Your job contains 1 sequence.
>027855
MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR
PKMKVCMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASESVIKQI
PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF
QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027855
(217 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176337 - symbol:AT5G22440 species:3702 "Arabi... 937 3.8e-94 1
TAIR|locus:2201811 - symbol:AT1G08360 species:3702 "Arabi... 907 5.7e-91 1
TAIR|locus:2042087 - symbol:PGY1 "PIGGYBACK1" species:370... 899 4.0e-90 1
FB|FBgn0036213 - symbol:RpL10Ab "Ribosomal protein L10Ab"... 690 5.6e-68 1
CGD|CAL0005037 - symbol:RPL10A species:5476 "Candida albi... 663 4.1e-65 1
ZFIN|ZDB-GENE-030131-2025 - symbol:rpl10a "ribosomal prot... 662 5.2e-65 1
UNIPROTKB|Q5E9E6 - symbol:RPL10A "60S ribosomal protein L... 650 9.7e-64 1
UNIPROTKB|E2R9V0 - symbol:RPL10A "Ribosomal protein" spec... 650 9.7e-64 1
UNIPROTKB|P62906 - symbol:RPL10A "60S ribosomal protein L... 650 9.7e-64 1
RGD|620497 - symbol:Rpl10a "ribosomal protein L10A" speci... 650 9.7e-64 1
WB|WBGene00004412 - symbol:rpl-1 species:6239 "Caenorhabd... 647 2.0e-63 1
MGI|MGI:1343877 - symbol:Rpl10a "ribosomal protein L10A" ... 645 3.3e-63 1
GENEDB_PFALCIPARUM|PF14_0391 - symbol:PF14_0391 "ribosoma... 644 4.2e-63 1
UNIPROTKB|Q8IL58 - symbol:PF14_0391 "60S ribosomal protei... 644 4.2e-63 1
SGD|S000006141 - symbol:RPL1A "Ribosomal 60S subunit prot... 644 4.2e-63 1
SGD|S000003103 - symbol:RPL1B "Ribosomal 60S subunit prot... 644 4.2e-63 1
RGD|1559639 - symbol:RGD1559639 "similar to ribosomal pro... 639 1.4e-62 1
RGD|1566137 - symbol:RGD1566137 "similar to ribosomal pro... 638 1.8e-62 1
DICTYBASE|DDB_G0276871 - symbol:rpl10a "S60 ribosomal pro... 632 7.9e-62 1
UNIPROTKB|G3X7N2 - symbol:G3X7N2 "Ribosomal protein" spec... 631 1.0e-61 1
ASPGD|ASPL0000057044 - symbol:AN1122 species:162425 "Emer... 630 1.3e-61 1
UNIPROTKB|G4MTC2 - symbol:MGG_04696 "Ribosomal protein" s... 630 1.3e-61 1
POMBASE|SPCC1183.08c - symbol:rpl101 "60S ribosomal prote... 630 1.3e-61 1
UNIPROTKB|E1BKD0 - symbol:E1BKD0 "Ribosomal protein" spec... 628 2.1e-61 1
RGD|1588266 - symbol:LOC680700 "similar to ribosomal prot... 627 2.7e-61 1
POMBASE|SPBC30D10.18c - symbol:rpl102 "60S ribosomal prot... 624 5.5e-61 1
UNIPROTKB|Q6EE62 - symbol:RPL10A "Ribosomal protein" spec... 562 2.1e-54 1
RGD|1562962 - symbol:RGD1562962 "similar to ribosomal pro... 548 6.3e-53 1
UNIPROTKB|J9P122 - symbol:J9P122 "Ribosomal protein" spec... 534 1.9e-51 1
UNIPROTKB|F1M8D2 - symbol:F1M8D2 "Ribosomal protein" spec... 486 2.3e-46 1
UNIPROTKB|F1RS60 - symbol:F1RS60 "Uncharacterized protein... 484 3.8e-46 1
FB|FBgn0038281 - symbol:RpL10Aa "Ribosomal protein L10Aa"... 482 6.2e-46 1
UNIPROTKB|F1RYZ5 - symbol:RPL10A "Ribosomal protein" spec... 472 7.1e-45 1
UNIPROTKB|P53027 - symbol:RPL10A "60S ribosomal protein L... 450 1.5e-42 1
UNIPROTKB|F1SCR8 - symbol:F1SCR8 "Uncharacterized protein... 429 2.6e-40 1
UNIPROTKB|I3LES0 - symbol:I3LES0 "Uncharacterized protein... 389 4.4e-36 1
UNIPROTKB|J9P1H7 - symbol:J9P1H7 "Uncharacterized protein... 374 1.7e-34 1
UNIPROTKB|F1Q2K0 - symbol:LOC486972 "Uncharacterized prot... 365 1.5e-33 1
UNIPROTKB|F1RX79 - symbol:F1RX79 "Uncharacterized protein... 329 1.0e-29 1
TIGR_CMR|BA_0098 - symbol:BA_0098 "ribosomal protein L1" ... 136 5.8e-08 1
TAIR|locus:2041554 - symbol:AT2G42650 species:3702 "Arabi... 127 9.1e-08 2
UNIPROTKB|Q06797 - symbol:rplA "50S ribosomal protein L1"... 133 1.7e-07 1
TIGR_CMR|CHY_2322 - symbol:CHY_2322 "ribosomal protein L1... 131 3.4e-07 1
