BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027845
(218 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 338
Score = 245 bits (625), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 149/193 (77%), Gaps = 5/193 (2%)
Query: 7 RIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPY-T 65
R+KLG+QGLEVS G GCM +S Y PE IA+I A N GIT DTSDIYG +
Sbjct: 4 RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGS 63
Query: 66 NEILVGKALKGGMRERVELATKFGI---SFADGGKIRGDPAYVRACCEASLKRLDIDCID 122
NE L+GKALK RE++++ TKFGI F+ G K +G P YVR+CCEASLKRLD+D ID
Sbjct: 64 NEELLGKALKQLPREKIQVGTKFGIHEIGFS-GVKAKGTPDYVRSCCEASLKRLDVDYID 122
Query: 123 LYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSL 182
L+Y HR+DT +PIE+T+GELKKLVEEGKIKY+GLSEA TIRRAHAVHP+TA+Q+E+SL
Sbjct: 123 LFYIHRIDTTVPIEITMGELKKLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYSL 182
Query: 183 WSRDVEAEIVPTC 195
W+RD+E EIVP C
Sbjct: 183 WTRDIEDEIVPLC 195
>pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 245 bits (625), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 149/193 (77%), Gaps = 5/193 (2%)
Query: 7 RIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPY-T 65
R+KLG+QGLEVS G GCM +S Y PE IA+I A N GIT DTSDIYG +
Sbjct: 3 RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGS 62
Query: 66 NEILVGKALKGGMRERVELATKFGI---SFADGGKIRGDPAYVRACCEASLKRLDIDCID 122
NE L+GKALK RE++++ TKFGI F+ G K +G P YVR+CCEASLKRLD+D ID
Sbjct: 63 NEELLGKALKQLPREKIQVGTKFGIHEIGFS-GVKAKGTPDYVRSCCEASLKRLDVDYID 121
Query: 123 LYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSL 182
L+Y HR+DT +PIE+T+GELKKLVEEGKIKY+GLSEA TIRRAHAVHP+TA+Q+E+SL
Sbjct: 122 LFYIHRIDTTVPIEITMGELKKLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYSL 181
Query: 183 WSRDVEAEIVPTC 195
W+RD+E EIVP C
Sbjct: 182 WTRDIEDEIVPLC 194
>pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 243 bits (619), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 122/193 (63%), Positives = 148/193 (76%), Gaps = 5/193 (2%)
Query: 7 RIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPY-T 65
R+KLG+QGLEVS G GCM +S Y PE IA+I A N GIT DTSDIYG +
Sbjct: 4 RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGS 63
Query: 66 NEILVGKALKGGMRERVELATKFGI---SFADGGKIRGDPAYVRACCEASLKRLDIDCID 122
NE L+GKALK RE++++ TKFGI F+ G K +G P YVR+CCEASLKRLD+D ID
Sbjct: 64 NEELLGKALKQLPREKIQVGTKFGIHEIGFS-GVKAKGTPDYVRSCCEASLKRLDVDYID 122
Query: 123 LYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSL 182
L+Y HR+DT +PIE+T+GEL KLVEEGKIKY+GLSEA TIRRAHAVHP+TA+Q+E+SL
Sbjct: 123 LFYIHRIDTTVPIEITMGELXKLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYSL 182
Query: 183 WSRDVEAEIVPTC 195
W+RD+E EIVP C
Sbjct: 183 WTRDIEDEIVPLC 195
>pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 236 bits (601), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 144/193 (74%), Gaps = 5/193 (2%)
Query: 7 RIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPY-T 65
R+KLG+QGLEVS G GCM +S Y PE IA+I A N GIT DTSDIYG +
Sbjct: 3 RVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGS 62
Query: 66 NEILVGKALKGGMRERVELATKFGI---SFADGGKIRGDPAYVRACCEASLKRLDIDCID 122
NE L+GKALK RE +++ TKFGI F+ G K G P YVR+CCEASLKRLD+D ID
Sbjct: 63 NEELLGKALKQLPREXIQVGTKFGIHEIGFS-GVKAXGTPDYVRSCCEASLKRLDVDYID 121
Query: 123 LYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSL 182
L+Y HR+DT +PIE+T+GEL LVEEGKI Y+GLSEA TIRRAHAVHP+TA+Q+E+SL
Sbjct: 122 LFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVHPVTALQIEYSL 181
Query: 183 WSRDVEAEIVPTC 195
W+RD+E EIVP C
Sbjct: 182 WTRDIEDEIVPLC 194
>pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo
Form)
pdb|1YNP|B Chain B, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo
Form)
pdb|1YNQ|A Chain A, Aldo-Keto Reductase Akr11c1 From Bacillus Halodurans (Holo
Form)
pdb|1YNQ|B Chain B, Aldo-Keto Reductase Akr11c1 From Bacillus Halodurans (Holo
Form)
Length = 317
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 10/187 (5%)
Query: 5 VKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPY 64
+K+ +LG+ L VS G GCM++ E ++ + GI LDT+D+Y
Sbjct: 21 MKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQG 74
Query: 65 TNEILVGKALKGGMRERVELATKFGISFADGGK-IRGDP--AYVRACCEASLKRLDIDCI 121
NE VGKALKG R+ + LATK G F G + DP AY++ + SL+RL D I
Sbjct: 75 LNEQFVGKALKG-RRQDIILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYI 133
Query: 122 DLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWS 181
DLY H PI+ TI ++L +EG I+Y G+S I+ I ++ +++S
Sbjct: 134 DLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYS 193
Query: 182 LWSRDVE 188
+ R E
Sbjct: 194 ILDRRPE 200
>pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11b(Holo)
pdb|1PZ1|B Chain B, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11b(Holo)
Length = 333
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 10 LGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEIL 69
+ G+E S GLG A+ E I I A++ GITL+DT+ YG +E +
Sbjct: 6 IADTGIEASRIGLGTWAIGGTXWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEI 65
Query: 70 VGKALKG-GMRERVELATKFGISFADGGKIR-GDPAYVRACCEASLKRLDIDCIDLYYQH 127
VGKA+K R++V LATK + + + R + A + E SLKRL D IDLY H
Sbjct: 66 VGKAIKEYXKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVH 125
Query: 128 RVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSLWSRDV 187
D +PIE T K+L + GKI+ IG+S AV P+ +Q ++L+ R+
Sbjct: 126 WPDPLVPIEETAEVXKELYDAGKIRAIGVSNFSIEQXDTFRAVAPLHTIQPPYNLFEREX 185
Query: 188 EAEIVP 193
E ++P
Sbjct: 186 EESVLP 191
>pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11a(Apo)
pdb|1PZ0|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11a(Holo)
Length = 312
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 12/195 (6%)
Query: 6 KRIKLGSQGLEVSAQGLGCMAM--SCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGP 63
K+ KLG L+V GLG A+ LY P E L+ AI +G+T LDT+ IYG
Sbjct: 2 KKAKLGKSDLQVFPIGLGTNAVGGHNLY-PNLNEETGKELVREAIRNGVTXLDTAYIYGI 60
Query: 64 YTNEILVGKALKGGMRERVELATKF-----GISFADGGKIRGDPAYVRACCEASLKRLDI 118
+E L+G+ L+ RE V +ATK G F P +++ + SLKRL+
Sbjct: 61 GRSEELIGEVLREFNREDVVIATKAAHRKQGNDFV----FDNSPDFLKKSVDESLKRLNT 116
Query: 119 DCIDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQL 178
D IDL+Y H D P + + L + + GKI+ IG+S ++ A+ + +Q
Sbjct: 117 DYIDLFYIHFPDEHTPKDEAVNALNEXKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQG 176
Query: 179 EWSLWSRDVEAEIVP 193
E++L +R+ E P
Sbjct: 177 EYNLLNREAEKTFFP 191
>pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From
Gluconobacter Oxydans
Length = 348
Score = 89.7 bits (221), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 9/184 (4%)
Query: 17 VSAQGLGCMAMS-CLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALK 75
+S LG A+ ++G P+ + + + IH A++ GI L+DT+ +YG +E +VG+AL
Sbjct: 31 LSRVALGTWAIGGWMWGGPDDD-NGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRAL- 88
Query: 76 GGMRERVELATKFGISFA----DGGKIRGD--PAYVRACCEASLKRLDIDCIDLYYQHRV 129
+ +ATK G+ + K+ D PA +R E SL+RL ++ IDL H
Sbjct: 89 AEKPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWP 148
Query: 130 DTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLEWSLWSRDVEA 189
D K PI+ + EL+KL ++GKI+ +G+S + V P+ +Q +L+ R +E
Sbjct: 149 DDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEK 208
Query: 190 EIVP 193
+I+P
Sbjct: 209 DILP 212
>pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
pdb|3ERP|B Chain B, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
Length = 353
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 4 TVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGP 63
T++ + G G+++ A LG +G + AL+ A + GIT D ++ YGP
Sbjct: 33 TMEYRRCGRSGVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGP 89
Query: 64 Y--TNEILVGKALKGGM---RERVELATKFGISFADGGK-IRGDPAYVRACCEASLKRLD 117
+ E G+ L+ R+ + ++TK G + DG G Y+ A + SLKR+
Sbjct: 90 PPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASLDQSLKRMG 149
Query: 118 IDCIDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAV-----HP 172
++ +D++Y HR D + P++ T+ L LV GK Y+G+S A R+A + P
Sbjct: 150 LEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTP 209
Query: 173 ITAVQLEWSLWSRDVE 188
Q ++SL+ R VE
Sbjct: 210 CLIHQPKYSLFERWVE 225
>pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph
pdb|1LQA|B Chain B, Tas Protein From Escherichia Coli In Complex With Nadph
Length = 346
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYG----PY 64
++ LEVS GLG M +G E D A + +A+ GI L+D +++Y P
Sbjct: 5 RIPHSSLEVSTLGLGTMT----FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPE 60
Query: 65 TN---EILVGKAL-KGGMRERVELATKF-GISFADGGKIRGDPAY----VRACCEASLKR 115
T E VG L K G RE++ +A+K G S + IR D A +R SLKR
Sbjct: 61 TQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKR 120
Query: 116 LDIDCIDLYYQH---------------RVDTKIPIEV--TIGELKKLVEEGKIKYIGLSE 158
L D +DLY H D+ + + T+ L + GKI+YIG+S
Sbjct: 121 LQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN 180
Query: 159 ACAATIRR------AHAVHPITAVQLEWSLWSRDVE 188
A + R H + I +Q +SL +R E
Sbjct: 181 ETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFE 216
>pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|B Chain B, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|C Chain C, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|D Chain D, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|E Chain E, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|F Chain F, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|G Chain G, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|H Chain H, Crystal Structure Of Yghz From E. Coli
pdb|4AST|A Chain A, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|B Chain B, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|C Chain C, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|D Chain D, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|E Chain E, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|F Chain F, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|G Chain G, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|H Chain H, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
Length = 346
