Query 027854
Match_columns 218
No_of_seqs 139 out of 966
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 03:06:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027854.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027854hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q46_A TT-ippase; inorganic py 100.0 1.4E-66 4.8E-71 439.4 14.1 161 35-204 1-161 (178)
2 1e9g_A Ppase, inorganic pyroph 100.0 3.7E-66 1.3E-70 463.4 8.9 188 9-204 2-217 (286)
3 2prd_A Pyrophosphate phosphohy 100.0 2.8E-64 9.5E-69 424.0 15.7 160 36-204 1-163 (174)
4 3gvf_A Inorganic pyrophosphata 100.0 1.3E-63 4.6E-68 426.6 16.5 166 29-203 15-184 (196)
5 3fq3_A Inorganic pyrophosphata 100.0 3.4E-63 1.2E-67 424.3 17.1 167 29-204 15-185 (197)
6 3ld3_A Inorganic pyrophosphata 100.0 4.2E-63 1.4E-67 424.4 15.6 168 29-204 15-185 (199)
7 2au7_A Inorganic pyrophosphata 100.0 1.9E-62 6.4E-67 413.3 17.1 158 37-203 1-162 (175)
8 3d53_A Inorganic pyrophosphata 100.0 5.3E-62 1.8E-66 410.0 16.7 158 37-204 3-164 (173)
9 2bqx_A Inorganic pyrophosphata 100.0 1.6E-61 5.4E-66 406.9 16.1 157 37-203 2-161 (173)
10 3tr4_A Inorganic pyrophosphata 100.0 1.5E-60 5.1E-65 402.7 15.4 156 39-204 6-165 (178)
11 1qez_A Ppase, S-ppase, protein 100.0 1.1E-59 3.6E-64 395.9 16.8 156 40-204 2-160 (173)
12 1sxv_A Inorganic pyrophosphata 100.0 1.1E-58 3.7E-63 389.5 11.7 147 49-204 11-158 (172)
13 1jo6_A KCNMB2, potassium large 32.7 4.8 0.00017 26.7 -1.4 21 92-112 2-33 (45)
14 2yue_A Protein neuralized; str 31.5 59 0.002 26.3 4.7 46 111-167 36-84 (168)
15 3goe_A DNA repair protein RAD6 24.5 48 0.0017 24.4 2.6 21 88-114 61-81 (82)
16 2l76_A Nfatc2-interacting prot 24.3 55 0.0019 24.6 3.0 61 48-117 19-94 (95)
17 2cqg_A TDP-43, TAR DNA-binding 23.3 8.5 0.00029 27.0 -1.6 44 169-212 28-80 (103)
18 2ela_A Adapter protein contain 23.0 53 0.0018 26.4 2.9 33 95-138 11-43 (175)
19 1x5s_A Cold-inducible RNA-bind 20.0 25 0.00085 24.3 0.3 38 169-206 25-71 (102)
No 1
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A
Probab=100.00 E-value=1.4e-66 Score=439.41 Aligned_cols=161 Identities=43% Similarity=0.751 Sum_probs=152.7
Q ss_pred cCcCCCCCCCCCCCceeeccCCCceEEEECCCCCceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCCCcceEEE
Q 027854 35 AHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLV 114 (218)
Q Consensus 35 ~spwHdipl~~~~p~~~n~~~~~~~VIEIPrgs~~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDgDPLDVlv 114 (218)
+|||||||++.+.|.+||| ||||||||++|||+|+++|.|++||++++++.||+|||||||||++|||||||||
T Consensus 1 ~spwhdi~~g~~~p~~~nv------vIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlv 74 (178)
T 3q46_A 1 MNPFHELEPGPEVPEVVYA------LIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMV 74 (178)
T ss_dssp CCTTTTSCSCSBTTTBCCC------EEEECTTCCEEEEECTTTSCEEEEEECSSSCCCSSEEEECTTCCBTTTBCCEEEE
T ss_pred CCccccCCCCCCCCCEEEE------EEEECCCCCeeEEECCCCCCEEEeecccCCCCCCcccccCCCccCCCCCeeEEEE
Confidence 5899999999988999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccCCcceEEEEEeeeEEeEeCCCCceEEEEEecCCccccCCCCCCCCChhHHHHHHHHHHHhhccCCCcceeehhh
Q 027854 115 LMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDCIHSFVFIILSYSLI 194 (218)
Q Consensus 115 L~~~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~~~~~~~~~~ 194 (218)
|+++|+.||++++|||||+|+|+|+||+|||||||+++||+|++|+|++|||++++++|+|||++||.||||.++.++
T Consensus 75 l~~~~~~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~~~g-- 152 (178)
T 3q46_A 75 IMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKTTKIEG-- 152 (178)
T ss_dssp CCSSCCCTTCBC-CEEEEEEEEEETTEECCEEEEECTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEEE--
T ss_pred EcCCCCCCceEEEEEEEEEEEeecCCCccceEEEeeCCCccccccCChHHCCHHHHHHHHHHHHHhcCcCCCceEecc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred hhccccceee
Q 027854 195 DYLSQHSAVS 204 (218)
Q Consensus 195 ~y~~~~~a~~ 204 (218)
+.++..|..
