BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027829
(218 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXM2|CAF1I_ARATH Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana
GN=CAF1-9 PE=2 SV=1
Length = 280
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/283 (45%), Positives = 162/283 (57%), Gaps = 70/283 (24%)
Query: 1 MSDVPPPQPPKP---RILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSN 57
M+ + P + KP ++ REV+ NL SEFE I +ID YP ISMDTEFPGV+ + S+
Sbjct: 1 MAIIKPNRDLKPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFK--SD 58
Query: 58 IRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSG-STYYIWEFNFKDFDIAR 116
+R +P Y LKANVD L+LIQ+GLTLSD GNLPDLG +IWEFNF+DFD+AR
Sbjct: 59 LRFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVAR 118
Query: 117 HAHALDSVELLKRQ------------------------GLVLNKDVTWVTFHSAYDFG-- 150
AHA DS+ELL+RQ GLV N++V+WVTFHSAYDFG
Sbjct: 119 DAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYL 178
Query: 151 ------------------------------------FCT-CLYGGLDRVCKALGVERVVG 173
FC L+GGLDRV + L V R VG
Sbjct: 179 MKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVG 238
Query: 174 KSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELL 216
K HQAGSDSLLT HAF +++D +F + +K+A VL+GLE+
Sbjct: 239 KCHQAGSDSLLTWHAFQRMRDLYFVQDGP-EKHAGVLYGLEVF 280
>sp|Q9FMS6|CAF1K_ARATH Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis
thaliana GN=CAF1-11 PE=2 SV=1
Length = 278
Score = 206 bits (524), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 157/268 (58%), Gaps = 66/268 (24%)
Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNI-RHRDPAANYNGLKA 72
I+IR+V+ +NL SEF+ IR +++ YP ISMDTEFPGV+ + D ++ R +P YN LK+
Sbjct: 12 IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLKS 71
Query: 73 NVDLLNLIQIGLTLSDEEGNLPDL-GSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQ- 130
NVD L+LIQ+GLTLSD +GNLPDL G + YIWEFNF+DFD+ R HA DS+ELL+R
Sbjct: 72 NVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHG 131
Query: 131 -----------------------GLVLNKDVTWVTFHSAYDFG----------------- 150
GL+ N+ V+WVTFHSAYDFG
Sbjct: 132 IDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALRE 191
Query: 151 ---------------------FCTC-LYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHA 188
FC LYGGLDRV ++L V R VGK HQAGSDSLLT A
Sbjct: 192 FLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQA 251
Query: 189 FLKIKDKHFGNEYELQKYANVLHGLELL 216
F +++D +F E +K+A VL+GLE+
Sbjct: 252 FQRMRDLYF-VEDGAEKHAGVLYGLEVF 278
>sp|Q9LEU4|CAF1J_ARATH Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis
thaliana GN=CAF1-10 PE=2 SV=1
Length = 277
Score = 187 bits (474), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 148/261 (56%), Gaps = 66/261 (25%)
Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKAN 73
I+IREV+++NL+ EF IR ++D++ I+MDTEFPGVV++P + ++ + NY LK N
Sbjct: 10 IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNND-LNYRTLKEN 68
Query: 74 VDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKR---- 129
VDLL LIQ+GLT SDE GNLP G+ + IW+FNF++F+I +A +S+ELL++
Sbjct: 69 VDLLKLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQCGID 127
Query: 130 --------------------QGLVLNKDVTWVTFHSAYDFG------------------- 150
G+VLN ++WVTFH YDFG
Sbjct: 128 FKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFF 187
Query: 151 ------------------FCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKI 192
FC L+GGL+R+ + +GVER VG HQAGSDSLLTL +F K+
Sbjct: 188 KLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKL 246
Query: 193 KDKHFGNEYELQKYANVLHGL 213
K+++F E KY VL+GL
Sbjct: 247 KERYFPGSTE--KYTGVLYGL 265
>sp|Q9S9P2|CAF1B_ARATH Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana
GN=CAF1-2 PE=2 SV=1
Length = 286
