RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= 027854
(218 letters)
>3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A
{Thermococcus thioreducens} PDB: 3r6e_A* 3q3l_A 3i98_A
3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A
Length = 178
Score = 241 bits (617), Expect = 5e-82
Identities = 69/144 (47%), Positives = 96/144 (66%), Gaps = 6/144 (4%)
Query: 36 HPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHN 95
+P+H+LE GP P V ++EI KG + KYELDKA+GL+K+DRVLYS YP +
Sbjct: 2 NPFHELEPGPEVPEVVYA------LIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVD 55
Query: 96 YGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPE 155
YG IP+T +D DP D++V+M+EPV P + + R IG+M M D G+KD K++AV +DP
Sbjct: 56 YGIIPQTWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPY 115
Query: 156 FRHYKDIKELPPHRLAEIRRFFED 179
F +KDI ++P L EI FF+
Sbjct: 116 FNDWKDISDVPKAFLDEIAHFFQR 139
>2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP:
b.40.5.1
Length = 174
Score = 236 bits (605), Expect = 2e-80
Identities = 59/141 (41%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 39 HDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGF 98
L +G AP V + V+E+ +G KYE D G IK+DRVL + YP +YGF
Sbjct: 4 KSLPVGDKAPEVVHM------VIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGF 57
Query: 99 IPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRH 158
IP T+ ED DP+D LVL P+LPG + R +GL+ M D+ D K+I V A+D H
Sbjct: 58 IPSTLAEDGDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDH 117
Query: 159 YKDIKELPPHRLAEIRRFFED 179
+DI ++P EI+ FFE
Sbjct: 118 IQDIGDVPEGVKQEIQHFFET 138
>1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase);
thermostability, magnesium, hydrolase; 2.70A {Sulfolobus
acidocaldarius} SCOP: b.40.5.1
Length = 173
Score = 230 bits (590), Expect = 5e-78
Identities = 67/142 (47%), Positives = 86/142 (60%), Gaps = 8/142 (5%)
Query: 40 DLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFI 99
L G AP V N +VEI +G +KYE D G+IKVDRVLY+S+ YP NYGFI
Sbjct: 2 KLSPGKNAPDVVNV------LVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFI 55
Query: 100 PRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFR 157
P T+ ED DP+DVLV+ + PGS + R IG++ M D+ +D KI+AV D DP F
Sbjct: 56 PGTLEEDGDPLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFS 115
Query: 158 HYKDIKELPPHRLAEIRRFFED 179
+ KDI +LP +I FFE
Sbjct: 116 NIKDINDLPQATKNKIVHFFEH 137
>3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S
structural genomics center for infectious disease,
ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei
1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A*
Length = 196
Score = 231 bits (590), Expect = 8e-78
Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 26 SSMSHRSVAAHPWHDLEIGPGAPAVCNCCKSLRQVVEIGKGGK-VKYELDKASGLIKVDR 84
+ + + ++ G P N ++EI + VKYE DKA GL+ VDR
Sbjct: 12 LEAQTQGPGSMSFSNVPAGKDLPQDFNV------IIEIPAQSEPVKYEADKALGLLVVDR 65
Query: 85 VLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDD 144
+ + + YP NYGFIP+T+ D DP+DVLV+ P+L GS +R RA+G++ M D+ D
Sbjct: 66 FIGTGMRYPVNYGFIPQTLSGDGDPVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDA 125
Query: 145 KIIAVCADD--PEFRHYKDIKELPPHRLAEIRRFFED 179
K++AV D P + K I ++P + +I+ FFE
Sbjct: 126 KLVAVPHDKVCPMTANLKSIDDVPAYLKDQIKHFFEQ 162
>3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A
Length = 199
Score = 231 bits (590), Expect = 1e-77
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 11/165 (6%)
