BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027835
(218 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 48 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--EDDKILQ 105
P EILP FLYLGS +A+R +L GI+ +LN C N ++ + Y C+ ED+
Sbjct: 4 PVEILP-FLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKAD 62
Query: 106 ----FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
F +AI++++ + + VLVH G +RSA I +AYLM K RL ++ ++VK+RR
Sbjct: 63 ISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRR 122
Query: 162 PSVNLTEDVHQQLQEYEQKIFG 183
++ QL ++E ++
Sbjct: 123 SIISPNFSFMGQLLQFESQVLA 144
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 7/141 (4%)
Query: 48 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL--EDDKILQ 105
P EILP +L+LGS ++S L+ GI+ VLN SC N ++ F Y + ED+++++
Sbjct: 4 PVEILP-YLFLGSCSHSSDLQGLQACGITAVLNVSASCPNHFEGLFRYKSIPVEDNQMVE 62
Query: 106 ----FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
F +AI F++ + VLVH G +RSA I +AYLM+ + RL ++ +VK+RR
Sbjct: 63 ISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRR 122
Query: 162 PSVNLTEDVHQQLQEYEQKIF 182
++ QL ++E ++
Sbjct: 123 GVISPNFSFMGQLLQFETQVL 143
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 48 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLE------DD 101
P++I + ++LGS NAS L+ +G+ +LN N + F YH + D
Sbjct: 4 PTQIF-EHVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPGVFEYHNIRVYDEEATD 62
Query: 102 KILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
+ ++D +F+ + ++ + LVH G +RSA+ VIAY MK GW L +++ +VKERR
Sbjct: 63 LLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERR 122
Query: 162 PSVNLTEDVHQQLQEYE 178
+QL+EY+
Sbjct: 123 TVTKPNPSFMRQLEEYQ 139
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 82/154 (53%), Gaps = 15/154 (9%)
Query: 48 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLN----TVPSCQNLYKNSFTYHCLED--- 100
P EILP FLYLGS +AS+ L I+ +LN T +C + + + +ED
Sbjct: 6 PVEILP-FLYLGSAYHASKCEFLANLHITALLNVSRRTSEAC--MTHLHYKWIPVEDSHT 62
Query: 101 -DKILQFDDAIQFLEQCERDKAC-VLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVK 158
D F +AI F++ C R+K VLVH G +RS I +AYLMK K +RL ++ ++K
Sbjct: 63 ADISSHFQEAIDFID-CVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIK 121
Query: 159 ERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTP 192
+RR V+ QL +YE +I S NP P
Sbjct: 122 QRRSMVSPNFGFMGQLLQYESEILPSTP--NPQP 153
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 56 LYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDKI------LQFDDA 109
L+LG AS LL+ +GI+ ++N N F Y + + L FD
Sbjct: 33 LFLGRGSVASNRHLLQARGITCIVNATIEIPNFNWPQFEYVKVPLADMPHAPIGLYFDTV 92
Query: 110 IQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTED 169
+ R LVHC G +RSA + IAYLMK L +++ WVK RRP +
Sbjct: 93 ADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVG 152
Query: 170 VHQQLQEYEQKIFG 183
+QL +YE+++FG
Sbjct: 153 FWRQLIDYERQLFG 166
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 79/145 (54%), Gaps = 9/145 (6%)
Query: 45 SAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNS--FTYHCLE--- 99
++FP EILP FLYLG +++ +L+ GI +LN P+ NL++N+ F Y +
Sbjct: 1 ASFPVEILP-FLYLGCAKDSTNLDVLEEFGIKYILNVTPNLPNLFENAGEFKYKQIPISD 59
Query: 100 --DDKILQF-DDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQW 156
+ QF +AI F+++ VLVH + G +RS + +AYLM+ + ++
Sbjct: 60 HWSQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDI 119
Query: 157 VKERRPSVNLTEDVHQQLQEYEQKI 181
VK ++ +++ + QL ++E+ +
Sbjct: 120 VKMKKSNISPNFNFMGQLLDFERTL 144
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 51 ILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL------EDDKIL 104
++ +L LGS D A LK ++ +LN +N + + FTY + E + +
Sbjct: 6 VIKPWLLLGSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTYKSISILDLPETNILS 65
Query: 105 QFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSV 164
F + +F+E+ +R VLVH G +R+AAIVI +LM + + VK RPS+
Sbjct: 66 YFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSI 125
Query: 165 NLTEDVHQQLQEYEQ 179