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 11 GSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPY--TNEI 68
G GL + A LG +G A++ A + GIT D ++ YGP + E
Sbjct: 19 GKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEE 75
Query: 69 LVGKALK---GGMRERVELATKFGISFADGGKIRGDP-AYVRACCEASLKRLDIDCIDLY 124
G+ L+ R+ + ++TK G G G Y+ A + SLKR+ ++ +D++
Sbjct: 76 NFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIF 135
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLS 157
Y HRVD P+E T L V+ GK Y+G+S
Sbjct: 136 YSHRVDENTPMEETASALAHAVQSGKALYVGIS 168
>pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|B Chain B, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|C Chain C, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|D Chain D, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|E Chain E, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|F Chain F, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|G Chain G, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|H Chain H, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
Length = 366
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 11 GSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPY--TNEI 68
G GL + A LG +G A++ A + GIT D ++ YGP + E
Sbjct: 39 GKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEE 95
Query: 69 LVGKALK---GGMRERVELATKFGISFADGGKIRGDP-AYVRACCEASLKRLDIDCIDLY 124
G+ L+ R+ + ++TK G G G Y+ A + SLKR+ ++ +D++
Sbjct: 96 NFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIF 155
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLS 157
Y HRVD P+E T L V+ GK Y+G+S
Sbjct: 156 YSHRVDENTPMEETASALAHAVQSGKALYVGIS 188
>pdb|1UR3|M Chain M, Crystal Structure Of The Apo Form Of The E.Coli Ydhf
Protein
Length = 319
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 10/180 (5%)
Query: 2 AGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIY 61
AG V+RI + QG E S G + +++ I ++ G+T +D +DIY
Sbjct: 20 AGLVQRITIAPQGPEFSRFVXGYWRLXDWNXSAR---QLVSFIEEHLDLGVTTVDHADIY 76
Query: 62 GPYTNEILVGKALKGG--MRERVELATKFGISFADG-----GKIRGDPAYVRACCEASLK 114
G Y E G+ALK +RER E+ +K GI+ G D ++ E SL
Sbjct: 77 GGYQCEAAFGEALKLAPHLRERXEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLI 136
Query: 115 RLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPIT 174
L D +DL HR D + K L + GK+++ G+S A + P T
Sbjct: 137 NLATDHLDLLLIHRPDPLXDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFT 196
>pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In
Complex With Cortisone
Length = 327
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LG GL VS GLG +G + L+ A ++GI L DT+++Y E+
Sbjct: 7 NLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 63
Query: 69 LVGKALK--GGMRERVELATKFGISFADGGKIRGDPAYVRA----CCEASLKRLDIDCID 122
++G +K G R + + TK FA GGK + R +ASL+RL ++ +D
Sbjct: 64 VLGNIIKKKGWRRSSLVITTKI---FA-GGKAETERGLSRKHIIEGLKASLERLQLEYVD 119
Query: 123 LYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVH------PITAV 176
+ + +R D P+E T+ + ++ +G Y G S + I A++V P
Sbjct: 120 VVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICE 179
Query: 177 QLEWSLWSRD-VEAEI 191
Q E+ ++ R+ VE ++
Sbjct: 180 QAEYHMFQREKVEVQL 195
>pdb|1OG6|A Chain A, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
pdb|1OG6|B Chain B, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
pdb|1OG6|C Chain C, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
Length = 298
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 10/177 (5%)
Query: 5 VKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPY 64
V+RI + QG E S +G + +++ I ++ G+T +D +DIYG Y
Sbjct: 2 VQRITIAPQGPEFSRFVMGYWRLMDWNMSAR---QLVSFIEEHLDLGVTTVDHADIYGGY 58
Query: 65 TNEILVGKALKGG--MRERVELATKFGISFADG-----GKIRGDPAYVRACCEASLKRLD 117
E G+ALK +RER+E+ +K GI+ G D ++ E SL L
Sbjct: 59 QCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLA 118
Query: 118 IDCIDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPIT 174
D +DL HR D + + K L + GK+++ G+S A + P T
Sbjct: 119 TDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFT 175
>pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv
Beta-Subunit (Kcnab2)
Length = 347
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 16/194 (8%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LG GL VS GLG +G + L+ A ++GI L DT+++Y E+
Sbjct: 28 NLGKSGLRVSCLGLGTWVT---FGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEV 84
Query: 69 LVGKALKGGMRERVELATKFGISFADGGKIRGDPAYVRA----CCEASLKRLDIDCIDLY 124
++G +K R L I + GGK + R +ASL+RL ++ +D+
Sbjct: 85 VLGNIIKKKGWRRSSLVITTKIFW--GGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 142
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAV------HPITAVQL 178
+ +R D P+E T+ + ++ +G Y G S + I A++V P Q
Sbjct: 143 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQA 202
Query: 179 EWSLWSRD-VEAEI 191
E+ ++ R+ VE ++
Sbjct: 203 EYHMFQREKVEVQL 216
>pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With
Cortisone
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LG GL VS GLG +G + L+ A ++GI L DT+++Y E+
Sbjct: 7 NLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 63
Query: 69 LVGKALKGGMRERVELATKFGISFADGGKIRGDPAYVRA----CCEASLKRLDIDCIDLY 124
++G +K R L I + GGK + R +ASL+RL ++ +D+
Sbjct: 64 VLGNIIKKKGWRRSSLVITTKIFW--GGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 121
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAV 170
+ +R D P+E T+ + ++ +G Y G S + I A++V
Sbjct: 122 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSV 167
>pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In
Complex With Cortisone
Length = 327
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LG GL VS GLG +G + L+ A ++GI L DT+++Y E+
Sbjct: 7 NLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 63
Query: 69 LVGKALKGGMRERVELATKFGISFADGGKIRGDPAYVRA----CCEASLKRLDIDCIDLY 124
++G +K R L I + GGK + R +ASL+RL ++ +D+
Sbjct: 64 VLGNIIKKKGWRRSSLVITTKIFW--GGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 121
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAV 170
+ +R D P+E T+ + ++ +G Y G S + I A++V
Sbjct: 122 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSV 167
>pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|B Chain B, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|C Chain C, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|D Chain D, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
Length = 325
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LG GL VS GLG +G + L+ A ++GI L DT+++Y E+
Sbjct: 6 NLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 62
Query: 69 LVGKALKGGMRERVELATKFGISFADGGKIRGDPAYVRA----CCEASLKRLDIDCIDLY 124
++G +K R L I + GGK + R +ASL+RL ++ +D+
Sbjct: 63 VLGNIIKKKGWRRSSLVITTKIFW--GGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 120
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAV 170
+ +R D P+E T+ + ++ +G Y G S + I A++V
Sbjct: 121 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSV 166
>pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of
Voltage-Dependent K Channels
Length = 332
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LG GL VS GLG +G + L+ A ++GI L DT+++Y E+
Sbjct: 6 NLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 62
Query: 69 LVGKALKGGMRERVELATKFGISFADGGKIRGDPAYVRA----CCEASLKRLDIDCIDLY 124
++G +K R L I + GGK + R +ASL+RL ++ +D+
Sbjct: 63 VLGNIIKKKGWRRSSLVITTKIFW--GGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 120
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAV 170
+ +R D P+E T+ + ++ +G Y G S + I A++V
Sbjct: 121 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSV 166
>pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit
Complex
pdb|2R9R|A Chain A, Shaker Family Voltage Dependent Potassium Channel
(Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With
Beta Subunit
pdb|2R9R|G Chain G, Shaker Family Voltage Dependent Potassium Channel
(Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With
Beta Subunit
pdb|3LNM|A Chain A, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel
pdb|3LNM|C Chain C, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel
Length = 333
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LG GL VS GLG +G + L+ A ++GI L DT+++Y E+
Sbjct: 7 NLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 63
Query: 69 LVGKALKGGMRERVELATKFGISFADGGKIRGDPAYVRA----CCEASLKRLDIDCIDLY 124
++G +K R L I + GGK + R +ASL+RL ++ +D+
Sbjct: 64 VLGNIIKKKGWRRSSLVITTKIFW--GGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 121
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAV 170
+ +R D P+E T+ + ++ +G Y G S + I A++V
Sbjct: 122 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSV 167
>pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium
Channel Kv1.2
Length = 367
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 16/194 (8%)
Query: 9 KLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LG GL VS GLG +G + L+ A ++GI L DT+++Y E+
Sbjct: 41 NLGKSGLRVSCLGLGTW---VTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEV 97
Query: 69 LVGKALKGGMRERVELATKFGISFADGGKIRGDPAYVRA----CCEASLKRLDIDCIDLY 124
++G +K R L I + GGK + R +ASL+RL ++ +D+
Sbjct: 98 VLGNIIKKKGWRRSSLVITTKIFW--GGKAETERGLSRKHIIEGLKASLERLQLEYVDVV 155
Query: 125 YQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVH------PITAVQL 178
+ +R D P+E T+ + ++ +G Y G S + I A++V P Q
Sbjct: 156 FANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQA 215
Query: 179 EWSLWSRD-VEAEI 191
E+ ++ R+ VE ++
Sbjct: 216 EYHMFQREKVEVQL 229
>pdb|1GVE|A Chain A, Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver
pdb|1GVE|B Chain B, Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver
Length = 327
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 14/161 (8%)
Query: 42 ALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGMRE--RVELATKFGISFADGGKIR 99
A + + G T +DT+ +Y +E ++G G R +V++ATK F K
Sbjct: 26 ASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFGKTLK-- 83
Query: 100 GDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEA 159
PA VR E SLKRL +DL+Y H D PIE T+ +L +EGK +GLS
Sbjct: 84 --PADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNY 141