T Consensus 153 -~~~~~~A~~ 161 (178)
T 3q46_A 153 -WGNAEEAKR 161 (178)
T ss_dssp -EEEHHHHHH
T ss_pred -ccCHHHHHH
Confidence 445555543
No 2
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A
Probab=100.00 E-value=3.7e-66 Score=463.39 Aligned_cols=188 Identities=24% Similarity=0.355 Sum_probs=176.5
Q ss_pred CccCCCCCCCCcceeeeecccCCCcccCcCCCCCCCCCCC-ceeeccCCCceEEEECCCCCceEEEecCC----------
Q 027854 9 GSNNSGGPPVALNERILSSMSHRSVAAHPWHDLEIGPGAP-AVCNCCKSLRQVVEIGKGGKVKYELDKAS---------- 77 (218)
Q Consensus 9 ~~~~~~g~~~~~~~r~~~~~~~~~~~~spwHdipl~~~~p-~~~n~~~~~~~VIEIPrgs~~KyEidk~~---------- 77 (218)
.+..++|+++|++||+|+. ..|+.+|||||||++++.+ .+||| ||||||||++|||+|+++
T Consensus 2 y~~~~~G~~~t~~~r~~~~--~~g~~~sp~hdIp~~~~~~~~~~nv------VIEIP~gs~~KyEidk~~~~nPIkqd~k 73 (286)
T 1e9g_A 2 YTTRQIGAKNTLEYKVYIE--KDGKPVSAFHDIPLYADKENNIFNM------VVEIPRWTNAKLEITKEETLNPIIQDTK 73 (286)
T ss_dssp EEEEEEEETTSTTCEEEEE--ETTEEECTTTTSCSEEETTTTEEEE------EEEECTTCCBCEEECTTSTTCCEEECEE
T ss_pred ceeeeecCCCCcceEEEEE--eCCeecCchhhCCCCCCCCCCEEEE------EEEECCCCCeEEEEccCCCCCcchhhhc
Confidence 4567889999999999964 4699999999999998864 89999 999999999999999997
Q ss_pred -CCeEEeEecccCCCCcCccccccccc------------CCCCCcceEEEecCcccCCcceEEEEEeeeEEeEeCCCCce
Q 027854 78 -GLIKVDRVLYSSVVYPHNYGFIPRTI------------CEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDD 144 (218)
Q Consensus 78 -g~i~~DR~l~~~~~yP~NYGfIPqT~------------~gDgDPLDVlvL~~~p~~~G~vv~vrviG~L~miD~gE~D~ 144 (218)
|.+++||.+++++.|||||||||||| +|||||||||||+++|+.+|++++|||||+|+|+|+||+||
T Consensus 74 ~G~lr~dr~l~~~~~YP~NYGfIPqTledp~~~~~~t~~~gDgDPLDVlvi~~~p~~pG~vi~vr~IGvl~MiDege~D~ 153 (286)
T 1e9g_A 74 KGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDW 153 (286)
T ss_dssp TTEECBCCEETTCCSCSSEEEECSSCCCCTTSEETTTTEEBCSSCCEEEECCSSCCCTTCEEEEEEEEEECEEETTEECC
T ss_pred CCcEEEEeccCCCCCCccCcccCcccccCcccccccCCCCCCCCceEEEEecCccCCCccEEEEEEeEEEEeccCCCCCc
Confidence 67778899999999999999999999 89999999999999999999999999999999999999999
Q ss_pred EEEEEecCCccccCCCCCCCCCh---hHHHHHHHHHHHhhccCCCcceeehh-hhhccccceee
Q 027854 145 KIIAVCADDPEFRHYKDIKELPP---HRLAEIRRFFEDCIHSFVFIILSYSL-IDYLSQHSAVS 204 (218)
Q Consensus 145 KIIaV~~~Dp~~~~i~di~Dl~~---~~l~~i~~fF~~YK~le~~~~~~~~~-~~y~~~~~a~~ 204 (218)
|||||+++||+|++|+||+||++ +++++|+|||++||.++||++|+|.+ +.+.++..|..
T Consensus 154 KIIaV~~~Dp~~~~i~di~Dl~~~~p~~l~~i~~fF~~YK~leGK~~n~~~~~~~~~~~~~A~~ 217 (286)
T 1e9g_A 154 KVIAIDINDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPENQFAFSGEAKNKKYALD 217 (286)
T ss_dssp EEEEEETTSTTGGGCCSHHHHHHHSTTHHHHHHHHHHHTTGGGTCCCCEEGGGGCCBCHHHHHH
T ss_pred eEEEEeCCCcccccCCCHHHhchhhHHHHHHHHHHHHHhcCcCCCCcceeEecCcCCCHHHHHH
Confidence 99999999999999999999987 89999999999999999999999998 68988888764
No 3
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1
Probab=100.00 E-value=2.8e-64 Score=424.02 Aligned_cols=160 Identities=38% Similarity=0.623 Sum_probs=151.7
Q ss_pred CcCCCCCCCCCCCceeeccCCCceEEEECCCCCceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCCCcceEEEe
Q 027854 36 HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVL 115 (218)
Q Consensus 36 spwHdipl~~~~p~~~n~~~~~~~VIEIPrgs~~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDgDPLDVlvL 115 (218)
||||+||++++.|..||| ||||||||++|||+|+++|.|++||++++++.||+|||||||||+|||||||||||
T Consensus 1 ~~~h~ip~~~~~p~~~nv------vIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl 74 (174)
T 2prd_A 1 ANLKSLPVGDKAPEVVHM------VIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIPSTLAEDGDPLDGLVL 74 (174)
T ss_dssp CCGGGSCCCTTTTTEEEE------EEEECTTCCEEEEEETTTTEEEEEEECSSSCCCSSEEEECSSCCCTTSSCCEEEEE
T ss_pred CCcccCCCCCCCCCEEEE------EEEecCCCCeEEEEecCCCCEEEeeecCCCCcCCcccccccCcccCCCCceEEEEE
Confidence 799999999998999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCcceEEEEEeeeEEeEeCCCCceEEEEEecCCccccCCCCCCCCChhHHHHHHHHHHHhhccC---CCcceeeh
Q 027854 116 MQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF---VFIILSYS 192 (218)
Q Consensus 116 ~~~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le---~~~~~~~~ 192 (218)
+++|+.||++++||+||+|+|+|+||+|||||||+++||+|++|+|++|||++++++|+|||++||.|| ||.+.