Score = 177 bits (450), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 145/280 (51%), Gaps = 70/280 (25%)
Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVR-----PD 55
MS P P+ I IREV+ NL E I ID +P ++MDTEFPG+V + P+
Sbjct: 1 MSQAPNPEEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPN 60
Query: 56 SNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIA 115
N NY+ LKANV++L LIQ+GLTLSDE+GNLP G+ IW+FNF++F++
Sbjct: 61 PNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQ-CIWQFNFREFNVI 119
Query: 116 RHAHALDSVELLKR------------------------QGLVLNKDVTWVTFHSAYDF-- 149
ALDS+ELL++ G+VLN + WVTFH YDF
Sbjct: 120 SDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGY 179
Query: 150 -----------------------------------GFCTCLYGGLDRVCKALGVERVVGK 174
GFCT LYGGL+++ + LGV+R VG
Sbjct: 180 LLKLLSGKELPEEISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGI 238
Query: 175 SHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLE 214
SHQAGSDSLLTL F+K+K+ F L KY+ L GL+
Sbjct: 239 SHQAGSDSLLTLRTFIKMKEFFFTG--SLLKYSGFLFGLD 276
>sp|Q9SKZ2|CAF1G_ARATH Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana
GN=CAF1-7 PE=2 SV=2
Length = 275
Score = 174 bits (440), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 142/261 (54%), Gaps = 65/261 (24%)
Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKAN 73
I IREV+ NL SE IR ++D +P ++MDTEFPG+V RP + + +Y LK N
Sbjct: 10 IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFK-TNTEYHYETLKTN 68
Query: 74 VDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKR---- 129
V++L +IQ+GLT SDE+GNLP G+ + Y IW+FNF++FD+ +A DS+ELL++
Sbjct: 69 VNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGID 128
Query: 130 --------------------QGLVLNKDVTWVTFHSAYDFG------------------- 150
G+VLN++V WVTFHS YDFG
Sbjct: 129 FVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFF 188
Query: 151 ------------------FCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKI 192
FC L+GGL+++ + L VER VG HQAGSDSLLT F K+
Sbjct: 189 EMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKL 247
Query: 193 KDKHFGNEYELQKYANVLHGL 213
++ F ++KY+ VL+GL
Sbjct: 248 QENFFIG--SMEKYSGVLYGL 266
>sp|Q9SAI2|CAF1F_ARATH Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana
GN=CAF1-6 PE=2 SV=1
Length = 274
Score = 169 bits (429), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 141/261 (54%), Gaps = 66/261 (25%)
Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKAN 73
I IREV+ NL E + IR ++D +P ++MDTEFPG+VVRP + + +Y LK N
Sbjct: 10 IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK-SNADYHYETLKTN 68
Query: 74 VDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKR---- 129
V++L +IQ+GLT S+E+GNLP G+ Y IW+FNF++FD+ ALDS+ELLK+
Sbjct: 69 VNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQSGID 127
Query: 130 --------------------QGLVLNKDVTWVTFHSAYDFG------------------- 150
G+VLN++V WVTFHS YDFG
Sbjct: 128 LAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFF 187
Query: 151 ------------------FCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKI 192
FC L+GGL+++ + L VER VG HQAGSDSLLT F K+
Sbjct: 188 KLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKL 246
Query: 193 KDKHFGNEYELQKYANVLHGL 213
K+ F L KY+ VL+GL
Sbjct: 247 KENFFVG--PLHKYSGVLYGL 265
>sp|O74856|CAF1_SCHPO Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=caf1 PE=1 SV=2
Length = 335
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 125/259 (48%), Gaps = 70/259 (27%)
Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVD 75
IR+V+ NL E I +LI+RYP++SMDTEFPGVV RP + D +Y L+ANVD
Sbjct: 25 IRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSD-DYHYQTLRANVD 83
Query: 76 LLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKR------ 129
L +IQIGL LSDEEGN P W+FNF F++ +A +S+ELL +
Sbjct: 84 SLKIIQIGLALSDEEGNAPVEAC-----TWQFNFT-FNLQDDMYAPESIELLTKSGIDFK 137