Query: 160 CAATI-------RRAHAVHPITAVQLEWSLWSRDVEAEIVP 193
+ + ++ + P T Q ++ +R VE E+ P
Sbjct: 142 VSWEVAEICTLCKKNGWIMP-TVYQGMYNAITRQVETELFP 181
>pdb|2BP1|A Chain A, Structure Of The Aflatoxin Aldehyde Reductase In Complex
With Nadph
pdb|2BP1|B Chain B, Structure Of The Aflatoxin Aldehyde Reductase In Complex
With Nadph
pdb|2BP1|C Chain C, Structure Of The Aflatoxin Aldehyde Reductase In Complex
With Nadph
pdb|2BP1|D Chain D, Structure Of The Aflatoxin Aldehyde Reductase In Complex
With Nadph
Length = 360
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 48 INSGITLLDTSDIYGPYTNEILVGKALKGGMRE--RVELATKFGISFADGGKIRGDPAYV 105
+ G T LDT+ +Y +E ++G G RV++ATK + DG ++ D V
Sbjct: 65 LERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATK--ANPWDGKSLKPDS--V 120
Query: 106 RACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACA---- 161
R+ E SLKRL +DL+Y H D P+E T+ ++L +EGK +GLS +
Sbjct: 121 RSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVA 180
Query: 162 --ATIRRAHAVHPITAVQLEWSLWSRDVEAEIVP 193
T+ +++ T Q ++ +R VE E+ P
Sbjct: 181 EICTLCKSNGWILPTVYQGMYNATTRQVETELFP 214
>pdb|3UP8|A Chain A, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid
Reductase B
pdb|3UP8|B Chain B, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid
Reductase B
Length = 298
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 10 LGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEIL 69
+ S G + A G G S +++ ++ A+ G +DT+ IYG NE
Sbjct: 27 VSSNGANIPALGFGTFRXSG--------AEVLRILPQALKLGFRHVDTAQIYG---NEAE 75
Query: 70 VGKAL-KGGM-RERVELATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQH 127
VG+A+ K G+ R V L TK + R D A++ A + SL++L D +DL H
Sbjct: 76 VGEAIQKSGIPRADVFLTTKVWVD-----NYRHD-AFI-ASVDESLRKLRTDHVDLLLLH 128
Query: 128 RVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVH--PITAVQLEW 180
+ +P IG L ++ GK+++IG+S A + PI Q+E+
Sbjct: 129 WPGSDVPXAERIGALNEVRNAGKVRHIGISNFNTTQXEEAARLSDAPIATNQVEY 183
>pdb|2CLP|A Chain A, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|B Chain B, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|C Chain C, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|D Chain D, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|E Chain E, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|F Chain F, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|G Chain G, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|H Chain H, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|I Chain I, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|J Chain J, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|K Chain K, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
Length = 347
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 21/199 (10%)
Query: 8 IKLGSQGLEVSAQG-----LGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYG 62
+ LG++ L + LG M M G P A+ + G T +DT+ +Y
Sbjct: 11 VDLGTENLYFQSMARPATVLGAMEM----GRRMDAPTSAAVTRAFLERGHTEIDTAFVYS 66
Query: 63 PYTNEILVGKALKGGMRE--RVELATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDC 120
+E ++G RV++ TK F + K P +R E SLKRL
Sbjct: 67 EGQSETILGGLGLRLGGSDCRVKIDTKAIPLFGNSLK----PDSLRFQLETSLKRLQCPR 122
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACA------ATIRRAHAVHPIT 174
+DL+Y H D P+E T+ +L +EGK +GLS A T+ +++ T
Sbjct: 123 VDLFYLHMPDHSTPVEETLRACHQLHQEGKFVELGLSNYAAWEVAEICTLCKSNGWILPT 182
Query: 175 AVQLEWSLWSRDVEAEIVP 193
Q ++ +R VE E+ P
Sbjct: 183 VYQGMYNAITRQVETELFP 201
>pdb|4EXA|A Chain A, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|B Chain B, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|C Chain C, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|D Chain D, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|E Chain E, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|F Chain F, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXB|A Chain A, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|B Chain B, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|C Chain C, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|D Chain D, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|E Chain E, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|F Chain F, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
Length = 292
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 75/165 (45%), Gaps = 26/165 (15%)
Query: 10 LGSQGLEVSAQGLGCMAMSCLYGPPEPE----------PDMIALIHHAINSGITLLDTSD 59
LG GL VS GLG + G P D++AL A + GI L+DT+
Sbjct: 35 LGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLAL---ARDLGINLIDTAP 91
Query: 60 IYGPYTNEILVGKALKGGMRERVELATKFGISFADGGKIRG-DPAYVRACCEASLKRLDI 118
YG +E +G L+G RE + +K G F DG + A+ R E SLKRL+
Sbjct: 92 AYG--RSEERLGPLLRG-QREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLET 148
Query: 119 DCIDLYYQHRVDTKIPI----EV--TIGELKKLVEEGKIKYIGLS 157
D I+L H + I EV T+ LK+ EG I GLS
Sbjct: 149 DRIELVLVHSDGNDLDILENSEVYPTLAALKR---EGLIGAYGLS 190
>pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|B Chain B, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|C Chain C, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|D Chain D, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
Length = 283
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 73/172 (42%), Gaps = 32/172 (18%)
Query: 15 LEVSAQGLGCMAMSCL--------------YGPPEPEPD-MIALIHHAINSGITLLDTSD 59
LE QG G M M+ YG + D ++ + A+ +G +DT+
Sbjct: 12 LEAQTQGPGSMIMTVPTVKLNDGNHIPQLGYGVWQISNDEAVSAVSEALKAGYRHIDTAT 71
Query: 60 IYGPYTNEILVGKALKGG--MRERVELATKFGISFADGGKIRGDPAY--VRACCEASLKR 115
IYG NE VGKA+ G R + L TK S D Y + SLK+
Sbjct: 72 IYG---NEEGVGKAINGSGIARADIFLTTKLWNS---------DQGYESTLKAFDTSLKK 119
Query: 116 LDIDCIDLYYQHR-VDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRR 166
L D +DLY H + +K T KL EEG++K IG+S A + R
Sbjct: 120 LGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLER 171
>pdb|2C91|A Chain A, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|B Chain B, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|C Chain C, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|D Chain D, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|E Chain E, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|F Chain F, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|G Chain G, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|H Chain H, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|I Chain I, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|J Chain J, Mouse Succinic Semialdehyde Reductase, Akr7a5
Length = 338
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 102 PAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACA 161
P +R+ E SLKRL +DL+Y H D P+E T+ +L +EGK +GLS +
Sbjct: 95 PDSIRSQLETSLKRLQCPRVDLFYLHAPDHSTPVEETLCACHQLHQEGKFVELGLSNYAS 154
Query: 162 ------ATIRRAHAVHPITAVQLEWSLWSRDVEAEIVP 193
T+ +++ T Q ++ +R VEAE++P
Sbjct: 155 WEVAEICTLCKSNGWILPTVYQGMYNATTRQVEAELLP 192
>pdb|1SM9|A Chain A, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|B Chain B, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|C Chain C, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|D Chain D, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
Length = 322
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 50/195 (25%)
Query: 1 MAGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDI 60
M+ ++ IKL S L + + G GC ++ + ++ AI +G L D ++
Sbjct: 1 MSASIPDIKLSSGHL-MPSIGFGCWKLANATAGEQ--------VYQAIKAGYRLFDGAED 51
Query: 61 YGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRGDPAYVRACCEASLK 114
YG NE VG +K + RE + L +K ++ D P V +L
Sbjct: 52 YG---NEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHD-------PKNVETALNKTLA 101
Query: 115 RLDIDCIDLYYQH-------------------------RVDTKIPIEVTIGELKKLVEEG 149
L +D +DL+ H V +PI T L+KLV G
Sbjct: 102 DLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAG 161
Query: 150 KIKYIGLSEACAATI 164
KIK IG+S A +
Sbjct: 162 KIKSIGVSNFPGALL 176
>pdb|1YE4|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|B Chain B, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|C Chain C, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|D Chain D, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE6|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|B Chain B, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|C Chain C, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|D Chain D, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
Length = 322
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 50/195 (25%)
Query: 1 MAGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDI 60
M+ ++ IKL S L + + G GC ++ + ++ AI +G L D ++
Sbjct: 1 MSASIPDIKLSSGHL-MPSIGFGCWKLANATAGEQ--------VYQAIKAGYRLFDGAED 51
Query: 61 YGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRGDPAYVRACCEASLK 114
YG NE VG +K + RE + L +K ++ D P V +L
Sbjct: 52 YG---NEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHD-------PKNVETALNKTLA 101
Query: 115 RLDIDCIDLYYQH-------------------------RVDTKIPIEVTIGELKKLVEEG 149
L +D +DL+ H V +PI T L+KLV G
Sbjct: 102 DLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAG 161
Query: 150 KIKYIGLSEACAATI 164
KIK IG+S A +
Sbjct: 162 KIKSIGVSNFPGALL 176
>pdb|1JEZ|A Chain A, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto
Reductase From Candida Tenuis
pdb|1JEZ|B Chain B, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto
Reductase From Candida Tenuis
pdb|1K8C|A Chain A, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|B Chain B, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|C Chain C, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|D Chain D, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1MI3|A Chain A, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|B Chain B, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|C Chain C, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|D Chain D, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
Length = 322
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 77/195 (39%), Gaps = 50/195 (25%)
Query: 1 MAGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDI 60