T Consensus 75 ~~~p~~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~k~gK~v~--- 151 (174)
T 2prd_A 75 STYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVPEGVKQEIQHFFETYKALEAKKGKWVK--- 151 (174)
T ss_dssp CSSCCCTTCEEEEEEEEEEEEEESSCEEEEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGGGGTCCEE---
T ss_pred CCCCCCCceEEEEEEEEEEEEecCCCCccEEEEEECCCcchhhcCChHHCCHHHHHHHHHHHHHhcCccccCCCceE---
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 66653
Q ss_pred hhhhccccceee
Q 027854 193 LIDYLSQHSAVS 204 (218)
Q Consensus 193 ~~~y~~~~~a~~ 204 (218)
...+.++..|..
T Consensus 152 ~~gw~~~~~A~~ 163 (174)
T 2prd_A 152 VTGWRDRKAALE 163 (174)
T ss_dssp EEEEECHHHHHH
T ss_pred ECcccCHHHHHH
Confidence 345666666654
No 4
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A*
Probab=100.00 E-value=1.3e-63 Score=426.57 Aligned_cols=166 Identities=34% Similarity=0.554 Sum_probs=149.2
Q ss_pred cCCCcccCcCCCCCCCCCCCceeeccCCCceEEEECCCCC-ceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCC
Q 027854 29 SHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 107 (218)
Q Consensus 29 ~~~~~~~spwHdipl~~~~p~~~n~~~~~~~VIEIPrgs~-~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDg 107 (218)
+.+|+++++||+||++++.|++||+ ||||||||+ +|||+|+++|.|++||++++++.||+|||||||||+|||
T Consensus 15 ~~~g~~~m~~~~i~~g~~~p~~vnv------vIEIP~gs~~~KyE~dk~~g~i~~DR~l~s~~~YP~NYGfIP~Tl~~Dg 88 (196)
T 3gvf_A 15 QTQGPGSMSFSNVPAGKDLPQDFNV------IIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQTLSGDG 88 (196)
T ss_dssp --------CGGGSCSCSBTTTBEEE------EEEECTTCCSEEEEEETTTTEEEEEEECTTCCCCSSEEEECTTCCCTTS
T ss_pred cccCCCCCchhhCCCCCCCCCEEEE------EEEecCCCCceEEEEecCCCCEEEEeEcCCCccCCcccccccCccCCCC
Confidence 4589999999999999999999999 999999998 999999999999999999999999999999999999999
Q ss_pred CcceEEEecCcccCCcceEEEEEeeeEEeEeCCCCceEEEEEecCC--ccccCCCCCCCCChhHHHHHHHHHHHhhccC-
Q 027854 108 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD--PEFRHYKDIKELPPHRLAEIRRFFEDCIHSF- 184 (218)
Q Consensus 108 DPLDVlvL~~~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~D--p~~~~i~di~Dl~~~~l~~i~~fF~~YK~le- 184 (218)
||||||||+++|+.||++++|||||+|+|+|+||+|||||||+++| |+|++|+|++|||++++++|+|||++||.||
T Consensus 89 DPLDvlvl~~~p~~pG~vi~~r~iGvl~M~Dege~D~KIIaVp~~d~~p~~~~i~di~dlp~~~l~~I~~fF~~YK~le~ 168 (196)
T 3gvf_A 89 DPVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVPAYLKDQIKHFFEQYKALEK 168 (196)
T ss_dssp SCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTST
T ss_pred CceEEEEecCCccCCeeEEEEEEEEEEEEecCCCcccEEEEEecCCcCchhhhcCchhhCCHHHHHHHHHHHHHhcCcCC
Confidence 9999999999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCcceeehhhhhcccccee
Q 027854 185 VFIILSYSLIDYLSQHSAV 203 (218)
Q Consensus 185 ~~~~~~~~~~~y~~~~~a~ 203 (218)
||.+.- ..+.++.+|.
T Consensus 169 gK~v~v---~gw~~~~~A~ 184 (196)
T 3gvf_A 169 GKWVKV---EGWDGIDAAH 184 (196)
T ss_dssp TCCEEE---EEEECHHHHH
T ss_pred CCeEEe---ccCcCHHHHH
Confidence 776543 3445555554
No 5
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A
Probab=100.00 E-value=3.4e-63 Score=424.34 Aligned_cols=167 Identities=34% Similarity=0.610 Sum_probs=150.1
Q ss_pred cCCCcccCcCCCCCCCCCCCceeeccCCCceEEEECCC-CCceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCC
Q 027854 29 SHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKG-GKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 107 (218)
Q Consensus 29 ~~~~~~~spwHdipl~~~~p~~~n~~~~~~~VIEIPrg-s~~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDg 107 (218)
+..|.++|+||+||++++.|++||| ||||||| |++|||+|+++|.|++||++++++.||+|||||||||+|||
T Consensus 15 ~~~g~~im~~~~ip~g~~~p~~vnv------vIEIP~g~s~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~Dg 88 (197)
T 3fq3_A 15 QTQGPGSMNIDAISIGSNPPEDVNV------IIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDG 88 (197)
T ss_dssp -------CCGGGSCSCSSTTSCEEE------EEEECTTCCSEEEEEETTTTEEEEEEECCSSBCCSSEEEECTTCCCTTS
T ss_pred ccCCCCcCCHHHCCCCCCCCCEEEE------EEEecCCCCCEeEEEecCCCCEEEEeecCCCCcCCcccccccCcccCCC
Confidence 3478999999999999999999999 9999985 99999999999999999999999999999999999999999
Q ss_pred CcceEEEecCcccCCcceEEEEEeeeEEeEeCCCCceEEEEEecC--CccccCCCCCCCCChhHHHHHHHHHHHhhccC-
Q 027854 108 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF- 184 (218)
Q Consensus 108 DPLDVlvL~~~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le- 184 (218)
||||||||+++|+.||++++|||||+|+|+|+||+|||||||+++ ||+|++|+|++|||++++++|+|||++||.||
T Consensus 89 DPLDvlvl~~~p~~pG~vi~~r~iGvl~MiDege~D~KIIaVp~~~~dp~~~~i~di~Dlp~~~l~~I~~fF~~YK~le~ 168 (197)
T 3fq3_A 89 DPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYKDLEP 168 (197)
T ss_dssp SCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCSTTTTCCSGGGSCHHHHHHHHHHHHHTTTTST
T ss_pred CceEEEEEcCCCCCCceEEEEEEEEEEEEecCCCCccEEEEEECCCCCchhcccCchHHCCHHHHHHHHHHHHHhcCcCC
Confidence 999999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred CCcceeehhhhhccccceee
Q 027854 185 VFIILSYSLIDYLSQHSAVS 204 (218)
Q Consensus 185 ~~~~~~~~~~~y~~~~~a~~ 204 (218)
+|.+. ...+.++..|..
