Query 027841
Match_columns 218
No_of_seqs 290 out of 1539
Neff 6.0
Searched_HMMs 46136
Date Fri Mar 29 16:01:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027841.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027841hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 4.8E-48 1E-52 341.7 14.0 151 68-218 69-225 (369)
2 PLN03158 methionine aminopepti 100.0 1.6E-38 3.6E-43 294.4 18.5 151 68-218 90-246 (396)
3 COG0024 Map Methionine aminope 100.0 2.2E-28 4.8E-33 214.8 14.0 110 109-218 4-115 (255)
4 PRK12897 methionine aminopepti 99.9 2.6E-25 5.7E-30 193.3 15.0 111 108-218 2-113 (248)
5 PRK12318 methionine aminopepti 99.9 1.3E-24 2.9E-29 194.1 16.0 111 108-218 41-154 (291)
6 TIGR00500 met_pdase_I methioni 99.9 2.9E-24 6.4E-29 185.6 15.1 110 109-218 2-112 (247)
7 PRK07281 methionine aminopepti 99.9 2E-24 4.3E-29 192.8 14.2 112 107-218 1-144 (286)
8 PRK12896 methionine aminopepti 99.9 7.5E-24 1.6E-28 183.4 15.2 112 107-218 7-119 (255)
9 PRK09795 aminopeptidase; Provi 99.9 6.7E-24 1.4E-28 193.5 12.9 110 104-218 121-231 (361)
10 PRK05716 methionine aminopepti 99.9 6.1E-23 1.3E-27 177.5 14.6 112 107-218 2-114 (252)
11 COG0006 PepP Xaa-Pro aminopept 99.9 5.5E-23 1.2E-27 188.7 12.7 110 104-218 148-258 (384)
12 PRK10879 proline aminopeptidas 99.9 3.1E-22 6.8E-27 187.7 14.2 107 106-217 169-276 (438)
13 TIGR02993 ectoine_eutD ectoine 99.9 1.5E-21 3.3E-26 180.2 11.2 114 104-218 152-266 (391)
14 TIGR00495 crvDNA_42K 42K curve 99.9 8.2E-21 1.8E-25 176.0 14.1 110 108-218 11-129 (389)
15 cd01086 MetAP1 Methionine Amin 99.8 2.4E-20 5.3E-25 160.0 13.7 103 116-218 1-104 (238)
16 PRK15173 peptidase; Provisiona 99.8 2.3E-20 4.9E-25 168.8 12.7 109 104-218 89-198 (323)
17 cd01087 Prolidase Prolidase. E 99.8 4.2E-20 9.2E-25 159.3 12.9 96 116-217 1-97 (243)
18 PRK14575 putative peptidase; P 99.8 3.8E-20 8.3E-25 171.9 13.0 109 104-218 172-281 (406)
19 PRK13607 proline dipeptidase; 99.8 2.1E-20 4.6E-25 175.8 11.3 106 105-216 156-263 (443)
20 cd01090 Creatinase Creatine am 99.8 7E-20 1.5E-24 157.9 13.3 103 116-218 1-105 (228)
21 PRK14576 putative endopeptidas 99.8 5.1E-20 1.1E-24 171.0 13.2 109 104-218 171-280 (405)
22 cd01092 APP-like Similar to Pr 99.8 1.6E-19 3.4E-24 150.7 12.7 98 116-218 1-99 (208)
23 PTZ00053 methionine aminopepti 99.8 3.3E-19 7.2E-24 168.3 14.7 107 106-218 148-262 (470)
24 TIGR00501 met_pdase_II methion 99.8 1.9E-18 4.2E-23 154.6 13.9 98 113-218 2-103 (295)
25 PF00557 Peptidase_M24: Metall 99.8 2E-18 4.3E-23 144.7 12.7 97 117-218 1-99 (207)
26 cd01085 APP X-Prolyl Aminopept 99.8 2.4E-18 5.3E-23 148.3 11.0 97 117-218 5-107 (224)
27 cd01089 PA2G4-like Related to 99.8 6.4E-18 1.4E-22 145.2 13.1 103 116-218 1-111 (228)
28 PRK08671 methionine aminopepti 99.8 5.8E-18 1.3E-22 151.1 13.2 96 115-218 1-100 (291)
29 cd01066 APP_MetAP A family inc 99.8 8.3E-18 1.8E-22 138.0 11.6 97 116-218 1-98 (207)
30 cd01088 MetAP2 Methionine Amin 99.7 4E-17 8.6E-22 145.8 12.9 95 116-218 1-99 (291)
31 KOG2737 Putative metallopeptid 99.7 5.2E-17 1.1E-21 148.6 8.1 112 103-218 178-294 (492)
32 KOG2414 Putative Xaa-Pro amino 99.6 1.3E-15 2.9E-20 140.4 7.5 109 105-218 223-332 (488)
33 cd01091 CDC68-like Related to 99.5 1.4E-13 3E-18 120.2 10.4 102 116-218 1-116 (243)
34 KOG2776 Metallopeptidase [Gene 99.3 1.4E-11 3E-16 112.3 9.8 109 108-218 13-131 (398)
35 KOG2775 Metallopeptidase [Gene 98.7 1.6E-07 3.5E-12 84.6 10.3 101 111-217 80-188 (397)
36 KOG2413 Xaa-Pro aminopeptidase 98.5 2E-07 4.2E-12 90.1 6.9 110 105-218 302-422 (606)
37 cd01092 APP-like Similar to Pr 98.3 1.6E-05 3.5E-10 66.1 11.9 95 117-218 103-204 (208)
38 cd01066 APP_MetAP A family inc 98.2 2.5E-05 5.4E-10 63.8 12.1 100 117-218 102-203 (207)
39 PRK09795 aminopeptidase; Provi 98.2 3.1E-05 6.7E-10 70.9 12.5 103 113-218 236-341 (361)
40 PRK15173 peptidase; Provisiona 98.1 4.4E-05 9.6E-10 69.3 12.0 99 117-218 202-305 (323)
41 cd01090 Creatinase Creatine am 98.1 6.3E-05 1.4E-09 64.9 11.6 98 118-218 110-219 (228)
42 PRK14576 putative endopeptidas 98.0 7.1E-05 1.5E-09 69.9 12.0 99 117-218 284-387 (405)
43 PRK14575 putative peptidase; P 98.0 7.6E-05 1.6E-09 69.7 12.1 98 118-218 286-388 (406)
44 cd01086 MetAP1 Methionine Amin 98.0 0.00011 2.3E-09 63.0 12.1 98 118-218 109-229 (238)
45 PRK05716 methionine aminopepti 98.0 0.0001 2.2E-09 63.6 11.4 98 118-218 119-239 (252)
46 TIGR00500 met_pdase_I methioni 97.9 0.0002 4.4E-09 61.8 12.4 98 118-218 117-237 (247)
47 KOG1189 Global transcriptional 97.9 3E-05 6.5E-10 76.9 6.8 110 104-217 131-253 (960)
48 TIGR02993 ectoine_eutD ectoine 97.8 0.00025 5.3E-09 65.9 11.8 102 110-218 265-373 (391)
49 PF00557 Peptidase_M24: Metall 97.8 0.00016 3.5E-09 60.3 9.3 97 119-218 104-206 (207)
50 PRK12897 methionine aminopepti 97.8 0.00028 6E-09 61.4 10.6 98 118-218 118-238 (248)
51 cd01087 Prolidase Prolidase. E 97.7 0.00036 7.8E-09 60.1 11.0 100 118-218 104-234 (243)
52 cd01091 CDC68-like Related to 97.7 0.00037 7.9E-09 61.0 10.7 100 117-218 119-233 (243)
53 cd01089 PA2G4-like Related to 97.7 0.00045 9.8E-09 59.3 10.7 96 117-218 120-219 (228)
54 PRK12896 methionine aminopepti 97.7 0.00056 1.2E-08 59.2 11.2 98 118-218 124-245 (255)
55 COG0006 PepP Xaa-Pro aminopept 97.7 0.00047 1E-08 63.6 11.2 102 109-218 256-366 (384)
56 PRK12318 methionine aminopepti 97.6 0.00096 2.1E-08 59.9 11.7 86 118-206 159-247 (291)
57 PRK07281 methionine aminopepti 97.5 0.00088 1.9E-08 60.2 10.8 85 118-205 149-237 (286)
58 PLN03158 methionine aminopepti 97.5 0.0012 2.6E-08 62.0 11.7 97 119-218 252-371 (396)
59 PRK08671 methionine aminopepti 97.1 0.0046 1E-07 55.4 10.4 86 118-210 102-196 (291)
60 cd01088 MetAP2 Methionine Amin 97.1 0.0042 9E-08 55.7 9.5 86 118-210 101-195 (291)
61 PRK10879 proline aminopeptidas 97.0 0.0096 2.1E-07 56.4 11.9 100 118-218 283-410 (438)
62 cd01085 APP X-Prolyl Aminopept 96.9 0.018 3.9E-07 49.7 12.1 96 119-218 113-215 (224)
63 TIGR00501 met_pdase_II methion 96.8 0.0074 1.6E-07 54.3 9.2 85 119-210 106-199 (295)
64 COG0024 Map Methionine aminope 96.5 0.052 1.1E-06 48.3 12.2 85 117-206 120-210 (255)
65 TIGR00495 crvDNA_42K 42K curve 96.4 0.02 4.3E-07 53.6 9.4 91 118-209 139-238 (389)
66 PRK13607 proline dipeptidase; 96.3 0.039 8.4E-07 52.5 10.8 89 119-207 270-391 (443)
67 PTZ00053 methionine aminopepti 96.3 0.036 7.7E-07 53.3 10.5 93 118-210 264-367 (470)
68 COG5406 Nucleosome binding fac 96.3 0.0058 1.3E-07 60.4 5.0 112 105-217 165-294 (1001)
69 KOG2738 Putative methionine am 93.4 1 2.3E-05 41.3 10.5 87 109-200 223-313 (369)
70 KOG1189 Global transcriptional 81.4 6.1 0.00013 40.5 7.7 97 118-218 258-367 (960)
71 cd01666 TGS_DRG_C TGS_DRG_C: 76.1 11 0.00024 27.3 5.9 52 137-199 21-73 (75)
72 COG5406 Nucleosome binding fac 74.8 11 0.00024 38.1 7.2 81 119-203 300-385 (1001)
73 KOG2413 Xaa-Pro aminopeptidase 60.2 42 0.00091 33.5 7.9 85 118-210 427-522 (606)
74 PRK01490 tig trigger factor; P 59.3 26 0.00057 32.8 6.3 44 140-207 131-174 (435)
75 PF03477 ATP-cone: ATP cone do 57.4 7.7 0.00017 28.1 1.9 36 124-159 39-74 (90)
76 KOG2414 Putative Xaa-Pro amino 55.7 72 0.0016 30.8 8.3 89 110-205 334-438 (488)
77 cd04938 TGS_Obg-like TGS_Obg-l 54.1 26 0.00056 25.3 4.1 47 137-199 28-74 (76)
78 PF05184 SapB_1: Saposin-like 48.3 33 0.00071 20.8 3.5 34 122-155 3-36 (39)
79 TIGR00115 tig trigger factor. 48.0 53 0.0011 30.5 6.3 44 140-207 119-163 (408)
80 COG0544 Tig FKBP-type peptidyl 45.6 50 0.0011 31.7 5.8 44 141-208 132-175 (441)
81 PRK00464 nrdR transcriptional 39.0 85 0.0018 25.9 5.5 40 122-161 84-123 (154)
82 PF10415 FumaraseC_C: Fumarase 38.1 44 0.00096 22.7 3.1 34 118-151 10-48 (55)
83 cd01669 TGS_Ygr210_C TGS_Ygr21 33.6 1.3E+02 0.0028 21.7 5.1 48 137-199 27-74 (76)
84 PF00249 Myb_DNA-binding: Myb- 32.0 1E+02 0.0022 19.6 4.0 43 110-152 3-46 (48)
85 PRK15131 mannose-6-phosphate i 31.8 2.1E+02 0.0045 27.0 7.5 45 18-63 69-113 (389)
86 smart00739 KOW KOW (Kyprides, 31.1 90 0.0019 17.1 3.2 22 191-213 2-24 (28)
87 PF04355 SmpA_OmlA: SmpA / Oml 26.9 47 0.001 23.0 1.8 19 132-150 7-25 (71)
88 COG1163 DRG Predicted GTPase [ 26.6 1.7E+02 0.0037 27.5 5.8 49 138-199 311-362 (365)
89 TIGR03147 cyt_nit_nrfF cytochr 26.4 89 0.0019 25.0 3.5 29 124-152 57-85 (126)
90 PF09506 Salt_tol_Pase: Glucos 25.9 2.6E+02 0.0055 26.4 6.8 51 112-162 98-148 (381)
91 PRK05423 hypothetical protein; 25.8 98 0.0021 23.8 3.4 28 128-155 43-70 (104)
92 KOG2776 Metallopeptidase [Gene 24.5 3.8E+02 0.0083 25.5 7.7 83 122-206 145-236 (398)
93 PF03701 UPF0181: Uncharacteri 24.4 1.3E+02 0.0029 20.4 3.5 30 128-157 15-44 (51)
94 PRK07440 hypothetical protein; 24.3 1.7E+02 0.0037 20.5 4.3 33 171-204 34-67 (70)
95 COG3140 Uncharacterized protei 24.2 1E+02 0.0022 21.4 2.9 30 128-157 15-44 (60)
96 TIGR02399 salt_tol_Pase glucos 23.9 2.9E+02 0.0062 26.2 6.7 51 112-162 104-154 (389)
97 PF12926 MOZART2: Mitotic-spin 23.5 2.2E+02 0.0047 21.5 4.9 52 108-159 20-75 (88)
98 PF09424 YqeY: Yqey-like prote 23.0 3E+02 0.0065 22.2 6.1 26 135-160 85-110 (143)
99 PRK06488 sulfur carrier protei 22.7 1.9E+02 0.004 19.6 4.2 28 172-199 30-58 (65)
100 PRK10144 formate-dependent nit 22.4 1.2E+02 0.0026 24.3 3.5 28 124-151 57-84 (126)
101 PF02824 TGS: TGS domain; Int 21.9 1.2E+02 0.0027 20.4 3.1 46 137-199 13-58 (60)
102 PRK05114 hypothetical protein; 21.4 1.6E+02 0.0035 20.5 3.5 31 128-158 15-45 (59)
103 PF00725 3HCDH: 3-hydroxyacyl- 21.0 2.2E+02 0.0047 20.5 4.5 30 123-152 5-35 (97)
104 PRK05659 sulfur carrier protei 20.8 2.5E+02 0.0053 18.8 4.5 27 173-199 32-59 (66)
105 PF07051 OCIA: Ovarian carcino 20.4 2E+02 0.0044 22.6 4.3 60 108-176 23-82 (111)
106 PLN00190 60S ribosomal protein 20.0 86 0.0019 26.2 2.3 29 189-217 32-67 (158)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-48 Score=341.71 Aligned_cols=151 Identities=64% Similarity=1.010 Sum_probs=142.7
Q ss_pred CCCccccCCCcccCCCCCCCCCCCCCCCccCCCCC----CCCC-CCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 027841 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI----GIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (218)
Q Consensus 68 ~~~~~~~l~~g~~s~~~~vp~~i~~p~Y~~~~~~~----~~~~-~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvT 142 (218)
.|.|+++||||++||+|.||+||+||+|+.+|.+. +... ...|++++||+.||+||+++++++++|+.+++||+|
T Consensus 69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT 148 (369)
T KOG2738|consen 69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT 148 (369)
T ss_pred cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 48899999999999999999999999999996532 2222 467899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 143 e~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
|+|||+++|++++++|+|||||||.+||+++|+|+|+++||||||.|+||+|||||||+++|++|||| +++||+|+
T Consensus 149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG 225 (369)
T KOG2738|consen 149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVG 225 (369)
T ss_pred HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999986
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.6e-38 Score=294.38 Aligned_cols=151 Identities=49% Similarity=0.805 Sum_probs=143.8
Q ss_pred CCCccccCCCcccCCCCCCCCCCCCCCCccCCCCC-----CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 027841 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI-----GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (218)
Q Consensus 68 ~~~~~~~l~~g~~s~~~~vp~~i~~p~Y~~~~~~~-----~~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvT 142 (218)
.|+|+++||||++||++.||+||++|+|+.++.+. .....|+|||++||+.||+||++++++++.+.+.++||+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvT 169 (396)
T PLN03158 90 DFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVT 169 (396)
T ss_pred CCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 48899999999999999999999999999887543 2446799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 143 e~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
|.||+++++++++++|++|++++|.+||+++|+|+|+++|||+|++++|++||+|+||++++++||++ ++|||+|+
T Consensus 170 e~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG 246 (396)
T PLN03158 170 TDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVG 246 (396)
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999985
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=2.2e-28 Score=214.82 Aligned_cols=110 Identities=42% Similarity=0.708 Sum_probs=107.3
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCC-
Q 027841 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD- 187 (218)
Q Consensus 109 ~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~- 187 (218)
.+|+++||+.||+||+|++++++.+.+.++||+|+.|||++++++++++|++|+++||.+||..+|+|+|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 188 SRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+++|++||+|+||+|+.+|||++ +++||.|+
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg 115 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVG 115 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECC
Confidence 67899999999999999999999 99999986
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=99.93 E-value=2.6e-25 Score=193.28 Aligned_cols=111 Identities=33% Similarity=0.576 Sum_probs=105.9
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCC
Q 027841 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (218)
Q Consensus 108 R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~ 187 (218)
..|||++||+.||+|+++++++++++.+.++||+||.||++.+++.+.++|+.....+|.+|+.++|+|+|++.||+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998766667889999999999999999999
Q ss_pred CCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 188 SRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+++|++||+|.+|+++.++||++ ++|||+++
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG 113 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVG 113 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcC
Confidence 99999999999999999999999 99999875
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=99.92 E-value=1.3e-24 Score=194.10 Aligned_cols=111 Identities=34% Similarity=0.595 Sum_probs=105.4
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC--CCCceeeecCCCcccccC
Q 027841 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGI 185 (218)
Q Consensus 108 R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~--~Fp~~v~tg~N~~i~Hgi 185 (218)
++|||++||+.||+|+++++++++++.+.++||+||.||++++++.+.+.|+.+++++|. +||+++|+|.|+.++|+.
