BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027854
(218 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus
Pfu-264096-001
Length = 186
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 97/145 (66%), Gaps = 6/145 (4%)
Query: 34 AAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYP 93
++P+HDLE GP P V ++EI KG + KYELDK +GL+K+DRVLYS YP
Sbjct: 8 GSNPFHDLEPGPDVPEVVYA------IIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYP 61
Query: 94 HNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
+YG IPRT ED DP D++V+M+EPV P + + R IGL MID G+KD K++AV +D
Sbjct: 62 VDYGIIPRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVED 121
Query: 154 PEFRHYKDIKELPPHRLAEIRRFFE 178
P F+ +KDI ++P L EI FF+
Sbjct: 122 PYFKDWKDIDDVPKAFLDEIAHFFK 146
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|B Chain B, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|C Chain C, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
Length = 195
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 95/143 (66%), Gaps = 6/143 (4%)
Query: 36 HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHN 95
+P+HDLE GP P V ++EI KG + KYELDK +GL+K+DRVLY+ YP +
Sbjct: 19 NPFHDLEPGPNVPEVVYA------LIEIPKGSRNKYELDKETGLLKLDRVLYTPFHYPVD 72
Query: 96 YGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE 155
YG IPRT ED DP D++V+M+EP P + + R IGL MID G+KD K++AV +DP
Sbjct: 73 YGIIPRTWYEDGDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPY 132
Query: 156 FRHYKDIKELPPHRLAEIRRFFE 178
F+ +KDI ++P L EI FF+
Sbjct: 133 FKDWKDISDVPKAFLDEIAHFFK 155
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From
Thermococcus Thioreducens Bound To Hydrolyzed Product At
0.99 Angstrom Resolution
Length = 178
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 96/143 (67%), Gaps = 6/143 (4%)
Query: 36 HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHN 95
+P+H+LE GP P V ++EI KG + KYELDKA+GL+K+DRVLYS YP +
Sbjct: 2 NPFHELEPGPEVPEVVYA------LIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVD 55
Query: 96 YGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE 155
YG IP+T +D DP D++V+M+EPV P + + R IG+M M D G+KD K++AV +DP
Sbjct: 56 YGIIPQTWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPY 115
Query: 156 FRHYKDIKELPPHRLAEIRRFFE 178
F +KDI ++P L EI FF+
Sbjct: 116 FNDWKDISDVPKAFLDEIAHFFQ 138
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|B Chain B, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|C Chain C, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|D Chain D, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|E Chain E, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|F Chain F, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3Q4W|A Chain A, The Structure Of Archaeal Inorganic Pyrophosphatase In
Complex With Substrate
pdb|3Q5V|A Chain A, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q5V|B Chain B, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q9M|A Chain A, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|B Chain B, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|C Chain C, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q3L|A Chain A, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|B Chain B, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|C Chain C, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|D Chain D, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|E Chain E, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|F Chain F, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3R5U|A Chain A, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5U|B Chain B, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5V|A Chain A, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|B Chain B, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|C Chain C, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|D Chain D, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|E Chain E, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|F Chain F, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
Length = 178
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 95/143 (66%), Gaps = 6/143 (4%)
Query: 36 HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHN 95
+P+H+LE GP P V ++EI KG + KYELDK +GL+K+DRVLYS YP +
Sbjct: 2 NPFHELEPGPEVPEVVYA------LIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVD 55
Query: 96 YGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE 155
YG IP+T +D DP D++V+M+EPV P + + R IG+M M D G+KD K++AV +DP
Sbjct: 56 YGIIPQTWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPY 115
Query: 156 FRHYKDIKELPPHRLAEIRRFFE 178
F +KDI ++P L EI FF+
Sbjct: 116 FNDWKDISDVPKAFLDEIAHFFQ 138
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|B Chain B, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|C Chain C, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|D Chain D, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|E Chain E, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|F Chain F, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
