RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 027832
(218 letters)
>2xhi_A N-glycosylase/DNA lyase; lyase-DNA complex, lyase/DNA complex,
separation-OF-function helix-hairpin-helix, DNA repair;
HET: 8OG; 1.55A {Homo sapiens} PDB: 1ko9_A 1lwy_A*
1hu0_A* 1lwv_A* 1lww_A* 2noe_A* 2noh_A* 2nol_A* 1n3c_A*
1fn7_A* 2noz_A* 1yqk_A 1yqr_A* 1yql_A* 1yqm_A* 2noi_A
1ebm_A* 1m3q_A* 1m3h_A* 1n39_A* ...
Length = 360
Score = 157 bits (398), Expect = 5e-47
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 10/220 (4%)
Query: 6 NSPSPLKRPRLTPQPPPTPPNPQTLTTNKPSKWTPLNLTQSELSLPLTFPTGQTFRWKKT 65
+S P P P + P+ W + +SEL L L P+GQ+FRW++
Sbjct: 9 HSQDPNSMPARALLPRRMGHRT---LASTPALWASIPCPRSELRLDLVLPSGQSFRWREQ 65
Query: 66 GPLQYTGPIGPHLISLKHLQNGDVCYHIHT-----SPSEPAAKSALLDFLNMGISLGELW 120
P ++G + + +L + C S P A+ + + ++L +L+
Sbjct: 66 SPAHWSGVLADQVWTLTQTEEQLHCTVYRGDKSQASRPTPDELEAVRKYFQLDVTLAQLY 125
Query: 121 EGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITKMVDFLAS-LGSHL 179
+ + D F E+A+ G R+LRQDP+ECL F+CSSNNNIARIT MV+ L G L
Sbjct: 126 HHWGSVDSHFQEVAQKFQGVRLLRQDPIECLFSFICSSNNNIARITGMVERLCQAFGPRL 185
Query: 180 GNVEGFEFHEFPSLERLSLVS-EVELRNAGFGYRCFAIKT 218
++ +H FPSL+ L+ E LR G GYR +
Sbjct: 186 IQLDDVTYHGFPSLQALAGPEVEAHLRKLGLGYRARYVSA 225
>3i0w_A 8-oxoguanine-DNA-glycosylase; OGG, cacogg, DNA, 8-OXOG, 8OXOG,
glycosylase, cytosine, hydrolase,lyase/DNA complex; HET:
8OG; 1.73A {Clostridium acetobutylicum} PDB: 3i0x_A*
3f10_A* 3f0z_A
Length = 290
Score = 152 bits (385), Expect = 1e-45
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 5/173 (2%)
Query: 46 SELSLPLTFPTGQTFRWKKTGPLQYTGPIGPHLISLKHLQNGDVCYHIHTSPSEPAAKSA 105
L F GQ FRW + Y G ++ ++ + V Y+I +E K+
Sbjct: 19 ENFELKDIFDCGQCFRWHRQENGNYIGIAFEKVVEVQKIGEDVVIYNI----NEEEFKNV 74
Query: 106 LLDFLNMGISLGELWEGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARI 165
++ ++ GE+ + S D + + G R+LRQDP E LL F+ S+NN I I
Sbjct: 75 WSEYFDLYRDYGEIKKELSR-DPLLKKSVDFGEGIRILRQDPFEILLSFIISANNRIPMI 133
Query: 166 TKMVDFLASLGSHLGNVEGFEFHEFPSLERLSLVSEVELRNAGFGYRCFAIKT 218
K ++ ++ +G ++ FP++++L +E + G+R +K
Sbjct: 134 KKCINNISEKAGKKLEYKGKIYYAFPTVDKLHEFTEKDFEECTAGFRAKYLKD 186
>2jhn_A ALKA, 3-methyladenine DNA-glycosylase; DNA repair,
N1-methyladenine, N3-methylcytosine, hyperthermophiles,
hydrolase; HET: MBO MES; 1.8A {Archaeoglobus fulgidus}
PDB: 2jhj_A
Length = 295
Score = 53.6 bits (129), Expect = 6e-09
Identities = 16/94 (17%), Positives = 29/94 (30%), Gaps = 5/94 (5%)
Query: 123 FSASDCRFAELAKYLAGARV---LRQDPVECLLQFLCSSNNNIARITKMVD-FLASLGSH 178
F D + L G + E + + + + K+ + G
Sbjct: 91 FMDGDEKLRMLKNRFYGFGRAGLMSMSVFEGIAKAIIQQQISFVVAEKLAAKIVGRFGDE 150
Query: 179 LGNVEGFEFHEFPSLERLSLVSEVELRNAGFGYR 212
+ G +F+ FP+ E + LR G R
Sbjct: 151 V-EWNGLKFYGFPTQEAILKAGVEGLRECGLSRR 183
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 39.1 bits (90), Expect = 8e-04