T Consensus 41 i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~ 120 (291)
T PRK12318 41 IIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGI 120 (291)
T ss_pred eEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCC
Confidence 469999999999999999999999999999999999999999999999999988877775 599999999999999999
Q ss_pred CCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 186 PDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 186 P~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
|++++|++||+|.+|+++.++||++ ++|||+++
T Consensus 121 p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG 154 (291)
T PRK12318 121 PNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIG 154 (291)
T ss_pred CCCCccCCCCEEEEEEeEEECcEEEEEEEEEECC
Confidence 9999999999999999999999999 99999975
No 6
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=99.92 E-value=2.9e-24 Score=185.62 Aligned_cols=110 Identities=46% Similarity=0.699 Sum_probs=105.7
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCC
Q 027841 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188 (218)
Q Consensus 109 ~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~ 188 (218)
.|||++||+.||+|+++++++++.+.+.++||+||.||++++++.+.++|+.+.+.+|.+||.++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999998777788899999999999999999999
Q ss_pred CccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 189 RALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 189 r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
++|++||+|.+|+++.|+||++ ++|||+++
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG 112 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVG 112 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcC
Confidence 9999999999999999999999 99999985
No 7
>PRK07281 methionine aminopeptidase; Reviewed
Probab=99.92 E-value=2e-24 Score=192.84 Aligned_cols=112 Identities=20% Similarity=0.367 Sum_probs=104.9
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCC----CCCCceeeecCCCccc
Q 027841 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECIC 182 (218)
Q Consensus 107 ~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y----~~Fp~~v~tg~N~~i~ 182 (218)
|..|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.++.+|+ .+||+++|+|.|++++
T Consensus 1 m~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~ 80 (286)
T PRK07281 1 MITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVA 80 (286)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEecccccc
Confidence 357999999999999999999999999999999999999999999999999998877765 4699999999999999
Q ss_pred ccCCCCCccCCCCEEEEEEee---------------------------EeCCEEE-EEEEEEeC
Q 027841 183 HGIPDSRALEDGDTINIDVTV---------------------------YLNVSIF-LHATFYHT 218 (218)
Q Consensus 183 HgiP~~r~Lq~GDiV~IDvg~---------------------------~~~GY~~-~tRTf~V~ 218 (218)
|+.|++++|++||+|+||+++ .++||++ ++|||+++
T Consensus 81 H~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG 144 (286)
T PRK07281 81 HAFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVG 144 (286)
T ss_pred CCCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECC
Confidence 999999999999999999997 4899999 99999874
No 8
>PRK12896 methionine aminopeptidase; Reviewed
Probab=99.91 E-value=7.5e-24 Score=183.43 Aligned_cols=112 Identities=44% Similarity=0.719 Sum_probs=107.0
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCC
Q 027841 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (218)
Q Consensus 107 ~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP 186 (218)
.+.|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+++.+|.+||.++|+|.|+..+|+.|
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~p 86 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGIP 86 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecCC
Confidence 46799999999999999999999999999999999999999999999999999988777888999999999999999999
Q ss_pred CCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 187 DSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 187 ~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
++++|++||+|.+|+++.++||++ ++|||+++
T Consensus 87 ~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG 119 (255)
T PRK12896 87 GPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVG 119 (255)
T ss_pred CCccCCCCCEEEEEEeEEECcEEEeeEEEEECC
Confidence 999999999999999999999999 99999875
No 9
>PRK09795 aminopeptidase; Provisional
Probab=99.91 E-value=6.7e-24 Score=193.50 Aligned_cols=110 Identities=15% Similarity=0.231 Sum_probs=104.8
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc
Q 027841 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (218)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~H 183 (218)
+..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+ .+|+++|++|.|++.||
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEK-----ASFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCc-----CCCCeEEEEeccccccC
Confidence 4578999999999999999999999999999999999999999999999999999986 36999999999999999
Q ss_pred cCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 184 GIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 184 giP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+.|++++|++||+|++|+|+.|+||++ ++|||+++
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g 231 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVN 231 (361)
T ss_pred CCCCCceecCCCEEEEEeccccCCEeecceEEEEeC
Confidence 999999999999999999999999999 99999883
No 10
>PRK05716 methionine aminopeptidase; Validated
Probab=99.90 E-value=6.1e-23 Score=177.46 Aligned_cols=112 Identities=50% Similarity=0.799 Sum_probs=106.1
Q ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCC
Q 027841 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (218)
Q Consensus 107 ~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP 186 (218)
+..|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.++|+.+.+.+|.+|+.++++|.|+..+|+.|
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~ 81 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIP 81 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCC
Confidence 35799999999999999999999999999999999999999999999999999887767778999999999999999999
Q ss_pred CCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 187 DSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 187 ~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
++++|++||+|.+|+++.++||++ ++|||+++
T Consensus 82 ~~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG 114 (252)
T PRK05716 82 SDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVG 114 (252)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEeEEEEECC
Confidence 999999999999999999999999 99999975
No 11
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.89 E-value=5.5e-23 Score=188.75 Aligned_cols=110 Identities=25% Similarity=0.295 Sum_probs=104.6
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc
Q 027841 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (218)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~H 183 (218)
+..+|+|||++||+.||+|+++++.++..+.+.++||+||.||.+.++..++++|+.. .+|+++|++|.|+++||
T Consensus 148 i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~-----~sf~~iv~~G~n~a~pH 222 (384)
T COG0006 148 VDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEG-----PSFDTIVASGENAALPH 222 (384)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----cCcCcEEeccccccCcC
Confidence 3468999999999999999999999999999999999999999999999999999765 25999999999999999
Q ss_pred cCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 184 GIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 184 giP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+.|+++.+++||+|+||+|+.|+||++ +||||.++
T Consensus 223 ~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G 258 (384)
T COG0006 223 YTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIG 258 (384)
T ss_pred CCCCcccccCCCEEEEEeeeEECCccccceeEEecC
Confidence 999999999999999999999999999 99999986
No 12
>PRK10879 proline aminopeptidase P II; Provisional
Probab=99.88 E-value=3.1e-22 Score=187.69 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=101.8
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccC
Q 027841 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (218)
Q Consensus 106 ~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hgi 185 (218)
.+|+|||++||+.||+|+++++++++++.+.++||+||.||++.+++.+.++|+.. .+|+++|++|.|++++|+.
T Consensus 169 ~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~na~~~H~~ 243 (438)
T PRK10879 169 EMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCILHYT 243 (438)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCccccccCC
Confidence 47999999999999999999999999999999999999999999999999999864 2588999999999999999
Q ss_pred CCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEe
Q 027841 186 PDSRALEDGDTINIDVTVYLNVSIF-LHATFYH 217 (218)
Q Consensus 186 P~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V 217 (218)
|++++|++||+|++|+|+.++||++ ++|||+|
T Consensus 244 ~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v 276 (438)
T PRK10879 244 ENESEMRDGDLVLIDAGCEYKGYAGDITRTFPV 276 (438)
T ss_pred CCccccCCCCEEEEEeCeEECCEEEEeEEEEEE
Confidence 9999999999999999999999999 9999987
No 13
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.86 E-value=1.5e-21 Score=180.22 Aligned_cols=114 Identities=15% Similarity=0.146 Sum_probs=97.0
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc
Q 027841 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (218)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~H 183 (218)
+..+|+|||++||++||+|+++++++++.+.+.++||+||.||.+.+.+.... +.......|..|.+++.+|.|++.+|
T Consensus 152 ~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~-~~~~~g~~~~~~~~iv~sG~~~a~pH 230 (391)
T TIGR02993 152 VNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIR-GVDGFGGDYPAIVPLLPSGADASAPH 230 (391)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhh-cccCcCCCcCCcccccccCccccCCC
Confidence 45789999999999999999999999999999999999999999988755432 11100001234667778999999999
Q ss_pred cCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 184 GIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 184 giP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+.|++++|++||+|++|+++.|+||++ ++|||+++
T Consensus 231 ~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG 266 (391)
T TIGR02993 231 LTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLG 266 (391)
T ss_pred CCCCCCcccCCCEEEEEeeeecccCccceeEEEEcC
Confidence 999999999999999999999999999 99999975
No 14
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.85 E-value=8.2e-21 Score=176.03 Aligned_cols=110 Identities=23% Similarity=0.331 Sum_probs=96.2
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCC----CCCCCceeeecCCCcccc
Q 027841 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLG----YGGFPKSVCTSVNECICH 183 (218)
Q Consensus 108 R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~----Y~~Fp~~v~tg~N~~i~H 183 (218)
-.+|+++||+.||+|++|++++++.+.+.++||+|+.||+..+++++.++++. .+.+ +.+|+..+|+|+|+++||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 46999999999999999999999999999999999999999999999987653 2222 344444457889999999
Q ss_pred cCC--C--CCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 184 GIP--D--SRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 184 giP--~--~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
++| + ++.|++||+|+||+|+.++||++ ++|||+|+
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG 129 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVG 129 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEEC
Confidence 999 2 48999999999999999999999 99999985
No 15
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.84 E-value=2.4e-20 Score=159.97 Aligned_cols=103 Identities=54% Similarity=0.909 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 027841 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (218)
Q Consensus 116 Ie~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GD 195 (218)
|+.||+|+++++++++.+.+.++||+||.||++.+.+.+.++|+.+.+.+|.+|+..+++|.|++.+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999988778888999999999999999999999999999
Q ss_pred EEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 196 TINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 196 iV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+|.+|+++.++||++ ++|||+++
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G 104 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVG 104 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECC
Confidence 999999999999999 99999985
No 16
>PRK15173 peptidase; Provisional
Probab=99.84 E-value=2.3e-20 Score=168.81 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=96.4
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc
Q 027841 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (218)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~H 183 (218)
+..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.+.|... |..| .++.+|.+ ..+|
T Consensus 89 i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~~-~~~h 162 (323)
T PRK15173 89 FNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD-FSPK 162 (323)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECCC-CccC
Confidence 4578999999999999999999999999999999999999999999998888876543 2223 45667776 5689
Q ss_pred cCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 184 GIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 184 giP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+.|+++++++||+|++|+++.++||++ ++|||+++
T Consensus 163 ~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG 198 (323)
T PRK15173 163 LIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVG 198 (323)
T ss_pred CCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcC
Confidence 999999999999999999999999999 99999975
No 17
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=99.83 E-value=4.2e-20 Score=159.30 Aligned_cols=96 Identities=24% Similarity=0.298 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 027841 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (218)
Q Consensus 116 Ie~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GD 195 (218)
|++||+|+++++++++.+.+.++||+||.||++.+++.+.++|+++ .|+.++++|.|+..+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999883 4788999999999999999999999999
Q ss_pred EEEEEEeeEeCCEEE-EEEEEEe
Q 027841 196 TINIDVTVYLNVSIF-LHATFYH 217 (218)
Q Consensus 196 iV~IDvg~~~~GY~~-~tRTf~V 217 (218)
+|++|+++.++||++ ++|||++
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~v 97 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPV 97 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEe
Confidence 999999999999999 9999987
No 18
>PRK14575 putative peptidase; Provisional
Probab=99.83 E-value=3.8e-20 Score=171.90 Aligned_cols=109 Identities=17% Similarity=0.182 Sum_probs=97.1
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc
Q 027841 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (218)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~H 183 (218)
+..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.+++.+.+.|.... ..| +++.+|.+ ..+|
T Consensus 172 l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~~~-~~v~~G~~-~~~h 245 (406)
T PRK14575 172 FNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLISVGAD-FSPK 245 (406)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----CcC-ceEEECCC-cccC
Confidence 34689999999999999999999999999999999999999999999998888776541 123 46777877 5789
Q ss_pred cCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 184 GIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 184 giP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+.|++++|++||+|++|+|+.++||++ ++|||+++
T Consensus 246 ~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG 281 (406)
T PRK14575 246 LIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVG 281 (406)
T ss_pred CCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECC
Confidence 999999999999999999999999999 99999975
No 19
>PRK13607 proline dipeptidase; Provisional
Probab=99.83 E-value=2.1e-20 Score=175.80 Aligned_cols=106 Identities=14% Similarity=0.108 Sum_probs=93.0
Q ss_pred CCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccc
Q 027841 105 VSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG 184 (218)
Q Consensus 105 ~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hg 184 (218)
..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.+.... ..++.. .+|+++|++|.|++++|+
T Consensus 156 ~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~~H~ 229 (443)
T PRK13607 156 HYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAVLHY 229 (443)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceEecC
Confidence 46799999999999999999999999999999999999999998654332 223221 368899999999999999
Q ss_pred CCCCC-ccCCCCEEEEEEeeEeCCEEE-EEEEEE
Q 027841 185 IPDSR-ALEDGDTINIDVTVYLNVSIF-LHATFY 216 (218)
Q Consensus 185 iP~~r-~Lq~GDiV~IDvg~~~~GY~~-~tRTf~ 216 (218)
.|+++ ++++||+|++|+|+.++||++ ++|||+
T Consensus 230 ~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~ 263 (443)
T PRK13607 230 TKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA 263 (443)
T ss_pred CccCCCCCCCCCEEEEEeeEEECCEEecceEEEe
Confidence 99874 689999999999999999999 999996
No 20
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=99.83 E-value=7e-20 Score=157.94 Aligned_cols=103 Identities=17% Similarity=0.144 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCCCCCceeeecCCCcccccCCCCCccCCC
Q 027841 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 194 (218)
Q Consensus 116 Ie~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~-l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~G 194 (218)
|+.||+|+++++++++++.+.++||+||.||++.+++.+.++|+...+ ..|.++.+++++|.|++.+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 1233344678999999999999999999999
Q ss_pred CEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 195 DTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 195 DiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
|+|++|+++.++||++ ++|||+++
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG 105 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLD 105 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECC
Confidence 9999999999999999 99999875
No 21
>PRK14576 putative endopeptidase; Provisional
Probab=99.83 E-value=5.1e-20 Score=171.02 Aligned_cols=109 Identities=18% Similarity=0.172 Sum_probs=98.2
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc
Q 027841 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (218)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~H 183 (218)
+...|+|||++||+.||+|++++++++..+.+.++||+||.||.+.++..+.+.|... +..| ++|++|.| ..+|
T Consensus 171 l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~~~h 244 (405)
T PRK14576 171 FNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGDN-FSPK 244 (405)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECCc-ccCC
Confidence 3567999999999999999999999999999999999999999999999999887542 1123 67888988 5799
Q ss_pred cCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 184 GIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 184 giP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+.|+++.+++||+|++|+++.++||++ ++|||+++
T Consensus 245 ~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G 280 (405)
T PRK14576 245 IIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLG 280 (405)
T ss_pred CCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECC
Confidence 999999999999999999999999999 99999875
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=99.82 E-value=1.6e-19 Score=150.75 Aligned_cols=98 Identities=27% Similarity=0.403 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 027841 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (218)
Q Consensus 116 Ie~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GD 195 (218)
|++||+||+++++++..+.+.++||+||.||++.+++.+.++|+++ .+|++++++|.|+..+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEG-----PSFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-----CCCCcEEEECccccccCCCCCCcCcCCCC
Confidence 6899999999999999999999999999999999999999999875 25899999999999999999999999999
Q ss_pred EEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 196 TINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 196 iV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+|++|+++.++||++ ++|||+++
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g 99 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVG 99 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECC
Confidence 999999999999999 99999985
No 23
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.81 E-value=3.3e-19 Score=168.35 Aligned_cols=107 Identities=23% Similarity=0.304 Sum_probs=94.2
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHC----CCCCCCCCCCCCCceeeecCCCcc
Q 027841 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECI 181 (218)
Q Consensus 106 ~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~----Ga~ps~l~Y~~Fp~~v~tg~N~~i 181 (218)
..+..+|++||+.||+|++|++++++.+.+.++||||+.||+..+++.+++. |+... .+||+ |+|.|++.
