149 (491)
T PLN02996 84 EKVTPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---D----ERYDVALGINTLGALNVLNFAKK 149 (491)
T ss_pred cCEEEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC---c----CCHHHHHHHHHHHHHHHHHHHHh
Confidence 4788999999843 33334433 68999999996542 1 23567889999999999988753
Q ss_pred HHHhcCCCCCCCCCCceEEEecccccccCC---------c----------------------------------------
Q 027828 93 YLKKGGRGQASSSSGGIIINISATLHYTAT---------W---------------------------------------- 123 (218)
Q Consensus 93 ~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---------~---------------------------------------- 123 (218)
. .+ -.++|++||...+... +
T Consensus 150 ~---~~--------~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (491)
T PLN02996 150 C---VK--------VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQA 218 (491)
T ss_pred c---CC--------CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHH
Confidence 1 11 3469999987643210 0
Q ss_pred -------------chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCC
Q 027828 124 -------------YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTA 166 (218)
Q Consensus 124 -------------~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~ 166 (218)
....|+.+|++.+.+++.. . . |+.+..++|..|..+.
T Consensus 219 ~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~----~-~-~lpv~i~RP~~V~G~~ 268 (491)
T PLN02996 219 MKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF----K-E-NLPLVIIRPTMITSTY 268 (491)
T ss_pred hhhhchhHHHhCCCCCchHhhHHHHHHHHHHh----c-C-CCCEEEECCCEeccCC
Confidence 1134999999999888653 2 3 7999999999997654
No 277
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.01 E-value=4e-05 Score=60.62 Aligned_cols=119 Identities=17% Similarity=0.126 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHH
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 85 (218)
+.+.++.+...+ +.++.++.+|+.|.+.++++++.. ++|.|+|-|+...... +.+.-.+..+.|+.|++.
T Consensus 41 ~sl~r~~~l~~~-~~~v~f~~~Dl~D~~~L~kvF~~~-----~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtln 110 (343)
T KOG1371|consen 41 ESLKRVRQLLGE-GKSVFFVEGDLNDAEALEKLFSEV-----KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLN 110 (343)
T ss_pred hHHHHHHHhcCC-CCceEEEEeccCCHHHHHHHHhhc-----CCceEEeehhhhccch----hhhCchhheehhhhhHHH
Confidence 444444443332 578999999999999999999876 6999999999655432 333346788899999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------CCc-chhHhHHhHHHHHHHHHHHHhhh
Q 027828 86 MCHEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------ATW-YQIHVSAAKAAVDSITRSLALEW 146 (218)
Q Consensus 86 l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~~~-~~~~y~~sK~a~~~~~~~la~el 146 (218)
++..... .+ -..+|+.||..-+. +.. +...|+.+|.+++.+.+.+..-+
T Consensus 111 lLe~~~~----~~--------~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~ 171 (343)
T KOG1371|consen 111 LLEVMKA----HN--------VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAY 171 (343)
T ss_pred HHHHHHH----cC--------CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhccc
Confidence 9877643 33 35689998877442 222 67789999999999999886543
No 278
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.00 E-value=0.00023 Score=63.36 Aligned_cols=129 Identities=17% Similarity=0.125 Sum_probs=85.9
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
...+.+.|.+.|.++.+...|++|.+.+..++... ++|+|||.|+....... +...++-...+++|+.++.+++
T Consensus 393 G~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~~-----~pd~Vih~Aa~~~~~~~-~~~~~~~~~~~~~N~~gt~~l~ 466 (668)
T PLN02260 393 GGLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRNV-----KPTHVFNAAGVTGRPNV-DWCESHKVETIRANVVGTLTLA 466 (668)
T ss_pred HHHHHHHHHhCCCeEEeeccccccHHHHHHHHHhh-----CCCEEEECCcccCCCCC-ChHHhCHHHHHHHHhHHHHHHH
Confidence 44566777666666656678999998887776653 79999999996532111 1222344678889999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCceEEEeccccccc-----------C-------CcchhHhHHhHHHHHHHHHHHHhhhcCC
Q 027828 88 HEALKYLKKGGRGQASSSSGGIIINISATLHYT-----------A-------TWYQIHVSAAKAAVDSITRSLALEWGTD 149 (218)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~-----------~-------~~~~~~y~~sK~a~~~~~~~la~el~~~ 149 (218)
+++.. .+ .++|++||...+. + .+....|+.+|.+.+.+++.+.. -
T Consensus 467 ~a~~~----~g---------~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~----~ 529 (668)
T PLN02260 467 DVCRE----NG---------LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDN----V 529 (668)
T ss_pred HHHHH----cC---------CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhh----h
Confidence 99864 22 3466665533110 1 12236799999999999987632 2
Q ss_pred CCeEEeeeec
Q 027828 150 YAIRVNGIAP 159 (218)
Q Consensus 150 ~gi~v~~v~p 159 (218)
..+|+..+..
T Consensus 530 ~~~r~~~~~~ 539 (668)
T PLN02260 530 CTLRVRMPIS 539 (668)
T ss_pred eEEEEEEecc
Confidence 3567776664
No 279
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.99 E-value=0.00021 Score=57.71 Aligned_cols=146 Identities=13% Similarity=-0.006 Sum_probs=86.2
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
.+.++.+|++|++++..+++ ++|+|||.++.... +.....++|+.++.++.+++. +.+
T Consensus 44 ~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa~----~~g-- 101 (317)
T CHL00194 44 GAELVYGDLSLPETLPPSFK-------GVTAIIDASTSRPS---------DLYNAKQIDWDGKLALIEAAK----AAK-- 101 (317)
T ss_pred CCEEEECCCCCHHHHHHHHC-------CCCEEEECCCCCCC---------CccchhhhhHHHHHHHHHHHH----HcC--
Confidence 47788999999988776654 68999998763211 112345677888877777764 333
Q ss_pred CCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHh-
Q 027828 101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK- 179 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~- 179 (218)
-.++|++||.++.. + +...|..+|...+.+.+ .+|+....++|+.+......... .+.....
T Consensus 102 ------vkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~--------~~~l~~tilRp~~~~~~~~~~~~-~~~~~~~~ 164 (317)
T CHL00194 102 ------IKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLK--------KSGIPYTIFRLAGFFQGLISQYA-IPILEKQP 164 (317)
T ss_pred ------CCEEEEeccccccc-c-CCChHHHHHHHHHHHHH--------HcCCCeEEEeecHHhhhhhhhhh-hhhccCCc
Confidence 35899999865421 1 22456777877665543 34688888999866432111000 0000000
Q ss_pred --hhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 180 --ATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 180 --~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
.........+...+|+|+++..++..
T Consensus 165 ~~~~~~~~~~~~i~v~Dva~~~~~~l~~ 192 (317)
T CHL00194 165 IWITNESTPISYIDTQDAAKFCLKSLSL 192 (317)
T ss_pred eEecCCCCccCccCHHHHHHHHHHHhcC
Confidence 00000011234669999999988754
No 280
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=97.98 E-value=0.00042 Score=58.45 Aligned_cols=136 Identities=12% Similarity=0.017 Sum_probs=87.5
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC------
Q 027828 48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA------ 121 (218)
Q Consensus 48 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~------ 121 (218)
++|+|||.|+........ . +-...+++|+.++.+++.++... ..++|++||...+..
T Consensus 184 ~~D~ViHlAa~~~~~~~~-~---~p~~~~~~Nv~gT~nLleaa~~~-------------g~r~V~~SS~~VYg~~~~~p~ 246 (436)
T PLN02166 184 EVDQIYHLACPASPVHYK-Y---NPVKTIKTNVMGTLNMLGLAKRV-------------GARFLLTSTSEVYGDPLEHPQ 246 (436)
T ss_pred CCCEEEECceeccchhhc-c---CHHHHHHHHHHHHHHHHHHHHHh-------------CCEEEEECcHHHhCCCCCCCC
Confidence 689999999864332111 1 23567889999999999887532 246999999764321
Q ss_pred ----------CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCC--CChHHHHHhhhhhcC----
Q 027828 122 ----------TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSK--LAPEEIRSKATDYMA---- 185 (218)
Q Consensus 122 ----------~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~---- 185 (218)
..+...|+.+|.+.+.+++.+... +|+.+..++|+.+..+..... ..-..+......+.+
T Consensus 247 ~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~----~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~ 322 (436)
T PLN02166 247 KETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG----AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVY 322 (436)
T ss_pred CccccccCCCCCCCCchHHHHHHHHHHHHHHHHH----hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEe
Confidence 112456999999999998887553 368899999998887642211 111122222222111
Q ss_pred -----CCCCCCHHHHHHHHHHhcc
Q 027828 186 -----AYKFGEKWDIAMAALYLAS 204 (218)
Q Consensus 186 -----~~~~~~~~e~a~~~~~L~s 204 (218)
.+-+...+|+++++..++.
T Consensus 323 g~g~~~rdfi~V~Dva~ai~~~~~ 346 (436)
T PLN02166 323 GDGKQTRSFQYVSDLVDGLVALME 346 (436)
T ss_pred CCCCeEEeeEEHHHHHHHHHHHHh
Confidence 1124567999999998875
No 281
>PRK05865 hypothetical protein; Provisional
Probab=97.97 E-value=9.6e-05 Score=66.65 Aligned_cols=124 Identities=14% Similarity=0.039 Sum_probs=83.8
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
++.++.+|++|.+++.++++ ++|+|||+|+.... .+++|+.++.++++++ .+.+
T Consensus 41 ~v~~v~gDL~D~~~l~~al~-------~vD~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~g-- 94 (854)
T PRK05865 41 SADFIAADIRDATAVESAMT-------GADVVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETG-- 94 (854)
T ss_pred CceEEEeeCCCHHHHHHHHh-------CCCEEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcC--
Confidence 35678899999998887765 58999999985321 3578898888776664 3444
Q ss_pred CCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHhh
Q 027828 101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~ 180 (218)
.++||++||.. |.+.+.+++ .+|+.+..++|+.+..+.. ..+....
T Consensus 95 ------vkr~V~iSS~~--------------K~aaE~ll~--------~~gl~~vILRp~~VYGP~~------~~~i~~l 140 (854)
T PRK05865 95 ------TGRIVFTSSGH--------------QPRVEQMLA--------DCGLEWVAVRCALIFGRNV------DNWVQRL 140 (854)
T ss_pred ------CCeEEEECCcH--------------HHHHHHHHH--------HcCCCEEEEEeceEeCCCh------HHHHHHH
Confidence 46899999863 766665543 3479999999999987631 1111111
Q ss_pred hh--hcCCC------CCCCHHHHHHHHHHhcc
Q 027828 181 TD--YMAAY------KFGEKWDIAMAALYLAS 204 (218)
Q Consensus 181 ~~--~~~~~------~~~~~~e~a~~~~~L~s 204 (218)
.. ..+.+ .+...+|+++++..++.
T Consensus 141 l~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~ 172 (854)
T PRK05865 141 FALPVLPAGYADRVVQVVHSDDAQRLLVRALL 172 (854)
T ss_pred hcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence 11 11111 24567999999998874
No 282
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.96 E-value=0.00073 Score=64.97 Aligned_cols=158 Identities=11% Similarity=0.098 Sum_probs=97.3
Q ss_pred CeeEEEecCCCHHHH--HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 21 PAIGLEGDVRKREDA--VRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~--~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
++.++.+|++++.-- ...++.+. ..+|++||+|+.... ..+ +......|+.++.++++.+.. .+
T Consensus 1035 ~i~~~~gDl~~~~lgl~~~~~~~l~---~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a~~----~~ 1100 (1389)
T TIGR03443 1035 RIEVVLGDLSKEKFGLSDEKWSDLT---NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLCAE----GK 1100 (1389)
T ss_pred ceEEEeccCCCccCCcCHHHHHHHH---hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHHHh----CC
Confidence 688899999864210 11122222 369999999996431 122 334456799999999987742 22
Q ss_pred CCCCCCCCCceEEEecccccccC-----------------C-----------cchhHhHHhHHHHHHHHHHHHhhhcCCC
Q 027828 99 RGQASSSSGGIIINISATLHYTA-----------------T-----------WYQIHVSAAKAAVDSITRSLALEWGTDY 150 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~-----------------~-----------~~~~~y~~sK~a~~~~~~~la~el~~~~ 150 (218)
..+++++||...+.. . .....|+.+|.+.+.+++..+ ..
T Consensus 1101 --------~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~-----~~ 1167 (1389)
T TIGR03443 1101 --------AKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAG-----KR 1167 (1389)
T ss_pred --------CceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHH-----hC
Confidence 457999999754321 0 012359999999998887642 33
Q ss_pred CeEEeeeecCcccCCCccCCCChHHHHHhhhh------hcCC----CCCCCHHHHHHHHHHhccC
Q 027828 151 AIRVNGIAPGPIKDTAGVSKLAPEEIRSKATD------YMAA----YKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 151 gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~------~~~~----~~~~~~~e~a~~~~~L~s~ 205 (218)
|+.+..++||.+..+..........+...... ..|. .-+...++++++++.++..
T Consensus 1168 g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~ 1232 (1389)
T TIGR03443 1168 GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALN 1232 (1389)
T ss_pred CCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhC
Confidence 89999999999986533322222222222221 1121 1244578999999988753
No 283
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=97.41 E-value=0.0056 Score=48.43 Aligned_cols=142 Identities=11% Similarity=0.023 Sum_probs=75.1
Q ss_pred HHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccC--
Q 027828 44 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTA-- 121 (218)
Q Consensus 44 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-- 121 (218)
..+.++|+|||++|..... .....+.....+++|+.++..+.+++.. .+.+ ...+|+.|+...+..
T Consensus 53 ~~~~~~D~Vvh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~------~~~~i~~S~~~~yg~~~ 120 (292)
T TIGR01777 53 EALEGADAVINLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAIAA----AEQK------PKVFISASAVGYYGTSE 120 (292)
T ss_pred hhcCCCCEEEECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCC------ceEEEEeeeEEEeCCCC
Confidence 3456899999999964321 1223344566778999998888888753 2200 123444444322110
Q ss_pred ---C-----c-chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHhh---hhh-----c
Q 027828 122 ---T-----W-YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA---TDY-----M 184 (218)
Q Consensus 122 ---~-----~-~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~-----~ 184 (218)
. + ....|+..+...+...+ .+. ..++.+..++|+.+..+... .. ..+.... ... .
T Consensus 121 ~~~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~-~~~~~~~ilR~~~v~G~~~~--~~-~~~~~~~~~~~~~~~g~~~ 192 (292)
T TIGR01777 121 DRVFTEEDSPAGDDFLAELCRDWEEAAQ----AAE-DLGTRVVLLRTGIVLGPKGG--AL-AKMLPPFRLGLGGPLGSGR 192 (292)
T ss_pred CCCcCcccCCCCCChHHHHHHHHHHHhh----hch-hcCCceEEEeeeeEECCCcc--hh-HHHHHHHhcCcccccCCCC
Confidence 0 1 11122222323322222 223 45799999999999876311 11 1111101 000 1
Q ss_pred CCCCCCCHHHHHHHHHHhccC
Q 027828 185 AAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 185 ~~~~~~~~~e~a~~~~~L~s~ 205 (218)
...-+...+|+++++..++..
T Consensus 193 ~~~~~i~v~Dva~~i~~~l~~ 213 (292)
T TIGR01777 193 QWFSWIHIEDLVQLILFALEN 213 (292)
T ss_pred cccccEeHHHHHHHHHHHhcC
Confidence 112346789999999999864
No 284
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.40 E-value=0.00041 Score=54.08 Aligned_cols=123 Identities=19% Similarity=0.130 Sum_probs=89.7
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.+++.+.+|++|...+.++++.+ .+|-|+|-++.+.. ..+.+.-+...+++..|++.++.++.-.- ..
T Consensus 55 ~~l~l~~gDLtD~~~l~r~l~~v-----~PdEIYNLaAQS~V----~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~- 122 (345)
T COG1089 55 PRLHLHYGDLTDSSNLLRILEEV-----QPDEIYNLAAQSHV----GVSFEQPEYTADVDAIGTLRLLEAIRILG--EK- 122 (345)
T ss_pred ceeEEEeccccchHHHHHHHHhc-----Cchhheeccccccc----cccccCcceeeeechhHHHHHHHHHHHhC--Cc-
Confidence 45788999999999999999987 79999998885443 33344446678899999999998875322 11
Q ss_pred CCCCCCCCceEEEecccccc-----------cCCcchhHhHHhHHHHHHHHHHHHhhhc--CCCCeEEeeeecCc
Q 027828 100 GQASSSSGGIIINISATLHY-----------TATWYQIHVSAAKAAVDSITRSLALEWG--TDYAIRVNGIAPGP 161 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~-----------~~~~~~~~y~~sK~a~~~~~~~la~el~--~~~gi~v~~v~pG~ 161 (218)
..+|..-||..-+ .++.+.+.|+++|.....++...+..+. -..||-+|.=+|.-
T Consensus 123 -------~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~R 190 (345)
T COG1089 123 -------KTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLR 190 (345)
T ss_pred -------ccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCC
Confidence 3567776665422 2455788999999999988888876542 15577788777653
No 285
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.30 E-value=0.00045 Score=63.19 Aligned_cols=125 Identities=18% Similarity=0.127 Sum_probs=106.3
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHH
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHE 89 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~ 89 (218)
..++..+..|.++.+-..|+++.+..+.++++. .+.+.+.+++|-|.+..+.-+++.+++.|+.+-+..+.+++++-+.
T Consensus 1811 ~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~ 1889 (2376)
T KOG1202|consen 1811 LMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-NKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRV 1889 (2376)
T ss_pred HHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-hhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhh
Confidence 356667778888888889999999999998864 4568999999999999999999999999999999999999988766
Q ss_pred HHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhh
Q 027828 90 ALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALE 145 (218)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~e 145 (218)
-...-.. ---||.+||...-++..++..|+-+.++|+.++..-..+
T Consensus 1890 sRe~C~~----------LdyFv~FSSvscGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1890 SREICPE----------LDYFVVFSSVSCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred hhhhCcc----------cceEEEEEeecccCCCCcccccchhhHHHHHHHHHhhhc
Confidence 5544333 245999999999999999999999999999999986554
No 286
>PLN02503 fatty acyl-CoA reductase 2
Probab=97.28 E-value=0.0086 Score=52.46 Aligned_cols=73 Identities=18% Similarity=0.295 Sum_probs=51.5
Q ss_pred CCeeEEEecCCCHH------HHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHH
Q 027828 20 IPAIGLEGDVRKRE------DAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKY 93 (218)
Q Consensus 20 ~~~~~~~~D~s~~~------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 93 (218)
.++..+.+|++++. ..+.+.+ .+|+|||.|+.... .+.++..+++|+.++.++++.+...
T Consensus 192 ~Ki~~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-------~~~~~~a~~vNV~GT~nLLelA~~~ 257 (605)
T PLN02503 192 SKLVPVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-------DERYDVAIDINTRGPCHLMSFAKKC 257 (605)
T ss_pred ccEEEEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-------ccCHHHHHHHHHHHHHHHHHHHHHc
Confidence 36889999999872 3333222 59999999996531 1346778899999999999887532
Q ss_pred HHhcCCCCCCCCCCceEEEecccc
Q 027828 94 LKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 94 ~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
.. ..++|++||..
T Consensus 258 ---~~--------lk~fV~vSTay 270 (605)
T PLN02503 258 ---KK--------LKLFLQVSTAY 270 (605)
T ss_pred ---CC--------CCeEEEccCce
Confidence 11 24588888865
No 287
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.21 E-value=0.0052 Score=46.56 Aligned_cols=156 Identities=14% Similarity=0.044 Sum_probs=89.3
Q ss_pred EecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC--CCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCC
Q 027828 26 EGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE--DLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQAS 103 (218)
Q Consensus 26 ~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~ 103 (218)
.+|+++.++++++++.. ++.++||.|+... +-+. ..+.+=|...+++| -+.++.+..+-.+
T Consensus 38 d~DLt~~a~t~~lF~~e-----kPthVIhlAAmVG-Glf~N~~ynldF~r~Nl~in----dNVlhsa~e~gv~------- 100 (315)
T KOG1431|consen 38 DADLTNLADTRALFESE-----KPTHVIHLAAMVG-GLFHNNTYNLDFIRKNLQIN----DNVLHSAHEHGVK------- 100 (315)
T ss_pred cccccchHHHHHHHhcc-----CCceeeehHhhhc-chhhcCCCchHHHhhcceec----hhHHHHHHHhchh-------
Confidence 59999999999999975 7888888887432 1111 23344444444333 2333333322111
Q ss_pred CCCCceEEEecccccc----------------cCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCc
Q 027828 104 SSSGGIIINISATLHY----------------TATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAG 167 (218)
Q Consensus 104 ~~~~~~iv~iss~~~~----------------~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~ 167 (218)
++|+..|.+-+ -+.|....|+.+|..+.-..+..+++.+ -...++.|-.+..|.-
T Consensus 101 -----K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg----~~~tsviPtNvfGphD 171 (315)
T KOG1431|consen 101 -----KVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHG----RDYTSVIPTNVFGPHD 171 (315)
T ss_pred -----hhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhC----CceeeeccccccCCCC
Confidence 13333232210 1345667899999888777788887765 4455555655555432
Q ss_pred cCCCC----hHHHHH--------------hhhhhcCCCCCCCHHHHHHHHHHhccCCC
Q 027828 168 VSKLA----PEEIRS--------------KATDYMAAYKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 168 ~~~~~----~~~~~~--------------~~~~~~~~~~~~~~~e~a~~~~~L~s~~~ 207 (218)
...+. -+.++. -+....|++.+....|+|++.+|++..-.
T Consensus 172 Nfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y~ 229 (315)
T KOG1431|consen 172 NFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREYE 229 (315)
T ss_pred CCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhhc
Confidence 22221 111211 12233566667778999999999997543
No 288
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=96.84 E-value=0.034 Score=43.52 Aligned_cols=183 Identities=13% Similarity=0.097 Sum_probs=92.1
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHH----HHHHHHHHhC-CccEEEeCCCCCCCCC-CCCCCHHHHHHHHhhhhhh
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVR----VVESTINHFG-KLDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~----~~~~~~~~~~-~ld~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~ 82 (218)
..+...+.+.|-++..+.=+....+.-.. ..+.+..... .+|+|||-||.+-... +. .+.=+ .-..+
T Consensus 12 ~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt---~~~K~----~i~~S 84 (297)
T COG1090 12 RALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRWT---EKQKE----EIRQS 84 (297)
T ss_pred HHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccCC---HHHHH----HHHHH
Confidence 45677777777777776655554443222 3344444333 7999999999543222 22 22112 22446
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHh----HHHHHHHHHHHHhhh--cCCCCeEEee
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAA----KAAVDSITRSLALEW--GTDYAIRVNG 156 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s----K~a~~~~~~~la~el--~~~~gi~v~~ 156 (218)
.+..++.+.....+... ..++..-+|..++.+......|.-. .-.+..+++.+-.+- ++..|+||..
T Consensus 85 Ri~~T~~L~e~I~~~~~-------~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvl 157 (297)
T COG1090 85 RINTTEKLVELIAASET-------KPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVL 157 (297)
T ss_pred HhHHHHHHHHHHHhccC-------CCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEE
Confidence 66777777776664431 2333333344455444322222111 112233333332221 1256899999
Q ss_pred eecCcccCCCccC--CCChHHHHHhhhhhcCCCC----CCCHHHHHHHHHHhccCC
Q 027828 157 IAPGPIKDTAGVS--KLAPEEIRSKATDYMAAYK----FGEKWDIAMAALYLASDA 206 (218)
Q Consensus 157 v~pG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~e~a~~~~~L~s~~ 206 (218)
++-|.|..+..-. .+-+ .+.-....+.-.+| +...+|+++++.|++.+.
T Consensus 158 lRtGvVLs~~GGaL~~m~~-~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~ 212 (297)
T COG1090 158 LRTGVVLSPDGGALGKMLP-LFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE 212 (297)
T ss_pred EEEEEEecCCCcchhhhcc-hhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 9999997643111 1100 00001111111111 346799999999999753
No 289
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=96.82 E-value=0.0069 Score=49.46 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=84.1
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++..+.+|+.+..++...++ +. .+||+|....+. ....+-+..+++|+.|+.++..++. +.+
T Consensus 55 ~~v~~~~~D~~~~~~i~~a~~-------~~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c~----~~~- 117 (361)
T KOG1430|consen 55 GRVTVILGDLLDANSISNAFQ-------GA-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEACK----ELG- 117 (361)
T ss_pred CceeEEecchhhhhhhhhhcc-------Cc-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHHH----HhC-
Confidence 456777888888877766655 56 666666654332 2222567889999999888887775 344
Q ss_pred CCCCCCCCceEEEeccccccc------------CCcch--hHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCC
Q 027828 100 GQASSSSGGIIINISATLHYT------------ATWYQ--IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~------------~~~~~--~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~ 165 (218)
-.++|++||..-.. ++|.. ..|+.+|+-.+.+++.... ..+....+++|-.|..|
T Consensus 118 -------v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~----~~~l~T~aLR~~~IYGp 186 (361)
T KOG1430|consen 118 -------VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG----SDDLYTCALRPPGIYGP 186 (361)
T ss_pred -------CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC----CCCeeEEEEccccccCC
Confidence 46799999977432 33422 4899999988888887543 33589999999999976
Q ss_pred C
Q 027828 166 A 166 (218)
Q Consensus 166 ~ 166 (218)
.
T Consensus 187 g 187 (361)
T KOG1430|consen 187 G 187 (361)
T ss_pred C
Confidence 4
No 290
>PRK08309 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0066 Score=44.76 Aligned_cols=143 Identities=13% Similarity=0.044 Sum_probs=88.2
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++.+...+.. +.++.++.+|++|++++..+++.+.+.++++|++|+..-...
T Consensus 30 ~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~~~--------------------- 87 (177)
T PRK08309 30 ARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHSSA--------------------- 87 (177)
T ss_pred ECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEeccccc---------------------
Confidence 5777777776665543 457888999999999999999999999999999997665322
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+-.+..++-..-.+.+ .-+++.+-...+.-+ +..+..+. ..++...-|..|+
T Consensus 88 -~~~~~~~~~~~gv~~~--------~~~~~h~~gs~~~~~------------------~~~~~~~~-~~~~~~~~i~lgf 139 (177)
T PRK08309 88 -KDALSVVCRELDGSSE--------TYRLFHVLGSAASDP------------------RIPSEKIG-PARCSYRRVILGF 139 (177)
T ss_pred -hhhHHHHHHHHccCCC--------CceEEEEeCCcCCch------------------hhhhhhhh-hcCCceEEEEEeE
Confidence 2222233222111111 236888765443110 11112222 3345666788888
Q ss_pred ccCCCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhcc-CCCcccccc
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLAS-DAAVHRDLI 213 (218)
Q Consensus 162 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s-~~~~~~~g~ 213 (218)
+.++. ..|+.|-+|+++.++.-+. +...++-|.
T Consensus 140 ~~~~~-------------------~~rwlt~~ei~~gv~~~~~~~~~~~~~g~ 173 (177)
T PRK08309 140 VLEDT-------------------YSRWLTHEEISDGVIKAIESDADEHVVGT 173 (177)
T ss_pred EEeCC-------------------ccccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence 87542 2356788899988886664 344455553
No 291
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=96.40 E-value=0.079 Score=41.90 Aligned_cols=139 Identities=14% Similarity=0.006 Sum_probs=76.4
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCC-ccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGK-LDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~-ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
+..+.+|+.|++++..+++.. +.+.. +|.++++++... +.. ...+.++...++.+
T Consensus 41 ~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~~~~~~~---------~~~------------~~~~~~i~aa~~~g-- 96 (285)
T TIGR03649 41 EKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYLVAPPIP---------DLA------------PPMIKFIDFARSKG-- 96 (285)
T ss_pred CccccccCCCHHHHHHHHhcc-cCcCCceeEEEEeCCCCC---------Chh------------HHHHHHHHHHHHcC--
Confidence 345688999999998887543 22335 899998876321 001 11133444555555
Q ss_pred CCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCC-CCeEEeeeecCcccCCCccCCCChHHHHH-
Q 027828 101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIRVNGIAPGPIKDTAGVSKLAPEEIRS- 178 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~-~gi~v~~v~pG~v~t~~~~~~~~~~~~~~- 178 (218)
-.+||++||.....+.+ .+..++.+. . . .|+....++|+++..+....... .....
T Consensus 97 ------v~~~V~~Ss~~~~~~~~-------~~~~~~~~l-------~-~~~gi~~tilRp~~f~~~~~~~~~~-~~~~~~ 154 (285)
T TIGR03649 97 ------VRRFVLLSASIIEKGGP-------AMGQVHAHL-------D-SLGGVEYTVLRPTWFMENFSEEFHV-EAIRKE 154 (285)
T ss_pred ------CCEEEEeeccccCCCCc-------hHHHHHHHH-------H-hccCCCEEEEeccHHhhhhcccccc-cccccC
Confidence 57899999865433221 122222222 1 3 37999999999876443111000 00000
Q ss_pred -hhhhh--cCCCCCCCHHHHHHHHHHhccCC
Q 027828 179 -KATDY--MAAYKFGEKWDIAMAALYLASDA 206 (218)
Q Consensus 179 -~~~~~--~~~~~~~~~~e~a~~~~~L~s~~ 206 (218)
.+... .....+..++|+|+++..++.+.
T Consensus 155 ~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~ 185 (285)
T TIGR03649 155 NKIYSATGDGKIPFVSADDIARVAYRALTDK 185 (285)
T ss_pred CeEEecCCCCccCcccHHHHHHHHHHHhcCC
Confidence 00000 01112568899999999888754
No 292
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=96.34 E-value=0.071 Score=43.22 Aligned_cols=51 Identities=14% Similarity=0.201 Sum_probs=42.5
Q ss_pred CCCcHHHHHHHHHHHHhcC----CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 1 MGRRKTVLRSAVAALHSLG----IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
.|||+++|+++.+++.+.. .+...+.||.+|++++.+++.+ -.+|||++|-
T Consensus 39 AGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~-------~~vivN~vGP 93 (423)
T KOG2733|consen 39 AGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ-------ARVIVNCVGP 93 (423)
T ss_pred ecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh-------hEEEEecccc
Confidence 4899999999999998754 2344889999999999998875 4899999993
No 293
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=96.31 E-value=0.18 Score=43.88 Aligned_cols=178 Identities=14% Similarity=0.040 Sum_probs=102.5
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHh----C----------CccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHH
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHF----G----------KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTF 84 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~----~----------~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~ 84 (218)
|..+.++.+++++..+++.+++.|-..- | .++.++=-|.......+.+..... +..+++-+....
T Consensus 450 ga~LwvVpaN~~SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~ 528 (866)
T COG4982 450 GAALWVVPANMGSYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVL 528 (866)
T ss_pred CceEEEEeccccchhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHH
Confidence 4567788999999999999999996421 1 355666555544434555554432 333444444444
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccC
Q 027828 85 IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKD 164 (218)
Q Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t 164 (218)
.++-.+ .+++..+. ...+-++|.-.|.. ...+-+...|+-+|++++.++..+..|-.=..-+.+..-..||+..
T Consensus 529 Rliggl----~~~~s~r~-v~~R~hVVLPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrG 602 (866)
T COG4982 529 RLIGGL----KKQGSSRG-VDTRLHVVLPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRG 602 (866)
T ss_pred HHHHHh----hhhccccC-cccceEEEecCCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecc
Confidence 444333 33322110 01134555544432 2234567889999999999999888774201135566666788875
Q ss_pred CCccCCCChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhccCCC
Q 027828 165 TAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAA 207 (218)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~ 207 (218)
+.. +..++..-....+.-. +..+++|+|..++-||+.+.
