Query         027850
Match_columns 218
No_of_seqs    208 out of 2103
Neff          9.7 
Searched_HMMs 29240
Date          Tue Mar 26 18:28:07 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/027850.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2215-2219//hhsearch_pdb/027850hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1ogq_A PGIP-2, polygalacturona   1.0       1       1  170.2  12.8  173   25-199     3-185 (313)
  2 3rgz_A Protein brassinosteroid   1.0       1       1  169.0  14.7  174   21-198     5-210 (768)
  3 4ecn_A Leucine-rich repeat pro   1.0       1       1  166.7   9.0  171   24-199   265-559 (876)
  4 4eco_A Uncharacterized protein   1.0       1       1  165.5   9.7  173   25-199    27-316 (636)
  5 4fcg_A Uncharacterized protein   1.0       1       1  145.4   6.6  174   22-198    21-239 (328)
  6 3rgz_A Protein brassinosteroid   1.0       1       1  133.8  10.9  116   91-206   630-745 (768)
  7 2v9t_B SLIT homolog 2 protein    1.0       1       1  132.3  13.2  156   55-210     8-174 (220)
  8 3e6j_A Variable lymphocyte rec   1.0       1       1  130.5  15.7  150   55-205    16-176 (229)
  9 4g8a_A TOLL-like receptor 4; l   1.0       1       1  128.6  12.2  137   66-203    49-187 (635)
 10 2v70_A SLIT-2, SLIT homolog 2    1.0       1       1  128.5  11.4  155   55-209     8-174 (220)

No 1  
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=1.00  E-value=1  Score=170.23  Aligned_cols=173  Identities=35%  Similarity=0.600  Sum_probs=151.2

Q ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCEEEECCC---CCEEEEECCCCCCCC--CCCCCCCCCCCCCE
Q ss_conf             98027999999999558999998899999999987--431573999---978999839999731--16845679999988
Q 027850           25 NANVEGDALFALRRAVKDPQGVLQSWDPTLVDPCT--WFHVTCDAD---NRVTRLDLGNGKLSG--NLVPELGKLERLQY   97 (218)
Q Consensus        25 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~c~--~~gv~c~~~---~~l~~L~Ls~~~l~~--~~~~~~~~l~~L~~   97 (218)
                      +.+.|+.++.+||.++.++. .+.+|+.. .++|.  |.||+|+..   ++++.++++++.+.+  .+|..+..++.|+.
T Consensus         3 c~~~~~~aL~~~k~~~~~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~   80 (313)
T 1ogq_A            3 CNPQDKQALLQIKKDLGNPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF   80 (313)
T ss_dssp             SCHHHHHHHHHHHHHTTCCG-GGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred             CCHHHHHHHHHHHHHCCCCC-CCCCCCCC-CCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCE
T ss_conf             89899999999998667962-02477788-99776878625857898776488998889974687656965747888886


Q ss_pred             EECCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEEEEECCC
Q ss_conf             97337-85787788000268889889733885789996137899999989811884888898110289999999814781
Q 027850           98 LELYM-NNLAGQIPKELGQLKSLISLDLYHNNLTGPIPPSLSRLSNLKFLRLNGNKLTGKIPRELTKLGNLKILDVSNND  176 (218)
Q Consensus        98 L~L~~-n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~  176 (218)
                      |++++ |.+.+.+|..+..+++|++|++++|.+.+..|..+..+++|++|++++|.+.+..|..+..+++|++|++++|.
T Consensus        81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~  160 (313)
T 1ogq_A           81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR  160 (313)
T ss_dssp             EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred             EECCCCCCCCCCCCHHHHCCCCCCEEECCCCEECCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCC
T ss_conf             32788886366589668467899979896884677489788378988989697783577278678459887868894884