T Consensus 148 ~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g----~aFPt--~vS~N~~a 221 (470)
T PTZ00053 148 RELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCG----WAFPT--GCSLNHCA 221 (470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCccc----CCCCc--eeecCccc
Confidence 3455689999999999999999999999999999999999999988876554 55332 46988 56899999
Q ss_pred cccCCC---CCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 182 CHGIPD---SRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 182 ~HgiP~---~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
||+.|+ +++|++||+|.||+|+.++||++ ++|||+++
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg 262 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN 262 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC
Confidence 999995 78999999999999999999999 99999875
No 24
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.78 E-value=1.9e-18 Score=154.65 Aligned_cols=98 Identities=27% Similarity=0.395 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCC---CC
Q 027841 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 189 (218)
Q Consensus 113 ~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~---~r 189 (218)
-+||+.||+|++|++++++.+.+.++||+|+.||++.+++.+.++|+.+ +||+.+ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~------aFp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP------AFPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcce--ecCCEeeCCCCCCCcCc
Confidence 4799999999999999999999999999999999999999999999986 488854 579999999985 67
Q ss_pred ccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 190 ALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 190 ~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
.|++||+|+||+|+.++||++ ++|||+++
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG 103 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLG 103 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeC
Confidence 899999999999999999999 99999875
No 25
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=99.78 E-value=2e-18 Score=144.66 Aligned_cols=97 Identities=30% Similarity=0.427 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~-i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GD 195 (218)
|+||+|+++++++++.+.+.++||+||.||.+.+.+. +.++|... .+|+.++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56677543 35889999999999999999999999999
Q ss_pred EEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 196 TINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 196 iV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+|.+|+++.++||++ ++|||+++
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G 99 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG 99 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS
T ss_pred cceeeccceeeeeEeeeeeEEEEe
Confidence 999999999999999 99999874
No 26
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=99.77 E-value=2.4e-18 Score=148.32 Aligned_cols=97 Identities=18% Similarity=0.111 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCC---CCcc
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpG--vTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~---~r~L 191 (218)
+.||.+..+ .++++.+.+.++|| +||.||++.+++++...|.++. .+|+++||+|+|+++||+.|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 356666666 59999999999999 9999999999988887765432 258999999999999999998 9999
Q ss_pred CCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 192 EDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 192 q~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
++||+|++|+++.++||++ ++|||+++
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG 107 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLG 107 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCC
Confidence 9999999999999999999 99999875
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.76 E-value=6.4e-18 Score=145.25 Aligned_cols=103 Identities=25% Similarity=0.437 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC--CCC-CCCCCCCCceeeecCCCcccccCC----CC
Q 027841 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPS-PLGYGGFPKSVCTSVNECICHGIP----DS 188 (218)
Q Consensus 116 Ie~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga--~ps-~l~Y~~Fp~~v~tg~N~~i~HgiP----~~ 188 (218)
++.||+|++|++++++.+.+.++||+||.||+..+++++.+... ++. ..++.+++...|++.|++.||+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 36899999999999999999999999999999888888877322 221 122333332234557999999996 68
Q ss_pred CccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 189 RALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 189 r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
++|++||+|+||+|+.++||++ ++|||+++
T Consensus 81 ~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG 111 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVG 111 (228)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEeC
Confidence 8999999999999999999999 99999985
No 28
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.76 E-value=5.8e-18 Score=151.14 Aligned_cols=96 Identities=29% Similarity=0.430 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCC---CCcc
Q 027841 115 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (218)
Q Consensus 115 EIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~---~r~L 191 (218)
+|+.||+|++|++++++.+.+.++||+||.||++.+++.+.++|+.+ .||+. ++.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~------afp~~--vs~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKP------AFPCN--ISINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCcc------CCCCE--EeeCCCccCCCCCCCCCccc
Confidence 58999999999999999999999999999999999999999999876 48864 4578888999985 6899
Q ss_pred CCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 192 EDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 192 q~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
++||+|+||+|+.++||++ ++|||+++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG 100 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG 100 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC
Confidence 9999999999999999999 99999875
No 29
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=99.75 E-value=8.3e-18 Score=138.05 Aligned_cols=97 Identities=27% Similarity=0.424 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 027841 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (218)
Q Consensus 116 Ie~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GD 195 (218)
|+.||+|+++++++++.+.+.++||+||.||.+.+++.+.++|+++ .|+.++.+|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999943 4788888998889999999999999999
Q ss_pred EEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 196 TINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 196 iV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+|++|+++.++||++ ++|||+++
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g 98 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIG 98 (207)
T ss_pred EEEEEeceeECCCccceeceeEcC
Confidence 999999999999999 99999985
No 30
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.73 E-value=4e-17 Score=145.78 Aligned_cols=95 Identities=35% Similarity=0.516 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCC---CCccC
Q 027841 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (218)
Q Consensus 116 Ie~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~---~r~Lq 192 (218)
++.||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+ +||+ ++|.|++.+|+.|. ++.|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~------afp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP------AFPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC------CCCc--eeccCCEeeCCCCCCCCCcccC
Confidence 3689999999999999999999999999999999999999999876 4775 57899999999995 48999
Q ss_pred CCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 193 DGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 193 ~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
+||+|.+|+|+.++||++ ++|||+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg 99 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFD 99 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecC
Confidence 999999999999999999 99999875
No 31
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=99.69 E-value=5.2e-17 Score=148.61 Aligned_cols=112 Identities=14% Similarity=0.224 Sum_probs=103.3
Q ss_pred CCCCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccc
Q 027841 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (218)
Q Consensus 103 ~~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~ 182 (218)
.+.+.|.|||+.||+.||.|++|+++++.++++.++||+.|.++..++......+|.-.+ .+|..++|+|.|+.+.
T Consensus 178 ~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~vL 253 (492)
T KOG2737|consen 178 ILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAVL 253 (492)
T ss_pred HHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCccee
Confidence 455789999999999999999999999999999999999999999999999888887543 3688899999999999
Q ss_pred cc----CCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 183 HG----IPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 183 Hg----iP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
|+ .|+++.+|+||.+++|+|+.|++|.+ +|++|.++
T Consensus 254 HYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~n 294 (492)
T KOG2737|consen 254 HYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVN 294 (492)
T ss_pred eccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCC
Confidence 97 89999999999999999999999999 99999763
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.3e-15 Score=140.40 Aligned_cols=109 Identities=15% Similarity=0.109 Sum_probs=103.0
Q ss_pred CCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccc
Q 027841 105 VSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG 184 (218)
Q Consensus 105 ~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hg 184 (218)
..+|.|||+.|++.||+||.|+.+++-..+..-|++..|..+++.++..++.+|++. ..||+.|+.|.|+...|+
T Consensus 223 ~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~tIHY 297 (488)
T KOG2414|consen 223 ERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANTIHY 297 (488)
T ss_pred HHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccceEEE
Confidence 467999999999999999999999999999889999999999999999999999986 369999999999999999
Q ss_pred CCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 185 IPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 185 iP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
.-++..|.+||.|++|.|+.++||.+ +||||.++
T Consensus 298 ~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~s 332 (488)
T KOG2414|consen 298 VRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPIS 332 (488)
T ss_pred eecccccCCCcEEEEecCcccCceEccceeccCCC
Confidence 99999999999999999999999999 99999764
No 33
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=99.49 E-value=1.4e-13 Score=120.23 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----hcCCC--CCHHHHHHHHHHHHHHCCCCC-----CCCCCCCCCceeeecCCC-ccc
Q 027841 116 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAYP-----SPLGYGGFPKSVCTSVNE-CIC 182 (218)
Q Consensus 116 Ie~mR~Aa~ia~~al~~a~~-----~ikpG--vTe~EId~~v~~~i~~~Ga~p-----s~l~Y~~Fp~~v~tg~N~-~i~ 182 (218)
++.||+|++++..++..... .|.+| +|+.+|...+++.+.+.+... ..+. ..|+++|++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976665 89999 999999999999999887541 1111 2689999999999 899
Q ss_pred ccCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 183 HGIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 183 HgiP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
|+.++++.++.||+|.+|+|+.|+||++ ++|||+++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~ 116 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID 116 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC
Confidence 9999999999999999999999999999 99999874
No 34
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.29 E-value=1.4e-11 Score=112.35 Aligned_cols=109 Identities=25% Similarity=0.412 Sum_probs=91.5
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCC--CCCC-CCCC--CCCCceeeecCCCccc
Q 027841 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PLGY--GGFPKSVCTSVNECIC 182 (218)
Q Consensus 108 R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~G--a~ps-~l~Y--~~Fp~~v~tg~N~~i~ 182 (218)
-.|-++.-+-.+|-|++|+..+|..+.+++.||.+..||+.....++.+.- .|.. --.+ -.||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 356688889999999999999999999999999999999998888877642 2221 0111 14887 678999999
Q ss_pred ccCCC----CCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 183 HGIPD----SRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 183 HgiP~----~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
|+.|- +..|++||+|.||+|+.+|||.+ .+.|++|+
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~ 131 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVG 131 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEec
Confidence 99882 67899999999999999999999 99999985
No 35
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=98.67 E-value=1.6e-07 Score=84.61 Aligned_cols=101 Identities=26% Similarity=0.395 Sum_probs=83.3
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH----HCCCCCCCCCCCCCCceeeecCCCcccccCC
Q 027841 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (218)
Q Consensus 111 Ks~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~----~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP 186 (218)
-..+...-+|+|+++.+++-.++...|+||||..||...++...+ +.|..-. .+||+ +.|.|.|..|+.|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG----i~FPt--G~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG----IGFPT--GCSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc----ccCCC--cccccchhhhcCC
Confidence 455667789999999999999999999999999999999886543 4454432 36888 5689999999998
Q ss_pred C---CCccCCCCEEEEEEeeEeCCEEE-EEEEEEe
Q 027841 187 D---SRALEDGDTINIDVTVYLNVSIF-LHATFYH 217 (218)
Q Consensus 187 ~---~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V 217 (218)
+ ..+|+.+|+..||+|...+|-.- ++-|+.+
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F 188 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF 188 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEee
Confidence 5 46899999999999999999877 7777653
No 36
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=98.51 E-value=2e-07 Score=90.07 Aligned_cols=110 Identities=13% Similarity=0.118 Sum_probs=87.0