M+ ++ IKL S L + + G GC ++ + ++ AI +G L D ++
Sbjct: 1 MSASIPDIKLSSGHL-MPSIGFGCWKLANATAGEQ--------VYQAIKAGYRLFDGAED 51
Query: 61 YGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRGDPAYVRACCEASLK 114
YG NE VG +K + RE + L +K ++ D P V +L
Sbjct: 52 YG---NEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHD-------PKNVETALNKTLA 101
Query: 115 RLDIDCIDLYYQH-------------------------RVDTKIPIEVTIGELKKLVEEG 149
L +D +DL+ H V +PI T L+KLV G
Sbjct: 102 DLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAG 161
Query: 150 KIKYIGLSEACAATI 164
KIK IG+S A +
Sbjct: 162 KIKSIGVSNFPGALL 176
>pdb|1QWK|A Chain A, Structural Genomics Of Caenorhabditis Elegans:
Hypothetical 35.2 Kda Protein (Aldose Reductase Family
Member)
Length = 317
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 84/200 (42%), Gaps = 36/200 (18%)
Query: 1 MAGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDI 60
M+ IKL S G+E+ GLG S P E +I + A+ +G L+DT+ +
Sbjct: 1 MSSATASIKL-SNGVEMPVIGLGTWQSS----PAE----VITAVKTAVKAGYRLIDTASV 51
Query: 61 YGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRGDPAYVRACCEASLK 114
Y NE +G A+K + RE + + TK GK+ G SLK
Sbjct: 52 Y---QNEEAIGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEG-------GLRESLK 101
Query: 115 RLDIDCIDLYYQH---------RVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIR 165
+L ++ +DLY H P+E + + + G K +G+S I
Sbjct: 102 KLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQIS 161
Query: 166 RAHA--VHPITAVQLEWSLW 183
RA A + P+ Q+E L+
Sbjct: 162 RALALGLTPVHNSQVELHLY 181
>pdb|1Z9A|A Chain A, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|B Chain B, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|C Chain C, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|D Chain D, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
Length = 321
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 50/194 (25%)
Query: 2 AGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIY 61
+ ++ IKL S L + + G GC ++ + ++ AI +G L D ++ Y
Sbjct: 1 SASIPDIKLSSGHL-MPSIGFGCWKLANATAGEQ--------VYQAIKAGYRLFDGAEDY 51
Query: 62 GPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRGDPAYVRACCEASLKR 115
G NE VG +K + RE + L +K ++ D P V +L
Sbjct: 52 G---NEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHD-------PKNVETALNKTLAD 101
Query: 116 LDIDCIDLYYQH-------------------------RVDTKIPIEVTIGELKKLVEEGK 150
L +D +DL+ H V +PI T L+KLV GK
Sbjct: 102 LKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGK 161
Query: 151 IKYIGLSEACAATI 164
IK IG+S A +
Sbjct: 162 IKSIGVSNFPGALL 175
>pdb|3KRB|A Chain A, Structure Of Aldose Reductase From Giardia Lamblia At
1.75a Resolution
pdb|3KRB|B Chain B, Structure Of Aldose Reductase From Giardia Lamblia At
1.75a Resolution
Length = 334
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 48/179 (26%)
Query: 15 LEVSAQGLGCMAMSCLYG------PPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEI 68
LE QG G M G PPE + + A+ +G +D + +Y NE
Sbjct: 12 LEAQTQGPGSMQYPPRLGFGTWQAPPEA---VQTAVETALMTGYRHIDCAYVY---QNEE 65
Query: 69 LVGKAL--------KGGMRERVELATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDC 120
+G+A G RE V + +K P VR C+ ++ L +D
Sbjct: 66 AIGRAFGKIFKDASSGIKREDVWITSKLW-------NYNHRPELVREQCKKTMSDLQVDY 118
Query: 121 IDLYYQH------RVDT---------------KIPIEVTIGELKKLVEEGKIKYIGLSE 158
+DL+ H R D K+P+ T +++LVEEG +K+IG+S
Sbjct: 119 LDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSN 177
>pdb|1S1P|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase
(Akr1c3) In Complex With The Non-Steroidal Anti-
Inflammatory Drugs Flufenamic Acid And Indomethacin
pdb|1S1R|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase
(Akr1c3) In Complex With The Non-Steroidal Anti-
Inflammatory Drugs Flufenamic Acid And Indomethacin
pdb|1S2A|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase In
Complex With The Non-Steroidal Anti-Inflammatory Drugs
Flufenamic Acid And Indomethacin
pdb|1S2C|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase In
Complex With The Non-Steroidal Anti-Inflammatory Drugs
Flufenamic Acid And Indomethacin
Length = 331
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 23/129 (17%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y PPE P + + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 24 YAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIG-EL 142
+K +F P VR E SLK+ +D +DLY H P+ + G EL
Sbjct: 81 YTSKLWSTF-------HRPELVRPALENSLKKAQLDYVDLYLIHS-----PMSLKPGEEL 128
Query: 143 KKLVEEGKI 151
E GK+
Sbjct: 129 SPTDENGKV 137
>pdb|3UWE|A Chain A, Akr1c3 Complexed With 3-Phenoxybenzoic Acid
Length = 331
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 23/129 (17%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y PPE P + + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 24 YAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIG-EL 142
+K +F P VR E SLK+ +D +DLY H P+ + G EL
Sbjct: 81 YTSKLWSTF-------HRPELVRPALENSLKKAQLDYVDLYLIHS-----PMSLKPGEEL 128
Query: 143 KKLVEEGKI 151
E GK+
Sbjct: 129 SPTDENGKV 137
>pdb|2FVL|A Chain A, Crystal Structure Of Human 3-alpha
Hydroxysteroid/dihydrodiol Dehydrogenase (akr1c4)
Complexed With Nadp+
pdb|2FVL|B Chain B, Crystal Structure Of Human 3-alpha
Hydroxysteroid/dihydrodiol Dehydrogenase (akr1c4)
Complexed With Nadp+
pdb|2FVL|C Chain C, Crystal Structure Of Human 3-alpha
Hydroxysteroid/dihydrodiol Dehydrogenase (akr1c4)
Complexed With Nadp+
Length = 324
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 29/148 (19%)
Query: 1 MAGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPE-PEPDMIALIHHAINSGITLLDTSD 59
M +R++L G + G G Y PPE P + + AI +G +D++
Sbjct: 2 MDPKYQRVELND-GHFMPVLGFGT------YAPPEVPRNRAVEVTKLAIEAGFRHIDSAY 54
Query: 60 IYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRGDPAYVRACCEASL 113
+Y NE VG A++ + RE + +K +F P V+ E+SL
Sbjct: 55 LYN---NEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQ-------PQMVQPALESSL 104
Query: 114 KRLDIDCIDLYYQHRVDTKIPIEVTIGE 141
K+L +D +DLY H P+ + GE
Sbjct: 105 KKLQLDYVDLYLLH-----FPMALKPGE 127
>pdb|3R43|A Chain A, Akr1c3 Complexed With Mefenamic Acid
pdb|3R58|A Chain A, Akr1c3 Complex With Naproxen
pdb|3R6I|A Chain A, Akr1c3 Complex With Meclofenamic Acid
pdb|3R7M|A Chain A, Akr1c3 Complex With Sulindac
pdb|3R8G|A Chain A, Akr1c3 Complex With Ibuprofen
pdb|3R8H|A Chain A, Akr1c3 Complex With Zomepirac
pdb|3R94|A Chain A, Akr1c3 Complex With Flurbiprofen
pdb|3UFY|A Chain A, Akr1c3 Complex With R-Naproxen
pdb|3UG8|A Chain A, Akr1c3 Complex With Indomethacin At Ph 7.5
pdb|3UGR|A Chain A, Akr1c3 Complex With Indomethacin At Ph 6.8
pdb|4FA3|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 In Complex With
(R)-1-(Naphthalen-2-Ylsulfonyl)piperidine-3- Carboxylic
Acid (86)
pdb|4FAL|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 In Complex With
3-((3,4-Dihydroisoquinolin-2(1h)-Yl)sulfonyl)-N-
Methylbenzamide (80)
pdb|4FAM|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 In Complex With
3-((3,4-Dihydroisoquinolin-2(1h)-Yl)sulfonyl)benzoic
Acid (17)
pdb|4FAM|B Chain B, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 In Complex With
3-((3,4-Dihydroisoquinolin-2(1h)-Yl)sulfonyl)benzoic
Acid (17)
Length = 331
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 23/129 (17%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y PPE P + + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 24 YAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIG-EL 142
+K +F P VR E SLK+ +D +DLY H P+ + G EL
Sbjct: 81 YTSKLWSTF-------HRPELVRPALENSLKKAQLDYVDLYLIHS-----PMSLKPGEEL 128
Query: 143 KKLVEEGKI 151
E GK+
Sbjct: 129 SPTDENGKV 137
>pdb|1RY0|A Chain A, Structure Of Prostaglandin F Synthase With Prostaglandin
D2
pdb|1RY0|B Chain B, Structure Of Prostaglandin F Synthase With Prostaglandin
D2
pdb|1RY8|A Chain A, Prostaglandin F Synthase Complexed With Nadph And Rutin
pdb|1RY8|B Chain B, Prostaglandin F Synthase Complexed With Nadph And Rutin
pdb|1XF0|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) Complexed With Delta4-
Androstene-3,17-Dione And Nadp
pdb|2F38|A Chain A, Crystal Structure Of Prostaglandin F Synathase Containing
Bimatoprost
pdb|1ZQ5|A Chain A, Crystal Structure Of Human Androgenic
17beta-Hydroxysteroid Dehydrogenase Type 5 In Complexed
With A Potent Inhibitor Em1404
pdb|2FGB|A Chain A, Crystal Structure Of Human 17bet A-Hydroxysteroid
Dehydrogenase Type 5 In Complexes With Peg And Nadp
pdb|4DBS|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) In Complex With Nadp+ And
3'-[(4-Nitronaphthalen-1-Yl) Amino]benzoic Acid
pdb|4DBS|B Chain B, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) In Complex With Nadp+ And
3'-[(4-Nitronaphthalen-1-Yl) Amino]benzoic Acid
pdb|4DBU|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) In Complex With Nadp+ And
3-((4 -(Trifluoromethyl)phenyl) Amino)benzoic Acid
pdb|4DBU|B Chain B, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) In Complex With Nadp+ And
3-((4 -(Trifluoromethyl)phenyl) Amino)benzoic Acid
Length = 323
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 23/129 (17%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y PPE P + + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 24 YAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIG-EL 142
+K +F P VR E SLK+ +D +DLY H P+ + G EL
Sbjct: 81 YTSKLWSTF-------HRPELVRPALENSLKKAQLDYVDLYLIHS-----PMSLKPGEEL 128
Query: 143 KKLVEEGKI 151
E GK+
Sbjct: 129 SPTDENGKV 137
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZM|B Chain B, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|A Chain A, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|B Chain B, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
Length = 283
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 44 IHHAINSGITLLDTSDIYGPYTNEILVGKALKGGMRERVELATKFGISFADGGKIRGDPA 103
+ A+ +G L+DT+ YG NE VG+A+ R E+ ++ D G
Sbjct: 41 VSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRDEIYVTTKLATPDQGFTSS--- 94
Query: 104 YVRACCEASLKRLDIDCIDLYYQHRV--DTKIPIEVTIGELKKLVEEGKIKYIGL 156