Q ss_pred             CCCCCCCC-CCCC-CCCCCCCCCCC
Q ss_conf             44138999-9877-77810234787
Q 027850          177 LCGTIPTA-GSFS-KFSEESFMNNP  199 (218)
Q Consensus       177 l~~~~~~~-~~l~-~L~~l~l~~N~  199 (218)
                      +++.+|.. ..++ +|+.+++++|.
T Consensus       161 l~~~~p~~l~~l~~~L~~L~L~~N~  185 (313)
T 1ogq_A          161 ISGAIPDSYGSFSKLFTSMTISRNR  185 (313)
T ss_dssp             CEEECCGGGGCCCTTCCEEECCSSE
T ss_pred             CCCCCCHHHHHHHHCCCEEECCCCE
T ss_conf             4581877886345318599885986


No 2  
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00  E-value=1  Score=169.01  Aligned_cols=174  Identities=26%  Similarity=0.386  Sum_probs=125.4

Q ss_pred             HCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCC---CC-----------
Q ss_conf             2147980279999999995589999988999999999874315739999789998399997311---68-----------
Q 027850           21 IATSNANVEGDALFALRRAVKDPQGVLQSWDPTLVDPCTWFHVTCDADNRVTRLDLGNGKLSGN---LV-----------   86 (218)
Q Consensus        21 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~c~~~gv~c~~~~~l~~L~Ls~~~l~~~---~~-----------   86 (218)
                      ++.+..++|++||++||.++.++. .+.+|... .++|.|.||+|+ .++|+.++++++.+.+.   ++           
T Consensus         5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~~-~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~   81 (768)
T 3rgz_A            5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWSSN-KNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES   81 (768)
T ss_dssp             ---CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT-SCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCC-CCCCCCCC-CCCCCCCCEEEC-CCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCC
T ss_conf             656687899999999996678962-14687899-987688413878-992789877899867755766965731680224


Q ss_pred             ------------CCCCCCCCCCEEECCCCCCCCCCCC--CCCCCCCCCEEECCCCCCCCCCCCCC-CCCCCCCEEECCCC
Q ss_conf             ------------4567999998897337857877880--00268889889733885789996137-89999998981188
Q 027850           87 ------------PELGKLERLQYLELYMNNLAGQIPK--ELGQLKSLISLDLYHNNLTGPIPPSL-SRLSNLKFLRLNGN  151 (218)
Q Consensus        87 ------------~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~ls~n~l~~~~p~~~-~~l~~L~~L~l~~n  151 (218)
                                  ..+..+++|++|++++|.+.+.+|.  .+..+++|++|++++|.+.+..|..+ ..+++|++|++++|
T Consensus        82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n  161 (768)
T 3rgz_A           82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN  161 (768)
T ss_dssp             EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred             CCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCC
T ss_conf             67868886787033245788998989898578707896787278899989896882677479778563889998989798


Q ss_pred             CCCCCCCHH---CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             488889811---02899999998147814413899998777781023478
Q 027850          152 KLTGKIPRE---LTKLGNLKILDVSNNDLCGTIPTAGSFSKFSEESFMNN  198 (218)
Q Consensus       152 ~l~~~~p~~---~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~l~l~~N  198 (218)
                      .+++..+..   +..+++|++|++++|.+.+..+. ..+++|+.|++++|
T Consensus       162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n  210 (768)
T 3rgz_A          162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSN  210 (768)
T ss_dssp             CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSS
T ss_pred             CCCCCCCHHHHHHCCCCCCCEEECCCCCCCCCCCC-CCCCCCCEEECCCC
T ss_conf             35885871556643589889898978803465784-54786898989288


No 3  
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=1.00  E-value=1  Score=166.72  Aligned_cols=171  Identities=21%  Similarity=0.224  Sum_probs=140.3