Length = 178
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 91/143 (63%), Gaps = 6/143 (4%)
Query: 36 HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHN 95
+P+H+LE GP P V ++EI KG + KYELDK +GL+K+DRVLYS YP +
Sbjct: 2 NPFHELEPGPEVPEVVYA------LIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVD 55
Query: 96 YGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE 155
YG IP+T +D DP D+ V+ +EPV P + + R IG+ D G+KD K++AV +DP
Sbjct: 56 YGIIPQTWYDDGDPFDIXVIXREPVYPLTIIEARPIGIXKXEDSGDKDWKVLAVPVEDPY 115
Query: 156 FRHYKDIKELPPHRLAEIRRFFE 178
F +KDI ++P L EI FF+
Sbjct: 116 FNDWKDISDVPKAFLDEIAHFFQ 138
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|B Chain B, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|C Chain C, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|D Chain D, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|E Chain E, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|F Chain F, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase
Length = 173
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 86/140 (61%), Gaps = 8/140 (5%)
Query: 41 LEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIP 100
L G AP V N +VEI +G +KYE D G+IKVDRVLY+S+ YP NYGFIP
Sbjct: 3 LSPGKNAPDVVNV------LVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIP 56
Query: 101 RTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRH 158
T+ ED DP+DVLV+ + PGS + R IG++ M D+ +D KI+AV D DP F +
Sbjct: 57 GTLEEDGDPLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSN 116
Query: 159 YKDIKELPPHRLAEIRRFFE 178
KDI +LP +I FFE
Sbjct: 117 IKDINDLPQATKNKIVHFFE 136
>pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|B Chain B, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|C Chain C, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
Length = 169
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 77/118 (65%)
Query: 60 VVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEP 119
+EI KG + KYE+D +G +++DR LY+ + YP +YGFI T+ +D DP+D LVL+ +P
Sbjct: 13 TIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQP 72
Query: 120 VLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFF 177
V PG + R +G+ M+D+ DDK++ V A DP + H +DI ++P L I+ FF
Sbjct: 73 VFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFF 130
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
pdb|2BQY|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
Length = 173
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Query: 50 VCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 109
V + SL V+EI K +KYELDK SG + VDRVLY + YP NYGF+P T+ D DP
Sbjct: 8 VSHDADSLCVVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDP 67
Query: 110 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPP 167
+D LVL GS ++ R +G++ M D+ D+K+IA+ D DP + KDI +L
Sbjct: 68 VDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSK 127
Query: 168 HRLAEIRRFFE 178
H L +I+ FFE
Sbjct: 128 HTLDKIKHFFE 138
>pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0
Length = 172
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 77/118 (65%)
Query: 60 VVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEP 119
+EI KG + KYE+D +G +++DR LY+ + YP +YGFI T+ +D DP+D LVL+ +P
Sbjct: 16 TIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQP 75
Query: 120 VLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFF 177
V PG + R +G+ M+D+ DDK++ V A DP + H +DI ++P L I+ FF
Sbjct: 76 VFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFF 133
>pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0
Length = 171
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 77/118 (65%)
Query: 60 VVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEP 119
+EI KG + KYE+D +G +++DR LY+ + YP +YGFI T+ +D DP+D LVL+ +P
Sbjct: 15 TIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQP 74
Query: 120 VLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFF 177
V PG + R +G+ M+D+ DDK++ V A DP + H +DI ++P L I+ FF
Sbjct: 75 VFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFF 132
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
Length = 173
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 79/131 (60%), Gaps = 2/131 (1%)
Query: 50 VCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 109
V + SL V+EI K +KYELDK SG + VDRVLY + YP NYGF+P T+ D DP
Sbjct: 8 VSHDADSLCVVIEISKHSNIKYELDKESGALXVDRVLYGAQNYPANYGFVPNTLGSDGDP 67
Query: 110 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPP 167
+D LVL GS ++ R +G++ D+ D+K+IA+ D DP + KDI +L
Sbjct: 68 VDALVLSDVAFQAGSVVKARLVGVLNXEDESGXDEKLIALPIDKIDPTHSYVKDIDDLSK 127
Query: 168 HRLAEIRRFFE 178
H L +I+ FFE
Sbjct: 128 HTLDKIKHFFE 138
>pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
Length = 180
