Query 027828
Match_columns 218
No_of_seqs 148 out of 1513
Neff 10.1
Searched_HMMs 29240
Date Tue Mar 26 18:09:40 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/027828.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2196-2200//hhsearch_pdb/027828hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g81_D Putative hexonate dehyd 1.0 1 1 286.7 20.6 210 1-218 39-248 (255)
2 4fn4_A Short chain dehydrogena 1.0 1 1 281.2 24.2 209 1-218 37-248 (254)
3 4fgs_A Probable dehydrogenase 1.0 1 1 272.6 20.0 204 1-218 59-267 (273)
4 4hp8_A 2-deoxy-D-gluconate 3-d 1.0 1 1 268.6 14.5 202 2-218 40-241 (247)
5 4gkb_A 3-oxoacyl-[acyl-carrier 1.0 1 1 260.7 19.7 205 2-218 38-247 (258)
6 4b79_A PA4098, probable short- 1.0 1 1 256.9 17.2 184 19-218 53-236 (242)
7 4fs3_A Enoyl-[acyl-carrier-pro 1.0 1 1 255.3 20.3 207 1-218 38-249 (256)
8 3ged_A Short-chain dehydrogena 1.0 1 1 251.9 21.1 194 2-218 33-226 (247)
9 4h15_A Short chain alcohol deh 1.0 1 1 246.0 19.5 202 8-218 24-254 (261)
10 4ibo_A Gluconate dehydrogenase 1.0 1 1 241.6 20.0 209 1-218 56-264 (271)
No 1
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=1.00 E-value=1 Score=286.72 Aligned_cols=210 Identities=24% Similarity=0.297 Sum_probs=198.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98868999999999984599835998149998899999999997719943899389888888989999778987775533
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++.+.+.++..++||++++++++++++++.+++|+||++|||||.....++.+.+.++|++++++|+
T Consensus 39 ~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl 118 (255)
T 4g81_D 39 NDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNL 118 (255)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHH
T ss_conf 97987899999999995499689999208999999999999999779986899898889999905599999999999975
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 56999899999999855999988999965999533553247851167688599999999999865348997188665359
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~~i~pG 160 (218)
.++++++|++.|+|++++. .|+||+++|..+..+.+....|+++|+++.+|+|+++.|++ ++|||||+|.||
T Consensus 119 ~g~~~~~~~~~p~m~~~~~-------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~PG 190 (255)
T 4g81_D 119 TSAFLVSRSAAKRMIARNS-------GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWA-QFNIQTNAIGPG 190 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHCCC-------CCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEEEEC
T ss_conf 9999999999999987169-------97799984033258899966599999999999999999966-059599999618
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 4107876688994888785333127889889887899999850687763235221129
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.|++......+++..+.+....|++|+++|+|+|++++||+|+++.|+||++|.+|
T Consensus 191 ~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VD 248 (255)
T 4g81_D 191 YILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVD 248 (255)
T ss_dssp SBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEES
T ss_pred CCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEC
T ss_conf 7977002112688999999985799889839999999999995732279768779979
No 2
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=1.00 E-value=1 Score=281.21 Aligned_cols=209 Identities=24% Similarity=0.377 Sum_probs=191.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CCCCCCCCHHHHHHHHHHH
Q ss_conf 988689999999999845998359981499988999999999977199438993898888-8898999977898777553
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF-LVPAEDLSPNGFRTVIEID 79 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n 79 (218)
++|+.++++++.+++++.|.++..++||+++.++++++++++.+++|+||++|||||+.. ..++.+.+.++|++++++|
T Consensus 37 ~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vN 116 (254)
T 4fn4_A 37 VELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVN 116 (254)
T ss_dssp EESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHH
T ss_conf 97998999999999983599589998258999999999999999809997999898665779981559999999999997
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
Q ss_conf 35699989999999985599998899996599953355324785116768859999999999986534899718866535
Q 027828 80 SVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAP 159 (218)
Q Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~~i~p 159 (218)
+.++++++|+++|+|++++ .|+||+++|..+..+.++...|+++|+++.+|+|+++.|++ ++|||||+|.|
T Consensus 117 l~g~~~~~~~~~p~m~~~~--------~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr~lA~ela-~~gIrVN~V~P 187 (254)
T 4fn4_A 117 LYSAFYSSRAVIPIMLKQG--------KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYG-DQGIRAVAVLP 187 (254)
T ss_dssp THHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHCC--------CCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHCEEEEEEEE
T ss_conf 5999999999999999859--------92899981465457888975899999999999999999961-42949999974
Q ss_pred CCCCCCCCCCCCCHH--HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 941078766889948--88785333127889889887899999850687763235221129
Q 027828 160 GPIKDTAGVSKLAPE--EIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 160 G~i~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|+++|++......++ ..........|++|+++|+|+|++++||+|+++.|+||++|.+|
T Consensus 188 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VD 248 (254)
