Query         027835
Match_columns 218
No_of_seqs    146 out of 1321
Neff          7.8 
Searched_HMMs 29240
Date          Tue Mar 26 18:19:08 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/027835.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2201-2205//hhsearch_pdb/027835hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3emu_A Leucine rich repeat and   1.0       1       1  219.2  16.1  143   46-189     8-156 (161)
  2 2g6z_A Dual specificity protei   1.0       1       1  216.7  18.3  167   44-211     2-187 (211)
  3 3ezz_A Dual specificity protei   1.0       1       1  212.6  18.2  138   45-183     1-144 (144)
  4 2nt2_A Protein phosphatase sli   1.0       1       1  205.6  18.7  139   45-184     1-145 (145)
  5 2esb_A Dual specificity protei   1.0       1       1  205.5  19.9  147   44-191    16-168 (188)
  6 3s4e_A Dual specificity protei   1.0       1       1  204.7  18.1  135   47-182     3-143 (144)
  7 2oud_A Dual specificity protei   1.0       1       1  203.6  20.2  152   41-193     1-160 (177)
  8 2j16_A SDP-1, tyrosine-protein   1.0       1       1  203.6  17.0  138   43-185    39-182 (182)
  9 2hxp_A Dual specificity protei   1.0       1       1  200.9  18.1  141   44-185     2-150 (155)
 10 2hcm_A Dual specificity protei   1.0       1       1  199.3  18.5  147   43-190     7-159 (164)

No 1  
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=1.00  E-value=1  Score=219.18  Aligned_cols=143  Identities=24%  Similarity=0.320  Sum_probs=132.0

Q ss_pred             CCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCC------CCHHHHHHHHHHHHHC
Q ss_conf             9995373893898392111899998839985899668898544579708995458983------0389999999999866
Q 027835           46 AFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDKI------LQFDDAIQFLEQCERD  119 (218)
Q Consensus        46 ~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~fI~~~~~~  119 (218)
                      ..+++|.| +||+|+...+.+.+.|++.||++|||++.+.+..+..++.|+.+|..|.      ..|+++++||++++..
T Consensus         8 ~~~~~I~~-~LylG~~~~a~~~~~L~~~gIt~Vlnl~~~~~~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fI~~~~~~   86 (161)
T 3emu_A            8 LSPTQIIQ-YIHLGSFLNAHNVDYIHNNNISSILLVGIEVPSLFKDQCDILRLDIVSEEGHQLYDSIPNAIKFIIRSIQR   86 (161)
T ss_dssp             GSCEEEET-TEEEEETTGGGCHHHHHHTTEEEEEEEC-------CTTSEEEEECCCCSSTTHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEC-CEEECCHHHHHCHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf             87158889-98998967850999999879989999589986436788879999671799986899999999999999966


Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             9949998299883789999999998449999999999997699865899899999999999807989999
Q 027835          120 KACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSN  189 (218)
Q Consensus       120 ~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~~~~~~~  189 (218)
                      +++|||||.+|+|||+++++||||++.+|++++|+++||.+||.+.||++|++||..||.+|.+++.-+.
T Consensus        87 ~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~~~~~~~~  156 (161)
T 3emu_A           87 KEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYPLIDIESGFILQLKLFEKKLEKMNSEGH  156 (161)
T ss_dssp             TCEEEEEESSSSSHHHHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHTCC--
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             9969998599975789999999999809999999999999799758898799999999999704899976


No 2  
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=1.00  E-value=1  Score=216.74  Aligned_cols=167  Identities=33%  Similarity=0.496  Sum_probs=141.8