Query: 130 ------------------QGLVLNKDVTWVTFHSAYDFGF-------------------C 152
GLVL ++VTW+TFHS YDF +
Sbjct: 138 KHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFYKI 197
Query: 153 TCLY------------------GGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKD 194
C+Y GL + L + R +G HQAGSD+LLT F +I+
Sbjct: 198 LCIYFPKNYDIKYIMKSVLNNSKGLQDIADDLQIHR-IGPQHQAGSDALLTARIFFEIRS 256
Query: 195 KHFGNEYELQKYANVLHGL 213
++F + + N L+GL
Sbjct: 257 RYFDGSID-SRMLNQLYGL 274
>sp|Q60809|CNOT7_MOUSE CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7
PE=1 SV=1
Length = 285
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 123/259 (47%), Gaps = 69/259 (26%)
Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVD 75
I EV+ NL E ++IR +I +Y ++MDTEFPGVV RP R + Y L+ NVD
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFR-SNADYQYQLLRCNVD 70
Query: 76 LLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGL--- 132
LL +IQ+GLT +E+G P S W+FNFK F++ +A DS+ELL G+
Sbjct: 71 LLKIIQLGLTFMNEQGEYPPGTS-----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFK 124
Query: 133 ---------------------VLNKDVTWVTFHSAYDFGF-------------------- 151
VL + V W++FHS YDFG+
Sbjct: 125 KHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184
Query: 152 -----------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKD 194
C L GGL V + L +ER +G HQAGSDSLLT AF K+++
Sbjct: 185 LRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMRE 243
Query: 195 KHFGNEYELQKYANVLHGL 213
F + + KY L+GL
Sbjct: 244 MFFEDHIDDAKYCGHLYGL 262
>sp|Q3ZC01|CNOT7_BOVIN CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7
PE=2 SV=1
Length = 285
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 123/259 (47%), Gaps = 69/259 (26%)
Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVD 75
I EV+ NL E ++IR +I +Y ++MDTEFPGVV RP R + Y L+ NVD
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFR-SNADYQYQLLRCNVD 70
Query: 76 LLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGL--- 132
LL +IQ+GLT +E+G P S W+FNFK F++ +A DS+ELL G+
Sbjct: 71 LLKIIQLGLTFMNEQGEYPPGTS-----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFK 124
Query: 133 ---------------------VLNKDVTWVTFHSAYDFGF-------------------- 151
VL + V W++FHS YDFG+
Sbjct: 125 KHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184
Query: 152 -----------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKD 194
C L GGL V + L +ER +G HQAGSDSLLT AF K+++
Sbjct: 185 LRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMRE 243
Query: 195 KHFGNEYELQKYANVLHGL 213
F + + KY L+GL
Sbjct: 244 MFFEDHIDDAKYCGHLYGL 262
>sp|Q3KQ85|CNOT7_XENLA CCR4-NOT transcription complex subunit 7 OS=Xenopus laevis GN=cnot7
PE=2 SV=1
Length = 285
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 123/259 (47%), Gaps = 69/259 (26%)
Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVD 75
I EV+ NL + +RIR +I +Y ++MDTEFPGVV RP R + Y L+ NVD
Sbjct: 12 ICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFR-SNADYQYQLLRCNVD 70
Query: 76 LLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGL--- 132
LL +IQ+GLT +E+G P S W+FNFK F++ +A DS+ELL G+
Sbjct: 71 LLKIIQLGLTFMNEQGEYPPGTS-----TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFK 124
Query: 133 ---------------------VLNKDVTWVTFHSAYDFGF-------------------- 151
VL + V W++FHS YDFG+
Sbjct: 125 KHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVEQDFFEI 184
Query: 152 -----------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKD 194
C L GGL V + L +ER +G HQAGSDSLLT AF K+++
Sbjct: 185 LRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMRE 243
Query: 195 KHFGNEYELQKYANVLHGL 213
F + + KY L+GL
Sbjct: 244 MFFEDHIDDAKYCGHLYGL 262
>sp|Q9UIV1|CNOT7_HUMAN CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7
PE=1 SV=3
Length = 285
