BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027838
(218 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7SGU6|PSMG2_NEMVE Proteasome assembly chaperone 2 OS=Nematostella vectensis GN=psmg2
PE=3 SV=1
Length = 244
Score = 94.4 bits (233), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 7/153 (4%)
Query: 17 NLILPALSIGNVGQLAVDLLVSS--TGAETVGYLDDQFVLPCVGNDAYRP--SPRGDLAL 72
LILPA+SIGNVGQLA DL +SS + +GYL D +LP VGNDA+ +G+L L
Sbjct: 18 TLILPAVSIGNVGQLATDLTISSLSSSRHLIGYLHDASILPVVGNDAFARLGHEKGELNL 77
Query: 73 PLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRID 132
+ Y+S+ L ++QQR+P+ KG Y + L + K VV+LS++ R+D
Sbjct: 78 SAEVYQSTEKRLVIVQQRAPISKGHYANYCQKLLAWIKRCSFKQVVLLSSI--SATDRVD 135
Query: 133 MS-SGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 164
G + Y++++ ++L W +L++
Sbjct: 136 AQLQGSPLRYMTTSVSQQLSSSFDKLSWVQLEK 168
>sp|Q869S8|PSMG2_DICDI Proteasome assembly chaperone 2 OS=Dictyostelium discoideum
GN=psmG2 PE=3 SV=1
Length = 269
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 84/135 (62%), Gaps = 6/135 (4%)
Query: 18 LILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRP--SPRGDLALPLQ 75
LI P+L++GN+GQL +D+L+ S + +G++ D+ + P +GND + + G ++ ++
Sbjct: 22 LIWPSLTLGNIGQLTIDVLICSFEFKRIGFIVDENITPIIGNDCFTTLDNNNGIMSTSIE 81
Query: 76 AYESS-SSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMS 134
Y+SS +TL+QQRSP+V G + +++NL + A K ++ LS+ + + R+D
Sbjct: 82 VYQSSLFPSITLVQQRSPIVDGRIPNFSENLFKWINAEEIKEILFLSSSNANK--RVDSQ 139
Query: 135 -SGPQIYYLSSTSVD 148
+G Q+ ++ S +VD
Sbjct: 140 LTGSQVRFIKSDNVD 154
>sp|Q1LXS2|PSMG2_DANRE Proteasome assembly chaperone 2 OS=Danio rerio GN=psmg2 PE=2 SV=1
Length = 260
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Query: 17 NLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPR--GDLALPL 74
LILPA+S+GNVGQLAVDLL+S+ VGY ++P GN+ Y S L+
Sbjct: 16 TLILPAVSVGNVGQLAVDLLISTLNMPRVGYFHTDCLIPMAGNNPYASSTEDAAQLSTSA 75
Query: 75 QAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMS 134
+ Y L ++Q R+P+++ + + K + + +SG V+LS+ + +
Sbjct: 76 EVYSHRDLKLAVLQIRAPIIQTKVKSFRKLMISWMKSSGFLRTVLLSSAHAYQRDDQQLH 135
Query: 135 SGPQIYYLSSTSVDGTDDYCEQLGWKRLQEYN 166
P Y LS + E+LGW+ +++ +
Sbjct: 136 GTPLRYMLSPSLEKEERQRFEELGWREMEKIS 167
>sp|Q2NL24|PSMG2_BOVIN Proteasome assembly chaperone 2 OS=Bos taurus GN=PSMG2 PE=2 SV=1
Length = 264
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 17 NLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPR--GDLALPL 74
L++PA+S+GNVGQLA+DL++S+ +GY ++P VGN+ Y + +L++
Sbjct: 16 TLLMPAVSVGNVGQLAIDLIISTLNMHKIGYFYTDCLVPMVGNNPYATAEENSAELSINA 75
Query: 75 QAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMS 134
+ Y S L +Q RS +K + + L + SG VVVLS+ + +
Sbjct: 76 EVYALPSKKLVALQLRSIFIKYKSKSFCEKLLSWVKCSGCAKVVVLSSSHSYHRNDLQLR 135