Q ss_pred             CCCCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCC------CCHHHHHHHHHHHH
Q ss_conf             699995373893898392111899998839985899668898544579708995458983------03899999999998
Q 027835           44 VSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDKI------LQFDDAIQFLEQCE  117 (218)
Q Consensus        44 ~~~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~fI~~~~  117 (218)
                      +...|++|.| +||+|+...+.+.+.|+++||++|||+..+.+..+..++.|+++|..|.      ..|+++++||+..+
T Consensus         2 ~~~~p~eI~p-~LylG~~~~a~d~~~L~~~GIt~VInl~~e~~~~~~~gi~y~~ipi~D~~~~~l~~~~~~~~~fI~~~~   80 (211)
T 2g6z_A            2 SHMGPVEILP-FLYLGSAYHASKCEFLANLHITALLNVSRRTSEACMTHLHYKWIPVEDSHTADISSHFQEAIDFIDCVR   80 (211)
T ss_dssp             CSCCCEEEET-TEEEEEHHHHTCHHHHHHHTCCEEEECSSCCCCTTCTTSEEEECCCCSSTTSCCGGGHHHHHHHHHHHH
T ss_pred             CCCCCEEEEC-CEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             9998769899-999868712207999998799999986999852112687799965778888789999999999999998


Q ss_pred             HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC------
Q ss_conf             66994999829988378999999999844999999999999769986589989999999999980798999999------
Q 027835          118 RDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPT------  191 (218)
Q Consensus       118 ~~~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~~~~~~~~~------  191 (218)
                      ..+++|||||.+|++||+++++||||+..+|++++|+++|+.+||.+.||.+|++||..||.+|.+++..-.+.      
T Consensus        81 ~~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~s~~eAl~~vr~~Rp~i~pN~~f~~qL~~~e~~l~~~~~~p~~~~c~~e~  160 (211)
T 2g6z_A           81 EKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNFGFMGQLLQYESEILPSTPNPQPPSCQGEA  160 (211)
T ss_dssp             HTTCCEEEEESSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHSCC-------------
T ss_pred             HCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             56986999899999708999999999983999999999999979986789899999999999984368899999753011


Q ss_pred             ----CC---CCCCCCCCCCCCCCCCCC
Q ss_conf             ----98---878889898778863356
Q 027835          192 ----PL---PALSAGMPSFSFGFPKGV  211 (218)
Q Consensus       192 ----~~---~~~~~~~~~~~~~~~~~~  211 (218)
                          ..   ...+.+.+...|.||.|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (211)
T 2g6z_A          161 AGSSLIGHLQTLSPDMQGAYCTFPASV  187 (211)
T ss_dssp             ---------------------------
T ss_pred             CCCCCCCCCCCCCCCCCCCEECCCCCC
T ss_conf             354322223456765554243145212


No 3  
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=1.00  E-value=1  Score=212.62  Aligned_cols=138  Identities=35%  Similarity=0.603  Sum_probs=128.6

Q ss_pred             CCCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCC------CCCHHHHHHHHHHHHH
Q ss_conf             9999537389389839211189999883998589966889854457970899545898------3038999999999986
Q 027835           45 SAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDK------ILQFDDAIQFLEQCER  118 (218)
Q Consensus        45 ~~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~~~~~~~~i~~~~------~~~~~~~~~fI~~~~~  118 (218)
                      +.+|++|.| +||+|+...+.+.+.|++.||++|||+..+.+..+..++.|+.+|..|      .+.|+++++||+....
T Consensus         1 M~~p~~I~~-~lylg~~~~a~~~~~L~~~gI~~Vi~l~~~~~~~~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~~~   79 (144)
T 3ezz_A            1 MGGPVEILP-FLYLGSAYHAARRDMLDALGITALLNVSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKD   79 (144)
T ss_dssp             CCCCEEEET-TEEEEEHHHHTCHHHHHHTTCCEEEECSSSCCCTTTTTSEEEECCCCSSSSCCTTTTHHHHHHHHHHHHH
T ss_pred             CCCCCEEEC-CEEECCHHHCCCHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             999646358-8799882150899999987993999756899755778856999970438997759999999999999996


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             69949998299883789999999998449999999999997699865899899999999999807
Q 027835          119 DKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFG  183 (218)
Q Consensus       119 ~~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~  183 (218)
                      .+++|||||.+|+|||+++++||||+..+|++++|+++||.+||.+.||++|++||..||.+|..
T Consensus        80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~a  144 (144)
T 3ezz_A           80 CRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFMGQLLQFESQVLA  144 (144)
T ss_dssp             TTCCEEEEESSSSSHHHHHHHHHHHHHHTCCHHHHHHHHHTTCTTCCCCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             69929999999987629999999999839999999999999799528898699999999999739