T 4fn4_A 188 GTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVD 248 (254)
T ss_dssp CSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEC
T ss_conf 7897745223468858899999753787789749999999999995824369758878959
No 3
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=1.00 E-value=1 Score=272.64 Aligned_cols=204 Identities=27% Similarity=0.391 Sum_probs=187.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98868999999999984599835998149998899999999997719943899389888888989999778987775533
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++++++ +.++..++||+++.++++++++++.+++|+||++|||||.....++.+.+.++|++.+++|+
T Consensus 59 ~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl 135 (273)
T 4fgs_A 59 TGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNV 135 (273)
T ss_dssp EESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHC---CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHH
T ss_conf 979889999999981---99769999407999999999999999809999999899899887711266999999999985
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 56999899999999855999988999965999533553247851167688599999999999865348997188665359
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~~i~pG 160 (218)
.++++++|+++|.|++ .|+||+++|..+..+.+....|+++|+|+.+|+|+++.|++ ++|||||+|.||
T Consensus 136 ~g~~~~~~~~~p~m~~----------~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVN~V~PG 204 (273)
T 4fgs_A 136 KGVLFTVQKALPLLAR----------GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLK-DRGIRINTLSPG 204 (273)
T ss_dssp HHHHHHHHHHTTTEEE----------EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTT-TSCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHH----------CCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEEEEC
T ss_conf 9999999999999751----------88699996454446888863899999999999999999964-019699999628
Q ss_pred CCCCCCCCCCCCH-----HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 4107876688994-----888785333127889889887899999850687763235221129
Q 027828 161 PIKDTAGVSKLAP-----EEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~i~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+++|++....... +...+.+....|++|+++|+|+|++++||+|+++.|+||++|.+|
T Consensus 205 ~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VD 267 (273)
T 4fgs_A 205 PTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVD 267 (273)
T ss_dssp SBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred CCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEC
T ss_conf 798726777601480326999999984699889829999999999995853248248747578
No 4
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=1.00 E-value=1 Score=268.57 Aligned_cols=202 Identities=27% Similarity=0.267 Sum_probs=183.1
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 88689999999999845998359981499988999999999977199438993898888889899997789877755335
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.. +++.+++.+.+.++..+.||++++++++.+++ +++||++|||||+....++.+.+.++|++++++|+.
T Consensus 40 ~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~ 112 (247)
T 4hp8_A 40 ARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLK 112 (247)
T ss_dssp ESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTH
T ss_pred ECCCH--HHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH-----HCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 58847--99999999719948999822799999999998-----099988998998889888101669999999999738
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 69998999999998559999889999659995335532478511676885999999999998653489971886653594
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~~i~pG~ 161 (218)
++++++|++.|+|++++. .|+||+++|..+..+.++...|+++|+++.+|+|+++.|++ ++|||||+|.||+
T Consensus 113 g~f~~~~~~~~~m~~~g~-------~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~ 184 (247)
T 4hp8_A 113 ALFFTTQAFAKELLAKGR-------SGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWA-AKGINVNAIAPGY 184 (247)
T ss_dssp HHHHHHHHHHHHHHHHTC-------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHCC-------CCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HCCEEEEEEEECC
T ss_conf 999999999999998189-------96799990443377899975799999999999999999970-3094999996498
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 107876688994888785333127889889887899999850687763235221129
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++|++......++...+.+....|++|+++|+|+|.+++||+|+++.|+||+.|.+|
T Consensus 185 i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VD 241 (247)
T 4hp8_A 185 IETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVD 241 (247)
T ss_dssp BCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred CCCCCHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEC
T ss_conf 987632100469999999995799899869999999999994832269758769979
No 5
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=1.00 E-value=1 Score=260.66 Aligned_cols=205 Identities=26% Similarity=0.252 Sum_probs=180.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 88689999999999845998359981499988999999999977199438993898888889899997789877755335
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.+.. +..+++.+.+.++..+.||+++.++++++++++.+++|+||++|||||+....+ .+.+.++|+..+++|+.