+A ASL+RL +D +DLY H DT ++ + G L K+ E+G + IG+
Sbjct: 95 --QAAARASLERLGLDYVDLYLIHWPGGDTSKYVD-SWGGLMKVKEDGIARSIGV 146
>pdb|1VP5|A Chain A, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase
(tm1009) From Thermotoga Maritima At 2.40 A Resolution
pdb|1VP5|B Chain B, Crystal Structure Of 2,5-diketo-d-gluconic Acid Reductase
(tm1009) From Thermotoga Maritima At 2.40 A Resolution
Length = 298
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 28/125 (22%)
Query: 12 SQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVG 71
+ G+E+ G G + PPE + ++ AI G L+DT+ Y NE VG
Sbjct: 21 NNGVEMPILGYGVFQI-----PPEKTEE---CVYEAIKVGYRLIDTA---ASYMNEEGVG 69
Query: 72 KALKGGM------RERVELATKFGISFADGGKIRGDPAY--VRACCEASLKRLDIDCIDL 123
+A+K + RE + + TK +S D Y + E SLK+L ++ IDL
Sbjct: 70 RAIKRAIDEGIVRREELFVTTKLWVS---------DVGYESTKKAFEKSLKKLQLEYIDL 120
Query: 124 YYQHR 128
Y H+
Sbjct: 121 YLIHQ 125
>pdb|1MZR|A Chain A, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved
By Molecular Replacement
pdb|1MZR|B Chain B, Structure Of Dkga From E.Coli At 2.13 A Resolution Solved
By Molecular Replacement
Length = 296
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Query: 39 DMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGMRERVELATKFGISFADGGKI 98
++I I A+ G +DT+ Y NE VGKALK R EL F
Sbjct: 50 EVITAIQKALEVGYRSIDTA---AAYKNEEGVGKALKNASVNREEL-------FITTKLW 99
Query: 99 RGDPAYVRACCEASLKRLDIDCIDLYYQHR----VDTKIPIEVTIGELKKLVEEGKIKYI 154
D R SLK+L +D IDLY H +D + + EL+K EG IK I
Sbjct: 100 NDDHKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQK---EGLIKSI 156
Query: 155 GL 156
G+
Sbjct: 157 GV 158
>pdb|1IHI|A Chain A, Crystal Structure Of Human Type Iii 3-Alpha-Hydroxysteroid
DehydrogenaseBILE ACID BINDING PROTEIN (AKR1C2)
COMPLEXED With Nadp+ And Ursodeoxycholate
pdb|1IHI|B Chain B, Crystal Structure Of Human Type Iii 3-Alpha-Hydroxysteroid
DehydrogenaseBILE ACID BINDING PROTEIN (AKR1C2)
COMPLEXED With Nadp+ And Ursodeoxycholate
pdb|2HDJ|A Chain A, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid
Dehydrogenase In Complex With Nadp(H)
pdb|2HDJ|B Chain B, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid
Dehydrogenase In Complex With Nadp(H)
Length = 323
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 22/118 (18%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y P E P+ + + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 24 YAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGE 141
+K +++ + P VR E SLK L +D +DLY H P+ V GE
Sbjct: 81 YTSKL---WSNSHR----PELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|1XJB|A Chain A, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid
Dehydrogenase In Complex With Nadp(H), Citrate And
Acetate Molecules
pdb|1XJB|B Chain B, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid
Dehydrogenase In Complex With Nadp(H), Citrate And
Acetate Molecules
Length = 325
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 22/118 (18%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y P E P+ + + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 26 YAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYN---NEEQVGLAIRSKIADGSVKREDIF 82
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGE 141
+K +++ + P VR E SLK L +D +DLY H P+ V GE
Sbjct: 83 YTSKL---WSNSHR----PELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 128
>pdb|1J96|A Chain A, Human 3alpha-Hsd Type 3 In Ternary Complex With Nadp And
Testosterone
pdb|1J96|B Chain B, Human 3alpha-Hsd Type 3 In Ternary Complex With Nadp And
Testosterone
Length = 323
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGMRE-RVELATKF 88
Y P E P+ + + AI +G +D++ +Y NE VG A++ + + V+ F
Sbjct: 24 YAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 89 GISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGE 141
S R P VR E SLK L +D +DLY H P+ V GE
Sbjct: 81 YTSKLWSNSHR--PELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase
(akr1a4) In Its Apo-form
pdb|4GAC|B Chain B, High Resolution Structure Of Mouse Aldehyde Reductase
(akr1a4) In Its Apo-form
Length = 324
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 37/155 (23%)
Query: 37 EPDMI-ALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM-------RERVELATKF 88
EP + A I HA+++G +D + +YG NE +G+ALK + RE + + +K
Sbjct: 24 EPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAVPREELFVTSKL 80
Query: 89 GISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQH------RVDTKIPIEV----- 137
+ P V +L L ++ +DLY H R D P
Sbjct: 81 -------WNTKHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVR 133
Query: 138 --------TIGELKKLVEEGKIKYIGLSEACAATI 164
T L+ LV +G +K +GLS + I
Sbjct: 134 YDSTHYKETWKALEVLVAKGLVKALGLSNFNSRQI 168
>pdb|1MRQ|A Chain A, Crystal Structure Of Human 20alpha-hsd In Ternary Complex
With Nadp And 20alpha-hydroxy-progesterone
Length = 323
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y P E P+ + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 24 YAPAEVPKSKALEATKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGE 141
+K + P VR E SLK L +D +DLY H P+ V GE
Sbjct: 81 YTSKLWCN-------SHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|3C3U|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And 3,5-
Dichlorosalicylic Acid
pdb|3NTY|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And
5-Phenyl,3- Chlorosalicylic Acid
Length = 323
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y P E P+ + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 24 YAPAEVPKSKALEATKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGE 141
+K + P VR E SLK L +D +DLY H P+ V GE
Sbjct: 81 YTSKLWCN-------SHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|3GUG|A Chain A, Crystal Structure Of Akr1c1 L308v Mutant In Complex With
Nadp And 3,5-Dichlorosalicylic Acid
Length = 323
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 22/118 (18%)
Query: 31 YGPPE-PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVE 83
Y P E P+ + AI +G +D++ +Y NE VG A++ + RE +
Sbjct: 24 YAPAEVPKSKALEATKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIF 80
Query: 84 LATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGE 141
+K + P VR E SLK L +D +DLY H P+ V GE
Sbjct: 81 YTSKLWCN-------SHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|1Q13|A Chain A, Crystal Structure Of Rabbit 20alpha Hyroxysteroid
Dehydrogenase In Ternary Complex With Nadp And
Testosterone
pdb|1Q13|B Chain B, Crystal Structure Of Rabbit 20alpha Hyroxysteroid
Dehydrogenase In Ternary Complex With Nadp And
Testosterone
Length = 323
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 24/134 (17%)
Query: 1 MAGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPE-PEPDMIALIHHAINSGITLLDTSD 59
M +R+ L S G + G G Y P E P+ + AI++G +D++
Sbjct: 1 MDPKFQRVAL-SDGHFIPVLGFGT------YAPEEVPKSKAMEATKIAIDAGFRHIDSAY 53
Query: 60 IYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRGDPAYVRACCEASL 113
Y NE VG A++ + RE + +K +F P VR E SL
Sbjct: 54 FY---KNEKEVGLAIRSKIADGTVKREDIFYTSKLWCTF-------HRPELVRPSLEDSL 103
Query: 114 KRLDIDCIDLYYQH 127
K L +D +DLY H
Sbjct: 104 KNLQLDYVDLYIIH 117
>pdb|2IPJ|A Chain A, Crystal Structure Of H3alpha-Hydroxysteroid Dehydrogenase
Type 3 Mutant Y24a In Complex With Nadp+ And
Epi-Testosterone
pdb|2IPJ|B Chain B, Crystal Structure Of H3alpha-Hydroxysteroid Dehydrogenase
Type 3 Mutant Y24a In Complex With Nadp+ And
Epi-Testosterone
Length = 321
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 21/112 (18%)
Query: 36 PEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVELATKFG 89
P+ + + AI +G +D++ +Y NE VG A++ + RE + +K
Sbjct: 28 PKSKALEAVKLAIEAGFHHIDSAHVYN---NEEQVGLAIRSKIADGSVKREDIFYTSKL- 83
Query: 90 ISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGE 141
+++ + P VR E SLK L +D +DLY H P+ V GE
Sbjct: 84 --WSNSHR----PELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 124
>pdb|1Q5M|A Chain A, Binary Complex Of Rabbit 20alpha-Hydroxysteroid
Dehydrogenase With Nadph
pdb|1Q5M|B Chain B, Binary Complex Of Rabbit 20alpha-Hydroxysteroid
Dehydrogenase With Nadph
Length = 322
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 24/130 (18%)
Query: 5 VKRIKLGSQGLEVSAQGLGCMAMSCLYGPPE-PEPDMIALIHHAINSGITLLDTSDIYGP 63
+R+ L S G + G G Y P E P+ + AI++G +D++ Y
Sbjct: 4 FQRVAL-SDGHFIPVLGFGT------YAPEEVPKSKAMEATKIAIDAGFRHIDSAYFY-- 54
Query: 64 YTNEILVGKALKGGM------RERVELATKFGISFADGGKIRGDPAYVRACCEASLKRLD 117
NE VG A++ + RE + +K +F P VR E SLK L
Sbjct: 55 -KNEKEVGLAIRSKIADGTVKREDIFYTSKLWCTF-------HRPELVRPSLEDSLKNLQ 106
Query: 118 IDCIDLYYQH 127
+D +DLY H
Sbjct: 107 LDYVDLYIIH 116
>pdb|1VBJ|A Chain A, The Crystal Structure Of Prostaglandin F Synthase From
Trypanosoma Brucei
pdb|1VBJ|B Chain B, The Crystal Structure Of Prostaglandin F Synthase From
Trypanosoma Brucei
Length = 281
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Query: 47 AINSGITLLDTSDIYGPYTNEILVGKALK--GGMRERVELATKFGISFADGGKIRGDPAY 104
AI SG +DT+ IY NE G+A+ G RE + + TK S D Y
Sbjct: 43 AIKSGYRHIDTAAIY---KNEESAGRAIASCGVPREELFVTTKLWNS---------DQGY 90
Query: 105 --VRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSE 158
+ E S+K+L ++ +DLY H I+ T +KL + K++ IG+S
Sbjct: 91 ESTLSAFEKSIKKLGLEYVDLYLIHWPGKDKFID-TWKAFEKLYADKKVRAIGVSN 145
>pdb|3H7U|A Chain A, Crystal Structure Of The Plant Stress-Response Enzyme
Akr4c9
Length = 335
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 29/173 (16%)
Query: 1 MAGTVKRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIA-LIHHAINSGITLLDTSD 59
MA + KL + G + + GLG S P ++ + A+ G +D +
Sbjct: 21 MANAITFFKLNT-GAKFPSVGLGTWQAS---------PGLVGDAVAAAVKIGYRHIDCAQ 70
Query: 60 IYGPYTNEILVGKALKGGMRERVELATKFGISFADGGKIRGDPAYVRACCEASLKRLDID 119
IYG NE +G LK +RV I+ + DP V +LK L ++
Sbjct: 71 IYG---NEKEIGAVLKKLFEDRVVKREDLFIT-SKLWCTDHDPQDVPEALNRTLKDLQLE 126
Query: 120 CIDLYYQH------------RVDTKIPIEV--TIGELKKLVEEGKIKYIGLSE 158
+DLY H + + +P+++ T ++ L + GK + IG+S
Sbjct: 127 YVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSN 179
>pdb|3CV6|A Chain A, The Crystal Structure Of Mouse 17-Alpha Hydroxysteroid
Dehydrogenase Gg225.226pp Mutant In Complex With
Inhibitor And Cofactor Nadp+.