Q ss_pred             CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC----CCC--CCC------------CEEEECCCCCEEEEECCCCCCCCCC
Q ss_conf             7980279999999995589999988999999----999--874------------3157399997899983999973116
Q 027850           24 SNANVEGDALFALRRAVKDPQGVLQSWDPTL----VDP--CTW------------FHVTCDADNRVTRLDLGNGKLSGNL   85 (218)
Q Consensus        24 ~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~----~~~--c~~------------~gv~c~~~~~l~~L~Ls~~~l~~~~   85 (218)
                      +....|+.+|.+++.++.++     +|+...    .++  |.|            .||.|+..++|+.|+|+++++.|.+
T Consensus       265 ~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i  339 (876)
T 4ecn_A          265 AEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV  339 (876)
T ss_dssp             CHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred             CCCHHHHHHHHHHHHHCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCC
T ss_conf             46317899999999973799-----9886898653367764034666545335768428369997989987247899948


Q ss_pred             CCCCCCCCCCCEEEC-CCCCCCCC--------------------------------------------------------
Q ss_conf             845679999988973-37857877--------------------------------------------------------
Q 027850           86 VPELGKLERLQYLEL-YMNNLAGQ--------------------------------------------------------  108 (218)
Q Consensus        86 ~~~~~~l~~L~~L~L-~~n~l~~~--------------------------------------------------------  108 (218)
                      |+++..++.|+.|++ ++|.+.+.                                                        
T Consensus       340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~  419 (876)
T 4ecn_A          340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK  419 (876)
T ss_dssp             CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred             CHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             55774155562843012563356664222344544115678887776666542037511156787877650733243222


Q ss_pred             --------------------CCCCCCCCCCCCEEECCCCCCCC-----------------CCCCCCC--CCCCCCEEECC
Q ss_conf             --------------------88000268889889733885789-----------------9961378--99999989811
Q 027850          109 --------------------IPKELGQLKSLISLDLYHNNLTG-----------------PIPPSLS--RLSNLKFLRLN  149 (218)
Q Consensus       109 --------------------~p~~~~~l~~L~~L~ls~n~l~~-----------------~~p~~~~--~l~~L~~L~l~  149 (218)
                                          +|..+..+++|+.|++++|.+.+                 .+|..++  .+++|+.|+++
T Consensus       420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls  499 (876)
T 4ecn_A          420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY  499 (876)
T ss_dssp             CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred             CCCCCHHHCEECCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECC
T ss_conf             35442312040566676152118875699987897968867887465322332222224458744402559997789871


Q ss_pred             CCCCCCCCCHHCCCCCCCCEEEEECCC-CCC-CCCCC--------CCCCCCCCCCCCCCC
Q ss_conf             884888898110289999999814781-441-38999--------987777810234787
Q 027850          150 GNKLTGKIPRELTKLGNLKILDVSNND-LCG-TIPTA--------GSFSKFSEESFMNNP  199 (218)
Q Consensus       150 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~~~~--------~~l~~L~~l~l~~N~  199 (218)
                      +|.+.+.+|..+..+++|+.|++++|+ +++ .+|..        ..+++|+.|++++|.
T Consensus       500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~  559 (876)
T 4ecn_A          500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN  559 (876)
T ss_dssp             SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred             CCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCC
T ss_conf             898875273877379998999896898765664617787523301556883199822894


No 4  
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=1.00  E-value=1  Score=165.52  Aligned_cols=173  Identities=19%  Similarity=0.219  Sum_probs=146.6

Q ss_pred             CCCHHHHHHHHHHHHCCCCCCC--------CCCCCCCCCCCCCC---CEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             9802799999999955899999--------88999999999874---315739999789998399997311684567999
Q 027850           25 NANVEGDALFALRRAVKDPQGV--------LQSWDPTLVDPCTW---FHVTCDADNRVTRLDLGNGKLSGNLVPELGKLE   93 (218)
Q Consensus        25 ~~~~~~~~l~~~~~~~~~~~~~--------~~~w~~~~~~~c~~---~gv~c~~~~~l~~L~Ls~~~l~~~~~~~~~~l~   93 (218)
                      ....|+.||.+++.++.++...        ..+|+.. .++|.|   .||+|+..++|+.|+++++.+.|.+|+.+..++
T Consensus        27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~  105 (636)
T 4eco_A           27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLT  105 (636)
T ss_dssp             HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCT
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCHHHHCCC
T ss_conf             6778899999999975899745477677657887779-980001477984876789788998427665772885785684