+QL+ Y++
Sbjct: 126 CPNSGFMEQLRTYQE 140
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 46 AFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLE---DDK 102
+FP +ILP+ LYLGS +++ L GI +LN P+ N ++ + +H + D
Sbjct: 1 SFPVQILPN-LYLGSARDSANLESLAKLGIRYILNVTPNLPNFFEKNGDFHYKQIPISDH 59
Query: 103 ILQ-----FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWV 157
Q F +AI+F+++ VLVHC+ G +RS + +AYLM+ L ++ V
Sbjct: 60 WSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLV 119
Query: 158 KERRPSVNLTEDVHQQLQEYEQKI 181
K ++ +++ + QL ++E+ +
Sbjct: 120 KRKKSNISPNFNFMGQLLDFERSL 143
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 44 VSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLE---D 100
+++FP +ILP+ LYLGS +++ L GI +LN P+ N ++ + +H +
Sbjct: 2 LASFPVQILPN-LYLGSARDSANLESLAKLGIRYILNVTPNLPNFFEKNGDFHYKQIPIS 60
Query: 101 DKILQ-----FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQ 155
D Q F +AI+F+++ VLVH + G +RS + +AYLM+ L ++
Sbjct: 61 DHWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYD 120
Query: 156 WVKERRPSVNLTEDVHQQLQEYEQKI 181
VK ++ +++ + QL ++E+ +
Sbjct: 121 LVKRKKSNISPNFNFMGQLLDFERSL 146
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 22/146 (15%)
Query: 50 EILPDFLYLGSYDNASRSGL--LKTQGISRVL--------NTV-PSCQNLYKNSFTYHCL 98
EILP L+LG Y +A +S L L+ GI+ ++ N + P+ Q L++ Y L
Sbjct: 8 EILPG-LFLGPYSSAMKSKLPVLQKHGITHIICIRQNIEANFIKPNFQQLFR----YLVL 62
Query: 99 E------DDKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQ 152
+ ++ I F +F++ + VLVH G +RSAA VIAY+M+ G +
Sbjct: 63 DIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRD 122
Query: 153 SHQWVKERRPSVNLTEDVHQQLQEYE 178
+ +V+ERR +N QLQEYE
Sbjct: 123 AFAYVQERRFCINPNAGFVHQLQEYE 148
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 56 LYLGSYDNASRSGLLKTQGISRVLNT--------VPSCQNLYKNSFTYHCLEDDKILQFD 107
L++G+ A + LL GI+ +N P L F +D + +
Sbjct: 19 LFIGNARAAGATELLVRAGITLCVNVSRQQPGPRAPGVAELRVPVFDDPA--EDLLTHLE 76
Query: 108 DAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLT 167
+E RD LV+C G++RSAA+ AYLM+ +G L ++ Q VK RP
Sbjct: 77 PTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPN 136
Query: 168 EDVHQQLQEYEQKI 181
QLQ+YEQ +
Sbjct: 137 LGFWAQLQKYEQTL 150
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 56 LYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLE-----DDKILQFDDAI 110
LY+ + A+ +L + I+ V+N N Y + + ++ F D I
Sbjct: 27 LYISNGVAANNKLMLSSNQITMVINVSVEVVNTLYEDIQYMQVPVADSPNSRLCDFFDPI 86
Query: 111 -QFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTED 169
+ E + L+HC G +RSAA+ +AYLMK L +H W K RP +
Sbjct: 87 ADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSG 146
Query: 170 VHQQLQEYEQKIFG 183
+QL YE ++FG
Sbjct: 147 FWEQLIHYEFQLFG 160
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 49 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL------EDDK 102
++ILP LY+G++ +A + L ++ +L+ S + + + Y C+ +
Sbjct: 8 NKILPG-LYIGNFKDARDAEQLSKNKVTHILSVHDSARPMLE-GVKYLCIPAADSPSQNL 65
Query: 103 ILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRP 162
F ++I+F+ +C LVHC+ G +RS +VIAY+M + + V+ R
Sbjct: 66 TRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRS 125
Query: 163 SVNLTEDVHQQLQEYEQ 179
N +QLQE+E+
Sbjct: 126 CANPNVGFQRQLQEFEK 142
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 49 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNT------VPSCQNLYKN-SFTYHCLEDD 101
+E+ P LY+G A L+ G + VLN V + + Y++ YH +E D
Sbjct: 55 NEVWPK-LYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEAD 113
Query: 102 KILQFDDAIQFL-------EQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSH 154
+ FD ++ F D + +LVHC+ G++RSA +V+AYLM K L +
Sbjct: 114 DLPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAI 173
Query: 155 QWVKERR 161
Q V + R
Sbjct: 174 QQVAKNR 180
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 49 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLY---KNSFTYHCL-----ED 100
+ ILP FL+LG+ +A ++ I V+N V + LY K F Y L