Query: 135 SGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 164
S P Y L+ + + + L W+ +++
Sbjct: 136 STPFRYLLTPSMQKSVQNKIQSLNWEEMEK 165
>sp|Q969U7|PSMG2_HUMAN Proteasome assembly chaperone 2 OS=Homo sapiens GN=PSMG2 PE=1 SV=1
Length = 264
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 17 NLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSP--RGDLALPL 74
L++PA+S+GNVGQLA+DL++S+ +GY ++P VGN+ Y + +L++
Sbjct: 16 TLLMPAVSVGNVGQLAMDLIISTLNMSKIGYFYTDCLVPMVGNNPYATTEGNSTELSINA 75
Query: 75 QAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMS 134
+ Y S L +Q RS +K + + L + +SG V+VLS+ + + +
Sbjct: 76 EVYSLPSRKLVALQLRSIFIKYKSKPFCEKLLSWVKSSGCARVIVLSSSHSYQRNDLQLR 135
Query: 135 SGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 164
S P Y L+ + + + L W+ +++
Sbjct: 136 STPFRYLLTPSMQKSVQNKIKSLNWEEMEK 165
>sp|Q7SYV1|PSMG2_XENLA Proteasome assembly chaperone 2 OS=Xenopus laevis GN=psmg2 PE=2
SV=1
Length = 259
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 14 SCSNLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPRG--DLA 71
S S L+LPA+S+GNVGQLA+DL++S+ VGY ++P VGN+ Y + +L
Sbjct: 13 SVSTLLLPAISVGNVGQLAIDLIISTLNIPKVGYFYTDCLVPMVGNNPYETNEENAKELC 72
Query: 72 LPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRI 131
+ Y S L ++Q RS V+K + + L + V+ LS+
Sbjct: 73 TNAEVYALPSQKLAVLQLRSLVIKKKSKSFRQALVSWIKRCAFARVIFLSSCHAYHRDDK 132
Query: 132 DMSSGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 164
+ P Y ++ D +L WK +++
Sbjct: 133 QLFGTPFRYLVTPALQKSVADVLSELEWKEMEK 165
>sp|Q9EST4|PSMG2_MOUSE Proteasome assembly chaperone 2 OS=Mus musculus GN=Psmg2 PE=2 SV=1
Length = 264
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 17 NLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPR--GDLALPL 74
L++PA+S+GNVGQLA+DL++S+ +GY ++P VGN+ Y +L++
Sbjct: 16 TLLMPAVSVGNVGQLAIDLIISTLNMCKIGYFYTDCLVPMVGNNPYATEEENSNELSINT 75
Query: 75 QAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMS 134
+ Y S L ++Q RS +K + + L + +SG ++VLS+ +
Sbjct: 76 EVYSLPSKKLVVLQLRSIFIKYKSKSFCEKLLAWVESSGCARIIVLSSSHSYHRNDAQLR 135
Query: 135 SGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 164
S P Y L+ + + L W +++
Sbjct: 136 STPFRYLLTPCLQKSVQNKIKSLNWLEMEK 165
>sp|Q5XGC5|PSMG2_XENTR Proteasome assembly chaperone 2 OS=Xenopus tropicalis GN=psmg2 PE=2
SV=1
Length = 261
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 17 NLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGNDAYRPSPRG--DLALPL 74
L+LPA+S+GNVGQLA+DL++S+ VGY ++P VG++ Y +L
Sbjct: 16 TLLLPAISVGNVGQLAIDLIISTLKIPKVGYFYTDCLVPMVGSNPYETDEENAKELCTNA 75
Query: 75 QAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQRIDMS 134
+ Y S L ++Q RS V+K + + L + V++LS+ +
Sbjct: 76 EVYALPSQKLAVLQLRSLVIKKKSKSFRQALVSWIKRCAFARVILLSSCHAYHRDDTQLF 135
Query: 135 SGPQIYYLSSTSVDGTDDYCEQLGWKRLQE 164
P Y ++ D ++L WK +++