T Consensus 603 TGL---Mg~Ndiiv~aiEk~GV-~tyS~~EmA~~LLgL~saev 641 (866)
T COG4982 603 TGL---MGHNDIIVAAIEKAGV-RTYSTDEMAFNLLGLASAEV 641 (866)
T ss_pred ccc---cCCcchhHHHHHHhCc-eecCHHHHHHHHHhhccHHH
Confidence 431 2222222222222211 35688999999999998643
No 294
>PLN00016 RNA-binding protein; Provisional
Probab=96.26 E-value=0.1 Score=43.17 Aligned_cols=89 Identities=10% Similarity=0.029 Sum_probs=50.9
Q ss_pred CceEEEecccccccCCcc--h------hHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHH
Q 027828 107 GGIIINISATLHYTATWY--Q------IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178 (218)
Q Consensus 107 ~~~iv~iss~~~~~~~~~--~------~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~ 178 (218)
-.++|++||...+..... . ..+. +|...+.+.+ ..++.+..++|+.+..+..... ....+..
T Consensus 157 vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~--------~~~l~~~ilRp~~vyG~~~~~~-~~~~~~~ 226 (378)
T PLN00016 157 LKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ--------KLGVNWTSFRPQYIYGPGNNKD-CEEWFFD 226 (378)
T ss_pred CCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH--------HcCCCeEEEeceeEECCCCCCc-hHHHHHH
Confidence 468999999865432110 0 0111 6777665543 3478999999999987643221 1122222
Q ss_pred hhhhhcC---------CCCCCCHHHHHHHHHHhccC
Q 027828 179 KATDYMA---------AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 179 ~~~~~~~---------~~~~~~~~e~a~~~~~L~s~ 205 (218)
......+ ..-+...+|+|+++..++..
T Consensus 227 ~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~ 262 (378)
T PLN00016 227 RLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGN 262 (378)
T ss_pred HHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcC
Confidence 2222111 11245689999999998864
No 295
>PRK12320 hypothetical protein; Provisional
Probab=95.84 E-value=0.33 Score=43.52 Aligned_cols=133 Identities=8% Similarity=-0.077 Sum_probs=76.6
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRG 100 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ 100 (218)
.+.++.+|+++.. +.+++ .++|+|||.++..... ...+|+.++.++.+++. +.
T Consensus 41 ~ve~v~~Dl~d~~-l~~al-------~~~D~VIHLAa~~~~~------------~~~vNv~Gt~nLleAA~----~~--- 93 (699)
T PRK12320 41 RVDYVCASLRNPV-LQELA-------GEADAVIHLAPVDTSA------------PGGVGITGLAHVANAAA----RA--- 93 (699)
T ss_pred CceEEEccCCCHH-HHHHh-------cCCCEEEEcCccCccc------------hhhHHHHHHHHHHHHHH----Hc---
Confidence 4567889998873 33322 3689999999853211 12478888888888774 33
Q ss_pred CCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHhh
Q 027828 101 QASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSKA 180 (218)
Q Consensus 101 ~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~~ 180 (218)
+.++|++||..+ .+. .|. ..+.+. . .+++.+..+.|+.+..+..... .......+
T Consensus 94 ------GvRiV~~SS~~G---~~~--~~~----~aE~ll----~----~~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~ 148 (699)
T PRK12320 94 ------GARLLFVSQAAG---RPE--LYR----QAETLV----S----TGWAPSLVIRIAPPVGRQLDWM--VCRTVATL 148 (699)
T ss_pred ------CCeEEEEECCCC---CCc--ccc----HHHHHH----H----hcCCCEEEEeCceecCCCCccc--HhHHHHHH
Confidence 347999988642 111 122 122221 1 2357888999999887632211 11122222
Q ss_pred hhhcCCCCC---CCHHHHHHHHHHhccC
Q 027828 181 TDYMAAYKF---GEKWDIAMAALYLASD 205 (218)
Q Consensus 181 ~~~~~~~~~---~~~~e~a~~~~~L~s~ 205 (218)
......++. ...+|++++++.++..
T Consensus 149 l~~~~~~~pI~vIyVdDvv~alv~al~~ 176 (699)
T PRK12320 149 LRSKVSARPIRVLHLDDLVRFLVLALNT 176 (699)
T ss_pred HHHHHcCCceEEEEHHHHHHHHHHHHhC
Confidence 111111222 3789999999888864
No 296
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=95.82 E-value=0.038 Score=42.50 Aligned_cols=75 Identities=9% Similarity=0.014 Sum_probs=49.7
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCC------------HHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRK------------REDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTV 75 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~------------~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~ 75 (218)
...+++.+.+.|.++..+..+... .++..++.+.+.+.++.+|++||+||.....+....+.++|..+
T Consensus 29 G~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~~~~~~~~~~~~~~~ 108 (229)
T PRK06732 29 GKIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDYTPVYMTDLEEVSAS 108 (229)
T ss_pred HHHHHHHHHhCCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCceehhhhhhhhhhhh
Confidence 355667777777666655422110 13445556666666778999999999876666666778888888
Q ss_pred Hhhhhhh
Q 027828 76 IEIDSVG 82 (218)
Q Consensus 76 ~~~n~~~ 82 (218)
+++|-..
T Consensus 109 ~~v~~~~ 115 (229)
T PRK06732 109 DNLNEFL 115 (229)
T ss_pred hhhhhhh
Confidence 7775544
No 297
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=95.67 E-value=0.19 Score=51.28 Aligned_cols=142 Identities=12% Similarity=0.090 Sum_probs=90.3
Q ss_pred HHHHHHHHhcCCCeeEEE--------------------ecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCC
Q 027828 9 RSAVAALHSLGIPAIGLE--------------------GDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLS 68 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~--------------------~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~ 68 (218)
..+++.|.+.|..+..+. ..-.+.+++..++..+.+..+.++++||-.+...... ...+
T Consensus 1769 ~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~-~~~~ 1847 (2582)
T TIGR02813 1769 GVLAEKLIAAGWQVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGFIHLQPQHKSVA-DKVD 1847 (2582)
T ss_pred HHHHHHHHhCCCeEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccccccceEEEecccccccc-cccc
Confidence 457788888888776552 1223567777888888777789999999776432100 0000
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhH--------hHHhHHHHHHHHH
Q 027828 69 PNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH--------VSAAKAAVDSITR 140 (218)
Q Consensus 69 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~--------y~~sK~a~~~~~~ 140 (218)
...+...-...+...|.+.|.+.+.+...+ ++.++.++...|-.++..... -...++++.+|+|
T Consensus 1848 ~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~--------~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~K 1919 (2582)
T TIGR02813 1848 AIELPEAAKQSLMLAFLFAKLLNVKLATNA--------RASFVTVSRIDGGFGYSNGDADSGTQQVKAELNQAALAGLTK 1919 (2582)
T ss_pred ccccchhhHHHHHHHHHHHHhhchhhccCC--------CeEEEEEEecCCccccCCccccccccccccchhhhhHHHHHH
Confidence 001111112334456777777766655433 688999999887666533222 1345789999999
Q ss_pred HHHhhhcCCCCeEEeeeecC
Q 027828 141 SLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 141 ~la~el~~~~gi~v~~v~pG 160 (218)
+++.|+. ...+|...+.|.
T Consensus 1920 tl~~E~P-~~~~r~vDl~~~ 1938 (2582)
T TIGR02813 1920 TLNHEWN-AVFCRALDLAPK 1938 (2582)
T ss_pred hHHHHCC-CCeEEEEeCCCC
Confidence 9999997 666777777664
No 298
>PF12241 Enoyl_reductase: Trans-2-enoyl-CoA reductase catalytic region; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=95.04 E-value=1.1 Score=34.01 Aligned_cols=144 Identities=16% Similarity=0.152 Sum_probs=79.5
Q ss_pred HHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC---C----------CC---------------
Q 027828 13 AALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL---V----------PA--------------- 64 (218)
Q Consensus 13 ~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~---~----------~~--------------- 64 (218)
+..++.|.-...+.+|.-+++--++.++.+++.+|++|.||+..+.+.. . ++
T Consensus 16 ~~A~~~Gl~a~~ingDAFS~e~K~~vI~~Ik~~~G~vDLvVYSLAsp~R~~P~tG~~~~S~LKpig~~~t~~tld~~~~~ 95 (237)
T PF12241_consen 16 KAAEAAGLYAKSINGDAFSDEMKEQVIELIKEDFGKVDLVVYSLASPRRTDPDTGETYRSVLKPIGEPYTGKTLDTETDE 95 (237)
T ss_dssp HHHHHTT--EEEEES-TTSHHHHHHHHHHHHHHTS-EEEEEE----SEEE-TTT--EEE----BSSS-EEEEEEETTTTE
T ss_pred HHHHHCCCeeeecccccCCHHHHHHHHHHHHHhcCCccEEEEeccCCCCCCCCCCCEEeeeeccCCCccccceeecCCCe
Confidence 3445568888999999999999999999999999999999988764321 0 00
Q ss_pred ------CCCCHHHHHHHHhhhhhhHH-HHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCc--chhHhHHhHHHH
Q 027828 65 ------EDLSPNGFRTVIEIDSVGTF-IMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--YQIHVSAAKAAV 135 (218)
Q Consensus 65 ------~~~~~~~~~~~~~~n~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~--~~~~y~~sK~a~ 135 (218)
...+.++++....+.=---+ .+..++ .+.+-- .++.+-|..|=++....+| ..+.-|.+|.-+
T Consensus 96 ~~~~tiepAt~eEi~~TvkVMGGEDWe~Wi~aL----~~AgvL----A~g~kTvAySYIG~~~T~pIY~~GTiG~AK~dL 167 (237)
T PF12241_consen 96 VSEVTIEPATEEEIENTVKVMGGEDWELWIDAL----KEAGVL----AEGFKTVAYSYIGPELTWPIYRDGTIGKAKEDL 167 (237)
T ss_dssp EEEEEE----HHHHHHHHHHHSSHHHHHHHHHH----HHCT-E----EEEEEEEEEEE---GGGCCCCTTCHHHHHHHHH
T ss_pred EEEEeeCCCCHHHHHhhccccCchHHHHHHHHH----HHCCCc----cCCCEEEEEeccCcccChhhhcCCcHHHHHHHH
Confidence 13345666666443332222 222222 222100 0024455566665555555 446779999999
Q ss_pred HHHHHHHHhhhcCCCCeE-EeeeecCcccCCC
Q 027828 136 DSITRSLALEWGTDYAIR-VNGIAPGPIKDTA 166 (218)
Q Consensus 136 ~~~~~~la~el~~~~gi~-v~~v~pG~v~t~~ 166 (218)
+.-+..+..+|+ +.|-+ ..+|+...| |..
T Consensus 168 e~ta~~i~~~L~-~~~G~A~vsV~KAlV-TqA 197 (237)
T PF12241_consen 168 EKTAHAINEKLA-AIGGKAYVSVNKALV-TQA 197 (237)
T ss_dssp HHHHHHHHHHHH-TTT-EEEEEEE------TT
T ss_pred HHHHHHHHHHHH-hcCCcEEEEEehhhh-hhh
Confidence 999999999998 66544 555666655 443
No 299
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=94.26 E-value=0.46 Score=40.32 Aligned_cols=79 Identities=14% Similarity=0.229 Sum_probs=52.7
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
.++..+.+|+++++---+.-+.- .....+|+|||.|+.... .|-++..+.+|.+|+..+.+.+-....-
T Consensus 79 ~Kv~pi~GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~l--- 147 (467)
T KOG1221|consen 79 EKVVPIAGDISEPDLGISESDLR-TLADEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVKL--- 147 (467)
T ss_pred ecceeccccccCcccCCChHHHH-HHHhcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhhh---
Confidence 47888999999754322211111 112379999999996442 1346778899999999999888765443
Q ss_pred CCCCCCCCceEEEecccc
Q 027828 100 GQASSSSGGIIINISATL 117 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~ 117 (218)
..+|.+|..-
T Consensus 148 --------~~~vhVSTAy 157 (467)
T KOG1221|consen 148 --------KALVHVSTAY 157 (467)
T ss_pred --------heEEEeehhh
Confidence 3377777754
No 300
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=93.53 E-value=0.14 Score=42.55 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=36.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
++|+.++++++.+++ .+.++.++++|+.|.+++.++++ ..|+||+++|.
T Consensus 29 a~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVin~~gp 77 (386)
T PF03435_consen 29 ADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDVVINCAGP 77 (386)
T ss_dssp EESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSEEEE-SSG
T ss_pred EECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCEEEECCcc
Confidence 368899998888776 45689999999999999888866 45999999984
No 301
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=92.46 E-value=0.62 Score=36.90 Aligned_cols=137 Identities=14% Similarity=0.010 Sum_probs=87.2
Q ss_pred CccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccccc-------
Q 027828 48 KLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYT------- 120 (218)
Q Consensus 48 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~------- 120 (218)
.+|.++|-|....+..+.--+ -+.+..|+.++++.+..+-.. +.|++..|+..-+.
T Consensus 91 evD~IyhLAapasp~~y~~np----vktIktN~igtln~lglakrv-------------~aR~l~aSTseVYgdp~~hpq 153 (350)
T KOG1429|consen 91 EVDQIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLAKRV-------------GARFLLASTSEVYGDPLVHPQ 153 (350)
T ss_pred HhhhhhhhccCCCCcccccCc----cceeeecchhhHHHHHHHHHh-------------CceEEEeecccccCCcccCCC
Confidence 468888888754432222111 357788999999988877432 46688887765322
Q ss_pred ---------CCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCC--hHHHHHhhhhhcC----
Q 027828 121 ---------ATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLA--PEEIRSKATDYMA---- 185 (218)
Q Consensus 121 ---------~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~---- 185 (218)
+....+.|.-.|.+.+.++....++ .||.|-..++-.+..|....... ...+.......-|
T Consensus 154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~----~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~ 229 (350)
T KOG1429|consen 154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ----EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVY 229 (350)
T ss_pred ccccccccCcCCchhhhhHHHHHHHHHHHHhhcc----cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEE
Confidence 3346788999999999988887664 36888888877777765444331 1222222222222
Q ss_pred -----CCCCCCHHHHHHHHHHhccC
Q 027828 186 -----AYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 186 -----~~~~~~~~e~a~~~~~L~s~ 205 (218)
.+.+....|+.+.++.|+.+
T Consensus 230 g~G~qtRSF~yvsD~Vegll~Lm~s 254 (350)
T KOG1429|consen 230 GDGKQTRSFQYVSDLVEGLLRLMES 254 (350)
T ss_pred cCCcceEEEEeHHHHHHHHHHHhcC
Confidence 22345678899999888853
No 302
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=91.32 E-value=5.2 Score=30.44 Aligned_cols=151 Identities=19% Similarity=0.159 Sum_probs=77.0
Q ss_pred HHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHH
Q 027828 11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEA 90 (218)
Q Consensus 11 ~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 90 (218)
..+++++.| +..+.+|+.|.+++.+++. ++|.++++.+... ....+ ....+.+++
T Consensus 36 ~~~~l~~~g--~~vv~~d~~~~~~l~~al~-------g~d~v~~~~~~~~--------~~~~~--------~~~~li~Aa 90 (233)
T PF05368_consen 36 RAQQLQALG--AEVVEADYDDPESLVAALK-------GVDAVFSVTPPSH--------PSELE--------QQKNLIDAA 90 (233)
T ss_dssp HHHHHHHTT--TEEEES-TT-HHHHHHHHT-------TCSEEEEESSCSC--------CCHHH--------HHHHHHHHH
T ss_pred hhhhhhccc--ceEeecccCCHHHHHHHHc-------CCceEEeecCcch--------hhhhh--------hhhhHHHhh
Confidence 345566655 4567999999998877766 7999999888543 11111 223333444
Q ss_pred HHHHHhcCCCCCCCCCCceEEEecccccccC-----CcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCC
Q 027828 91 LKYLKKGGRGQASSSSGGIIINISATLHYTA-----TWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDT 165 (218)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~-----~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~ 165 (218)
. +.+ -.+|| .||...... .|....| ..|..++.+.+ ..|+....|.||+....
T Consensus 91 ~----~ag--------Vk~~v-~ss~~~~~~~~~~~~p~~~~~-~~k~~ie~~l~--------~~~i~~t~i~~g~f~e~ 148 (233)
T PF05368_consen 91 K----AAG--------VKHFV-PSSFGADYDESSGSEPEIPHF-DQKAEIEEYLR--------ESGIPYTIIRPGFFMEN 148 (233)
T ss_dssp H----HHT---------SEEE-ESEESSGTTTTTTSTTHHHHH-HHHHHHHHHHH--------HCTSEBEEEEE-EEHHH
T ss_pred h----ccc--------cceEE-EEEecccccccccccccchhh-hhhhhhhhhhh--------hccccceeccccchhhh
Confidence 3 333 34576 455443331 1222233 35655554443 33788999999977532
Q ss_pred CccCCCCh-HHHHHh---hhhhcCCC---CCC-CHHHHHHHHHHhccCCCcc
Q 027828 166 AGVSKLAP-EEIRSK---ATDYMAAY---KFG-EKWDIAMAALYLASDAAVH 209 (218)
Q Consensus 166 ~~~~~~~~-~~~~~~---~~~~~~~~---~~~-~~~e~a~~~~~L~s~~~~~ 209 (218)
.. ..... ...... ..-..+.. .+. +.+|+++++..++.+...+
T Consensus 149 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~ 199 (233)
T PF05368_consen 149 LL-PPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH 199 (233)
T ss_dssp HH-TTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT
T ss_pred hh-hhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh
Confidence 21 11100 000000 00001111 233 7799999999998775554
No 303
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=91.14 E-value=4.3 Score=32.42 Aligned_cols=151 Identities=15% Similarity=0.095 Sum_probs=88.7
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
+++.++..|+.|+++|++++. .-+++||-.|.-.+..- .+ .-++|+.++-.+.+.+ ++.+
T Consensus 109 GQvl~~~fd~~DedSIr~vvk-------~sNVVINLIGrd~eTkn--f~------f~Dvn~~~aerlAric----ke~G- 168 (391)
T KOG2865|consen 109 GQVLFMKFDLRDEDSIRAVVK-------HSNVVINLIGRDYETKN--FS------FEDVNVHIAERLARIC----KEAG- 168 (391)
T ss_pred cceeeeccCCCCHHHHHHHHH-------hCcEEEEeeccccccCC--cc------cccccchHHHHHHHHH----HhhC-
Confidence 468889999999999999987 46999999995443221 11 2235666655555544 3443
Q ss_pred CCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCCChHHHHHh
Q 027828 100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRSK 179 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~~ 179 (218)
--++|.+|+..+. ....+-|--+|++-+--++. ++. ....|.|..+..+.-..-.....++..
T Consensus 169 -------VerfIhvS~Lgan--v~s~Sr~LrsK~~gE~aVrd---afP-----eAtIirPa~iyG~eDrfln~ya~~~rk 231 (391)
T KOG2865|consen 169 -------VERFIHVSCLGAN--VKSPSRMLRSKAAGEEAVRD---AFP-----EATIIRPADIYGTEDRFLNYYASFWRK 231 (391)
T ss_pred -------hhheeehhhcccc--ccChHHHHHhhhhhHHHHHh---hCC-----cceeechhhhcccchhHHHHHHHHHHh
Confidence 3569999998754 44455566777766554443 222 345677877764321110011111111
Q ss_pred hhhhcCCCC--------CCCHHHHHHHHHHhccCCCc
Q 027828 180 ATDYMAAYK--------FGEKWDIAMAALYLASDAAV 208 (218)
Q Consensus 180 ~~~~~~~~~--------~~~~~e~a~~~~~L~s~~~~ 208 (218)
...+|+.. +...-|+|++|+-.+.+...
T Consensus 232 -~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s 267 (391)
T KOG2865|consen 232 -FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS 267 (391)
T ss_pred -cCceeeecCCcceeeccEEEehHHHHHHHhccCccc
Confidence 22233322 22346999999988876543
No 304
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=90.20 E-value=0.99 Score=36.03 Aligned_cols=52 Identities=17% Similarity=0.084 Sum_probs=37.5
Q ss_pred CCcH---HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 2 GRRK---TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 2 ~R~~---~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
+|+. ++++++.+++.+.+..+.+..+|+++.+++.+.++ ..|+|||+.....
T Consensus 157 ~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-------~~DilINaTp~Gm 211 (289)
T PRK12548 157 NIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA-------SSDILVNATLVGM 211 (289)
T ss_pred eCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-------cCCEEEEeCCCCC
Confidence 5765 67888888886655556667789888777655443 4699999987543
No 305
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=89.91 E-value=1.4 Score=36.85 Aligned_cols=53 Identities=21% Similarity=0.097 Sum_probs=37.7
Q ss_pred HHHHHHHHHhcCCCeeE-------------EEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCC
Q 027828 8 LRSAVAALHSLGIPAIG-------------LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVP 63 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~-------------~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~ 63 (218)
...+++++...|.++.. ..+|+++.+++.+.+. +.++++|++|+|||+....+
T Consensus 217 G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 217 GYALARAAARRGADVTLVSGPVNLPTPAGVKRIDVESAQEMLDAVL---AALPQADIFIMAAAVADYRP 282 (399)
T ss_pred HHHHHHHHHHCCCEEEEeCCCccccCCCCcEEEccCCHHHHHHHHH---HhcCCCCEEEEccccccccc
Confidence 56677778777766643 3477887777655544 56789999999999765443
No 306
>PLN00106 malate dehydrogenase
Probab=88.16 E-value=3.5 Score=33.56 Aligned_cols=85 Identities=11% Similarity=-0.043 Sum_probs=53.0
Q ss_pred HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccc-----
Q 027828 45 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHY----- 119 (218)
Q Consensus 45 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~----- 119 (218)
.+...|++|+.||..... . ..+...+..|.... +.+.+.+.+.+ ...+|+++|....
T Consensus 83 ~l~~aDiVVitAG~~~~~---g---~~R~dll~~N~~i~----~~i~~~i~~~~--------p~aivivvSNPvD~~~~i 144 (323)
T PLN00106 83 ALKGADLVIIPAGVPRKP---G---MTRDDLFNINAGIV----KTLCEAVAKHC--------PNALVNIISNPVNSTVPI 144 (323)
T ss_pred HcCCCCEEEEeCCCCCCC---C---CCHHHHHHHHHHHH----HHHHHHHHHHC--------CCeEEEEeCCCccccHHH
Confidence 445899999999975431 1 23556666776664 44455555554 2335555554432
Q ss_pred --------cCCcchhHhHHhHHHHHHHHHHHHhhhc
Q 027828 120 --------TATWYQIHVSAAKAAVDSITRSLALEWG 147 (218)
Q Consensus 120 --------~~~~~~~~y~~sK~a~~~~~~~la~el~ 147 (218)
.++|+...|+.++.-...|-..++.++.
T Consensus 145 ~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 145 AAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred HHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence 2456677888887666677777877765
No 307
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=87.05 E-value=6.6 Score=33.00 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=43.1
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHH-HhhhcCCCCeEEee
Q 027828 78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL-ALEWGTDYAIRVNG 156 (218)
Q Consensus 78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~l-a~el~~~~gi~v~~ 156 (218)
+...|..++..++ +..+ -.++|+++++.+.........+.. .....-.+.. ...+. .+|+.-..
T Consensus 176 VD~~g~knlvdA~----~~aG--------vk~~vlv~si~~~~~~~~~~~~~~--~~~~~~~k~~~e~~~~-~Sgl~yti 240 (411)
T KOG1203|consen 176 VDYEGTKNLVDAC----KKAG--------VKRVVLVGSIGGTKFNQPPNILLL--NGLVLKAKLKAEKFLQ-DSGLPYTI 240 (411)
T ss_pred ecHHHHHHHHHHH----HHhC--------CceEEEEEeecCcccCCCchhhhh--hhhhhHHHHhHHHHHH-hcCCCcEE
Confidence 3444666666666 3444 467999999887665544333332 1112222222 23344 77899999
Q ss_pred eecCcccCC
Q 027828 157 IAPGPIKDT 165 (218)
Q Consensus 157 v~pG~v~t~ 165 (218)
|.||....+
T Consensus 241 IR~g~~~~~ 249 (411)
T KOG1203|consen 241 IRPGGLEQD 249 (411)
T ss_pred EeccccccC
Confidence 999988654
No 308
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=85.78 E-value=9.3 Score=29.93 Aligned_cols=84 Identities=11% Similarity=0.056 Sum_probs=55.0
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
..-++++|.+.|.++..+..==-+++.+.+.+..+. .+.|+||.+-|..+ ...+++.+.+-+.+...+.=.-...
T Consensus 23 a~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~---~r~D~vI~tGGLGP--T~DDiT~e~vAka~g~~lv~~~~al 97 (255)
T COG1058 23 AAFLADELTELGVDLARITTVGDNPDRIVEALREAS---ERADVVITTGGLGP--THDDLTAEAVAKALGRPLVLDEEAL 97 (255)
T ss_pred HHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHH---hCCCEEEECCCcCC--CccHhHHHHHHHHhCCCcccCHHHH
Confidence 567889999999877655443335566655555554 46999999999765 3346777777777776665544444
Q ss_pred HHHHHHHHh
Q 027828 88 HEALKYLKK 96 (218)
Q Consensus 88 ~~~~~~~~~ 96 (218)
+.+.....+
T Consensus 98 ~~i~~~~~~ 106 (255)
T COG1058 98 AMIEEKYAK 106 (255)
T ss_pred HHHHHHHHh
Confidence 444444443
No 309
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=85.34 E-value=2.6 Score=35.20 Aligned_cols=81 Identities=15% Similarity=0.039 Sum_probs=48.9
Q ss_pred HHHHHHHHHhcCCCeeEE-------------EecCCCHHHH-HHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCC--HHH
Q 027828 8 LRSAVAALHSLGIPAIGL-------------EGDVRKREDA-VRVVESTINHFGKLDILVNAAAGNFLVPAEDLS--PNG 71 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~-------------~~D~s~~~~~-~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~--~~~ 71 (218)
...+++++...|.++..+ .+|+++.+++ +.++++ .++.+|++|+|||+....+..... ...
T Consensus 214 g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~ 290 (390)
T TIGR00521 214 GLALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLEAALNE---LAKDFDIFISAAAVADFKPKTVFEGKIKK 290 (390)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHHHHHHh---hcccCCEEEEccccccccccccccccccc
Confidence 456777887777665543 4778888777 445433 346899999999987655432211 111
Q ss_pred HHHHHhhhhhhHHHHHHHHH
Q 027828 72 FRTVIEIDSVGTFIMCHEAL 91 (218)
Q Consensus 72 ~~~~~~~n~~~~~~l~~~~~ 91 (218)
....+.+++...--+.+.+.
T Consensus 291 ~~~~~~l~L~~~pdil~~l~ 310 (390)
T TIGR00521 291 QGEELSLKLVKNPDIIAEVR 310 (390)
T ss_pred cCCceeEEEEeCcHHHHHHH
Confidence 11234566666655555544
No 310
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=84.66 E-value=2 Score=35.73 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=39.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
++|+.++..++.+.. +.++.++++|+.+.+.+.+++++ .|++|+.++..
T Consensus 31 AdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~~-------~d~VIn~~p~~ 79 (389)
T COG1748 31 ADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIKD-------FDLVINAAPPF 79 (389)
T ss_pred EeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHhc-------CCEEEEeCCch
Confidence 368888887776655 34899999999999999888873 49999988843
No 311
>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=84.38 E-value=13 Score=27.59 Aligned_cols=64 Identities=13% Similarity=0.108 Sum_probs=40.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 77 (218)
+-|...++.+.+..+..+..+..+++|+.+ .++. +++|+++.|.++... +..+...+.+...+.
T Consensus 75 DiNp~A~~~Tl~TA~~n~~~~~~V~tdl~~---------~l~~--~~VDvLvfNPPYVpt-~~~~i~~~~i~~a~a 138 (209)
T KOG3191|consen 75 DINPEALEATLETARCNRVHIDVVRTDLLS---------GLRN--ESVDVLVFNPPYVPT-SDEEIGDEGIASAWA 138 (209)
T ss_pred cCCHHHHHHHHHHHHhcCCccceeehhHHh---------hhcc--CCccEEEECCCcCcC-CcccchhHHHHHHHh
Confidence 346667777777776666677778777642 2222 589999999997653 334444555555554
No 312
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=83.42 E-value=7.8 Score=32.91 Aligned_cols=99 Identities=18% Similarity=0.138 Sum_probs=52.7
Q ss_pred CCcHHHHHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHH---HHh
Q 027828 2 GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRT---VIE 77 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~---~~~ 77 (218)
+.+.++++.+.+.+...|. ++.++..|..+....... ..+.+|.|+.++.....+.+...+...|.. .+.
T Consensus 284 D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~------~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~ 357 (434)
T PRK14901 284 DRSASRLKKLQENAQRLGLKSIKILAADSRNLLELKPQ------WRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQ 357 (434)
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEEEeCChhhccccccc------ccccCCEEEEeCCCCcccccccCcchhhhCCHHHHH
Confidence 4577788888888877765 467777887654211000 113689999877543322222222211211 111
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 027828 78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116 (218)
Q Consensus 78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~ 116 (218)
.-..-...++..+.+.++. +|++|+.+++
T Consensus 358 ~l~~~Q~~iL~~a~~~lkp----------gG~lvystcs 386 (434)
T PRK14901 358 ELAPLQAELLESLAPLLKP----------GGTLVYATCT 386 (434)
T ss_pred HHHHHHHHHHHHHHHhcCC----------CCEEEEEeCC
Confidence 1111234555555555544 6889987765
No 313
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=82.71 E-value=0.69 Score=35.89 Aligned_cols=166 Identities=16% Similarity=0.079 Sum_probs=94.9
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
|+.....-+|++|...+.++++.+ +++-++|-|+....+-..++ -+..-++...|++.++.++-..-+..
T Consensus 82 ~~~mkLHYgDmTDss~L~k~I~~i-----kPtEiYnLaAQSHVkvSFdl----peYTAeVdavGtLRlLdAi~~c~l~~- 151 (376)
T KOG1372|consen 82 GASMKLHYGDMTDSSCLIKLISTI-----KPTEVYNLAAQSHVKVSFDL----PEYTAEVDAVGTLRLLDAIRACRLTE- 151 (376)
T ss_pred cceeEEeeccccchHHHHHHHhcc-----CchhhhhhhhhcceEEEeec----ccceeeccchhhhhHHHHHHhcCccc-
Confidence 456677889999999999999987 67888888876554321222 13344577788888888876543332
Q ss_pred CCCCCCCCCceEEEeccccc-----------ccCCcchhHhHHhHHHHHHHHHHHHhh---hcCCCCeEEeeeecCcccC
Q 027828 99 RGQASSSSGGIIINISATLH-----------YTATWYQIHVSAAKAAVDSITRSLALE---WGTDYAIRVNGIAPGPIKD 164 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~-----------~~~~~~~~~y~~sK~a~~~~~~~la~e---l~~~~gi~v~~v~pG~v~t 164 (218)
.-++---|+..- ..++-+.+.|+++|.+...++-..+.. ++ ..||-+|.=+|.-=++
T Consensus 152 --------~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfA-cNGILFNHESPRRGen 222 (376)
T KOG1372|consen 152 --------KVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFA-CNGILFNHESPRRGEN 222 (376)
T ss_pred --------ceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhccee-eccEeecCCCCccccc
Confidence 233433333221 124446788999998754444333332 34 5678888877753322
Q ss_pred CCccCCCChHHHHH---------hhhhhcCCCCCCCHHHHHHHHHHhccC
Q 027828 165 TAGVSKLAPEEIRS---------KATDYMAAYKFGEKWDIAMAALYLASD 205 (218)
Q Consensus 165 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~e~a~~~~~L~s~ 205 (218)
-...+- ...... .+.+....+-++-..|-+++++.++..