Sbjct: 9 TPILP-FLFLGNEQDAQDLDTMQRLNIGYVIN-VTTHLPLYHYEKGLFNYKRLPATDSNK 66
Query: 101 DKILQFDDAIQFL----EQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQW 156
+ Q+ + QC + +L+HC G +RSA IVIAYLMK + ++++
Sbjct: 67 QNLRQYFEEAFEFIEEAHQCGKG---LLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKF 123
Query: 157 VKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTP 192
VK +RP ++ + QL E+E+ + V TP
Sbjct: 124 VKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTP 159
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 50 EILPDFLYLGSYDNASRSGLLKTQGISRVLNT------VPSCQNLYKN-SFTYHCLEDDK 102
E+ P +Y +S L++ GI+ V+N V + Y+ S Y+ +E D
Sbjct: 48 EVWPSLFLGDAYAARDKSKLIQL-GITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADD 106
Query: 103 ILQFDDAIQFLEQCERDKAC-------VLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQ 155
FD ++ FL +A VLVHC G +RSA +V+A+LM C+ L ++ Q
Sbjct: 107 NPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQ 166
Query: 156 WVKERR 161
V+ R
Sbjct: 167 TVQAHR 172
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 49 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLY---KNSFTYHCL-----ED 100
+ ILP FL+LG+ +A ++ I V+N V + LY K F Y L
Sbjct: 5 TPILP-FLFLGNEQDAQDLDTMQRLNIGYVIN-VTTHLPLYHYEKGLFNYKRLPATDSNK 62
Query: 101 DKILQFDDAIQFL----EQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQW 156
+ Q+ + QC + +L+HC G +RSA IVIAYLMK + ++++
Sbjct: 63 QNLRQYFEEAFEFIEEAHQCGKG---LLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKF 119
Query: 157 VKERRPSVNLTEDVHQQLQEYEQKIFGSV 185
VK +RP ++ + QL E+E+ + V
Sbjct: 120 VKGKRPIISPNLNFMGQLLEFEEDLNNGV 148
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 49 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCL------EDDK 102
+++LP LYLG++ +A L I+ +++ S Q L ++ TY + E
Sbjct: 9 TKVLPG-LYLGNFIDAKDLDQLGRNKITHIISIHESPQPLLQD-ITYLRIPVADTPEVPI 66
Query: 103 ILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRP 162
F + I F+ C + LVH G +RS IV AY+M G + +K RP
Sbjct: 67 KKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRP 126
Query: 163 SVNLTEDVHQQLQEY 177
N QQL+E+
Sbjct: 127 IANPNPGFRQQLEEF 141
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 50 EILPDFLYLGSYDNASRSGLLKTQGISRVLNT------VPSCQNLYKN-SFTYHCLEDDK 102
E+ P +Y +S L++ GI+ V+N V + Y+ S Y+ +E D
Sbjct: 48 EVWPSLFLGDAYAARDKSKLIQL-GITHVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADD 106
Query: 103 ILQFDDAIQFLEQCERDKAC-------VLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQ 155
FD ++ FL +A VLVHC G +RSA +V+A+LM + L ++ Q
Sbjct: 107 NPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQ 166
Query: 156 WVKERR 161
V+ R
Sbjct: 167 TVQAHR 172
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 106 FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYL 142
FDD FL +C++ VLVHC+ G NRS A ++AYL
Sbjct: 90 FDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYL 126
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 106 FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYL 142
FDD FL +C++ VLVHC G NRS A ++AYL
Sbjct: 111 FDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYL 147
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 106 FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLM 143
FDD FL +C++ VLVH G NRS A+++AYLM
Sbjct: 94 FDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLM 131
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 48 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKN----------SFTYHC 97
P++I+ +++LGS+ NA + IS +L +L+K+ S H
Sbjct: 10 PTQII-QYIHLGSFLNAHNVDYIHNNNISSILLVGIEVPSLFKDQCDILRLDIVSEEGHQ 68
Query: 98 LEDDKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWV 157
L D +AI+F+ + + K VL+ G N++ AIVIA+LM + + V
Sbjct: 69 LYDS----IPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKV 124
Query: 158 KERRPSVNLTEDVHQQLQEYEQKI 181
+ P +++ QL+ +E+K+
Sbjct: 125 QGLYPLIDIESGFILQLKLFEKKL 148
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 56 LYLGSYDNASRSGLLKTQGISRVLNTVPS----CQNLYKN-SFTYHCLEDDKILQFDDAI 110