No 4  
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=1.00  E-value=1  Score=205.62  Aligned_cols=139  Identities=31%  Similarity=0.534  Sum_probs=127.9

Q ss_pred             CCCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCC------CCCHHHHHHHHHHHHH
Q ss_conf             9999537389389839211189999883998589966889854457970899545898------3038999999999986
Q 027835           45 SAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDK------ILQFDDAIQFLEQCER  118 (218)
Q Consensus        45 ~~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~~~~~~~~i~~~~------~~~~~~~~~fI~~~~~  118 (218)
                      +..|++|.| +||+|+...+.+.+.|++.||++|||++.+.+..+..++.|+.+|..|      ...|+++++||+..+.
T Consensus         1 m~~~~~I~~-~lylg~~~~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~ipi~D~~~~~l~~~~~~~~~fi~~~~~   79 (145)
T 2nt2_A            1 MDSPTQIFE-HVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKK   79 (145)
T ss_dssp             --CCEEEET-TEEEECHHHHTCHHHHHHTTEEEEEECCSSSCCSCBTTBEEEECCCCSSTTCCCGGGHHHHHHHHHHHHH
T ss_pred             CCCCCEEEC-CEEECCHHHHCCHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             998618669-8899786684899999977998999828998667999737999887579978679999999999999997


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             699499982998837899999999984499999999999976998658998999999999998079
Q 027835          119 DKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGS  184 (218)
Q Consensus       119 ~~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~~  184 (218)
                      .+++|||||.+|+|||+++++||||+..+|++++|+++|+.+||.+.||++|+.||..||..|.++
T Consensus        80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~a~  145 (145)
T 2nt2_A           80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILLAR  145 (145)
T ss_dssp             TTCEEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHC-
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             699089989999962799999999987099999999999997997589988999999999986359


No 5  
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=1.00  E-value=1  Score=205.47  Aligned_cols=147  Identities=27%  Similarity=0.367  Sum_probs=133.1

Q ss_pred             CCCCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCC------CCHHHHHHHHHHHH
Q ss_conf             699995373893898392111899998839985899668898544579708995458983------03899999999998
Q 027835           44 VSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDKI------LQFDDAIQFLEQCE  117 (218)
Q Consensus        44 ~~~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~fI~~~~  117 (218)
                      ....+++|.| +||+|+...+.+.+.|++.||++|||+..+.+.....++.|+.+|..|.      ..|+.+++||+.++
T Consensus        16 ~~~~~~~I~~-~LylG~~~~a~d~~~L~~~gIt~Vi~l~~~~~~~~~~~i~~~~ipi~D~~~~~~~~~~~~~~~fI~~~~   94 (188)
T 2esb_A           16 SVSGLSQITK-SLYISNGVAANNKLMLSSNQITMVINVSVEVVNTLYEDIQYMQVPVADSPNSRLCDFFDPIADHIHSVE   94 (188)
T ss_dssp             --CCCEEEET-TEEEECTTGGGCHHHHHHTTCCEEEECCSSCCCCCCTTCEEEECCCCSCTTSCGGGGHHHHHHHHHHHH
T ss_pred             CCCCCEEEEC-CEEECCCHHHCCHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             8889569739-989858027359999997799599981688887677898799996848998667999999999999999


Q ss_pred             HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             66994999829988378999999999844999999999999769986589989999999999980798999999
Q 027835          118 RDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPT  191 (218)
Q Consensus       118 ~~~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~~~~~~~~~  191 (218)
                      ..+++|||||.+|+|||+++++||||+..+|++++|+++|+.+||.+.||++|++||..||..|.+++++....
T Consensus        95 ~~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~~~~~~~~~  168 (188)
T 2esb_A           95 MKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVS  168 (188)
T ss_dssp             HTTCCEEEECSSSSSHHHHHHHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHSSCSCCEEC
T ss_pred             HCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf             75997999889997658999999999974999999999999979965889879999999999970689766635