Q ss_pred CCCCcccCHHHHHHHHHHHHHHHHHHH----HHhhhcCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeee-cC
Q 027841 105 VSGPEVHDEKGIECMRVSGRLAAQVLE----YAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT-SV 177 (218)
Q Consensus 105 ~~~R~VKs~eEIe~mR~Aa~ia~~al~----~a~~~ikpG--vTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~t-g~ 177 (218)
..++++|+.+|++.||.|.---..|+. .....+.-| +||.+++..++++-..+..+-. .+|+++.++ |+
T Consensus 302 ~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~s~G~ 377 (606)
T KOG2413|consen 302 SRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISSSVGP 377 (606)
T ss_pred HHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeeccCCC
Confidence 345789999999999988644444443 344456667 8999999999998877665432 369999966 99
Q ss_pred CCcccccCCC---CCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 178 NECICHGIPD---SRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 178 N~~i~HgiP~---~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
|.+++|+.|. ++.+.+..+.++|.|+.|---.. +|||+..|
T Consensus 378 NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~Hfg 422 (606)
T KOG2413|consen 378 NGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFG 422 (606)
T ss_pred CceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecC
Confidence 9999999995 56899999999999999854477 99999764
No 37
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=98.26 E-value=1.6e-05 Score=66.10 Aligned_cols=95 Identities=23% Similarity=0.290 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccC----C-CCCcc
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI----P-DSRAL 191 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hgi----P-~~r~L 191 (218)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.++|..+. |+..++-|..- ..|-. + ++.+|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~------~~~~~Gh~iG~-~~~e~p~i~~~~~~~l 175 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEY------FIHRTGHGVGL-EVHEAPYISPGSDDVL 175 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCcccc------CCCCCccccCc-ccCcCCCcCCCCCCCc
Confidence 4677899999999999999999999999999999999999997542 22211111110 12221 2 46789
Q ss_pred CCCCEEEEEEeeEeCCEEE--EEEEEEeC
Q 027841 192 EDGDTINIDVTVYLNVSIF--LHATFYHT 218 (218)
Q Consensus 192 q~GDiV~IDvg~~~~GY~~--~tRTf~V~ 218 (218)
++|.++.|+.+.+..|+.+ ++-|++||
T Consensus 176 ~~gmv~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 176 EEGMVFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred CCCCEEEECCeEEecCCCEEEeeeEEEEC
Confidence 9999999999999888877 99999886
No 38
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=98.23 E-value=2.5e-05 Score=63.81 Aligned_cols=100 Identities=20% Similarity=0.222 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCE
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GDi 196 (218)
+.++++.+.+.++++.+.+.++||++..||+..+++.+.++|....... .....+.....+...-....+.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~--~~Gh~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGH--RTGHGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCC--CCccccCcccCCCCCcCCCCCCCcCCCCE
Confidence 5788999999999999999999999999999999999999987421111 11122222222211101124679999999
Q ss_pred EEEEEeeEeCC-EEE-EEEEEEeC
Q 027841 197 INIDVTVYLNV-SIF-LHATFYHT 218 (218)
Q Consensus 197 V~IDvg~~~~G-Y~~-~tRTf~V~ 218 (218)
+.++.+.+..+ +.. ++-|++|+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt 203 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVT 203 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEe
Confidence 99999999875 555 99999885
No 39
>PRK09795 aminopeptidase; Provisional
Probab=98.16 E-value=3.1e-05 Score=70.88 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCC-CCCcc
Q 027841 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRAL 191 (218)
Q Consensus 113 ~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP-~~r~L 191 (218)
+++-+.++++.+++.++.+.+.+.++||++-.||++.+++.+.+.|....+.+..| ..++...++. |.-.| ++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~G--HgiGl~~he~-p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTG--HAIGIEVHED-PRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCC--ccCCccccCC-CCcCCCCCCCc
Confidence 55556788999999999999999999999999999999999999886542211111 1222222221 21112 46889
Q ss_pred CCCCEEEEEEeeEeCCEEE--EEEEEEeC
Q 027841 192 EDGDTINIDVTVYLNVSIF--LHATFYHT 218 (218)
Q Consensus 192 q~GDiV~IDvg~~~~GY~~--~tRTf~V~ 218 (218)
++|.++.|+.+.+..|+.+ +.-|++||
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 9999999999999988877 89999886
No 40
>PRK15173 peptidase; Provisional
Probab=98.10 E-value=4.4e-05 Score=69.28 Aligned_cols=99 Identities=13% Similarity=0.089 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee--ecCCCcccccC-CCCCccCC
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGI-PDSRALED 193 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~--tg~N~~i~Hgi-P~~r~Lq~ 193 (218)
+..|++.+++.++++.+.+.++||++..||++.+.+.+.+.|......++.++ .++ .|.++. |... .++.+|++
T Consensus 202 ~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GH--GiG~~lg~~E~-P~i~~~~~~~Le~ 278 (323)
T PRK15173 202 EITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGH--GNGVFLGLEES-PFVSTHATESFTS 278 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCC--cCCCCCCcCCC-CCCCCCCCCccCC
Confidence 35678889999999999999999999999999999999998864322222222 222 233432 2222 24678999
Q ss_pred CCEEEEEEeeEeCCEEE--EEEEEEeC
Q 027841 194 GDTINIDVTVYLNVSIF--LHATFYHT 218 (218)
Q Consensus 194 GDiV~IDvg~~~~GY~~--~tRTf~V~ 218 (218)
|.++.|+.+.+..|..+ ++.|++||
T Consensus 279 GMV~tiEPgiy~~g~ggvriEDtvlVT 305 (323)
T PRK15173 279 GMVLSLETPYYGYNLGSIMIEDMILIN 305 (323)
T ss_pred CCEEEECCEEEcCCCcEEEEeeEEEEc
Confidence 99999999998767665 99999986
No 41
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=98.05 E-value=6.3e-05 Score=64.92 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccC------CCCCcc
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI------PDSRAL 191 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hgi------P~~r~L 191 (218)
..|++.+++.++++.+.+.+|||++-.||++.+.+.+.++|...... .++...+....++. +|+. -++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCcc
Confidence 47788899999999999999999999999999999999998654211 11222333333332 2221 135889
Q ss_pred CCCCEEEEEEeeEeC----CEEE--EEEEEEeC
Q 027841 192 EDGDTINIDVTVYLN----VSIF--LHATFYHT 218 (218)
Q Consensus 192 q~GDiV~IDvg~~~~----GY~~--~tRTf~V~ 218 (218)
++|.++.++.+.++. |..+ ++.|++||
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt 219 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVIN 219 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEEC
Confidence 999999999999873 6556 89999886
No 42
>PRK14576 putative endopeptidase; Provisional
Probab=98.01 E-value=7.1e-05 Score=69.90 Aligned_cols=99 Identities=13% Similarity=0.036 Sum_probs=74.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee--ecCCCcccccCC-CCCccCC
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIP-DSRALED 193 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~--tg~N~~i~HgiP-~~r~Lq~ 193 (218)
+..+++.+++.++++.+.+++|||++..||++.+.+.+.+.|......++.++ .++ .|.++. |.-.+ ++.+|++
T Consensus 284 ~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GH--giG~~l~~~e~-P~i~~~~~~~Le~ 360 (405)
T PRK14576 284 KLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGH--GDGVFLGLEEV-PFVSTQATETFCP 360 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCC--CCCCCCCcCcC-CCcCCCCCCccCC
Confidence 35678888999999999999999999999999999999999874422222222 223 333332 22222 4678999
Q ss_pred CCEEEEEEeeEeCCEEE--EEEEEEeC
Q 027841 194 GDTINIDVTVYLNVSIF--LHATFYHT 218 (218)
Q Consensus 194 GDiV~IDvg~~~~GY~~--~tRTf~V~ 218 (218)
|..+.++.+.+..|..+ ++-|++||
T Consensus 361 GMv~~vEp~~y~~g~ggvriEDtvlVT 387 (405)
T PRK14576 361 GMVLSLETPYYGIGVGSIMLEDMILIT 387 (405)
T ss_pred CCEEEECCceeecCCCEEEEeeEEEEC
Confidence 99999999888888666 99999986
No 43
>PRK14575 putative peptidase; Provisional
Probab=98.01 E-value=7.6e-05 Score=69.75 Aligned_cols=98 Identities=11% Similarity=0.074 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee--ecCCCcccccC-CCCCccCCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGI-PDSRALEDG 194 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~--tg~N~~i~Hgi-P~~r~Lq~G 194 (218)
..|++.+++.++++.+.+++|||++..||++.+.+.+.+.|....+..+ +...++ .|.++. +... -++.+|++|
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~e~-P~i~~~~~~~Le~G 362 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEES-PFVSTHATESFTSG 362 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcccCCCCCccC-CCCCCCCCCCcCCC
Confidence 4678888999999999999999999999999999999998864422222 122222 233321 1111 245789999
Q ss_pred CEEEEEEeeEeCCEEE--EEEEEEeC
Q 027841 195 DTINIDVTVYLNVSIF--LHATFYHT 218 (218)
Q Consensus 195 DiV~IDvg~~~~GY~~--~tRTf~V~ 218 (218)
.++.++.+.+..|..+ ++-|++||
T Consensus 363 Mv~tiEpgiy~~g~gGvriEDtvlVT 388 (406)
T PRK14575 363 MVLSLETPYYGYNLGSIMIEDMILIN 388 (406)
T ss_pred CEEEECCeeecCCCcEEEEEeEEEEc
Confidence 9999999999877665 99999986
No 44
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=98.01 E-value=0.00011 Score=63.02 Aligned_cols=98 Identities=22% Similarity=0.258 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc--cc-ccCC-CCCccCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--IC-HGIP-DSRALED 193 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~--i~-HgiP-~~r~Lq~ 193 (218)
.+|++.+.+.++++.+.++++||++-.||++.+++.+.+.|... ..++.++ .++....+. +. +..+ ++.+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~-~~~~~GH--giG~~~~e~p~~~~~~~~~~~~~le~ 185 (238)
T cd01086 109 EAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSV-VREFGGH--GIGRKFHEEPQIPNYGRPGTGPKLKP 185 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcce-ecCcccc--CCCCccccCCCcCCccCCCCCCEecC
Confidence 46788889999999999999999999999999999999998754 2223222 222222211 01 2223 3688999
Q ss_pred CCEEEEEEeeEe-----------------CCEEE--EEEEEEeC
Q 027841 194 GDTINIDVTVYL-----------------NVSIF--LHATFYHT 218 (218)
Q Consensus 194 GDiV~IDvg~~~-----------------~GY~~--~tRTf~V~ 218 (218)
|.++.++.+.++ .|-.+ ++.|++||
T Consensus 186 Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vt 229 (238)
T cd01086 186 GMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLIT 229 (238)
T ss_pred CCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEc
Confidence 999999999875 33334 88899886
No 45
>PRK05716 methionine aminopeptidase; Validated
Probab=97.97 E-value=0.0001 Score=63.63 Aligned_cols=98 Identities=20% Similarity=0.203 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc--cccc-CC-CCCccCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~--i~Hg-iP-~~r~Lq~ 193 (218)
..|++.+.+.++++.+.+.++||++-.||++++++.+.++|... ..++.++ .++...++. +.++ .+ ++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~-~~~~~GH--giG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV-VREYCGH--GIGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee-ecCcccc--ccCCccCCCCccCcCCCCCCCCEecC
Confidence 46778888999999999999999999999999999999998764 2223222 222222221 1111 12 4678999
Q ss_pred CCEEEEEEeeEe-----------------CC-EEE-EEEEEEeC
Q 027841 194 GDTINIDVTVYL-----------------NV-SIF-LHATFYHT 218 (218)
Q Consensus 194 GDiV~IDvg~~~-----------------~G-Y~~-~tRTf~V~ 218 (218)
|+++.|+.+.+. +| +.. ++-|++||
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt 239 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVT 239 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEc
Confidence 999999998875 23 445 88999886
No 46
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.92 E-value=0.0002 Score=61.82 Aligned_cols=98 Identities=19% Similarity=0.086 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc--ccccC--CCCCccCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI--PDSRALED 193 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~--i~Hgi--P~~r~Lq~ 193 (218)
.+|++.+.+.++++.+.+.++||++..||++.+.+.+.+.|.... .+|.++ .++...++. ++.+. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 467788888999999999999999999999999999999987542 223222 233333332 12111 13678999
Q ss_pred CCEEEEEEeeEe-----------------CC-EEE-EEEEEEeC
Q 027841 194 GDTINIDVTVYL-----------------NV-SIF-LHATFYHT 218 (218)
Q Consensus 194 GDiV~IDvg~~~-----------------~G-Y~~-~tRTf~V~ 218 (218)
|+++.|+.+.+. +| +.. ++-|++||
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt 237 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVIT 237 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEc
Confidence 999999998876 23 444 88899886
No 47
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=97.86 E-value=3e-05 Score=76.95 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=79.7
Q ss_pred CCCCCcccCHHHHHHHHHHHHHHHHHHHHHh-----hhcCCC--CCHHHHHHHHHHHHHHC----CCCCCCCCCCCCCce
Q 027841 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAG-----TLVKPG--ITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKS 172 (218)
Q Consensus 104 ~~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~-----~~ikpG--vTe~EId~~v~~~i~~~----Ga~ps~l~Y~~Fp~~ 172 (218)
+..+.+||++.||+.||+|++++..++.... .+|..| ||-.-+...++.++-+. |..|..+. +.||++
T Consensus 131 ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d-~cY~PI 209 (960)
T KOG1189|consen 131 LSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLD-MCYPPI 209 (960)
T ss_pred hhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccc-cccChh
Confidence 3467899999999999999999999988433 344444 45555666666666553 34442222 258888
Q ss_pred eeecCCC-cccccCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEe
Q 027841 173 VCTSVNE-CICHGIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYH 217 (218)
Q Consensus 173 v~tg~N~-~i~HgiP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V 217 (218)
+.+|.+- .-+....++..| | +|..-+|+.|++|++ ++|||++
T Consensus 210 iqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li 253 (960)
T KOG1189|consen 210 IQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI 253 (960)
T ss_pred hhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee
Confidence 8887763 334455677788 4 999999999999999 9999987
No 48
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=97.81 E-value=0.00025 Score=65.90 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=74.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccc-----
Q 027841 110 VHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG----- 184 (218)
Q Consensus 110 VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hg----- 184 (218)
+.++. +.++++.+++.++++.+.++++||+|..||++.+.+.+.+.|... .+..|+ .++.+... .+|.