Query: 20 LNERILSSMSHRSVAAHP--WHDLEIGPGAPAVCNCCKSLRQVVEIGKGGK-VKYELDKA 76
+ + ++ ++ D+ G AP N V+E+ + VKYE D+
Sbjct: 4 HHHHHMGTLEAQTQGPGSMNLDDIGSGSNAPEEVNV------VIEVSQDSHPVKYEFDEK 57
Query: 77 SGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPM 136
+G + VDR L +++ YP NYGFIP TI D DP+DVLVL + PV+PG+ + R +G++ M
Sbjct: 58 NGALWVDRFLPTAMYYPCNYGFIPNTIAGDGDPVDVLVLARFPVMPGAVICVRPVGVLMM 117
Query: 137 IDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFED 179
D+ +D K++AV A D + + + +LP L I FF
Sbjct: 118 NDEKGEDAKVLAVPATKVDQYYGNIVNYSDLPSSFLDSISHFFSF 162
>1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase;
1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A
4ecp_A
Length = 172
Score = 229 bits (587), Expect = 1e-77
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 41 LEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGFIP 100
+ +EI KG + KYE+D +G +++DR LY+ + YP +YGFI
Sbjct: 3 SSHHHHHHMQFDV------TIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIE 56
Query: 101 RTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYK 160
T+ +D DP+D LVL+ +PV PG + R +G+ M+D+ DDK++ V A DP + H +
Sbjct: 57 DTLGDDGDPLDALVLLPQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQ 116
Query: 161 DIKELPPHRLAEIRRFFED 179
DI ++P L I+ FF
Sbjct: 117 DIGDVPAFELDAIKHFFVH 135
>2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori}
PDB: 1ygz_A 2bqy_A
Length = 173
Score = 225 bits (576), Expect = 6e-76
Identities = 59/143 (41%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 39 HDLEIGPGAPAVCNCCKSLRQVVEIGKGGKVKYELDKASGLIKVDRVLYSSVVYPHNYGF 98
LE+ A ++ V+EI K +KYELDK SG + VDRVLY + YP NYGF
Sbjct: 4 EKLEVSHDADSL-CV------VIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGF 56
Query: 99 IPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEF 156
+P T+ D DP+D LVL GS ++ R +G++ M D+ D+K+IA+ D DP
Sbjct: 57 VPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTH 116
Query: 157 RHYKDIKELPPHRLAEIRRFFED 179
+ KDI +L H L +I+ FFE
Sbjct: 117 SYVKDIDDLSKHTLDKIKHFFET 139
>2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia
coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A
2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A
1mjz_A 1mjx_A 1mjw_A 3i4q_A*
Length = 175
Score = 222 bits (568), Expect = 1e-74
Identities = 53/144 (36%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 39 HDLEIGPGAPAVCNCCKSLRQVVEIGKGGK-VKYELDKASGLIKVDRVLYSSVVYPHNYG 97
++ G P V+EI +KYE+DK SG + VD+ + +++ YP NYG
Sbjct: 3 LNVPAGKDLPEDIYV------VIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYG 56
Query: 98 FIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPE 155
+I T+ D DP+DVLV P+ PGS RCR +G++ M D+ +D K++AV E
Sbjct: 57 YINHTLSLDGDPVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKE 116
Query: 156 FRHYKDIKELPPHRLAEIRRFFED 179
+ H KD+ +LP A+I FFE
Sbjct: 117 YDHIKDVNDLPELLKAQIAHFFEH 140
>3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase;
ssgcid, inorganic phosphatase; 1.90A {Brucella
melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A
Length = 197
Score = 221 bits (566), Expect = 4e-74
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 11/166 (6%)
Query: 19 ALNERILSSMSHRSVAAHP--WHDLEIGPGAPAVCNCCKSLRQVVEIGKGGK-VKYELDK 75
+ + ++ ++ + IG P N ++E+ GG+ +KYE+DK
Sbjct: 3 HHHHHHMGTLEAQTQGPGSMNIDAISIGSNPPEDVNV------IIEVPVGGQPIKYEMDK 56
Query: 76 ASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMP 135
+G + VDR LY+ + YP NYGF+P T+ ED DP+DVLV P++PG + R IG++
Sbjct: 57 KAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLV 116