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 52 NCCKSLRQVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPM 110
N + + +VE+ GG+ +KYE+DK SG + VDR LY+S+VYP NYGF+P T+ ED DP+
Sbjct: 15 NPPEDVNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSMVYPGNYGFVPHTLSEDGDPI 74
Query: 111 DVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD--PEFRHYKDIKELPPH 168
DVL+ P+LPG + IG + M D G KD+KIIA+ + + D +LP
Sbjct: 75 DVLICNTRPLLPGCVINVYPIGALIMEDDGGKDEKIIAIPTPKLTQRYNNIHDYTDLPEI 134
Query: 169 RLAEIRRFFE 178
L +I FFE
Sbjct: 135 TLKQIEHFFE 144
>pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
pdb|4ECP|B Chain B, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
Length = 167
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 74/118 (62%)
Query: 60 VVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEP 119
+EI KG + KYE+D +G +++DR LY+ + YP +YGFI T+ ED DP+D LVL+ EP
Sbjct: 11 TIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALVLLPEP 70
Query: 120 VLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFF 177
+ PG + R +G+ M+D+ DDK++ V +D + H I ++P L I+ FF
Sbjct: 71 LFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFELDAIKHFF 128
>pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|C Chain C, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|D Chain D, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|E Chain E, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|F Chain F, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|G Chain G, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|H Chain H, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|I Chain I, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|J Chain J, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|K Chain K, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|L Chain L, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
Length = 197
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 51 CNCCKSLRQVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDP 109
N + + ++E+ GG+ +KYE+DK +G + VDR LY+ + YP NYGF+P T+ ED DP
Sbjct: 31 SNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDP 90
Query: 110 MDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYK--DIKELPP 167
+DVLV P++PG + R IG++ M D KD+KIIAV + R+ K D ++P
Sbjct: 91 IDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPE 150
Query: 168 HRLAEIRRFFE 178
L +I FFE
Sbjct: 151 ITLKQIAHFFE 161
>pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3EMJ|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|G Chain G, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|H Chain H, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|I Chain I, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|J Chain J, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|K Chain K, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|L Chain L, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
Length = 173
Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 67 GKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFL 126
G +KYE DK SG + VDR + +++ YP NYGFIP T+ D DP+DVLV+ PV+PGS +
Sbjct: 27 GPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVI 86
Query: 127 RCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFE 178
+CRAIG++ M D+ D+KIIAV D F H K++ +L I FFE
Sbjct: 87 KCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFE 140
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3EIY|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound Pyrophosphate
pdb|3EIZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei, H32 Crystal Form
pdb|3EJ0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound
N-(Pyridin-3-Ylmethyl) Aniline, H32 Crystal Form
pdb|3EJ2|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound 5-Amino-1-(4-
Chlorophenyl)-1h-Pyrazole-4-Carbonitrile, H32 Crystal
Form
pdb|3GVF|A Chain A, 1.7 Angstrom Crystal Structure Of Inorganic
Pyrophosphatase From Burkholderia Pseudomallei Bound
With Phosphate
Length = 196
Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Query: 44 GPGA------PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNY 96
GPG+ PA + + ++EI + VKYE DKA GL+ VDR + + + YP NY
Sbjct: 18 GPGSMSFSNVPAGKDLPQDFNVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNY 77
Query: 97 GFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD--P 154
GFIP+T+ D DP+DVLV+ P+L GS +R RA+G++ M D+ D K++AV D P
Sbjct: 78 GFIPQTLSGDGDPVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCP 137
Query: 155 EFRHYKDIKELPPHRLAEIRRFFE 178
+ K I ++P + +I+ FFE
Sbjct: 138 MTANLKSIDDVPAYLKDQIKHFFE 161
>pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Thermus Thermophilus
Length = 174
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
Query: 41 LEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIP 100
L +G AP V + V+E+ +G KYE D G IK+DRVL + YP +YGFIP
Sbjct: 6 LPVGDKAPEVVHM------VIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIP 59