T Consensus 265 vG~p~--~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~--~h~~Gh--giGl~~~~-~~~e~~~~l 337 (391)
T TIGR02993 265 LGKPT--QAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHK--DSRTGY--PIGLSYPP-DWGERTMSL 337 (391)
T ss_pred cCCCC--HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcc--CCCcee--eeccCcCC-CCCCccccc
Confidence 44444 357788899999999999999999999999999999999988653 111222 22222110 1111
Q ss_pred CC-CCCccCCCCEEEEEEeeEeCCEEE-EEEEEEeC
Q 027841 185 IP-DSRALEDGDTINIDVTVYLNVSIF-LHATFYHT 218 (218)
Q Consensus 185 iP-~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V~ 218 (218)
.| ++.+|++|.++.++.+.+..|+.. ++-|++||
T Consensus 338 ~~~~~~~L~~GMv~tvEpgiy~~~~Gvried~v~VT 373 (391)
T TIGR02993 338 RPGDNTVLKPGMTFHFMTGLWMEDWGLEITESILIT 373 (391)
T ss_pred cCCCCceecCCCEEEEcceeEeCCCCeEEeeEEEEC
Confidence 12 357899999999999999988755 99999886
No 49
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=97.80 E-value=0.00016 Score=60.35 Aligned_cols=97 Identities=25% Similarity=0.288 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCceeeecCCCcccccC-C-CCCccCCCC
Q 027841 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY-PSPLGYGGFPKSVCTSVNECICHGI-P-DSRALEDGD 195 (218)
Q Consensus 119 mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~-ps~l~Y~~Fp~~v~tg~N~~i~Hgi-P-~~r~Lq~GD 195 (218)
.+++.+.+.++++.+.+.++||+|..||.+.+++.+.++|.. +.+ ..+...+.....+..|.-. + ++.+|++|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~---~~~GH~iG~~~~~~~P~i~~~~~~~~l~~gm 180 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYP---HGLGHGIGLEFHEPGPNIARPGDDTVLEPGM 180 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBT---SSSEEEESSSSSEEEEEESSTTTSSB--TTB
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceee---ecccccccccccccceeeecccccceecCCC
Confidence 888888999999999999999999999999999999999862 211 0122222221121112211 2 578999999
Q ss_pred EEEEEEeeE-eCCEEE--EEEEEEeC
Q 027841 196 TINIDVTVY-LNVSIF--LHATFYHT 218 (218)
Q Consensus 196 iV~IDvg~~-~~GY~~--~tRTf~V~ 218 (218)
++.++.+.. ..|+.+ ++-|++||
T Consensus 181 v~~iep~~~~~~~~~g~~~ed~v~Vt 206 (207)
T PF00557_consen 181 VFAIEPGLYFIPGWGGVRFEDTVLVT 206 (207)
T ss_dssp EEEEEEEEEEETTSEEEEEBEEEEEE
T ss_pred ceeEeeeEEccCCCcEEEEEEEEEEC
Confidence 999999888 667655 99999886
No 50
>PRK12897 methionine aminopeptidase; Reviewed
Probab=97.76 E-value=0.00028 Score=61.38 Aligned_cols=98 Identities=17% Similarity=0.147 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc--ccccC-C-CCCccCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI-P-DSRALED 193 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~--i~Hgi-P-~~r~Lq~ 193 (218)
..|++.+++.++++.+.+.++||++..|+++.+.+.+.+.|.... .++.++ .+..+.++. +.+.. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCC
Confidence 466777899999999999999999999999999999999886532 222222 223333332 12211 2 3468999
Q ss_pred CCEEEEEEeeE-----------------eCCEEE--EEEEEEeC
Q 027841 194 GDTINIDVTVY-----------------LNVSIF--LHATFYHT 218 (218)
Q Consensus 194 GDiV~IDvg~~-----------------~~GY~~--~tRTf~V~ 218 (218)
|.++.+..+.+ .+|..+ ++.|++||
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt 238 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAIT 238 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEe
Confidence 99999999988 356455 99999885
No 51
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=97.75 E-value=0.00036 Score=60.09 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC----CCC----------CCCC--CCCCceeeecCCCcc
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA----YPS----------PLGY--GGFPKSVCTSVNECI 181 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga----~ps----------~l~Y--~~Fp~~v~tg~N~~i 181 (218)
..++..+.+.++++.+.+.++||++-.||++.+.+.+.+++. .+. ...| +++...+.....+.
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~- 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDV- 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccC-
Confidence 566788889999999999999999999999999998876532 110 0011 11222233333332
Q ss_pred ccc--CC-CCCccCCCCEEEEEEeeEeCC----------EEE--EEEEEEeC
Q 027841 182 CHG--IP-DSRALEDGDTINIDVTVYLNV----------SIF--LHATFYHT 218 (218)
Q Consensus 182 ~Hg--iP-~~r~Lq~GDiV~IDvg~~~~G----------Y~~--~tRTf~V~ 218 (218)
++. .+ ++.+|++|..+.+..+.+..| ..+ ++-|++||
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt 234 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVT 234 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEc
Confidence 221 23 467899999999999999865 445 89999886
No 52
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=97.72 E-value=0.00037 Score=61.00 Aligned_cols=100 Identities=15% Similarity=0.115 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC--CCCCCCCCCCCceeeecCCCcccccCC-CCCccCC
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPSPLGYGGFPKSVCTSVNECICHGIP-DSRALED 193 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga--~ps~l~Y~~Fp~~v~tg~N~~i~HgiP-~~r~Lq~ 193 (218)
+.+|++.+++.++.+.+.+.++||++-.||++.+.+.+.+.|. ..... .+....++...++....-.| ++++|++
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~--~~~GHgiGle~hE~~~~l~~~~~~~L~~ 196 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFT--KNLGFGIGLEFRESSLIINAKNDRKLKK 196 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCc--CCcccccCcccccCccccCCCCCCCcCC
Confidence 3577889999999999999999999999999999999988752 11100 11122233333332111112 4678999
Q ss_pred CCEEEEEEeeE-eC----------CEEE-EEEEEEeC
Q 027841 194 GDTINIDVTVY-LN----------VSIF-LHATFYHT 218 (218)
Q Consensus 194 GDiV~IDvg~~-~~----------GY~~-~tRTf~V~ 218 (218)
|.++.|..|.+ +. .|.- ++-|++||
T Consensus 197 GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt 233 (243)
T cd01091 197 GMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVT 233 (243)
T ss_pred CCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEc
Confidence 99999999997 42 3444 99999886
No 53
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=97.69 E-value=0.00045 Score=59.34 Aligned_cols=96 Identities=20% Similarity=0.187 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC--CCCceeeecCCCcccccCCCCCccCCC
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGIPDSRALEDG 194 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~--~Fp~~v~tg~N~~i~HgiP~~r~Lq~G 194 (218)
...+++.+.+.++++.+.+.++||++-.||++.+.+.+.+.|+.+. -+|. .+...+.++.+... -..+|++|
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~-~~~~~h~~g~~~~~~~~~~~-----~~~~l~~g 193 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPV-EGVLSHQLKRVVSSGEGKAK-----LVECVKHG 193 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEe-cCccccCcCceEecCCCCcc-----chhhccCC
Confidence 4678888999999999999999999999999999999999994221 0111 11222333322110 14679999
Q ss_pred CEEEEEEeeEeCCEEE--EEEEEEeC
Q 027841 195 DTINIDVTVYLNVSIF--LHATFYHT 218 (218)
Q Consensus 195 DiV~IDvg~~~~GY~~--~tRTf~V~ 218 (218)
.++.++...+..|..+ ++-||+||
T Consensus 194 mvf~~ep~~~~~g~~~~~~~~Tv~vt 219 (228)
T cd01089 194 LLFPYPVLYEKEGEVVAQFKLTVLLT 219 (228)
T ss_pred cccccceeEccCCCeEEEEEEEEEEc
Confidence 9999999999988665 99999986
No 54
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.68 E-value=0.00056 Score=59.18 Aligned_cols=98 Identities=23% Similarity=0.195 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc---cccc-CC-CCCccC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC---ICHG-IP-DSRALE 192 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~---i~Hg-iP-~~r~Lq 192 (218)
..+++...+.++++.+.+.++||++..||++.+.+.+.++|... ..++.++ .+.....+. +.++ .| ++.+|+
T Consensus 124 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~-~~~~~GH--giG~~~he~p~~~~~~~~~~~~~~le 200 (255)
T PRK12896 124 EAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSV-VRDLTGH--GVGRSLHEEPSVILTYTDPLPNRLLR 200 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEe-ccCcccC--CcCcccccCCCccccCCCCCCCCEec
Confidence 35677888889999999999999999999999999999988643 1222222 222222221 1111 13 367899
Q ss_pred CCCEEEEEEeeEe-----------------CC-EEE-EEEEEEeC
Q 027841 193 DGDTINIDVTVYL-----------------NV-SIF-LHATFYHT 218 (218)
Q Consensus 193 ~GDiV~IDvg~~~-----------------~G-Y~~-~tRTf~V~ 218 (218)
+|.++.|+.+.+. +| +.. ++-|++||
T Consensus 201 ~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt 245 (255)
T PRK12896 201 PGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVT 245 (255)
T ss_pred CCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEc
Confidence 9999999988762 33 444 99999886
No 55
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=97.67 E-value=0.00047 Score=63.57 Aligned_cols=102 Identities=22% Similarity=0.217 Sum_probs=75.0
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCC-CcccccCC-
Q 027841 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN-ECICHGIP- 186 (218)
Q Consensus 109 ~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N-~~i~HgiP- 186 (218)
.+..+.+ ..|+...++.++++++.++++||++-.|||+.+.+.+.+.|.... |....+-|+. ....|-.|
T Consensus 256 ~~G~~~~--~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~------~~h~~GHgvG~~l~vhE~p~ 327 (384)
T COG0006 256 PIGKPSD--EQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLY------FLHGTGHGVGFVLDVHEHPQ 327 (384)
T ss_pred ecCCCCH--HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccc------ccCCccccCCCCcccCcCcc
Confidence 4453333 456888999999999999999999999999999999999765432 2222222222 11233333
Q ss_pred -----CCCccCCCCEEEEEEeeEeCCEEE--EEEEEEeC
Q 027841 187 -----DSRALEDGDTINIDVTVYLNVSIF--LHATFYHT 218 (218)
Q Consensus 187 -----~~r~Lq~GDiV~IDvg~~~~GY~~--~tRTf~V~ 218 (218)
.+.+|++|.++.++.|.++.|-+| +..+++||
T Consensus 328 ~~~~~~~~~L~~GMv~t~Epg~y~~g~~GirIEd~vlVt 366 (384)
T COG0006 328 YLSPGSDTTLEPGMVFSIEPGIYIPGGGGVRIEDTVLVT 366 (384)
T ss_pred ccCCCCCccccCCcEEEeccccccCCCceEEEEEEEEEc
Confidence 467899999999999999877666 99999986
No 56
>PRK12318 methionine aminopeptidase; Provisional
Probab=97.59 E-value=0.00096 Score=59.90 Aligned_cols=86 Identities=19% Similarity=0.198 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc--ccccCC-CCCccCCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGIP-DSRALEDG 194 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~--i~HgiP-~~r~Lq~G 194 (218)
.+|++..++.++++.+.+.++||++..||++.+.+.+.++|.... ..+.++ .++...++. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GH--gIGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGH--GVGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccC--CcCccccCCCcccCcCCCCCCEeCCC
Confidence 567889999999999999999999999999999999999886531 122222 233333332 112112 34689999
Q ss_pred CEEEEEEeeEeC
Q 027841 195 DTINIDVTVYLN 206 (218)
Q Consensus 195 DiV~IDvg~~~~ 206 (218)
.++.|+.+.+..
T Consensus 236 MV~~iEP~i~~~ 247 (291)
T PRK12318 236 MIFTIEPMINVG 247 (291)
T ss_pred CEEEECCEEEcC
Confidence 999999888764
No 57
>PRK07281 methionine aminopeptidase; Reviewed
Probab=97.55 E-value=0.00088 Score=60.17 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCc--cccc-CC-CCCccCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~--i~Hg-iP-~~r~Lq~ 193 (218)
..|++.+++.++++.+.+.++||++..||++.+++.+.++|... ..++.++ .++...++. +++. .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH--GIGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH--GVGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee--eCCCccCCCCcCCCcccCCCCCEECC
Confidence 46789999999999999999999999999999999998887643 2222222 222222221 1221 12 3568999
Q ss_pred CCEEEEEEeeEe
Q 027841 194 GDTINIDVTVYL 205 (218)
Q Consensus 194 GDiV~IDvg~~~ 205 (218)
|.++.|..+.+.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999999975
No 58
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.51 E-value=0.0012 Score=62.01 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--cccccCCC--CCccCCC
Q 027841 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIPD--SRALEDG 194 (218)
Q Consensus 119 mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~--~i~HgiP~--~r~Lq~G 194 (218)
.|++.+.+.++++.+.++++||++-.||.+++++.+.++|... ..+|.|+ .|+...++ .++|+..+ ..+|++|
T Consensus 252 ~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~-v~~~~GH--GIG~~~He~P~i~~~~~~~~~~~l~~G 328 (396)
T PLN03158 252 SRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSV-VKSYCGH--GIGELFHCAPNIPHYARNKAVGVMKAG 328 (396)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCc-cCCccCC--ccccccCCCCCCCcccCCCCCCEecCC
Confidence 5778889999999999999999999999999999999988653 1223222 22222222 23453222 3689999
Q ss_pred CEEEEEEeeEe-----------------CCEE-E-EEEEEEeC
Q 027841 195 DTINIDVTVYL-----------------NVSI-F-LHATFYHT 218 (218)
Q Consensus 195 DiV~IDvg~~~-----------------~GY~-~-~tRTf~V~ 218 (218)
.++.|+-+.+. +|.. + ++.|++||
T Consensus 329 MVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVT 371 (396)
T PLN03158 329 QVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVT 371 (396)
T ss_pred cEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEe
Confidence 99999988764 3333 4 88888876
No 59
>PRK08671 methionine aminopeptidase; Provisional
Probab=97.12 E-value=0.0046 Score=55.39 Aligned_cols=86 Identities=21% Similarity=0.214 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccC--------CCCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI--------PDSR 189 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hgi--------P~~r 189 (218)
..+++.+.+.++++.+.+.++||++..||++.+++.+.+.|..+. .+..++ .+|.+ ..|.- .++.
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GH----giG~~--~~he~p~ip~~~~~~~~ 174 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGH----GLERY--ELHAGPSIPNYDEGGGV 174 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCccc----CcCCC--cccCCCccCccCCCCCc
Confidence 456788888899999999999999999999999999999997662 222222 12221 23322 1367
Q ss_pred ccCCCCEEEEEEeeEe-CCEEE
Q 027841 190 ALEDGDTINIDVTVYL-NVSIF 210 (218)
Q Consensus 190 ~Lq~GDiV~IDvg~~~-~GY~~ 210 (218)
+|++|+++.||..+.- .|+..
T Consensus 175 ~le~GmV~aIEp~~t~G~G~v~ 196 (291)
T PRK08671 175 KLEEGDVYAIEPFATDGEGKVV 196 (291)
T ss_pred eeCCCCEEEEcceEECCCCeEe
Confidence 8999999999987653 45544
No 60
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.06 E-value=0.0042 Score=55.67 Aligned_cols=86 Identities=20% Similarity=0.163 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccC--------CCCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI--------PDSR 189 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hgi--------P~~r 189 (218)
..++..+.+.++++.+.+.++||++..||++.+++.+.+.|..+. .++.++ ..|. ...|+. .++.
T Consensus 101 ~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~-~~~~GH----gig~--~~~h~~~~ip~~~~~~~~ 173 (291)
T cd01088 101 KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPI-RNLTGH----SIER--YRLHAGKSIPNVKGGEGT 173 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEe-ecCCcc----CccC--ccccCCCccCccCCCCCC
Confidence 456778889999999999999999999999999999999998662 222222 1222 123331 1357
Q ss_pred ccCCCCEEEEEEeeEe-CCEEE
Q 027841 190 ALEDGDTINIDVTVYL-NVSIF 210 (218)
Q Consensus 190 ~Lq~GDiV~IDvg~~~-~GY~~ 210 (218)
+|++|+++.||..+.- .|+..