LYLG D A+ L+ GI+ VLN S Y+ Y +E FD +I
Sbjct: 9 LYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSI 68
Query: 111 QFLEQCE-------RDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
F + + +LVHC G +RSA +V+AYLM L ++ + VK+ R
Sbjct: 69 HFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHR 126
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 17/129 (13%)
Query: 49 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNT--------VPSCQNLYKNS-FTYHCLE 99
+E+ P +Y+G+ A L+ GI+ VLN V + N YK+S TY ++
Sbjct: 30 NEVTPR-IYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 88
Query: 100 DDKILQFD------DAIQFLEQCERDK-ACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQ 152
+ +F+ A F++Q K VLVHC G +RS +VIAYLM + +
Sbjct: 89 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 148
Query: 153 SHQWVKERR 161
+ V++ R
Sbjct: 149 ALSIVRQNR 157
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 17/129 (13%)
Query: 49 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNT--------VPSCQNLYKNS-FTYHCLE 99
+E+ P +Y+G+ A L+ GI+ VLN V + N YK+S TY ++
Sbjct: 29 NEVTPR-IYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 87
Query: 100 DDKILQFD------DAIQFLEQCERDK-ACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQ 152
+ +F+ A F++Q K VLVHC G +RS +VIAYLM + +
Sbjct: 88 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 147
Query: 153 SHQWVKERR 161
+ V++ R
Sbjct: 148 ALSIVRQNR 156
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 48 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKN--SFTYHCLE---DDK 102
P +LP+ +YL Y + LL V+N +L + YH D +
Sbjct: 44 PLLVLPEKIYL--YSEPTVKELL---PFDVVINVAEEANDLRMQVPAVEYHHYRWEHDSQ 98
Query: 103 I-LQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
I L + + +L+HC G +RSA ++IAY+MK L S+ +K R
Sbjct: 99 IALDLPSLTSIIHAATTKREKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRA 158
Query: 162 PSVNLTEDVHQQLQEYE 178
+N + + QL E+E
Sbjct: 159 DKINPSIGLIFQLMEWE 175
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 79 LNTVPSCQNLYKNSFTYHCLEDDKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIV 138
+ VP+ NL+K +QF Q L QC V VHC G++RSA +V
Sbjct: 66 MTGVPTLANLHKG------------VQFALKYQALGQC------VYVHCKAGRSRSATMV 107
Query: 139 IAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKI 181
AYL++ W ++ + + + R +++ + L+E+ ++I
Sbjct: 108 AAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEI 150
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 56 LYLGSYDNASRSGLLKTQGISRVLNTVPS----CQNLYKN-SFTYHCLED------DKIL 104
LYLG D A+ L+ GI+ VLN S Y+ Y +E D +
Sbjct: 10 LYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSI 69
Query: 105 QFDDAIQFLEQC-ERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
F A F+ + + +LVH G +RSA +V+AYLM L ++ + VK+ R
Sbjct: 70 HFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHR 127
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 49 SEILPDFLYLGSYDNASRSGLLKTQGISRVLNT--------VPSCQNLYKNS-FTYHCLE 99
+E+ P +Y+G+ A L+ GI+ VLN V + N YK+S TY ++
Sbjct: 30 NEVTPR-IYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 88
Query: 100 DDKILQFD------DAIQFLEQCERDK-ACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQ 152
+ +F+ A F++Q K VLVH G +RS +VIAYLM + +
Sbjct: 89 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKS 148
Query: 153 SHQWVKERR 161
+ V++ R
Sbjct: 149 ALSIVRQNR 157
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 108 DAI--QFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRP 162
DAI +FL+ CE + + VHC G R+ ++ Y+MK A++ WV+ RP
Sbjct: 255 DAIVKEFLDICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRP 311
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 48 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKN--SFTYHCLE---DDK 102
P +LP+ +YL Y + LL V+N +L + YH D +
Sbjct: 44 PLLVLPEKIYL--YSEPTVKELL---PFDVVINVAEEANDLRMQVPAVEYHHYRWEHDSQ 98
Query: 103 I-LQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
I L + + +L+H G +RSA ++IAY+MK L S+ +K R
Sbjct: 99 IALDLPSLTSIIHAATTKREKILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRA 158