Query: 101 RTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYK 160
T+ ED DP+D LVL P+LPG + R +GL+ M D+ D K+I V A+D H +
Sbjct: 60 STLAEDGDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQ 119
Query: 161 DIKELPPHRLAEIRRFFE 178
DI ++P EI+ FFE
Sbjct: 120 DIGDVPEGVKQEIQHFFE 137
>pdb|2EIP|A Chain A, Inorganic Pyrophosphatase
pdb|2EIP|B Chain B, Inorganic Pyrophosphatase
pdb|1IPW|A Chain A, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1IPW|B Chain B, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1JFD|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1JFD|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1FAJ|A Chain A, Inorganic Pyrophosphatase
pdb|1INO|A Chain A, Recombinant Inorganic Pyrophosphatase From Escherichia
Coli
Length = 175
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Query: 48 PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED 106
PA + + + V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ D
Sbjct: 6 PAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLD 65
Query: 107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV--CADDPEFRHYKDIKE 164
DP+DVLV P+ PGS +RCR +G++ M D+ +D K++AV E+ H KD+ +
Sbjct: 66 GDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVND 125
Query: 165 LPPHRLAEIRRFFE 178
LP A+I FFE
Sbjct: 126 LPELLKAQIAHFFE 139
>pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|C Chain C, Structure Of Inorganic Pyrophosphatase
pdb|1I6T|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1I40|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|2AU6|A Chain A, Crystal Structure Of Catalytic Intermediate Of Inorganic
Pyrophosphatase
pdb|2AU8|A Chain A, Catalytic Intermediate Structure Of Inorganic
Pyrophosphatase
pdb|2AU9|A Chain A, Inorganic Pyrophosphatase Complexed With Substrate
pdb|2AUU|A Chain A, Inorganic Pyrophosphatase Complexed With Magnesium
Pyrophosphate And Fluoride
pdb|1IGP|A Chain A, X-Ray Crystallographic Studies Of Recombinant Inorganic
Pyrophosphatase From Escherichia Coli
Length = 175
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 3/134 (2%)
Query: 48 PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED 106
PA + + + V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ D
Sbjct: 6 PAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLD 65
Query: 107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV--CADDPEFRHYKDIKE 164
DP+DVLV P+ PGS RCR +G++ M D+ +D K++AV E+ H KD+ +
Sbjct: 66 GDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVND 125
Query: 165 LPPHRLAEIRRFFE 178
LP A+I FFE
Sbjct: 126 LPELLKAQIAHFFE 139
>pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n
Length = 175
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Query: 48 PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED 106
PA + + + V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ D
Sbjct: 6 PAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLD 65
Query: 107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV--CADDPEFRHYKDIKE 164
DP+DVLV P+ PGS +RCR +G++ M ++ +D K++AV E+ H KD+ +
Sbjct: 66 GDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTNEAGEDAKLVAVPHSKLSKEYDHIKDVND 125
Query: 165 LPPHRLAEIRRFFE 178
LP A+I FFE
Sbjct: 126 LPELLKAQIAHFFE 139
>pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n
pdb|1MJW|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D42n
Length = 175
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Query: 48 PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED 106
PA + + + V+EI +KYE+DK SG + V+R + +++ YP NYG+I T+ D
Sbjct: 6 PAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVNRFMSTAMFYPCNYGYINHTLSLD 65
Query: 107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV--CADDPEFRHYKDIKE 164
DP+DVLV P+ PGS +RCR +G++ M D+ +D K++AV E+ H KD+ +
Sbjct: 66 GDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVND 125
Query: 165 LPPHRLAEIRRFFE 178
LP A+I FFE
Sbjct: 126 LPELLKAQIAHFFE 139
>pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n
pdb|1MJX|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D65n
Length = 175
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Query: 48 PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED 106
PA + + + V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ +
Sbjct: 6 PAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLN 65
Query: 107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV--CADDPEFRHYKDIKE 164
DP+DVLV P+ PGS +RCR +G++ M D+ +D K++AV E+ H KD+ +
Sbjct: 66 GDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVND 125
Query: 165 LPPHRLAEIRRFFE 178
LP A+I FFE
Sbjct: 126 LPELLKAQIAHFFE 139
>pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic
Pyrophosphatase
Length = 175
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 3/134 (2%)
Query: 48 PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED 106
PA + + + V+EI +KYE+DK SG + VD+ + +++ YP NYG+I T+ D