TIGR_CMR|CBU_0227 - symbol:CBU_0227 "ribosomal protein L1... 131 3.5e-07 1
TAIR|locus:2098979 - symbol:AT3G58660 species:3702 "Arabi... 122 1.8e-06 2
TIGR_CMR|CJE_0525 - symbol:CJE_0525 "ribosomal protein L1... 124 3.2e-06 1
TIGR_CMR|GSU_2866 - symbol:GSU_2866 "ribosomal protein L1... 121 8.0e-06 1
TIGR_CMR|SPO_3513 - symbol:SPO_3513 "ribosomal protein L1... 117 2.6e-05 1
TIGR_CMR|ECH_0955 - symbol:ECH_0955 "ribosomal protein L1... 111 0.00013 1
TAIR|locus:2087388 - symbol:EMB3126 "EMBRYO DEFECTIVE 312... 113 0.00021 1
TIGR_CMR|DET_0992 - symbol:DET_0992 "ribosomal protein L1... 110 0.00021 1
TAIR|locus:2202260 - symbol:AT1G06380 species:3702 "Arabi... 109 0.00034 1
TIGR_CMR|APH_1027 - symbol:APH_1027 "ribosomal protein L1... 107 0.00038 1
TIGR_CMR|CPS_4772 - symbol:CPS_4772 "ribosomal protein L1... 106 0.00064 1
>TAIR|locus:2176337 [details] [associations]
symbol:AT5G22440 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AB007651 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 ProtClustDB:CLSN2687446 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 EMBL:AY037253 EMBL:AY077657
EMBL:F19997 IPI:IPI00536065 RefSeq:NP_001078612.1
RefSeq:NP_197636.1 UniGene:At.7367 ProteinModelPortal:P59231
SMR:P59231 STRING:P59231 PRIDE:P59231 EnsemblPlants:AT5G22440.1
EnsemblPlants:AT5G22440.2 GeneID:832305 KEGG:ath:AT5G22440
GeneFarm:211 TAIR:At5g22440 InParanoid:P59231 OMA:GPRNKMP
PhylomeDB:P59231 Genevestigator:P59231 GermOnline:AT5G22440
Uniprot:P59231
Length = 217
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 183/217 (84%), Positives = 194/217 (89%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSKLQS+A+REA+SSI+ + KETK RNFTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1 MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
PKMK+CMLGDAQHVEEAEKIGL+ MDVE +HAFLASESVIKQI
Sbjct: 61 PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGPGLNKAGKFPTLV+HQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP NR+F
Sbjct: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217
>TAIR|locus:2201811 [details] [associations]
symbol:AT1G08360 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 EMBL:AC006932
SUPFAM:SSF56808 KO:K02865 GO:GO:0022625 EMBL:AY065077 EMBL:AY114542
IPI:IPI00519555 PIR:C86217 RefSeq:NP_563813.2 UniGene:At.24240
ProteinModelPortal:Q8VZB9 SMR:Q8VZB9 STRING:Q8VZB9 PaxDb:Q8VZB9
PRIDE:Q8VZB9 EnsemblPlants:AT1G08360.1 GeneID:837356
KEGG:ath:AT1G08360 GeneFarm:156 TAIR:At1g08360 eggNOG:COG0081
HOGENOM:HOG000207014 InParanoid:Q8VZB9 OMA:VAVGHMK PhylomeDB:Q8VZB9
ProtClustDB:CLSN2687446 Genevestigator:Q8VZB9 GermOnline:AT1G08360
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
Uniprot:Q8VZB9
Length = 216
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 181/217 (83%), Positives = 190/217 (87%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSKLQS+A+REA+++I S E KKRNF ETIELQIGLKNYDPQKDKRFSGSVKLPHIPR
Sbjct: 1 MSKLQSEAVREAITTITGKS-EAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
PKMK+CMLGDAQHVEEAEK+GL+ MDVE YHAFLASESVIKQI
Sbjct: 60 PKMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQI 119
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGPGLNKAGKFPTLV+HQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF
Sbjct: 120 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP RIF
Sbjct: 180 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
>TAIR|locus:2042087 [details] [associations]
symbol:PGY1 "PIGGYBACK1" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015934 "large ribosomal subunit"
evidence=IEA;ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IGI]