No 6  
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=1.00  E-value=1  Score=204.72  Aligned_cols=135  Identities=30%  Similarity=0.473  Sum_probs=125.7

Q ss_pred             CCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCC------CCHHHHHHHHHHHHHCC
Q ss_conf             995373893898392111899998839985899668898544579708995458983------03899999999998669
Q 027835           47 FPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDKI------LQFDDAIQFLEQCERDK  120 (218)
Q Consensus        47 ~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~fI~~~~~~~  120 (218)
                      ..++|.| +||+|+...+.+.+.|++.||++|||++.+.+..+..++.|+.+|..|.      +.|+++++||+..+..+
T Consensus         3 ~~~~I~~-~LylG~~~~a~~~~~L~~~gI~~Vl~l~~~~~~~~~~~~~~~~ipi~D~~~~~~~~~~~~~~~fi~~~~~~~   81 (144)
T 3s4e_A            3 QVGVIKP-WLLLGSQDAAHDLDTLKKNKVTHILNVAYGVENAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKD   81 (144)
T ss_dssp             CCEEEET-TEEEECHHHHTCHHHHHHTTCCEEEECSSSCCCCCTTTSEEEECCCCCCTTSCGGGGHHHHHHHHHHHHHTT
T ss_pred             CHHEECC-CEEECCHHHHCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             1408819-989999668179999998499999981689887777887799996527998726999999999999999739


Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             94999829988378999999999844999999999999769986589989999999999980
Q 027835          121 ACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIF  182 (218)
Q Consensus       121 g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~  182 (218)
                      ++|||||.+|+|||+++++||||+..+|++++|+++||.+||.+.||++|+.||..||++..
T Consensus        82 ~~VlVHC~~G~sRS~~~v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~~~  143 (144)
T 3s4e_A           82 GVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFMEQLRTYQEGKE  143 (144)
T ss_dssp             CCEEEECSSSSSHHHHHHHHHHHHHHCCCHHHHHHHHHHHSTTCCCCHHHHHHHHHTTHHHH
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             92999829997658999999999981999999999999979886899879999999997505


No 7  
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=1.00  E-value=1  Score=203.64  Aligned_cols=152  Identities=30%  Similarity=0.447  Sum_probs=134.8

Q ss_pred             CCCCCCCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCC--CCCCEEEECCCCCC------CCHHHHHHH
Q ss_conf             2236999953738938983921118999988399858996688985445--79708995458983------038999999
Q 027835           41 TLQVSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLY--KNSFTYHCLEDDKI------LQFDDAIQF  112 (218)
Q Consensus        41 ~~~~~~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~--~~~~~~~~i~~~~~------~~~~~~~~f  112 (218)
                      |..+...+++|.| +||+|+...+.+.+.|+++||++|||+..+.+...  ..++.|+.+|..|.      ..|..+++|
T Consensus         1 ~~~~~~~~~~I~p-~LylG~~~~a~d~~~L~~~gI~~Vi~l~~e~p~~~~~~~~i~~~~ipi~D~~~~~l~~~~~~~~~~   79 (177)
T 2oud_A            1 PDIENAELTPILP-FLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNKQNLRQYFEEAFEF   79 (177)
T ss_dssp             CTTCSCCCEEEET-TEEEECTTTTTCHHHHHHTTEEEEEECCSSSCCTTTTTTCSEEEECCCCCCSSCCCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEC-CEEECCHHHHCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf             9877898759889-989859536359999997799699993589986434679806999879889942389999999999


Q ss_pred             HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99998669949998299883789999999998449999999999997699865899899999999999807989999999
Q 027835          113 LEQCERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNPTP  192 (218)
Q Consensus       113 I~~~~~~~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~~~~~~~~~~  192 (218)
                      |+..+..+++|||||.+|+|||+++++||||+..+|++++|+++|+.+||.+.||++|+.||..||..|.++.++.....
T Consensus        80 i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~~~~~A~~~v~~~Rp~~~pn~~f~~qL~~~e~~l~~~~~~~~~~p  159 (177)
T 2oud_A           80 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEEDLNNGVTPRILTP  159 (177)
T ss_dssp             HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHTSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHTSSCCCCCT
T ss_pred             HHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             99998469919998299997059999999999809999999999998799868898899999999999816887765684