T Consensus 174 ~le~gmV~aIEp~~s~G~G~v~ 195 (291)
T cd01088 174 RLEEGDVYAIEPFATTGKGYVH 195 (291)
T ss_pred EeCCCCEEEEceeEECCCCeee
Confidence 8999999999997653 45544
No 61
>PRK10879 proline aminopeptidase P II; Provisional
Probab=97.01 E-value=0.0096 Score=56.35 Aligned_cols=100 Identities=18% Similarity=0.199 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH----HCCCCCCC-------CCCC-CCCceee----ecCCCcc
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSP-------LGYG-GFPKSVC----TSVNECI 181 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~----~~Ga~ps~-------l~Y~-~Fp~~v~----tg~N~~i 181 (218)
..|++.+++.++++.+.+.++||++-.||+..+.+.+. +.|.-+.. .+|. .|+..++ ..++++
T Consensus 283 ~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~- 361 (438)
T PRK10879 283 AQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDV- 361 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcC-
Confidence 35677888899999999999999999999998876554 33432100 0011 1333332 222221
Q ss_pred cccCC-CCCccCCCCEEEEEEeeEeC----------CEEE-EEEEEEeC
Q 027841 182 CHGIP-DSRALEDGDTINIDVTVYLN----------VSIF-LHATFYHT 218 (218)
Q Consensus 182 ~HgiP-~~r~Lq~GDiV~IDvg~~~~----------GY~~-~tRTf~V~ 218 (218)
++..+ ++++|++|.++.|+.|.+.. |+.. ++-|++||
T Consensus 362 ~~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 362 GVYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred CCcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 11112 36799999999999999864 4544 89999886
No 62
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=96.94 E-value=0.018 Score=49.66 Aligned_cols=96 Identities=15% Similarity=0.043 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee--ecCCCcccc--cCCCCCccCC
Q 027841 119 MRVSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICH--GIPDSRALED 193 (218)
Q Consensus 119 mR~Aa~ia~~al~~a~~~i-kpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~--tg~N~~i~H--giP~~r~Lq~ 193 (218)
.|++..++.++...+.+.+ +||++-.+|++.+++.+.+.|.+- ....++ .|. ...++.... ...++.+|++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~--~h~~GH--gIG~~l~~hE~P~i~~~~~~~~~L~~ 188 (224)
T cd01085 113 QKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDY--GHGTGH--GVGSFLNVHEGPQSISPAPNNVPLKA 188 (224)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCC--CCCCCC--CCCCCCcCCCCCCcCCcCCCCCCcCC
Confidence 4445555566666666666 599999999999999998887531 011111 222 122332111 1124578999
Q ss_pred CCEEEEEEeeEeCCEEE--EEEEEEeC
Q 027841 194 GDTINIDVTVYLNVSIF--LHATFYHT 218 (218)
Q Consensus 194 GDiV~IDvg~~~~GY~~--~tRTf~V~ 218 (218)
|.++.|+.+.+..|-.+ ++.|++||
T Consensus 189 GmvftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 189 GMILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred CCEEEECCEeEeCCCeEEEeeEEEEEe
Confidence 99999999999876555 99999885
No 63
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.83 E-value=0.0074 Score=54.25 Aligned_cols=85 Identities=26% Similarity=0.321 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccc---CC-----CCCc
Q 027841 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG---IP-----DSRA 190 (218)
Q Consensus 119 mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hg---iP-----~~r~ 190 (218)
.++..+.+.++++.+.+.++||++..||++.+++.+.+.|..+. .++.++. .|. ...|+ +| ++.+
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i-~~~~GHg----ig~--~~~h~g~~ip~i~~~~~~~ 178 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI-SNLTGHS----MAP--YRLHGGKSIPNVKERDTTK 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCCCCcc----eec--ccccCCCccCeecCCCCCE
Confidence 47788888899999999999999999999999999999998762 3333332 111 12332 12 3568
Q ss_pred cCCCCEEEEEEeeEe-CCEEE
Q 027841 191 LEDGDTINIDVTVYL-NVSIF 210 (218)
Q Consensus 191 Lq~GDiV~IDvg~~~-~GY~~ 210 (218)
|++|+.+.||..+.. .|+..
T Consensus 179 le~GmV~aIEP~~~~G~G~v~ 199 (295)
T TIGR00501 179 LEEGDVVAIEPFATDGVGYVT 199 (295)
T ss_pred eCCCCEEEEceeEECCcCeEe
Confidence 999999999986653 45544
No 64
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.54 E-value=0.052 Score=48.31 Aligned_cols=85 Identities=16% Similarity=0.131 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC----CCccccc-CCC-CCc
Q 027841 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV----NECICHG-IPD-SRA 190 (218)
Q Consensus 117 e~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~----N~~i~Hg-iP~-~r~ 190 (218)
+..++.++.+.++|..+.+.++||++..||-+.+++.+..+|..+- .+|.|+. .|. .-.++|+ .+. ..+
T Consensus 120 ~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~vV-r~~~GHg----ig~~~He~p~ip~y~~~~~~~~ 194 (255)
T COG0024 120 EDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVV-RNLTGHG----IGRELHEEPSIPNYGKDGTGVR 194 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCEEe-ecccCCc----cCcccCCCCeeccccCCCCCcc
Confidence 4566788899999999999999999999999999999998886652 3444431 221 1124452 222 258
Q ss_pred cCCCCEEEEEEeeEeC
Q 027841 191 LEDGDTINIDVTVYLN 206 (218)
Q Consensus 191 Lq~GDiV~IDvg~~~~ 206 (218)
|++|+++.|+--+...
T Consensus 195 l~~Gmv~aIEPmi~~G 210 (255)
T COG0024 195 LKEGMVFAIEPMINTG 210 (255)
T ss_pred cCCCCEEEEeeEEEcC
Confidence 9999999998766543
No 65
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.42 E-value=0.02 Score=53.64 Aligned_cols=91 Identities=21% Similarity=0.204 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CceeeecCCCcccccCC------CCC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGF--PKSVCTSVNECICHGIP------DSR 189 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~F--p~~v~tg~N~~i~HgiP------~~r 189 (218)
..+++...+.++++.+.+.++||++-.||++.+++.+.++|+.+. -|+.++ ...+--|.-..+++..+ ++.
T Consensus 139 ~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~G~~~v-~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~ 217 (389)
T TIGR00495 139 RKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGCTPV-EGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTA 217 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeec-CCceeecccceeccCCCeeeecCCccccCCCCCC
Confidence 466677788899999999999999999999999999999998663 222221 11111111112233221 235
Q ss_pred ccCCCCEEEEEEeeEe-CCEE
Q 027841 190 ALEDGDTINIDVTVYL-NVSI 209 (218)
Q Consensus 190 ~Lq~GDiV~IDvg~~~-~GY~ 209 (218)
.+++|+++.||+.+.. .|+.
T Consensus 218 ~le~gev~aIEp~vs~G~g~v 238 (389)
T TIGR00495 218 EFEENEVYAVDILVSTGEGKA 238 (389)
T ss_pred EecCCCEEEEeeeecCCCceE
Confidence 7999999999999885 4443
No 66
>PRK13607 proline dipeptidase; Provisional
Probab=96.32 E-value=0.039 Score=52.49 Aligned_cols=89 Identities=18% Similarity=0.181 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHH----HHCCCCCC-------CCCCC--CCCce----eeecCCCcc
Q 027841 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS-------PLGYG--GFPKS----VCTSVNECI 181 (218)
Q Consensus 119 mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i----~~~Ga~ps-------~l~Y~--~Fp~~----v~tg~N~~i 181 (218)
.++..+++.++++.+.+.++||++-.||+..+++.+ .+.|.... ..++. .|+.. ++..++++-
T Consensus 270 ~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~ 349 (443)
T PRK13607 270 FAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVA 349 (443)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCC
Confidence 347788999999999999999999999999887655 44554321 00110 13333 233333321
Q ss_pred cc----------------cCCCCCccCCCCEEEEEEeeEeCC
Q 027841 182 CH----------------GIPDSRALEDGDTINIDVTVYLNV 207 (218)
Q Consensus 182 ~H----------------giP~~r~Lq~GDiV~IDvg~~~~G 207 (218)
-+ ..-.+++|++|.++.|+-|+|+.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 350 GFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred CcccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 00 011357999999999999999863
No 67
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=96.31 E-value=0.036 Score=53.31 Aligned_cols=93 Identities=12% Similarity=0.113 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCceeeecCCCccccc---CC-----C
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY--PSPLGYGGFPKSVCTSVNECICHG---IP-----D 187 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~--ps~l~Y~~Fp~~v~tg~N~~i~Hg---iP-----~ 187 (218)
..++..+++.+|++.+.+.++||++..||++++++.+.+.|.. .-...+..+....+-|..-...|+ +| +
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~ 343 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGE 343 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCC
Confidence 4667888899999999999999999999999999999999863 000000011222223333223454 44 3
Q ss_pred CCccCCCCEEEEEEeeEe-CCEEE
Q 027841 188 SRALEDGDTINIDVTVYL-NVSIF 210 (218)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~-~GY~~ 210 (218)
..+|++|+++.|+..+.- .||..
T Consensus 344 ~~~LeeGmVfaIEPf~stG~G~v~ 367 (470)
T PTZ00053 344 NTRMEEGELFAIETFASTGRGYVN 367 (470)
T ss_pred CCEecCCCEEEEcceeeCCCCeEe
Confidence 568999999999998874 55544
No 68
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=96.27 E-value=0.0058 Score=60.36 Aligned_cols=112 Identities=13% Similarity=0.107 Sum_probs=67.0
Q ss_pred CCCCcccCHHHHHHHHHHHHHHHHHHHHHhhhc----CCC--CCHHHHHHHHHHHHHHC------CCCCCCCCC----CC
Q 027841 105 VSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLV----KPG--ITTDEIDKAVHQMIIDN------GAYPSPLGY----GG 168 (218)
Q Consensus 105 ~~~R~VKs~eEIe~mR~Aa~ia~~al~~a~~~i----kpG--vTe~EId~~v~~~i~~~------Ga~ps~l~Y----~~ 168 (218)
..+-.+|+++||+.+|.+.+.....|+...+.+ ..+ +|-.-+...++..+-+- -..-+-+++ ..
T Consensus 165 sk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~~~d~lew~ 244 (1001)
T COG5406 165 SKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDIDLDQLEWC 244 (1001)
T ss_pred hHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccccchhhhhhh
Confidence 456789999999999999999998887544321 111 23333333333322111 000000110 02
Q ss_pred CCceeeecCC-CcccccCCCCCccCCCCEEEEEEeeEeCCEEE-EEEEEEe
Q 027841 169 FPKSVCTSVN-ECICHGIPDSRALEDGDTINIDVTVYLNVSIF-LHATFYH 217 (218)
Q Consensus 169 Fp~~v~tg~N-~~i~HgiP~~r~Lq~GDiV~IDvg~~~~GY~~-~tRTf~V 217 (218)
|.+++.+|.. ..-+..+..++.|. ||.|.+-+|..|+||++ ++|||+.
T Consensus 245 ytpiiqsg~~~Dl~psa~s~~~~l~-gd~vl~s~GiRYn~YCSn~~RT~l~ 294 (1001)
T COG5406 245 YTPIIQSGGSIDLTPSAFSFPMELT-GDVVLLSIGIRYNGYCSNMSRTILT 294 (1001)
T ss_pred cchhhccCceeecccccccCchhhc-CceEEEEeeeeeccccccccceEEe
Confidence 5566665543 22233333455553 78999999999999999 9999986
No 69
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=93.36 E-value=1 Score=41.28 Aligned_cols=87 Identities=24% Similarity=0.317 Sum_probs=59.6
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC--CCceeeecCCCcccccCC
Q 027841 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGG--FPKSVCTSVNECICHGIP 186 (218)
Q Consensus 109 ~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~--Fp~~v~tg~N~~i~HgiP 186 (218)
.+-+-+ +..|+-.+.+.++|+.+.+.+|||++=.||-..+++...++|..- ...|.| ....+-+.+| ++|+.-
T Consensus 223 fvG~Vd--e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sV-Vr~ycGHGig~~FH~~Pn--ipHya~ 297 (369)
T KOG2738|consen 223 FVGNVD--EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSV-VRSYCGHGIGRVFHCAPN--IPHYAK 297 (369)
T ss_pred EeeccC--HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCcee-ehhhhccccccccccCCC--chhhcc
Confidence 344433 378888999999999999999999999999999999998887532 112322 1222223333 577654
Q ss_pred C--CCccCCCCEEEEE
Q 027841 187 D--SRALEDGDTINID 200 (218)
Q Consensus 187 ~--~r~Lq~GDiV~ID 200 (218)
+ -....+|....|+
T Consensus 298 n~a~GvM~~G~tFTIE 313 (369)
T KOG2738|consen 298 NKAPGVMKPGQTFTIE 313 (369)
T ss_pred cCCcceeecCceEEee
Confidence 3 2356778777765
No 70
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=81.44 E-value=6.1 Score=40.47 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC-----cccccCCCCCccC
Q 027841 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-----CICHGIPDSRALE 192 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~-----~i~HgiP~~r~Lq 192 (218)
.|.++...--.+.+++..+++||..-.+|...+..++.+.+-+-. ..|.+.+++|..- ...-+.-++++|+
T Consensus 258 emq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~----~~~~k~lG~~iGlEFREssl~inaKnd~~lk 333 (960)
T KOG1189|consen 258 EMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELV----PNFTKNLGFGIGLEFRESSLVINAKNDRVLK 333 (960)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchh----hhhhhhcccccceeeecccccccccchhhhc
Confidence 467788888888899999999999999999999999998874321 1344444433221 1111223579999
Q ss_pred CCCEEEEEEeeEe-------CCEEE-EEEEEEeC
Q 027841 193 DGDTINIDVTVYL-------NVSIF-LHATFYHT 218 (218)
Q Consensus 193 ~GDiV~IDvg~~~-------~GY~~-~tRTf~V~ 218 (218)
+|++.+|-+|..- +-|.- ++-|+.|+
T Consensus 334 ~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~ 367 (960)
T KOG1189|consen 334 KGMVFNISLGFSNLTNPESKNSYALLLSDTVLVG 367 (960)
T ss_pred cCcEEEEeeccccccCcccccchhhhccceeeec
Confidence 9999999988751 23544 77777764
No 71
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=76.05 E-value=11 Score=27.27 Aligned_cols=52 Identities=17% Similarity=0.323 Sum_probs=33.0
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC-cccccCCCCCccCCCCEEEE
Q 027841 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 199 (218)
Q Consensus 137 ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~-~i~HgiP~~r~Lq~GDiV~I 199 (218)
++.|-|-.|++..+|..+.++ |....-.|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~-----------f~~A~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQ-----------FKYALVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHh-----------CCeeEEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 567999999999999777653 21111112221 11223456889999999986
No 72
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=74.82 E-value=11 Score=38.05 Aligned_cols=81 Identities=21% Similarity=0.274 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC--C---CcccccCCCCCccCC
Q 027841 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV--N---ECICHGIPDSRALED 193 (218)
Q Consensus 119 mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~--N---~~i~HgiP~~r~Lq~ 193 (218)
|.+-....-...+.+...++||.+-.+|...+..++...|-+-.| .|-.-++.+. . ...+-..-++|+||.