T Consensus 223 FVTRKI--tRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~ 270 (376)
T KOG1372|consen 223 FVTRKI--TRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLMLQQ 270 (376)
T ss_pred hhhHHH--HHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHHHhc
Confidence 111100 000000 011112233466777888888877753
No 314
>PRK14968 putative methyltransferase; Provisional
Probab=80.99 E-value=9.3 Score=27.81 Aligned_cols=48 Identities=10% Similarity=-0.013 Sum_probs=29.4
Q ss_pred CCcHHHHHHHHHHHHhcCCC---eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGIP---AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~---~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
.++++.++.+.+.+...+.+ +.++.+|+.+. +.+ +.+|.++.|.....
T Consensus 52 D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~--~~~d~vi~n~p~~~ 102 (188)
T PRK14968 52 DINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG--DKFDVILFNPPYLP 102 (188)
T ss_pred ECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc--cCceEEEECCCcCC
Confidence 34556666666666554432 77778886542 111 26899999887654
No 315
>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional
Probab=80.06 E-value=30 Score=29.10 Aligned_cols=53 Identities=17% Similarity=0.111 Sum_probs=33.0
Q ss_pred CCcHHHHHHHHHHHHhcCC---CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~---~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
..+...++.+.+-+...+. ++.++.+|+.+ +........+++|.||.+.....
T Consensus 250 D~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~------~l~~~~~~~~~fDlVilDPP~f~ 305 (396)
T PRK15128 250 DTSQEALDIARQNVELNKLDLSKAEFVRDDVFK------LLRTYRDRGEKFDVIVMDPPKFV 305 (396)
T ss_pred ECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHH------HHHHHHhcCCCCCEEEECCCCCC
Confidence 3566667776666665543 57788888742 22223223347999999987543
No 316
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=77.89 E-value=32 Score=27.03 Aligned_cols=92 Identities=17% Similarity=0.117 Sum_probs=51.2
Q ss_pred CCcHHHHHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCC-------CCHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED-------LSPNGFR 73 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~-------~~~~~~~ 73 (218)
..+..+++.+.+.++..|. ++.++..|..+.. ...+.+|.|+.++.....+.+.. .+.+++.
T Consensus 103 D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~----------~~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~ 172 (264)
T TIGR00446 103 EFSKSRTKVLIANINRCGVLNVAVTNFDGRVFG----------AAVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQ 172 (264)
T ss_pred cCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhh----------hhccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHH
Confidence 4567778888887777664 4566667653221 11246999998876543322221 2222222
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 027828 74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
. -..-...+++.+.+.++. +|++|+.++..
T Consensus 173 ~----l~~~q~~iL~~a~~~lkp----------gG~lvYstcs~ 202 (264)
T TIGR00446 173 E----ISALQKELIDSAFDALKP----------GGVLVYSTCSL 202 (264)
T ss_pred H----HHHHHHHHHHHHHHhcCC----------CCEEEEEeCCC
Confidence 1 122234466666665554 68888876653
No 317
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A.
Probab=77.17 E-value=9.4 Score=24.75 Aligned_cols=60 Identities=20% Similarity=0.227 Sum_probs=38.7
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~ 76 (218)
+.+++.++.+.+...+.+.++.+++.|+.+.. ...++.|+++++.... ..++.+++...+
T Consensus 31 D~s~~~l~~~~~~~~~~~~~~~~~~~D~~~l~----------~~~~~~D~v~~~~~~~-----~~~~~~~~~~ll 90 (101)
T PF13649_consen 31 DISPEMLELAKKRFSEDGPKVRFVQADARDLP----------FSDGKFDLVVCSGLSL-----HHLSPEELEALL 90 (101)
T ss_dssp ES-HHHHHHHHHHSHHTTTTSEEEESCTTCHH----------HHSSSEEEEEE-TTGG-----GGSSHHHHHHHH
T ss_pred ECCHHHHHHHHHhchhcCCceEEEECCHhHCc----------ccCCCeeEEEEcCCcc-----CCCCHHHHHHHH
Confidence 34667777777777766778999999997742 2335899999955522 234555555443
No 318
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=74.97 E-value=14 Score=27.27 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=35.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
++|+.++++++.+++.+.. ......+|..+.+++.+.+. ..|+||+......
T Consensus 58 ~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-------~~diVi~at~~g~ 109 (194)
T cd01078 58 VGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK-------GADVVFAAGAAGV 109 (194)
T ss_pred EcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh-------cCCEEEECCCCCc
Confidence 3688888888888876431 23455678888887766654 5788888766433
No 319
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=74.63 E-value=6.4 Score=32.07 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=33.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
.+||..+++.+..+| |.+...+.+.+ +..++.+.+ ..++|+|++|-
T Consensus 36 AgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~~VVlncvGP 81 (382)
T COG3268 36 AGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RTQVVLNCVGP 81 (382)
T ss_pred ccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cceEEEecccc
Confidence 489999999999888 55565555555 555555444 68999999993
No 320
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=73.94 E-value=8.8 Score=26.68 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=36.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCee-EEEecCCCHHHHHHHHHHHHH
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAI-GLEGDVRKREDAVRVVESTIN 44 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~-~~~~D~s~~~~~~~~~~~~~~ 44 (218)
++||-++-++..++|++.|-++. +-.|++.+..++...++.+.+
T Consensus 90 i~kNveRD~r~~~~L~~~GwrvlvVWEC~~r~kas~a~~l~rl~~ 134 (150)
T COG3727 90 IGKNVERDERDIKRLQQLGWRVLVVWECALRKKASDAARLERLEE 134 (150)
T ss_pred HhhhhhhhHHHHHHHHHcCCeEEEEEeeechHHHhHHHHHHHHHH
Confidence 46888888999999999998875 457999998888888887766
No 321
>PF06962 rRNA_methylase: Putative rRNA methylase; InterPro: IPR010719 This family contains a number of putative rRNA methylases.; PDB: 3EEY_H 3LBY_A 3MTI_A.
Probab=73.94 E-value=2.1 Score=30.16 Aligned_cols=104 Identities=18% Similarity=0.131 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHhcCC--CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 5 KTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~--~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
++.++.+.+.+.+.+. ++..+... -+.+...+.. +++|.++.|-|..+.++ +.+.+...+
T Consensus 9 ~~Ai~~T~~rL~~~~~~~~v~li~~s---He~l~~~i~~-----~~v~~~iFNLGYLPggD----------k~i~T~~~T 70 (140)
T PF06962_consen 9 EEAIENTRERLEEAGLEDRVTLILDS---HENLDEYIPE-----GPVDAAIFNLGYLPGGD----------KSITTKPET 70 (140)
T ss_dssp HHHHHHHHHHHHHTT-GSGEEEEES----GGGGGGT--S-------EEEEEEEESB-CTS-----------TTSB--HHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEECC---HHHHHhhCcc-----CCcCEEEEECCcCCCCC----------CCCCcCcHH
Confidence 5667888888888753 45544332 2333333332 58999999999876432 234455667
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHH
Q 027828 83 TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLA 143 (218)
Q Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la 143 (218)
++...+.++..+.. +|.|+.+.=. +.++ =..=+-|+..|++.|.
T Consensus 71 Tl~Al~~al~lL~~----------gG~i~iv~Y~----GH~g---G~eE~~av~~~~~~L~ 114 (140)
T PF06962_consen 71 TLKALEAALELLKP----------GGIITIVVYP----GHPG---GKEESEAVEEFLASLD 114 (140)
T ss_dssp HHHHHHHHHHHEEE----------EEEEEEEE------STCH---HHHHHHHHHHHHHTS-
T ss_pred HHHHHHHHHHhhcc----------CCEEEEEEeC----CCCC---CHHHHHHHHHHHHhCC
Confidence 88888888888777 4556555332 2221 1223456777777764
No 322
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=72.13 E-value=9.3 Score=28.38 Aligned_cols=55 Identities=18% Similarity=0.111 Sum_probs=37.7
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCC--H--------HHHHHHHHHHHHHhCCccEEEeCCCCCCCC
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRK--R--------EDAVRVVESTINHFGKLDILVNAAAGNFLV 62 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~--~--------~~~~~~~~~~~~~~~~ld~li~~ag~~~~~ 62 (218)
...+++++...|.+++.+.+..+- + ++..++.+.+.+.+..-|++|++|++....
T Consensus 32 G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 32 GAALAEEAARRGAEVTLIHGPSSLPPPPGVKVIRVESAEEMLEAVKELLPSADIIIMAAAVSDFR 96 (185)
T ss_dssp HHHHHHHHHHTT-EEEEEE-TTS----TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred HHHHHHHHHHCCCEEEEEecCccccccccceEEEecchhhhhhhhccccCcceeEEEecchhhee
Confidence 456788888889888888877542 2 567788888888777779999999976543
No 323
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=70.57 E-value=46 Score=28.24 Aligned_cols=51 Identities=20% Similarity=0.153 Sum_probs=34.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
+.+++.++.+.+.+...|.++.++..|..+.... . ..+.+|.|+.++....
T Consensus 275 D~s~~~l~~~~~n~~~~g~~~~~~~~D~~~~~~~---~-----~~~~fD~Vl~D~Pcs~ 325 (427)
T PRK10901 275 DIDAQRLERVRENLQRLGLKATVIVGDARDPAQW---W-----DGQPFDRILLDAPCSA 325 (427)
T ss_pred eCCHHHHHHHHHHHHHcCCCeEEEEcCcccchhh---c-----ccCCCCEEEECCCCCc
Confidence 3566777777777777676777888888764321 1 1246999998886543
No 324
>cd00466 DHQase_II Dehydroquinase (DHQase), type II. Dehydroquinase (or 3-dehydroquinate dehydratase) catalyzes the reversible dehydration of 3-dehydroquinate to form 3-dehydroshikimate. This reaction is part of two metabolic pathways: the biosynthetic shikimate pathway and the catabolic quinate pathway. There are two types of DHQases, which are distinct from each other in amino acid sequence and three-dimensional structure. Type I enzymes usually catalyze the biosynthetic reaction using a syn elimination mechanism. In contrast, type II enzymes, found in the quinate pathway of fungi and in the shikimate pathway of many bacteria, are dodecameric enzymes that employ an anti elimination reaction mechanism.
Probab=69.94 E-value=25 Score=24.83 Aligned_cols=36 Identities=11% Similarity=0.103 Sum_probs=25.2
Q ss_pred cCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 18 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 18 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
.|.++.+++.+- | .++++++.+..++.|++|.|+|.
T Consensus 40 ~g~~v~~~QSN~---E--gelid~I~~a~~~~dgiIINpga 75 (140)
T cd00466 40 LGVEVEFFQSNH---E--GELIDWIHEARDGADGIIINPGA 75 (140)
T ss_pred cCCEEEEEeeCc---H--HHHHHHHHHhhccCcEEEEcchH
Confidence 366677776553 2 34667776666689999999984
No 325
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=68.50 E-value=74 Score=27.09 Aligned_cols=96 Identities=20% Similarity=0.217 Sum_probs=52.1
Q ss_pred CCcHHHHHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 2 GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
+.+..+++.+.+.+...|. ++.++..|..+... .. .+.+|.|+..+.....+.+.. .++.....-..++
T Consensus 269 Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l~~---~~------~~~fD~Vl~DaPCsg~G~~~~-~p~~~~~~~~~~~ 338 (431)
T PRK14903 269 DISREKIQLVEKHAKRLKLSSIEIKIADAERLTE---YV------QDTFDRILVDAPCTSLGTARN-HPEVLRRVNKEDF 338 (431)
T ss_pred ECCHHHHHHHHHHHHHcCCCeEEEEECchhhhhh---hh------hccCCEEEECCCCCCCccccC-ChHHHHhCCHHHH
Confidence 4567788888888877765 35677777664321 11 136899998877654333222 1221111111122
Q ss_pred hh----HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 027828 81 VG----TFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 81 ~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
.. ...++..+...++. +|.+|+.+++.
T Consensus 339 ~~l~~~Q~~iL~~a~~~Lkp----------GG~LvYsTCs~ 369 (431)
T PRK14903 339 KKLSEIQLRIVSQAWKLLEK----------GGILLYSTCTV 369 (431)
T ss_pred HHHHHHHHHHHHHHHHhcCC----------CCEEEEEECCC
Confidence 22 23444455544443 58888877764
No 326
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=66.97 E-value=27 Score=24.84 Aligned_cols=36 Identities=11% Similarity=0.120 Sum_probs=25.5
Q ss_pred cCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 18 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 18 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
.|.++.+++.+- | -.+++++.+..++.|++|.|+|.
T Consensus 42 ~g~~v~~~QSN~---E--GelId~I~~a~~~~dgiiINpga 77 (146)
T PRK05395 42 LGVELEFFQSNH---E--GELIDRIHEARDGADGIIINPGA 77 (146)
T ss_pred cCCEEEEEeeCc---H--HHHHHHHHhcccCCcEEEECchH
Confidence 366666666543 3 45777777766789999999984
No 327
>TIGR01884 cas_HTH CRISPR locus-related DNA-binding protein. Most but not all examples of this family are associated with CRISPR loci, a combination of DNA repeats and characteristic proteins encoded near the repeat cluster. The C-terminal region of this protein is homologous to DNA-binding helix-turn-helix domains with predicted transcriptional regulatory activity.
Probab=66.84 E-value=28 Score=26.07 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=30.1
Q ss_pred HHHHHHHHHhc---CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 8 LRSAVAALHSL---GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 8 l~~~~~~l~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
.+.+.+.+... +.++..+.+|+.|...+-.-+.++......-+++||-+|.+
T Consensus 44 ~~~l~~~~~~~~~~~~~~~~~~vd~~d~~~~~~~v~~~i~~~~~~~v~vnlsgG~ 98 (203)
T TIGR01884 44 VESLRAIISDLGGNLVEGTIKEIELKDVPSILRQMSDIIKEEREPRVIINLSGGM 98 (203)
T ss_pred HHHHHHHHHHhccCCCcceEEEEecCCHHHHHHHHHHHHHhcccCcEEEEcCCCc
Confidence 34444444443 45888999999997553333333333333345777777753
No 328
>PRK13015 3-dehydroquinate dehydratase; Reviewed
Probab=66.18 E-value=31 Score=24.52 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=24.7
Q ss_pred cCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 18 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 18 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
.|.++.+++.+- | -.+++++.+..++.|++|.|+|.
T Consensus 42 ~g~~~~~~QSN~---E--GelId~i~~a~~~~dgiIINpga 77 (146)
T PRK13015 42 LGLEVEFRQSNH---E--GELIDWIHEARGDVAGIVINPGA 77 (146)
T ss_pred cCCEEEEEeeCc---H--HHHHHHHHHhhhcCCEEEEcchH
Confidence 366677776553 3 34666666666678999999984
No 329
>COG4123 Predicted O-methyltransferase [General function prediction only]
Probab=65.76 E-value=26 Score=27.35 Aligned_cols=90 Identities=13% Similarity=0.051 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC-C-CCCHHHHHHHHhhhhh
Q 027828 6 TVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-E-DLSPNGFRTVIEIDSV 81 (218)
Q Consensus 6 ~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~-~-~~~~~~~~~~~~~n~~ 81 (218)
+..+.+.+-+... ..++.+++.|+.+...... +.++|.||+|..+.....- . +-..+.-+.....++.
T Consensus 79 ~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~~--------~~~fD~Ii~NPPyf~~~~~~~~~~~~~~Ar~e~~~~le 150 (248)
T COG4123 79 EAAEMAQRNVALNPLEERIQVIEADIKEFLKALV--------FASFDLIICNPPYFKQGSRLNENPLRAIARHEITLDLE 150 (248)
T ss_pred HHHHHHHHHHHhCcchhceeEehhhHHHhhhccc--------ccccCEEEeCCCCCCCccccCcChhhhhhhhhhcCCHH
Confidence 3334444444333 2477788777654332211 1269999999997765332 1 1111222334444555
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccc
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISAT 116 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~ 116 (218)
..+..+..+ .+. +|++.+|...
T Consensus 151 ~~i~~a~~~----lk~---------~G~l~~V~r~ 172 (248)
T COG4123 151 DLIRAAAKL----LKP---------GGRLAFVHRP 172 (248)
T ss_pred HHHHHHHHH----ccC---------CCEEEEEecH
Confidence 555444443 333 6889988664
No 330
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=65.76 E-value=50 Score=24.09 Aligned_cols=84 Identities=10% Similarity=0.048 Sum_probs=55.4
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
..-+.+.+.+.|.++..+..=-.+.+.+.+.+..+.+ ..|+||.+-|... ...+.+.+.+.+.+...+...-.+.
T Consensus 21 ~~~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~~~~---~~dlVIttGG~G~--t~~D~t~ea~~~~~~~~l~~~~e~~ 95 (170)
T cd00885 21 AAFLAKELAELGIEVYRVTVVGDDEDRIAEALRRASE---RADLVITTGGLGP--THDDLTREAVAKAFGRPLVLDEEAL 95 (170)
T ss_pred HHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHh---CCCEEEECCCCCC--CCCChHHHHHHHHhCCCcccCHHHH
Confidence 3456677777788776655444556666666666543 6899999866543 2356788888888887777766665
Q ss_pred HHHHHHHHh
Q 027828 88 HEALKYLKK 96 (218)
Q Consensus 88 ~~~~~~~~~ 96 (218)
+.+..++.+
T Consensus 96 ~~i~~~~~~ 104 (170)
T cd00885 96 ERIEARFAR 104 (170)
T ss_pred HHHHHHHHh
Confidence 555544443
No 331
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=65.48 E-value=65 Score=27.49 Aligned_cols=49 Identities=18% Similarity=0.147 Sum_probs=30.5
Q ss_pred CCcHHHHHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
+.+.+.++.+.+.+...|. ++.++..|..+... .+. +.+|.|+.++...
T Consensus 282 Di~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~------~~~---~~fD~Vl~D~Pcs 331 (444)
T PRK14902 282 DIHEHKLKLIEENAKRLGLTNIETKALDARKVHE------KFA---EKFDKILVDAPCS 331 (444)
T ss_pred eCCHHHHHHHHHHHHHcCCCeEEEEeCCcccccc------hhc---ccCCEEEEcCCCC
Confidence 3456667777776666653 46777888765321 010 4789999887644
No 332
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=65.40 E-value=37 Score=25.29 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=57.0
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----CCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 24 GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 24 ~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
-...|.++.++.. +.+..+|+++++-|.... ..+...+.+ . .+.+.+++ ++.+
T Consensus 66 q~~vDf~Kl~~~a-------~~~qg~dV~FcaLgTTRgkaGadgfykvDhD---y--------vl~~A~~A----Ke~G- 122 (238)
T KOG4039|consen 66 QVEVDFSKLSQLA-------TNEQGPDVLFCALGTTRGKAGADGFYKVDHD---Y--------VLQLAQAA----KEKG- 122 (238)
T ss_pred eEEechHHHHHHH-------hhhcCCceEEEeecccccccccCceEeechH---H--------HHHHHHHH----HhCC-
Confidence 3445555544432 333489999999996543 222222222 1 12222222 3333
Q ss_pred CCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccC
Q 027828 100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVS 169 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~ 169 (218)
-..|+.+||.++.... ...|--.|.-++.=+..| .+ =++..++||++.......
T Consensus 123 -------ck~fvLvSS~GAd~sS--rFlY~k~KGEvE~~v~eL--~F-----~~~~i~RPG~ll~~R~es 176 (238)
T KOG4039|consen 123 -------CKTFVLVSSAGADPSS--RFLYMKMKGEVERDVIEL--DF-----KHIIILRPGPLLGERTES 176 (238)
T ss_pred -------CeEEEEEeccCCCccc--ceeeeeccchhhhhhhhc--cc-----cEEEEecCcceecccccc
Confidence 4679999998765432 223544555444332222 11 278889999997655443
No 333
>PF01220 DHquinase_II: Dehydroquinase class II; InterPro: IPR001874 3-dehydroquinate dehydratase (4.2.1.10 from EC), or dehydroquinase, catalyzes the conversion of 3-dehydroquinate into 3-dehydroshikimate. It is the third step in the shikimate pathway for the biosynthesis of aromatic amino acids from chorismate. Two classes of dehydroquinases exist, known as types I and II. Class-II enzymes are homododecameric enzymes of about 17 kDa. They are found in some bacteria such as actinomycetales [, ] and some fungi where they act in a catabolic pathway that allows the use of quinic acid as a carbon source.; GO: 0003855 3-dehydroquinate dehydratase activity; PDB: 3N8K_J 3N7A_I 3N87_F 3N8N_H 3N86_N 1H0S_A 3N59_J 1H05_A 1H0R_A 2Y71_A ....
Probab=65.05 E-value=23 Score=25.04 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=25.7
Q ss_pred hcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 17 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 17 ~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
+.|.++.+++.|- | ..+++++.+..+..|++|.|+|..
T Consensus 40 ~~g~~v~~~QSN~---E--Gelid~I~~a~~~~dgiIINpga~ 77 (140)
T PF01220_consen 40 ELGVEVEFFQSNH---E--GELIDWIHEARDDVDGIIINPGAY 77 (140)
T ss_dssp HTTEEEEEEE-SS---H--HHHHHHHHHHTCTTSEEEEE-GGG
T ss_pred HCCCeEEEEecCC---H--HHHHHHHHHHHhhCCEEEEccchh
Confidence 3466666676553 3 457888888777899999999954
No 334
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=64.96 E-value=58 Score=24.56 Aligned_cols=35 Identities=20% Similarity=0.155 Sum_probs=24.7
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
++.++++|+.+.+.+..+.+... .+.+|+|+.+..
T Consensus 92 ~v~~i~~D~~~~~~~~~i~~~~~--~~~~D~V~S~~~ 126 (209)
T PRK11188 92 GVDFLQGDFRDELVLKALLERVG--DSKVQVVMSDMA 126 (209)
T ss_pred CcEEEecCCCChHHHHHHHHHhC--CCCCCEEecCCC
Confidence 36677888888776666655442 258999999875
No 335
>TIGR01088 aroQ 3-dehydroquinate dehydratase, type II. This model specifies the type II enzyme. The type I enzyme, often found as part of a multifunctional protein, is described by TIGR01093.
Probab=64.91 E-value=32 Score=24.31 Aligned_cols=36 Identities=11% Similarity=0.173 Sum_probs=25.1
Q ss_pred cCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 18 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 18 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
.|.++.+++.+- | -.+++++.+..+..|++|.|+|.
T Consensus 40 ~g~~v~~~QSN~---E--GelId~i~~a~~~~dgiIINpga 75 (141)
T TIGR01088 40 LNVELEFFQSNS---E--GQLIDKIHEAEGQYDGIIINPGA 75 (141)
T ss_pred cCCEEEEEeeCc---H--HHHHHHHHhccccCCEEEEcChH
Confidence 366666666543 3 45677777766779999999984
No 336
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=64.61 E-value=50 Score=28.18 Aligned_cols=91 Identities=20% Similarity=0.189 Sum_probs=49.7
Q ss_pred CCcHHHHHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCC-------CCCCHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPA-------EDLSPNGFR 73 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~-------~~~~~~~~~ 73 (218)
+.+.+.++.+.+.++..|. ++.++..|..+.. ..+.+|.|+..+.....+-+ +..+.++++
T Consensus 282 D~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~~-----------~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~ 350 (445)
T PRK14904 282 DRYPQKLEKIRSHASALGITIIETIEGDARSFS-----------PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLA 350 (445)
T ss_pred ECCHHHHHHHHHHHHHhCCCeEEEEeCcccccc-----------cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHH
Confidence 3466777777777776664 4567777765431 11368999876543222111 222333333
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 027828 74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
+. ..-...+.+.+...++. +|++|+.+++.
T Consensus 351 ~l----~~~q~~iL~~a~~~lkp----------gG~lvystcs~ 380 (445)
T PRK14904 351 EL----VGLQAELLDHAASLLKP----------GGVLVYATCSI 380 (445)
T ss_pred HH----HHHHHHHHHHHHHhcCC----------CcEEEEEeCCC
Confidence 22 22344455666655554 68888877654
No 337
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=64.22 E-value=9.5 Score=28.54 Aligned_cols=137 Identities=12% Similarity=-0.064 Sum_probs=67.2
Q ss_pred CcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhh
Q 027828 3 RRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
-+-+.++.+++.+... +.++..+-+|=.+.-.++.+.+. .+...+....-...+.-.+...-..-...++.+
T Consensus 9 G~GSNlqaiida~~~~~~~a~i~~Visd~~~A~~lerA~~~------gIpt~~~~~k~~~~r~~~d~~l~~~l~~~~~dl 82 (200)
T COG0299 9 GNGSNLQAIIDAIKGGKLDAEIVAVISDKADAYALERAAKA------GIPTVVLDRKEFPSREAFDRALVEALDEYGPDL 82 (200)
T ss_pred CCcccHHHHHHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHc------CCCEEEeccccCCCHHHHHHHHHHHHHhcCCCE
Confidence 3456677888877643 23566666776666655554332 444433333211111001111111122233344
Q ss_pred hhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
.-..-+++.+-|.+...= .|||+||=... .|.+.. +...-+.+..-.. .+|++|.-|..|
T Consensus 83 vvLAGyMrIL~~~fl~~~--------~grIlNIHPSL----LP~f~G-------~h~~~~A~~aG~k-~sG~TVH~V~e~ 142 (200)
T COG0299 83 VVLAGYMRILGPEFLSRF--------EGRILNIHPSL----LPAFPG-------LHAHEQALEAGVK-VSGCTVHFVTEG 142 (200)
T ss_pred EEEcchHHHcCHHHHHHh--------hcceEecCccc----ccCCCC-------chHHHHHHHcCCC-ccCcEEEEEccC
Confidence 434444555556555543 57899984432 222221 3344444444444 678999988877
Q ss_pred cccCC
Q 027828 161 PIKDT 165 (218)
Q Consensus 161 ~v~t~ 165 (218)
+=..|
T Consensus 143 vD~Gp 147 (200)
T COG0299 143 VDTGP 147 (200)
T ss_pred CCCCC
Confidence 44333
No 338
>PTZ00325 malate dehydrogenase; Provisional
Probab=64.18 E-value=78 Score=25.80 Aligned_cols=82 Identities=7% Similarity=-0.064 Sum_probs=47.6
Q ss_pred HhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc------
Q 027828 45 HFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH------ 118 (218)
Q Consensus 45 ~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~------ 118 (218)
.+...|+||+.+|..... .+.+...+..|+...-.+ .+.|.+.+ ..++|+++|...
T Consensus 73 ~l~gaDvVVitaG~~~~~------~~tR~dll~~N~~i~~~i----~~~i~~~~--------~~~iviv~SNPvdv~~~~ 134 (321)
T PTZ00325 73 ALRGADLVLICAGVPRKP------GMTRDDLFNTNAPIVRDL----VAAVASSA--------PKAIVGIVSNPVNSTVPI 134 (321)
T ss_pred HhCCCCEEEECCCCCCCC------CCCHHHHHHHHHHHHHHH----HHHHHHHC--------CCeEEEEecCcHHHHHHH
Confidence 334789999999975321 123556677776655544 44555555 355777777552
Q ss_pred -------ccCCcchhHhHHhHHHHH--HHHHHHHhhh
Q 027828 119 -------YTATWYQIHVSAAKAAVD--SITRSLALEW 146 (218)
Q Consensus 119 -------~~~~~~~~~y~~sK~a~~--~~~~~la~el 146 (218)
..++|....||.+ .++ .|-..++..+
T Consensus 135 ~~~~~~~~sg~p~~~viG~g--~LDs~R~r~~la~~l 169 (321)
T PTZ00325 135 AAETLKKAGVYDPRKLFGVT--TLDVVRARKFVAEAL 169 (321)
T ss_pred HHhhhhhccCCChhheeech--hHHHHHHHHHHHHHh
Confidence 1235566677776 243 3444455544
No 339
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=63.21 E-value=49 Score=24.10 Aligned_cols=17 Identities=12% Similarity=0.051 Sum_probs=9.7
Q ss_pred hHhHHhHHHHHHHHHHH
Q 027828 126 IHVSAAKAAVDSITRSL 142 (218)
Q Consensus 126 ~~y~~sK~a~~~~~~~l 142 (218)
..--+-|.+++-+.|.+
T Consensus 147 aP~w~~~~glEWlyRl~ 163 (172)
T PF03808_consen 147 APKWMRRLGLEWLYRLL 163 (172)
T ss_pred cCHHHHHcCcHHHHHHH
Confidence 33455566666666654
No 340
>PRK01215 competence damage-inducible protein A; Provisional
Probab=63.15 E-value=74 Score=25.14 Aligned_cols=83 Identities=14% Similarity=0.136 Sum_probs=53.0
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
..-+.+.+.+.|.++..+..--.|.+.+.+.++.+.+ +.|+||.+-|... ...+.+.+.+.+.+...+...-.+.
T Consensus 25 ~~~l~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~a~~---~~DlVIttGG~g~--t~dD~t~eaia~~~g~~l~~~~e~~ 99 (264)
T PRK01215 25 ASWIARRLTYLGYTVRRITVVMDDIEEIVSAFREAID---RADVVVSTGGLGP--TYDDKTNEGFAKALGVELELNEDAL 99 (264)
T ss_pred HHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHHhc---CCCEEEEeCCCcC--ChhhhHHHHHHHHhCCCCCCCHHHH
Confidence 3456677778888776555445567777777776654 4699999866543 2346677777777776666655555
Q ss_pred HHHHHHHH
Q 027828 88 HEALKYLK 95 (218)
Q Consensus 88 ~~~~~~~~ 95 (218)
+.+-.++.
T Consensus 100 ~~l~~~~~ 107 (264)
T PRK01215 100 RMILEKYE 107 (264)
T ss_pred HHHHHHHH
Confidence 55444443
No 341
>KOG0092 consensus GTPase Rab5/YPT51 and related small G protein superfamily GTPases [Intracellular trafficking, secretion, and vesicular transport]
Probab=62.12 E-value=24 Score=26.40 Aligned_cols=41 Identities=12% Similarity=0.075 Sum_probs=34.0
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHH--hCCccEEEeCCCCC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINH--FGKLDILVNAAAGN 59 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~--~~~ld~li~~ag~~ 59 (218)
|.++..+.-|+++.++...+-+++++- ..+.|++|.-+|.-
T Consensus 77 gA~AAivvYDit~~~SF~~aK~WvkeL~~~~~~~~vialvGNK 119 (200)
T KOG0092|consen 77 GANAAIVVYDITDEESFEKAKNWVKELQRQASPNIVIALVGNK 119 (200)
T ss_pred CCcEEEEEEecccHHHHHHHHHHHHHHHhhCCCCeEEEEecch
Confidence 677889999999999999998888763 24699999999953
No 342
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=61.16 E-value=77 Score=26.88 Aligned_cols=94 Identities=15% Similarity=0.162 Sum_probs=48.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeE--EEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCC-------CCCHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIG--LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAE-------DLSPNGF 72 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~--~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~-------~~~~~~~ 72 (218)
+.++++++.+.+.++..|..+.+ +.+|..+... . ...+.+|.|+..+.....+.+. ..+.+++
T Consensus 269 D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~---~-----~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~ 340 (426)
T TIGR00563 269 DIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ---W-----AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDI 340 (426)
T ss_pred eCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc---c-----ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHH
Confidence 35677788888877777655433 4455443221 0 0124799999876543322221 1233333
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 027828 73 RTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 73 ~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
.+. ..-...+.+.+.+.++. +|++|+.+++.
