Query 027852
Match_columns 218
No_of_seqs 116 out of 424
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 02:26:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027852.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/027852hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08718 GLTP: Glycolipid tran 100.0 1.6E-48 3.6E-53 318.2 13.6 143 29-171 1-149 (149)
2 KOG3221 Glycolipid transfer pr 100.0 3.4E-47 7.3E-52 319.1 15.1 181 25-209 12-196 (199)
3 KOG4189 Uncharacterized conser 100.0 1.1E-42 2.4E-47 291.5 17.8 202 2-209 2-207 (209)
4 smart00265 BH4 BH4 Bcl-2 homol 36.1 30 0.00066 20.5 1.7 16 193-208 3-18 (27)
5 PF04711 ApoA-II: Apolipoprote 33.8 1.7E+02 0.0037 21.5 5.6 55 10-64 15-71 (76)
6 PF13496 DUF4120: Domain of un 33.0 13 0.00029 28.1 -0.2 13 134-146 81-93 (95)
7 PF00036 EF-hand_1: EF hand; 32.9 40 0.00088 19.7 2.0 28 13-43 2-29 (29)
8 PF02180 BH4: Bcl-2 homology r 31.4 51 0.0011 19.6 2.2 16 193-208 3-18 (27)
9 PF09409 PUB: PUB domain; Int 28.8 1.1E+02 0.0024 22.1 4.1 40 104-143 6-48 (87)
10 PF13959 DUF4217: Domain of un 19.6 64 0.0014 22.4 1.3 39 113-152 4-43 (65)
No 1
>PF08718 GLTP: Glycolipid transfer protein (GLTP); InterPro: IPR014830 Glycolipid transfer protein (GLTP) is a cytosolic protein that catalyses the intermembrane transfer of glycolipids such as glycosphingolipids, glyceroglycolipids, and possibly glucosylceramides, but not of phospholipids. The GLTP protein consists of a single domain with a multi-helical structure consisting of two layers of orthogonally packed helices [, ]. The GLTP domain is also found in trans-Golgi network proteins involved in Golgi-to-cell-surface membrane traffic [].; GO: 0017089 glycolipid transporter activity, 0051861 glycolipid binding, 0046836 glycolipid transport, 0005737 cytoplasm; PDB: 2BV7_A 1TFJ_A 1WBE_A 3KV0_A 3RWV_B 2EVD_A 2EUK_A 3RZN_A 2EVL_A 3S0K_A ....
Probab=100.00 E-value=1.6e-48 Score=318.24 Aligned_cols=143 Identities=32% Similarity=0.623 Sum_probs=130.7
Q ss_pred CCcchHHHHHHHhHHHHHHHhhchhhHHHHHHHHHhHHHHHH-----cccccccHHHHHHHHHhcCccccCCcchhhHHH
Q 027852 29 ADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAE-----ASKSILTLQSVIDRDIEGNCVRKAGSHTRNLLR 103 (218)
Q Consensus 29 ~~I~t~~fL~a~~~l~~~~d~LG~vFs~v~~Dv~~kI~~l~~-----~~~~~~TL~~mv~~E~~~g~~~~~~S~tr~LLw 103 (218)
++|+|.+||+||++|++|||.||++|+||++||.+||++|++ +|++|.||++||++|++.|+.++++||+++|||
T Consensus 1 n~i~~~~fl~a~~~l~~~~~~lG~~f~~v~~Dv~~ni~~l~~~~~~~~~~~~~tl~~~v~~E~~~~~~~~~~s~s~~LLw 80 (149)
T PF08718_consen 1 NDIDTEPFLEACRELVKFFDKLGTVFSFVKSDVQGNIKKLRKAYQEEDPEKYKTLESMVDYEVENGTHKKKGSGSRTLLW 80 (149)
T ss_dssp SEEBHHHHHHHHTTSHHHHCCSSGGGHHHHHHHHHHHHHHHHHH-HHSTTTTSBHHHHHHHHHHHHGGGTSSHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCChhhhccHHHHHHHHHHHhcccccccHHHHHHH