Q ss_pred             CCCEEECCCCCC--------------------------------------------------------------------
Q ss_conf             998897337857--------------------------------------------------------------------
Q 027850           94 RLQYLELYMNNL--------------------------------------------------------------------  105 (218)
Q Consensus        94 ~L~~L~L~~n~l--------------------------------------------------------------------  105 (218)
                      .|+.|++++|.+                                                                    
T Consensus       106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~  185 (636)
T 4eco_A          106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD  185 (636)
T ss_dssp             TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred             CCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
T ss_conf             51189876885123774334532356733888888876577755411706667788777764275546541013344213


Q ss_pred             ----------CCCCCCCCCCCCCCCEEECCCCCCCCC-----------------CCCCCC--CCCCCCEEECCCCCCCCC
Q ss_conf             ----------877880002688898897338857899-----------------961378--999999898118848888
Q 027850          106 ----------AGQIPKELGQLKSLISLDLYHNNLTGP-----------------IPPSLS--RLSNLKFLRLNGNKLTGK  156 (218)
Q Consensus       106 ----------~~~~p~~~~~l~~L~~L~ls~n~l~~~-----------------~p~~~~--~l~~L~~L~l~~n~l~~~  156 (218)
                                ++ +|..+..+++|++|++++|.+.+.                 +|..+.  .+++|++|++++|.+.+.
T Consensus       186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~  264 (636)
T 4eco_A          186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK  264 (636)
T ss_dssp             TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred             HHHCCCCCCCCC-CCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEECCCCCCCC
T ss_conf             001013677750-7877725647878988688236642322122222100102486322004468788898048857762


Q ss_pred             CCHHCCCCCCCCEEEEECCC-CCC-CCCCC-CCC------CCCCCCCCCCCC
Q ss_conf             98110289999999814781-441-38999-987------777810234787
Q 027850          157 IPRELTKLGNLKILDVSNND-LCG-TIPTA-GSF------SKFSEESFMNNP  199 (218)
Q Consensus       157 ~p~~~~~l~~L~~L~Ls~N~-l~~-~~~~~-~~l------~~L~~l~l~~N~  199 (218)
                      +|..+..+++|++|++++|. +++ .+|.. +.+      ++|+.|++++|.
T Consensus       265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~  316 (636)
T 4eco_A          265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN  316 (636)
T ss_dssp             CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred             CHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCCC
T ss_conf             8388834999788978479887665335788754304657888889897993


No 5  
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=1.00  E-value=1  Score=145.35  Aligned_cols=174  Identities=21%  Similarity=0.266  Sum_probs=104.5

Q ss_pred             CCCCCCHHHHHHHHHHHHC-CCCCCCCCCCC---CCCCCCCCCCEEEEC---------CCCCEEEEECCCCCCCCCCCCC
Q ss_conf             1479802799999999955-89999988999---999999874315739---------9997899983999973116845
Q 027850           22 ATSNANVEGDALFALRRAV-KDPQGVLQSWD---PTLVDPCTWFHVTCD---------ADNRVTRLDLGNGKLSGNLVPE   88 (218)
Q Consensus        22 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~~w~---~~~~~~c~~~gv~c~---------~~~~l~~L~Ls~~~l~~~~~~~   88 (218)
                      ..+...+++.++.+|+... .++......|.   ....++|.|.|+.|+         ...+++.|+++++.+. .+|..
T Consensus        21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~   99 (328)
T 4fcg_A           21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ   99 (328)
T ss_dssp             --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCH-HCCHH
T ss_conf             44458557889999997535773001221136665665645557852320077774033356069974699832-23865