T Consensus 341 ~~l----~~lQ~~lL~~a~~~Lkp----------gG~lvystcs~ 371 (426)
T TIGR00563 341 AEL----AELQSEILDAIWPLLKT----------GGTLVYATCSV 371 (426)
T ss_pred HHH----HHHHHHHHHHHHHhcCC----------CcEEEEEeCCC
Confidence 222 11233344444544444 68899887754
No 343
>PRK14967 putative methyltransferase; Provisional
Probab=60.66 E-value=71 Score=24.18 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=26.5
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
.+...++.+.+.+...+.++.++..|+.+. + ..+.+|.||.|.++..
T Consensus 67 ~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~-----~~~~fD~Vi~npPy~~ 113 (223)
T PRK14967 67 ISRRAVRSARLNALLAGVDVDVRRGDWARA------V-----EFRPFDVVVSNPPYVP 113 (223)
T ss_pred CCHHHHHHHHHHHHHhCCeeEEEECchhhh------c-----cCCCeeEEEECCCCCC
Confidence 344555555554444455566666665431 1 1247999999987543
No 344
>TIGR03704 PrmC_rel_meth putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific. This protein family is closely related to two different families of protein-(glutamine-N5) methyltransferase. The first is PrmB, which modifies ribosomal protein L3 in some bacteria. The second is PrmC (HemK), which modifies peptide chain release factors 1 and 2 in most bacteria and also in eukaryotes. The glutamine side chain-binding motif NPPY shared by PrmB and PrmC is N[VAT]PY in this family. The protein substrate is unknown.
Probab=60.66 E-value=56 Score=25.47 Aligned_cols=58 Identities=22% Similarity=0.200 Sum_probs=32.1
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHH
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPN 70 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~ 70 (218)
.+++.++.+.+-+...+ ..++.+|+.+. +.. .. .+++|+||.|..+.....+...+.+
T Consensus 118 is~~al~~A~~N~~~~~--~~~~~~D~~~~--l~~---~~---~~~fDlVv~NPPy~~~~~~~~~~~e 175 (251)
T TIGR03704 118 IDPAAVRCARRNLADAG--GTVHEGDLYDA--LPT---AL---RGRVDILAANAPYVPTDAIALMPPE 175 (251)
T ss_pred CCHHHHHHHHHHHHHcC--CEEEEeechhh--cch---hc---CCCEeEEEECCCCCCchhhhcCCHH
Confidence 34555655555554433 45677787542 111 01 1479999999987654433333333
No 345
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=59.87 E-value=2.7 Score=32.43 Aligned_cols=113 Identities=13% Similarity=0.136 Sum_probs=66.6
Q ss_pred EEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCC
Q 027828 25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASS 104 (218)
Q Consensus 25 ~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ 104 (218)
+-.|+.|...+++++-. .++|-+||-.+.... .......-..++|+.|..++.+.+..+-+
T Consensus 92 Iy~DILD~K~L~eIVVn-----~RIdWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vAa~~kL--------- 152 (366)
T KOG2774|consen 92 IYLDILDQKSLEEIVVN-----KRIDWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVAAKHKL--------- 152 (366)
T ss_pred hhhhhhccccHHHhhcc-----cccceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHHHHcCe---------
Confidence 45666666666655432 378988887663221 11222344677999999999887765422
Q ss_pred CCCceEEEecccccccCC------------cchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeee-ecCcccC
Q 027828 105 SSGGIIINISATLHYTAT------------WYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGI-APGPIKD 164 (218)
Q Consensus 105 ~~~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v-~pG~v~t 164 (218)
++..-|.++++.+. .+...|++||--.+-+-+.+-. ++|+.+-++ .||.+..
T Consensus 153 ----~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~h----rFg~dfr~~rfPg~is~ 217 (366)
T KOG2774|consen 153 ----KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNH----RFGVDFRSMRFPGIISA 217 (366)
T ss_pred ----eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHh----hcCccceecccCccccc
Confidence 24444444544321 2566799999877666655533 445555554 4665543
No 346
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=56.03 E-value=68 Score=22.51 Aligned_cols=62 Identities=13% Similarity=0.204 Sum_probs=38.1
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~ 76 (218)
-+.+.+++.|.++.....=-.|.+++.+.++++.+ +.|+||.+-|..... .+...+.+.+..
T Consensus 31 ~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~l~~~~~---~~DliIttGG~g~g~--~D~t~~ai~~~g 92 (144)
T TIGR00177 31 LLAALLEEAGFNVSRLGIVPDDPEEIREILRKAVD---EADVVLTTGGTGVGP--RDVTPEALEELG 92 (144)
T ss_pred HHHHHHHHCCCeEEEEeecCCCHHHHHHHHHHHHh---CCCEEEECCCCCCCC--CccHHHHHHHhC
Confidence 45566667787766554444456777777666543 799999997754422 355555555443
No 347
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=55.03 E-value=81 Score=26.07 Aligned_cols=96 Identities=20% Similarity=0.206 Sum_probs=54.5
Q ss_pred CCcHHHHHHHHHHHHhcCCC-eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC-------CCCCCCCHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL-------VPAEDLSPNGFR 73 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~-~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~-------~~~~~~~~~~~~ 73 (218)
+++..+++.+.+.++..|.. +..+..|-+........- +++|-++.=|..... .-.+..+.+++.
T Consensus 189 D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~~~~~-------~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~ 261 (355)
T COG0144 189 DVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAELLPGG-------EKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIA 261 (355)
T ss_pred cCCHHHHHHHHHHHHHcCCCceEEEeccccccccccccc-------CcCcEEEECCCCCCCcccccCccccccCCHHHHH
Confidence 45677888888888887764 456666655433221110 147777765553332 222344444443
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEeccccc
Q 027828 74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLH 118 (218)
Q Consensus 74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~ 118 (218)
.. ..-...++..+...++. +|.+|+.+++..
T Consensus 262 ~l----~~lQ~~iL~~a~~~lk~----------GG~LVYSTCS~~ 292 (355)
T COG0144 262 EL----AKLQKEILAAALKLLKP----------GGVLVYSTCSLT 292 (355)
T ss_pred HH----HHHHHHHHHHHHHhcCC----------CCEEEEEccCCc
Confidence 33 33345566666666644 689999888653
No 348
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=54.37 E-value=52 Score=24.02 Aligned_cols=38 Identities=21% Similarity=0.054 Sum_probs=28.6
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
.+..+.+|-.++++++++++.++...++ +.|..+|...
T Consensus 100 g~d~I~lD~~~~~~~~~~v~~l~~~~~~--v~ie~SGGI~ 137 (169)
T PF01729_consen 100 GADIIMLDNMSPEDLKEAVEELRELNPR--VKIEASGGIT 137 (169)
T ss_dssp T-SEEEEES-CHHHHHHHHHHHHHHTTT--SEEEEESSSS
T ss_pred CCCEEEecCcCHHHHHHHHHHHhhcCCc--EEEEEECCCC
Confidence 4788999999999999999999777555 6666677543
No 349
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=53.83 E-value=59 Score=23.24 Aligned_cols=46 Identities=22% Similarity=0.293 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
+.|..+.++|.+.|..+.++.+| ..+.+..+.+++ +++.|+.|...
T Consensus 53 ~sL~~L~~~L~~~g~~L~v~~g~------~~~~l~~l~~~~-~~~~V~~~~~~ 98 (165)
T PF00875_consen 53 ESLADLQESLRKLGIPLLVLRGD------PEEVLPELAKEY-GATAVYFNEEY 98 (165)
T ss_dssp HHHHHHHHHHHHTTS-EEEEESS------HHHHHHHHHHHH-TESEEEEE---
T ss_pred HHHHHHHHHHHhcCcceEEEecc------hHHHHHHHHHhc-CcCeeEecccc
Confidence 45778888888889999999998 233333444443 48888888764
No 350
>PRK03670 competence damage-inducible protein A; Provisional
Probab=52.45 E-value=1.1e+02 Score=23.94 Aligned_cols=81 Identities=12% Similarity=-0.022 Sum_probs=50.6
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
..-+.+.|.+.|.++..+..==-|.+.+.+.+..+.+ ...|+||.+.|... ...+.+.+.+.+.++..+.-.-...
T Consensus 22 ~~~la~~L~~~G~~v~~~~iV~Dd~~~I~~~l~~a~~--~~~DlVIttGGlGp--t~dD~T~eava~a~g~~l~~~~e~~ 97 (252)
T PRK03670 22 SAFIAQKLTEKGYWVRRITTVGDDVEEIKSVVLEILS--RKPEVLVISGGLGP--THDDVTMLAVAEALGRELVLCEDCL 97 (252)
T ss_pred HHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHHhh--CCCCEEEECCCccC--CCCCchHHHHHHHhCCCCcCCHHHH
Confidence 3456777888888776655544456666666655433 25799999877544 2356777777777776665544444
Q ss_pred HHHHH
Q 027828 88 HEALK 92 (218)
Q Consensus 88 ~~~~~ 92 (218)
+.+-.
T Consensus 98 ~~i~~ 102 (252)
T PRK03670 98 ERIKE 102 (252)
T ss_pred HHHHH
Confidence 33333
No 351
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=51.92 E-value=19 Score=23.82 Aligned_cols=49 Identities=22% Similarity=0.173 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHHhcC--CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 4 RKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
+...++-+...+...+ .++.++.+|+.+.. +.. ..+++|+++.|..+..
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~D~~~~~------~~~--~~~~~D~Iv~npP~~~ 82 (117)
T PF13659_consen 32 DPEAVELARRNLPRNGLDDRVEVIVGDARDLP------EPL--PDGKFDLIVTNPPYGP 82 (117)
T ss_dssp SHHHHHHHHHHCHHCTTTTTEEEEESHHHHHH------HTC--TTT-EEEEEE--STTS
T ss_pred CHHHHHHHHHHHHHccCCceEEEEECchhhch------hhc--cCceeEEEEECCCCcc
Confidence 4455555555555543 36788888874331 111 1258999999998754
No 352
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=51.68 E-value=1.3e+02 Score=24.49 Aligned_cols=94 Identities=10% Similarity=-0.006 Sum_probs=59.9
Q ss_pred HHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccccc----
Q 027828 44 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATLH---- 118 (218)
Q Consensus 44 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~iv~iss~~~---- 118 (218)
+.+..-|++|..||..... ..+..+ .+.. ...+.+.+.+.+.+.. . .+.+|.+|-...
T Consensus 74 ~~~~daDivvitaG~~~k~---g~tR~d---ll~~----N~~i~~~i~~~i~~~~~~-------~~iiivvsNPvD~~t~ 136 (322)
T cd01338 74 VAFKDADWALLVGAKPRGP---GMERAD---LLKA----NGKIFTAQGKALNDVASR-------DVKVLVVGNPCNTNAL 136 (322)
T ss_pred HHhCCCCEEEEeCCCCCCC---CCcHHH---HHHH----HHHHHHHHHHHHHhhCCC-------CeEEEEecCcHHHHHH
Confidence 3445789999999975421 223322 3333 4556677777777654 2 466777765332
Q ss_pred ----cc-CCcchhHhHHhHHHHHHHHHHHHhhhc-CCCCeEE
Q 027828 119 ----YT-ATWYQIHVSAAKAAVDSITRSLALEWG-TDYAIRV 154 (218)
Q Consensus 119 ----~~-~~~~~~~y~~sK~a~~~~~~~la~el~-~~~gi~v 154 (218)
.. +.|....|++++.--..|...+++.+. +...|+.
T Consensus 137 ~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~ 178 (322)
T cd01338 137 IAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKN 178 (322)
T ss_pred HHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEE
Confidence 12 377778899998888888888888775 2334553
No 353
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=50.60 E-value=1.4e+02 Score=24.30 Aligned_cols=130 Identities=17% Similarity=0.127 Sum_probs=79.0
Q ss_pred hcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC----------------------------------
Q 027828 17 SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV---------------------------------- 62 (218)
Q Consensus 17 ~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~---------------------------------- 62 (218)
+.|.=..-+..|.-+.+--+..++.+++.+|++|.+|+.-+.+..+
T Consensus 100 ~kGlyAksingDaFS~e~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~ 179 (398)
T COG3007 100 QKGLYAKSINGDAFSDEMKQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEA 179 (398)
T ss_pred hcCceeeecccchhhHHHHHHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeee
Confidence 3455556788999999998999999999999999999877643211
Q ss_pred CCCCCCHHHHHHHHhhhhhh-HHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCc--chhHhHHhHHHHHHHH
Q 027828 63 PAEDLSPNGFRTVIEIDSVG-TFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW--YQIHVSAAKAAVDSIT 139 (218)
Q Consensus 63 ~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~--~~~~y~~sK~a~~~~~ 139 (218)
.+...+.++++....+.--- .-+++.+++..-.-.. ..+-|..|-++....+| ..+..+.+|.=++.-+
T Consensus 180 ~lepAseqEI~~Tv~VMGGeDWq~WidaLl~advlae--------g~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~ 251 (398)
T COG3007 180 TLEPASEQEIADTVAVMGGEDWQMWIDALLEADVLAE--------GAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKS 251 (398)
T ss_pred ecccccHHHHHHHHHhhCcchHHHHHHHHHhcccccc--------CceEEEEEecCCccccceeeccccchhhhcHHHHH
Confidence 01122333444332221111 1222333322111111 45667777766666665 3356789999999999
Q ss_pred HHHHhhhcCCCCeEEe
Q 027828 140 RSLALEWGTDYAIRVN 155 (218)
Q Consensus 140 ~~la~el~~~~gi~v~ 155 (218)
+.+...|+ ..|=..+
T Consensus 252 ~~inekLa-~~gG~A~ 266 (398)
T COG3007 252 LAINEKLA-ALGGGAR 266 (398)
T ss_pred HHHHHHHH-hcCCCee
Confidence 98888887 5543333
No 354
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=50.49 E-value=1e+02 Score=22.87 Aligned_cols=54 Identities=17% Similarity=0.050 Sum_probs=34.5
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 027828 47 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 47 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
|+.|+|+.|.|...-....+.+.+ .+..|+...+..++..+| . ...+|+.+.+.
T Consensus 49 g~~DVIi~Ns~LWDl~ry~~~~~~----~Y~~NL~~Lf~rLk~~lp----~---------~allIW~tt~P 102 (183)
T cd01842 49 GRLDLVIMNSCLWDLSRYQRNSMK----TYRENLERLFSKLDSVLP----I---------ECLIVWNTAMP 102 (183)
T ss_pred CceeEEEEecceecccccCCCCHH----HHHHHHHHHHHHHHhhCC----C---------ccEEEEecCCC
Confidence 578999999998776555544444 444556555555554443 1 46688877665
No 355
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=49.99 E-value=1.7e+02 Score=25.33 Aligned_cols=93 Identities=16% Similarity=0.091 Sum_probs=51.4
Q ss_pred CCcHHHHHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCC-------CCHHHHH
Q 027828 2 GRRKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED-------LSPNGFR 73 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~-------~~~~~~~ 73 (218)
.++..+++.+.+.+...|. ++.+...|..+... .+. +.+|.|+.-|..+..+-+.. .+.+++.
T Consensus 145 D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~---~~~------~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~ 215 (470)
T PRK11933 145 EYSASRVKVLHANISRCGVSNVALTHFDGRVFGA---ALP------ETFDAILLDAPCSGEGTVRKDPDALKNWSPESNL 215 (470)
T ss_pred eCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhh---hch------hhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHH
Confidence 3567788888888887775 34555666553211 111 25788887666544333322 2222222
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 027828 74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
....-...++..+...++. +|.+|+.+++-
T Consensus 216 ----~l~~lQ~~iL~~A~~~Lkp----------GG~LVYSTCT~ 245 (470)
T PRK11933 216 ----EIAATQRELIESAFHALKP----------GGTLVYSTCTL 245 (470)
T ss_pred ----HHHHHHHHHHHHHHHHcCC----------CcEEEEECCCC
Confidence 2233344555555555443 68999988864
No 356
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=49.66 E-value=61 Score=22.83 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=29.1
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHH
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRV 38 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~ 38 (218)
|+.+.+.+++++.-+.+.++.|.+..+.+++..+.+
T Consensus 81 R~~e~~~~i~~eal~~~~kv~W~QlGi~n~ea~~~~ 116 (140)
T COG1832 81 RRSEAAPEVAREALEKGAKVVWLQLGIRNEEAAEKA 116 (140)
T ss_pred cChhhhHHHHHHHHhhCCCeEEEecCcCCHHHHHHH
Confidence 677778888888888888999999999999854433
No 357
>PRK11430 putative CoA-transferase; Provisional
Probab=49.62 E-value=73 Score=26.63 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=23.6
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 23 ~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
..+.+|+.+++..+-+.+-++ .-|+||.|--
T Consensus 72 rsv~lDLk~~~Gr~~~~~L~~----~ADVvien~r 102 (381)
T PRK11430 72 ESVVLDLKNDHDKSIFINMLK----QADVLAENFR 102 (381)
T ss_pred eEEEecCCCHHHHHHHHHHHh----cCCEEEeCCC
Confidence 457899999998766555443 5799999876
No 358
>PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis []. It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage.
Probab=49.62 E-value=87 Score=26.34 Aligned_cols=101 Identities=7% Similarity=0.056 Sum_probs=60.4
Q ss_pred ccEEEeCCCCCCCCC-CCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCCcchhH
Q 027828 49 LDILVNAAAGNFLVP-AEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIH 127 (218)
Q Consensus 49 ld~li~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~ 127 (218)
+.-+|++-|...... -.+.+...++ ..=++.+++.|.+.-.+.. ..++|.|+|..+.. ...+..
T Consensus 204 i~t~is~LGsts~~a~~s~~~~~~ID------y~Lnl~laq~f~~~~~~~~--------~K~~vIvTSfn~~~-~s~~f~ 268 (410)
T PF08732_consen 204 IKTMISTLGSTSAQAKSSKAARHKID------YQLNLDLAQTFANDIKNTG--------NKKLVIVTSFNNNA-ISSMFP 268 (410)
T ss_pred hhhheecCCCChhhccccccchhhcc------ccccHHHHHHhhhhhccCC--------CceEEEEEecCcch-hhhhhh
Confidence 456777777543221 1223333333 3345667777776655655 78999999987542 234456
Q ss_pred hHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCcc
Q 027828 128 VSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGV 168 (218)
Q Consensus 128 y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~ 168 (218)
|--.|.=++.=.+ ..+. ++=-++..++||++-.....
T Consensus 269 Yfk~K~~LE~dl~---~~l~-~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 269 YFKTKGELENDLQ---NLLP-PKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred hhHHHHHHHHHHH---hhcc-cccceEEEecCccccCCCCC
Confidence 7778877665333 3343 32347889999999765443
No 359
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=49.60 E-value=95 Score=22.56 Aligned_cols=28 Identities=18% Similarity=0.111 Sum_probs=15.4
Q ss_pred CCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 30 RKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 30 s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
++++.++++.+.++++++.++++-+..|
T Consensus 54 ~~~~~~~~~~~~l~~~yp~l~i~g~~~g 81 (171)
T cd06533 54 AKPEVLEKAAERLRARYPGLKIVGYHHG 81 (171)
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 3455555555666666666665554333
No 360
>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]
Probab=48.03 E-value=88 Score=23.49 Aligned_cols=46 Identities=20% Similarity=0.028 Sum_probs=31.0
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~ 61 (218)
.+.+.++-+.+-..+.++++.++.+|+++.. +++|.+|.|..+...
T Consensus 76 iD~~a~ei~r~N~~~l~g~v~f~~~dv~~~~-------------~~~dtvimNPPFG~~ 121 (198)
T COG2263 76 IDPEALEIARANAEELLGDVEFVVADVSDFR-------------GKFDTVIMNPPFGSQ 121 (198)
T ss_pred cCHHHHHHHHHHHHhhCCceEEEEcchhhcC-------------CccceEEECCCCccc
Confidence 3455565555555555667888888887644 377889999886654
No 361
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=47.49 E-value=1.1e+02 Score=22.47 Aligned_cols=25 Identities=20% Similarity=0.209 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHHHHHHhCCccEEEe
Q 027828 30 RKREDAVRVVESTINHFGKLDILVN 54 (218)
Q Consensus 30 s~~~~~~~~~~~~~~~~~~ld~li~ 54 (218)
++++.++.+.+.++++++.++++-+
T Consensus 56 ~~~~v~~~~~~~l~~~yP~l~i~g~ 80 (177)
T TIGR00696 56 GKPDVLQQLKVKLIKEYPKLKIVGA 80 (177)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 3455666666666666666665544
No 362
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=47.21 E-value=1.2e+02 Score=24.18 Aligned_cols=50 Identities=28% Similarity=0.447 Sum_probs=36.4
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCC-HHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRK-REDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
-+++=|++..+..++.+..+..+.+.-++ ++.+.+++++. ++|+||..--
T Consensus 113 GD~~YL~~Cl~~Ykql~i~a~G~~~~E~eqp~~i~~Ll~~~-----~PDIlViTGH 163 (287)
T PF05582_consen 113 GDEEYLNKCLKVYKQLGIPAVGIHVPEKEQPEKIYRLLEEY-----RPDILVITGH 163 (287)
T ss_pred CCHHHHHHHHHHHHHcCCceEEEEechHHhhHHHHHHHHHc-----CCCEEEEeCc
Confidence 45666888888888888888887776654 45566666654 8999998654
No 363
>PF11965 DUF3479: Domain of unknown function (DUF3479); InterPro: IPR022571 This functionally uncharacterised domain, found N-terminal to PF02514 from PFAM, occurs in magnesium chelatase subunit H, which is involved in chlorophyll biosynthesis. It is found in bacteria, green plants and archaea. It is around 160 amino acids in length.; GO: 0016851 magnesium chelatase activity
Probab=46.96 E-value=88 Score=22.80 Aligned_cols=118 Identities=12% Similarity=-0.063 Sum_probs=58.7
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHH-hCCccEEEeCCCCCCCCCCCCCCHHHHHHHHh------hhhhhHHHHHHHHHHH
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINH-FGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE------IDSVGTFIMCHEALKY 93 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~-~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~------~n~~~~~~l~~~~~~~ 93 (218)
+++++.+|-+-...+.+..+.+... .+.+++-+|+++-+...+ ..++.++..+. .+..-.--..+.+.|.
T Consensus 2 r~V~vtld~~~~~al~~aa~~l~~~~~p~l~l~~~~~~el~~~~---~~~~~~~~aia~ADii~~smlF~ed~v~~l~~~ 78 (164)
T PF11965_consen 2 RFVIVTLDEHYNSALYRAAARLNRDHCPGLELSVFAAAELERDP---EALEECEAAIARADIIFGSMLFIEDHVRPLLPA 78 (164)
T ss_pred EEEEEeCchhhhHHHHHHHHHHhhccCCCeEEEEEeHHHhhcCh---HHHHHHHHHHHhCCEEEeehhhhHHHHHHHHHH
Confidence 3566667777667777777776665 556777777776332111 11233332222 1122222345666777
Q ss_pred HHhcCCCCCCCCCCceEEEecccccccCCcchhHh--HHhHHHHHHHHHHHHhhhc
Q 027828 94 LKKGGRGQASSSSGGIIINISATLHYTATWYQIHV--SAAKAAVDSITRSLALEWG 147 (218)
Q Consensus 94 ~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y--~~sK~a~~~~~~~la~el~ 147 (218)
+...... -..+|.++|........-.+.| +..+.+.-.++|.+...+.
T Consensus 79 L~~~r~~------~~a~i~~~sapelm~lTrlG~f~m~~~~~g~~~~lKkl~~~~~ 128 (164)
T PF11965_consen 79 LEARRDH------CPAMIIFESAPELMRLTRLGKFSMGGEKSGPPALLKKLRGKLK 128 (164)
T ss_pred HHHHHcc------CCEEEEEcCHHHHHHHhcccceecCCCCcchHHHHHHHHhhcc
Confidence 6654211 1223334443333322222222 5556677777887765543
No 364
>PRK09489 rsmC 16S ribosomal RNA m2G1207 methyltransferase; Provisional
Probab=46.77 E-value=86 Score=25.79 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=38.0
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
+...++.+.+.+...+.+..++..|+.+. + .+++|.||.|..+... +..+....
T Consensus 229 s~~Al~~A~~nl~~n~l~~~~~~~D~~~~---------~---~~~fDlIvsNPPFH~g--------------~~~~~~~~ 282 (342)
T PRK09489 229 SAAALESSRATLAANGLEGEVFASNVFSD---------I---KGRFDMIISNPPFHDG--------------IQTSLDAA 282 (342)
T ss_pred CHHHHHHHHHHHHHcCCCCEEEEcccccc---------c---CCCccEEEECCCccCC--------------ccccHHHH
Confidence 33444444444444444444455554321 0 1467888887653210 11122233
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCceEEEecc
Q 027828 84 FIMCHEALKYLKKGGRGQASSSSGGIIINISA 115 (218)
Q Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss 115 (218)
..+.+.+..++++ +|.++++..
T Consensus 283 ~~~i~~a~~~Lkp----------gG~L~iVan 304 (342)
T PRK09489 283 QTLIRGAVRHLNS----------GGELRIVAN 304 (342)
T ss_pred HHHHHHHHHhcCc----------CCEEEEEEe
Confidence 4455666666665 688887765
No 365
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=46.52 E-value=1.1e+02 Score=22.09 Aligned_cols=71 Identities=13% Similarity=0.138 Sum_probs=45.0
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhH
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGT 83 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 83 (218)
.+...+++.|.++..+..=--|.+.+.+.++++.+. ...|+||...|... .-.+.+.+.+...++.-+-|.
T Consensus 26 ~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~-~~~DlVIttGGtg~--g~~D~t~eal~~l~~~~l~G~ 96 (163)
T TIGR02667 26 YLVERLTEAGHRLADRAIVKDDIYQIRAQVSAWIAD-PDVQVILITGGTGF--TGRDVTPEALEPLFDKTVEGF 96 (163)
T ss_pred HHHHHHHHCCCeEEEEEEcCCCHHHHHHHHHHHHhc-CCCCEEEECCCcCC--CCCCCcHHHHHHHHCCcCCcH
Confidence 345556667777765555445677777777665422 36899999877543 234677777777765555553
No 366
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=46.43 E-value=75 Score=24.65 Aligned_cols=74 Identities=9% Similarity=0.034 Sum_probs=43.5
Q ss_pred HHHHHHHHHHH-hcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC-CCCCCCCCHHHHHHHHhhhhhh
Q 027828 6 TVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 6 ~~l~~~~~~l~-~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
..++++.+.+. ....++.++.+==.+.+++.+++.+. ....+|++|.+.|..- ... .....+.|...+......
T Consensus 19 ~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~--~l~~Pd~~I~svGt~I~~~~-~~~~d~~w~~~i~~~w~~ 94 (247)
T PF05116_consen 19 EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREY--NLPQPDYIITSVGTEIYYGE-NWQPDEEWQAHIDERWDR 94 (247)
T ss_dssp HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHC--T-EE-SEEEETTTTEEEESS-TTEE-HHHHHHHHTT--H
T ss_pred HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhC--CCCCCCEEEecCCeEEEEcC-CCcChHHHHHHHHhcCCh
Confidence 34555555555 34567888877778888888776543 2347899999999421 122 344556788887775544
No 367
>TIGR03253 oxalate_frc formyl-CoA transferase. This enzyme, formyl-CoA transferase, transfers coenzyme A from formyl-CoA to oxalate. It forms a pathway, together with oxalyl-CoA decarboxylase, for oxalate degradation; decarboxylation by the latter gene regenerates formyl-CoA. The two enzymes typically are encoded by a two-gene operon.
Probab=46.09 E-value=1.3e+02 Score=25.43 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=23.7
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 23 ~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
..+.+|+.+++..+.+.+-++ +-|+||.|-.-
T Consensus 67 rsi~lDLk~~~g~~~l~~Lv~----~ADVvien~rp 98 (415)
T TIGR03253 67 RSITLNTKTPEGKEVLEELIK----KADVMVENFGP 98 (415)
T ss_pred eEEEeeCCCHHHHHHHHHHHh----hCCEEEECCCC
Confidence 457889999998666655444 46999998863
No 368
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=45.72 E-value=1.2e+02 Score=24.71 Aligned_cols=52 Identities=13% Similarity=0.091 Sum_probs=40.9
Q ss_pred HHHHHHHHHhcCCCe-eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 8 LRSAVAALHSLGIPA-IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 8 l~~~~~~l~~~~~~~-~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
+.++.+.+...+.++ ..+.++-.+.+..+.+.+.+.+.++.+++-++..|.+
T Consensus 252 ~~~ll~~l~~~~~elvTi~~G~~~~~~~a~~l~~~l~~~~p~~eve~~~GgQ~ 304 (313)
T PF13684_consen 252 LKKLLEKLLDEDGELVTIYYGEDVSEEEAEALAEFLEEKYPDVEVEVYDGGQP 304 (313)
T ss_pred HHHHHHHhhccCCeEEEEEecCCCCHHHHHHHHHHHHHHhCCeEEEEEECCCc
Confidence 566677666556665 4566777778899999999999999999999988854
No 369
>TIGR01346 isocit_lyase isocitrate lyase. Isocitrate lyase and malate synthase are the enzymes of the glyoxylate shunt, a pathway associated with the TCA cycle.
Probab=45.55 E-value=2.1e+02 Score=25.12 Aligned_cols=44 Identities=16% Similarity=0.006 Sum_probs=36.9
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~ 62 (218)
..++.|.....-|.++.+++.+.+++.++.--..+|+.....++
T Consensus 379 yaDliW~ET~~Pdl~~A~~Fa~~v~~~~P~k~LaYN~SPSFNW~ 422 (527)
T TIGR01346 379 YADLIWMETSTPDLELAKKFAEGVKSKFPDQLLAYNLSPSFNWS 422 (527)
T ss_pred cccEEEecCCCCCHHHHHHHHHHHHHHCCCCeEEecCCCCcccc
Confidence 35788899999999999999999999999887788887765543
No 370
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=45.43 E-value=91 Score=23.95 Aligned_cols=30 Identities=23% Similarity=0.226 Sum_probs=23.6
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHH
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKRE 33 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~ 33 (218)
+.+.++++.+.+++.+.+..++.+|+++..
T Consensus 16 n~~~le~l~~~~~~~~~D~vv~~GDl~~~g 45 (224)
T cd07388 16 DLEALEKLVGLAPETGADAIVLIGNLLPKA 45 (224)
T ss_pred CHHHHHHHHHHHhhcCCCEEEECCCCCCCC
Confidence 456788888877777788899999998854
No 371
>PF01189 Nol1_Nop2_Fmu: NOL1/NOP2/sun family; InterPro: IPR001678 This domain is found in archaeal, bacterial and eukaryotic proteins. In the archaea and bacteria, they are annotated as putative nucleolar protein, Sun (Fmu) family protein or tRNA/rRNA cytosine-C5-methylase. The majority have the S-adenosyl methionine (SAM) binding domain and are related to Escherichia coli Fmu (Sun) protein (16S rRNA m5C 967 methyltransferase) whose structure has been determined []. In the eukaryota, the majority are annotated as being 'hypothetical protein', nucleolar protein or the Nop2/Sun (Fmu) family. Unlike their bacterial homologues, few of the eukaryotic members in this family have a the SAM binding signature. Despite this, Saccharomyces cerevisiae (Baker's yeast) Nop2p is a probable RNA m5C methyltransferase []. It is essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis []; localized to the nucleolus and is essential for viability []. Reduced Nop2p expression limits yeast growth and decreases levels of mature 60S ribosomal subunits while altering rRNA processing []. There is substantial identity between Nop2p and Homo sapiens (Human) p120 (NOL1), which is also called the proliferation-associated nucleolar antigen [, ].; PDB: 3M4X_A 2FRX_B 2YXL_A 1IXK_A 1SQG_A 1SQF_A 3M6U_B 3M6V_B 3M6W_A 3M6X_A ....