Confidence 479999999999999999999999999999999999999875 367899999999999999998888899999999
Q ss_pred HHhhHHHHHHHHHHHHhcCCC-ChhHHHHHHHHhhhccccchHHHHHHHHHhhhCCCHHHHHHHHccCC
Q 027852 104 VKRGLDMVRVLFEQILAAEGN-SLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDG 171 (218)
Q Consensus 104 L~RaL~Fi~~fl~~l~~~~~~-~ls~~a~~AY~~tL~~yH~W~vR~a~~lA~~alP~R~~fl~~l~~~~ 171 (218)
|||||+|++.||+++.+++++ +++++|++||++||+|||||+||++|++||+++|+|++|++++++++
T Consensus 81 L~RaL~Fi~~~l~~l~~~~~~~~~~~~~~~AY~~tL~~yH~w~vr~~~~~a~~~~P~R~~fl~~l~~~~ 149 (149)
T PF08718_consen 81 LHRALEFIVAFLENLLESPDDEKLSDAAREAYDKTLAPYHGWIVRKAFKLALKALPSRSDFLKKLGGNN 149 (149)
T ss_dssp HHHHHHHHHHHHHHHHTS--BTBHHHHHHHHHHHHTGGGB-HHHHHHHHHHHHT--BHHHHHHHHTTT-
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHhCCC
Confidence 999999999999999998665 49999999999999999999999999999999999999999998763
No 2
>KOG3221 consensus Glycolipid transfer protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.4e-47 Score=319.13 Aligned_cols=181 Identities=18% Similarity=0.314 Sum_probs=172.2
Q ss_pred ccCCCCcchHHHHHHHhHHHHHHHhhchhhHHHHHHHHHhHHHHHH----cccccccHHHHHHHHHhcCccccCCcchhh
Q 027852 25 NSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAE----ASKSILTLQSVIDRDIEGNCVRKAGSHTRN 100 (218)
Q Consensus 25 ~~~~~~I~t~~fL~a~~~l~~~~d~LG~vFs~v~~Dv~~kI~~l~~----~~~~~~TL~~mv~~E~~~g~~~~~~S~tr~ 100 (218)
.+++++|+|.+||+||.+|+||+|+||++|+||++||+|||+++.+ ++++++|||.+|..|++..... ++|||++
T Consensus 12 l~~d~~i~T~~FL~ac~~i~pvid~lG~~ftpVk~Di~gNI~kv~~~y~~d~~k~~~Lq~~i~~eie~~~a~-~~sat~a 90 (199)
T KOG3221|consen 12 LPDDGKIETGPFLEACKHIVPVIDKLGAVFTPVKSDISGNITKVKKVYDTDKEKFKYLQKIVKVEIETDIAE-KVSATLA 90 (199)
T ss_pred CCcccCCccHHHHHHHhhhhhHHHHhhhhhHhHHHHhhccHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcc-cchhhHH
Confidence 5789999999999999999999999999999999999999999875 4889999999999999998877 8899999
Q ss_pred HHHHHhhHHHHHHHHHHHHhcCCCChhHHHHHHHHhhhccccchHHHHHHHHHhhhCCCHHHHHHHHccCCCCchhhHHH
Q 027852 101 LLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDGESYPMTYLF 180 (218)
Q Consensus 101 LLwL~RaL~Fi~~fl~~l~~~~~~~ls~~a~~AY~~tL~~yH~W~vR~a~~lA~~alP~R~~fl~~l~~~~~~~~~~~~~ 180 (218)
||||+|||+|+..||++|.++.+..+.+++.+||++||+|||||++|++|++|++++|+|++|++.++-+ +...+.|++
T Consensus 91 LLWLkRgldF~~~~l~~l~~~~~~~l~~av~daY~kTLK~~HGwI~q~~FkvaLklvP~r~~Fl~als~~-d~t~~~~~e 169 (199)
T KOG3221|consen 91 LLWLKRGLDFTLAFLQELVNGESDCLIQAVADAYEKTLKKYHGWIVQSTFKVALKLVPDRKTFLKALSAG-DETYDECIE 169 (199)
T ss_pred HHHHHhHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCcHHHHHHHHhcc-cchHHHHHH
Confidence 9999999999999999999988777999999999999999999999999999999999999999999877 677889999
Q ss_pred HhhhhhhhcchhhhHHHHHHHHHHhhhhh
Q 027852 181 LLSNMILTFTFRFNFSFLLNNYILKKFHI 209 (218)
Q Consensus 181 ~l~~~~~~~~~~~~~~~~~~~y~~~~~~~ 209 (218)
.|+. ++.+|+-+++.+..+|..+++..