T Consensus 300 ~~~Ny~fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~r~lq~ 375 (1001)
T COG5406 300 QQKNYEFLYMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNGRVLQA 375 (1001)
T ss_pred hhhhHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCCceecc
Confidence 334445555566777789999999999999999999998865322 2433333222 1 112222335799999
Q ss_pred CCEEEEEEee
Q 027841 194 GDTINIDVTV 203 (218)
Q Consensus 194 GDiV~IDvg~ 203 (218)
|++.+|.+|.
T Consensus 376 g~~fnis~gf 385 (1001)
T COG5406 376 GCIFNISLGF 385 (1001)
T ss_pred ccEEEEeecc
Confidence 9999998865
No 73
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=60.18 E-value=42 Score=33.51 Aligned_cols=85 Identities=14% Similarity=0.074 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcC-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccc-----cC-----C
Q 027841 118 CMRVSGRLAAQVLEYAGTLVK-PGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH-----GI-----P 186 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~~ik-pGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~H-----gi-----P 186 (218)
..|++.-.+-+++-...+++- .|..-..+|.+.+.++-+.|.+- ....+-|+....|| ++ +
T Consensus 427 eek~~yT~VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~gLDy--------~HgTGHGVG~fLnVhE~P~~is~r~~~ 498 (606)
T KOG2413|consen 427 EEKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGLDY--------GHGTGHGVGSFLNVHEGPIGIGYRPYS 498 (606)
T ss_pred HHHHHHHHHHHhhhHhhhcccCCCCCcchhHHHHHHHHHhhcccc--------CCCCCcccccceEeccCCceeeeeecC
Confidence 345566666666666666554 57778899999999999988642 11112233333332 21 3
Q ss_pred CCCccCCCCEEEEEEeeEeCCEEE
Q 027841 187 DSRALEDGDTINIDVTVYLNVSIF 210 (218)
Q Consensus 187 ~~r~Lq~GDiV~IDvg~~~~GY~~ 210 (218)
++-+|+.|.++++.-|-+-+|-+|
T Consensus 499 ~~~~l~ag~~~s~EPGYY~dg~fG 522 (606)
T KOG2413|consen 499 SNFPLQAGMVFSIEPGYYKDGEFG 522 (606)
T ss_pred CCchhcCceEeccCCcccccCcce
Confidence 566799999999999888888777
No 74
>PRK01490 tig trigger factor; Provisional
Probab=59.32 E-value=26 Score=32.84 Aligned_cols=44 Identities=20% Similarity=0.401 Sum_probs=33.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCEEEEEEeeEeCC
Q 027841 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNV 207 (218)
Q Consensus 140 GvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GDiV~IDvg~~~~G 207 (218)
-+|+.||+..+.+...+++-+. +.+++++.||.|.+|+....+|
T Consensus 131 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g 174 (435)
T PRK01490 131 EVTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDG 174 (435)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECC
Confidence 3799999999998777654321 2235689999999999998877
No 75
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=57.40 E-value=7.7 Score=28.06 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC
Q 027841 124 RLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (218)
Q Consensus 124 ~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga 159 (218)
.|+.++...+.+..+.+||+.||..++...++++|.
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 344444444444444499999999999999998764
No 76
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=55.67 E-value=72 Score=30.79 Aligned_cols=89 Identities=19% Similarity=0.175 Sum_probs=53.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhhhcCC--CCCHHHHHHHH----HHHHHHCCCCCCCC-----CCCCCCceee--ec
Q 027841 110 VHDEKGIECMRVSGRLAAQVLEYAGTLVKP--GITTDEIDKAV----HQMIIDNGAYPSPL-----GYGGFPKSVC--TS 176 (218)
Q Consensus 110 VKs~eEIe~mR~Aa~ia~~al~~a~~~ikp--GvTe~EId~~v----~~~i~~~Ga~ps~l-----~Y~~Fp~~v~--tg 176 (218)
.-|+.+.+.....- .+.++..+..+| |.|..+|.... .+.+.+.|...+.- .+.-+|..|+ .|
T Consensus 334 kFs~~Qr~LYeavL----~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLG 409 (488)
T KOG2414|consen 334 KFSDAQRDLYEAVL----QVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLG 409 (488)
T ss_pred ccCcHHHHHHHHHH----HHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcC
Confidence 33555555554444 445555666777 89988887654 45566677654321 1223455443 22
Q ss_pred CCCcccccC---CCCCccCCCCEEEEEEeeEe
Q 027841 177 VNECICHGI---PDSRALEDGDTINIDVTVYL 205 (218)
Q Consensus 177 ~N~~i~Hgi---P~~r~Lq~GDiV~IDvg~~~ 205 (218)
. ..|-. |.+.+|++|-++.|+-|+|+
T Consensus 410 m---DVHD~p~v~r~~pL~pg~ViTIEPGvYI 438 (488)
T KOG2414|consen 410 M---DVHDCPTVSRDIPLQPGMVITIEPGVYI 438 (488)
T ss_pred c---ccccCCCCCCCccCCCCceEEecCceec
Confidence 2 23433 45889999999999999985
No 77
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=54.06 E-value=26 Score=25.31 Aligned_cols=47 Identities=19% Similarity=0.257 Sum_probs=31.2
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCEEEE
Q 027841 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (218)
Q Consensus 137 ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GDiV~I 199 (218)
++.|.|-.|++..+|.-+.+. |-...-.+ +.....+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~-----------F~~A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKG-----------FIEAVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhc-----------cEEEEEcc-----CEEECCCEEecCCCEEEE
Confidence 566899999999999766542 22211122 223346789999999987
No 78
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=48.34 E-value=33 Score=20.77 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 027841 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (218)
Q Consensus 122 Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~ 155 (218)
.|.+...++..+...++...|+.||...+++.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 3677788889999999999999999999998764
No 79
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=47.98 E-value=53 Score=30.50 Aligned_cols=44 Identities=25% Similarity=0.543 Sum_probs=33.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCC-CCCccCCCCEEEEEEeeEeCC
Q 027841 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDTINIDVTVYLNV 207 (218)
Q Consensus 140 GvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP-~~r~Lq~GDiV~IDvg~~~~G 207 (218)
-+|+.+|++.++....+++.+. | ++++++.||.|.+|+....+|
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~~gD~V~v~~~~~~dg 163 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLV------------------------PVERRAAEKGDRVTIDFEGFIDG 163 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccccCCCCEEEEEEEEEECC
Confidence 3799999999998887765321 1 235789999999999887766
No 80
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=45.62 E-value=50 Score=31.71 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCEEEEEEeeEeCCE
Q 027841 141 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNVS 208 (218)
Q Consensus 141 vTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GDiV~IDvg~~~~GY 208 (218)
+|+.||+..++.....+..+ .|.++.++.||.|.||+.++.||=
T Consensus 132 v~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 132 VTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred cCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 67888998888765543221 122222899999999999998873
No 81
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=39.03 E-value=85 Score=25.87 Aligned_cols=40 Identities=8% Similarity=0.019 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCC
Q 027841 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYP 161 (218)
Q Consensus 122 Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~p 161 (218)
+..+++++...+....+.+++..||..++++.|++.|...
T Consensus 84 ~~~i~~~V~~~l~~~~~~~IsveEIqDiVE~~L~~~~~~a 123 (154)
T PRK00464 84 IEAAVSRIERQLRASGEREVPSKEIGELVMEELKKLDEVA 123 (154)
T ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 3345555555555555568999999999999999988653
No 82
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=38.05 E-value=44 Score=22.66 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHhh----hcCCC-CCHHHHHHHHH
Q 027841 118 CMRVSGRLAAQVLEYAGT----LVKPG-ITTDEIDKAVH 151 (218)
Q Consensus 118 ~mR~Aa~ia~~al~~a~~----~ikpG-vTe~EId~~v~ 151 (218)
.+.+|++|+.++++.-.. .+..| +|+.|+++++.
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~ 48 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLD 48 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTS
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcC
Confidence 567888899888765432 24456 79999998865
No 83
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=33.55 E-value=1.3e+02 Score=21.66 Aligned_cols=48 Identities=23% Similarity=0.338 Sum_probs=31.4
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCEEEE
Q 027841 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (218)
Q Consensus 137 ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GDiV~I 199 (218)
++.|.|-.|.+..+|.-+.+. |-..+.. .| ..-.+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-----------f~~Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-----------FLHAIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-----------ceeeEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 466999999999999766542 2111111 12 233456789999999986
No 84
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=31.99 E-value=1e+02 Score=19.57 Aligned_cols=43 Identities=9% Similarity=-0.027 Sum_probs=34.1
Q ss_pred ccCHHHHHHHHHHHHHHHHH-HHHHhhhcCCCCCHHHHHHHHHH
Q 027841 110 VHDEKGIECMRVSGRLAAQV-LEYAGTLVKPGITTDEIDKAVHQ 152 (218)
Q Consensus 110 VKs~eEIe~mR~Aa~ia~~a-l~~a~~~ikpGvTe~EId~~v~~ 152 (218)
--|++|-+.+.+|.+....- ...+...+..|-|..++......
T Consensus 3 ~Wt~eE~~~l~~~v~~~g~~~W~~Ia~~~~~~Rt~~qc~~~~~~ 46 (48)
T PF00249_consen 3 PWTEEEDEKLLEAVKKYGKDNWKKIAKRMPGGRTAKQCRSRYQN 46 (48)
T ss_dssp SS-HHHHHHHHHHHHHSTTTHHHHHHHHHSSSSTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcHHHHHHHHcCCCCCHHHHHHHHHh
Confidence 35889999999999888877 88888888778998888766554
No 85
>PRK15131 mannose-6-phosphate isomerase; Provisional
Probab=31.77 E-value=2.1e+02 Score=26.99 Aligned_cols=45 Identities=20% Similarity=0.291 Sum_probs=30.6
Q ss_pred hhcCcccccccchhhhhccCCCCceeeeEeeccccchhhhhhhccc
Q 027841 18 FVGNRFIHSTQPLNQLFGYNSGKNQVSMQLSRTFSGLADLLFNRRN 63 (218)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (218)
++|.........|+=||..---.+-||+|++-. ...++.+|.|.+
T Consensus 69 ~LG~~~~~~f~~lP~L~KiL~a~~~LSIQvHPd-~~~A~~~f~~e~ 113 (389)
T PRK15131 69 LLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPN-KRAAEIGFAKEN 113 (389)
T ss_pred HcCcchhhhcCCCceEeeeeccCCCceeEeCCC-HHHHHHHhhhcc
Confidence 567655433223666667777789999999997 556777776544
No 86
>smart00739 KOW KOW (Kyprides, Ouzounis, Woese) motif. Motif in ribosomal proteins, NusG, Spt5p, KIN17 and T54.
Probab=31.14 E-value=90 Score=17.10 Aligned_cols=22 Identities=18% Similarity=0.158 Sum_probs=16.0
Q ss_pred cCCCCEEEEEEeeEeCCEEE-EEE
Q 027841 191 LEDGDTINIDVTVYLNVSIF-LHA 213 (218)
Q Consensus 191 Lq~GDiV~IDvg~~~~GY~~-~tR 213 (218)
++.||.|.|-- ..+.|..+ +.+
T Consensus 2 ~~~G~~V~I~~-G~~~g~~g~i~~ 24 (28)
T smart00739 2 FEVGDTVRVIA-GPFKGKVGKVLE 24 (28)
T ss_pred CCCCCEEEEeE-CCCCCcEEEEEE
Confidence 67899999944 45777777 554
No 87
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=26.90 E-value=47 Score=22.96 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=14.0
Q ss_pred HHhhhcCCCCCHHHHHHHH
Q 027841 132 YAGTLVKPGITTDEIDKAV 150 (218)
Q Consensus 132 ~a~~~ikpGvTe~EId~~v 150 (218)
...+.|++|||.+||.+++
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 3456799999999998664
No 88
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=26.60 E-value=1.7e+02 Score=27.47 Aligned_cols=49 Identities=22% Similarity=0.411 Sum_probs=33.2
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCccccc---CCCCCccCCCCEEEE
Q 027841 138 KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG---IPDSRALEDGDTINI 199 (218)
Q Consensus 138 kpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~Hg---iP~~r~Lq~GDiV~I 199 (218)
+.|-|-.|+++.+|.-+.++ |....-.|.+ ..|. .--+.+|+++|+|.|
T Consensus 311 r~GsTV~Dvc~~IH~~l~~~-----------FryA~VWGkS--vk~~~QrVG~dHvLeD~DIV~I 362 (365)
T COG1163 311 RRGSTVGDVCRKIHRDLVEN-----------FRYARVWGKS--VKHPGQRVGLDHVLEDEDIVEI 362 (365)
T ss_pred eCCCcHHHHHHHHHHHHHHh-----------cceEEEeccC--CCCCccccCcCcCccCCCeEEE
Confidence 34789999999999998874 3333334442 2342 123679999999987
No 89
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=26.39 E-value=89 Score=25.03 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHHH
Q 027841 124 RLAAQVLEYAGTLVKPGITTDEIDKAVHQ 152 (218)
Q Consensus 124 ~ia~~al~~a~~~ikpGvTe~EId~~v~~ 152 (218)
.+|.+.-..+.+.++.|.|++||-+.+.+
T Consensus 57 ~iA~dmR~~Vr~~i~~G~Sd~eI~~~~v~ 85 (126)
T TIGR03147 57 PIAYDLRHEVYSMVNEGKSNQQIIDFMTA 85 (126)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 58888899999999999999998766443
No 90
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=25.93 E-value=2.6e+02 Score=26.43 Aligned_cols=51 Identities=14% Similarity=0.288 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCC
Q 027841 112 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 162 (218)
Q Consensus 112 s~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps 162 (218)
|+.||+-+-++-..-...+......+-|..++.||...++..+.+.-+.|.
T Consensus 98 s~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT 148 (381)
T PF09506_consen 98 SDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT 148 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 889999999999999999999999999999999999999999999888774
No 91
>PRK05423 hypothetical protein; Provisional
Probab=25.77 E-value=98 Score=23.84 Aligned_cols=28 Identities=25% Similarity=0.493 Sum_probs=22.4
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 027841 128 QVLEYAGTLVKPGITTDEIDKAVHQMII 155 (218)
Q Consensus 128 ~al~~a~~~ikpGvTe~EId~~v~~~i~ 155 (218)
..|+-..+.|+||||..||..++..+-.