Probab=45.39 E-value=1.4e+02 Score=23.70 Aligned_cols=100 Identities=18% Similarity=0.120 Sum_probs=51.5
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHH---HHHhh
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR---TVIEI 78 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~---~~~~~ 78 (218)
.++..+++.+.+.++..|.....+.. .|. ..+...... ..+|.|+.-|.....+.+..-+.-.|. ..+..
T Consensus 117 D~~~~Rl~~l~~~~~r~g~~~v~~~~--~D~---~~~~~~~~~--~~fd~VlvDaPCSg~G~i~r~p~~~~~~~~~~~~~ 189 (283)
T PF01189_consen 117 DISPKRLKRLKENLKRLGVFNVIVIN--ADA---RKLDPKKPE--SKFDRVLVDAPCSGLGTIRRNPDIKWRRSPEDIEK 189 (283)
T ss_dssp ESSHHHHHHHHHHHHHTT-SSEEEEE--SHH---HHHHHHHHT--TTEEEEEEECSCCCGGGTTTCTTHHHHE-TTHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCceEEEEe--ecc---ccccccccc--cccchhhcCCCccchhhhhhccchhhcccccccch
Confidence 35678888888888888765443332 211 122111111 158988876665444333332222232 22222
Q ss_pred hhhhHHHHHHHHHHHH----HhcCCCCCCCCCCceEEEeccccc
Q 027828 79 DSVGTFIMCHEALKYL----KKGGRGQASSSSGGIIINISATLH 118 (218)
Q Consensus 79 n~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~iv~iss~~~ 118 (218)
-..-...+++.+.+.+ +. +|++|+.+++..
T Consensus 190 l~~~Q~~iL~~a~~~~~~~~k~----------gG~lvYsTCS~~ 223 (283)
T PF01189_consen 190 LAELQREILDNAAKLLNIDFKP----------GGRLVYSTCSLS 223 (283)
T ss_dssp HHHHHHHHHHHHHHCEHHHBEE----------EEEEEEEESHHH
T ss_pred HHHHHHHHHHHHHHhhcccccC----------CCeEEEEeccHH
Confidence 2233455555555544 33 689999888653
No 372
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=45.23 E-value=54 Score=22.68 Aligned_cols=45 Identities=13% Similarity=0.209 Sum_probs=25.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
+|+.++++++++++. +..+..+.. .+ +.+.. ...|++|++.+...
T Consensus 43 nRt~~ra~~l~~~~~--~~~~~~~~~--~~---~~~~~-------~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 43 NRTPERAEALAEEFG--GVNIEAIPL--ED---LEEAL-------QEADIVINATPSGM 87 (135)
T ss_dssp ESSHHHHHHHHHHHT--GCSEEEEEG--GG---HCHHH-------HTESEEEE-SSTTS
T ss_pred ECCHHHHHHHHHHcC--ccccceeeH--HH---HHHHH-------hhCCeEEEecCCCC
Confidence 577788888777772 122333322 22 22222 26899999988654
No 373
>PF05036 SPOR: Sporulation related domain; InterPro: IPR007730 This 70 residue domain is composed of two 35 residue repeats that are found in bacterial proteins involved in sporulation and cell division, such as FtsN, CwlM and RlpA. This repeat might be involved in binding peptidoglycan. FtsN is an essential cell division protein with a simple bitopic topology: a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. The repeats lie at the periplasmic C terminus, which has an RNP-like fold []. FtsN localises to the septum ring complex. The CwlM protein is a cell wall hydrolase, where the C-terminal region, including the repeats, determines substrate specificity []. RlpA is a rare lipoprotein A protein that may be important for cell division. Its N-terminal cysteine may be attached to thioglyceride and N-fatty acyl residues [].; PDB: 1X60_A 1UTA_A.
Probab=44.57 E-value=63 Score=19.21 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=23.0
Q ss_pred CcHHHHHHHHHHHHhcCCC------------eeEEEecCCCHHHHHHHHHHHH
Q 027828 3 RRKTVLRSAVAALHSLGIP------------AIGLEGDVRKREDAVRVVESTI 43 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~------------~~~~~~D~s~~~~~~~~~~~~~ 43 (218)
++.+.+++..+.|...|.. ..+..+...+.++.+.+...++
T Consensus 13 ~~~~~A~~~~~~l~~~g~~~~~~~~~~~~~~yrV~~G~f~~~~~A~~~~~~l~ 65 (76)
T PF05036_consen 13 SSEENAERLLAKLKKKGPDAYVVQVSKGGPWYRVRVGPFSSREEAEAALRKLK 65 (76)
T ss_dssp S-HHHHHHHHHHHHHHT-----EEEEEETTCEEEEECCECTCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCcceEEEecCCceEEEEECCCCCHHHHHHHHHHHh
Confidence 4556666666666655432 1333456666677777777766
No 374
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=44.46 E-value=1.2e+02 Score=21.93 Aligned_cols=44 Identities=11% Similarity=0.004 Sum_probs=27.2
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
+.+.++.+.+.+...+.++.++.+|+.+.. .+.+|.++.|....
T Consensus 50 s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~~fD~Vi~n~p~~ 93 (179)
T TIGR00537 50 NPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RGKFDVILFNPPYL 93 (179)
T ss_pred CHHHHHHHHHHHHHcCCceEEEEccccccc------------CCcccEEEECCCCC
Confidence 445555555555555556667777765421 14789999987754
No 375
>PRK09328 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=44.40 E-value=1.1e+02 Score=23.82 Aligned_cols=45 Identities=22% Similarity=0.155 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHH-hcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 5 KTVLRSAVAALH-SLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 5 ~~~l~~~~~~l~-~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
...++.+.+.+. ....++.++.+|+.+... .+++|++|.|.....
T Consensus 142 ~~~l~~a~~n~~~~~~~~i~~~~~d~~~~~~-----------~~~fD~Iv~npPy~~ 187 (275)
T PRK09328 142 PEALAVARRNAKHGLGARVEFLQGDWFEPLP-----------GGRFDLIVSNPPYIP 187 (275)
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEccccCcCC-----------CCceeEEEECCCcCC
Confidence 344444444333 122356677777643210 247899999987654
No 376
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]
Probab=43.79 E-value=53 Score=26.54 Aligned_cols=55 Identities=15% Similarity=0.181 Sum_probs=39.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
++|+++.++...+.+...+.++..++...++......... .+++|+++.--|++.
T Consensus 54 ~DrD~~Ai~~a~~~l~~~~~r~~~v~~~F~~l~~~l~~~~-----i~~vDGiL~DLGVSS 108 (314)
T COG0275 54 IDRDPQAIAIAKERLKEFDGRVTLVHGNFANLAEALKELG-----IGKVDGILLDLGVSS 108 (314)
T ss_pred EcCCHHHHHHHHHHhhccCCcEEEEeCcHHHHHHHHHhcC-----CCceeEEEEeccCCc
Confidence 3688888988888887778899999887665443222111 358999999998654
No 377
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=43.76 E-value=1.8e+02 Score=23.70 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=55.7
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC----------CCCC---C-CCHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----------VPAE---D-LSPNGFR 73 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~----------~~~~---~-~~~~~~~ 73 (218)
++-+.+++.+.|..+....++- +++..+.+.+.+.+. ++|++|........ -|+. . .+...+.
T Consensus 77 ~~gi~~~~~~~gy~~~l~~~~~-~~~~e~~~~~~l~~~--~vdGiIi~~~~~~~~~~~~l~~~~~P~V~i~~~~~~~~~~ 153 (333)
T COG1609 77 LKGIEEAAREAGYSLLLANTDD-DPEKEREYLETLLQK--RVDGLILLGERPNDSLLELLAAAGIPVVVIDRSPPGLGVP 153 (333)
T ss_pred HHHHHHHHHHcCCEEEEECCCC-CHHHHHHHHHHHHHc--CCCEEEEecCCCCHHHHHHHHhcCCCEEEEeCCCccCCCC
Confidence 4556677777776555555554 577777887877765 89999987721110 0110 0 0112233
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 027828 74 TVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 74 ~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
.+.--|..+...+++. +.+++ +.+|.+++...
T Consensus 154 ~V~~Dn~~~~~~a~~~----L~~~G--------~~~i~~i~~~~ 185 (333)
T COG1609 154 SVGIDNFAGAYLATEH----LIELG--------HRRIAFIGGPL 185 (333)
T ss_pred EEEEChHHHHHHHHHH----HHHCC--------CceEEEEeCCC
Confidence 4444555555555555 45666 67799998764
No 378
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=43.04 E-value=1.5e+02 Score=23.54 Aligned_cols=43 Identities=12% Similarity=0.072 Sum_probs=26.1
Q ss_pred EEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCC-CCeE
Q 027828 110 IINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTD-YAIR 153 (218)
Q Consensus 110 iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~-~gi~ 153 (218)
+|.....++..-..-...-..+|.....|++.++.+|. + +||+
T Consensus 149 ~I~~gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr-~~~~~~ 192 (268)
T PRK15116 149 LVTTGGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLK-SDFGVV 192 (268)
T ss_pred EEEECCcccCCCCCeEEEEeeecccCChHHHHHHHHHH-HhhCCC
Confidence 55554443332222222345667777889999999998 6 6774
No 379
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=42.94 E-value=1.1e+02 Score=21.06 Aligned_cols=64 Identities=14% Similarity=0.145 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHh
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 77 (218)
..+.+.+++.|.++.....=-.|++.+.+.++++.+ ..|+||.+-|.... -.+.+.+.+++..+
T Consensus 22 ~~l~~~l~~~G~~v~~~~~v~Dd~~~i~~~i~~~~~---~~DlvittGG~g~g--~~D~t~~ai~~~g~ 85 (133)
T cd00758 22 PALEALLEDLGCEVIYAGVVPDDADSIRAALIEASR---EADLVLTTGGTGVG--RRDVTPEALAELGE 85 (133)
T ss_pred HHHHHHHHHCCCEEEEeeecCCCHHHHHHHHHHHHh---cCCEEEECCCCCCC--CCcchHHHHHHhcC
Confidence 345555667777776554444567777777766654 48999998775442 24556665555443
No 380
>PRK05398 formyl-coenzyme A transferase; Provisional
Probab=42.64 E-value=1.5e+02 Score=25.12 Aligned_cols=31 Identities=16% Similarity=0.134 Sum_probs=22.9
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 23 ~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
..+.+|+.+++..+.+.+-++ .-|+||.|-.
T Consensus 68 rsi~lDLk~~eGr~~l~~Lv~----~ADVvien~r 98 (416)
T PRK05398 68 RSITLDTKTPEGKEVLEKLIR----EADVLVENFG 98 (416)
T ss_pred eEEEeeCCCHHHHHHHHHHHh----cCCEEEECCC
Confidence 457889999998666655443 4699999855
No 381
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=42.45 E-value=1.3e+02 Score=23.26 Aligned_cols=30 Identities=17% Similarity=0.154 Sum_probs=21.9
Q ss_pred hHHhHHHHHHHHHHHHhhhcCCCCeE--Eeeee
Q 027828 128 VSAAKAAVDSITRSLALEWGTDYAIR--VNGIA 158 (218)
Q Consensus 128 y~~sK~a~~~~~~~la~el~~~~gi~--v~~v~ 158 (218)
-..+|.-...+++.++.+|. +.|++ +.+|+
T Consensus 148 ~di~~t~~~pla~~~R~~Lr-k~~~~~~~~~v~ 179 (231)
T cd00755 148 ADISKTSGDPLARKVRKRLR-KRGIFFGVPVVY 179 (231)
T ss_pred ccEeccccCcHHHHHHHHHH-HcCCCCCeEEEe
Confidence 35556666889999999998 77875 55554
No 382
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=41.83 E-value=56 Score=31.27 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=33.0
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
+++.++++++++.+ .++.++++|++|.+++.++++ .+|+||++...
T Consensus 613 D~~~~~a~~la~~~----~~~~~v~lDv~D~e~L~~~v~-------~~DaVIsalP~ 658 (1042)
T PLN02819 613 SLYLKDAKETVEGI----ENAEAVQLDVSDSESLLKYVS-------QVDVVISLLPA 658 (1042)
T ss_pred CCCHHHHHHHHHhc----CCCceEEeecCCHHHHHHhhc-------CCCEEEECCCc
Confidence 45556666655543 246788999999988776655 58999998874
No 383
>COG0788 PurU Formyltetrahydrofolate hydrolase [Nucleotide transport and metabolism]
Probab=41.44 E-value=1.6e+02 Score=23.36 Aligned_cols=29 Identities=24% Similarity=0.007 Sum_probs=19.5
Q ss_pred hhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEec
Q 027828 78 IDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINIS 114 (218)
Q Consensus 78 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~is 114 (218)
+.+.-....+|-+-|.+.++- .|+||||=
T Consensus 167 ~DlvVLARYMqILS~d~~~~~--------~g~iINIH 195 (287)
T COG0788 167 ADLVVLARYMQILSPDFVERF--------PGKIINIH 195 (287)
T ss_pred CCEEeehhhHhhCCHHHHHhc--------cCcEEEec
Confidence 444445555677777777665 68999994
No 384
>PRK03525 crotonobetainyl-CoA:carnitine CoA-transferase; Provisional
Probab=41.38 E-value=1.4e+02 Score=25.24 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=23.0
Q ss_pred eEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 23 IGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 23 ~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
..+.+|+.+++..+-+.+-++ .-|+||.|--
T Consensus 67 rsi~LDLk~~~Gr~~l~~Li~----~ADVvien~r 97 (405)
T PRK03525 67 HALSLNIFKDEGREAFLKLME----TTDIFIEASK 97 (405)
T ss_pred eeEEEeCCCHHHHHHHHHHHH----hCCEEEECCC
Confidence 457899999998766655544 4699999854
No 385
>TIGR00006 S-adenosyl-methyltransferase MraW. Genetics paper in 1972 links mra cluster to peptidoglycan biosynthesis in E. coli. Seems to be common in proteobacteria.wn.
Probab=41.02 E-value=53 Score=26.58 Aligned_cols=54 Identities=9% Similarity=0.071 Sum_probs=38.5
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
++|+++.++.+.+.+...+.++.++..+.++.... +.+. ....+|+++.+-|++
T Consensus 50 iD~D~~Al~~ak~~L~~~~~R~~~i~~nF~~l~~~---l~~~--~~~~vDgIl~DLGvS 103 (305)
T TIGR00006 50 IDRDPQAIAFAKERLSDFEGRVVLIHDNFANFFEH---LDEL--LVTKIDGILVDLGVS 103 (305)
T ss_pred EcCCHHHHHHHHHHHhhcCCcEEEEeCCHHHHHHH---HHhc--CCCcccEEEEeccCC
Confidence 36788888888887776666899998888775433 2211 124799999999965
No 386
>PF00994 MoCF_biosynth: Probable molybdopterin binding domain; InterPro: IPR001453 Eukaryotic and prokaryotic molybdoenzymes require a molybdopterin cofactor (MoCF) for their activity. The biosynthesis of this cofactor involves a complex multistep enzymatic pathway. One of the eukaryotic proteins involved in this pathway is the Drosophila protein cinnamon [] which is highly similar to gephyrin, a rat microtubule-associated protein which was thought to anchor the glycine receptor to subsynaptic microtubules. Cinnamon and gephyrin are evolutionary related, in their N-terminal half, to the Escherichia coli MoCF biosynthesis proteins mog/chlG and moaB/chlA2 and, in their C-terminal half, to E. coli moeA/chlE.; GO: 0006777 Mo-molybdopterin cofactor biosynthetic process; PDB: 3TCR_B 1O8O_B 1O8Q_G 1EAV_D 1O8N_C 1UUX_A 1UUY_A 2G2C_A 2G4R_C 3K6A_F ....
Probab=39.93 E-value=1.3e+02 Score=20.97 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=46.6
Q ss_pred HHHHHHHHHhcCCCeeE--EEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHH
Q 027828 8 LRSAVAALHSLGIPAIG--LEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFI 85 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~--~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 85 (218)
..-+.+.+++.|.++.. +.-| |++.+.+.+....+ +.|+||.+.|.... -.+.+.+.+.+.....+.+.-.
T Consensus 19 ~~~l~~~l~~~G~~v~~~~~v~D--d~~~i~~~l~~~~~---~~D~VittGG~g~~--~~D~t~~a~~~~~~~~l~~~~~ 91 (144)
T PF00994_consen 19 GPFLAALLEELGIEVIRYGIVPD--DPDAIKEALRRALD---RADLVITTGGTGPG--PDDVTPEALAEAGGRELPGFEE 91 (144)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEES--SHHHHHHHHHHHHH---TTSEEEEESSSSSS--TTCHHHHHHHHHSSEE-HHHHH
T ss_pred HHHHHHHHHHcCCeeeEEEEECC--CHHHHHHHHHhhhc---cCCEEEEcCCcCcc--cCCcccHHHHHhcCcccccChH
Confidence 44566677777776653 3334 67777777755544 45999999987642 2456667777776655555444
Q ss_pred HHHHH
Q 027828 86 MCHEA 90 (218)
Q Consensus 86 l~~~~ 90 (218)
+.+.+
T Consensus 92 ~~~~~ 96 (144)
T PF00994_consen 92 LFRGV 96 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 387
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=39.69 E-value=1.1e+02 Score=25.91 Aligned_cols=48 Identities=15% Similarity=0.315 Sum_probs=35.1
Q ss_pred cHHHHHHHHHHHHhcCCCeeEE--------EecCCCHHHHHHHHHHHHHHhCCccEEE
Q 027828 4 RKTVLRSAVAALHSLGIPAIGL--------EGDVRKREDAVRVVESTINHFGKLDILV 53 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~--------~~D~s~~~~~~~~~~~~~~~~~~ld~li 53 (218)
+.+++|.+.++.++.+.++..+ -++..+++++..+++.+.++ .|++|+
T Consensus 209 tv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k--niHvI~ 264 (471)
T KOG0256|consen 209 TVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK--NIHVIS 264 (471)
T ss_pred cHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc--ceEEEe
Confidence 3567788888777777777643 36788888999888888765 666665
No 388
>PRK09620 hypothetical protein; Provisional
Probab=39.17 E-value=84 Score=24.18 Aligned_cols=54 Identities=28% Similarity=0.288 Sum_probs=30.8
Q ss_pred HHHHHHHHhcCCCeeEEEecCCC-H------------HHHHHHHHHHHHHh--CCccEEEeCCCCCCCC
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRK-R------------EDAVRVVESTINHF--GKLDILVNAAAGNFLV 62 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~-~------------~~~~~~~~~~~~~~--~~ld~li~~ag~~~~~ 62 (218)
-.+++++...|.++..+..-.+. + +...++.+.+.+.+ .++|++||.|+.....
T Consensus 33 s~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 33 RIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHhcccCCCEEEECcccccee
Confidence 45677777777777655432221 1 01123334444444 3689999999976543
No 389
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=39.03 E-value=1.7e+02 Score=22.08 Aligned_cols=142 Identities=13% Similarity=-0.015 Sum_probs=76.1
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCC
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQ 101 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ 101 (218)
+..++.|+.+++++.+.+. +.|+||..-|...... . ..+ ....+.+...++..+
T Consensus 43 ~~i~q~Difd~~~~a~~l~-------g~DaVIsA~~~~~~~~-----~---~~~--------~k~~~~li~~l~~ag--- 96 (211)
T COG2910 43 VTILQKDIFDLTSLASDLA-------GHDAVISAFGAGASDN-----D---ELH--------SKSIEALIEALKGAG--- 96 (211)
T ss_pred ceeecccccChhhhHhhhc-------CCceEEEeccCCCCCh-----h---HHH--------HHHHHHHHHHHhhcC---
Confidence 3466788888887755544 7899999888653221 1 111 111455555566655
Q ss_pred CCCCCCceEEEeccccccc--------CCc--chhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCcccCCCccCCC
Q 027828 102 ASSSSGGIIINISATLHYT--------ATW--YQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKL 171 (218)
Q Consensus 102 ~~~~~~~~iv~iss~~~~~--------~~~--~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~t~~~~~~~ 171 (218)
..|++.|+..++.. ..| +-..|..+++.. -+.+.|..+ .++.-.-++|.....|......
T Consensus 97 -----v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~a-e~L~~Lr~~----~~l~WTfvSPaa~f~PGerTg~ 166 (211)
T COG2910 97 -----VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQA-EFLDSLRAE----KSLDWTFVSPAAFFEPGERTGN 166 (211)
T ss_pred -----CeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHH-HHHHHHhhc----cCcceEEeCcHHhcCCccccCc
Confidence 68899998877543 122 223344444433 333444443 3477888888877666322211
Q ss_pred ---ChHHHHHhhhhhcCCCCCCCHHHHHHHHHHhc
Q 027828 172 ---APEEIRSKATDYMAAYKFGEKWDIAMAALYLA 203 (218)
Q Consensus 172 ---~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~ 203 (218)
..+.+ ...-.-....+.+|-|-+++-.+
T Consensus 167 yrlggD~l----l~n~~G~SrIS~aDYAiA~lDe~ 197 (211)
T COG2910 167 YRLGGDQL----LVNAKGESRISYADYAIAVLDEL 197 (211)
T ss_pred eEeccceE----EEcCCCceeeeHHHHHHHHHHHH
Confidence 11111 00001112357778887777655
No 390
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=38.56 E-value=2.1e+02 Score=23.07 Aligned_cols=70 Identities=9% Similarity=0.098 Sum_probs=43.5
Q ss_pred CCcHHHHHHHHHHHHhcC--CCeeEEEecC---CCHHHHHHHHHHHHHHh--CCccEEEeCCCCCCCCCCCCCCHHH
Q 027828 2 GRRKTVLRSAVAALHSLG--IPAIGLEGDV---RKREDAVRVVESTINHF--GKLDILVNAAAGNFLVPAEDLSPNG 71 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~--~~~~~~~~D~---s~~~~~~~~~~~~~~~~--~~ld~li~~ag~~~~~~~~~~~~~~ 71 (218)
+.+...++.+...+...+ .++..+.+=+ .-++++.+.++.+-+.. ..+|+||..=|.+....++-+..+.
T Consensus 22 s~~gAa~~D~~~~~~~r~~~~~~~~~p~~vQG~~A~~~I~~al~~~~~~~~~~~~Dviii~RGGGs~eDL~~FN~e~ 98 (319)
T PF02601_consen 22 SPTGAAIQDFLRTLKRRNPIVEIILYPASVQGEGAAASIVSALRKANEMGQADDFDVIIIIRGGGSIEDLWAFNDEE 98 (319)
T ss_pred CCchHHHHHHHHHHHHhCCCcEEEEEeccccccchHHHHHHHHHHHHhccccccccEEEEecCCCChHHhcccChHH
Confidence 455666777888887754 3555566666 33555555555554332 2699999988876655555555443
No 391
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=38.49 E-value=1.5e+02 Score=24.30 Aligned_cols=31 Identities=6% Similarity=0.194 Sum_probs=17.2
Q ss_pred eEEEecCCC--HHHHHHHHHHHHHHhCCccEEE
Q 027828 23 IGLEGDVRK--REDAVRVVESTINHFGKLDILV 53 (218)
Q Consensus 23 ~~~~~D~s~--~~~~~~~~~~~~~~~~~ld~li 53 (218)
..+..|.++ .+.+.+++.+++++++.+.++.
T Consensus 113 d~i~iD~a~gh~~~~~e~I~~ir~~~p~~~vi~ 145 (326)
T PRK05458 113 EYITIDIAHGHSDSVINMIQHIKKHLPETFVIA 145 (326)
T ss_pred CEEEEECCCCchHHHHHHHHHHHhhCCCCeEEE
Confidence 445555554 3556666666666665444444
No 392
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=38.25 E-value=1.4e+02 Score=25.60 Aligned_cols=72 Identities=18% Similarity=0.184 Sum_probs=45.7
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCeeEEEecCCCHHHHHHHHHHHHH--HhCCccEEEeCCCCCCCCCCCCCCHHHH
Q 027828 1 MGRRKTVLRSAVAALHSL--GIPAIGLEGDVRKREDAVRVVESTIN--HFGKLDILVNAAAGNFLVPAEDLSPNGF 72 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~ld~li~~ag~~~~~~~~~~~~~~~ 72 (218)
++++...++.+...+... ..++.++.+=+--.+...++++.+.. +.+.+|++|-.=|...-..+|.+..|.+
T Consensus 142 TS~tgAairDIl~~~~rR~P~~~viv~pt~VQG~~A~~eIv~aI~~an~~~~~DvlIVaRGGGSiEDLW~FNdE~v 217 (440)
T COG1570 142 TSPTGAALRDILHTLSRRFPSVEVIVYPTLVQGEGAAEEIVEAIERANQRGDVDVLIVARGGGSIEDLWAFNDEIV 217 (440)
T ss_pred cCCchHHHHHHHHHHHhhCCCCeEEEEeccccCCCcHHHHHHHHHHhhccCCCCEEEEecCcchHHHHhccChHHH
Confidence 466777788888888765 24555554444445555556555544 3356999999888766555565555543
No 393
>cd00578 L-fuc_L-ara-isomerases L-fucose isomerase (FucIase) and L-arabinose isomerase (AI) family; composed of FucIase, AI and similar proteins. FucIase converts L-fucose, an aldohexose, to its ketose form, which prepares it for aldol cleavage (similar to the isomerization of glucose in glycolysis). L-fucose (or 6-deoxy-L-galactose) is found in various oligo- and polysaccharides in mammals, bacteria and plants. AI catalyzes the isomerization of L-arabinose to L-ribulose, the first reaction in its conversion to D-xylulose-5-phosphate, an intermediate in the pentose phosphate pathway, which allows L-arabinose to be used as a carbon source. AI can also convert D-galactose to D-tagatose at elevated temperatures in the presence of divalent metal ions. D-tagatose, rarely found in nature, is of commercial interest as a low-calorie sugar substitute.
Probab=38.07 E-value=1.1e+02 Score=26.07 Aligned_cols=49 Identities=16% Similarity=0.147 Sum_probs=34.2
Q ss_pred HHHHHHHHHhcCCCeeEEEecCC-CHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
.+++.+.|++.+.+++... ++. +.++++++.+.+++. .+|++|..-+..
T Consensus 25 ~~~~~~~l~~~~~~vv~~~-~~~~~~~~~~~~~~~~~~~--~~d~ii~~~~tf 74 (452)
T cd00578 25 AREVADLLNELPVEVVDKP-EVTGTPDEARKAAEEFNEA--NCDGLIVWMHTF 74 (452)
T ss_pred HHHHHHHHhcCCceEEecC-cccCCHHHHHHHHHHHhhc--CCcEEEEccccc
Confidence 4556666665565665544 455 888999999888876 799888766643
No 394
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases.; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....
Probab=37.91 E-value=56 Score=23.60 Aligned_cols=44 Identities=18% Similarity=0.191 Sum_probs=25.3
Q ss_pred CcHHHHHHHHHHHHhcCCC-eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 3 RRKTVLRSAVAALHSLGIP-AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~-~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
.+...++.+.+-+...+.. +.++.+|+.+.-. .+++|.||.|..
T Consensus 63 i~~~a~~~a~~n~~~n~~~~v~~~~~d~~~~~~-----------~~~fD~Iv~NPP 107 (170)
T PF05175_consen 63 INPDALELAKRNAERNGLENVEVVQSDLFEALP-----------DGKFDLIVSNPP 107 (170)
T ss_dssp SBHHHHHHHHHHHHHTTCTTEEEEESSTTTTCC-----------TTCEEEEEE---
T ss_pred CCHHHHHHHHHHHHhcCcccccccccccccccc-----------ccceeEEEEccc
Confidence 4555566666666655544 7777788764211 247888888876
No 395
>cd00458 SugarP_isomerase SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway.
Probab=37.89 E-value=52 Score=23.86 Aligned_cols=37 Identities=8% Similarity=0.177 Sum_probs=27.4
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+++.+..+..+.++.....+++.+.++.+|+++...|
T Consensus 87 ~v~~~~~~~~~~~~a~~y~~~~~~~~~~~Dl~lLG~G 123 (169)
T cd00458 87 NVHYVDTSLPIEKACEKYEREILDQVDAIDLAVDGAG 123 (169)
T ss_pred HeecCCCCCCcHHHHHHHHHHHHhhCCCCCEEEECcC
Confidence 4455555666677777777777777788999999888
No 396
>TIGR03599 YloV DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.
Probab=37.23 E-value=1.8e+02 Score=25.70 Aligned_cols=52 Identities=10% Similarity=0.099 Sum_probs=41.0
Q ss_pred HHHHHHHHHhcCCCee-EEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 8 LRSAVAALHSLGIPAI-GLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~-~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
+.++.+.+...+.++. .+.++=.+.+..+.+.+.+.+.++.+++.++..|.+
T Consensus 469 ~~~ll~~l~~~~~elvTi~~G~~~~~~~~~~l~~~i~~~~~~veve~~~GgQ~ 521 (530)
T TIGR03599 469 AKKLLDKLLDEDSELITIFYGEDATEEEAEELEAFIEEKYPDVEVEIYEGGQP 521 (530)
T ss_pred HHHHHHHHhcCCCeEEEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEEECCCC
Confidence 5566666666666665 566777788889999999999999999999988854
No 397
>PRK00549 competence damage-inducible protein A; Provisional
Probab=36.78 E-value=2.6e+02 Score=23.70 Aligned_cols=76 Identities=13% Similarity=0.052 Sum_probs=46.7
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
..-+.+.+.+.|.++..+..=-.|.+.+.+.++.+ ..+.|+||.+-|... ...|.+.+.+.+.+...+...-...
T Consensus 22 ~~~L~~~L~~~G~~v~~~~~v~Dd~~~I~~~l~~a---~~~~DlVItTGGlGp--t~dD~t~ea~a~~~g~~l~~~~~~~ 96 (414)
T PRK00549 22 AQFLSEKLAELGIDVYHQTVVGDNPERLLSALEIA---EERSDLIITTGGLGP--TKDDLTKETVAKFLGRELVLDEEAL 96 (414)
T ss_pred HHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHh---ccCCCEEEECCCCCC--CCCccHHHHHHHHhCCCCcCCHHHH
Confidence 44567778888887765544444566666665543 357899999966543 2346667777776665555433333
Q ss_pred H
Q 027828 88 H 88 (218)
Q Consensus 88 ~ 88 (218)
+
T Consensus 97 ~ 97 (414)
T PRK00549 97 A 97 (414)
T ss_pred H
Confidence 3
No 398
>PF02515 CoA_transf_3: CoA-transferase family III; InterPro: IPR003673 CoA-transferases are found in organisms from all kingdoms of life. They catalyse reversible transfer reactions of coenzyme A groups from CoA-thioesters to free acids. There are at least three families of CoA-transferases, which differ in sequence and reaction mechanism: Family I consists of CoA-transferases for 3-oxoacids (2.8.3.5 from EC, 2.8.3.6 from EC), short-chain fatty acids (2.8.3.8 from EC, 2.8.3.9 from EC) and glutaconate (2.8.3.12 from EC). Most use succinyl-CoA or acetyl-CoA as CoA donors. Family II consists of the homodimeric alpha-subunits of citrate lyase and citramalate lyase (2.8.3.10 from EC, 2.8.3.11 from EC). These enzymes catalyse the transfer of acyl carrier protein (ACP) with a covalently bound CoA derivative, but can accept free CoA thioesters as well. Family III consists of formyl-CoA:oxalate CoA-transferase [], succinyl-CoA:(R)-benzylsuccinate CoA-transferase [], (E)-cinnamoyl-CoA:(R)-phenyllactate CoA-transferase [], and butyrobetainyl-CoA:(R)-carnitine CoA-transferase []. These CoA-transferases occur in prokaryotes and eukaryotes, and catalyse CoA-transfer reactions in a highly substrate- and stereo-specific manner []. This entry represents family III CoA-transferases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1PT7_B 1PT8_A 1PQY_A 1Q7E_A 1Q6Y_A 1PT5_A 1XK6_B 1XK7_C 1XVT_A 1XVU_A ....