Q ss_pred             CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC----------
Q ss_conf             6799999889733785787788000268889889733885789996137899999989811884888898----------
Q 027850           89 LGKLERLQYLELYMNNLAGQIPKELGQLKSLISLDLYHNNLTGPIPPSLSRLSNLKFLRLNGNKLTGKIP----------  158 (218)
Q Consensus        89 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p----------  158 (218)
                      +..+++|+.|++++|.+. .+|..+..+++|++|++++|.+. .+|..+..+++|++|++++|++.+.+|          
T Consensus       100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~  177 (328)
T 4fcg_A          100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG  177 (328)
T ss_dssp             GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred             HHHCCCCCEEECCCCCCC-CHHHHHHCCCCCCEEECCCCCCC-CCCHHHHCCCCCCEEECCCCCCCCCCCHHHHHCCCHH
T ss_conf             512878888879999965-45188725679998989899612-0709775386879777989998460496676232113


Q ss_pred             ----------------------HHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ----------------------1102899999998147814413899998777781023478
Q 027850          159 ----------------------RELTKLGNLKILDVSNNDLCGTIPTAGSFSKFSEESFMNN  198 (218)
Q Consensus       159 ----------------------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~l~l~~N  198 (218)
                                            ..+..+++|++|++++|.+.+.++....+++|+.|++++|
T Consensus       178 ~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n  239 (328)
T 4fcg_A          178 EHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGC  239 (328)
T ss_dssp             CEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTC
T ss_pred             HHCCCCCCCEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHCCCCCCCEEECCCC
T ss_conf             32558899988776898572617656999888898637987767354546998999878589


No 6  
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=1.00  E-value=1  Score=133.83  Aligned_cols=116  Identities=41%  Similarity=0.722  Sum_probs=72.5

Q ss_pred             CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEE
Q ss_conf             99999889733785787788000268889889733885789996137899999989811884888898110289999999
Q 027850           91 KLERLQYLELYMNNLAGQIPKELGQLKSLISLDLYHNNLTGPIPPSLSRLSNLKFLRLNGNKLTGKIPRELTKLGNLKIL  170 (218)
Q Consensus        91 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L  170 (218)
                      .++.|+.|++++|.+.+.+|..+..++.|+.|++++|.+.+.+|..++.++.|+.|++++|++++.+|..+..++.|++|
T Consensus       630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L  709 (768)
T 3rgz_A          630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI  709 (768)
T ss_dssp             SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred             CCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCEE
T ss_conf             33566579785880155587788414157878486880388789678477789989897880238688677578878978


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             814781441389999877778102347878889886
Q 027850          171 DVSNNDLCGTIPTAGSFSKFSEESFMNNPRLEGPEL  206 (218)
Q Consensus       171 ~Ls~N~l~~~~~~~~~l~~L~~l~l~~N~~l~~~~~  206 (218)
                      ++++|+++|.+|..+.+..+....+.+|+.+||.++
T Consensus       710 ~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l  745 (768)
T 3rgz_A          710 DLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL  745 (768)
T ss_dssp             ECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS
T ss_pred             ECCCCCCCCCCCCCHHHCCCCHHHHCCCCHHCCCCC
T ss_conf             796881556089960102489777569832108877


No 7  
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=1.00  E-value=1  Score=132.32  Aligned_cols=156  Identities=22%  Similarity=0.282  Sum_probs=137.1

Q ss_pred             CCCCCCCEEEECC----------CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf             9998743157399----------997899983999973116845679999988973378578778800026888988973
Q 027850           55 VDPCTWFHVTCDA----------DNRVTRLDLGNGKLSGNLVPELGKLERLQYLELYMNNLAGQIPKELGQLKSLISLDL  124 (218)
Q Consensus        55 ~~~c~~~gv~c~~----------~~~l~~L~Ls~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l  124 (218)
                      .+.|.|..|.|..          +.+++.|++++|.+....+..|..++.|+.|++++|.+.+..|..|..+++|++|++
T Consensus         8 ~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L   87 (220)
T 2v9t_B            8 ACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVL   87 (220)
T ss_dssp             TSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEEC
T ss_pred             CCEECCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEEC
T ss_conf             89988998881999917377765867799989899089869757328889999999999489739878508757898889