T Consensus 169 ~K~v~---v~~~~~~~~A~~ 185 (197)
T 3fq3_A 169 GKWVK---IGDWGDEDYARK 185 (197)
T ss_dssp TCCEE---ECCCBCHHHHHH
T ss_pred CCeEE---eCCCCCHHHHHH
Confidence 44432 346666666654
No 6
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A
Probab=100.00 E-value=4.2e-63 Score=424.37 Aligned_cols=168 Identities=35% Similarity=0.546 Sum_probs=145.6
Q ss_pred cCCCcccCcCCCCCCCCCCCceeeccCCCceEEEECCCC-CceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCC
Q 027854 29 SHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGG-KVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDS 107 (218)
Q Consensus 29 ~~~~~~~spwHdipl~~~~p~~~n~~~~~~~VIEIPrgs-~~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDg 107 (218)
+..|.++++||+||++++.|++||| |||||||| ++|||+|+++|.|++||++++++.||+|||||||||++||
T Consensus 15 ~~~g~~~m~~~~i~~g~~~p~~vnv------vIEIP~gs~~~KyE~dk~~G~l~~DR~l~~~~~YP~NYGfIP~Tl~~DG 88 (199)
T 3ld3_A 15 QTQGPGSMNLDDIGSGSNAPEEVNV------VIEVSQDSHPVKYEFDEKNGALWVDRFLPTAMYYPCNYGFIPNTIAGDG 88 (199)
T ss_dssp -----------CCCSCTTTTTSEEE------EEEECTTCCSEEEEECTTTCCEEEEEECSSSBCCSSEEEECTTCCCTTS
T ss_pred ccCCCccCChHHCCCCCCCCCEEEE------EEEecCCCCCEEEEEecCCCCEEEEEEcCCCCcCCcccccccccccCCC
Confidence 3578999999999999999999999 99999998 5999999999999999999999999999999999999999
Q ss_pred CcceEEEecCcccCCcceEEEEEeeeEEeEeCCCCceEEEEEecC--CccccCCCCCCCCChhHHHHHHHHHHHhhccCC
Q 027854 108 DPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSFV 185 (218)
Q Consensus 108 DPLDVlvL~~~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~ 185 (218)
||||||||+++|+.||++++|||||+|+|+|+||+|||||||+++ ||+|++|+|++|||++++++|+|||++||.||+
T Consensus 89 DPLDvlvl~~~p~~pG~vi~vr~IGvl~MiDege~D~KIIaVp~~~~dp~~~~i~di~Dlp~~~l~~I~~fF~~YK~le~ 168 (199)
T 3ld3_A 89 DPVDVLVLARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNYSDLPSSFLDSISHFFSFYKKLEK 168 (199)
T ss_dssp SCCEEEECCSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTST
T ss_pred CceEEEEecCCCCCCceEEEEEEEEEEEEecCCCCcceEEEEECCCCCccccccCchHHCCHHHHHHHHHHHHHhcCcCC
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999999999995
Q ss_pred Ccceeehhhhhccccceee
Q 027854 186 FIILSYSLIDYLSQHSAVS 204 (218)
Q Consensus 186 ~~~~~~~~~~y~~~~~a~~ 204 (218)
++.. ....+.++..|..
T Consensus 169 gK~v--~v~gw~~~~~A~~ 185 (199)
T 3ld3_A 169 DKFV--SVGCWQDAASAKE 185 (199)
T ss_dssp TCCE--EEEEEEEHHHHHH
T ss_pred CceE--EecCCCCHHHHHH
Confidence 4321 2345556555543
No 7
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A*
Probab=100.00 E-value=1.9e-62 Score=413.34 Aligned_cols=158 Identities=34% Similarity=0.567 Sum_probs=151.0
Q ss_pred cCCCCCCCCCCCceeeccCCCceEEEECCCCC-ceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCCCcceEEEe
Q 027854 37 PWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVL 115 (218)
Q Consensus 37 pwHdipl~~~~p~~~n~~~~~~~VIEIPrgs~-~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDgDPLDVlvL 115 (218)
+||+||++++.|..||| ||||||||+ +|||+|+++|.|++||++++++.||+|||||||||+|||||||||||
T Consensus 1 ~~~~ip~~~~~p~~~nv------vIEIP~gs~p~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl 74 (175)
T 2au7_A 1 SLLNVPAGKDLPEDIYV------VIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHTLSLDGDPVDVLVP 74 (175)
T ss_dssp CGGGCCSCSBTTTBEEE------EEEECTTCCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECTTCCCTTSSCCEEEEC
T ss_pred CcccCCCCCCCCCEEEE------EEEecCCCCceeEEEecCCCCEEEeeecCCCCcCCcCcCccCCccCCCCCceEEEEE
Confidence 69999999998999999 999999999 99999999999999999999999999999999999999999999999
Q ss_pred cCcccCCcceEEEEEeeeEEeEeCCCCceEEEEEecC--CccccCCCCCCCCChhHHHHHHHHHHHhhccC-CCcceeeh
Q 027854 116 MQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYS 192 (218)
Q Consensus 116 ~~~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le-~~~~~~~~ 192 (218)
+++|+.||++++||+||+|+|+|+||+|||||||+++ ||+|++++|++|||++++++|+|||++||.|| ||.++.++
T Consensus 75 ~~~p~~pG~vi~~r~iGvl~m~Deg~~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~gK~v~v~g 154 (175)
T 2au7_A 75 TPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEG 154 (175)
T ss_dssp CSSCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCSTTTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEEE
T ss_pred CCCCCCCceEEEEEEEEEEEeecCCCCccEEEEEeCCCCCcchhhCCChHHCCHHHHHHHHHHHHHhhCccCCCCeEEcc
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999 99988775
Q ss_pred hhhhcccccee
Q 027854 193 LIDYLSQHSAV 203 (218)
Q Consensus 193 ~~~y~~~~~a~ 203 (218)
. .++..|.