T Consensus 38 ~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~-~~~~~e~~~~~~~vNl~ 115 (258)
T 4gkb_A 38 ARHAPDG-AFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIG-LDAGRDAFVASLERNLI 115 (258)
T ss_dssp ESSCCCH-HHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCC-TTSCHHHHHHHHHHHTH
T ss_pred ECCCCCH-HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC-CCCCHHHHHHHHHHHHH
T ss_conf 7880148-999999853997799995369999999999999998099989998998798777-66999999999999829
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 69998999999998559999889999659995335532478511676885999999999998653489971886653594
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~~i~pG~ 161 (218)
+++.++|++.|+|+++ +|+||+++|..+..+.++...|+++|+++.+|+|+++.|++ ++|||||+|.||+
T Consensus 116 g~~~~~~~~~p~m~~~---------~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela-~~gIrVN~V~PG~ 185 (258)
T 4gkb_A 116 HYYAMAHYCVPHLKAT---------RGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALR-EHGVRVNAVIPAE 185 (258)
T ss_dssp HHHHHHHHHHHHHHHH---------TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTCEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHC---------CCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEEECCC
T ss_conf 9999999999999866---------97099996554326777765779999999999999999866-3690899996188
Q ss_pred CCCCCCCCCCC----HHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 10787668899----488878533312788-9889887899999850687763235221129
Q 027828 162 IKDTAGVSKLA----PEEIRSKATDYMAAY-KFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 i~t~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++...... ++..........|++ |+++|+|+|++++||+|+++.|+||++|.+|
T Consensus 186 i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VD 247 (258)
T 4gkb_A 186 VMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVD 247 (258)
T ss_dssp BCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEC
T ss_conf 98745765542224709999999955998778869999999999995734359658768979
No 6
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=1.00 E-value=1 Score=256.88 Aligned_cols=184 Identities=28% Similarity=0.300 Sum_probs=169.4
Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99835998149998899999999997719943899389888888989999778987775533569998999999998559
Q 027828 19 GIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSVGTFIMCHEALKYLKKGG 98 (218)
Q Consensus 19 ~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 98 (218)
+.++..+.||+++.++++++++ ++|+||++|||||+.. ++.+.+.++|++++++|+.++++++|++.|.|+++
T Consensus 53 ~~~~~~~~~Dv~~~~~v~~~~~----~~g~iDiLVNNAGi~~--~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~- 125 (242)
T 4b79_A 53 HPRIRREELDITDSQRLQRLFE----ALPRLDVLVNNAGISR--DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR- 125 (242)
T ss_dssp CTTEEEEECCTTCHHHHHHHHH----HCSCCSEEEECCCCCC--GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEEECCCCHHHHHHHHH----HCCCCCEEEECCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf 4976899902799999999999----6499989998999999--83308999999999996399999999999999976-
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH
Q ss_conf 99988999965999533553247851167688599999999999865348997188665359410787668899488878
Q 027828 99 RGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGPIKDTAGVSKLAPEEIRS 178 (218)
Q Consensus 99 ~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~~i~pG~i~t~~~~~~~~~~~~~~ 178 (218)
.|+||+++|..+..+.++...|+++|+++.+|+|+++.|++ ++|||||+|.||+++|++......+++..+
T Consensus 126 --------~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela-~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~ 196 (242)
T 4b79_A 126 --------GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYA-AERIRVNAIAPGWIDTPLGAGLKADVEATR 196 (242)
T ss_dssp --------CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEECSBCCC-----CCCHHHHH
T ss_pred --------CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HCCEEEEEEEECCCCCHHHHCCCCCHHHHH
T ss_conf --------98699984002167899977899999999999999999961-409189999728897732320368999999
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 5333127889889887899999850687763235221129
Q 027828 179 KATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 179 ~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
.+....|++|+++|+|+|++++||+|+++.|+||++|.+|
T Consensus 197 ~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VD 236 (242)
T 4b79_A 197 RIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVD 236 (242)
T ss_dssp HHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEES
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEC
T ss_conf 9985699889819999999999996852259668458878
No 7
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=1.00 E-value=1 Score=255.31 Aligned_cols=207 Identities=23% Similarity=0.211 Sum_probs=189.6
Q ss_pred CCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCC----CCCCCCCHHHHHHH
Q ss_conf 9886899999999998459-983599814999889999999999771994389938988888----89899997789877
Q 027828 1 MGRRKTVLRSAVAALHSLG-IPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFL----VPAEDLSPNGFRTV 75 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~-~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~----~~~~~~~~~~~~~~ 75 (218)
++|+.+.++++.+++.+.+ .++..++||+++++++.++++++.+++|++|++|||+|+... .++.+.+.++|...