pdb|3CV6|B Chain B, The Crystal Structure Of Mouse 17-Alpha Hydroxysteroid
Dehydrogenase Gg225.226pp Mutant In Complex With
Inhibitor And Cofactor Nadp+
Length = 323
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 47 AINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRG 100
AI++G D++ +Y E VG+A++ + RE + +K +
Sbjct: 41 AIDAGFHHFDSASVYN---TEDHVGEAIRSKIADGTVRREDIFYTSKVWCT-------SL 90
Query: 101 DPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEE-GKIKY 153
P VRA E SL++L D +DLY H P+ + GE V+E GK+ +
Sbjct: 91 HPELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKLIF 139
>pdb|2IPG|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
Mutant K31a In Complex With Nadp+ And Epi-Testosterone
pdb|2IPG|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
Mutant K31a In Complex With Nadp+ And Epi-Testosterone
Length = 319
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 47 AINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRG 100
AI++G D++ +Y E VG+A++ + RE + +K +
Sbjct: 37 AIDAGFHHFDSASVY---NTEDHVGEAIRSKIADGTVRREDIFYTSKVWCT-------SL 86
Query: 101 DPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEE-GKIKY 153
P VRA E SL++L D +DLY H P+ + GE V+E GK+ +
Sbjct: 87 HPELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKLIF 135
>pdb|2IPF|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Complex With Nadp+ And Epi-Testosterone
pdb|2IPF|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Complex With Nadp+ And Epi-Testosterone
Length = 318
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 47 AINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRG 100
AI++G D++ +Y E VG+A++ + RE + +K +
Sbjct: 36 AIDAGFHHFDSASVY---NTEDHVGEAIRSKIADGTVRREDIFYTSKVWCT-------SL 85
Query: 101 DPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEE-GKIKY 153
P VRA E SL++L D +DLY H P+ + GE V+E GK+ +
Sbjct: 86 HPELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKLIF 134
>pdb|3FJN|A Chain A, The Crystal Structure Of 17-Alpha Hydroxysteroid
Dehydrogenase Y224d Mutant.
pdb|3FJN|B Chain B, The Crystal Structure Of 17-Alpha Hydroxysteroid
Dehydrogenase Y224d Mutant
Length = 323
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 47 AINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRG 100
AI++G D++ +Y E VG+A++ + RE + +K +
Sbjct: 41 AIDAGFHHFDSASVY---NTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLH------ 91
Query: 101 DPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEE-GKIKY 153
P VRA E SL++L D +DLY H P+ + GE V+E GK+ +
Sbjct: 92 -PELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKLIF 139
>pdb|2HE5|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Binary Complex With Nadp(H) In An Open Conformation
pdb|2HE5|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Binary Complex With Nadp(H) In An Open Conformation
pdb|2HE5|C Chain C, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Binary Complex With Nadp(H) In An Open Conformation
pdb|2HE5|D Chain D, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Binary Complex With Nadp(H) In An Open Conformation
pdb|2HE8|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Its Apo- Form
pdb|2HE8|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Its Apo- Form
pdb|2HEJ|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Complex With Nadp(H) In A Closed Conformation
pdb|2HEJ|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Complex With Nadp(H) In A Closed Conformation
pdb|2P5N|A Chain A, Crystal Structure Of Mouse 17-Alpha Hydroxysteroid
Dehydrogenase In Complex With Coenzyme Nadph
pdb|2P5N|B Chain B, Crystal Structure Of Mouse 17-Alpha Hydroxysteroid
Dehydrogenase In Complex With Coenzyme Nadph
Length = 323
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 22/114 (19%)
Query: 47 AINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRG 100
AI++G D++ +Y E VG+A++ + RE + +K +
Sbjct: 41 AIDAGFHHFDSASVY---NTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTSLH------ 91
Query: 101 DPAYVRACCEASLKRLDIDCIDLYYQHRVDTKIPIEVTIGELKKLVEE-GKIKY 153
P VRA E SL++L D +DLY H P+ + GE V+E GK+ +
Sbjct: 92 -PELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKLIF 139
>pdb|1RAL|A Chain A, Three-Dimensional Structure Of Rat Liver 3alpha-
Hydroxysteroid(Slash)dihydrodiol Dehydrogenase: A Member
Of The Aldo-Keto Reductase Superfamily
Length = 308
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 20/107 (18%)
Query: 31 YGPPEPEP----DMIALIHHAINSGITLLDTSDIYGPYTNEILVGKALKGGM------RE 80
+G PE ++I AI++G D++ +Y E VG+A++ + RE
Sbjct: 21 FGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEV---EEEVGQAIRSKIEDGTVKRE 77
Query: 81 RVELATKFGISFADGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQH 127
+ +K +F P VR C E +LK +D +DLY H
Sbjct: 78 DIFYTSKLWSTF-------HRPELVRTCLEKTLKSTQLDYVDLYIIH 117
>pdb|1LWI|A Chain A, 3-Alpha-HydroxysteroidDIHYDRODIOL DEHYDROGENASE FROM
Rattus Norvegicus
pdb|1LWI|B Chain B, 3-Alpha-HydroxysteroidDIHYDRODIOL DEHYDROGENASE FROM
Rattus Norvegicus
Length = 322
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Query: 47 AINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRG 100
AI++G D++ +Y E VG+A++ + RE + +K +F
Sbjct: 41 AIDNGFRHFDSAYLYEV---EEEVGQAIRSKIEDGTVKREDIFYTSKLWSTF-------H 90
Query: 101 DPAYVRACCEASLKRLDIDCIDLYYQH 127
P VR C E +LK +D +DLY H
Sbjct: 91 RPELVRTCLEKTLKSTQLDYVDLYIIH 117
>pdb|1AFS|A Chain A, Recombinant Rat Liver 3-Alpha-Hydroxysteroid Dehydrogenase
(3-Alpha-Hsd) Complexed With Nadp And Testosterone
pdb|1AFS|B Chain B, Recombinant Rat Liver 3-Alpha-Hydroxysteroid Dehydrogenase
(3-Alpha-Hsd) Complexed With Nadp And Testosterone
Length = 323
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Query: 47 AINSGITLLDTSDIYGPYTNEILVGKALKGGM------RERVELATKFGISFADGGKIRG 100
AI++G D++ +Y E VG+A++ + RE + +K +F
Sbjct: 41 AIDNGFRHFDSAYLYEV---EEEVGQAIRSKIEDGTVKREDIFYTSKLWSTF-------H 90
Query: 101 DPAYVRACCEASLKRLDIDCIDLYYQH 127
P VR C E +LK +D +DLY H
Sbjct: 91 RPELVRTCLEKTLKSTQLDYVDLYIIH 117
>pdb|3B3D|A Chain A, B.Subtilis Ytbe
pdb|3B3D|B Chain B, B.Subtilis Ytbe
pdb|3B3D|C Chain C, B.Subtilis Ytbe
Length = 314
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 71/155 (45%), Gaps = 32/155 (20%)
Query: 13 QGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIHHAINSGITLLDTSDIYGPYTNEILVGK 72
G+E+ GLG + E +++ + AI G +DT+ IYG NE VG+
Sbjct: 47 NGVEMPWFGLGVFQV-------EEGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGE 96
Query: 73 ALKGGMRERVELATKFGIS----FADGGKIRGDPAY--VRACCEASLKRLDIDCIDLYYQ 126
G+RE +E A GIS F D Y A E SL +L +D +DLY
Sbjct: 97 ----GIREGIEEA---GISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLI 149
Query: 127 HRVDTKIPIEVTIGE----LKKLVEEGKIKYIGLS 157
H P+E E L+ L +EG+IK IG+S
Sbjct: 150 H-----WPVEGKYKEAWRALETLYKEGRIKAIGVS 179
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 116 LDIDCIDLYYQHRVD-TKIPIEVTIGELKKLVEEGKI 151
+D+ +LY+Q VD T++P++ LKK +EEG +
Sbjct: 11 VDLGTENLYFQSMVDATRVPMDERFRTLKKKLEEGMV 47
>pdb|3A5C|D Chain D, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5C|E Chain E, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5C|F Chain F, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5C|L Chain L, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5C|M Chain M, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5C|N Chain N, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5D|D Chain D, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5D|E Chain E, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5D|F Chain F, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5D|L Chain L, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5D|M Chain M, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3A5D|N Chain N, Inter-Subunit Interaction And Quaternary Rearrangement
Defined By The Central Stalk Of Prokaryotic V1-Atpase
pdb|3J0J|D Chain D, Fitted Atomic Models Of Thermus Thermophilus V-Atpase
Subunits Into Cryo-Em Map
pdb|3J0J|E Chain E, Fitted Atomic Models Of Thermus Thermophilus V-Atpase
Subunits Into Cryo-Em Map
pdb|3J0J|F Chain F, Fitted Atomic Models Of Thermus Thermophilus V-Atpase
Subunits Into Cryo-Em Map
Length = 478
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 20/121 (16%)
Query: 30 LYGPPEPEPDMIALIHHAINSGITLLD----TSDIYGPYTNEILVGK--------ALKGG 77
+Y P +P P + L+++ + G T D + +Y Y N + + K AL
Sbjct: 348 IYPPIDPLPSLSRLMNNGVGKGKTREDHKQVSDQLYSAYANGVDIRKLVAIIGEDALTEN 407
Query: 78 MRERVELATKFGISFADGGK--------IRGDPAYVRACCEASLKRLDIDCIDLYYQHRV 129
R ++ A F F + G+ ++ A + + LKR+ D I YY ++
Sbjct: 408 DRRYLQFADAFERFFINQGQQNRSIEESLQIAWALLSMLPQGELKRISKDHIGKYYGQKL 467
Query: 130 D 130
+
Sbjct: 468 E 468
>pdb|2LV4|A Chain A, Zirs C-Terminal Domain
Length = 146
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 61 YGPYTNEILVGK-----ALKGGMRERVELATKFGISFADGGKIRG 100
YGP E + GK +G ER++++ K+ +SF IRG
Sbjct: 100 YGPLKKENVPGKYTQVITYRGHSNERIDISFKYAMSFTKEISIRG 144
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|B Chain B, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|C Chain C, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|D Chain D, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|2AMV|A Chain A, The Structure Of Glycogen Phosphorylase B With An Alkyl-
Dihydropyridine-Dicarboxylic Acid
pdb|1E1Y|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1UZU|A Chain A, Glycogen Phosphorylase B In Complex With Indirubin-5'-
Sulphonate
pdb|1XC7|A Chain A, Binding Of Beta-D-Glucopyranosyl Bismethoxyphosphoramidate
To Glycogen Phosphorylase B: Kinetic And
Crystallographic Studies
pdb|1XKX|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1XL0|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1XL1|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1Z62|A Chain A, Indirubin-3'-aminooxy-acetate Inhibits Glycogen
Phosphorylase By Binding At The Inhibitor And The
Allosteric Site. Broad Specificities Of The Two Sites
pdb|2F3P|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
N-(Beta-D- Glucopyranosyl)oxamic Acid Complex
pdb|2F3Q|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
METHYL-N-(Beta-D- Glucopyranosyl)oxamate Complex
pdb|2F3S|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
ETHYL-N- (Beta-D-Glucopyranosyl)oxamate Complex
pdb|2F3U|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
N-(Beta-D- Glucopyranosyl)-N'-Cyclopropyl Oxalamide
Complex
pdb|2FET|A Chain A, Synthesis Of C-D-Glycopyranosyl-Hydroquinones
And-Benzoquinones. Inhibition Of Ptp1b. Inhibition Of
And Binding To Glycogen Phosphorylase In The Crystal
pdb|2FF5|A Chain A, Synthesis Of C-D-Glycopyranosyl-Hydroquinones
And-Benzoquinones. Inhibition Of Ptp1b. Inhibition Of
And Binding To Glycogen Phosphorylase In The Crystal
pdb|1AXR|A Chain A, Cooperativity Between Hydrogen-Bonding And Charge-Dipole
Interactions In The Inhibition Of Beta-Glycosidases By
Azolopyridines: Evidence From A Study With Glycogen
Phosphorylase B