T Consensus 155 w---~~~~~A~ 162 (175)
T 2au7_A 155 W---ENAEAAK 162 (175)
T ss_dssp E---ECHHHHH
T ss_pred c---cCHHHHH
Confidence 4 4455544
No 8
>3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A*
Probab=100.00 E-value=5.3e-62 Score=409.95 Aligned_cols=158 Identities=36% Similarity=0.580 Sum_probs=150.3
Q ss_pred cCCCCCCCCCCCceeeccCCCceEEEECCCCC-ceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCCCcceEEEe
Q 027854 37 PWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVL 115 (218)
Q Consensus 37 pwHdipl~~~~p~~~n~~~~~~~VIEIPrgs~-~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDgDPLDVlvL 115 (218)
+||+||++++ |+.||| ||||||||+ +|||+|+++|.|++||++++++.||+|||||||||+|||||||||||
T Consensus 3 ~~~~ip~~~~-p~~~nv------vIEIP~gs~p~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl 75 (173)
T 3d53_A 3 FIKKIKAKAN-NNEINV------IIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVV 75 (173)
T ss_dssp CGGGSCSCSS-TTCEEE------EEEECTTCCSEEEEECTTTCCEEEEEECCSSCCCSSEEEECTTCCCTTSSCCEEEEC
T ss_pred chhhCCCCCC-CCeEEE------EEEeCCCCCceeEEEecCCCCEEEeeecCCCCcCCcccchhhCCccCCCCceEEEEE
Confidence 8999999999 999999 999999999 99999999999999999999999999999999999999999999999
Q ss_pred cCcccCCcceEEEEEeeeEEeEeCCCCceEEEEEecC--CccccCCCCCCCCChhHHHHHHHHHHHhhccC-CCcceeeh
Q 027854 116 MQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYS 192 (218)
Q Consensus 116 ~~~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le-~~~~~~~~ 192 (218)
+++|+.||++++||+||+|+|+|+||+|||||||+++ ||+|++++|++|||++++++|+|||++||.|| ||.+.-
T Consensus 76 ~~~p~~~G~vi~~r~iGvl~m~Dege~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~gK~v~v-- 153 (173)
T 3d53_A 76 AHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLEKGKWVKV-- 153 (173)
T ss_dssp CSSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEE--
T ss_pred CCCccCCceEEEEEEEEEEEEccCCCccceEEEEeCCCCCcchhhcCChhHCCHHHHHHHHHHHHHHcCccCCCcEEE--
Confidence 9999999999999999999999999999999999999 99999999999999999999999999999999 777643
Q ss_pred hhhhccccceee
Q 027854 193 LIDYLSQHSAVS 204 (218)
Q Consensus 193 ~~~y~~~~~a~~ 204 (218)
..+.++.+|..
T Consensus 154 -~gw~~~~~A~~ 164 (173)
T 3d53_A 154 -TGWGDKVKAET 164 (173)
T ss_dssp -EEEECHHHHHH
T ss_pred -ccCcCHHHHHH
Confidence 45666666653
No 9
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A
Probab=100.00 E-value=1.6e-61 Score=406.94 Aligned_cols=157 Identities=38% Similarity=0.618 Sum_probs=144.1
Q ss_pred cCCCCCCCCCCCceeeccCCCceEEEECCCCCceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCCCcceEEEec
Q 027854 37 PWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLM 116 (218)
Q Consensus 37 pwHdipl~~~~p~~~n~~~~~~~VIEIPrgs~~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDgDPLDVlvL~ 116 (218)
+||+||++++ |..||| ||||||||++|||+|+++|.|++||++++++.||+|||||||||++||||||||||+
T Consensus 2 ~~~~ip~~~~-p~~~nv------vIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~ 74 (173)
T 2bqx_A 2 NLEKLEVSHD-ADSLCV------VIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLS 74 (173)
T ss_dssp -----CCCEE-TTEEEE------EEEECTTCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECSSCCCTTSSCCEEEECC
T ss_pred CcccCCCCCC-CCeEEE------EEEECCCCCeEEEEecCCCCEEEeeecCCCCcCcccccccccccCCCCCceEEEEEC
Confidence 8999999999 999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCcceEEEEEeeeEEeEeCCCCceEEEEEecC--CccccCCCCCCCCChhHHHHHHHHHHHhhccC-CCcceeehh
Q 027854 117 QEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYSL 193 (218)
Q Consensus 117 ~~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le-~~~~~~~~~ 193 (218)
++|+.+|++++||+||+|+|+|+||+|||||||+++ ||+|++++|++|||++++++|+|||++||.+| ||.+...