T Consensus 38 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 117 (256)
T 4fs3_A 38 TYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLA 117 (256)
T ss_dssp EESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 97988889999999986589968999812899999999999999984897889740210365333466210789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 75533569998999999998559999889999659995335532478511676885999999999998653489971886
Q 027828 76 IEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVN 155 (218)
Q Consensus 76 ~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~ 155 (218)
+++|+.+++.+++.+.+.+.+ .|+||+++|..+..+.++...|+++|+++.+|+|+++.|++ ++|||||
T Consensus 118 ~~vn~~~~~~~~~~~~~~~~~----------~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela-~~gIrVN 186 (256)
T 4fs3_A 118 QDISSYSLTIVAHEAKKLMPE----------GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLG-PDNIRVN 186 (256)
T ss_dssp HHHHTHHHHHHHHHHHTTCTT----------CEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHG-GGTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCC----------CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCEEEE
T ss_conf 987779999999999997354----------88899982243236756623668888888887999999967-4680999
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 653594107876688994888785333127889889887899999850687763235221129
Q 027828 156 GIAPGPIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 156 ~i~pG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+|.||++.|++.......++..+.+....|++|+++|+|+|++++||+|+++.|+||++|.+|
T Consensus 187 ~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VD 249 (256)
T 4fs3_A 187 AISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVD 249 (256)
T ss_dssp EEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred EEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEC
T ss_conf 995297987445415688899999985699889969999999999995741259568888889
No 8
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=1.00 E-value=1 Score=251.91 Aligned_cols=194 Identities=22% Similarity=0.217 Sum_probs=174.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 88689999999999845998359981499988999999999977199438993898888889899997789877755335
Q 027828 2 GRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDSV 81 (218)
Q Consensus 2 ~R~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~ 81 (218)
+|+.++++++ .+.+.++..++||+++.++++++++++.+++|+||++|||||.....++.+.+.++|++++++|+.
T Consensus 33 ~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~ 108 (247)
T 3ged_A 33 DIDEKRSADF----AKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLK 108 (247)
T ss_dssp ESCHHHHHHH----HTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTH
T ss_pred ECCHHHHHHH----HHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6988999999----972698799990379999999999999997499879998998999998001999999999999749
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
Q ss_conf 69998999999998559999889999659995335532478511676885999999999998653489971886653594
Q 027828 82 GTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPGP 161 (218)
Q Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~~i~pG~ 161 (218)
+++.++|++.|+|.++ +|+||+++|..+..+.+....|+++|+++.+|+|+++.|++ + |||||+|.||+
T Consensus 109 g~~~~~~~~~~~m~~~---------~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela-~-~IrVN~I~PG~ 177 (247)
T 3ged_A 109 APYELSRLCRDELIKN---------KGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLG-P-DVLVNCIAPGW 177 (247)
T ss_dssp HHHHHHHHHHHHHHHT---------TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHT-T-TSEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHC---------CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-C-CCEEEEEECCC
T ss_conf 9999999999987655---------88489995531236899977999999999999999999978-9-99899995586
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 107876688994888785333127889889887899999850687763235221129
Q 027828 162 IKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 162 i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
+.|++... ..+......|++|+++|+|+|++++||+|+ +|+||++|.+|
T Consensus 178 i~t~~~~~------~~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VD 226 (247)
T 3ged_A 178 INVTEQQE------FTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVD 226 (247)
T ss_dssp BCCCC---------CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEES
T ss_pred CCCCCCHH------HHHHHHHCCCCCCCCCHHHHHHHHHHHHHC--CCCCCCEEEEC
T ss_conf 87877487------899999569988982999999999999807--99888858979
No 9
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=1.00 E-value=1 Score=246.03 Aligned_cols=202 Identities=19% Similarity=0.224 Sum_probs=174.1
Q ss_pred HHHHHHHHHHCCC--------------CEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCC--CCCCCCCCHHH
Q ss_conf 9999999984599--------------8359981499988999999999977199438993898888--88989999778