Q ss_pred             C
Q ss_conf             8
Q 027835          193 L  193 (218)
Q Consensus       193 ~  193 (218)
                      .
T Consensus       160 ~  160 (177)
T 2oud_A          160 K  160 (177)
T ss_dssp             T
T ss_pred             C
T ss_conf             0


No 8  
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=1.00  E-value=1  Score=203.60  Aligned_cols=138  Identities=23%  Similarity=0.334  Sum_probs=122.2

Q ss_pred             CCCCCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCC--CCCEEEECCCCC----CCCHHHHHHHHHHH
Q ss_conf             369999537389389839211189999883998589966889854457--970899545898----30389999999999
Q 027835           43 QVSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYK--NSFTYHCLEDDK----ILQFDDAIQFLEQC  116 (218)
Q Consensus        43 ~~~~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~--~~~~~~~i~~~~----~~~~~~~~~fI~~~  116 (218)
                      ....+|.+|++++||+|+...+.+     ..||++|||++.+.+....  .++.|+.+|+.+    ...|+.+++||+++
T Consensus        39 ~~~~~p~~ii~~~LylG~~~~a~d-----~~gIt~Vlnv~~e~~~~~~~~~~i~y~~ip~~d~~~i~~~~~~~~~fI~~~  113 (182)
T 2j16_A           39 IYPKGPLLVLPEKIYLYSEPTVKE-----LLPFDVVINVAEEANDLRMQVPAVEYHHYRWEHDSQIALDLPSLTSIIHAA  113 (182)
T ss_dssp             -CCSSSEEEETTTEEEEESCCTTT-----TTTCSEEEECCSCC--------CCEEEECCCSSGGGGGGGHHHHHHHHHHH
T ss_pred             CCCCCCEEEECCCEEEECHHHHHH-----HHCCCEEEEECCCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf             178888269899679957999998-----719999999558977721206883699875689856999999999999999


Q ss_pred             HHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             866994999829988378999999999844999999999999769986589989999999999980798
Q 027835          117 ERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSV  185 (218)
Q Consensus       117 ~~~~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~~~  185 (218)
                      +..+++|||||.+|+|||+++++||||++.+|++++|+++||.+||.+.||.+|++||..||.+|.+++
T Consensus       114 ~~~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~s~~~A~~~v~~~Rp~i~pn~~f~~qL~~~e~~L~~k~  182 (182)
T 2j16_A          114 TTKREKILIHAQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVALNAKT  182 (182)
T ss_dssp             HHTTCCEEEEESSCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHC--
T ss_pred             HHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             843781899879999868999999999982999999999999879987889889999999999985469


No 9  
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=1.00  E-value=1  Score=200.94  Aligned_cols=141  Identities=29%  Similarity=0.505  Sum_probs=126.8

Q ss_pred             CCCCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCC-C-CCEEEECCCCCC------CCHHHHHHHHHH
Q ss_conf             69999537389389839211189999883998589966889854457-9-708995458983------038999999999
Q 027835           44 VSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYK-N-SFTYHCLEDDKI------LQFDDAIQFLEQ  115 (218)
Q Consensus        44 ~~~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~-~-~~~~~~i~~~~~------~~~~~~~~fI~~  115 (218)
                      ...+|++|.| +||+|+...+.+.+.|++.||++|||+..+.+..+. . ++.|+.+|..|.      ..|+++++||++
T Consensus         2 ~~~~p~~I~~-~lylg~~~~~~d~~~L~~~gI~~Vi~l~~~~~~~~~~~~~i~~~~ipi~D~~~~~l~~~~~~~~~fi~~   80 (155)
T 2hxp_A            2 LASFPVQILP-NLYLGSARDSANLESLAKLGIRYILNVTPNLPNFFEKNGDFHYKQIPISDHWSQNLSRFFPEAIEFIDE   80 (155)
T ss_dssp             --CCCEEEET-TEEEECTTGGGCHHHHHHTTEEEEEECSSSCCCTTTTCTTCEEEECCCCGGGGGGHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEC-CEEECCHHHHCCHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf             9999707789-989988424049999998799999996898730024789768999878669987889999999999999