T Consensus 170 di~~--fl~~~~~~L~~i~~~l~~~~ld~ 196 (199)
T KOG3221|consen 170 DITS--FLSLLTPILKEIYFVLEQYGLDD 196 (199)
T ss_pred HHHH--HHHHHHhhHHHHHHHHHHhcccc
Confidence 9999 99999999999999999998864
No 3
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.1e-42 Score=291.49 Aligned_cols=202 Identities=39% Similarity=0.545 Sum_probs=175.5
Q ss_pred CCCCCCCchHHHHHHHHHHHhhhccCCCCcchHHHHHHHhHHHHHHHhhchhhHHHHHHHHHhHHHHHHc-ccccccHHH
Q 027852 2 AGTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEA-SKSILTLQS 80 (218)
Q Consensus 2 ~~~~~~~~l~~~~~~F~~~~~~v~~~~~~I~t~~fL~a~~~l~~~~d~LG~vFs~v~~Dv~~kI~~l~~~-~~~~~TL~~ 80 (218)
.+.+...++.++...|+-+..++.+++++|++.+|+.||+++++||++||++|+||.+|+.+||+.|.+. ++...|+..
T Consensus 2 ~~~~~~~~~~~i~~~~~~i~~~v~~e~~eV~L~~f~~a~e~v~~~f~~lG~iF~Fve~Dv~aKid~L~~l~ssd~et~rt 81 (209)
T KOG4189|consen 2 FCMEQLGPLPKILQAFKTIEKSVIEEDNEVDLDQFLLAYEEVCKFFGCLGTIFSFVEKDVRAKIDDLVELRSSDPETYRT 81 (209)
T ss_pred cchhhccchHHHHHHHHHHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHH
Confidence 4566778899999999999988888989999999999999999999999999999999999999999875 445778888
Q ss_pred HHHHHHhcCccccCC--cchhhHHHHHhhHHHHHHHHHHHHhcC-CCChhHHHHHHHHhhhccccchHHHHHHHHHhhhC
Q 027852 81 VIDRDIEGNCVRKAG--SHTRNLLRVKRGLDMVRVLFEQILAAE-GNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYAL 157 (218)
Q Consensus 81 mv~~E~~~g~~~~~~--S~tr~LLwL~RaL~Fi~~fl~~l~~~~-~~~ls~~a~~AY~~tL~~yH~W~vR~a~~lA~~al 157 (218)
|++.+.++...++.| ||+|+||+|+|||+|+..||.++.+++ +++++++|++||++||+|||||+||+|+++||+++
T Consensus 82 ild~~~e~~~~~~~G~~Sgtr~Llrl~R~LefV~efl~~i~as~nD~s~~diakesYd~~lakhHsW~IRtAV~~amYtL 161 (209)
T KOG4189|consen 82 ILDLDTEESEVGTIGNQSGTRNLLRLNRALEFVIEFLDQIFASTNDESLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTL 161 (209)
T ss_pred HHHHHHHHhHhcccCccccchHHHHHHhhHHHHHHHHHHHHcCCCcchhhHHHHHHHHHhhhccccHHHHHHHHHHHHhC
Confidence 888888887776677 999999999999999999999999885 68999999999999999999999999999999999
Q ss_pred CCHHHHHHHHccCCCCchhhHHHHhhhhhhhcchhhhHHHHHHHHHHhhhhh
Q 027852 158 PTRAQLLRKLNEDGESYPMTYLFLLSNMILTFTFRFNFSFLLNNYILKKFHI 209 (218)
Q Consensus 158 P~R~~fl~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~ 209 (218)
|+|.+|+..++++.+.+. ++.. - .+..=|-.+--+.++|+.+.+|.