Q 027828 8 LRSAVAALHSLGI--------------PAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNF--LVPAEDLSPNG 71 (218)
Q Consensus 8 l~~~~~~l~~~~~--------------~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~--~~~~~~~~~~~ 71 (218)
...+++.|.+.|. +...+++|+++.++++.+++++.+++|++|++|||||... ..++.+.+.++
T Consensus 24 G~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~ 103 (261)
T 4h15_A 24 GAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDD 103 (261)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHH
T ss_conf 99999999986999999978850278867999858999999999999999972998899989998766899802099999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9877755335699989999999985599998899996599953355324785-116768859999999999986534899
Q 027828 72 FRTVIEIDSVGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATW-YQIHVSAAKAAVDSITRSLALEWGTDY 150 (218)
Q Consensus 72 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~sk~a~~~~~~~la~e~~~~~ 150 (218)
|++.+++|+.++++++|+++|+|++++ .|+||+++|..+..+.+ +...|+++|+|+.+|+++++.|++ ++
T Consensus 104 ~~~~~~vNl~g~~~~~~~~~p~m~~~~--------~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela-~~ 174 (261)
T 4h15_A 104 WYNELSLNLFAAVRLDRQLVPDMVARG--------SGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVS-PK 174 (261)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHG-GG
T ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHCC--------CCEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_conf 999999981899999986150135349--------836999975421568887518999999999999999999951-42
Q ss_pred CEEEEEEECCCCCCCCCCCCC---------C---HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 718866535941078766889---------9---4888785333127889889887899999850687763235221129
Q 027828 151 AIRVNGIAPGPIKDTAGVSKL---------A---PEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 151 gi~v~~i~pG~i~t~~~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
|||||+|.||+++|++..... . ............|++|+++|+|+|++++||+|+++.|+||++|.+|
T Consensus 175 gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VD 254 (261)
T 4h15_A 175 GVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTID 254 (261)
T ss_dssp TEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCEEEEC
T ss_conf 91899995798378415566577887615656668999987753789889759999999999995835359148389989
No 10
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=1.00 E-value=1 Score=241.64 Aligned_cols=209 Identities=22% Similarity=0.308 Sum_probs=192.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98868999999999984599835998149998899999999997719943899389888888989999778987775533
Q 027828 1 MGRRKTVLRSAVAALHSLGIPAIGLEGDVRKREDAVRVVESTINHFGKLDILVNAAAGNFLVPAEDLSPNGFRTVIEIDS 80 (218)
Q Consensus 1 ~~R~~~~l~~~~~~l~~~~~~~~~~~~Dls~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~ 80 (218)
++|+.++++++.+++.+.+.++.++.+|+++.+++.++++++.++++++|++|||||.....++.+.+.++|+..+++|+
T Consensus 56 ~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~ 135 (271)
T 4ibo_A 56 NGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNL 135 (271)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHH
T ss_conf 94988999999999984099669998279999999999999999779998899899998989901299999999999972
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
Q ss_conf 56999899999999855999988999965999533553247851167688599999999999865348997188665359
Q 027828 81 VGTFIMCHEALKYLKKGGRGQASSSSGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSLALEWGTDYAIRVNGIAPG 160 (218)
Q Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~e~~~~~gi~v~~i~pG 160 (218)
.+++.+++++.|.|++++ .|+||++||..+..+.++...|+++|+++.++++.++.|++ ++||+||+|.||
T Consensus 136 ~g~~~l~~~~~~~~~~~~--------~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~-~~gI~vn~v~PG 206 (271)
T 4ibo_A 136 TSAFMIGREAAKRMIPRG--------YGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWA-QYGIQANAIGPG 206 (271)
T ss_dssp HHHHHHHHHHHHHHHHHT--------CEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHG-GGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHCC--------CCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHCEEEEEEEEC
T ss_conf 999999999999998569--------91799976478677898863689999999999999999976-629089999745
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 4107876688994888785333127889889887899999850687763235221129
Q 027828 161 PIKDTAGVSKLAPEEIRSKATDYMAAYKFGEKWDIAMAALYLASDAAVHRDLIHLLDD 218 (218)
Q Consensus 161 ~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~a~~~~~L~s~~~~~~~g~~i~~d 218 (218)
++.|++.......+..........|.+++.+|+|+|++++||+++++.+++|+.|.+|
T Consensus 207 ~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vd 264 (271)
T 4ibo_A 207 YMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVD 264 (271)
T ss_dssp SBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEES
T ss_pred CEECCCHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEC
T ss_conf 5707404321357789999872598788859999999999983960059778689989
Done!