[GO:0048569 "post-embryonic organ development" evidence=IGI]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AC006232 EMBL:AC005824 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
GO:GO:0009955 GO:GO:0048569 eggNOG:COG0081 HOGENOM:HOG000207014
ProtClustDB:CLSN2687446 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:AF360146 EMBL:AY056371 EMBL:AY081263
EMBL:BT006262 EMBL:Z27264 IPI:IPI00541952 PIR:A84674
RefSeq:NP_565654.1 RefSeq:NP_850104.1 UniGene:At.19006
ProteinModelPortal:P59230 SMR:P59230 STRING:P59230 PaxDb:P59230
PRIDE:P59230 EnsemblPlants:AT2G27530.1 EnsemblPlants:AT2G27530.2
GeneID:817299 KEGG:ath:AT2G27530 GeneFarm:212 TAIR:At2g27530
InParanoid:P59230 OMA:MSICILG PhylomeDB:P59230
Genevestigator:P59230 GermOnline:AT2G27530 Uniprot:P59230
Length = 216
Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
Identities = 178/217 (82%), Positives = 190/217 (87%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSKLQS+A+REA+++I S+E KKRNF ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPR
Sbjct: 1 MSKLQSEAVREAITTIKGKSEE-KKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
PKMK+CMLGDAQHVEEAEK+GL MDVE YHAFLASESVIKQI
Sbjct: 60 PKMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQI 119
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGPGLNKAGKFPTLV+HQESLE+KVNETKATVKFQLKKVLCMGVAVGNLSMEEKQ+F
Sbjct: 120 PRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLF 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGP RIF
Sbjct: 180 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
>FB|FBgn0036213 [details] [associations]
symbol:RpL10Ab "Ribosomal protein L10Ab" species:7227
"Drosophila melanogaster" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
EMBL:AE014296 GO:GO:0051298 GO:GO:0005811 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000022 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:GPRNKMP EMBL:BT014654 RefSeq:NP_648514.1
UniGene:Dm.23143 ProteinModelPortal:Q9VTP4 SMR:Q9VTP4 IntAct:Q9VTP4
MINT:MINT-1551463 STRING:Q9VTP4 PaxDb:Q9VTP4 PRIDE:Q9VTP4
EnsemblMetazoa:FBtr0076032 GeneID:39338 KEGG:dme:Dmel_CG7283
CTD:39338 FlyBase:FBgn0036213 GeneTree:ENSGT00390000008767
InParanoid:Q9VTP4 OrthoDB:EOG4T76KC PhylomeDB:Q9VTP4
ChiTaRS:RpL10Ab GenomeRNAi:39338 NextBio:813157 Bgee:Q9VTP4
GermOnline:CG7283 Uniprot:Q9VTP4
Length = 217
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 131/216 (60%), Positives = 165/216 (76%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L E V+ +++ S + KKR F ET+ELQIGLKNYDPQKDKRFSG+VKL HIPRP
Sbjct: 3 SKVSRDTLYEGVNGLLEASAK-KKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
KMKVC+LGD QH +EA+ +D+MD E Y AFLASES+IKQIP
Sbjct: 62 KMKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
RLLGPGLNKAGKFP L++HQES+ K+ E K+T+KFQ+KKVLC+ VAVG++ M+ ++ Q
Sbjct: 122 RLLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQ 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
NV +S+NFLVSLLKKNWQNVR L++KS+MGP R++
Sbjct: 182 NVNLSINFLVSLLKKNWQNVRSLHVKSSMGPPQRLY 217
>CGD|CAL0005037 [details] [associations]
symbol:RPL10A species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 CGD:CAL0005037 Prosite:PS01199 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AACQ01000155 EMBL:AACQ01000154
GO:GO:0015934 SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:AJ011417 RefSeq:XP_712505.1
RefSeq:XP_712535.1 ProteinModelPortal:Q9UVJ4 SMR:Q9UVJ4
STRING:Q9UVJ4 GeneID:3645843 GeneID:3645868 KEGG:cal:CaO19.10969
KEGG:cal:CaO19.3465 Uniprot:Q9UVJ4
Length = 217