Identities = 25/151 (16%), Positives = 46/151 (30%), Gaps = 41/151 (27%)
Query: 69 QYTGPIG--PHLISLKHLQNGDVCY---HI--HTSPSEPAAKSALLD--FLNMG------ 113
Y P + +L Y HI H E + L FL+
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQ----YFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI 507
Query: 114 ISLGELWEGFSASDCRFAELAKYLAGARVLRQDPVECLLQFLCSSNNNIARITK-MVDFL 172
W + +L Y ++C ++ R+ ++DFL
Sbjct: 508 RHDSTAWNASGSILNTLQQLKFYK---------------PYICDNDPKYERLVNAILDFL 552
Query: 173 ASLGSHLGNVEGFEFHEFPSLERLSLVSEVE 203
+ +L ++ L R++L++E E
Sbjct: 553 PKIEENLIC------SKYTDLLRIALMAEDE 577
Score = 30.2 bits (67), Expect = 0.59
Identities = 20/104 (19%), Positives = 31/104 (29%), Gaps = 30/104 (28%)
Query: 137 LAGARVLRQDPVECLLQF--------LCSSNNNIARI-----TKMVDFLASLGSHLGNVE 183
+A V V+C + F C+S + + ++ S H N++
Sbjct: 166 VA-LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224
Query: 184 GFEFHEF-PSLERL--------SL-----VSEVELRNAGFGYRC 213
H L RL L V + NA F C
Sbjct: 225 -LRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA-FNLSC 266
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.3 bits (86), Expect = 0.003
Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 86/258 (33%)
Query: 2 QSLKN---SPSP------LKRPRLTPQPPPT----PPNPQ---TLTTNKPSKW----TPL 41
SL+N PSP L + ++ T P Q +L N P
Sbjct: 326 DSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLV-NGAKNLVVSGPPQ 384
Query: 42 NLTQSELSL-PLTFPTG--QT---FRWKK-TGPLQYTGPIG-PHLISLKHLQNGDVCYHI 93
+L L+L P+G Q+ F +K ++ P+ P +H
Sbjct: 385 SLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRF-LPVASP--------------FH- 428
Query: 94 HTSPS-EPAAKSALLDFLNMGISL--GEL----WEGFSASDCRFAELAKYLAG--ARVLR 144
S PA+ D + +S ++ ++ F SD R L+ ++ +
Sbjct: 429 --SHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLR--VLSGSISERIVDCII 484
Query: 145 QDPV--ECLLQFLCSSNNNIARITKMVDF-------LASLGSHLGNVEGFEFHEFPSLER 195
+ PV E QF + T ++DF L L N +G + R
Sbjct: 485 RLPVKWETTTQF---------KATHILDFGPGGASGLGVLTHR--NKDG-------TGVR 526
Query: 196 LSLVSEVEL-RNAGFGYR 212
+ + +++ + +G++
Sbjct: 527 VIVAGTLDINPDDDYGFK 544
Score = 33.5 bits (76), Expect = 0.059
Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 39/128 (30%)
Query: 40 PLNLTQSELSLPLTFPTGQTFRWKKTGPLQYTGPIGPHLISLKHLQNGDVCYHIHTSPSE 99
PL L+ L L PT F L+ + I P+E
Sbjct: 8 PLTLSHGSLEHVLLVPTASFF----------------IASQLQ-----EQFNKILPEPTE 46
Query: 100 PAAKSALLDFLNMGISLGELWE---GFSASDCRFAELAKYLAGARVLRQDPVECLLQFLC 156
A + + EL G+ +S +++ ++ +VL CL +F
Sbjct: 47 GFAAD------DEPTTPAELVGKFLGYVSSLVEPSKVGQF---DQVLN----LCLTEFEN 93
Query: 157 S--SNNNI 162
N+I
Sbjct: 94 CYLEGNDI 101
Score = 30.4 bits (68), Expect = 0.59
Identities = 22/122 (18%), Positives = 39/122 (31%), Gaps = 40/122 (32%)
Query: 47 ELSLPLTFPTGQTFRWKKTGPLQYTGPIGPHLISLKHLQ--NGDVCYHIHTSPSE----- 99
L++ G+ R + + + + L + K + N + S
Sbjct: 1671 NLTIHFGGEKGKRIR-ENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSAT 1729