T Consensus 75 ~~p~~~G~vi~~r~iGvl~m~D~g~~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~gK~v~~~-- 152 (173)
T 2bqx_A 75 DVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVK-- 152 (173)
T ss_dssp SSCCCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCCTTTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEEE--
T ss_pred CCCCCCceEEEEEEEEEEEeccCCCCccEEEEEeCCCCCcchhhcCChhHCCHHHHHHHHHHHHHhccccCCCceeeC--
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999 7876544
Q ss_pred hhhcccccee
Q 027854 194 IDYLSQHSAV 203 (218)
Q Consensus 194 ~~y~~~~~a~ 203 (218)
.+.++..|.
T Consensus 153 -g~~~~~~A~ 161 (173)
T 2bqx_A 153 -GFENKESAI 161 (173)
T ss_dssp -EEEEHHHHH
T ss_pred -cCcCHHHHH
Confidence 444555554
No 10
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0
Probab=100.00 E-value=1.5e-60 Score=402.69 Aligned_cols=156 Identities=35% Similarity=0.578 Sum_probs=143.7
Q ss_pred CCCCCCCCCCceeeccCCCceEEEECCCCC-ceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCCCcceEEEecC
Q 027854 39 HDLEIGPGAPAVCNCCKSLRQVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQ 117 (218)
Q Consensus 39 Hdipl~~~~p~~~n~~~~~~~VIEIPrgs~-~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDgDPLDVlvL~~ 117 (218)
|+||++++. ++||| ||||||||+ +|||+|+++|.|++||++++++.||+|||||||||+|||||||||||++
T Consensus 6 h~ip~g~~~-~~vnv------vIEIP~gs~~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~ 78 (178)
T 3tr4_A 6 FLVSAGKGI-DDFNV------IIEIPANGGEVKYEYDKELGFLTVDRFMPTSMRYPCNYGFVPSTLAQDGDPLDVLVLTP 78 (178)
T ss_dssp --CCCEEET-TEEEE------EEEECTTCCSEEEEEETTTTEEEEEEECCSSBCCSSEEEECTTCCCTTSSCCEEEECCS
T ss_pred ccCCCCCCC-CEEEE------EEEecCCCCcEEEEEecCCCcEEEEEecCcCccCCccccccCCcccCCCCceEEEEECC
Confidence 999999887 99999 999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cccCCcceEEEEEeeeEEeEeCCCCceEEEEEecC--CccccCCCCCCCCChhHHHHHHHHHHHhhccCC-Ccceeehhh
Q 027854 118 EPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSFV-FIILSYSLI 194 (218)
Q Consensus 118 ~p~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~-~~~~~~~~~ 194 (218)
+|+.||++++|||||+|+|+|+||+|||||||+++ ||+|++|+|++|||++++++|+|||++||.||+ |.+.- .
T Consensus 79 ~p~~pG~vi~~r~iGvl~m~Dege~D~KiIaVp~~~~dp~~~~i~di~dl~~~~l~~i~~fF~~YK~le~gK~v~~---~ 155 (178)
T 3tr4_A 79 VPVQPGVLMRVRALGIMKMEDEAGEDSKVLAVPVVKACRAYEAIQSLKDISSLLLDAISHFFERYKDLEPNKWAKV---K 155 (178)
T ss_dssp SCCCTTCEEEEEEEEEEEEEETTEECCEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEE---E
T ss_pred CCCCCeeEEEEEEEEEEEeccCCCCcceEEEEEcCCCCchhhhcCchhhCCHHHHHHHHHHHHHHcCcCCCceeEe---c
Confidence 99999999999999999999999999999999999 899999999999999999999999999999996 44432 3
Q ss_pred hhccccceee
Q 027854 195 DYLSQHSAVS 204 (218)
Q Consensus 195 ~y~~~~~a~~ 204 (218)
.+.++..|..
T Consensus 156 g~~~~~~A~~ 165 (178)
T 3tr4_A 156 GWEDKEAAKK 165 (178)
T ss_dssp EEECHHHHHH
T ss_pred cCcCHHHHHH
Confidence 4556665543
No 11
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1
Probab=100.00 E-value=1.1e-59 Score=395.89 Aligned_cols=156 Identities=44% Similarity=0.701 Sum_probs=145.0
Q ss_pred CCCCCCCCCceeeccCCCceEEEECCCCCceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCCCcceEEEecCcc
Q 027854 40 DLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEP 119 (218)
Q Consensus 40 dipl~~~~p~~~n~~~~~~~VIEIPrgs~~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDgDPLDVlvL~~~p 119 (218)
+||.+.+.|+.||| ||||||||++|||+|+++|.|++||++++++.||+|||||||||++||||||||||+++|
T Consensus 2 ~i~~g~~~p~~~nv------vIEIP~gs~~KyE~dk~~g~l~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~p 75 (173)
T 1qez_A 2 KLSPGKNAPDVVNV------LVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEEDGDPLDVLVITNYQ 75 (173)
T ss_dssp CCCSCTTTTTSEEE------EEEECTTCCEEEEEETTTTEEEEEEECSSSBCCSSEEEECTTCCCTTSSCCEEEECCSSC
T ss_pred CcCCCCCCCCeEEE------EEEECCCCCeEEEEecCCCCEEEEeecCCCCcCCccccccccccCCCCCceEEEEECCCC
Confidence 45666666788999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceEEEEEeeeEEeEeCCCCceEEEEEecC--CccccCCCCCCCCChhHHHHHHHHHHHhhccC-CCcceeehhhhh
Q 027854 120 VLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYSLIDY 196 (218)
Q Consensus 120 ~~~G~vv~vrviG~L~miD~gE~D~KIIaV~~~--Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le-~~~~~~~~~~~y 196 (218)
+.||++++||+||+|+|+|+||+|||||||+++ ||+|++|+|++|||++++++|+|||++||.|| ||.+.- ..+
T Consensus 76 ~~~G~vi~~r~iGvl~m~Dege~D~KiiaV~~~k~dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le~gK~v~~---~gw 152 (173)
T 1qez_A 76 LYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDINDLPQATKNKIVHFFEHYKELEPGKYVKI---SGW 152 (173)
T ss_dssp CCTTCEEEEEEEEEEEEEETTEEEEEEEEEECTTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEEE---EEE
T ss_pred CCCccEEEEEEEEEEEeecCCCcccEEEEEeCCCCCcchhhcCChHHCCHHHHHHHHHHHHHhccccCCCceEE---ccc
Confidence 999999999999999999999999999999999 99999999999999999999999999999999 787654 445
Q ss_pred ccccceee
Q 027854 197 LSQHSAVS 204 (218)
Q Consensus 197 ~~~~~a~~ 204 (218)
.++..|..