Sbjct: 6 PAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHTLSLD 65
Query: 107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV--CADDPEFRHYKDIKE 164
DP+DVLV P+ PGS RCR +G++ M D+ +D K++AV E+ H KD+ +
Sbjct: 66 GDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVND 125
Query: 165 LPPHRLAEIRRFFE 178
LP A+I FFE
Sbjct: 126 LPELLKAQIAHFFE 139
>pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n
pdb|1MJY|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D70n
Length = 175
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 80/134 (59%), Gaps = 3/134 (2%)
Query: 48 PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED 106
PA + + + V+EI +KYE+DK SG + VDR + +++ YP NYG+I T+ D
Sbjct: 6 PAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLD 65
Query: 107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV--CADDPEFRHYKDIKE 164
DP++VLV P+ PGS RCR +G++ M D+ +D K++AV E+ H KD+ +
Sbjct: 66 GDPVNVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVND 125
Query: 165 LPPHRLAEIRRFFE 178
LP A+I FFE
Sbjct: 126 LPELLKAQIAHFFE 139
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
pdb|3LD3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
Length = 199
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 7/139 (5%)
Query: 42 EIGPGAPAVCNCCKSLRQVVEIGKGG-KVKYELDKASGLIKVDRVLYSSVVYPHNYGFIP 100
+IG G+ N + + V+E+ + VKYE D+ +G + VDR L +++ YP NYGFIP
Sbjct: 26 DIGSGS----NAPEEVNVVIEVSQDSHPVKYEFDEKNGALWVDRFLPTAMYYPCNYGFIP 81
Query: 101 RTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRH 158
TI D DP+DVLVL + PV+PG+ + R +G++ M D+ +D K++AV A D + +
Sbjct: 82 NTIAGDGDPVDVLVLARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGN 141
Query: 159 YKDIKELPPHRLAEIRRFF 177
+ +LP L I FF
Sbjct: 142 IVNYSDLPSSFLDSISHFF 160
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Ehrlichia Chaffeensis
Length = 193
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 44 GPGAPAVCNCC------KSLRQVVEIGKGG-KVKYELDKASGLIKVDRVLYSSVVYPHNY 96
GPG+ + N K + ++EI + VKYE DK L VDR L +S+ YP NY
Sbjct: 18 GPGSMNLDNVTGGDNVPKEINVIIEISQNSCPVKYEFDKEKNLFCVDRFLPTSMYYPCNY 77
Query: 97 GFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DP 154
GFIP T D DP+DVLV + PV+ G+ +R R +G++ M D+ +D KI+AV D
Sbjct: 78 GFIPHTCAGDGDPVDVLVASRFPVMSGAVIRARPVGVLVMHDESGEDVKILAVPTHKVDQ 137
Query: 155 EFRHYKDIKELPPHRLAEIRRFF 177
+ + KD + P L I FF
Sbjct: 138 YYNNIKDYSDFPVSFLNSISHFF 160
>pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|B Chain B, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|C Chain C, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|D Chain D, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|E Chain E, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|F Chain F, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
Length = 178
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 70/125 (56%), Gaps = 9/125 (7%)
Query: 60 VVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQE 118
++EI GG+VKYE DK G + VDR +S YP NYGF+P T+ +D DP+DVLVL
Sbjct: 20 IIEIPANGGEVKYEYDKELGFLTVDRFXPTSXRYPCNYGFVPSTLAQDGDPLDVLVLTPV 79
Query: 119 PVLPGSFLRCRAIGLMPMIDQGEKDDKIIAV-----CADDPEFRHYKDIKELPPHRLAEI 173
PV PG R RA+G+ D+ +D K++AV C + KDI L L I
Sbjct: 80 PVQPGVLXRVRALGIXKXEDEAGEDSKVLAVPVVKACRAYEAIQSLKDISSL---LLDAI 136
Query: 174 RRFFE 178
FFE
Sbjct: 137 SHFFE 141
>pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The
Oil- Degrading Bacterium Oleispira Antarctica
Length = 176
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Query: 48 PAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICED 106
PA + + +EI +KYE+DK + VDR + YP NYG+I T+ +D
Sbjct: 8 PAGKDLPNDIYVAIEIPANASPIKYEIDKDXDALLVDRFXATPXFYPANYGYINNTLADD 67
Query: 107 SDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE--FRHYKDIKE 164
D +DVLV+ PV PGS +R R +G++ D+ D+K++AV + + DI +
Sbjct: 68 GDALDVLVITPYPVAPGSVIRARPVGVLKXSDEAGGDEKLLAVPHEKLTQLYNDIHDIDD 127
Query: 165 LPPHRLAEIRRFFE 178
+P +I FFE
Sbjct: 128 VPQLLKDQIVHFFE 141
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase
pdb|1YPP|B Chain B, Acid Anhydride Hydrolase
Length = 286
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D A G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTAKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|8PRK|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
Length = 287
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G +K R + Y HNYG P+T +
Sbjct: 44 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLKFVRNCFPHHGYIHNYGAFPQTWED 103
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 104 PNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 163
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 164 PLAPKLNDIEDVEKYFPGLLRATNEWF 190