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 123/259 (47%), Gaps = 69/259 (26%)
Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVD 75
I EV+ NL E ++IR +I +Y ++MDTEFPGVV RP R + Y L+ NVD
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFR-SNADYQYQLLRCNVD 70
Query: 76 LLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGL--- 132
LL +IQ+GLT +E+G P S W+FNFK F++ +A DS+ELL G+
Sbjct: 71 LLKIIQLGLTFMNEQGEYPPGTS-----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFK 124
Query: 133 ---------------------VLNKDVTWVTFHSAYDFGF-------------------- 151
VL + V W++FHS YDFG+
Sbjct: 125 KHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184
Query: 152 -----------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKD 194
C L GGL V + L +ER +G HQAGSDSLLT AF K+++
Sbjct: 185 LRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMRE 243
Query: 195 KHFGNEYELQKYANVLHGL 213
F + + KY L+GL
Sbjct: 244 MFFEDHIDDAKYCGHLYGL 262
>sp|Q5ZJV9|CNOT7_CHICK CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7
PE=2 SV=1
Length = 285
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 123/259 (47%), Gaps = 69/259 (26%)
Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVD 75
I EV+ NL E ++IR +I +Y ++MDTEFPGVV RP R + Y L+ NVD
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFR-SNADYQYQLLRCNVD 70
Query: 76 LLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGL--- 132
LL +IQ+GLT +E+G P S W+FNFK F++ +A DS+ELL G+
Sbjct: 71 LLKIIQLGLTFMNEQGEYPPGTS-----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFK 124
Query: 133 ---------------------VLNKDVTWVTFHSAYDFGF-------------------- 151
VL + V W++FHS YDFG+
Sbjct: 125 KHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEI 184
Query: 152 -----------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKD 194
C L GGL V + L +ER +G HQAGSDSLLT AF K+++
Sbjct: 185 LRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMRE 243
Query: 195 KHFGNEYELQKYANVLHGL 213
F + + KY L+GL
Sbjct: 244 MFFEDHIDDAKYCGHLYGL 262
>sp|Q08BM8|CNOT7_DANRE CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7
PE=2 SV=1
Length = 286
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 122/259 (47%), Gaps = 69/259 (26%)
Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVD 75
I EV+ NL E +RIR + ++ I+MDTEFPGVV RP R + Y L+ NVD
Sbjct: 12 ICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFR-SNADYQYQLLRCNVD 70
Query: 76 LLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGL--- 132
LL +IQ+GLT +E+G P S W+FNFK F++ +A DS+ELL G+
Sbjct: 71 LLKIIQLGLTFMNEQGEYPPGTS-----TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFK 124
Query: 133 ---------------------VLNKDVTWVTFHSAYDFGF-------------------- 151
VL + V W++FHS YDFG+
Sbjct: 125 KHEEEGIETMYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILSNSKLPDEEVDFFEI 184
Query: 152 -----------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKD 194
C L GGL V + L +ER +G HQAGSDSLLT AF K+++
Sbjct: 185 LRLFFPIIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMRE 243
Query: 195 KHFGNEYELQKYANVLHGL 213
F + + KY L+GL
Sbjct: 244 MFFEDHIDDAKYCGHLYGL 262
>sp|Q9UFF9|CNOT8_HUMAN CCR4-NOT transcription complex subunit 8 OS=Homo sapiens GN=CNOT8
PE=1 SV=1
Length = 292
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 125/269 (46%), Gaps = 69/269 (25%)
Query: 6 PPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAA 65
P + +I EV+ NL E +IR ++ Y I+MDTEFPGVVVRP R
Sbjct: 2 PAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFR-SSIDY 60
Query: 66 NYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVE 125
Y L+ NVDLL +IQ+GLT ++E+G P S W+FNFK F++ ++ DS++
Sbjct: 61 QYQLLRCNVDLLKIIQLGLTFTNEKGEYP-----SGINTWQFNFK-FNLTEDMYSQDSID 114
Query: 126 LLKRQGL------------------------VLNKDVTWVTFHSAYDFGF---------- 151