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 126/217 (58%), Positives = 160/217 (73%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ S +RE V +++YS ETKKRNF ET+ELQ+GLKNYDPQ+DKRFSG++KLP +PR
Sbjct: 1 MSKITSSGVRENVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P M +C+ GDA V+ A+ +G+D M V+ Y+AF+ASE +IKQI
Sbjct: 61 PNMTICIFGDAFDVDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQI 120
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGP L+KAGKFPT V+H + L SKV + K+T+KFQLKKVLC+ VAVGN+ MEE +
Sbjct: 121 PRLLGPTLSKAGKFPTPVSHNDDLYSKVTDVKSTIKFQLKKVLCLAVAVGNVDMEEDVLV 180
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
+ M+ NFLVSLLKKNWQNV L +KSTMGPS RI+
Sbjct: 181 NQIMMAANFLVSLLKKNWQNVGSLVIKSTMGPSFRIY 217
>ZFIN|ZDB-GENE-030131-2025 [details] [associations]
symbol:rpl10a "ribosomal protein L10a"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
ZFIN:ZDB-GENE-030131-2025 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG GeneTree:ENSGT00390000008767
CTD:4736 HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:BC059454
EMBL:BC071510 IPI:IPI00500253 RefSeq:NP_955930.1 UniGene:Dr.26808
ProteinModelPortal:Q6PC69 STRING:Q6PC69 PRIDE:Q6PC69
Ensembl:ENSDART00000062983 GeneID:323305 KEGG:dre:323305
InParanoid:Q6PC69 NextBio:20808180 ArrayExpress:Q6PC69 Bgee:Q6PC69
Uniprot:Q6PC69
Length = 216
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 128/217 (58%), Positives = 159/217 (73%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ D L EAV VQ KKR F ET+ELQI LKNYDPQKDKRFSG+V+L PR
Sbjct: 1 MSKVSRDTLYEAVKE-VQAGSRRKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
PK VC+LGD QH +EA+ L +MD+E Y AFLASES+IKQI
Sbjct: 60 PKFSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQI 119
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PR+LGPGLNKAGKFP+L+TH E+L +KV+E K+T+KFQ+KKVLC+ VAVG++ M E+++
Sbjct: 120 PRILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELV 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 180 YNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
>UNIPROTKB|Q5E9E6 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081 HOGENOM:HOG000207014
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
OMA:GPRNKMP GeneTree:ENSGT00390000008767 EMBL:BT020974
EMBL:BC102653 IPI:IPI00710091 RefSeq:NP_001015647.1
UniGene:Bt.49789 UniGene:Bt.63495 ProteinModelPortal:Q5E9E6
SMR:Q5E9E6 STRING:Q5E9E6 PRIDE:Q5E9E6 Ensembl:ENSBTAT00000025963
GeneID:533310 KEGG:bta:533310 CTD:4736 HOVERGEN:HBG055239
InParanoid:Q5E9E6 OrthoDB:EOG4HQDKC NextBio:20875996 Uniprot:Q5E9E6
Length = 217
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 121/216 (56%), Positives = 160/216 (74%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>UNIPROTKB|E2R9V0 [details] [associations]
symbol:RPL10A "Ribosomal protein" species:9615 "Canis lupus
familiaris" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
GeneTree:ENSGT00390000008767 EMBL:AAEX03008269
ProteinModelPortal:E2R9V0 PRIDE:E2R9V0 Ensembl:ENSCAFT00000002038
NextBio:20850823 Uniprot:E2R9V0
Length = 217
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 121/216 (56%), Positives = 160/216 (74%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>UNIPROTKB|P62906 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0005739 Reactome:REACT_116125 EMBL:CH471081 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0009653
SUPFAM:SSF56808 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
EMBL:AL022721 KO:K02865 GO:GO:0006614 GO:GO:0022625 GO:GO:0019083
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG CTD:4736
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:U12404 EMBL:AB082926
EMBL:BT020040 EMBL:BT020041 EMBL:AK313181 EMBL:BC006791