Probab=36.37 E-value=54 Score=24.29 Aligned_cols=29 Identities=10% Similarity=0.159 Sum_probs=19.7
Q ss_pred EEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 25 LEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 25 ~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+.+|+.+++..+.+.+-++ .-|+||+|-.
T Consensus 1 V~lDl~~~~gr~~l~~L~~----~ADV~i~n~r 29 (191)
T PF02515_consen 1 VALDLKSPEGRAALRRLLA----TADVVIENFR 29 (191)
T ss_dssp EEEETTSHHHHHHHHHHHH----T-SEEEEESS
T ss_pred CEeeCcCHHHHHHHHHHHH----hCCEEEECCc
Confidence 4678888888666655554 4588888765
No 399
>PRK05086 malate dehydrogenase; Provisional
Probab=35.05 E-value=2.4e+02 Score=22.78 Aligned_cols=45 Identities=7% Similarity=0.072 Sum_probs=26.0
Q ss_pred HHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC
Q 027828 44 NHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 44 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
+.+...|+||.++|...... .+ -...+..|+. +.+.+.+.|.+.+
T Consensus 65 ~~l~~~DiVIitaG~~~~~~---~~---R~dll~~N~~----i~~~ii~~i~~~~ 109 (312)
T PRK05086 65 PALEGADVVLISAGVARKPG---MD---RSDLFNVNAG----IVKNLVEKVAKTC 109 (312)
T ss_pred HHcCCCCEEEEcCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHHHhC
Confidence 44457999999999754322 12 2334555554 4455555566554
No 400
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=34.16 E-value=97 Score=26.86 Aligned_cols=54 Identities=22% Similarity=0.103 Sum_probs=38.7
Q ss_pred HHHHHHHHHhcCCCeeEEEecCC----------CHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVR----------KREDAVRVVESTINHFGKLDILVNAAAGNFLV 62 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s----------~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~ 62 (218)
.-.+++++...|.+++.+.+.++ +-++.+++.+.+.+.++ .|++|++|++....
T Consensus 285 G~alA~aa~~~GA~VtlI~Gp~~~~~p~~v~~i~V~ta~eM~~av~~~~~-~Di~I~aAAVaDyr 348 (475)
T PRK13982 285 GFAIAAAAAAAGAEVTLISGPVDLADPQGVKVIHVESARQMLAAVEAALP-ADIAIFAAAVADWR 348 (475)
T ss_pred HHHHHHHHHHCCCcEEEEeCCcCCCCCCCceEEEecCHHHHHHHHHhhCC-CCEEEEecccccee
Confidence 45677788888988888765332 23456777777777665 79999999976543
No 401
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=34.15 E-value=1.8e+02 Score=21.01 Aligned_cols=53 Identities=15% Similarity=0.222 Sum_probs=38.0
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCC-CHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
+.+-.+++...|+..|..+..-.+-.. .++.+.++.++..++ .++++|..||.
T Consensus 10 D~~~~~~a~~~L~~~gi~~dv~V~SaHRtp~~~~~~~~~a~~~--g~~viIa~AG~ 63 (156)
T TIGR01162 10 DLPTMKKAADILEEFGIPYELRVVSAHRTPELMLEYAKEAEER--GIKVIIAGAGG 63 (156)
T ss_pred hHHHHHHHHHHHHHcCCCeEEEEECcccCHHHHHHHHHHHHHC--CCeEEEEeCCc
Confidence 344567888888887877665444444 478888888776654 57999999995
No 402
>COG0293 FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis]
Probab=33.83 E-value=1.4e+02 Score=22.66 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=26.3
Q ss_pred CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 21 PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 21 ~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
.+.++++|+++++..+.+.+.+... ++|+|++-..
T Consensus 86 ~V~~iq~d~~~~~~~~~l~~~l~~~--~~DvV~sD~a 120 (205)
T COG0293 86 GVIFLQGDITDEDTLEKLLEALGGA--PVDVVLSDMA 120 (205)
T ss_pred CceEEeeeccCccHHHHHHHHcCCC--CcceEEecCC
Confidence 4788999999999888877766432 4798886544
No 403
>PF11599 AviRa: RRNA methyltransferase AviRa; InterPro: IPR024268 This family of proteins includes the methyltransferase AviRa from Streptomyces viridochromogenes. This protein mediates the resistance to the antibiotic avilamycin. AviRa methylates a specific guanine base within the peptidyl-transferase loop of the 23S ribosomal RNA [].; PDB: 1O9H_A 1O9G_A.
Probab=33.25 E-value=2.3e+02 Score=21.94 Aligned_cols=54 Identities=13% Similarity=-0.019 Sum_probs=28.4
Q ss_pred HHHHHHHHHhcCC--CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCC
Q 027828 8 LRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66 (218)
Q Consensus 8 l~~~~~~l~~~~~--~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~ 66 (218)
..++.+.+...|. .....+.|++++.....+.. ...+|+||.-........|..
T Consensus 131 A~RL~~~l~~~g~~~p~~~~~aDvf~~~~~~~~~~-----~~~~diViTDlPYG~~t~W~g 186 (246)
T PF11599_consen 131 ADRLRERLAAEGGDEPHAIFRADVFDPSPLAVLDA-----GFTPDIVITDLPYGEMTSWQG 186 (246)
T ss_dssp HHHHHHHHHHTTSS--EEEEE--TT-HHHHHHHHT-----T---SEEEEE--CCCSSSTTS
T ss_pred HHHHHHHHHhcCCCCchhheeecccCCchhhhhcc-----CCCCCEEEecCCCcccccccC
Confidence 3444555555543 34577899999988766522 225799998877766555554
No 404
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=32.97 E-value=2.8e+02 Score=22.92 Aligned_cols=53 Identities=13% Similarity=0.025 Sum_probs=34.8
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCC--HHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRK--REDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~--~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+.+..+++.+.+.. ...+.++..|+++ .+.+.+++.+++++++.++++.=|.+
T Consensus 106 ~~~d~er~~~L~~~-~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~ 160 (346)
T PRK05096 106 SDADFEKTKQILAL-SPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVV 160 (346)
T ss_pred CHHHHHHHHHHHhc-CCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEeccc
Confidence 44555665554442 2335566777775 66677788888888888887766665
No 405
>COG0521 MoaB Molybdopterin biosynthesis enzymes [Coenzyme metabolism]
Probab=32.85 E-value=2e+02 Score=21.11 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHH
Q 027828 7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIM 86 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 86 (218)
..+-+.+.|.+.|.++..+..=--+.+.+++.+..+... .+|+++.+-|.... ..+.++|..+..++--+-|.-.+
T Consensus 28 sG~~l~~~L~~ag~~~~~~~iV~D~~~~I~~~l~~~~~~--~~DvvlttGGTG~t--~RDvTpEA~~~~~dKeipGFgE~ 103 (169)
T COG0521 28 SGPLLVELLEEAGHNVAAYTIVPDDKEQIRATLIALIDE--DVDVVLTTGGTGIT--PRDVTPEATRPLFDKEIPGFGEL 103 (169)
T ss_pred chhHHHHHHHHcCCccceEEEeCCCHHHHHHHHHHHhcC--CCCEEEEcCCccCC--CCcCCHHHHHHHHhccCCcHHHH
Confidence 345567777777766633333333445555555544433 29999999986542 24788999999999888887777
Q ss_pred HHHHH
Q 027828 87 CHEAL 91 (218)
Q Consensus 87 ~~~~~ 91 (218)
.|..-
T Consensus 104 fR~~S 108 (169)
T COG0521 104 FRRLS 108 (169)
T ss_pred HHHhh
Confidence 76553
No 406
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=32.25 E-value=83 Score=21.92 Aligned_cols=14 Identities=14% Similarity=0.427 Sum_probs=10.9
Q ss_pred CCccEEEeCCCCCC
Q 027828 47 GKLDILVNAAAGNF 60 (218)
Q Consensus 47 ~~ld~li~~ag~~~ 60 (218)
...|+||++.+...
T Consensus 80 ~~~Dvvi~~~~~~~ 93 (155)
T cd01065 80 AEADLIINTTPVGM 93 (155)
T ss_pred ccCCEEEeCcCCCC
Confidence 57899999988543
No 407
>PF04472 DUF552: Protein of unknown function (DUF552); InterPro: IPR007561 This entry represents a cell division protein, designated SepF, which is conserved in Gram-positive bacteria. SepF accumulates at the cell division site in an FtsZ-dependent manner and is required for proper septum formation []. Mutants are viable but the formation of the septum is much slower and occurs with a very abnormal morphology. This entry also includes archaeal related proteins of unknown function.; GO: 0000917 barrier septum formation; PDB: 3P04_A.
Probab=32.19 E-value=1.1e+02 Score=18.56 Aligned_cols=45 Identities=20% Similarity=0.104 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCcc
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLD 50 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld 50 (218)
+-+.++++.+.+++ ++...+..+-.+.+..+++++.+....-.++
T Consensus 8 ~~~D~~~i~~~l~~--g~~Vivnl~~l~~~~~~Ri~Dfl~G~~~al~ 52 (73)
T PF04472_consen 8 SFEDAREIVDALRE--GKIVIVNLENLDDEEAQRILDFLSGAVYALD 52 (73)
T ss_dssp SGGGHHHHHHHHHT--T--EEEE-TTS-HHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHc--CCEEEEECCCCCHHHHHHHHHHHhchheeeC
Confidence 34566778888876 3566777777778888888888876443343
No 408
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=32.15 E-value=62 Score=22.49 Aligned_cols=49 Identities=10% Similarity=-0.065 Sum_probs=29.9
Q ss_pred HHHHHHHHhcCCCeeEEE-ecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 9 RSAVAALHSLGIPAIGLE-GDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~-~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
++.++...+.+.++..+. .+-+..+.+..+++.++++.. -++.|...|.
T Consensus 43 e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~-~~i~vivGG~ 92 (132)
T TIGR00640 43 EEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGR-PDILVVVGGV 92 (132)
T ss_pred HHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCC-CCCEEEEeCC
Confidence 455555666666777665 344567778888888777632 2555555553
No 409
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=32.08 E-value=1.7e+02 Score=20.06 Aligned_cols=63 Identities=13% Similarity=0.247 Sum_probs=39.9
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~ 76 (218)
..+.+.+++.|.++.....=--|.+.+.+.++++.+ ..|+||..-|... .-.+.+.+.+.+..
T Consensus 21 ~~l~~~l~~~G~~~~~~~~v~Dd~~~I~~~l~~~~~---~~dliittGG~g~--g~~D~t~~~l~~~~ 83 (135)
T smart00852 21 PALAELLTELGIEVTRYVIVPDDKEAIKEALREALE---RADLVITTGGTGP--GPDDVTPEAVAEAL 83 (135)
T ss_pred HHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHHHh---CCCEEEEcCCCCC--CCCcCcHHHHHHHh
Confidence 455666777787765544433566777766666543 5899998877553 23466677666554
No 410
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional
Probab=31.73 E-value=2.6e+02 Score=22.35 Aligned_cols=45 Identities=16% Similarity=0.085 Sum_probs=25.3
Q ss_pred HHHHHHHHHhcCCCeeE-----EEe---cCCCHHHHHHHHHHHHHHhCCccEEEe
Q 027828 8 LRSAVAALHSLGIPAIG-----LEG---DVRKREDAVRVVESTINHFGKLDILVN 54 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~-----~~~---D~s~~~~~~~~~~~~~~~~~~ld~li~ 54 (218)
++++++..++.|..+.. +.| .-++++.+.++++.+.+. ++|.|..
T Consensus 122 ~~~~v~~ak~~g~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--G~d~i~l 174 (287)
T PRK05692 122 FEPVAEAAKQAGVRVRGYVSCVLGCPYEGEVPPEAVADVAERLFAL--GCYEISL 174 (287)
T ss_pred HHHHHHHHHHcCCEEEEEEEEEecCCCCCCCCHHHHHHHHHHHHHc--CCcEEEe
Confidence 45555555666665542 111 134677777777777654 4565443
No 411
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=31.21 E-value=2.5e+02 Score=21.81 Aligned_cols=10 Identities=30% Similarity=0.514 Sum_probs=7.6
Q ss_pred CceEEEeccc
Q 027828 107 GGIIINISAT 116 (218)
Q Consensus 107 ~~~iv~iss~ 116 (218)
.|++|.+++.
T Consensus 236 ~g~~v~~~~~ 245 (325)
T cd08253 236 GGRIVVYGSG 245 (325)
T ss_pred CCEEEEEeec
Confidence 5889988763
No 412
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=31.13 E-value=1.8e+02 Score=22.98 Aligned_cols=45 Identities=13% Similarity=0.170 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA 55 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ 55 (218)
+.+++.++++++.+..+.++-.-.....+ .++.+++..+|+||..
T Consensus 169 ~~~~~~v~~lr~~~~D~II~l~H~G~~~d-----~~la~~~~giD~Iigg 213 (281)
T cd07409 169 EAAQKEADKLKAQGVNKIIALSHSGYEVD-----KEIARKVPGVDVIVGG 213 (281)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeccCchhH-----HHHHHcCCCCcEEEeC
Confidence 34666777777767777666555554443 1334455778888843
No 413
>PRK00050 16S rRNA m(4)C1402 methyltranserfase; Provisional
Probab=30.96 E-value=1.1e+02 Score=24.73 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=36.4
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
+++.+.++.+.+.+.+ ..++.++..|..+.... ... ..+.+|+++..-|+..
T Consensus 51 D~D~~al~~ak~~L~~-~~ri~~i~~~f~~l~~~---l~~---~~~~vDgIl~DLGvSs 102 (296)
T PRK00050 51 DRDPDAIAAAKDRLKP-FGRFTLVHGNFSNLKEV---LAE---GLGKVDGILLDLGVSS 102 (296)
T ss_pred cCCHHHHHHHHHhhcc-CCcEEEEeCCHHHHHHH---HHc---CCCccCEEEECCCccc
Confidence 5778888888777765 55788888888775432 221 2237999999999653
No 414
>PRK14966 unknown domain/N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase fusion protein; Provisional
Probab=30.68 E-value=3.4e+02 Score=23.24 Aligned_cols=49 Identities=20% Similarity=0.085 Sum_probs=31.9
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
.+++.++.+.+.+...+.++.++.+|+.+... ...+++|++|.|.....
T Consensus 283 iS~~ALe~AreNa~~~g~rV~fi~gDl~e~~l---------~~~~~FDLIVSNPPYI~ 331 (423)
T PRK14966 283 ISPPALETARKNAADLGARVEFAHGSWFDTDM---------PSEGKWDIIVSNPPYIE 331 (423)
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEcchhcccc---------ccCCCccEEEECCCCCC
Confidence 45566666666666556678888888754310 01136999999997654
No 415
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=30.58 E-value=1.6e+02 Score=19.39 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=10.3
Q ss_pred CCeeEEEe-cCCCHHHHHHHHHHHHH
Q 027828 20 IPAIGLEG-DVRKREDAVRVVESTIN 44 (218)
Q Consensus 20 ~~~~~~~~-D~s~~~~~~~~~~~~~~ 44 (218)
.++..+.+ -..+.....++++.+++
T Consensus 52 pd~V~iS~~~~~~~~~~~~l~~~~k~ 77 (121)
T PF02310_consen 52 PDVVGISVSMTPNLPEAKRLARAIKE 77 (121)
T ss_dssp CSEEEEEESSSTHHHHHHHHHHHHHT
T ss_pred CcEEEEEccCcCcHHHHHHHHHHHHh
Confidence 34444444 33334444444444333
No 416
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=30.54 E-value=1.4e+02 Score=24.37 Aligned_cols=79 Identities=11% Similarity=0.056 Sum_probs=44.1
Q ss_pred eeEEEecCCCHHHHH-H-H--HHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc
Q 027828 22 AIGLEGDVRKREDAV-R-V--VESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKG 97 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~-~-~--~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 97 (218)
......|+.+..... . . .....+.+...|++|+.||..... . +.+...+..| ..+.+.+.+.+.+.
T Consensus 45 a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~---~---~tr~~ll~~N----~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 45 LEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKE---G---MERRDLLSKN----VKIFKEQGRALDKL 114 (324)
T ss_pred cceeEeehhcccchhcCceeccCChHHHhCCCCEEEEcCCCCCCC---C---CcHHHHHHHH----HHHHHHHHHHHHhh
Confidence 445666777665211 0 0 002234556899999999975431 1 2244555555 45666666766665
Q ss_pred -CCCCCCCCCCceEEEecccc
Q 027828 98 -GRGQASSSSGGIIINISATL 117 (218)
Q Consensus 98 -~~~~~~~~~~~~iv~iss~~ 117 (218)
.. .+.+|.+|-..
T Consensus 115 ~~~-------~~iiivvsNPv 128 (324)
T TIGR01758 115 AKK-------DCKVLVVGNPA 128 (324)
T ss_pred CCC-------CeEEEEeCCcH
Confidence 22 56777776433
No 417
>COG0513 SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]
Probab=30.27 E-value=2.2e+02 Score=24.94 Aligned_cols=52 Identities=27% Similarity=0.386 Sum_probs=39.6
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 56 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~a 56 (218)
+|+....+++...+...|.++..+++|++..+- .+.++.++ -|.++++|..-
T Consensus 280 ~~tk~~~~~l~~~l~~~g~~~~~lhG~l~q~~R-~~~l~~F~--~g~~~vLVaTD 331 (513)
T COG0513 280 VRTKRLVEELAESLRKRGFKVAALHGDLPQEER-DRALEKFK--DGELRVLVATD 331 (513)
T ss_pred eCcHHHHHHHHHHHHHCCCeEEEecCCCCHHHH-HHHHHHHH--cCCCCEEEEec
Confidence 466777888999999999899999999996554 55555565 36888888643
No 418
>PRK03673 hypothetical protein; Provisional
Probab=29.90 E-value=3.4e+02 Score=22.94 Aligned_cols=70 Identities=14% Similarity=0.041 Sum_probs=43.3
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
..-+.+.+.+.|.++..+..=--|++.+.+.++.. ..+.|+||.+-|..+. -.+.+.+..-+.+...+.-
T Consensus 23 ~~~la~~L~~~G~~v~~~~~v~D~~~~i~~~l~~a---~~~~DlVI~tGGlGpt--~dD~t~~avA~a~g~~L~~ 92 (396)
T PRK03673 23 AAWLADFFFHQGLPLSRRNTVGDNLDALVAILRER---SQHADVLIVNGGLGPT--SDDLSALAAATAAGEGLVL 92 (396)
T ss_pred HHHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHH---hccCCEEEEcCCCCCC--CcccHHHHHHHHcCCCcee
Confidence 44567778888877665544444566666665554 4578999999986542 2345555555555554444
No 419
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=29.44 E-value=1.1e+02 Score=21.51 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=33.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
+||+....+.++..|.+.|..+ ..|+-... ++++.+. .-|++|...|..
T Consensus 34 vGrs~~vG~pla~lL~~~gatV--~~~~~~t~-~l~~~v~-------~ADIVvsAtg~~ 82 (140)
T cd05212 34 VGRSGIVGAPLQCLLQRDGATV--YSCDWKTI-QLQSKVH-------DADVVVVGSPKP 82 (140)
T ss_pred ECCCchHHHHHHHHHHHCCCEE--EEeCCCCc-CHHHHHh-------hCCEEEEecCCC
Confidence 4788999999999998876444 45553332 2333322 469999999964
No 420
>cd03522 MoeA_like MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.
Probab=29.07 E-value=3.1e+02 Score=22.35 Aligned_cols=60 Identities=13% Similarity=0.231 Sum_probs=37.5
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHH
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFR 73 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~ 73 (218)
-+.+.+++.|.++.....=-.|.+.+.+.+..+.++ ..|+||.+.|.... -.+.+++.+.
T Consensus 183 ~l~~~L~~~G~~v~~~~iv~Dd~~~I~~ai~~~~~~--g~DlIItTGGtsvg--~~D~tp~Ai~ 242 (312)
T cd03522 183 VLRARLAALGVELVEQVIVPHDEAAIAAAIAEALEA--GAELLILTGGASVD--PDDVTPAAIR 242 (312)
T ss_pred HHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHHhcC--CCCEEEEeCCcccC--CcchHHHHHH
Confidence 455666777877765554455677777777666543 47999999886542 2344444433
No 421
>PRK11783 rlmL 23S rRNA m(2)G2445 methyltransferase; Provisional
Probab=28.99 E-value=4.6e+02 Score=24.09 Aligned_cols=50 Identities=12% Similarity=0.059 Sum_probs=31.9
Q ss_pred CCcHHHHHHHHHHHHhcCC---CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 2 GRRKTVLRSAVAALHSLGI---PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~---~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
+.++..++.+.+-+...+. ++.++.+|+.+. +... .+++|+||.+.....
T Consensus 568 D~s~~al~~a~~N~~~ng~~~~~v~~i~~D~~~~------l~~~---~~~fDlIilDPP~f~ 620 (702)
T PRK11783 568 DMSNTYLEWAERNFALNGLSGRQHRLIQADCLAW------LKEA---REQFDLIFIDPPTFS 620 (702)
T ss_pred eCCHHHHHHHHHHHHHhCCCccceEEEEccHHHH------HHHc---CCCcCEEEECCCCCC
Confidence 3566677777776665443 578888887431 1111 247999999987544
No 422
>cd01540 PBP1_arabinose_binding Periplasmic L-arabinose-binding protein (ABP), a member of a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Periplasmic L-arabinose-binding protein (ABP), a member of a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. ABP is only involved in transport contrary to other related sugar-binding proteins such as the glucose/galactose-binding protein (GGBP) and the ribose-binding protein (RBP), both of which are involved in chemotaxis as well as transport. The periplasmic ABP consists of two alpha/beta globular domains connected by a three-stranded hinge, a Venus flytrap-like domain, which undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, ABP is homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR) and DNA-binding transcriptional repressors such a
Probab=28.87 E-value=2.2e+02 Score=22.02 Aligned_cols=44 Identities=11% Similarity=0.103 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 56 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~a 56 (218)
+.+.+.+++.|.++..+..+ +.+...+.++.+.. .++|++|.++
T Consensus 19 ~gi~~~~~~~g~~~~~~~~~--~~~~~~~~i~~~~~--~~~dgiii~~ 62 (289)
T cd01540 19 KFAKKAAKEKGFTVVKIDVP--DGEKVLSAIDNLGA--QGAKGFVICV 62 (289)
T ss_pred HHHHHHHHHcCCEEEEccCC--CHHHHHHHHHHHHH--cCCCEEEEcc
Confidence 34455555566565555444 55555556666655 3789888765
No 423
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=28.84 E-value=4e+02 Score=23.41 Aligned_cols=14 Identities=21% Similarity=0.197 Sum_probs=11.6
Q ss_pred CCccEEEeCCCCCC
Q 027828 47 GKLDILVNAAAGNF 60 (218)
Q Consensus 47 ~~ld~li~~ag~~~ 60 (218)
+..|++|.++|...
T Consensus 247 ~gaDVVIetag~pg 260 (509)
T PRK09424 247 KEVDIIITTALIPG 260 (509)
T ss_pred CCCCEEEECCCCCc
Confidence 57999999999754
No 424
>TIGR00200 cinA_nterm competence/damage-inducible protein CinA N-terminal domain. cinA is a DNA damage- or competence-inducible protein that is polycistronic with recA in a number of species
Probab=28.84 E-value=3.7e+02 Score=22.91 Aligned_cols=70 Identities=14% Similarity=0.072 Sum_probs=43.4
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhh
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVG 82 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 82 (218)
..-+.+.+.+.|.++..+..=-.|.+.+.+.+..+. .+.|+||.+-|... ...|.+.+.+.+.+...+.-
T Consensus 22 ~~~l~~~L~~~G~~v~~~~~v~Dd~~~i~~~l~~a~---~~~DlVIttGGlgp--t~dD~t~eava~~~g~~l~~ 91 (413)
T TIGR00200 22 AQWLADFLAHQGLPLSRRTTVGDNPERLKTIIRIAS---ERADVLIFNGGLGP--TSDDLTAETIATAKGEPLVL 91 (413)
T ss_pred HHHHHHHHHHCCCeEEEEEEeCCCHHHHHHHHHHHh---cCCCEEEEcCCCCC--CCcccHHHHHHHHhCCCcEE
Confidence 345666777788877665544455666666665543 57899999866543 22456666665555544444
No 425
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=28.58 E-value=3.1e+02 Score=22.32 Aligned_cols=58 Identities=10% Similarity=0.049 Sum_probs=35.8
Q ss_pred HHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEeccc
Q 027828 42 TINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISAT 116 (218)
Q Consensus 42 ~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~iv~iss~ 116 (218)
..+.+...|++|+.||..... ..+.. ..++. ...+.+.+.+.+.+.. . .+.+|.+|-.
T Consensus 70 ~~~~~~~aDiVVitAG~~~~~---g~tR~---dll~~----N~~i~~~i~~~i~~~~~~-------~~iiivvsNP 128 (323)
T cd00704 70 PEEAFKDVDVAILVGAFPRKP---GMERA---DLLRK----NAKIFKEQGEALNKVAKP-------TVKVLVVGNP 128 (323)
T ss_pred hHHHhCCCCEEEEeCCCCCCc---CCcHH---HHHHH----hHHHHHHHHHHHHHhCCC-------CeEEEEeCCc
Confidence 345556899999999975432 22332 23333 4566777777777762 3 5777777643
No 426
>TIGR03439 methyl_EasF probable methyltransferase domain, EasF family. This model represents an uncharacterized domain of about 300 amino acids with homology to S-adenosylmethionine-dependent methyltransferases. Proteins with this domain are exclusively fungal. A few, such as EasF from Neotyphodium lolii, are associated with the biosynthesis of ergot alkaloids, a class of fungal secondary metabolites. EasF may, in fact, be the AdoMet:dimethylallyltryptophan N-methyltransferase, the enzyme that follows tryptophan dimethylallyltransferase (DMATS) in ergot alkaloid biosynthesis. Several other members of this family, including mug158 (meiotically up-regulated gene 158 protein) from Schizosaccharomyces pombe, contain an additional uncharacterized domain DUF323 (pfam03781).
Probab=28.51 E-value=1.8e+02 Score=23.67 Aligned_cols=47 Identities=13% Similarity=0.070 Sum_probs=32.7
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHH-HHhCCccE
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI-NHFGKLDI 51 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~-~~~~~ld~ 51 (218)
+..|...+.+.+...+..+.++.+|++. +.++...+.+. +.++.+.+
T Consensus 87 ~~~Kt~~LL~aL~~~~~~~~Y~plDIS~-~~L~~a~~~L~~~~~p~l~v 134 (319)
T TIGR03439 87 NLRKVGILLEALERQKKSVDYYALDVSR-SELQRTLAELPLGNFSHVRC 134 (319)
T ss_pred chHHHHHHHHHHHhcCCCceEEEEECCH-HHHHHHHHhhhhccCCCeEE
Confidence 4455666677776656678899999994 45677778787 56665554
No 427
>TIGR03534 RF_mod_PrmC protein-(glutamine-N5) methyltransferase, release factor-specific. Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3.
Probab=28.30 E-value=2.7e+02 Score=21.15 Aligned_cols=46 Identities=22% Similarity=0.134 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHHhcCC-CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 4 RKTVLRSAVAALHSLGI-PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
+...++.+.+.+...+. ++.++.+|+.+.- ..+++|+|+.|.....
T Consensus 120 ~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~-----------~~~~fD~Vi~npPy~~ 166 (251)
T TIGR03534 120 SPEALAVARKNAARLGLDNVTFLQSDWFEPL-----------PGGKFDLIVSNPPYIP 166 (251)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECchhccC-----------cCCceeEEEECCCCCc
Confidence 44455555555544443 4677777765421 1247999999987654
No 428
>PF08883 DOPA_dioxygen: Dopa 4,5-dioxygenase family; InterPro: IPR014980 This family of proteins is related to P87064 from SWISSPROT a DOPA 4,5-dioxygenase that is involved in synthesis of betalain. DOPA-dioxygenase is the key enzyme involved in betalain biosynthesis. It converts 3,4-dihydroxyphenylalanine to betalamic acid, a yellow chromophore. ; PDB: 2NYH_A 2P8I_C.
Probab=27.52 E-value=1.2e+02 Score=20.22 Aligned_cols=31 Identities=26% Similarity=0.320 Sum_probs=23.3
Q ss_pred EEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 027828 24 GLEGDVRKREDAVRVVESTINHFGKLDILVNA 55 (218)
Q Consensus 24 ~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ 55 (218)
-++.++ .++...+++..+...-|+++++||-
T Consensus 47 ~~ev~f-~~~~f~~~v~Wl~~nrg~LsVLiHP 77 (104)
T PF08883_consen 47 SFEVDF-PPEQFAEVVPWLMLNRGGLSVLIHP 77 (104)
T ss_dssp EEEEEE--HHHHHHHHHHHHHH-TT--EEEEE
T ss_pred eEEEEc-CHHHHHHHHHHHHHhCCCceEEEcC
Confidence 367888 7899999999999888999999983
No 429
>PF10339 Vel1p: Yeast-specific zinc responsive; InterPro: IPR019435 This entry represents putative velum formation proteins found in fungi. They are of unknown function but are highly induced in zinc-depleted conditions and have increased expression in NAP1 deletion mutants [].
Probab=27.14 E-value=1.2e+02 Score=22.08 Aligned_cols=55 Identities=15% Similarity=0.156 Sum_probs=34.4
Q ss_pred CceEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCccc
Q 027828 107 GGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 107 ~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~v~ 163 (218)
+..|=++........+..|..-++--+.+.+++.+|-.. ..+||.|....||+..
T Consensus 112 ~amiPfvNTVT~Ei~ydsWA~ta~Nas~itGlanQl~na--t~YgvQVA~C~pgf~s 166 (203)
T PF10339_consen 112 DAMIPFVNTVTNEISYDSWAYTAMNASRITGLANQLMNA--TDYGVQVATCYPGFAS 166 (203)
T ss_pred cccceeeecccceEeechHHhhhhhhhhhhhhHHHHhcc--cccceEEEEecCchhh
Confidence 334444444445556666665555555666666655332 3789999999999763
No 430
>KOG3420 consensus Predicted RNA methylase [Translation, ribosomal structure and biogenesis]
Probab=27.12 E-value=2.5e+02 Score=20.35 Aligned_cols=62 Identities=11% Similarity=-0.037 Sum_probs=37.3
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHh
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIE 77 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 77 (218)
+.+.|+-...-..+...++..++||+.+++... +.+|..|.|..+..... ..+++-....++
T Consensus 80 dpeALEIf~rNaeEfEvqidlLqcdildle~~~----------g~fDtaviNppFGTk~~--~aDm~fv~~al~ 141 (185)
T KOG3420|consen 80 DPEALEIFTRNAEEFEVQIDLLQCDILDLELKG----------GIFDTAVINPPFGTKKK--GADMEFVSAALK 141 (185)
T ss_pred CHHHHHHHhhchHHhhhhhheeeeeccchhccC----------CeEeeEEecCCCCcccc--cccHHHHHHHHH
Confidence 344554443333333346678899999877532 57899999988765433 355555554444
No 431
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=27.10 E-value=3e+02 Score=21.41 Aligned_cols=17 Identities=12% Similarity=-0.005 Sum_probs=9.1
Q ss_pred hHhHHhHHHHHHHHHHH
Q 027828 126 IHVSAAKAAVDSITRSL 142 (218)
Q Consensus 126 ~~y~~sK~a~~~~~~~l 142 (218)
..--+-|..++-+.|-+
T Consensus 203 AP~w~~~~gLEWlyRl~ 219 (243)
T PRK03692 203 APKIWQNLGLEWLYRLL 219 (243)
T ss_pred CcHHHHHhChHHHHHhH
Confidence 33455566666655544
No 432
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=27.05 E-value=1.8e+02 Score=23.67 Aligned_cols=58 Identities=10% Similarity=0.127 Sum_probs=34.0
Q ss_pred HHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CCCCCCCCCceEEEecccc
Q 027828 43 INHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG-RGQASSSSGGIIINISATL 117 (218)
Q Consensus 43 ~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~iv~iss~~ 117 (218)
.+.+...|+||+.||..... ..+. ...++.| ..+.+.+.+.+.+.. . ++.+|.+|...