LL GL VL +V W++FHS YDFG+
Sbjct: 115 LLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRL 174
Query: 152 ---------------------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLL 184
C L GGL V L ++R +G+ HQAGSDSLL
Sbjct: 175 PEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLL 233
Query: 185 TLHAFLKIKDKHFGNEYELQKYANVLHGL 213
T AF ++K+ F + + KY L+GL
Sbjct: 234 TGMAFFRMKELFFEDSIDDAKYCGRLYGL 262
>sp|Q9D8X5|CNOT8_MOUSE CCR4-NOT transcription complex subunit 8 OS=Mus musculus GN=Cnot8
PE=2 SV=1
Length = 292
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/269 (33%), Positives = 125/269 (46%), Gaps = 69/269 (25%)
Query: 6 PPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAA 65
P + +I EV+ NL E +IR ++ Y I+MDTEFPGVVVRP R
Sbjct: 2 PAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFR-SSIDY 60
Query: 66 NYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVE 125
Y L+ NVDLL +IQ+GLT ++E+G P S W+FNFK F++ ++ DS++
Sbjct: 61 QYQLLRCNVDLLKIIQLGLTFTNEKGEYP-----SGINTWQFNFK-FNLTEDMYSQDSID 114
Query: 126 LLKRQGL------------------------VLNKDVTWVTFHSAYDFGF---------- 151
LL GL VL +V W++FHS YDFG+
Sbjct: 115 LLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRL 174
Query: 152 ---------------------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLL 184
C L GGL V L ++R +G+ HQAGSDSLL
Sbjct: 175 PEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLL 233
Query: 185 TLHAFLKIKDKHFGNEYELQKYANVLHGL 213
T AF ++K+ F + + KY L+GL
Sbjct: 234 TGMAFFRMKELFFEDSIDDAKYCGRLYGL 262
>sp|A4II96|CNOT7_XENTR CCR4-NOT transcription complex subunit 7 OS=Xenopus tropicalis
GN=cnot7 PE=2 SV=1
Length = 285
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 123/259 (47%), Gaps = 69/259 (26%)
Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVD 75
I EV+ NL + +RIR +I +Y ++MDTEFPGVV RP R + Y L+ NVD
Sbjct: 12 ICEVWACNLDDQMKRIRQVIRKYNYVAMDTEFPGVVARPIGEFR-SNADYQYQLLRCNVD 70
Query: 76 LLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGL--- 132
LL +IQ+GLT +E+G P S W+FNFK F++ +A DS+ELL G+
Sbjct: 71 LLKIIQLGLTFVNEQGEYPPGTS-----TWQFNFK-FNLTEDMYAQDSIELLTSSGIQFK 124
Query: 133 ---------------------VLNKDVTWVTFHSAYDFGF-------------------- 151
VL + V W++FHS YDFG+
Sbjct: 125 KHEEEGIETQYFAELFMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEVELDFFEI 184
Query: 152 -----------------CTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKD 194
C L GGL V + L ++R +G HQAGSDSLLT AF K+++
Sbjct: 185 LRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELKR-IGPQHQAGSDSLLTGMAFFKMRE 243
Query: 195 KHFGNEYELQKYANVLHGL 213
F + + KY L+GL
Sbjct: 244 MFFEDHIDDAKYCGHLYGL 262
>sp|Q17345|CNOT7_CAEEL CCR4-NOT transcription complex subunit 7 OS=Caenorhabditis elegans
GN=ccf-1 PE=2 SV=1
Length = 310
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 116/255 (45%), Gaps = 73/255 (28%)
Query: 12 PRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLK 71
P + I V+ N+ EF RIR ++ YP ++MDTEFPGVV P R ++ NY +
Sbjct: 19 PEVKIHNVYMSNVEEEFARIRGFVEDYPYVAMDTEFPGVVATPLGTFRSKED-FNYQQVF 77
Query: 72 ANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKR-- 129
NV++L LIQ+G + +++G LP G +W+FNF +F A + +SVE+L++
Sbjct: 78 CNVNMLKLIQVGFAMVNDKGELPPTGD-----VWQFNF-NFSFAEDMFSHESVEMLRQAG 131
Query: 130 ----------------------QGLVLNKDVTWVTFHSAYDFG----------------- 150
GL+ + +TW+TF S YDFG
Sbjct: 132 IDFTLLQNNGIPTAVFGELLTTSGLITDPRITWLTFSSGYDFGYLLKSITLGDLPKEEST 191
Query: 151 FCTC------------------------LYGGLDRVCKALGVERVVGKSHQAGSDSLLTL 186
F C L GGL V L V+R G HQAGSD+LLT
Sbjct: 192 FFMCHKTLFPTSFDIKILLRTPNCASAKLKGGLQEVADQLDVKR-QGVRHQAGSDALLTA 250
Query: 187 HAFLKIKDKHFGNEY 201
F KIK + FG+ +
Sbjct: 251 ATFFKIKKQFFGDNW 265
>sp|P39008|POP2_YEAST Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=POP2 PE=1 SV=2
Length = 433