EMBL:BC011366 EMBL:BC070216 IPI:IPI00412579 RefSeq:NP_009035.3
UniGene:Hs.148340 UniGene:Hs.546269 ProteinModelPortal:P62906
SMR:P62906 IntAct:P62906 MINT:MINT-4999991 STRING:P62906
PhosphoSite:P62906 DMDM:51702773 SWISS-2DPAGE:P62906 PaxDb:P62906
PRIDE:P62906 DNASU:4736 Ensembl:ENST00000322203 GeneID:4736
KEGG:hsa:4736 UCSC:uc003okp.1 GeneCards:GC06P035582 HGNC:HGNC:10299
neXtProt:NX_P62906 PharmGKB:PA34661 InParanoid:P62906
PhylomeDB:P62906 ChiTaRS:RPL10A GenomeRNAi:4736 NextBio:18266
Bgee:P62906 CleanEx:HS_RPL10A Genevestigator:P62906
GermOnline:ENSG00000198755 Uniprot:P62906
Length = 217
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 121/216 (56%), Positives = 160/216 (74%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>RGD|620497 [details] [associations]
symbol:Rpl10a "ribosomal protein L10A" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO;TAS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 RGD:620497 Prosite:PS01199 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:GPRNKMP
GeneTree:ENSGT00390000008767 CTD:4736 HOVERGEN:HBG055239
OrthoDB:EOG4HQDKC EMBL:X93352 EMBL:BC058468 IPI:IPI00339012
PIR:JC4677 RefSeq:NP_112327.1 UniGene:Rn.161731 UniGene:Rn.2262
ProteinModelPortal:P62907 SMR:P62907 IntAct:P62907 STRING:P62907
PhosphoSite:P62907 PRIDE:P62907 Ensembl:ENSRNOT00000000603
GeneID:81729 KEGG:rno:81729 UCSC:RGD:620497 InParanoid:P62907
NextBio:615392 Genevestigator:P62907 GermOnline:ENSRNOG00000000505
Uniprot:P62907
Length = 217
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 121/216 (56%), Positives = 160/216 (74%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>WB|WBGene00004412 [details] [associations]
symbol:rpl-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0003723
GO:GO:0003735 EMBL:FO081777 GO:GO:0015934 SUPFAM:SSF56808 KO:K02865
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
GeneTree:ENSGT00390000008767 RefSeq:NP_491061.1
ProteinModelPortal:Q9N4I4 SMR:Q9N4I4 DIP:DIP-25861N IntAct:Q9N4I4
MINT:MINT-1038891 STRING:Q9N4I4 PaxDb:Q9N4I4 PRIDE:Q9N4I4
EnsemblMetazoa:Y71F9AL.13a.1 EnsemblMetazoa:Y71F9AL.13a.2
GeneID:171853 KEGG:cel:CELE_Y71F9AL.13 UCSC:Y71F9AL.13a.1
CTD:171853 WormBase:Y71F9AL.13a InParanoid:Q9N4I4 NextBio:872975
ArrayExpress:Q9N4I4 Uniprot:Q9N4I4
Length = 216
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 123/217 (56%), Positives = 161/217 (74%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ ++L EA++ +++ S E K R F ETIELQIGLKNYDPQKDKRFSGS++L HIPR
Sbjct: 1 MSKVSRESLNEAIAEVLKGSSE-KPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P MKVC+ GD H++EA + M + Y AF+ASES+IKQI
Sbjct: 60 PNMKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQI 119
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PR+LGPGLNKAGKFP++VTH ESL+SK +E +ATVKFQ+KKVLC+ VAVG++ + ++++
Sbjct: 120 PRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELV 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ +S+NFLVSLLKKNWQNVR L +KSTMG R++
Sbjct: 180 SNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
>MGI|MGI:1343877 [details] [associations]
symbol:Rpl10a "ribosomal protein L10A" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 MGI:MGI:1343877 Prosite:PS01199
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 HOGENOM:HOG000207014
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC ChiTaRS:RPL10A EMBL:U12403
EMBL:D10916 IPI:IPI00127085 UniGene:Mm.336955 UniGene:Mm.467207
ProteinModelPortal:P53026 SMR:P53026 IntAct:P53026 STRING:P53026
PhosphoSite:P53026 PaxDb:P53026 PRIDE:P53026 InParanoid:P53026
CleanEx:MM_RPL10A Genevestigator:P53026