T Consensus 162 PTR~~lL~~Lk~d~~~~~-~~~~---~--~~~~~r~ii~~~~~l~~~~~l~~ 207 (209)
T KOG4189|consen 162 PTRPELLCRLKEDMDAAN-QNMQ---S--YNRDSRPIIRRVDKLYELFELTD 207 (209)
T ss_pred CCcHHHHHHHHhHHHHHH-HHHH---H--HHHccChHHHHHhHHHHHhcccc
Confidence 999999999998875544 2212 1 33444556777778888888775
No 4
>smart00265 BH4 BH4 Bcl-2 homology region 4.
Probab=36.14 E-value=30 Score=20.55 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=13.5
Q ss_pred hhHHHHHHHHHHhhhh
Q 027852 193 FNFSFLLNNYILKKFH 208 (218)
Q Consensus 193 ~~~~~~~~~y~~~~~~ 208 (218)
.|.-.||++||.++|-
T Consensus 3 ~~nRelV~~yv~yKLs 18 (27)
T smart00265 3 LDNRELVVDYVTYKLS 18 (27)
T ss_pred cchHHHHHHHHHHHHh
Confidence 4677899999999984
No 5
>PF04711 ApoA-II: Apolipoprotein A-II (ApoA-II); InterPro: IPR006801 Apolipoprotein A-II (ApoA-II) is the second major apolipoprotein of high density lipoprotein in human plasma. Mature ApoA-II is present as a dimer of two 77-amino acid chains joined by a disulphide bridge []. ApoA-II regulates many steps in HDL metabolism, and its role in coronary heart disease is unclear []. In bovine serum, the ApoA-II homologue is present in almost free form. Bovine ApoA-II shows antimicrobial activity against Escherichia coli and yeasts in phosphate buffered saline (PBS) [].; GO: 0008289 lipid binding, 0006869 lipid transport, 0042157 lipoprotein metabolic process, 0005576 extracellular region; PDB: 1L6L_W 2OU1_E.
Probab=33.84 E-value=1.7e+02 Score=21.49 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHhhhccCCCCcchHHHH-HHHhHHHHHHHhhch-hhHHHHHHHHHh
Q 027852 10 LTKISESFKELAATVNSQAADVELAAFS-RACSYVSPLFGCLGI-AFKFAEMDYVAK 64 (218)
Q Consensus 10 l~~~~~~F~~~~~~v~~~~~~I~t~~fL-~a~~~l~~~~d~LG~-vFs~v~~Dv~~k 64 (218)
+..|++-++.+...|.+++=.-....|. +.-..+.|+..+.|+ .+.|.++=|.-+
T Consensus 15 ~qt~TdYgKDL~Ekvk~pElqsQakaYfektqeQltPlvkKagtdl~nflS~~v~~~ 71 (76)
T PF04711_consen 15 FQTVTDYGKDLVEKVKGPELQSQAKAYFEKTQEQLTPLVKKAGTDLMNFLSSFVELK 71 (76)
T ss_dssp HHHHHHHHHHHHHHHHSHHTSSTCHHHHHHHHHHHHHHHHGGHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhHHHHHHhHHHHHHHHHhhccc
Confidence 4556777777766554333233334454 555678899999998 889998766433
No 6
>PF13496 DUF4120: Domain of unknown function (DUF4120)
Probab=32.97 E-value=13 Score=28.08 Aligned_cols=13 Identities=38% Similarity=1.221 Sum_probs=10.4
Q ss_pred HHhhhccccchHH
Q 027852 134 YTQVFAPHHGWAI 146 (218)
Q Consensus 134 Y~~tL~~yH~W~v 146 (218)
+.-+|.|+|||.+
T Consensus 81 fav~~~pfhgw~i 93 (95)
T PF13496_consen 81 FAVMLGPFHGWSI 93 (95)
T ss_pred eEEEecCcccccc
Confidence 3467899999976
No 7
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=32.92 E-value=40 Score=19.73 Aligned_cols=28 Identities=14% Similarity=0.443 Sum_probs=20.6
Q ss_pred HHHHHHHHHhhhccCCCCcchHHHHHHHhHH
Q 027852 13 ISESFKELAATVNSQAADVELAAFSRACSYV 43 (218)
Q Consensus 13 ~~~~F~~~~~~v~~~~~~I~t~~fL~a~~~l 43 (218)
+...|+..- ...+|.|+.++|+.+++.+
T Consensus 2 ~~~~F~~~D---~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFD---KDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHS---TTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHC---CCCCCcCCHHHHHHHHHhC
Confidence 345666653 4678899999999988753
No 8