Sbjct: 136 GTPFRYLVTPALQKSVADVLKELEWKEMEK 165
>sp|P36040|POC2_YEAST Proteasome assembly chaperone 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ADD66 PE=1 SV=1
Length = 267
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 16 SNLILPALSIGNVGQLAVDLLVSSTGAET--VGYLDDQFVLPCV--------GNDAYRPS 65
S L+LP +S+GN+ QL++D L++S E + LD ++++ V G+D+
Sbjct: 2 SCLVLPLVSVGNIPQLSIDWLLNSQANEWEYLEALDSKYLVEFVGPLDRPEDGSDSLYKD 61
Query: 66 PRGDLALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNL 105
+ L+ + + GL IQQR+P+V V Y N
Sbjct: 62 ADMKYSSALEVFYNKKRGLFAIQQRTPLVS---VNYLNNF 98
>sp|P25994|CARB_BACSU Carbamoyl-phosphate synthase pyrimidine-specific large chain
OS=Bacillus subtilis (strain 168) GN=pyrAB PE=3 SV=1
Length = 1071
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 39 STGAETVGYLDDQFVLPCVGNDAYRPSPRGDLALPLQAYESSSSGLTLIQQRSPVVKGMM 98
+ G VG L+ QFVL +PR +P + S +G+ + + ++ G
Sbjct: 808 AKGLNIVGLLNIQFVLSQGEVYVLEVNPRSSRTVP---FLSKITGIPMANLATKIILG-- 862
Query: 99 VEYAKNLADFAAASG---NKHVVVLSA--LDFGRLQRIDMSSGPQIYYLSSTSVDGTDDY 153
+ LA F G + V + A F +L+R+D++ GP++ S+ V G D
Sbjct: 863 ----QKLAAFGYTEGLQPEQQGVFVKAPVFSFAKLRRVDITLGPEMK--STGEVMGKDST 916
Query: 154 CEQLGWKRL 162
E+ +K L
Sbjct: 917 LEKALYKAL 925
>sp|O50302|CARB_GEOSE Carbamoyl-phosphate synthase pyrimidine-specific large chain
OS=Geobacillus stearothermophilus GN=pyrAB PE=3 SV=1
Length = 1064
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 1 MEFVLEEGKHLSESCSNLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGND 60
ME + G H +S + LS + ++ + + G VG L+ QFV+ G+D
Sbjct: 770 MEHIERAGVHSGDSIAVYPPQTLSDDVIAKITDYTVKLARGLHIVGLLNIQFVV--AGSD 827
Query: 61 AY--RPSPRGDLALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHV- 117
Y +PR +P + S +G+ + + + G LAD +G V
Sbjct: 828 VYVLEVNPRSSRTVP---FLSKITGVPMANLATKAILG------AKLADMGYETGVCPVR 878
Query: 118 ----VVLSALDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRL 162
V + F +L+ +D+S GP++ S+ V G D E+ +K L
Sbjct: 879 PGVYVKVPVFSFAKLRNVDISLGPEMK--STGEVIGKDVTFEKALYKGL 925
>sp|Q9PHX2|HEM1_CAMJE Glutamyl-tRNA reductase OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=hemA PE=1 SV=1
Length = 432
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 85 TLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQ-RIDMSSGPQIYYLS 143
T I + S V + V AK LAD K VV+ A + G L + +++G ++ L+
Sbjct: 154 TQISKNSISVASVAVAKAKELADLT----QKKAVVIGAGEMGELAAKHLIAAGAKVIILN 209
Query: 144 STSVDGTDDYCEQLGWKRLQEYNPAQRGWKYLS 176
+ D CE+LG L EY+ + KYL+
Sbjct: 210 R-DLQKAKDLCERLGV--LSEYDSLENLKKYLN 239
>sp|A1VYQ1|HEM1_CAMJJ Glutamyl-tRNA reductase OS=Campylobacter jejuni subsp. jejuni
serotype O:23/36 (strain 81-176) GN=hemA PE=3 SV=1
Length = 432
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 85 TLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQ-RIDMSSGPQIYYLS 143