Query: 136 MIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRFFED 179
M D KD+KIIAV + + D ++P L +I FFE
Sbjct: 117 MEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEH 162
>3tr4_A Inorganic pyrophosphatase; central intermediary metabolism,
hydrolase; HET: MSE; 2.00A {Coxiella burnetii}
Length = 178
Score = 208 bits (531), Expect = 5e-69
Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 35 AHPWHDLEIGPGAPAVCNCCKSLRQVVEI-GKGGKVKYELDKASGLIKVDRVLYSSVVYP 93
++ L N ++EI GG+VKYE DK G + VDR + +S+ YP
Sbjct: 1 SYVMTFLVSAGKGIDDFNV------IIEIPANGGEVKYEYDKELGFLTVDRFMPTSMRYP 54
Query: 94 HNYGFIPRTICEDSDPMDVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADD 153
NYGF+P T+ +D DP+DVLVL PV PG +R RA+G+M M D+ +D K++AV
Sbjct: 55 CNYGFVPSTLAQDGDPLDVLVLTPVPVQPGVLMRVRALGIMKMEDEAGEDSKVLAVPVVK 114
Query: 154 P--EFRHYKDIKELPPHRLAEIRRFFED 179
+ + +K++ L I FFE
Sbjct: 115 ACRAYEAIQSLKDISSLLLDAISHFFER 142
>3d53_A Inorganic pyrophosphatase; seattle structural G center for
infectious disease, ssgcid, hydrolase, magnesium
binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A*
Length = 173
Score = 207 bits (530), Expect = 6e-69
Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 60 VVEIGKGG-KVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVLVLMQE 118
++EI +KYE DK SG + VDR + +++ YP NYGFIP T+ D DP+DVLV+
Sbjct: 19 IIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHH 78
Query: 119 PVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCAD--DPEFRHYKDIKELPPHRLAEIRRF 176
PV+PGS ++CRAIG++ M D+ D+KIIAV D F H K++ +L I F
Sbjct: 79 PVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHF 138
Query: 177 FED 179
FE
Sbjct: 139 FEH 141
>1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase,
hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces
cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A
2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A*
2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A
Length = 286
Score = 182 bits (464), Expect = 1e-57
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 35/192 (18%)
Query: 15 GPPVALNERILSSMSHRSVAAHPWHDLEIGPGAPA-VCNCCKSLRQVVEIGKGGKVKYEL 73
G L ++ + V +HD+ + + N VVEI + K E+
Sbjct: 8 GAKNTLEYKVYIEKDGKPV--SAFHDIPLYADKENNIFNM------VVEIPRWTNAKLEI 59
Query: 74 DK-----------ASGLIKVDRVLYSSVVYPHNYGFIPRT------------ICEDSDPM 110
K G ++ R + Y HNYG P+T D+DP+
Sbjct: 60 TKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVSHPETKAVGDNDPI 119
Query: 111 DVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIK---ELPP 167
DVL + + G + +A+G+M ++D+GE D K+IA+ +DP DI+ + P
Sbjct: 120 DVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDINDPLAPKLNDIEDVEKYFP 179
Query: 168 HRLAEIRRFFED 179
L +F
Sbjct: 180 GLLRATNEWFRI 191
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.5 bits (86), Expect = 0.002
Identities = 36/265 (13%), Positives = 75/265 (28%), Gaps = 91/265 (34%)
Query: 7 TAGSNNSGGPPVALNE------RILSSMSHRS---VAAHPWHDLEIGPGAPAVCNCCKSL 57
T+ S++S + ++ R+L S + + V + + + A CK L
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ-NAKA---WNAFNLSCKIL 269
Query: 58 -----RQVVEIGKGGKVKYEL--DKASGLIKVD-RVLYSSVVYPHNYGFIPRTICEDSDP 109
+QV + + + L + + L + +PR + + P
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-DCRPQDLPREVLTTN-P 327
Query: 110 MDVLVLMQEPVLPGSFLRCRAIGLMPMID-----QGEKDDKIIAVCADDPEFRHYKDIKE 164
+ ++ +R D +K II +
Sbjct: 328 RRLSII-------AESIRDGLA----TWDNWKHVNCDKLTTIIESS-----------LNV 365