Query: 100 ----PA----AKSALLDFLNMGI----------SLGELWEGFSASDCRFAELAKYLAGAR 141
PA K+A D + G+ SLGE ++A LA + A
Sbjct: 1730 QFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGE----YAA-------LA---SLAD 1775
Query: 142 VL 143
V+
Sbjct: 1776 VM 1777
Score = 28.5 bits (63), Expect = 2.4
Identities = 41/251 (16%), Positives = 75/251 (29%), Gaps = 81/251 (32%)
Query: 15 RLTPQPPPTPPNPQTL---------TTNKP-SKWTPLNLTQS----ELSLPLTFPTGQTF 60
+L + T + L +P K + L ++ L F GQ
Sbjct: 107 KLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFG-GQ-- 163
Query: 61 RWKKTGP-------LQ-----YTGPIGPHLISL--KHLQNGDVCYHIHTSPSEPAAKSAL 106
G L+ Y +G LI + L + A+
Sbjct: 164 -----GNTDDYFEELRDLYQTYHVLVGD-LIKFSAETLSE--------LIRTTLDAEK-- 207
Query: 107 LDFLNMGISLGELW---------EGFSASDCRFA-------ELAKYLAGARVLRQDPVEC 150
G+++ E W + + S + +LA Y+ A++L P E
Sbjct: 208 --VFTQGLNILE-WLENPSNTPDKDYLLS-IPISCPLIGVIQLAHYVVTAKLLGFTPGE- 262
Query: 151 LLQFLCSSNNNI-----ARITKMVD----FLASLGSHLGNV--EGFEFHE-FPSLE-RLS 197
L +L + + A D F S+ + + G +E +P+ S
Sbjct: 263 LRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPS 322
Query: 198 LVSEVELRNAG 208
++ + N G
Sbjct: 323 ILEDSLENNEG 333
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain,
immunoglobulin superfamily, transmembrane,
phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A
{Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Length = 389
Score = 29.0 bits (65), Expect = 1.1
Identities = 7/36 (19%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Query: 8 PSPLKRPRLTPQPPPTPPNPQTLTTNKPS---KWTP 40
S ++ + P P+PP+ ++ S T
Sbjct: 280 YSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITK 315
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY
acidic protein fold, fibronectin type III fold, hormone-
growth factor complex; NMR {Homo sapiens}
Length = 680
Score = 29.2 bits (64), Expect = 1.2
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 17 TPQPPPTPPNPQTLTTNKPSKWTP 40
TP+ PP+ + L P + P
Sbjct: 629 TPELPPSSAHRSHLKHRHPHHYKP 652
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 213
Score = 28.5 bits (62), Expect = 1.4
Identities = 10/53 (18%), Positives = 20/53 (37%)
Query: 7 SPSPLKRPRLTPQPPPTPPNPQTLTTNKPSKWTPLNLTQSELSLPLTFPTGQT 59
+ K P + PP PP P+ + + + L+L + ++ T
Sbjct: 25 GATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQ 77
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141,
structural genomics, PSI-2, protein structure
initiative; 2.10A {Listeria monocytogenes str}
Length = 283
Score = 28.4 bits (63), Expect = 1.8
Identities = 5/27 (18%), Positives = 8/27 (29%)
Query: 91 YHIHTSPSEPAAKSALLDFLNMGISLG 117
H HT + + + I L
Sbjct: 5 GHTHTEFCPHGTHDDVEEMVLKAIELD 31
>1mpg_A ALKA, 3-methyladenine DNA glycosylase II; DNA repair, base
excision, methylation, ALK hydrolase; 1.80A {Escherichia
coli} SCOP: a.96.1.3 d.129.1.2 PDB: 1diz_A 1pvs_A*
3cvs_A* 3cvt_A* 3cw7_A* 3cwa_A* 3cws_A* 3cwt_A* 3cwu_A*