T I + S V + V AK LAD K VV+ A + G L + +++G ++ L+
Sbjct: 154 TQISKNSISVASVAVAKAKELADLT----QKKAVVIGAGEMGELAAKHLIAAGAKVIILN 209
Query: 144 STSVDGTDDYCEQLGWKRLQEYNPAQRGWKYLS 176
+ D CE+LG L EY+ + KYL+
Sbjct: 210 R-DLQKAKDLCERLGV--LSEYDSLENLKKYLN 239
>sp|P46537|CARB_BACCL Carbamoyl-phosphate synthase pyrimidine-specific large chain
OS=Bacillus caldolyticus GN=pyrAB PE=3 SV=1
Length = 1065
Score = 33.1 bits (74), Expect = 1.4, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 1 MEFVLEEGKHLSESCSNLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGND 60
ME + G H +S + LS + ++A + + G VG L+ QFV+ G+D
Sbjct: 770 MEHIERAGVHSGDSIAVYPPQTLSAEVIDKIADYTIRLARGLHIVGLLNIQFVVS--GSD 827
Query: 61 AY--RPSPRGDLALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHV- 117
Y +PR +P + S +G+ + + + G LA+ +G V
Sbjct: 828 VYVLEVNPRSSRTVP---FLSKITGVPMANLATKAILGT------KLAEMGYETGVCPVR 878
Query: 118 ----VVLSALDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRL 162
V + F +L+ +D+S GP++ S+ V G D E+ +K L
Sbjct: 879 PGVYVKVPVFSFAKLRNVDISLGPEMK--STGEVIGKDVTFEKALYKGL 925
>sp|A8FKW5|HEM1_CAMJ8 Glutamyl-tRNA reductase OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=hemA PE=3
SV=1
Length = 432
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 90 RSPV-VKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQ-RIDMSSGPQIYYLSSTSV 147
++P+ V + V AK LAD A K VV+ A + G L + +++G ++ L+ +
Sbjct: 158 KNPISVASVAVAKAKELADLA----QKKAVVIGAGEMGELAAKHLIAAGAKVIILNR-DL 212
Query: 148 DGTDDYCEQLGWKRLQEYNPAQRGWKYLS 176
D CE+LG L EY+ + KYL+
Sbjct: 213 QKAKDLCERLGV--LSEYDSLENLKKYLN 239
>sp|Q4L5Q5|CARB_STAHJ Carbamoyl-phosphate synthase large chain OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=carB PE=3 SV=1
Length = 1057
Score = 32.7 bits (73), Expect = 2.0, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Query: 1 MEFVLEEGKHLSESCSNLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQFVLPCVGND 60
ME + G H +S + LS ++ L + + G VG ++ QFV+ G
Sbjct: 770 MEHIERAGVHSGDSIAVYPPQTLSQEDIDTLEDYTIKLAKGLNIVGLINIQFVIAHDGVY 829
Query: 61 AYRPSPRGDLALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVL 120
+PR +P S +T IQ ++ +M K+L V +
Sbjct: 830 VLEVNPRASRTVPFL------SKITDIQMAQLAMQAIMGTRLKDLGYKQGVQPYSEGVFV 883
Query: 121 SA--LDFGRLQRIDMSSGPQIYYLSSTSVDGTDDYCEQLGWKRL 162
A F +L+ +D++ GP++ S+ V G D E+ +K L
Sbjct: 884 KAPVFSFNKLKNVDVTLGPEMK--STGEVMGKDLTLEKALYKGL 925
>sp|A7H4K0|HEM1_CAMJD Glutamyl-tRNA reductase OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=hemA PE=3
SV=1
Length = 432
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 85 TLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFGRLQ-RIDMSSGPQIYYLS 143
T I ++ V + V AK LAD K VV+ A + G L + +++G ++ L+
Sbjct: 154 TQISKKPISVASVAVAKAKELADLT----QKKAVVIGAGEMGELAAKHLIAAGAKVIILN 209