T Consensus 43 lLLdNL~~YIk~~Ms~e~i~~II~nMr~ 70 (104)
T PRK05423 43 LLLDNLSDYIKPGMSIEEIQGIIANMKS 70 (104)
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHHHh
Confidence 3466777889999999999999876543
No 92
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=24.52 E-value=3.8e+02 Score=25.47 Aligned_cols=83 Identities=19% Similarity=0.175 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCC---------CCCCceeeecCCCcccccCCCCCccC
Q 027841 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY---------GGFPKSVCTSVNECICHGIPDSRALE 192 (218)
Q Consensus 122 Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y---------~~Fp~~v~tg~N~~i~HgiP~~r~Lq 192 (218)
+.+.|..|++.|.+.++||-+-+.|-+.+.+.+...++.|..-+- .|-++++......--- .-..-.++
T Consensus 145 vI~AAh~A~eaa~rllkpgn~n~~vT~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~--~~e~~~fe 222 (398)
T KOG2776|consen 145 VIAAAHLAAEAALRLLKPGNTNTQVTRAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKK--EHEKTEFE 222 (398)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhc--cccccccc
Confidence 344556688889999999999988999998888888876631000 0122222211111000 01234688
Q ss_pred CCCEEEEEEeeEeC
Q 027841 193 DGDTINIDVTVYLN 206 (218)
Q Consensus 193 ~GDiV~IDvg~~~~ 206 (218)
+++...+|+.+..+
T Consensus 223 ~~Evya~Di~~stg 236 (398)
T KOG2776|consen 223 EHEVYAIDILVSTG 236 (398)
T ss_pred cceeEEEEEEEecC
Confidence 88999999988763
No 93
>PF03701 UPF0181: Uncharacterised protein family (UPF0181); InterPro: IPR005371 This family contains small proteins of about 50 amino acids of unknown function. The family includes YoaH P76260 from SWISSPROT.
Probab=24.43 E-value=1.3e+02 Score=20.39 Aligned_cols=30 Identities=27% Similarity=0.313 Sum_probs=24.5
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHHHC
Q 027841 128 QVLEYAGTLVKPGITTDEIDKAVHQMIIDN 157 (218)
Q Consensus 128 ~al~~a~~~ikpGvTe~EId~~v~~~i~~~ 157 (218)
++.+.+-+++..||+..|.-+++.+.+++.
T Consensus 15 ~AvE~Iq~LMaqGmSsgEAI~~VA~~iRe~ 44 (51)
T PF03701_consen 15 QAVERIQELMAQGMSSGEAIAIVAQEIREE 44 (51)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 456667777888999999999999888874
No 94
>PRK07440 hypothetical protein; Provisional
Probab=24.35 E-value=1.7e+02 Score=20.50 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=22.5
Q ss_pred ceeeecCCCcccc-cCCCCCccCCCCEEEEEEeeE
Q 027841 171 KSVCTSVNECICH-GIPDSRALEDGDTINIDVTVY 204 (218)
Q Consensus 171 ~~v~tg~N~~i~H-giP~~r~Lq~GDiV~IDvg~~ 204 (218)
..+..-.|..+.+ ....+..|++||-|-| +.+.
T Consensus 34 ~~vav~~N~~iv~r~~w~~~~L~~gD~IEI-v~~v 67 (70)
T PRK07440 34 RLVAVEYNGEILHRQFWEQTQVQPGDRLEI-VTIV 67 (70)
T ss_pred CeEEEEECCEEeCHHHcCceecCCCCEEEE-EEEe
Confidence 4566777866543 3447789999999887 4443
No 95
>COG3140 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.16 E-value=1e+02 Score=21.43 Aligned_cols=30 Identities=23% Similarity=0.310 Sum_probs=25.0
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHHHC
Q 027841 128 QVLEYAGTLVKPGITTDEIDKAVHQMIIDN 157 (218)
Q Consensus 128 ~al~~a~~~ikpGvTe~EId~~v~~~i~~~ 157 (218)
++.+.+.+.+..||+..|.-+++...+++.
T Consensus 15 ~AVE~Iq~lMaeGmSsGEAIa~VA~elRe~ 44 (60)
T COG3140 15 KAVERIQELMAEGMSSGEAIALVAQELREN 44 (60)
T ss_pred HHHHHHHHHHHccccchhHHHHHHHHHHHH
Confidence 466677777889999999999999999875
No 96
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=23.85 E-value=2.9e+02 Score=26.18 Aligned_cols=51 Identities=16% Similarity=0.288 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCC
Q 027841 112 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 162 (218)
Q Consensus 112 s~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps 162 (218)
|+.||+-+-++-..-...+......+-|..++.|+...++..+.+.-+.|.
T Consensus 104 s~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT 154 (389)
T TIGR02399 104 SKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT 154 (389)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 889999999999999999999999999999999999999999999888774
No 97
>PF12926 MOZART2: Mitotic-spindle organizing gamma-tubulin ring associated; InterPro: IPR024332 The MOZART2 family of proteins (also known as FAM128 and Mitotic-spindle organizing protein 2) operate as part of the gamma-tubulin ring complex, gamma-TuRC, one of the complexes necessary for chromosome segregation. This complex is located at centrosomes and mediates the formation of bipolar spindles in mitosis; it consists of six subunits. However, unlike the other four known subunits, the MOZART proteins, both 1 and 2, do not carry the conserved 'Spc97-Spc98' GCP domain, so the TUBGCP nomenclature cannot be used for it. The exact function of MOZART2 is not clear [].
Probab=23.52 E-value=2.2e+02 Score=21.53 Aligned_cols=52 Identities=13% Similarity=0.204 Sum_probs=41.2
Q ss_pred CcccCHHHHHHHHHHHH----HHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCC
Q 027841 108 PEVHDEKGIECMRVSGR----LAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (218)
Q Consensus 108 R~VKs~eEIe~mR~Aa~----ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga 159 (218)
..+.+++|.|.+.-|.. +.-++++.+.+.++-++.-..|..++.+.+.....
T Consensus 20 k~~Ls~eE~EL~ELa~~AGv~~dp~VFriildLL~~nVsP~AI~qmLK~m~s~~~~ 75 (88)
T PF12926_consen 20 KKVLSAEEVELYELAQLAGVPMDPEVFRIILDLLRLNVSPDAIFQMLKSMCSGSRL 75 (88)
T ss_pred HhccCHHHHHHHHHHHHhCCCcChHHHHHHHHHHHcCCCHHHHHHHHHHHHccccc
Confidence 35789999887766553 33488999999999999999999998888766543
No 98
>PF09424 YqeY: Yqey-like protein; InterPro: IPR019004 Putative protein of unknown function; the authentic protein is detected in highly purified mitochondria in high-throughput studies; YOR215C is not an essential gene. ; PDB: 1NG6_A.
Probab=23.03 E-value=3e+02 Score=22.16 Aligned_cols=26 Identities=23% Similarity=0.390 Sum_probs=17.0
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHCCCC
Q 027841 135 TLVKPGITTDEIDKAVHQMIIDNGAY 160 (218)
Q Consensus 135 ~~ikpGvTe~EId~~v~~~i~~~Ga~ 160 (218)
+.+-+-+|+.||..++.+.+.+.|+.
T Consensus 85 ~yLP~~lseeEi~~~v~~~i~e~ga~ 110 (143)
T PF09424_consen 85 EYLPKQLSEEEIEAIVEEAIAELGAS 110 (143)
T ss_dssp GGS-----HHHHHHHHHHHHHHTT--
T ss_pred HhCcCCCCHHHHHHHHHHHHHHhCCC
Confidence 45666799999999999999998875
No 99
>PRK06488 sulfur carrier protein ThiS; Validated
Probab=22.67 E-value=1.9e+02 Score=19.59 Aligned_cols=28 Identities=29% Similarity=0.368 Sum_probs=19.7
Q ss_pred eeeecCCCccc-ccCCCCCccCCCCEEEE
Q 027841 172 SVCTSVNECIC-HGIPDSRALEDGDTINI 199 (218)
Q Consensus 172 ~v~tg~N~~i~-HgiP~~r~Lq~GDiV~I 199 (218)
.+....|..+. .....+.+|++||-|-|
T Consensus 30 ~vavavN~~iv~~~~~~~~~L~dgD~Iei 58 (65)
T PRK06488 30 WLATAVNGELVHKEARAQFVLHEGDRIEI 58 (65)
T ss_pred eEEEEECCEEcCHHHcCccccCCCCEEEE
Confidence 45667776554 33345789999999887
No 100
>PRK10144 formate-dependent nitrite reductase complex subunit NrfF; Provisional
Probab=22.39 E-value=1.2e+02 Score=24.35 Aligned_cols=28 Identities=18% Similarity=0.097 Sum_probs=24.0
Q ss_pred HHHHHHHHHHhhhcCCCCCHHHHHHHHH
Q 027841 124 RLAAQVLEYAGTLVKPGITTDEIDKAVH 151 (218)
Q Consensus 124 ~ia~~al~~a~~~ikpGvTe~EId~~v~ 151 (218)
.+|.+.-..+.+.++.|.|.+||-+.+.
T Consensus 57 ~iA~dmR~~Vr~~i~~G~sd~eI~~~~v 84 (126)
T PRK10144 57 PVAVSMRHQVYSMVAEGKSEVEIIGWMT 84 (126)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5888888999999999999999876644
No 101
>PF02824 TGS: TGS domain; InterPro: IPR004095 The TGS domain is present in a number of enzymes, for example, in threonyl-tRNA synthetase (ThrRS), GTPase, and guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (SpoT) []. The TGS domain is also present at the amino terminus of the uridine kinase from the spirochaete Treponema pallidum (but not any other organism, including the related spirochaete Borrelia burgdorferi). TGS is a small domain that consists of ~50 amino acid residues and is predicted to possess a predominantly beta-sheet structure. There is no direct information on the functions of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role []. ; PDB: 1WXQ_A 1NYR_B 1NYQ_B 2KMM_A 1WWT_A 1TKE_A 1TKG_A 1TJE_A 1QF6_A 1TKY_A ....
Probab=21.87 E-value=1.2e+02 Score=20.43 Aligned_cols=46 Identities=26% Similarity=0.402 Sum_probs=31.4
Q ss_pred cCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCEEEE
Q 027841 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (218)
Q Consensus 137 ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg~N~~i~HgiP~~r~Lq~GDiV~I 199 (218)
+..|.|-.|++..++..+.+.- +..-+|.. -..-+++|++||.|.|
T Consensus 13 ~~~g~T~~d~A~~I~~~l~~~~--------------~~A~Vng~---~vdl~~~L~~~d~v~i 58 (60)
T PF02824_consen 13 LPEGSTVLDVAYSIHSSLAKRA--------------VAAKVNGQ---LVDLDHPLEDGDVVEI 58 (60)
T ss_dssp EETTBBHHHHHHHHSHHHHHCE--------------EEEEETTE---EEETTSBB-SSEEEEE
T ss_pred CCCCCCHHHHHHHHCHHHHhhe--------------eEEEEcCE---ECCCCCCcCCCCEEEE
Confidence 6679999999999998887631 12233432 1235689999999876
No 102
>PRK05114 hypothetical protein; Provisional
Probab=21.40 E-value=1.6e+02 Score=20.53 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=25.3
Q ss_pred HHHHHHhhhcCCCCCHHHHHHHHHHHHHHCC
Q 027841 128 QVLEYAGTLVKPGITTDEIDKAVHQMIIDNG 158 (218)
Q Consensus 128 ~al~~a~~~ikpGvTe~EId~~v~~~i~~~G 158 (218)
+|.+.+-+++..||+..|.-+++.+.+++..
T Consensus 15 ~AVErIq~LMaqGmSsgEAI~~VA~eiRe~~ 45 (59)
T PRK05114 15 KAVERIQELMAQGMSSGEAIALVAEELRANH 45 (59)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHHHH
Confidence 4566677778889999999999999998753
No 103
>PF00725 3HCDH: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; InterPro: IPR006108 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major region of similarities in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3MOG_A 2WTB_A 3ADP_A 3ADO_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B 3K6J_A 1ZCJ_A ....
Probab=20.96 E-value=2.2e+02 Score=20.46 Aligned_cols=30 Identities=37% Similarity=0.578 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhhhcCCC-CCHHHHHHHHHH
Q 027841 123 GRLAAQVLEYAGTLVKPG-ITTDEIDKAVHQ 152 (218)
Q Consensus 123 a~ia~~al~~a~~~ikpG-vTe~EId~~v~~ 152 (218)
.++-...+.++..++..| .|-.|||..+..
T Consensus 5 nRl~~~~~~ea~~l~~egvas~~~ID~~~~~ 35 (97)
T PF00725_consen 5 NRLLAALLNEAARLVEEGVASPEDIDRAMRY 35 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 345556666777777778 678888888765
No 104
>PRK05659 sulfur carrier protein ThiS; Validated
Probab=20.77 E-value=2.5e+02 Score=18.85 Aligned_cols=27 Identities=37% Similarity=0.495 Sum_probs=18.1
Q ss_pred eeecCCCccc-ccCCCCCccCCCCEEEE
Q 027841 173 VCTSVNECIC-HGIPDSRALEDGDTINI 199 (218)
Q Consensus 173 v~tg~N~~i~-HgiP~~r~Lq~GDiV~I 199 (218)
+..-.|..+. .....+.+|++||-|-|
T Consensus 32 vav~vNg~iv~r~~~~~~~l~~gD~vei 59 (66)
T PRK05659 32 VAVEVNGEIVPRSQHASTALREGDVVEI 59 (66)
T ss_pred EEEEECCeEeCHHHcCcccCCCCCEEEE
Confidence 3444675443 33457889999999887
No 105
>PF07051 OCIA: Ovarian carcinoma immunoreactive antigen (OCIA); InterPro: IPR009764 This family consists of several ovarian carcinoma immunoreactive antigen (OCIA) and related eukaryotic sequences. The function of this family is unknown [,].
Probab=20.39 E-value=2e+02 Score=22.57 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=43.4
Q ss_pred CcccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeec
Q 027841 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTS 176 (218)
Q Consensus 108 R~VKs~eEIe~mR~Aa~ia~~al~~a~~~ikpGvTe~EId~~v~~~i~~~Ga~ps~l~Y~~Fp~~v~tg 176 (218)
..+-|+||+..+|++.+- ..-.-++.-.-+...+.+.++..|...+--.|..+|+++-.|
T Consensus 23 ~~~~T~EE~kvlrEC~~E---------SFwyRslPls~~s~~~t~~lv~~G~l~~~~rfG~~PKv~~ag 82 (111)
T PF07051_consen 23 PYQLTEEERKVLRECNEE---------SFWYRSLPLSAGSMLVTQGLVKKGYLKSSPRFGSLPKVAFAG 82 (111)
T ss_pred CccCCHHHHHHHHHHHHh---------hhHhccCcHHHHHHHHHHHHHHcCcccCCCccccccHHHHHH
Confidence 467899999999998754 223345666777788888899999765545577888875444
No 106
>PLN00190 60S ribosomal protein L21; Provisional
Probab=20.03 E-value=86 Score=26.15 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=21.5
Q ss_pred CccCCCCEEEEEEeeEe-C-----CEEE-EEEEEEe
Q 027841 189 RALEDGDTINIDVTVYL-N-----VSIF-LHATFYH 217 (218)
Q Consensus 189 r~Lq~GDiV~IDvg~~~-~-----GY~~-~tRTf~V 217 (218)
+..+.||+|-|++-+.+ . -||| +.+.|-+
T Consensus 32 ~~yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv 67 (158)
T PLN00190 32 RTFKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNV 67 (158)
T ss_pred HHhcCCCEEEEEecCCeecCCCcccccCCCeEEEee
Confidence 46788999999886653 3 4888 8877654
Done!