3d4v_A* 3ogd_A* 3oh9_A* 3oh6_A*
Length = 282
Score = 28.2 bits (63), Expect = 1.9
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 4/87 (4%)
Query: 125 ASDCRFAELAKYLAGARV-LRQDPVECLLQFLCSSNNNIARITKMVD-FLASLGSHLGNV 182
+ L G R+ D E ++ + ++A K+ G L
Sbjct: 90 IVNGALGRLGAARPGLRLPGCVDAFEQGVRAILGQLVSVAMAAKLTARVAQLYGERLD-- 147
Query: 183 EGFEFHEFPSLERLSLVSEVELRNAGF 209
+ E+ FP+ +RL+ L+ G
Sbjct: 148 DFPEYICFPTPQRLAAADPQALKALGM 174
>1xx7_A Oxetanocin-like protein; PSI, secsg, protein structure initiative,
southeast collaboratory for structural genomics; 2.26A
{Pyrococcus furiosus} SCOP: a.211.1.1
Length = 184
Score = 27.8 bits (61), Expect = 2.3
Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 12/68 (17%)
Query: 87 GDV-CYHIHTSPSEPAAKSALLDFLNMGISLGELWEGFSASDCRFAELAKYLAGARVLRQ 145
D+ E A AL D L EL+E +S + +L K
Sbjct: 83 TDLPLSAQKYLNKEEAEAKALKDVLPE---YTELFEEYSKALTLEGQLVKIA-------- 131
Query: 146 DPVECLLQ 153
D ++ ++Q
Sbjct: 132 DKLDMIIQ 139
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent
protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta
specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Length = 380
Score = 27.9 bits (62), Expect = 2.7
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 10/42 (23%)
Query: 151 LLQFLCSSNNNIARITKMVD-----FLASLGSHLGNVEGFEF 187
L+++LC + +T +V + S+ N +G+E
Sbjct: 84 LIEYLCKNFGTDPEVTDLVQSTRIHIMPSM-----NPDGYEK 120
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase,
glycoprotein, receptor protei tyrosine phosphatase, cell
adhesion; HET: NAG; 3.10A {Homo sapiens}
Length = 731
Score = 27.8 bits (61), Expect = 2.9
Identities = 7/34 (20%), Positives = 9/34 (26%)
Query: 7 SPSPLKRPRLTPQPPPTPPNPQTLTTNKPSKWTP 40
+ P P QT T K +K
Sbjct: 695 DCVQVATKGAATPKPVPEPEKQTDHTVKGTKHHH 728
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2
related L recognition, receptor, innate immunity,
glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus
musculus} PDB: 3b2d_A* 3rg1_A*
Length = 606
Score = 27.3 bits (61), Expect = 4.5
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 152 LQFLCSSNNNIARITKMVDFLASL------GSHLGNVEGFEFHEFPSLERLSL 198
LQ L + +++ + + L++L + N+ FPSL LS+
Sbjct: 280 LQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSI 332
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta
barrel, alpha helix, beta flaps, structural protein;
2.49A {Acetivibrio cellulolyticus}
Length = 227
Score = 27.1 bits (59), Expect = 4.6
Identities = 6/30 (20%), Positives = 7/30 (23%)
Query: 8 PSPLKRPRLTPQPPPTPPNPQTLTTNKPSK 37
S + LTP P T
Sbjct: 190 ASTMPTVTLTPTPTATTTTTIPTAVPTTES 219
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold,
C-terminal, A transthyretin-like domain, hydrolase; HET:
NAG GEM; 2.70A {Drosophila melanogaster}
Length = 435
Score = 27.2 bits (60), Expect = 4.7
Identities = 6/42 (14%), Positives = 20/42 (47%), Gaps = 10/42 (23%)