Query: 144 STSVDGTDDYCEQLGWKRLQEYNPAQRGWKYLS 176
+ D CE+LG L EY+ + KYL+
Sbjct: 210 R-DLQKAKDLCERLGV--LSEYDSLENLKKYLN 239
>sp|Q819I5|PPK_BACCR Polyphosphate kinase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=ppk PE=3 SV=1
Length = 702
Score = 31.6 bits (70), Expect = 4.7, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 13 ESCSNLILPALSIGNVGQLAVDLLVSSTGAETVGYLDDQF--VLPCVGNDAYRPSP 66
++ N +LPAL + + +L + L Y D+Q VL V DAYRP P
Sbjct: 106 DTFKNYVLPALELEGIERLTFNDLTKEQREFIEEYFDEQIFPVLTPVAIDAYRPFP 161
>sp|Q9FJB5|RP8L3_ARATH Disease resistance RPP8-like protein 3 OS=Arabidopsis thaliana
GN=RPP8L3 PE=2 SV=1
Length = 901
Score = 30.8 bits (68), Expect = 7.3, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 151 DDYCEQLGWKRLQEYNPAQRGWKY-LSSLAEG 181
DD ++ W R++E P +RGWK L+S EG
Sbjct: 271 DDVWKEEDWDRIKEVFPRKRGWKMLLTSRNEG 302
>sp|A1D6T6|EIF3E_NEOFI Eukaryotic translation initiation factor 3 subunit E OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=int6 PE=3 SV=1
Length = 455
Score = 30.4 bits (67), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%)
Query: 67 RGDLALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFG 126
R ++ LQ YE S+ +T + Q VV + + NL G +V S D+G
Sbjct: 100 REEVLAKLQQYEEESAKITQLLQDESVVANLRSDKVANLKFLEEQHGVTIEMVNSLYDYG 159
Query: 127 RLQ 129
R Q
Sbjct: 160 RFQ 162
>sp|B0XXL3|EIF3E_ASPFC Eukaryotic translation initiation factor 3 subunit E OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=int6 PE=3 SV=1
Length = 451
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%)
Query: 67 RGDLALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFG 126
R ++ LQ YE S+ +T + Q VV + + NL G +V S D+G
Sbjct: 100 REEVLAKLQQYEEESAKITQLLQDESVVANLRSDKVANLKFLEEQHGVTVEMVNSLYDYG 159
Query: 127 RLQ 129
R Q
Sbjct: 160 RFQ 162
>sp|Q4WY08|EIF3E_ASPFU Eukaryotic translation initiation factor 3 subunit E OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=int6 PE=3 SV=1
Length = 451
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%)
Query: 67 RGDLALPLQAYESSSSGLTLIQQRSPVVKGMMVEYAKNLADFAAASGNKHVVVLSALDFG 126
R ++ LQ YE S+ +T + Q VV + + NL G +V S D+G
Sbjct: 100 REEVLAKLQQYEEESAKITQLLQDESVVANLRSDKVANLKFLEEQHGVTVEMVNSLYDYG 159
Query: 127 RLQ 129
R Q
Sbjct: 160 RFQ 162
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,407,387
Number of Sequences: 539616
Number of extensions: 3425936
Number of successful extensions: 8350
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 8325
Number of HSP's gapped (non-prelim): 35
length of query: 218
length of database: 191,569,459
effective HSP length: 113
effective length of query: 105
effective length of database: 130,592,851
effective search space: 13712249355
effective search space used: 13712249355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)