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGI|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1E6A|A Chain A, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|1E6A|B Chain B, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|2IHP|A Chain A, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|2IHP|B Chain B, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|1E9G|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1E9G|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 286
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1M38|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 287
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 44 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 103
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 104 PNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 163
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 164 PLAPKLNDIEDVEKYFPGLLRATNEWF 190
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUK|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUJ|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITREETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
pdb|2IK0|B Chain B, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
Length = 286
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 15/119 (12%)
Query: 74 DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE------------DSDPMDVLVLMQEPVL 121
D G ++ R + Y HNYG P+T + D+DP+DVL + +
Sbjct: 71 DTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETKAVGDNDPIDVLEIGETIAY 130
Query: 122 PGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD---PEFRHYKDIKELPPHRLAEIRRFF 177
G + +A+G+M ++D+GE D K+IA+ +D P+ +D+++ P L +F
Sbjct: 131 TGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
pdb|2IK1|B Chain B, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
Length = 286
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HN+G P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNFGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
pdb|2IK7|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
Length = 286
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP++VL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNDPINVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|117E|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|2IK4|A Chain A, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
pdb|2IK4|B Chain B, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
Length = 286
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D++P+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNEPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
pdb|2IK6|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
Length = 286
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP++VL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNDPIEVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
pdb|2IK9|B Chain B, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
Length = 286
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
D+DP+DVL + + G + +A+G+M ++D+GE + K+IA+ +D
Sbjct: 103 PNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETEWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
pdb|2IK2|B Chain B, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
Length = 286
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 57 LRQVVEIGKGGKVKYEL-----------DKASGLIKVDRVLYSSVVYPHNYGFIPRTICE 105
VVEI + K E+ D G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWED 102
Query: 106 ------------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
++DP+DVL + + G + +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 PNVSHPETKAVGENDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDIND 162
Query: 154 ---PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 PLAPKLNDIEDVEKYFPGLLRATNEWF 189
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
pdb|1PYP|B Chain B, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
Length = 285
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 25/146 (17%)
Query: 57 LRQVVEIGKGGKVKYELDK----------ASGLIKVDRVLYSSVVYPHNYGFIPRTICE- 105
VVEI + K E+ K G ++ R + Y HNYG P+T +
Sbjct: 43 FNMVVEIPRWTNAKLEITKEETLNPIIQNTKGKLRFVRNCFPHHGYIHNYGAFPQTWEDP 102
Query: 106 -----------DSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD- 153
D++P+DVL + + G +A+G+M ++D+GE D K+IA+ +D
Sbjct: 103 NVSHPETKAVGDNNPIDVLQIGETIAYTGQVKEVKALGIMALLDEGETDWKVIAIDINDP 162
Query: 154 --PEFRHYKDIKELPPHRLAEIRRFF 177
P+ +D+++ P L +F
Sbjct: 163 LAPKLNDIEDVEKYFPGLLRATDEWF 188
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,027,574
Number of Sequences: 62578
Number of extensions: 291370
Number of successful extensions: 749
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 678
Number of HSP's gapped (non-prelim): 42
length of query: 218
length of database: 14,973,337
effective HSP length: 95
effective length of query: 123
effective length of database: 9,028,427
effective search space: 1110496521
effective search space used: 1110496521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)