pdb|1GPY|A Chain A, Crystallographic Binding Studies On The Allosteric
Inhibitor Glucose- 6-Phosphate To T State Glycogen
Phosphorylase B
pdb|3BD7|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Thymine
pdb|3BD8|A Chain A, Glucogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Cytosine
pdb|3BDA|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Cyanuric Acid
Length = 842
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 406 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 461
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|B Chain B, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|C Chain C, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|D Chain D, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|9GPB|A Chain A, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|B Chain B, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|C Chain C, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|D Chain D, The Allosteric Transition Of Glycogen Phosphorylase
pdb|1B4D|A Chain A, Amidocarbamate Inhibitor Of Glycogen Phosphorylase
pdb|1BX3|A Chain A, Effects Of Commonly Used Cryoprotectants On Glycogen
Phosphorylase Activity And Structure
pdb|2PRI|A Chain A, Binding Of 2-Deoxy-Glucose-6-Phosphate To Glycogen
Phosphorylase B
pdb|2PRJ|A Chain A, Binding Of N-Acetyl-Beta-D-Glucopyranosylamine To Glycogen
Phosphorylase B
pdb|2SKC|A Chain A, Pyridoxal Phosphorylase B In Complex With Fluorophosphate,
Glucose And Inosine-5'-Monophosphate
pdb|2SKD|A Chain A, Pyridoxal Phosphorylase B In Complex With Phosphate,
Glucose And Inosine-5'-Monophosphate
pdb|2SKE|A Chain A, Pyridoxal Phosphorylase B In Complex With Phosphite,
Glucose And Inosine-5'-monophosphate
pdb|1C8K|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1GFZ|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1GG8|A Chain A, Design Of Inhibitors Of Glycogen Phosphorylase: A Study Of
Alpha-And Beta-C-Glucosides And 1-Thio-Beta-D-Glucose
Compounds
pdb|1FS4|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTQ|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTW|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTY|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU4|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU7|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU8|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1GGN|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1HLF|A Chain A, Binding Of Glucopyranosylidene-Spiro-Thiohydantoin To
Glycogen Phosphorylase B: Kinetic And Crystallographic
Stud
pdb|1H5U|A Chain A, The 1.76 A Resolution Crystal Structure Of Glycogen
Phosphorylase B Complexed With Glucose And Cp320626, A
Potential Antidiabetic Drug
pdb|1K06|A Chain A, Crystallographic Binding Study Of 100 Mm
N-Benzoyl-N'-Beta-D- Glucopyranosyl Urea To Glycogen
Phosphorylase B
pdb|1K08|A Chain A, Crystallographic Binding Study Of 10 Mm
N-Benzoyl-N'-Beta-D- Glucopyranosyl Urea To Glycogen
Phosphorylase B
pdb|1KTI|A Chain A, Binding Of 100 Mm N-Acetyl-N'-Beta-D-Glucopyranosyl Urea
To Glycogen Phosphorylase B: Kinetic And
Crystallographic Studies
pdb|1P29|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Maltopentaose
pdb|1P2B|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Maltoheptaose
pdb|1P2D|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Beta Cyclodextrin
pdb|1P2G|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Gamma Cyclodextrin
pdb|1P4G|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Azido-Alpha-D-Glucopyranosyl)formamide
pdb|1P4H|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Acetamido-alpha-d-glucopyranosyl) Formamide
pdb|1P4J|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Hydroxy-Beta-D-Glucopyranosyl)formamide
pdb|1WUT|A Chain A, Acyl Ureas As Human Liver Glycogen Phosphorylase
Inhibitors For The Treatment Of Type 2 Diabetes
pdb|1WUY|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogen Phosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WV0|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogen Phosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WV1|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogenphosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WW2|A Chain A, Crystallographic Studies On Two Bioisosteric Analogues,
N-Acetyl-Beta- D-Glucopyranosylamine And
N-Trifluoroacetyl-Beta-D- Glucopyranosylamine, Potent
Inhibitors Of Muscle Glycogen Phosphorylase
pdb|1WW3|A Chain A, Crystallographic Studies On Two Bioisosteric Analogues,
N-Acetyl-Beta- D-Glucopyranosylamine And
N-Trifluoroacetyl-Beta-D- Glucopyranosylamine, Potent
Inhibitors Of Muscle Glycogen Phosphorylase
pdb|2IEG|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEG|B Chain B, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEI|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEI|B Chain B, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|1GPB|A Chain A, Glycogen Phosphorylase B: Description Of The Protein
Structure
pdb|2GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|3GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|4GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|5GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|6GPB|A Chain A, Refined Crystal Structure Of The Phosphorylase-Heptulose
2-Phosphate- Oligosaccharide-Amp Complex
pdb|8GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|2QN7|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-Hydroxybenzoyl-N'-4-Beta- D-Glucopyranosyl Urea
pdb|2QN8|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-nitrobenzoyl-n'-beta-d- Glucopyranosyl Urea
pdb|2QN9|A Chain A, Glycogen Phosphorylase In Complex With
N-4-Aminobenzoyl-N'-Beta-D- Glucopyranosyl Urea
Length = 842
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 406 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 461
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel
Allosteric Binding Site Of Glycogen Phosphorylase B
Length = 830
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 394 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 449
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug And Caffeine
pdb|1LWN|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
A In Complex With A Potential Hypoglycaemic Drug At 2.0
A Resolution
pdb|1LWO|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
A In Complex With A Potential Hypoglycaemic Drug At 2.0
A Resolution
pdb|3AMV|A Chain A, Allosteric Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug
pdb|2GPA|A Chain A, Allosteric Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug
Length = 842
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 406 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 461
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex
pdb|1Z6Q|A Chain A, Glycogen Phosphorylase With Inhibitor In The Amp Site
pdb|1A8I|A Chain A, Spirohydantoin Inhibitor Of Glycogen Phosphorylase
pdb|2GPN|A Chain A, 100 K Structure Of Glycogen Phosphorylase At 2.0 Angstroms
Resolution
pdb|3E3O|A Chain A, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|B Chain B, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|C Chain C, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|D Chain D, Glycogen Phosphorylase R State-Imp Complex
Length = 842
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 406 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 461
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|B Chain B, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|C Chain C, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|D Chain D, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOJ|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
State
pdb|1NOK|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
State
Length = 842
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 406 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 461
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10
pdb|4EKE|A Chain A, Crystal Structure Of Gpb In Complex With Dk11
pdb|4EKY|A Chain A, Crystal Structure Of Gpb In Complex With Dk15
pdb|4EL0|A Chain A, Crystal Structure Of Gpb In Complex With Dk16
pdb|4EL5|A Chain A, Crystal Structure Of Gpb In Complex With Dk12
Length = 825
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 395 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 450
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone
Derivatives To Glycogen Phosphorylase: A New Class Of
Inhibitors
Length = 841
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 405 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 460
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|B Chain B, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|C Chain C, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|D Chain D, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
Length = 842
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 406 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 461
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With Glucose At 100 K
pdb|2PYI|A Chain A, Crystal Structure Of Glycogen Phosphorylase In Complex
With Glucosyl Triazoleacetamide
pdb|3L79|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk1 Complex
pdb|3L7A|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk2 Complex
pdb|3L7B|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk3 Complex
pdb|3L7C|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk4 Complex
pdb|3L7D|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk5 Complex
Length = 843
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 407 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 462
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In
Complex With Thienopyrrole
Length = 825
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 395 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 450
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In
Complex With Ligand
Length = 824
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 395 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 450
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab
Complex
pdb|2G9R|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With (3r,
4r,5r)-5-Hydroxymethyl-1-(3-Phenylpropyl)-Piperidine-3,
4-Diol
pdb|2G9U|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With (3r,
4r,5r)-5-Hydroxymethyl-1-(3-Phenylpropyl)-Piperidine-3,
4-Diol And Phosphate
pdb|2G9V|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With (3r, 4r,5r)-5-Hydroxymethylpiperidine-3,4-Diol And
Phosphate
pdb|2OFF|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With A Potent Allosteric Inhibitor
pdb|2QN1|A Chain A, Glycogen Phosphorylase B In Complex With Asiatic Acid
pdb|2QN2|A Chain A, Glycogen Phosphorylase B In Complex With Maslinic Acid