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 93/168 (55%), Gaps = 30/168 (17%)
Query: 9 PPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYN 68
PP + +R+V++ NL SEF IR L+ +Y +S+ TEF G + RP R + +Y
Sbjct: 153 PPPNYLFVRDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGTFRSKV-DYHYQ 211
Query: 69 GLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLK 128
++ANVD LN IQ+GL+LSD GN PD G + W+FNF +FD + + +S+ELL+
Sbjct: 212 TMRANVDFLNPIQLGLSLSDANGNKPDNGPST----WQFNF-EFDPKKEIMSTESLELLR 266
Query: 129 R------------------------QGLVLNKDVTWVTFHSAYDFGFC 152
+ GL+++ VTW+T+H+AYD GF
Sbjct: 267 KSGINFEKHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFL 314
>sp|Q9SHJ0|CAF1A_ARATH Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana
GN=CAF1-1 PE=2 SV=1
Length = 360
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 103/245 (42%), Gaps = 80/245 (32%)
Query: 15 LIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAAN--YNGLKA 72
L R V+ N+ E R+ + R+P+I+ DTE+PG++ R + D +++ Y +K
Sbjct: 8 LARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFR-----TYFDSSSDECYRAMKG 62
Query: 73 NVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGL 132
NV+ LIQ G TL + +G + +WE NF +F S+E L+R GL
Sbjct: 63 NVENTKLIQCGFTLFNAKGEIGG--------VWEINFSNFGDPSDTRNELSIEFLRRHGL 114
Query: 133 VL-------------------------NKDVTWVTFHSAYDF------------------ 149
L K V +VTF AYDF
Sbjct: 115 DLQKIRDEGVDMFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGE 174
Query: 150 -------------------GFCTCL--YGGLDRVCKALGVERVVGKSHQAGSDSLLTLHA 188
GFC L + GL ++ + L + R VG++H AGSDSL+T
Sbjct: 175 FATEVVKVFGQVYDTKVMAGFCEGLGEHLGLSKLAQLLQITR-VGRAHHAGSDSLMTALV 233
Query: 189 FLKIK 193
F+K+K
Sbjct: 234 FIKLK 238
>sp|O64773|CAF1E_ARATH Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana
GN=CAF1-5 PE=2 SV=1
Length = 278
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 94/243 (38%), Gaps = 86/243 (35%)
Query: 18 EVFEFNLISEFERIRALIDRYPIISMDTEFPGVV----VRPDSNIRHRDPAANYNGLKAN 73
EV+ +N +E IR + I++DTEFPG + + IR+RD +K N
Sbjct: 4 EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRD-------MKFN 56
Query: 74 VDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGLV 133
VD +LIQ+GLTL G G T WE N DF+ ++ S+ LK GL
Sbjct: 57 VDNTHLIQLGLTL---------FGKGIT-KTWEINLSDFNESKSLKNDKSIAFLKNNGLD 106
Query: 134 LNK------------------------DVTWVTFHSAYD--------------------- 148
L+K + WVTF +YD
Sbjct: 107 LDKIREEGIGIEEFFMEFSQILNEKHGKMRWVTFQGSYDKAYLLKGLTRKPLPETSKEFD 166
Query: 149 -----------------FGFCTCLYG--GLDRVCKALGVERVVGKSHQAGSDSLLTLHAF 189
G C+ L GL R+ L + R VGK+H AGSDS LT F
Sbjct: 167 ETVQQLLGRFVYDVKKMAGLCSGLSSRFGLQRIADVLQMRR-VGKAHHAGSDSELTARVF 225
Query: 190 LKI 192
K+
Sbjct: 226 TKL 228
>sp|Q9C6M9|CAF1D_ARATH Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana
GN=CAF1-4 PE=1 SV=1
Length = 302
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 93/244 (38%), Gaps = 86/244 (35%)
Query: 18 EVFEFNLISEFERIRALIDRYPIISMDTEFPGVV----VRPDSNIRHRDPAANYNGLKAN 73
EV+ +N E + IR + + I++DTEFPG + + IR+RD +K N
Sbjct: 3 EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRD-------MKFN 55
Query: 74 VDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGLV 133
VD +LIQ+G TL D G WE N DF+ + S+ LK GL
Sbjct: 56 VDNTHLIQLGFTLFDRRG---------ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLN 106
Query: 134 LNK------------------------DVTWVTFHSAYDFGF------------------ 151
L+K +TWV F +YD +
Sbjct: 107 LDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEF 166
Query: 152 ---------------------CTCLYG--GLDRVCKALGVERVVGKSHQAGSDSLLTLHA 188
C+ L GL R+ L ++R VGK+H AGSDS LT
Sbjct: 167 HETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIADVLQMKR-VGKAHHAGSDSELTARV 225
Query: 189 FLKI 192
F K+
Sbjct: 226 FTKL 229
>sp|Q9SFX6|CAF1C_ARATH Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana
GN=CAF1-3 PE=1 SV=1
Length = 310
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 91/244 (37%), Gaps = 86/244 (35%)
Query: 18 EVFEFNLISEFERIRALIDRYPIISMDTEFPGVV----VRPDSNIRHRDPAANYNGLKAN 73
EV+ +N E IR + I++DTEFPG + + IR+RD +K N
Sbjct: 8 EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRD-------MKFN 60
Query: 74 VDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGLV 133
VD +LIQ+G TL D G WE N DFD + S+ LK GL
Sbjct: 61 VDNTHLIQLGFTLFDRRGFAK---------TWEINLSDFDEHKCFKNDKSIAFLKSNGLN 111
Query: 134 LNK------------------------DVTWVTFHSAYDFGF------------------ 151
L+K +TWV F +YD +
Sbjct: 112 LDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEF 171
Query: 152 ---------------------CTCLYG--GLDRVCKALGVERVVGKSHQAGSDSLLTLHA 188
C+ L GL R+ L ++R VGK+H AGSDS LT
Sbjct: 172 HETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIADVLQMKR-VGKAHHAGSDSELTARV 230
Query: 189 FLKI 192
F K+
Sbjct: 231 FTKL 234
>sp|Q9LXM4|CAF1H_ARATH Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana
GN=CAF1-8 PE=3 SV=1
Length = 239
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 83/218 (38%), Gaps = 76/218 (34%)
Query: 38 YPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLG 97
Y I++DTEFP + +H Y + +VD LIQ+GLTL D G +
Sbjct: 11 YRFIAIDTEFPSTL---RETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRI---- 63
Query: 98 SGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGLVLNK--------------------- 136
G T WE NF DF + A S+E L+R GL L K
Sbjct: 64 -GGT---WEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKK 118
Query: 137 ---DVTWVTFHSAYDF-------------------------------------GFCTCLY 156
++TWVTFH +YD G C L
Sbjct: 119 TRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS 178
Query: 157 G--GLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKI 192
GL+ + G+ R VG +H AGS++ LT F K+
Sbjct: 179 SRLGLETLAHEFGLNR-VGTAHHAGSNNELTAMVFAKV 215
>sp|Q89AP6|APBE_BUCBP Probable thiamine biosynthesis protein ApbE OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=apbE PE=3 SV=1
Length = 341
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 71 KANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEF----------NFKDFDIARHAHA 120
K N +L LI IGL + + NL D+ SG+ IW F + K +A+
Sbjct: 92 KINKNLAKLISIGLLVGKKTNNLLDITSGTLINIWGFGPTSRKHSIPSKKTIKLAQMLTG 151
Query: 121 LDSVELL-KRQGLVLNKDV 138
L+ ++LL +Q L KD+
Sbjct: 152 LNHIKLLINKQQYYLQKDI 170
>sp|Q9HN74|DLDH_HALSA Dihydrolipoyl dehydrogenase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=lpdA PE=3 SV=1
Length = 474
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 150 GFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHA 188
G L GG++++CKA GV + G++ AGSD L +H
Sbjct: 93 GVVDQLTGGVEKLCKANGVNLIEGRAEFAGSDKLRVVHG 131
>sp|Q8Y210|LNT_RALSO Apolipoprotein N-acyltransferase OS=Ralstonia solanacearum (strain
GMI1000) GN=lnt PE=3 SV=1
Length = 523
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 27 EFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTL 86
+ R+RAL P++ VVRPD +++ R P L+A+V + GLT
Sbjct: 438 QISRMRALESGRPMLRATNTGATAVVRPDGSVQARLPVFTLGTLQADVQGMQ----GLTP 493
Query: 87 SDEEGNLP 94
GN P
Sbjct: 494 FVRTGNAP 501
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.142 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,979,258
Number of Sequences: 539616
Number of extensions: 3934002
Number of successful extensions: 9554
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 9440
Number of HSP's gapped (non-prelim): 51
length of query: 218
length of database: 191,569,459
effective HSP length: 113
effective length of query: 105
effective length of database: 130,592,851
effective search space: 13712249355
effective search space used: 13712249355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)