T Consensus 153 ~~~~~A~~ 160 (173)
T 1qez_A 153 GSATEAKN 160 (173)
T ss_dssp ECHHHHHH
T ss_pred cCHHHHHH
Confidence 66666653
No 12
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A
Probab=100.00 E-value=1.1e-58 Score=389.51 Aligned_cols=147 Identities=35% Similarity=0.704 Sum_probs=136.1
Q ss_pred ceeeccCCCceEEEECCCCCceEEEecCCCCeEEeEecccCCCCcCcccccccccCCCCCcceEEEecCcccCCcceEEE
Q 027854 49 AVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRC 128 (218)
Q Consensus 49 ~~~n~~~~~~~VIEIPrgs~~KyEidk~~g~i~~DR~l~~~~~yP~NYGfIPqT~~gDgDPLDVlvL~~~p~~~G~vv~v 128 (218)
-.||| ||||||||++|||+|+++|.+++||++++++.||+|||||||||++||||||||||+++|++||++++|
T Consensus 11 ~~~nv------vIEIP~gs~~KyE~Dk~~G~l~~DR~l~~~~~YP~NYGfIP~Tl~~DGDPlDvlvl~~~p~~pG~vi~~ 84 (172)
T 1sxv_A 11 MQFDV------TIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLLPQPVFPGVLVAA 84 (172)
T ss_dssp CCEEE------EEEECTTCCEEC-CCTTTCCCCCCEECSSSCCCSSEEEEETTCCCTTSSCCEEEECCSSCCCTTCEEEE
T ss_pred eEEEE------EEEECCCCCeEEEEEcCCCCEEEEeecCCCCCCCcCcCccCCccCCCCCCeEEEEEcCCCcCCceEEEE
Confidence 35788 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeeEEeEeCCCCceEEEEEecCCccccCCCCCCCCChhHHHHHHHHHHHhhccC-CCcceeehhhhhccccceee
Q 027854 129 RAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIKELPPHRLAEIRRFFEDCIHSF-VFIILSYSLIDYLSQHSAVS 204 (218)
Q Consensus 129 rviG~L~miD~gE~D~KIIaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~le-~~~~~~~~~~~y~~~~~a~~ 204 (218)
||||+|+|+|+||+|||||||+++||+|++++|++|||++++++|+|||++||.|| ||.+. ...+.++.+|..
T Consensus 85 r~iGvl~m~Dege~D~KIIaVp~~Dp~~~~i~di~Dlp~~~l~~I~~fF~~YK~le~gK~v~---v~gw~~~~~A~~ 158 (172)
T 1sxv_A 85 RPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHFFVHYKDLEPGKFVK---AADWVDRAEAEA 158 (172)
T ss_dssp EEEEEEEEEETTEECCEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTTTSTTCCEE---EEEEECHHHHHH
T ss_pred EEEEEEEecCCCCCCCEEEEEeCCCCCccccCChHHCCHHHHHHHHHHHHHhcCcCCCCeEE---eCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 77653 334556655543
No 13
>1jo6_A KCNMB2, potassium large conductance calcium-activated channel, subfamily M, beta member 2..., large; helix, ION channel, cytoplasmic PART of; NMR {Synthetic} SCOP: j.89.1.1
Probab=32.73 E-value=4.8 Score=26.71 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=16.2
Q ss_pred CcCcccccccccC-----------CCCCcceE
Q 027854 92 YPHNYGFIPRTIC-----------EDSDPMDV 112 (218)
Q Consensus 92 yP~NYGfIPqT~~-----------gDgDPLDV 112 (218)
++|.++=+++|+. +||||+|+
T Consensus 2 ~~~~~~k~~~~~~~~~~R~iy~~~~dgd~~dk 33 (45)
T 1jo6_A 2 FIWTSGRTSSSYRHDEKRNIYQKIRDHDLLDK 33 (45)
T ss_dssp CCSSCCCCCCSSSSCSTTSSHHHHHHHHTTTS
T ss_pred cccccccceeeeccccccccccccccCCcccc
Confidence 5677887888773 58999996
No 14
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=31.55 E-value=59 Score=26.28 Aligned_cols=46 Identities=13% Similarity=0.183 Sum_probs=33.7
Q ss_pred eEEEecCcccCCcceEEEEEeeeEEeEeCCCCceE---EEEEecCCccccCCCCCCCCCh
Q 027854 111 DVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDK---IIAVCADDPEFRHYKDIKELPP 167 (218)
Q Consensus 111 DVlvL~~~p~~~G~vv~vrviG~L~miD~gE~D~K---IIaV~~~Dp~~~~i~di~Dl~~ 167 (218)
+.+|++++|+.+|+.+.+|+.- -+..|. =|+|-..||. .++. ++|+
T Consensus 36 ~givFS~RPl~~~E~~~v~I~~-------~~~~wsG~l~~GvT~~dP~--~l~~--~lP~ 84 (168)
T 2yue_A 36 RAITFSARPVRINERICVKFAE-------ISNNWNGGIRFGFTSNDPV--TLEG--TLPK 84 (168)
T ss_dssp CCEEEESSCCCSSCCEEEEEEE-------CCSSSSSCCEEEEESSCGG--GTTT--CCCS
T ss_pred ceEEEECCCCcCCCEEEEEEEe-------ecCCcceeEEEeeeecCHH--HcCC--CCCC
Confidence 6789999999999999999843 234454 6788888995 3432 5664
No 15
>3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A*
Probab=24.52 E-value=48 Score=24.42 Aligned_cols=21 Identities=19% Similarity=0.252 Sum_probs=15.9
Q ss_pred cCCCCcCcccccccccCCCCCcceEEE
Q 027854 88 SSVVYPHNYGFIPRTICEDSDPMDVLV 114 (218)