pdb|2QLM|A Chain A, Glycogen Phosphorylase In Complex With Fn67
pdb|2QLN|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-Phenylbenzoyl- N'-Beta-D-Glucopyranosyl Urea
pdb|2QN3|A Chain A, Glycogen Phosphorylase In Complex With
N-4-Chlorobenzoyl-N- Beta-D-Glucopyranosyl Urea
pdb|2QNB|A Chain A, Glycogen Phosphorylase B In Complex With
N-Benzoyl-N'-Beta- D-Glucopyranosyl Urea
pdb|2QRM|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Nitrophenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,
5'-Isoxazoline]
pdb|2QRP|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(2-
Naphthyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-Isoxazoline]
pdb|2QRQ|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Methylphenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-
Isoxazoline]
pdb|2QRG|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Methoxyphenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-
Isoxazoline]
pdb|2QRH|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-
Phenylspiro[1,5-Anhydro-D-Glucitol-1,5'-Isoxazoline]
pdb|3BCR|A Chain A, Glycogen Phosphorylase B In Complex With Azt
pdb|3BCS|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Uracil
pdb|3BCU|A Chain A, Glucogen Phosphorylase Complex With Thymidine
pdb|3BD6|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Ribofuranosyl)
Cyanuric Acid
pdb|3E3L|A Chain A, The R-state Glycogen Phosphorylase
pdb|3E3L|B Chain B, The R-state Glycogen Phosphorylase
pdb|3E3L|C Chain C, The R-state Glycogen Phosphorylase
pdb|3E3L|D Chain D, The R-state Glycogen Phosphorylase
pdb|3CUT|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamide
pdb|3CUU|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamides
pdb|3CUV|A Chain A, Tracking Structure Activity Relationships Of Glycogen
Phosphorylase Inhibitors: Synthesis, Kinetic And
Crystallographic Evaluation Of Analogues Of N-(-D-
Glucopyranosyl)-N'-Oxamides
pdb|3CUW|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamides
pdb|3E3N|A Chain A, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|B Chain B, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|C Chain C, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|D Chain D, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|E Chain E, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|F Chain F, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|G Chain G, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|H Chain H, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3EBO|A Chain A, Glycogen Phosphorylase B/chrysin Complex
pdb|3EBP|A Chain A, Glycogen Phosphorylase B/flavopiridol Complex
pdb|3G2H|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2I|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazole
pdb|3G2J|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2K|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazole
pdb|3G2L|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2N|A Chain A, Crystal Structure Of N-Acylglucosylamine With Glycogen
Phosphorylase
pdb|3MQF|A Chain A, Glycogen Phosphorylase Complexed With
4-Fluorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MRT|A Chain A, Glycogen Phosphorylase Complexed With
4-Pyridinecarboxaldehyde-4- (Beta-D-Glucopyranosyl)
Thiosemicarbazone
pdb|3MRV|A Chain A, Glycogen Phosphorylase Complexed With
3-Hydroxybenzaldehyde-4-(Beta-D- Glucopyranosyl)
Thiosemicarbazone
pdb|3MRX|A Chain A, Glycogen Phosphorylase Complexed With
4-Methoxybenzaldehyde-4-(2,3,4,
6-Tetra-O-Acetyl-Beta-D-Glucopyranosyl)-
Thiosemicarbazone
pdb|3MS2|A Chain A, Glycogen Phosphorylase Complexed With
4-Methylbenzaldehyde-4-(Beta-D- Glucopyranosyl)
Thiosemicarbazone
pdb|3MS4|A Chain A, Glycogen Phosphorylase Complexed With
4-Trifluoromethylbenzaldehyde-4-
(Beta-D-Glucopyranosyl)-Thiosemicarbazone
pdb|3MS7|A Chain A, Glycogen Phosphorylase Complexed With
2-Chlorobenzaldehyde-4-(2,3,4,6-
Tetra-O-Acetyl-Beta-D-Glucopyranosyl) Thiosemicarbazone
pdb|3MT7|A Chain A, Glycogen Phosphorylase Complexed With
4-Bromobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MT8|A Chain A, Glycogen Phosphorylase Complexed With
4-Chlorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MT9|A Chain A, Glycogen Phosphorylase Complexed With
4-Nitrobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTA|A Chain A, Glycogen Phosphorylase Complexed With
3-Bromobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTB|A Chain A, Glycogen Phosphorylase Complexed With
3-Chlorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTD|A Chain A, Glycogen Phosphorylase Complexed With
4-Hydroxybenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MSC|A Chain A, Glycogen Phosphorylase Complexed With
2-Nitrobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3NP7|A Chain A, Glycogen Phosphorylase Complexed With
2,5-Dihydroxy-3-(Beta-D- Glucopyranosyl)-Chlorobenzene
And 2,5-Dihydroxy-4-(Beta-D-
Glucopyranosyl)-Chlorobenzene
pdb|3NP9|A Chain A, Glycogen Phosphorylase Complexed With
3-(Beta-D-Glucopyranosyl)-2-
Hydroxy-5-Methoxy-Chlorobenzene
pdb|3NPA|A Chain A, Glycogen Phosphorylase Complexed With
2,5-Dihydroxy-4-(Beta-D- Glucopyranosyl)-Bromo-Benzene
pdb|3S0J|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With 2,5-
Dihydroxy-4-(Beta-D-Glucopyranosyl)-Chlorobenzene
pdb|3SYM|A Chain A, Glycogen Phosphorylase B In Complex With 3
-C-(Hydroxymethyl)-Beta-D- Glucopyranonucleoside Of
5-Fluorouracil
pdb|3SYR|A Chain A, Glycogen Phosphorylase B In Complex With
Beta-D-Glucopyranonucleoside 5-Fluorouracil
pdb|3T3D|A Chain A, Glycogen Phosphorylase B In Complex With Glcu
pdb|3T3E|A Chain A, Glycogen Phosphorylase B In Complex With Glcclu
pdb|3T3G|A Chain A, Glycogen Phosphorylase B In Complex With Glcbru
pdb|3T3H|A Chain A, Glycogen Phosphorylase B In Complex With Glciu
pdb|3T3I|A Chain A, Glycogen Phosphorylase B In Complex With Glccf3u
Length = 842
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 406 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 461
>pdb|2FFR|A Chain A, Crystallographic Studies On
N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of
Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D-
Glucopyranosylamine
Length = 825
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 395 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 450
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A
With Amp And Glucose
Length = 842
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 407 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 462
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|B Chain B, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|C Chain C, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|D Chain D, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
Length = 828
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 121 IDLYYQHRVDTKIPIEVTIGELKKLVEEGKIKYIGLSEACAATIRRAHAVHPITAVQLE 179
I+ + +RV P +V LVEEG +K I ++ C A +HAV+ + + E
Sbjct: 397 INQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAG---SHAVNGVARIHSE 452
>pdb|1A80|A Chain A, Native 2,5-Diketo-D-Gluconic Acid Reductase A From
Corynbacterium Sp. Complexed With Nadph
Length = 277
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 36 PEPDMIALIHHAINSGITLLDTSDIYGPYTNE--ILVGKALKGGMRERVELATKFGISFA 93
P D + A+ G +DT+ IYG NE + A G R+ + + TK
Sbjct: 24 PPADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDDLFITTKLWNDRH 80
Query: 94 DGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQH 127
DG + PA A SL +L +D +DLY H
Sbjct: 81 DGDE----PA---AAIAESLAKLALDQVDLYLVH 107
>pdb|1HW6|A Chain A, Crystal Structure Of Apo-2,5-Diketo-D-Gluconate Reductase
Length = 278
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 36 PEPDMIALIHHAINSGITLLDTSDIYGPYTNE--ILVGKALKGGMRERVELATKFGISFA 93
P D + A+ G +DT+ IYG NE + A G R+ + + TK
Sbjct: 25 PPADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDDLFITTKLWNDRH 81
Query: 94 DGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQH 127
DG + PA A SL +L +D +DLY H
Sbjct: 82 DGDE----PA---AAIAESLAKLALDQVDLYLVH 108
>pdb|4EXK|A Chain A, A Chimera Protein Containing Mbp Fused To The C-Terminal
Domain Of The Uncharacterized Protein Stm14_2015 From
Salmonella Enterica
Length = 487
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 61 YGPYTNEILVGK-----ALKGGMRERVELATKFGISFADGGKIRG 100
YGP E + GK +G ER++++ K+ +SF IRG
Sbjct: 431 YGPLKKENVPGKYTQVITYRGHSNERIDISFKYAMSFTKEISIRG 475
>pdb|1M9H|A Chain A, Corynebacterium 2,5-dkgr A And Phe 22 Replaced With Tyr
(f22y), Lys 232 Replaced With Gly (k232g), Arg 238
Replaced With His (r238h)and Ala 272 Replaced With Gly
(a272g)in Presence Of Nadh Cofactor
Length = 278
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 36 PEPDMIALIHHAINSGITLLDTSDIYGPYTNE--ILVGKALKGGMRERVELATKFGISFA 93
P D + A+ G +DT+ IYG NE + A G R+ + + TK
Sbjct: 25 PPADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDDLFITTKLWNDRH 81
Query: 94 DGGKIRGDPAYVRACCEASLKRLDIDCIDLYYQH 127
DG + PA A SL +L +D +DLY H
Sbjct: 82 DGDE----PA---AAIAESLAKLALDQVDLYLVH 108
>pdb|3GQB|B Chain B, Crystal Structure Of The A3b3 Complex From V-atpase
pdb|3GQB|D Chain D, Crystal Structure Of The A3b3 Complex From V-atpase
Length = 464
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 20/116 (17%)
Query: 30 LYGPPEPEPDMIALIHHAINSGITLLD----TSDIYGPYTNEILVGK--------ALKGG 77
+Y P +P P + L+++ + G T D + +Y Y N + + K AL
Sbjct: 348 IYPPIDPLPSLSRLMNNGVGKGKTREDHKQVSDQLYSAYANGVDIRKLVAIIGEDALTEN 407
Query: 78 MRERVELATKFGISFADGGK--------IRGDPAYVRACCEASLKRLDIDCIDLYY 125
R ++ A F F + G+ ++ A + + LKR+ D I YY
Sbjct: 408 DRRYLQFADAFERFFINQGQQNRSIEESLQIAWALLSMLPQGELKRISKDHIGKYY 463
>pdb|2YUD|A Chain A, Solution Structure Of The Yth Domain In Yth Domain-
Containing Protein 1 (Putative Splicing Factor Yt521)
Length = 180
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 6 KRIKLGSQGLEVSAQGLGCMAMSCLYGPPEPEPDMIALIH 45
K +K+G G E+ L C CL PP+ D+ +IH
Sbjct: 140 KPVKIGRDGQEIE---LECGTQLCLLFPPDESIDLYQVIH 176
>pdb|4GUA|A Chain A, Alphavirus P23pro-Zbd
pdb|4GUA|B Chain B, Alphavirus P23pro-Zbd
pdb|4GUA|C Chain C, Alphavirus P23pro-Zbd
Length = 670
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 108 CCEASLKRLDID----CIDLYYQHRVDTKIPIEVTIGELK 143
C +L R D D C+D ++ R+D + ++ ++ ELK
Sbjct: 469 CLTTALDRTDADVTIYCLDKKWKERIDAALQLKESVTELK 508
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,318,045
Number of Sequences: 62578
Number of extensions: 258420
Number of successful extensions: 1032
Number of sequences better than 100.0: 124
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 922
Number of HSP's gapped (non-prelim): 128
length of query: 218
length of database: 14,973,337
effective HSP length: 95
effective length of query: 123
effective length of database: 9,028,427
effective search space: 1110496521
effective search space used: 1110496521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)