Q ss_pred             HHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             9866994999829988378999999999844999999999999769986589989999999999980798
Q 027835          116 CERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSV  185 (218)
Q Consensus       116 ~~~~~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~~~  185 (218)
                      .+..+++|||||.+|++||+++++||||+..+|++++|+++|+.+||.+.||++|++||.+||.++.+.-
T Consensus        81 ~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~~~~~~  150 (155)
T 2hxp_A           81 ALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKKSNISPNFNFMGQLLDFERSLREGH  150 (155)
T ss_dssp             HHHTTCEEEEECSSSSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHCSCCCCCHHHHHHHHHHHHHHC---
T ss_pred             HHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             9974993999899998660999999999983999999999999979986899879999999999862666


No 10 
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=1.00  E-value=1  Score=199.34  Aligned_cols=147  Identities=25%  Similarity=0.311  Sum_probs=133.3

Q ss_pred             CCCCCCCEEECCCEEECCHHHCCCHHHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCC------CCHHHHHHHHHHH
Q ss_conf             3699995373893898392111899998839985899668898544579708995458983------0389999999999
Q 027835           43 QVSAFPSEILPDFLYLGSYDNASRSGLLKTQGISRVLNTVPSCQNLYKNSFTYHCLEDDKI------LQFDDAIQFLEQC  116 (218)
Q Consensus        43 ~~~~~p~~I~~~~LylG~~~~a~~~~~l~~~gI~~Iinl~~~~~~~~~~~~~~~~i~~~~~------~~~~~~~~fI~~~  116 (218)
                      .....+++|.| +||+|+...+.+.+.|++.||++|||+..+.+..+..++.|+.+|..|.      ..|..+++||+..
T Consensus         7 ~~~~~~~~I~~-~l~lg~~~~~~d~~~L~~~gI~~Vi~l~~~~~~~~~~~~~~~~ip~~D~~~~~~~~~~~~~~~~i~~~   85 (164)
T 2hcm_A            7 AAPPPFARVAP-ALFIGNARAAGATELLVRAGITLCVNVSRQQPGPRAPGVAELRVPVFDDPAEDLLTHLEPTCAAMEAA   85 (164)
T ss_dssp             SSCCSEEEEET-TEEEEEGGGGGCHHHHHHTTEEEEEECSSSCCCCCCTTCEEEECCCCSCTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEC-CEEECCHHHHCCHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             88998739869-98999854505999999879839998388888778899779999673799761899999999999999


Q ss_pred             HHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             86699499982998837899999999984499999999999976998658998999999999998079899999
Q 027835          117 ERDKACVLVHCMFGKNRSAAIVIAYLMKCKGWRLAQSHQWVKERRPSVNLTEDVHQQLQEYEQKIFGSVDGSNP  190 (218)
Q Consensus       117 ~~~~g~VLVHC~aG~~RS~tvv~aYLm~~~~~sl~~A~~~Vr~~Rp~i~pn~~f~~~L~~~e~~l~~~~~~~~~  190 (218)
                      +..+++|||||.+|++||+++++||||+..+|++++|+++|+.+||.+.||++|++||..||..|.+++++...
T Consensus        86 ~~~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~~~~~A~~~v~~~R~~~~pn~~f~~qL~~~e~~l~~~~~~~~~  159 (164)
T 2hcm_A           86 VRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQTLQAQAILPRE  159 (164)
T ss_dssp             HHTTCEEEEEESSSSHHHHHHHHHHHHHHSCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             98499799988999764899999999998399999999999988998589988999999999998057985667


Done!