Query: 162 PSVNLTEDVHQQLQEYE 178
+N + + QL E+E
Sbjct: 159 DKINPSIGLIFQLMEWE 175
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 48 PSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKN--SFTYHCLE---DDK 102
P +LP+ +YL Y + LL V+N +L + YH D +
Sbjct: 44 PLLVLPEKIYL--YSEPTVKELL---PFDVVINVAEEANDLRMQVPAVEYHHYRWEHDSQ 98
Query: 103 I-LQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
I L + + +L+H G +RSA ++IAY+MK L S+ +K R
Sbjct: 99 IALDLPSLTSIIHAATTKREKILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRA 158
Query: 162 PSVNLTEDVHQQLQEYE 178
+N + + QL E+E
Sbjct: 159 DKINPSIGLIFQLMEWE 175
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 79 LNTVPSCQNLYKNSFTYHCLEDDKILQFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIV 138
+ VP+ NL+K +QF Q L QC V VH G++RSA +V
Sbjct: 67 MTGVPTLANLHKG------------VQFALKYQALGQC------VYVHSKAGRSRSATMV 108
Query: 139 IAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKI 181
AYL++ W ++ + + + R +++ + L+E+ ++I
Sbjct: 109 AAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEI 151
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 108 DAI--QFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRP 162
DAI +FL+ CE + + VH G R+ ++ Y+MK A++ WV+ RP
Sbjct: 255 DAIVKEFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRP 311
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 105 QFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSV 164
Q D +Q +++ V VHC G R+ ++ YL+K +G + ++ RP
Sbjct: 73 QIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRLRPGS 132
Query: 165 NLTEDVHQQLQEYEQK 180
T + + + ++ Q+
Sbjct: 133 IETYEQEKAVFQFYQR 148
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 105 QFDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSV 164
Q D +Q +++ V VHC G R+ + YL+K +G + ++ RP
Sbjct: 74 QIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAEIRRLRPGS 133
Query: 165 NLTEDVHQQLQEYEQK 180
T + + + ++ Q+
Sbjct: 134 IETYEQEKAVFQFYQR 149
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 119 DKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYE 178
+K LVHC+ G R+ I+ +YL+ +G + + V+ RP +Q YE
Sbjct: 88 EKEGNLVHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRPGA---------VQTYE 138
Query: 179 QKIF 182
Q++F
Sbjct: 139 QEMF 142
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 112 FLEQCER-----DKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNL 166
F+ CER + VHC G NR+ ++ A+L++ W + + + RP
Sbjct: 106 FIRLCERFNERSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIY 165
Query: 167 TEDVHQQLQEYEQKIFGSVDGSNPTPL 193
D ++L + +G ++ + P P+
Sbjct: 166 KGDYLKEL----FRRYGDIEEAPPPPV 188
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 116 CERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
+R+ VH G R+ A+ + Y +G++L ++H+ + +R
Sbjct: 102 VKRNGGVTYVHSTAGXGRAPAVALTYXFWVQGYKLXEAHKLLXSKR 147
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 116 CERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
CE +CV VHC+ G R+ +V L++ G + + Q+++++R
Sbjct: 96 CEAPGSCVAVHCVAGLGRAPVLVALALIES-GMKYEDAIQFIRQKR 140
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 116 CERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERR 161
CE +CV VHC+ G R+ +V L++ G + + Q+++++R
Sbjct: 93 CEAPGSCVAVHCVAGLGRAPVLVALALIE-SGMKYEDAIQFIRQKR 137
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 112 FLEQCER-----DKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNL 166
F+ CER + VHC G NR+ ++ A+L++ W + + + RP
Sbjct: 128 FIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIY 187
Query: 167 TEDVHQQL 174
D ++L
Sbjct: 188 KGDYLKEL 195
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 119 DKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYE 178
+K LVH + G R+ I+ +YL+ +G + + V+ RP +Q YE
Sbjct: 88 EKEGNLVHSVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRPGA---------VQTYE 138
Query: 179 QKIF 182
Q++F
Sbjct: 139 QEMF 142
>pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase
Domain Of Mouse Mrna Capping Enzyme
Length = 210
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 112 FLEQCER-----DKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNL 166
F+ CER + VH G NR+ ++ A+L++ W + + + RP
Sbjct: 106 FIRLCERFNERSPPELIGVHXTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIY 165
Query: 167 TEDVHQQLQEYEQKIFGSVDGSNPTPL 193
D ++L + +G ++ + P P+
Sbjct: 166 KGDYLKEL----FRRYGDIEEAPPPPV 188
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 98 LEDDKILQ--FDDAIQFLEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKG 147
L + I+Q D +F E+C V VHC G NR+ +V YLM G
Sbjct: 91 LPPESIVQEFIDTVKEFTEKCP--GMLVGVHCTHGINRTGYMVCRYLMHTLG 140
>pdb|1HR6|B Chain B, Yeast Mitochondrial Processing Peptidase
pdb|1HR6|D Chain D, Yeast Mitochondrial Processing Peptidase
pdb|1HR6|F Chain F, Yeast Mitochondrial Processing Peptidase
pdb|1HR6|H Chain H, Yeast Mitochondrial Processing Peptidase
Length = 443
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 171 HQQLQEYEQKIFGSVDGS-NPTPLPALSAGMPSFSFG 206
H++L +Y QK FG V S +P PL + +P F G
Sbjct: 199 HEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRG 235
>pdb|1HR7|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
pdb|1HR7|D Chain D, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
pdb|1HR7|F Chain F, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
pdb|1HR7|H Chain H, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
pdb|1HR8|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Cytochrome C Oxidase Iv Signal Peptide
pdb|1HR8|D Chain D, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Cytochrome C Oxidase Iv Signal Peptide
pdb|1HR8|F Chain F, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Cytochrome C Oxidase Iv Signal Peptide
pdb|1HR8|H Chain H, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Cytochrome C Oxidase Iv Signal Peptide
pdb|1HR9|B Chain B, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Malate Dehydrogenase Signal Peptide
pdb|1HR9|D Chain D, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Malate Dehydrogenase Signal Peptide
pdb|1HR9|F Chain F, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Malate Dehydrogenase Signal Peptide
pdb|1HR9|H Chain H, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Malate Dehydrogenase Signal Peptide
Length = 443
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 171 HQQLQEYEQKIFGSVDGS-NPTPLPALSAGMPSFSFG 206
H++L +Y QK FG V S +P PL + +P F G
Sbjct: 199 HEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRG 235
>pdb|1YUZ|A Chain A, Partially Reduced State Of Nigerythrin
pdb|1YUZ|B Chain B, Partially Reduced State Of Nigerythrin
Length = 202
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 10 CSVCGHYHKYEEGEVCGIC 28
C +CG+ HK E+ E C IC
Sbjct: 174 CPICGYIHKGEDFEKCPIC 192
>pdb|1YUX|A Chain A, Mixed Valant State Of Nigerythrin
pdb|1YUX|B Chain B, Mixed Valant State Of Nigerythrin
pdb|1YV1|A Chain A, Fully Reduced State Of Nigerythrin (All Ferrous)
pdb|1YV1|B Chain B, Fully Reduced State Of Nigerythrin (All Ferrous)
Length = 202
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 10 CSVCGHYHKYEEGEVCGIC 28
C +CG+ HK E+ E C IC
Sbjct: 174 CPICGYIHKGEDFEKCPIC 192
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 117 ERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQS 153
E D +HC GK R+ ++ AYL+ + AQ
Sbjct: 108 EDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQE 144
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,729,439
Number of Sequences: 62578
Number of extensions: 262095
Number of successful extensions: 673
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 609
Number of HSP's gapped (non-prelim): 59
length of query: 218
length of database: 14,973,337
effective HSP length: 95
effective length of query: 123
effective length of database: 9,028,427
effective search space: 1110496521
effective search space used: 1110496521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)