Query: 151 LLQFLCSSNNNIARITKMVD-----FLASLGSHLGNVEGFEF 187
+ Q+L ++ I+ + ++V+ + ++ N +G+
Sbjct: 114 MAQYLLGNHERISDLGQLVNSTDIYLVPTM-----NPDGYAL 150
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 26.8 bits (58), Expect = 4.7
Identities = 7/32 (21%), Positives = 10/32 (31%), Gaps = 8/32 (25%)
Query: 2 QSLKNSPSPLKRPRLTPQPPPTPPNPQTLTTN 33
Q+LK + LK + P L
Sbjct: 20 QALKKLQASLK-----LYADDSAP---ALAIK 43
>3cb4_D GTP-binding protein LEPA; GTPase, OB-fold, membrane,
nucleotide-binding, translation; 2.80A {Escherichia
coli} PDB: 3deg_C*
Length = 599
Score = 27.0 bits (61), Expect = 5.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 7/39 (17%)
Query: 182 VEGFEFHEF-PSLERL-----SLVSEVELRNA-GFGYRC 213
V ++ F +L +L SL E E +A GFG+RC
Sbjct: 302 VSSDDYEAFRDALGKLSLNDASLFYEPESSSALGFGFRC 340
>2ywe_A GTP-binding protein LEPA; G domain, beta-barrel, ferredoxin-like
domain, structural GE NPPSFA; 2.05A {Aquifex aeolicus}
PDB: 2ywf_A* 2ywg_A* 2ywh_A*
Length = 600
Score = 27.0 bits (61), Expect = 6.1
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 7/39 (17%)
Query: 182 VEGFEFHEF-PSLERL-----SLVSEVELRNA-GFGYRC 213
E + E +LE+ ++V E E A G G+R
Sbjct: 304 AEDTTYEELRDALEKYAINDAAIVYEPESSPALGMGFRV 342
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin
enzyme, photoreactivating enzyme; HET: FAD; 1.80A
{Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB:
1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Length = 484
Score = 26.8 bits (60), Expect = 6.3
Identities = 11/49 (22%), Positives = 18/49 (36%)
Query: 15 RLTPQPPPTPPNPQTLTTNKPSKWTPLNLTQSELSLPLTFPTGQTFRWK 63
+ P P TP L+ + + PL L++ L F F +
Sbjct: 159 QPKPTPVATPTELVDLSPEQLTAIAPLLLSELPTLKQLGFDWDGGFPVE 207
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 93
Score = 25.5 bits (56), Expect = 6.4
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 8 PSPLKRPRLTPQPPPTPPNPQTLTTNKPS 36
PS ++P+ PP T+ PS
Sbjct: 63 PSSENEKAVSPKKALLPPTVSLSATSGPS 91
>2b0r_A Possible adenyl cyclase-associated protein; structural genomics
consortium, SGC, unknown function; 2.60A
{Cryptosporidium parvum}
Length = 202
Score = 25.8 bits (56), Expect = 9.9
Identities = 4/39 (10%), Positives = 11/39 (28%), Gaps = 2/39 (5%)
Query: 1 MQSLKNS--PSPLKRPRLTPQPPPTPPNPQTLTTNKPSK 37
+S + ++ + + + TN K
Sbjct: 6 HHHHHSSGLVPRGSKSQIYLKKEKKMKAARQVVTNGSPK 44
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.135 0.419
Gapped
Lambda K H
0.267 0.0666 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,265,927
Number of extensions: 180746
Number of successful extensions: 619
Number of sequences better than 10.0: 1
Number of HSP's gapped: 603
Number of HSP's successfully gapped: 60
Length of query: 218
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 128
Effective length of database: 4,188,903
Effective search space: 536179584
Effective search space used: 536179584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.1 bits)