>PF02180 BH4: Bcl-2 homology region 4; InterPro: IPR003093 Apoptosis, or programmed cell death (PCD), is a common and evolutionarily conserved property of all metazoans []. In many biological processes, apoptosis is required to eliminate supernumerary or dangerous (such as pre-cancerous) cells and to promote normal development. Dysregulation of apoptosis can, therefore, contribute to the development of many major diseases including cancer, autoimmunity and neurodegenerative disorders. In most cases, proteins of the caspase family execute the genetic programme that leads to cell death. Bcl-2 proteins are central regulators of caspase activation, and play a key role in cell death by regulating the integrity of the mitochondrial and endoplasmic reticulum (ER) membranes []. At least 20 Bcl-2 proteins have been reported in mammals, and several others have been identified in viruses. Bcl-2 family proteins fall roughly into three subtypes, which either promote cell survival (anti-apoptotic) or trigger cell death (pro-apoptotic). All members contain at least one of four conserved motifs, termed Bcl-2 Homology (BH) domains. Bcl-2 subfamily proteins, which contain at least BH1 and BH2, promote cell survival by inhibiting the adapters needed for the activation of caspases. Pro-apoptotic members potentially exert their effects by displacing the adapters from the pro-survival proteins; these proteins belong either to the Bax subfamily, which contain BH1-BH3, or to the BH3 subfamily, which mostly only feature BH3 []. Thus, the balance between antagonistic family members is believed to play a role in determining cell fate. Members of the wider Bcl-2 family, which also includes Bcl-x, Bcl-w and Mcl-1, are described by their similarity to Bcl-2 protein, a member of the pro-survival Bcl-2 subfamily []. Full-length Bcl-2 proteins feature all four BH domains, seven alpha-helices, and a C-terminal hydrophobic motif that targets the protein to the outer mitochondrial membrane, ER and nuclear envelope. Active cell suicide (apoptosis) is induced by events such as growth factor withdrawal and toxins. It is controlled by regulators, which have either an inhibitory effect on programmed cell death (anti-apoptotic) or block the protective effect of inhibitors (pro-apoptotic) [, ]. Many viruses have found a way of countering defensive apoptosis by encoding their own anti-apoptosis genes preventing their target-cells from dying too soon. All proteins belonging to the Bcl-2 family [] contain either a BH1, BH2, BH3, or BH4 domain. All anti-apoptotic proteins contain BH1 and BH2 domains, some of them contain an additional N-terminal BH4 domain (Bcl-2, Bcl-x(L), Bcl-w), which is never seen in pro-apoptotic proteins, except for Bcl-x(S). On the other hand, all pro-apoptotic proteins contain a BH3 domain (except for Bad) necessary for dimerisation with other proteins of Bcl-2 family and crucial for their killing activity, some of them also contain BH1 and BH2 domains (Bax, Bak). The BH3 domain is also present in some anti-apoptotic protein, such as Bcl-2 or Bcl-x(L). Proteins that are known to contain these domains include vertebrate Bcl-2 (alpha and beta isoforms) and Bcl-x (isoforms (Bcl-x(L) and Bcl-x(S)); mammalian proteins Bax and Bak; mouse protein Bid; Xenopus laevis proteins Xr1 and Xr11; human induced myeloid leukemia cell differentiation protein MCL1 and Caenorhabditis elegans protein ced-9.; GO: 0042981 regulation of apoptosis; PDB: 1AF3_A 2PON_B 1YSN_A 3PL7_B 3R85_A 2O2N_A 2P1L_C 1R2G_A 2O1Y_A 1BXL_A ....