T Consensus 73 ~~~l~~aDiVI~tAG~~~~~---~~~R---~~l~~~N----~~i~~~i~~~i~~~~~~-------~~iiivvsNPv 131 (325)
T cd01336 73 EEAFKDVDVAILVGAMPRKE---GMER---KDLLKAN----VKIFKEQGEALDKYAKK-------NVKVLVVGNPA 131 (325)
T ss_pred HHHhCCCCEEEEeCCcCCCC---CCCH---HHHHHHH----HHHHHHHHHHHHHhCCC-------CeEEEEecCcH
Confidence 34456899999999976432 2222 3344444 445566666666552 1 46677777533
No 433
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=26.91 E-value=1.6e+02 Score=21.04 Aligned_cols=53 Identities=17% Similarity=0.192 Sum_probs=34.4
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecCC-CHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
|.+-.+++.+.|++.|..+....+-.. .++.+.+++++... ...+++|..||.
T Consensus 12 D~~~~~~a~~~L~~~gi~~~~~V~saHR~p~~l~~~~~~~~~--~~~~viIa~AG~ 65 (150)
T PF00731_consen 12 DLPIAEEAAKTLEEFGIPYEVRVASAHRTPERLLEFVKEYEA--RGADVIIAVAGM 65 (150)
T ss_dssp GHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHHHHHHHTTT--TTESEEEEEEES
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHhcc--CCCEEEEEECCC
Confidence 455678888888887754443333333 46667777666544 368999999995
No 434
>PF01205 UPF0029: Uncharacterized protein family UPF0029; InterPro: IPR001498 The Impact protein is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. This entry represents the N-terminal domain of the Impact proteins.; PDB: 1VI7_A 2CVE_A.
Probab=26.29 E-value=1.9e+02 Score=19.44 Aligned_cols=35 Identities=17% Similarity=0.068 Sum_probs=26.6
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEe
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVN 54 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~ 54 (218)
+++..+.+-+.+.++++.+++.++.++..-.+.++
T Consensus 4 S~Fia~~~~v~s~~~~~~~l~~l~~~~~~AtH~~~ 38 (110)
T PF01205_consen 4 SKFIAHAAPVESEEEAEEFLEELKKEHKKATHNCY 38 (110)
T ss_dssp EEEEEEEEE-SCHHHHHHHHHHHHHH-TTSSEEEE
T ss_pred CEEEEEEEEcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 45677889999999999999999998876555433
No 435
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropy
Probab=26.24 E-value=3.3e+02 Score=21.55 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=23.5
Q ss_pred HHHHHHHHHhcCCCeeE-----EEe---cCCCHHHHHHHHHHHHHHhCCccEEEe
Q 027828 8 LRSAVAALHSLGIPAIG-----LEG---DVRKREDAVRVVESTINHFGKLDILVN 54 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~-----~~~---D~s~~~~~~~~~~~~~~~~~~ld~li~ 54 (218)
..+..+..++.|..+.. +.| +-.+++.+.++++.+.+. +.|.|..
T Consensus 116 ~~~~v~~ak~~G~~v~~~i~~~f~~~~~~~~~~~~~~~~~~~~~~~--Ga~~i~l 168 (274)
T cd07938 116 FEPVAELAKAAGLRVRGYVSTAFGCPYEGEVPPERVAEVAERLLDL--GCDEISL 168 (274)
T ss_pred HHHHHHHHHHCCCeEEEEEEeEecCCCCCCCCHHHHHHHHHHHHHc--CCCEEEE
Confidence 44445555566665542 222 133566666766666553 4565544
No 436
>PF09670 Cas_Cas02710: CRISPR-associated protein (Cas_Cas02710)
Probab=26.09 E-value=3.5e+02 Score=22.62 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHh---CCccEEEeCCCC
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHF---GKLDILVNAAAG 58 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~---~~ld~li~~ag~ 58 (218)
....+++.+.+.........+..|..|+.++-+.+.++.+.. +.-+++|.-.|.
T Consensus 24 ~~~~~~i~~~l~~~~~~~~~~~~d~dD~~~~y~~l~~~l~~~~~~~~~~v~vDiTGG 80 (379)
T PF09670_consen 24 KPKAEQIRQQLGLSPDQEEIVIVDPDDPLECYRKLREVLEKLRDFPGHEVAVDITGG 80 (379)
T ss_pred hhhHHHHHHHHhcccCCceEeeCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEECCCC
Confidence 344666777666555456677888888888888877777766 556788877774
No 437
>cd01545 PBP1_SalR Ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor SalR, a member of the LacI-GalR family of bacterial transcription regulators. The SalR binds to glucose based compound Salicin which is chemically related to aspirin. The ligand-binding of SalR is structurally homologous to the periplasmic sugar-binding domain of ABC-transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand bind
Probab=26.00 E-value=2.7e+02 Score=21.04 Aligned_cols=47 Identities=17% Similarity=0.076 Sum_probs=28.9
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+.+.+.+++.|.++..+..|-.+.+....+.+.+.+. ++|++|....
T Consensus 19 ~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~--~vdgiii~~~ 65 (270)
T cd01545 19 LGALDACRDTGYQLVIEPCDSGSPDLAERVRALLQRS--RVDGVILTPP 65 (270)
T ss_pred HHHHHHHHhCCCeEEEEeCCCCchHHHHHHHHHHHHC--CCCEEEEeCC
Confidence 3445555666767766666655544555565555443 7898887654
No 438
>KOG1099 consensus SAM-dependent methyltransferase/cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=25.98 E-value=2e+02 Score=22.51 Aligned_cols=42 Identities=24% Similarity=0.298 Sum_probs=26.9
Q ss_pred eeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCC
Q 027828 22 AIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAED 66 (218)
Q Consensus 22 ~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~ 66 (218)
+..+++|+++....+.+++.+-. .+-|+||+ -|.+....+++
T Consensus 91 V~qlq~DIT~~stae~Ii~hfgg--ekAdlVvc-DGAPDvTGlHd 132 (294)
T KOG1099|consen 91 VIQLQGDITSASTAEAIIEHFGG--EKADLVVC-DGAPDVTGLHD 132 (294)
T ss_pred eEEeecccCCHhHHHHHHHHhCC--CCccEEEe-CCCCCcccccc
Confidence 56679999999887776665432 16777766 45444444444
No 439
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=25.82 E-value=3e+02 Score=20.95 Aligned_cols=91 Identities=16% Similarity=0.005 Sum_probs=53.7
Q ss_pred CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCC
Q 027828 20 IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGR 99 (218)
Q Consensus 20 ~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 99 (218)
..+.+...|+.++.++...+. +++.+++..+... .... .............+... .+
T Consensus 42 ~~v~~~~~d~~~~~~l~~a~~-------G~~~~~~i~~~~~-~~~~---------~~~~~~~~~~~~a~~a~-----~~- 98 (275)
T COG0702 42 GGVEVVLGDLRDPKSLVAGAK-------GVDGVLLISGLLD-GSDA---------FRAVQVTAVVRAAEAAG-----AG- 98 (275)
T ss_pred CCcEEEEeccCCHhHHHHHhc-------cccEEEEEecccc-cccc---------hhHHHHHHHHHHHHHhc-----CC-
Confidence 457788999999998877766 6788888777543 2111 11111222233333222 11
Q ss_pred CCCCCCCCceEEEecccccccCCcchhHhHHhHHHHHHHHHHH
Q 027828 100 GQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 142 (218)
Q Consensus 100 ~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~l 142 (218)
..+++.+|...+.. .....|..+|...+...+..
T Consensus 99 -------~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~~s 132 (275)
T COG0702 99 -------VKHGVSLSVLGADA--ASPSALARAKAAVEAALRSS 132 (275)
T ss_pred -------ceEEEEeccCCCCC--CCccHHHHHHHHHHHHHHhc
Confidence 34577777766543 34457888888887776654
No 440
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=25.73 E-value=1.7e+02 Score=23.09 Aligned_cols=40 Identities=13% Similarity=0.172 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeC
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNA 55 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ 55 (218)
++.+.+++.|..+.+..+|.-+++.++.+.+. ++|++|.+
T Consensus 236 ~~v~~~~~~Gl~v~~WTv~~n~~~~~~~l~~~------GVdgIiTD 275 (286)
T cd08606 236 RLIQVVKRSGLVCVSYGVLNNDPENAKTQVKA------GVDAVIVD 275 (286)
T ss_pred HHHHHHHHCCcEEEEECCccCCHHHHHHHHHc------CCCEEEEC
Confidence 45566666666666555666667766666553 67777754
No 441
>cd06304 PBP1_BmpA_like Periplasmic binding component of a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. Periplasmic binding component of a family of basic membrane lipoproteins from Borrelia and various putative lipoproteins from other bacteria. These outer membrane proteins include Med, a cell-surface localized protein regulating the competence transcription factor gene comK in Bacillus subtilis, and PnrA, a periplasmic purine nucleoside binding protein of an ATP-binding cassette (ABC) transport system in Treponema pallidum. All contain the type I periplasmic sugar-binding protein-like fold.
Probab=25.72 E-value=2.8e+02 Score=21.13 Aligned_cols=44 Identities=14% Similarity=0.136 Sum_probs=26.6
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 56 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~a 56 (218)
+.+.+.+++.|.++.+...+ +++...++++.+.+. ++|++|...
T Consensus 21 ~gi~~~~~~~gy~~~~~~~~--~~~~~~~~~~~l~~~--~vdgiii~~ 64 (260)
T cd06304 21 EGLEKAEKELGVEVKYVESV--EDADYEPNLRQLAAQ--GYDLIFGVG 64 (260)
T ss_pred HHHHHHHHhcCceEEEEecC--CHHHHHHHHHHHHHc--CCCEEEECC
Confidence 33444455556565555444 556666777766554 789887754
No 442
>KOG3923 consensus D-aspartate oxidase [Amino acid transport and metabolism]
Probab=25.72 E-value=1.6e+02 Score=24.05 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCC
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF 60 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~ 60 (218)
+.-+.+.+.+.| +.+++=-+++.+++.+ ...|+||||+|...
T Consensus 154 lpyl~k~l~e~G--vef~~r~v~~l~E~~~---------~~~DVivNCtGL~a 195 (342)
T KOG3923|consen 154 LPYLKKRLTENG--VEFVQRRVESLEEVAR---------PEYDVIVNCTGLGA 195 (342)
T ss_pred hHHHHHHHHhcC--cEEEEeeeccHHHhcc---------CCCcEEEECCcccc
Confidence 344566677766 4556666666555433 37999999999765
No 443
>PRK02412 aroD 3-dehydroquinate dehydratase; Provisional
Probab=25.17 E-value=3.3e+02 Score=21.21 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=35.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCH----HHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKR----EDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~----~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+.+.+.+.+-++.+...+.++.-+++|.-+. +.+......+++.++.+-+++..=.
T Consensus 24 ~~~~~e~~~~~~~~~~~~aD~vElRlD~l~~~~~~~~~~~~~~~l~~~~~~~PiI~T~R~ 83 (253)
T PRK02412 24 GKTLEEVLAEALAISKYDADIIEWRADFLEKISDVESVLAAAPAIREKFAGKPLLFTFRT 83 (253)
T ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEechhhccCCHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence 3444444343444444567788888997744 6666667777777667777776554
No 444
>cd01574 PBP1_LacI Ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of LacI is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA b
Probab=25.06 E-value=3e+02 Score=20.75 Aligned_cols=48 Identities=15% Similarity=0.072 Sum_probs=29.5
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
++.+.+.+++.|..+..+..+-.+.+...++++.+.+. ++|++|....
T Consensus 18 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~vdgiii~~~ 65 (264)
T cd01574 18 LAAIESAAREAGYAVTLSMLAEADEEALRAAVRRLLAQ--RVDGVIVNAP 65 (264)
T ss_pred HHHHHHHHHHCCCeEEEEeCCCCchHHHHHHHHHHHhc--CCCEEEEeCC
Confidence 34455555566666665555544556666777776554 7898886543
No 445
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated
Probab=25.04 E-value=3.5e+02 Score=23.00 Aligned_cols=42 Identities=17% Similarity=0.252 Sum_probs=22.9
Q ss_pred HHHHHhcCCCeeEEEecCCC--HHHHHHHHHHHHHHhCCccEEEeC
Q 027828 12 VAALHSLGIPAIGLEGDVRK--REDAVRVVESTINHFGKLDILVNA 55 (218)
Q Consensus 12 ~~~l~~~~~~~~~~~~D~s~--~~~~~~~~~~~~~~~~~ld~li~~ 55 (218)
++++-+.|.++ +..|.+. .+.+.+++.+++++++.++++.-|
T Consensus 158 v~~lv~aGvDv--I~iD~a~g~~~~~~~~v~~ik~~~p~~~vi~g~ 201 (404)
T PRK06843 158 VEELVKAHVDI--LVIDSAHGHSTRIIELVKKIKTKYPNLDLIAGN 201 (404)
T ss_pred HHHHHhcCCCE--EEEECCCCCChhHHHHHHHHHhhCCCCcEEEEe
Confidence 33444445444 4445554 356666777777776655554433
No 446
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=24.67 E-value=2.9e+02 Score=21.46 Aligned_cols=42 Identities=19% Similarity=0.232 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEE
Q 027828 7 VLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILV 53 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li 53 (218)
.+++.++.+++.+..+.++-..+...++. .+.++++.+|+++
T Consensus 159 ~~~~~v~~~~~~~~D~iVvl~H~g~~~d~-----~la~~~~~iD~Il 200 (257)
T cd07406 159 TARELVDELREQGADLIIALTHMRLPNDK-----RLAREVPEIDLIL 200 (257)
T ss_pred HHHHHHHHHHhCCCCEEEEEeccCchhhH-----HHHHhCCCCceEE
Confidence 34555556666666666665555544332 2334456778665
No 447
>COG1897 MetA Homoserine trans-succinylase [Amino acid transport and metabolism]
Probab=24.62 E-value=2.3e+02 Score=22.49 Aligned_cols=62 Identities=18% Similarity=0.179 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHHHH-HhCCccEEEeCCCCCCCCCCCCCC-HHHHHHHH---hhhhhhHHHHHHHHHH
Q 027828 31 KREDAVRVVESTIN-HFGKLDILVNAAAGNFLVPAEDLS-PNGFRTVI---EIDSVGTFIMCHEALK 92 (218)
Q Consensus 31 ~~~~~~~~~~~~~~-~~~~ld~li~~ag~~~~~~~~~~~-~~~~~~~~---~~n~~~~~~l~~~~~~ 92 (218)
..+-+.++...+.+ +..++|++|-..+-...-+|++.+ ++++.++| +.|+.+++++|=.+.-
T Consensus 81 p~eHl~~FY~tfeeVk~~~FDG~IiTGAPve~l~feeV~YW~el~~I~eWskt~V~STl~ICWgaqA 147 (307)
T COG1897 81 PAEHLNSFYCTFEEVKDQKFDGLIITGAPVELLPFEEVAYWEELKQIFEWSKTHVTSTLHICWGAQA 147 (307)
T ss_pred cHHHHHHHhhcHHHHhhcccCceEEeCCcccccCchhhhhHHHHHHHHHHHhhcchhhhhhHHHHHH
Confidence 35566666544433 223899988765544444555544 45555555 4899999988854443
No 448
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=24.41 E-value=3.5e+02 Score=23.15 Aligned_cols=70 Identities=14% Similarity=0.104 Sum_probs=43.4
Q ss_pred CCcHHHHHHHHHHHHhcC--CCeeEEEecCCCHHHHHHHHHHHHHH--hCCccEEEeCCCCCCCCCCCCCCHHH
Q 027828 2 GRRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINH--FGKLDILVNAAAGNFLVPAEDLSPNG 71 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~--~~~ld~li~~ag~~~~~~~~~~~~~~ 71 (218)
+.+...++.+...+.... .++..+.+=+--.+...++++.+... .+.+|+||..=|.+....++.++.+.
T Consensus 137 s~~~aa~~D~~~~~~~r~p~~~~~~~~~~vQG~~a~~~i~~al~~~~~~~~~dviii~RGGGs~eDL~~Fn~e~ 210 (432)
T TIGR00237 137 SQTGAALADILHILKRRDPSLKVVIYPTLVQGEGAVQSIVESIELANTKNECDVLIVGRGGGSLEDLWSFNDEK 210 (432)
T ss_pred CCccHHHHHHHHHHHhhCCCceEEEecccccCccHHHHHHHHHHHhhcCCCCCEEEEecCCCCHHHhhhcCcHH
Confidence 456667778888887653 35655555555555555555555432 34589999988876655555555444
No 449
>PRK06774 para-aminobenzoate synthase component II; Provisional
Probab=24.17 E-value=2.1e+02 Score=21.02 Aligned_cols=43 Identities=14% Similarity=0.033 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~ 61 (218)
-+.+.+++.|.++.++..|..+.++++.+ .+|+||...|-..+
T Consensus 14 nl~~~l~~~~~~~~v~~~~~~~~~~~~~~---------~~~~iilsgGP~~~ 56 (191)
T PRK06774 14 NLYQYFCELGTEVMVKRNDELQLTDIEQL---------APSHLVISPGPCTP 56 (191)
T ss_pred HHHHHHHHCCCcEEEEeCCCCCHHHHHhc---------CCCeEEEcCCCCCh
Confidence 35666777788899999887666665332 67999998885443
No 450
>TIGR03682 arCOG04112 arCOG04112 universal archaeal diphthamide biosynthesis domain protein. This family of proteins has been observed universally in archaeal genomes and contains a match to the TIGR00322 model for the diphthamide biosynthesis protein 2-related domain.
Probab=24.10 E-value=2.3e+02 Score=22.99 Aligned_cols=46 Identities=24% Similarity=0.243 Sum_probs=36.3
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
++.+.++++.+.+++.|.+...+.+|--+++.+..+ ++|+.|+.|-
T Consensus 226 ~~~~~~~~l~~ll~~~gkk~y~i~~~~in~~kL~nf---------~iD~fV~~aC 271 (308)
T TIGR03682 226 RRPELAEELKKLLEELGKEALLILLDNISPDQLRNL---------DFDAYVNTAC 271 (308)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHhcC---------CcCEEEEccC
Confidence 345667888888888899999999988888877544 4898888776
No 451
>PRK00654 glgA glycogen synthase; Provisional
Probab=24.03 E-value=1.3e+02 Score=25.81 Aligned_cols=43 Identities=12% Similarity=0.149 Sum_probs=29.1
Q ss_pred eEEEecccccccCCcchhHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecCc
Q 027828 109 IIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 109 ~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG~ 161 (218)
+|++||+-...... -.++.-++.+|+++|+ +.|..|..+.|.+
T Consensus 2 ~i~~vs~e~~P~~k---------~GGl~~~v~~L~~~L~-~~G~~V~v~~p~y 44 (466)
T PRK00654 2 KILFVASECAPLIK---------TGGLGDVVGALPKALA-ALGHDVRVLLPGY 44 (466)
T ss_pred eEEEEEcccccCcc---------cCcHHHHHHHHHHHHH-HCCCcEEEEecCC
Confidence 48888886422111 1256667788888888 7788888888874
No 452
>PF13433 Peripla_BP_5: Periplasmic binding protein domain; PDB: 1QNL_A 1QO0_A 1PEA_A.
Probab=23.99 E-value=3.6e+02 Score=22.58 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=27.0
Q ss_pred HHHHHHhcCCCeeE-EEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 11 AVAALHSLGIPAIG-LEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 11 ~~~~l~~~~~~~~~-~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+.+.+.+.|+++.. .-+.+. ..++..+++++++. ++|+|+++.-
T Consensus 154 ~r~~l~~~GgevvgE~Y~plg-~td~~~ii~~I~~~--~Pd~V~stlv 198 (363)
T PF13433_consen 154 IRDLLEARGGEVVGERYLPLG-ATDFDPIIAEIKAA--KPDFVFSTLV 198 (363)
T ss_dssp HHHHHHHTT-EEEEEEEE-S--HHHHHHHHHHHHHH--T-SEEEEE--
T ss_pred HHHHHHHcCCEEEEEEEecCC-chhHHHHHHHHHhh--CCCEEEEeCc
Confidence 44555566777653 224443 38889999999988 8998887764
No 453
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=23.96 E-value=2.6e+02 Score=23.25 Aligned_cols=71 Identities=11% Similarity=0.131 Sum_probs=43.9
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhh------hhhH
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEID------SVGT 83 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n------~~~~ 83 (218)
.+.++|.+.|+++.++.+|.+ .+++.++ .+|+|+..-|-..|.+ .+...+.+.+.+... .+|.
T Consensus 192 nIlr~L~~rg~~vtVVP~~t~-~eeIl~~---------~pDGiflSNGPGDP~~-~~~~i~~ik~l~~~~iPifGICLGH 260 (368)
T COG0505 192 NILRELVKRGCRVTVVPADTS-AEEILAL---------NPDGIFLSNGPGDPAP-LDYAIETIKELLGTKIPIFGICLGH 260 (368)
T ss_pred HHHHHHHHCCCeEEEEcCCCC-HHHHHhh---------CCCEEEEeCCCCChhH-HHHHHHHHHHHhccCCCeEEEcHHH
Confidence 356677778999999999876 3333332 7899988877655533 223345555665554 3455
Q ss_pred HHHHHHHH
Q 027828 84 FIMCHEAL 91 (218)
Q Consensus 84 ~~l~~~~~ 91 (218)
..+..++-
T Consensus 261 QllalA~G 268 (368)
T COG0505 261 QLLALALG 268 (368)
T ss_pred HHHHHhcC
Confidence 55555543
No 454
>TIGR00536 hemK_fam HemK family putative methylases. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both E. coli and H. influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.
Probab=23.89 E-value=2.5e+02 Score=22.17 Aligned_cols=47 Identities=13% Similarity=0.003 Sum_probs=27.5
Q ss_pred cHHHHHHHHHHHHhcCC--CeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 027828 4 RKTVLRSAVAALHSLGI--PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~--~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~ 61 (218)
+.+.++.+.+-+...+. ++.++.+|+.+. + . ..++|++|.|......
T Consensus 147 s~~al~~a~~n~~~~~~~~~v~~~~~d~~~~-----~----~--~~~fDlIvsNPPyi~~ 195 (284)
T TIGR00536 147 SPDALAVAEENAEKNQLEHRVEFIQSNLFEP-----L----A--GQKIDIIVSNPPYIDE 195 (284)
T ss_pred CHHHHHHHHHHHHHcCCCCcEEEEECchhcc-----C----c--CCCccEEEECCCCCCc
Confidence 44555555555544443 377777776532 0 0 0268999999886543
No 455
>PLN02970 serine racemase
Probab=23.87 E-value=2.4e+02 Score=22.93 Aligned_cols=23 Identities=13% Similarity=0.323 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhCCccEEEeCCCC
Q 027828 36 VRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 36 ~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
..+..++.++++.+|.+|...|.
T Consensus 163 ~t~g~Ei~~ql~~~D~vv~~vG~ 185 (328)
T PLN02970 163 GTIALEFLEQVPELDVIIVPISG 185 (328)
T ss_pred HHHHHHHHHhccCCCEEEEeeCc
Confidence 33444555555555666555553
No 456
>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2.2.1.1 from EC (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources [, ] show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Pichia angusta (Yeast) (Hansenula polymorpha), there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) 2.2.1.3 from EC (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates. 1-deoxyxylulose-5-phosphate synthase (DXP synthase) [] is an enzyme so far found in bacteria (gene dxs) and plants (gene CLA1) which catalyzes the thiamine pyrophosphoate-dependent acyloin condensation reaction between carbon atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (dxp), a precursor in the biosynthetic pathway to isoprenoids, thiamine (vitamin B1), and pyridoxol (vitamin B6). DXP synthase is evolutionary related to TK. The N-terminal section, contains a histidine residue which appears to function in proton transfer during catalysis []. In the central section there are conserved acidic residues that are part of the active cleft and may participate in substrate-binding []. This family includes transketolase enzymes 2.2.1.1 from EC and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit P37941 from SWISSPROT 1.2.4.4 from EC. Both these enzymes utilise thiamine pyrophosphate as a cofactor, suggesting there may be common aspects in their mechanism of catalysis.; PDB: 3M49_B 1NGS_B 1TKA_A 1TRK_B 1TKB_A 1GPU_B 1AY0_B 1TKC_B 3HYL_A 3RIM_A ....
Probab=23.81 E-value=2.6e+02 Score=22.97 Aligned_cols=48 Identities=15% Similarity=0.218 Sum_probs=35.3
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+.+.+.+++.|-++..+ +|=.|.+++.+++++++...+++.+||...=
T Consensus 196 ~~~~~k~~a~Gw~v~~v-~dGhd~~~i~~A~~~a~~~~~kP~~Ii~~Tv 243 (332)
T PF00456_consen 196 EDIAKKFEAFGWNVIEV-CDGHDVEAIYAAIEEAKASKGKPTVIIARTV 243 (332)
T ss_dssp SHHHHHHHHTT-EEEEE-EETTBHHHHHHHHHHHHHSTSS-EEEEEEE-
T ss_pred hHHHHHHHHhhhhhccc-ccCcHHHHHHHHHHHHHhcCCCCceeecceE
Confidence 45677777878766555 7999999999999998876678887776643
No 457
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific. Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.
Probab=23.74 E-value=3.8e+02 Score=21.31 Aligned_cols=49 Identities=14% Similarity=-0.010 Sum_probs=30.3
Q ss_pred CcHHHHHHHHHHHHhcC--CCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCC
Q 027828 3 RRKTVLRSAVAALHSLG--IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLV 62 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~ 62 (218)
.+.+.++.+.+-+...+ .++.++.+|+.+. +. .+++|+||.|.......
T Consensus 153 is~~al~~A~~n~~~~~~~~~i~~~~~D~~~~---------~~--~~~fD~Iv~NPPy~~~~ 203 (284)
T TIGR03533 153 ISPDALAVAEINIERHGLEDRVTLIQSDLFAA---------LP--GRKYDLIVSNPPYVDAE 203 (284)
T ss_pred CCHHHHHHHHHHHHHcCCCCcEEEEECchhhc---------cC--CCCccEEEECCCCCCcc
Confidence 34555666666655544 3577888887531 10 13699999998865543
No 458
>PF07005 DUF1537: Protein of unknown function, DUF1537; InterPro: IPR010737 This entry represents a conserved region found in a range of Proteobacteria as well as the Gram-positive Oceanobacillus iheyensis. This entry includes YgbK from Escherichia coli, which is dependent upon FlhDC, the master regulator of the flagellar genes. The ygbK gene appears to be regulated by sigmaF [].; PDB: 3DQQ_B 1YZY_B.
Probab=23.61 E-value=1.6e+02 Score=22.19 Aligned_cols=50 Identities=26% Similarity=0.260 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
.+.+.+..+.+.+.| ..++.+|..++++++.+.+.+.+...+. +++-.+|
T Consensus 18 ~~~l~~~l~~~~~~g--~~ivV~Da~t~~DL~~ia~a~~~~~~~~-l~vGsag 67 (223)
T PF07005_consen 18 PEALSAALAALQAEG--ARIVVFDAETDEDLDAIAEALLELGRRV-LWVGSAG 67 (223)
T ss_dssp HHHHHHHHHHHHHTT--ECEEEE-BSSCHHHHHHHHHCTT-S----EEEESCH
T ss_pred HHHHHHHHHHHHhCC--CcEEEEecCCHHHHHHHHHHHHhCCCce-EEecchH
Confidence 344555555555544 4678999999999999988776542233 4444444
No 459
>COG0009 SUA5 Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]
Probab=23.38 E-value=3.4e+02 Score=20.68 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhcCC-------CeeEEEecCCCHHHHHHHHHHHHHH
Q 027828 7 VLRSAVAALHSLGI-------PAIGLEGDVRKREDAVRVVESTINH 45 (218)
Q Consensus 7 ~l~~~~~~l~~~~~-------~~~~~~~D~s~~~~~~~~~~~~~~~ 45 (218)
.++++++.+++ |. .+..+-||..|++.++++++ ++++
T Consensus 15 ~~~~a~~~l~~-G~vVa~PTeTVYGLg~~~~~~~Av~~i~~-~K~R 58 (211)
T COG0009 15 AIEKAVEALRK-GGVVAYPTDTVYGLGADATNEEAVERLYE-IKQR 58 (211)
T ss_pred HHHHHHHHHHc-CCEEEEEccchheeecCCCCHHHHHHHHH-HhCC
Confidence 57888888887 43 33457899999999999876 5554
No 460
>PLN02892 isocitrate lyase
Probab=23.37 E-value=5.4e+02 Score=22.98 Aligned_cols=53 Identities=9% Similarity=0.034 Sum_probs=41.2
Q ss_pred CCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHH
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGF 72 (218)
Q Consensus 19 ~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~ 72 (218)
...+.|+..+.-|.++++++.+.+++.++.--..+|+.....+.. ..++.+.+
T Consensus 400 yaDliW~ET~~Pdl~~A~~Fa~~V~~~~P~k~LaYNlSPSFNW~~-~g~~d~~i 452 (570)
T PLN02892 400 YADLIWMETASPDLAEATKFAEGVKAKHPEIMLAYNLSPSFNWDA-SGMTDEQM 452 (570)
T ss_pred ccCEEEecCCCCCHHHHHHHHHHHHHhCCCCeeeecCCCCcCCCC-CCCCHHHH
Confidence 467899999999999999999999999998878888877655432 13444443
No 461
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=22.95 E-value=4e+02 Score=21.31 Aligned_cols=50 Identities=16% Similarity=0.120 Sum_probs=24.8
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHH---HHHHHHHHHhC---CccEEEeCCCC
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAV---RVVESTINHFG---KLDILVNAAAG 58 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~---~~~~~~~~~~~---~ld~li~~ag~ 58 (218)
+++.+++.+.+....++..+-.++..+. .+..++.++.+ .+|.+|..+|.