Q Consensus 88 ~~~~yP~NYGfIPqT~~gDgDPLDVlv 114 (218)
.+..+|..|+. .|||-+||++
T Consensus 61 dp~~tp~Dlem------eD~D~IDvmL 81 (82)
T 3goe_A 61 DPNDQVQSTEL------EDEDQVSVVL 81 (82)
T ss_dssp CTTSBGGGSSC------CTTCEEEEEC
T ss_pred CccCChhhhCC------cCCceeeeee
Confidence 45567777775 6999999974
No 16
>2l76_A Nfatc2-interacting protein; ubiquitin-like domain, structural genomics, PSI-biology, Pro structure initiative; NMR {Homo sapiens}
Probab=24.34 E-value=55 Score=24.59 Aligned_cols=61 Identities=21% Similarity=0.260 Sum_probs=37.9
Q ss_pred CceeeccCCCceEEEECCCCCceEEEecCCCCeEE------------e--EecccCCCCcCcccccccccC-CCCCcceE
Q 027854 48 PAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKV------------D--RVLYSSVVYPHNYGFIPRTIC-EDSDPMDV 112 (218)
Q Consensus 48 p~~~n~~~~~~~VIEIPrgs~~KyEidk~~g~i~~------------D--R~l~~~~~yP~NYGfIPqT~~-gDgDPLDV 112 (218)
...+|. -|- -+|+...+.+-+.+.+=++ + |+++- .-..+=---|++++ +|||-+|+
T Consensus 19 ~~~Ini------KV~-~~g~ev~FkIK~tt~l~KL~~aYc~r~gv~~~sirFlfD--G~rI~~~~TP~~L~meD~DiID~ 89 (95)
T 2l76_A 19 PRLFPL------KIR-CRADLVRLPLRMSEPLQSVVDHMATHLGVSPSRILLLFG--ETELSPTATPRTLKLGVADIIDC 89 (95)
T ss_dssp CCCEEE------EEE-CSSSEEEEEECSSSCTHHHHHHHHHHHTSCGGGEEEEET--TEECCTTSCHHHHTCCSSCEEEE
T ss_pred CCeEEE------EEE-cCCcEEEEEEecCChHHHHHHHHHhhcCCChhhEEEEEC--CcCCCCCCCHhHcCCCCCCEEEE
Confidence 344666 666 4788888888887764111 1 22222 22334444556665 89999999
Q ss_pred EEecC
Q 027854 113 LVLMQ 117 (218)
Q Consensus 113 lvL~~ 117 (218)
+++.+
T Consensus 90 ~~~~~ 94 (95)
T 2l76_A 90 VVLTS 94 (95)
T ss_dssp EECCC
T ss_pred EEecC
Confidence 99875
No 17
>2cqg_A TDP-43, TAR DNA-binding protein-43; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.32 E-value=8.5 Score=26.99 Aligned_cols=44 Identities=7% Similarity=0.260 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhhccCCCc---------ceeehhhhhccccceeeccccccee
Q 027854 169 RLAEIRRFFEDCIHSFVFI---------ILSYSLIDYLSQHSAVSTTPNMHKL 212 (218)
Q Consensus 169 ~l~~i~~fF~~YK~le~~~---------~~~~~~~~y~~~~~a~~~~~~~~~~ 212 (218)
.-+.|+++|..|-...... --.|++.+|.+..+|....-++|.+
T Consensus 28 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~ 80 (103)
T 2cqg_A 28 TEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMI 80 (103)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHSCEEE
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCccceEEEEECCHHHHHHHHHcCCee
Confidence 3578999999996554322 2358999998888776655566654
No 18
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=23.04 E-value=53 Score=26.45 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=15.3
Q ss_pred cccccccccCCCCCcceEEEecCcccCCcceEEEEEeeeEEeEe
Q 027854 95 NYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMID 138 (218)
Q Consensus 95 NYGfIPqT~~gDgDPLDVlvL~~~p~~~G~vv~vrviG~L~miD 138 (218)
.-|.+|..|+...|+++ |....||-||.+.+..
T Consensus 11 ~~~~~~~~~~~~~~~~~-----------~~~f~vkYLGs~eV~~ 43 (175)
T 2ela_A 11 SSGLVPRGSHMTEDSIL-----------HQLFIVRFLGSMEVKS 43 (175)
T ss_dssp --------------CCC-----------CEEEEEEEEEEEEECS
T ss_pred cCCccCCCCCCCccccc-----------cceEEEEcceEEEecC
Confidence 45899999998887774 4688999999999853
No 19
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.04 E-value=25 Score=24.34 Aligned_cols=38 Identities=5% Similarity=0.197 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhhccCCCcce---------eehhhhhccccceeecc
Q 027854 169 RLAEIRRFFEDCIHSFVFIIL---------SYSLIDYLSQHSAVSTT 206 (218)
Q Consensus 169 ~l~~i~~fF~~YK~le~~~~~---------~~~~~~y~~~~~a~~~~ 206 (218)
.-++|+++|..|-..+...+. .|++.+|.+..+|....
T Consensus 25 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~ 71 (102)
T 1x5s_A 25 NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAM 71 (102)
T ss_dssp CHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHH
Confidence 357899999999666543332 38888998877765443
Done!