Probab=31.39 E-value=51 Score=19.60 Aligned_cols=16 Identities=25% Similarity=0.451 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHhhhh
Q 027852 193 FNFSFLLNNYILKKFH 208 (218)
Q Consensus 193 ~~~~~~~~~y~~~~~~ 208 (218)
.|.-.||+.||.++|-
T Consensus 3 ~~nR~lV~~yi~yKLs 18 (27)
T PF02180_consen 3 YDNRELVEDYISYKLS 18 (27)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhh
Confidence 4778899999999884
No 9
>PF09409 PUB: PUB domain; InterPro: IPR018997 The PUB (also known as PUG) domain is found in peptide N-glycanase where it functions as a AAA ATPase binding domain []. This domain is also found on other proteins linked to the ubiquitin-proteasome system. ; PDB: 2CM0_A 2CCQ_A 2D5U_A 2HPL_A 2HPJ_A.
Probab=28.76 E-value=1.1e+02 Score=22.11 Aligned_cols=40 Identities=15% Similarity=0.407 Sum_probs=31.1
Q ss_pred HHhhHHHHHHHHHHHHhcCC-CChh--HHHHHHHHhhhccccc
Q 027852 104 VKRGLDMVRVLFEQILAAEG-NSLK--DPASKAYTQVFAPHHG 143 (218)
Q Consensus 104 L~RaL~Fi~~fl~~l~~~~~-~~ls--~~a~~AY~~tL~~yH~ 143 (218)
..++++.+...+.+++..|+ ++.+ .....++.+.+.+++|
T Consensus 6 ~~~al~~L~~il~NI~~~P~~~kyR~Ir~~N~~f~~~i~~~~g 48 (87)
T PF09409_consen 6 FQKALETLEKILSNILSNPNEEKYRRIRLSNKTFQEKILPVPG 48 (87)
T ss_dssp HHHHHHHHHHHHHHHHHSTT-CGGGEEETTSHHHHHHTTTSTT
T ss_pred HHHHHHHHHHHHHHHccCCCcccceEeecCcchHHHHhcCChh
Confidence 46789999999999999874 3322 4566888888888888
No 10
>PF13959 DUF4217: Domain of unknown function (DUF4217)
Probab=19.61 E-value=64 Score=22.43 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=28.5
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHhhhccccch-HHHHHHHH
Q 027852 113 VLFEQILAAEGNSLKDPASKAYTQVFAPHHGW-AIRKAVAA 152 (218)
Q Consensus 113 ~fl~~l~~~~~~~ls~~a~~AY~~tL~~yH~W-~vR~a~~l 152 (218)
.-++.++.. +..+...|++||..-++-|+.- -.|.+|.+
T Consensus 4 ~~l~~~~~~-d~~l~~lA~~Af~SyvraY~~~~~~k~iF~~ 43 (65)
T PF13959_consen 4 QKLEKLVAK-DRELKELAQKAFVSYVRAYASHKELKDIFNV 43 (65)
T ss_pred HHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHhhhhhhCCc
Confidence 445666654 4779999999999988888877 56665543
Done!