T Consensus 124 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~~~~~~EI~~q~~~~~~~D~vv~~vGt 179 (311)
T TIGR01275 124 EELAEELEKEGRKPYVIPVGGSNSLGTLGYVEAVLEIATQLESEVKFDSIVVAAGS 179 (311)
T ss_pred HHHHHHHHhcCCCeEEECCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 3334444333333434444444544333 23445555553 57888877774
No 462
>PRK07649 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II; Validated
Probab=22.54 E-value=2.7e+02 Score=20.73 Aligned_cols=43 Identities=21% Similarity=0.074 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~ 61 (218)
-+.+.|++.|.++.++..|..+.+++.. ..+|+||...|-..+
T Consensus 14 nl~~~l~~~g~~v~v~~~~~~~~~~~~~---------~~~d~iIlsgGP~~p 56 (195)
T PRK07649 14 NLVQFLGELGQELVVKRNDEVTISDIEN---------MKPDFLMISPGPCSP 56 (195)
T ss_pred HHHHHHHHCCCcEEEEeCCCCCHHHHhh---------CCCCEEEECCCCCCh
Confidence 3667777778899999988766554422 268999998885443
No 463
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=22.52 E-value=1.1e+02 Score=25.40 Aligned_cols=28 Identities=14% Similarity=0.138 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 132 KAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 132 K~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
+.++..++.+.-+|.+ ++|+.|..++|-
T Consensus 85 ~G~~~~Ll~~sLre~~-~kG~p~s~L~P~ 112 (389)
T COG4552 85 RGALRALLAHSLREIA-RKGYPVSALHPF 112 (389)
T ss_pred CcHHHHHHHHHHHHHH-HcCCeeEEeccC
Confidence 4466667777777777 889999999994
No 464
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]
Probab=22.32 E-value=4.8e+02 Score=21.98 Aligned_cols=30 Identities=27% Similarity=0.558 Sum_probs=23.3
Q ss_pred cCCCHHHHHHHHHHHHHHhC--Ccc-EEEeCCC
Q 027828 28 DVRKREDAVRVVESTINHFG--KLD-ILVNAAA 57 (218)
Q Consensus 28 D~s~~~~~~~~~~~~~~~~~--~ld-~li~~ag 57 (218)
.+.+.+++++.+++=.++++ .+| ++||+.+
T Consensus 88 ~~~~~edm~r~fneqLekl~~Dy~D~yliH~l~ 120 (391)
T COG1453 88 PVKDREDMERIFNEQLEKLGTDYIDYYLIHGLN 120 (391)
T ss_pred cccCHHHHHHHHHHHHHHhCCchhhhhhhcccc
Confidence 78899999999998888765 577 4566655
No 465
>PF05397 Med15_fungi: Mediator complex subunit 15; InterPro: IPR008626 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. This family represents subunit 15 of the Mediator complex in fungi. It contains Saccharomyces cerevisiae GAL11 (Med15) protein. Gal11 (Med15) and Sin4 (Med16) proteins are S. cerevisiae global transcription factors that regulate transcription of a variety of genes, both positively and negatively. Gal11, in a major part, functions in the activation of transcription, whereas Sin4 has an opposite role [].; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex
Probab=22.29 E-value=58 Score=22.12 Aligned_cols=53 Identities=4% Similarity=0.075 Sum_probs=37.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeEEEecCCCH--HHHHHHHHHHHHHhCCccEEEe
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKR--EDAVRVVESTINHFGKLDILVN 54 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~--~~~~~~~~~~~~~~~~ld~li~ 54 (218)
.+..+.+.++.+++.....+...+.-++|.. ..+.+.+......++++|.+|.
T Consensus 2 ~~~~~~ik~l~~e~~~~~~~l~~v~~~ls~eeK~~i~~~l~~~~~m~~~vd~li~ 56 (115)
T PF05397_consen 2 EELPERIKQLYEEVSRNPVRLSPVTNSLSPEEKAAIRQQLQEIQDMLARVDSLIP 56 (115)
T ss_pred cchHHHHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888889998887766666777777753 3455666666667778887654
No 466
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=22.24 E-value=2.9e+02 Score=22.42 Aligned_cols=41 Identities=17% Similarity=0.337 Sum_probs=22.3
Q ss_pred HHHHHHHHHhcCCCeeEEEecCC-CHHHHHHHHHHHHHHhCCccEEE
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVR-KREDAVRVVESTINHFGKLDILV 53 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~~ld~li 53 (218)
+++.+++|++.+.++.++-.-+. -.++ ..+.++.+.||+||
T Consensus 196 ~~~~v~~Lr~~gvD~II~LsH~g~~~~d-----~~lA~~v~gIDvIi 237 (313)
T cd08162 196 IQPSIDALTAQGINKIILLSHLQQISIE-----QALAALLSGVDVII 237 (313)
T ss_pred HHHHHHHHHHCCCCEEEEEecccccchH-----HHHHhcCCCCCEEE
Confidence 56677777776666655443332 1111 12344456788777
No 467
>PRK06382 threonine dehydratase; Provisional
Probab=22.23 E-value=2.4e+02 Score=23.73 Aligned_cols=53 Identities=6% Similarity=-0.082 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhcCCCeeEEEec-CCCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 7 VLRSAVAALHSLGIPAIGLEGD-VRKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 7 ~l~~~~~~l~~~~~~~~~~~~D-~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
...+.++++.+........+.| ....+....+.-++.++++.+|.+|...|..
T Consensus 131 ~a~~~a~~la~~~~~~~v~~~~~~~~i~g~~t~~~Ei~eq~~~~d~vvvpvG~G 184 (406)
T PRK06382 131 EAHRYADKIAMDENRTFIEAFNDRWVISGQGTIGLEIMEDLPDLDQIIVPVGGG 184 (406)
T ss_pred HHHHHHHHHHHhcCCEecCccCChHHHHHHHHHHHHHHHhcCCCCEEEEeeChH
Confidence 3344455554443333333342 3334445567778888888999999998843
No 468
>cd06354 PBP1_BmpA_PnrA_like Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and Archaea. The PnrA lipoprotein, also known as Tp0319 or TmpC, represents a novel family of bacterial purine nucleoside receptor encoded within an ATP-binding cassette (ABC) transport system (pnrABCDE). It shows a striking structural similarity to another basic membrane lipoprotein Med which regulates the competence transcription factor gene, comK, in Bacillus subtilis. The members of PnrA-like subgroup are likely to have similar nucleoside-binding functions and a similar type I periplasmic sugar-binding protein-like fold.
Probab=22.16 E-value=3.6e+02 Score=20.72 Aligned_cols=45 Identities=20% Similarity=0.206 Sum_probs=27.1
Q ss_pred HHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCC
Q 027828 8 LRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAA 56 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~a 56 (218)
++.+.+.+++.|-++.....+ +.++..+.++.+.+ .++|++|...
T Consensus 21 ~~gi~~~~~~~gy~~~i~~~~--~~~~~~~~i~~l~~--~~vdgiI~~~ 65 (265)
T cd06354 21 WEGLERAAKELGIEYKYVESK--SDADYEPNLEQLAD--AGYDLIVGVG 65 (265)
T ss_pred HHHHHHHHHHcCCeEEEEecC--CHHHHHHHHHHHHh--CCCCEEEEcC
Confidence 344555566666555554443 55555666666655 3899888754
No 469
>COG1736 DPH2 Diphthamide synthase subunit DPH2 [Translation, ribosomal structure and biogenesis]
Probab=22.11 E-value=2.7e+02 Score=23.12 Aligned_cols=47 Identities=26% Similarity=0.266 Sum_probs=37.1
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
|+...++++.+.+.+.|.++..+..|-.+++.+..+ ..+|..|+.+-
T Consensus 251 ~r~~~~~~l~k~~~~~g~~~~li~~~~i~p~~L~~f--------~~iD~~v~taC 297 (347)
T COG1736 251 RRLEVARELVKLLKEAGKEVYLIVVDEISPDKLANF--------DDIDAFVNTAC 297 (347)
T ss_pred CcHHHHHHHHHHHHHcCCceEEEEecCCCHHHHhcc--------cceeEEEEecC
Confidence 345667788888888898999999999998887665 36888888776
No 470
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=22.06 E-value=3.4e+02 Score=20.19 Aligned_cols=21 Identities=29% Similarity=0.259 Sum_probs=15.5
Q ss_pred HHhhhcCCCCeEEeeeecCccc
Q 027828 142 LALEWGTDYAIRVNGIAPGPIK 163 (218)
Q Consensus 142 la~el~~~~gi~v~~v~pG~v~ 163 (218)
++.++. +.||+|..|.-|-..
T Consensus 128 ~~~~lk-k~~I~v~vI~~G~~~ 148 (187)
T cd01452 128 LAKRLK-KNNVSVDIINFGEID 148 (187)
T ss_pred HHHHHH-HcCCeEEEEEeCCCC
Confidence 344555 779999999988664
No 471
>PRK11634 ATP-dependent RNA helicase DeaD; Provisional
Probab=22.01 E-value=3.7e+02 Score=24.31 Aligned_cols=52 Identities=27% Similarity=0.405 Sum_probs=37.4
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
++....+++.+.|.+.|..+..+.+|++..+ -+..++.++. |.+++||..--
T Consensus 253 ~tk~~a~~l~~~L~~~g~~~~~lhgd~~q~~-R~~il~~Fr~--G~~~ILVATdv 304 (629)
T PRK11634 253 RTKNATLEVAEALERNGYNSAALNGDMNQAL-REQTLERLKD--GRLDILIATDV 304 (629)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEeeCCCCHHH-HHHHHHHHhC--CCCCEEEEcch
Confidence 4566678888888888888889999988554 3445555443 68888887643
No 472
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=21.93 E-value=3e+02 Score=24.70 Aligned_cols=53 Identities=17% Similarity=0.207 Sum_probs=38.1
Q ss_pred CcHHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 3 RRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 3 R~~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
++..+.+.+++.|.+.|.++..+++++++.+-. ..-+.+. .+.+.++|...++
T Consensus 238 ~sRk~~E~ia~~L~~~g~~a~~YHaGl~~~eR~-~~q~~f~--~~~~~iiVAT~AF 290 (590)
T COG0514 238 LTRKKVEELAEWLRKNGISAGAYHAGLSNEERE-RVQQAFL--NDEIKVMVATNAF 290 (590)
T ss_pred eeHHhHHHHHHHHHHCCCceEEecCCCCHHHHH-HHHHHHh--cCCCcEEEEeccc
Confidence 456778999999999999999999999876542 2222222 3578888876653
No 473
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=21.89 E-value=4.6e+02 Score=21.92 Aligned_cols=53 Identities=15% Similarity=0.093 Sum_probs=32.3
Q ss_pred CceEEEeccccccc-----CCcch-----hHhHHhHHHHHHHHHHHHhhhcCCCCeEEeeeecC
Q 027828 107 GGIIINISATLHYT-----ATWYQ-----IHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 107 ~~~iv~iss~~~~~-----~~~~~-----~~y~~sK~a~~~~~~~la~el~~~~gi~v~~v~pG 160 (218)
+-.+|.|||.+--. +.+.. .--+++--++..+++.+..-+. .+|+++-=|...
T Consensus 44 G~eVilVSSGAiaaG~~~Lg~~~rp~~l~~kQA~AAVGQ~~Lm~~y~~~f~-~~g~~v~QiLLT 106 (369)
T COG0263 44 GHEVVLVSSGAIAAGRTRLGLPKRPKTLAEKQAAAAVGQVRLMQLYEELFA-RYGIKVGQILLT 106 (369)
T ss_pred CCEEEEEccchhhhChhhcCCCCCCcchHHHHHHHHhCHHHHHHHHHHHHH-hcCCeeeEEEee
Confidence 46789999876211 12211 1123333456778888888888 889887766543
No 474
>PRK03604 moaC bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; Provisional
Probab=21.36 E-value=4.6e+02 Score=21.40 Aligned_cols=75 Identities=12% Similarity=0.158 Sum_probs=49.8
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHH
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMC 87 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 87 (218)
..+.+.+++.|.++..+..--.|.+.+.+.++.+.. ...|+||.+-|... ...+.+.+.+....+..+.+.-...
T Consensus 178 ~~L~~~L~~~G~~v~~~~iVpDD~~~I~~al~~a~~--~~~DlIITTGGtg~--g~~D~tpeAl~~lg~~~~~Gvae~i 252 (312)
T PRK03604 178 KLIVEGLEEAGFEVSHYTIIPDEPAEIAAAVAAWIA--EGYALIITTGGTGL--GPRDVTPEALAPLLERRLPGIAEAL 252 (312)
T ss_pred HHHHHHHHHCCCEEEEEEEcCCCHHHHHHHHHHhhh--CCCCEEEECCCCCC--CCCccHHHHHHHhcCccccchHHHH
Confidence 345666777787777666656677777777766532 36899999877543 2356778888877766666644433
No 475
>cd03768 SR_ResInv Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain. Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. Resolvases and invertases affect resolution or inversion and comprise a major phylogenic group. Resolvases (e.g. Tn3, gamma-delta, and Tn5044) normally recombine two sites in direct repeat causing deletion of the DNA between the sites. Invertases (e.g. Gin and Hin) recombine sites in inverted repeat to invert the DNA between the sites. Cointegrate resolution with gamma-delta resolvase requires the formation of a synaptosome of three resolvase dimers bound to each of two res sites on the DNA. Also included in this subfamily are some
Probab=21.28 E-value=2.6e+02 Score=18.58 Aligned_cols=47 Identities=15% Similarity=0.121 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecCC--CHHHHHHHHHHHHHHhCCccEEEeC
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDVR--KREDAVRVVESTINHFGKLDILVNA 55 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~s--~~~~~~~~~~~~~~~~~~ld~li~~ 55 (218)
+.++++.+.+. .+..+.+...|=- +..++..++..+.+. ++.+++..
T Consensus 43 ~~~~~ll~~~~-~~d~lvv~~~dRl~R~~~e~~~~~~~l~~~--gi~l~~~~ 91 (126)
T cd03768 43 PELQKLLEDLR-EGDTLVVTKLDRLGRSTKDLLEIVEELREK--GVSLRSLT 91 (126)
T ss_pred HHHHHHHHhCc-CCCEEEEEEcchhcCcHHHHHHHHHHHHHC--CCEEEEec
Confidence 45677777665 2322333333322 344555666665543 56666653
No 476
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=21.19 E-value=2.8e+02 Score=22.65 Aligned_cols=50 Identities=24% Similarity=0.319 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhcC------CCeeEEEecCCCHHH--HHHHHHHHHHHhCCccEEEe
Q 027828 5 KTVLRSAVAALHSLG------IPAIGLEGDVRKRED--AVRVVESTINHFGKLDILVN 54 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~------~~~~~~~~D~s~~~~--~~~~~~~~~~~~~~ld~li~ 54 (218)
-++.-.+.+.+++.| +++.....|+-|.|. +.+..+.++++|+++-+|+-
T Consensus 117 ~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdrE~~Fi~~vl~pl~~~fP~LKIV~E 174 (344)
T COG0418 117 IEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDREAAFIESVLEPLRQRFPKLKIVLE 174 (344)
T ss_pred HHHHHHHHHHHHHcCCeEEEecccCCccccchhhHHHHHHHHHHHHHhhCCcceEEEE
Confidence 445556666666655 455566778877774 66688889999999998874
No 477
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=21.12 E-value=4.4e+02 Score=21.12 Aligned_cols=54 Identities=19% Similarity=0.177 Sum_probs=32.3
Q ss_pred CCccEEEeCCCCCCCCCCCCCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccc
Q 027828 47 GKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATL 117 (218)
Q Consensus 47 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~ 117 (218)
..-|++|+.+|.+... .++.. ..++. ...+.+.+.+.+.+... .+.++++|-..
T Consensus 67 ~~aDIVIitag~~~~~---g~~R~---dll~~----N~~i~~~~~~~i~~~~~-------~~~vivvsNP~ 120 (306)
T cd05291 67 KDADIVVITAGAPQKP---GETRL---DLLEK----NAKIMKSIVPKIKASGF-------DGIFLVASNPV 120 (306)
T ss_pred CCCCEEEEccCCCCCC---CCCHH---HHHHH----HHHHHHHHHHHHHHhCC-------CeEEEEecChH
Confidence 4689999999975432 22322 23333 44556666666666543 57777777544
No 478
>PRK09453 phosphodiesterase; Provisional
Probab=21.08 E-value=2.7e+02 Score=20.12 Aligned_cols=27 Identities=19% Similarity=0.080 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCC
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRK 31 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~ 31 (218)
.+.++++.+.+.+.+.+..++.+|+.+
T Consensus 13 ~~~~~~~l~~~~~~~~d~ii~lGDi~~ 39 (182)
T PRK09453 13 LPATEKALELFAQSGADWLVHLGDVLY 39 (182)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcccccc
Confidence 456778888787777788888899975
No 479
>PRK08007 para-aminobenzoate synthase component II; Provisional
Probab=21.05 E-value=3.1e+02 Score=20.15 Aligned_cols=43 Identities=14% Similarity=-0.012 Sum_probs=29.7
Q ss_pred HHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 027828 10 SAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61 (218)
Q Consensus 10 ~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~ 61 (218)
-+.+.|.+.|.++.++..|-.+.+++.. ..+|+||...|-..+
T Consensus 14 nl~~~l~~~g~~v~v~~~~~~~~~~~~~---------~~~d~iils~GPg~p 56 (187)
T PRK08007 14 NLYQYFCELGADVLVKRNDALTLADIDA---------LKPQKIVISPGPCTP 56 (187)
T ss_pred HHHHHHHHCCCcEEEEeCCCCCHHHHHh---------cCCCEEEEcCCCCCh
Confidence 3566777778889888888555544422 168999998885544
No 480
>cd06306 PBP1_TorT-like TorT-like proteins, a periplasmic binding protein family that activates induction of the Tor respiratory system upon trimethylamine N-oxide (TMAO) electron-acceptor binding in bacteria. TorT-like proteins, a periplasmic binding protein family that activates induction of the Tor respiratory system upon trimethylamine N-oxide (TMAO) electron-acceptor binding in bacteria. The Tor respiratory system is consists of three proteins (TorC, TorA, and TorD) and is induced in the presence of TMAO. The TMAO control is tightly regulated by three proteins: TorS, TorT, and TorR. Thus, the disruption of any of these proteins can abolish the Tor respiratory induction. TorT shares homology with the sugar-binding domain of the type I periplasmic binding proteins. The members of TorT-like family bind TMAO or related compounds and are predicted to be involved in signal transduction and/or substrate transport.
Probab=20.98 E-value=3.9e+02 Score=20.43 Aligned_cols=22 Identities=23% Similarity=0.188 Sum_probs=16.1
Q ss_pred chhHhHHhHHHHHHHHHHHHhh
Q 027828 124 YQIHVSAAKAAVDSITRSLALE 145 (218)
Q Consensus 124 ~~~~y~~sK~a~~~~~~~la~e 145 (218)
.+..+..++.++..+.+.+.-+
T Consensus 236 ~~~~~~~G~~a~~~l~~~l~g~ 257 (268)
T cd06306 236 TDSMVLQGRLAIDQAVRILEGK 257 (268)
T ss_pred ecCHHHHHHHHHHHHHHHHcCC
Confidence 4456788888988888887543
No 481
>cd06284 PBP1_LacI_like_6 Ligand-binding domain of an uncharacterized transcription regulator from Actinobacillus succinogenes and its close homologs from other bacteria. This group includes the ligand-binding domain of an uncharacterized transcription regulator from Actinobacillus succinogenes and its close homologs from other bacteria. This group belongs to the the LacI-GalR family repressors and are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding.
Probab=20.96 E-value=3.7e+02 Score=20.22 Aligned_cols=46 Identities=7% Similarity=0.008 Sum_probs=25.3
Q ss_pred HHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 9 RSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 9 ~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+.+.+.+++.|.++.++..+ .+.+...++++.+.+. ++|++|.+..
T Consensus 19 ~~i~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~--~vdgiii~~~ 64 (267)
T cd06284 19 KGIEDEAREAGYGVLLGDTR-SDPEREQEYLDLLRRK--QADGIILLDG 64 (267)
T ss_pred HHHHHHHHHcCCeEEEecCC-CChHHHHHHHHHHHHc--CCCEEEEecC
Confidence 34455555556555444333 3444455566655544 7898877554
No 482
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=20.79 E-value=4.9e+02 Score=21.57 Aligned_cols=32 Identities=22% Similarity=0.128 Sum_probs=16.2
Q ss_pred CeeEEEecCCC--HHHHHHHHHHHHHHhCCccEE
Q 027828 21 PAIGLEGDVRK--REDAVRVVESTINHFGKLDIL 52 (218)
Q Consensus 21 ~~~~~~~D~s~--~~~~~~~~~~~~~~~~~ld~l 52 (218)
.+.++..|++. .+.+.+.+.++++.++.+.++
T Consensus 121 ~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~vi 154 (343)
T TIGR01305 121 QLKFICLDVANGYSEHFVEFVKLVREAFPEHTIM 154 (343)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEE
Confidence 34445555553 444555555666555544443
No 483
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein []. It has subsequently been found in a number of other proteins, such as polynucleotide kinase and 2',3'-cyclic-nucleotide 3'-phosphodiesterase. It appears to function as a kinase domain [, ].; GO: 0005524 ATP binding, 0016301 kinase activity; PDB: 2P5T_H 1GVN_B 3Q8X_D.
Probab=20.73 E-value=2.4e+02 Score=20.79 Aligned_cols=39 Identities=15% Similarity=0.010 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHH
Q 027828 5 KTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTI 43 (218)
Q Consensus 5 ~~~l~~~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~ 43 (218)
.+.+.++.+.+++.|-++..+.+.+....++....+...
T Consensus 105 ~~~~~~~~~~~k~~GY~v~l~~v~~~~e~s~~rv~~R~~ 143 (199)
T PF06414_consen 105 PSKLRKLIREAKAAGYKVELYYVAVPPELSIERVRQRYE 143 (199)
T ss_dssp SHHHHHHHHHHHCTT-EEEEEEE---HHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCceEEEEEEECCHHHHHHHHHHHHH
Confidence 344444445555444444444444444444444444433
No 484
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=20.69 E-value=2.8e+02 Score=18.66 Aligned_cols=47 Identities=11% Similarity=0.159 Sum_probs=31.9
Q ss_pred HHHHHHHHh-cCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCC
Q 027828 9 RSAVAALHS-LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAA 57 (218)
Q Consensus 9 ~~~~~~l~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag 57 (218)
+...+.+.+ ...++..+.+-..+...+..+.+.+++..+ +..|..-|
T Consensus 28 ~~~~~~~~~~~~pdiv~~S~~~~~~~~~~~~~~~ik~~~p--~~~iv~GG 75 (127)
T cd02068 28 DDIVEDIKELLKPDVVGISLMTSAIYEALELAKIAKEVLP--NVIVVVGG 75 (127)
T ss_pred HHHHHHHHHhcCCCEEEEeeccccHHHHHHHHHHHHHHCC--CCEEEECC
Confidence 445555554 456788888877888888888888888754 44444444
No 485
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=20.63 E-value=3.4e+02 Score=19.65 Aligned_cols=54 Identities=17% Similarity=0.261 Sum_probs=37.9
Q ss_pred cHHHHHHHHHHHHhcCCCeeEEEecC-CCHHHHHHHHHHHHHHhCCccEEEeCCCCC
Q 027828 4 RKTVLRSAVAALHSLGIPAIGLEGDV-RKREDAVRVVESTINHFGKLDILVNAAAGN 59 (218)
Q Consensus 4 ~~~~l~~~~~~l~~~~~~~~~~~~D~-s~~~~~~~~~~~~~~~~~~ld~li~~ag~~ 59 (218)
+.+..+++++.|.+.|..+....+-. ..++.+.+++++..++ ++.++|-.||..
T Consensus 14 D~~~mk~Aa~~L~~fgi~ye~~VvSAHRTPe~m~~ya~~a~~~--g~~viIAgAGgA 68 (162)
T COG0041 14 DWDTMKKAAEILEEFGVPYEVRVVSAHRTPEKMFEYAEEAEER--GVKVIIAGAGGA 68 (162)
T ss_pred hHHHHHHHHHHHHHcCCCeEEEEEeccCCHHHHHHHHHHHHHC--CCeEEEecCcch
Confidence 34556777888888787665433333 3578788887777665 899999999953
No 486
>cd01747 GATase1_Glutamyl_Hydrolase Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. Type 1 glutamine amidotransferase (GATase1) domain found in gamma-Glutamyl Hydrolase. gamma-Glutamyl Hydrolase catalyzes the cleavage of the gamma-glutamyl chain of folylpoly-gamma-glutamyl substrates and is a central enzyme in folyl and antifolyl poly-gamma-glutamate metabolism. GATase activity involves the removal of the ammonia group from a glutamate molecule and its subsequent transfer to a specific substrate, thus creating a new carbon-nitrogen group on the substrate. gamma-Glutamyl hydrolases belong to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site.
Probab=20.38 E-value=4.4e+02 Score=20.86 Aligned_cols=40 Identities=13% Similarity=0.088 Sum_probs=27.2
Q ss_pred HHHHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCC
Q 027828 11 AVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAG 58 (218)
Q Consensus 11 ~~~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~ 58 (218)
-.+.+.+.|.+++.+..|.. .+.+..+++ .+|+|+..-|.
T Consensus 25 Yv~~l~~aG~~vvpi~~~~~-~~~l~~~l~-------~~dG~l~~Gg~ 64 (273)
T cd01747 25 YVKFLESAGARVVPIWINES-EEYYDKLFK-------SINGILFPGGA 64 (273)
T ss_pred HHHHHHHCCCeEEEEEeCCc-HHHHHHHHh-------hCCEEEECCCC
Confidence 45666777888888888843 455554443 68998885553
No 487
>PF15643 Tox-PL-2: Papain fold toxin 2
Probab=20.28 E-value=2.7e+02 Score=18.41 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHHhcCCCCCCCCCCceEEEecccccccCC
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTAT 122 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~ 122 (218)
-......++...|+.++. .|++|-+.+.....++
T Consensus 20 qC~~cA~Al~~~L~~~gI-------~Gk~i~l~T~~~~~~~ 53 (100)
T PF15643_consen 20 QCVECASALKQFLKQAGI-------PGKIIRLYTGYHEGPF 53 (100)
T ss_pred ehHHHHHHHHHHHHHCCC-------CceEEEEEecCCCCce
Confidence 345667777777887765 7999999996655444
No 488
>PF07209 DUF1415: Protein of unknown function (DUF1415); InterPro: IPR009858 This family consists of several hypothetical bacterial proteins of around 180 residues in length. The function of this family is unknown.
Probab=20.27 E-value=3.7e+02 Score=19.87 Aligned_cols=84 Identities=10% Similarity=0.021 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhc----CC----CeeEEEecCCCHHHHHHHHHHHHHHh--CCccEEEeCCCCCCCCCCCCCCHHHHHHHH
Q 027828 7 VLRSAVAALHSL----GI----PAIGLEGDVRKREDAVRVVESTINHF--GKLDILVNAAAGNFLVPAEDLSPNGFRTVI 76 (218)
Q Consensus 7 ~l~~~~~~l~~~----~~----~~~~~~~D~s~~~~~~~~~~~~~~~~--~~ld~li~~ag~~~~~~~~~~~~~~~~~~~ 76 (218)
-++.+.+|+... .. .+.++.--+.|..+-..+++.+.+.. -++++++.-|++-+.=.|.+...++..+..
T Consensus 47 ll~~l~~El~~L~~~~~~~ieTTLli~P~~l~dF~dy~dfl~~a~~ll~~~~~eG~~QlAsFHP~y~F~g~~~dd~~NyT 126 (174)
T PF07209_consen 47 LLEDLLEELQRLAADDEPEIETTLLIFPNGLDDFDDYNDFLDMADALLEELGLEGVYQLASFHPDYQFAGTEPDDASNYT 126 (174)
T ss_pred HHHHHHHHHHHHhcCCccccceEEEECCCcccCHHHHHHHHHHHHHHHHHcCCCceEEEeccCccCCCCCcCccchhhhh
Confidence 366777777643 11 22333434556666555555444322 368999999998776677777888888888
Q ss_pred hhhhhhHHHHHHHH
Q 027828 77 EIDSVGTFIMCHEA 90 (218)
Q Consensus 77 ~~n~~~~~~l~~~~ 90 (218)
+..-...++++|..
T Consensus 127 NRSPyP~lHLLRE~ 140 (174)
T PF07209_consen 127 NRSPYPMLHLLRED 140 (174)
T ss_pred cCCCchHHHHHHHH
Confidence 88888888887765
No 489
>PRK06498 isocitrate lyase; Provisional
Probab=20.24 E-value=2.7e+02 Score=24.36 Aligned_cols=44 Identities=9% Similarity=0.040 Sum_probs=38.8
Q ss_pred cCCCeeEEEecCCCHHHHHHHHHHHHHHhCCccEEEeCCCCCCC
Q 027828 18 LGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL 61 (218)
Q Consensus 18 ~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~ 61 (218)
.+..+.|+..+--+.+++..+.+.+++.++.--.++||.....+
T Consensus 344 pyADLlW~ET~~P~~~qa~~fa~~Ir~~~P~~~LaYN~SPSFNW 387 (531)
T PRK06498 344 NGADLLWIETEKPHVAQIAGMVNRIREVVPNAKLVYNNSPSFNW 387 (531)
T ss_pred CcCcEEEecCCCCCHHHHHHHHHHHHHHCCCCeEEecCCCCcch
Confidence 36789999999999999999999999999988888888886544
No 490
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=20.23 E-value=3.2e+02 Score=21.67 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=14.7
Q ss_pred HHHHhcCCCeeEEEecCCCHHHHHHHHHHHHHH
Q 027828 13 AALHSLGIPAIGLEGDVRKREDAVRVVESTINH 45 (218)
Q Consensus 13 ~~l~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~ 45 (218)
+.++..|.+++.+..+ .++.....+++.++
T Consensus 105 ~~l~~~Ga~vi~~~~~---~~~~~~~a~~la~~ 134 (304)
T cd01562 105 DATRAYGAEVVLYGED---FDEAEAKARELAEE 134 (304)
T ss_pred HHHHHcCCEEEEeCCC---HHHHHHHHHHHHHh
Confidence 3455556555444432 44444555555544
No 491
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=20.15 E-value=2.3e+02 Score=22.24 Aligned_cols=16 Identities=19% Similarity=0.291 Sum_probs=6.5
Q ss_pred HHHHHHHHHhcCCCee
Q 027828 8 LRSAVAALHSLGIPAI 23 (218)
Q Consensus 8 l~~~~~~l~~~~~~~~ 23 (218)
+++.++++++.+.++.
T Consensus 172 ~~~~v~~lr~~~~D~I 187 (277)
T cd07410 172 AKKYVPKLRAEGADVV 187 (277)
T ss_pred HHHHHHHHHHcCCCEE
Confidence 3344444444333333
No 492
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=20.12 E-value=2.4e+02 Score=20.60 Aligned_cols=28 Identities=21% Similarity=0.280 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhCC--ccEEEeCCCCCC
Q 027828 33 EDAVRVVESTINHFGK--LDILVNAAAGNF 60 (218)
Q Consensus 33 ~~~~~~~~~~~~~~~~--ld~li~~ag~~~ 60 (218)
+++...++++++.++. +=++-||||...
T Consensus 62 ~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~ 91 (168)
T PF09419_consen 62 PEYAEWLNELKKQFGKDRVLIVSNSAGSSD 91 (168)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCccc
Confidence 6788889999999875 777778888644
No 493
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=20.04 E-value=4.1e+02 Score=20.38 Aligned_cols=47 Identities=17% Similarity=0.132 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhcCCCeeEEEecC----CCHHHHHHHHHHHHHHhCCccEEEe
Q 027828 6 TVLRSAVAALHSLGIPAIGLEGDV----RKREDAVRVVESTINHFGKLDILVN 54 (218)
Q Consensus 6 ~~l~~~~~~l~~~~~~~~~~~~D~----s~~~~~~~~~~~~~~~~~~ld~li~ 54 (218)
+...+..+.+++.|.++.+...|+ .+++.+.++++.+.+. ++|.+..
T Consensus 115 ~~~~~~i~~a~~~G~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~--g~~~i~l 165 (265)
T cd03174 115 ENAEEAIEAAKEAGLEVEGSLEDAFGCKTDPEYVLEVAKALEEA--GADEISL 165 (265)
T ss_pred HHHHHHHHHHHHCCCeEEEEEEeecCCCCCHHHHHHHHHHHHHc--CCCEEEe
Confidence 344555666666676665544343 4566677777766654 4665554
Done!