Query: 165 LPPHRLAEIRRFFEDC--------IHSFVFIIL-----------------SYSLID---- 195
L P AE R+ F+ I + + ++ YSL++
Sbjct: 366 LEP---AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK 422
Query: 196 ---------YLSQHSAVSTTPNMHK 211
YL + +H+
Sbjct: 423 ESTISIPSIYLELKVKLENEYALHR 447
Score = 33.3 bits (75), Expect = 0.060
Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 66/203 (32%)
Query: 22 ERILSSMSHRSVAAHPW-------HDLEIGPGAPAVCNCCKSL-RQVVEIGKGGKVKYEL 73
+++ + S+ + + +L R +V+ Y +
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK--LENEYALHRSIVD-------HYNI 455
Query: 74 DKAS-----GLIKVDRVLYSSVVYPH------------------NYGFIPRTICEDSDPM 110
K +D+ YS + + H ++ F+ + I DS
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGH-HLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTA- 513
Query: 111 DVLVLMQEPVLPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEF-RHYKDIKE-LPPH 168
+ ++ + Q + I C +DP++ R I + LP
Sbjct: 514 ----------------WNASGSILNTLQQLKFYKPYI--CDNDPKYERLVNAILDFLPKI 555
Query: 169 RLAEIRRFFEDCIHSFVFIILSY 191
I + D + I L
Sbjct: 556 EENLICSKYTDLLR----IALMA 574
Score = 29.8 bits (66), Expect = 0.79
Identities = 20/156 (12%), Positives = 47/156 (30%), Gaps = 36/156 (23%)
Query: 68 KVKYELDKASGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPMDVL--VLMQ-EP----V 120
+K E + ++ + +Y N F + P L L++ P +
Sbjct: 97 PIKTE-QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSR-LQPYLKLRQALLELRPAKNVL 154
Query: 121 LPG------SFL---RCRAIGLMPMIDQG---------EKDDKIIA----VCAD-DPEFR 157
+ G +++ C + + +D + ++ + DP +
Sbjct: 155 IDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 158 HYKDIKELPPHRLAEI----RRFFEDCIHSFVFIIL 189
D R+ I RR + + ++L
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 31.2 bits (70), Expect = 0.33
Identities = 17/129 (13%), Positives = 31/129 (24%), Gaps = 54/129 (41%)
Query: 108 DPMDVLVLMQEPV----LPGSFLRCRAIGLMPMIDQGEKDDKIIAVCADDPEFRHYKDIK 163
+P + EP L G FL G ++ + + + +
Sbjct: 43 EPTEGFAADDEPTTPAELVGKFL-----GY-------------VSSLVEPSKVGQFDQV- 83
Query: 164 ELPPHRLAEIRRFFEDC------IHSFVF---------------IILSYSLIDYLSQHSA 202
L FE+C IH+ +I +Y ++ A
Sbjct: 84 ------LNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNY----ITARIMA 133
Query: 203 VSTTPNMHK 211
Sbjct: 134 KRPFDKKSN 142
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding
domain, PDI-like protein, structural genomics; NMR
{Arabidopsis thaliana} SCOP: g.49.1.3
Length = 89
Score = 27.2 bits (60), Expect = 1.4
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 36 HPWHDLEIGPGAPAVCNCCK 55
H H+LE+ C+ C+
Sbjct: 35 HEEHELELTRVQVYTCDKCE 54
>2qr4_A Peptidase M3B, oligoendopeptidase F; structural genomics, PSI-2,
protein ST initiative; 2.50A {Enterococcus faecium}
Length = 587
Score = 26.6 bits (59), Expect = 7.4
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 143 DDKIIAVCADDPEFRHYK----DIKELPPHRLAE 172
DD+I ++P+ Y+ I + H L+
Sbjct: 100 DDQIWQYFKEEPKLEVYRHYIQQIVDNRAHVLSA 133
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.139 0.432
Gapped
Lambda K H
0.267 0.0733 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,494,808
Number of extensions: 210160
Number of successful extensions: 488
Number of sequences better than 10.0: 1
Number of HSP's gapped: 469
Number of HSP's successfully gapped: 21
Length of query: 218
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 128
Effective length of database: 4,188,903
Effective search space: 536179584
Effective search space used: 536179584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.0 bits)