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf             388578999613789999998981188488889811028999999981478144138999-9877778102347878889
Q 027850          125 YHNNLTGPIPPSLSRLSNLKFLRLNGNKLTGKIPRELTKLGNLKILDVSNNDLCGTIPTA-GSFSKFSEESFMNNPRLEG  203 (218)
Q Consensus       125 s~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~l~~L~~l~l~~N~~l~~  203 (218)
                      ++|.+....+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+.. ..+++|+.+++++|+..|.
T Consensus        88 s~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~  167 (220)
T 2v9t_B           88 YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD  167 (220)
T ss_dssp             CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred             CCCCCCCCCHHHCCCCCCCCEEECCCCCCCEECHHHCCCCCCCCEEECCCCCCCEECHHHHHCCCCCCEEEECCCCCCCC
T ss_conf             99948836976726787889888999978876887838987879898999908877998870787879898479896788


Q ss_pred             CCCCCCC
Q ss_conf             8866766
Q 027850          204 PELMGFV  210 (218)
Q Consensus       204 ~~~~~~~  210 (218)
                      +++.++.
T Consensus       168 c~l~~l~  174 (220)
T 2v9t_B          168 CHLKWLA  174 (220)
T ss_dssp             GGGHHHH
T ss_pred             CCCHHHH
T ss_conf             7647999


No 8  
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=1.00  E-value=1  Score=130.48  Aligned_cols=150  Identities=26%  Similarity=0.262  Sum_probs=133.9

Q ss_pred             CCCCCCCEEEECC----------CCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf             9998743157399----------997899983999973116845679999988973378578778800026888988973
Q 027850           55 VDPCTWFHVTCDA----------DNRVTRLDLGNGKLSGNLVPELGKLERLQYLELYMNNLAGQIPKELGQLKSLISLDL  124 (218)
Q Consensus        55 ~~~c~~~gv~c~~----------~~~l~~L~Ls~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l  124 (218)
                      .+.|+|.+|.|..          ..+++.|++++|.+.+..+..|..++.|+.|++++|.+....+..+..+++|+.|++
T Consensus        16 ~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~L   95 (229)
T 3e6j_A           16 QCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDL   95 (229)
T ss_dssp             TCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred             CCEEECCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCHHHCCCCCCCCEEEC
T ss_conf             88770998574689957048888999878986899058309888657637758789899899859646346788388889


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf             388578999613789999998981188488889811028999999981478144138999-9877778102347878889
Q 027850          125 YHNNLTGPIPPSLSRLSNLKFLRLNGNKLTGKIPRELTKLGNLKILDVSNNDLCGTIPTA-GSFSKFSEESFMNNPRLEG  203 (218)
Q Consensus       125 s~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~l~~L~~l~l~~N~~l~~  203 (218)
                      ++|++....+..+..+++|+.|++++|.++ .+|..+..+++|++|++++|.+.+..+.. ..+++|+.+++.+|+.-|.
T Consensus        96 s~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~  174 (229)
T 3e6j_A           96 GTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE  174 (229)
T ss_dssp             CSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred             CCCCCCCCCHHHHCCCHHHCEEECCCCCCC-CCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCC
T ss_conf             999587209668373543182764577365-0584514577777899999948865999971778878898509973477


Q ss_pred             CC
Q ss_conf             88
Q 027850          204 PE  205 (218)
Q Consensus       204 ~~  205 (218)
                      +.
T Consensus       175 c~  176 (229)
T 3e6j_A          175 CR  176 (229)
T ss_dssp             BG
T ss_pred             CC
T ss_conf             63


No 9  
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=1.00  E-value=1  Score=128.56  Aligned_cols=137  Identities=20%  Similarity=0.164  Sum_probs=120.1

Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             99997899983999973116845679999988973378578778800026888988973388578999613789999998
Q 027850           66 DADNRVTRLDLGNGKLSGNLVPELGKLERLQYLELYMNNLAGQIPKELGQLKSLISLDLYHNNLTGPIPPSLSRLSNLKF  145 (218)
Q Consensus        66 ~~~~~l~~L~Ls~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~  145 (218)
                      +.+..++.|||++|.++...+.+|..+++|+.|++++|.+.+..+.+|..+++|++|++++|+++...+..|..+++|++
T Consensus        49 ~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~  128 (635)
T 4g8a_A           49 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK  128 (635)
T ss_dssp             SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCE
T ss_pred             CCCCCCCEEEEECCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCCCHHHHCCCCCCCE
T ss_conf             98868778980299889889789728999888989798489869567627999998976398489879788657989999


Q ss_pred             EECCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCC-CCCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf             98118848888981102899999998147814413-8999-9877778102347878889
Q 027850          146 LRLNGNKLTGKIPRELTKLGNLKILDVSNNDLCGT-IPTA-GSFSKFSEESFMNNPRLEG  203 (218)
Q Consensus       146 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~-~~l~~L~~l~l~~N~~l~~  203 (218)
                      |++++|++++..+..+..+++|++|++++|.+.+. .|.. ..+++|+.|++++| .+.+
T Consensus       129 L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N-~l~~  187 (635)
T 4g8a_A          129 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN-KIQS  187 (635)
T ss_dssp             EECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS-CCCE
T ss_pred             EECCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCHHHCCCHHHHHHCCCCC-CCCC
T ss_conf             9899996898784565237666760256676666778133223402233125675-0111


No 10 
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=1.00  E-value=1  Score=128.46  Aligned_cols=155  Identities=19%  Similarity=0.210  Sum_probs=134.7

Q ss_pred             CCCCCCCEEEECC----------CCCEEEEECCCCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             9998743157399----------9978999839999731168-4567999998897337857877880002688898897
Q 027850           55 VDPCTWFHVTCDA----------DNRVTRLDLGNGKLSGNLV-PELGKLERLQYLELYMNNLAGQIPKELGQLKSLISLD  123 (218)
Q Consensus        55 ~~~c~~~gv~c~~----------~~~l~~L~Ls~~~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~  123 (218)
                      .+.|.|..+.|..          ...++.|++++|.+.+..+ ..|..++.|+.|++++|.+.+..+..|..+++|++|+
T Consensus         8 ~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~   87 (220)
T 2v70_A            8 KCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL   87 (220)
T ss_dssp             TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred             CCEECCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCEECHHHHCCCCCCCEEE
T ss_conf             89977999683899806275677988898985798277517624353688889898999928988987827898889898


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf             3388578999613789999998981188488889811028999999981478144138999-987777810234787888
Q 027850          124 LYHNNLTGPIPPSLSRLSNLKFLRLNGNKLTGKIPRELTKLGNLKILDVSNNDLCGTIPTA-GSFSKFSEESFMNNPRLE  202 (218)
Q Consensus       124 ls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~l~~L~~l~l~~N~~l~  202 (218)
                      +++|.+.+..+..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++..|.. ..+++|+.+++++|+.-|
T Consensus        88 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c  167 (220)
T 2v70_A           88 LTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC  167 (220)
T ss_dssp             CCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred             CCCCCCCCCCHHHHCCCCCCCEEECCCCCCCEECHHHCCCCCCCCEEECCCCCCCEECHHHHCCCCCCCEEEECCCCCCC
T ss_conf             99990582398683687478988998993784798670788668998899994887898884477777988815959767


Q ss_pred             CCCCCCC
Q ss_conf             9886676
Q 027850          203 GPELMGF  209 (218)
Q Consensus       203 ~~~~~~~  209 (218)
                      .+++.++
T Consensus       168 ~c~l~~l  174 (220)
T 2v70_A          168 NCYLAWL  174 (220)
T ss_dssp             SGGGHHH
T ss_pred             CCCHHHH
T ss_conf             8805899


Done!