GermOnline:ENSMUSG00000037805 GermOnline:ENSMUSG00000061631
Uniprot:P53026
Length = 217
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 120/216 (55%), Positives = 159/216 (73%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +E + + + +MD+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDERKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>GENEDB_PFALCIPARUM|PF14_0391 [details] [associations]
symbol:PF14_0391 "ribosomal protein L1,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014187 SUPFAM:SSF56808 KO:K02865
GO:GO:0022625 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:GPRNKMP ProtClustDB:PTZ00029
RefSeq:XP_001348565.1 ProteinModelPortal:Q8IL58 MINT:MINT-1664387
PRIDE:Q8IL58 EnsemblProtists:PF14_0391:mRNA GeneID:811973
KEGG:pfa:PF14_0391 EuPathDB:PlasmoDB:PF3D7_1441200 Uniprot:Q8IL58
Length = 217
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 121/217 (55%), Positives = 164/217 (75%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSKL D L++A+S + + +K+ KKR F ETIELQIGLK+YD Q+DKRFSG+V+L + R
Sbjct: 1 MSKLNQDLLKKAISDVFEGTKQ-KKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
K+KVC+LGDA HVEEA+K+ LDYMD+E Y AFLAS+ ++ QI
Sbjct: 60 KKLKVCILGDAVHVEEAQKLELDYMDIEAMKKLNKDKTLVKKLAKKYDAFLASQVILPQI 119
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
P+LLGPGLNKAGKFP+L+TH + + K+ E K+++KFQLKKVLCMGV VG+ +++E+++
Sbjct: 120 PKLLGPGLNKAGKFPSLITHNDKINDKILELKSSIKFQLKKVLCMGVPVGHANLKEEELR 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++NFLVSLLKKNWQN+R L++KSTMG RI+
Sbjct: 180 SNIVHAINFLVSLLKKNWQNIRTLHIKSTMGKPQRIY 216
>UNIPROTKB|Q8IL58 [details] [associations]
symbol:PF14_0391 "60S ribosomal protein L1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
OMA:GPRNKMP ProtClustDB:PTZ00029 RefSeq:XP_001348565.1
ProteinModelPortal:Q8IL58 MINT:MINT-1664387 PRIDE:Q8IL58
EnsemblProtists:PF14_0391:mRNA GeneID:811973 KEGG:pfa:PF14_0391
EuPathDB:PlasmoDB:PF3D7_1441200 Uniprot:Q8IL58
Length = 217
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 121/217 (55%), Positives = 164/217 (75%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSKL D L++A+S + + +K+ KKR F ETIELQIGLK+YD Q+DKRFSG+V+L + R
Sbjct: 1 MSKLNQDLLKKAISDVFEGTKQ-KKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
K+KVC+LGDA HVEEA+K+ LDYMD+E Y AFLAS+ ++ QI
Sbjct: 60 KKLKVCILGDAVHVEEAQKLELDYMDIEAMKKLNKDKTLVKKLAKKYDAFLASQVILPQI 119
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
P+LLGPGLNKAGKFP+L+TH + + K+ E K+++KFQLKKVLCMGV VG+ +++E+++
Sbjct: 120 PKLLGPGLNKAGKFPSLITHNDKINDKILELKSSIKFQLKKVLCMGVPVGHANLKEEELR 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++NFLVSLLKKNWQN+R L++KSTMG RI+
Sbjct: 180 SNIVHAINFLVSLLKKNWQNIRTLHIKSTMGKPQRIY 216
>SGD|S000006141 [details] [associations]
symbol:RPL1A "Ribosomal 60S subunit protein L1A" species:4932
"Saccharomyces cerevisiae" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000006141
Prosite:PS01199 GO:GO:0003723 EMBL:BK006949 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 RefSeq:NP_011380.3 GeneID:852742
KEGG:sce:YGL135W KO:K02865 GO:GO:0022625 KO:K00987
RefSeq:NP_011385.3 GeneID:852747 KEGG:sce:YGL130W
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673 PDB:1K5Y
PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDBsum:1K5Y PDBsum:1S1I
PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDB:2NOQ PDBsum:2NOQ
EMBL:X70985 EMBL:Z73576 PIR:S53893 RefSeq:NP_015104.1
ProteinModelPortal:P0CX43 SMR:P0CX43 EnsemblFungi:YGL135W
EnsemblFungi:YPL220W GeneID:855881 KEGG:sce:YPL220W CYGD:YPL220w
EvolutionaryTrace:P0CX43 NextBio:972159 ArrayExpress:P0CX43
GermOnline:YPL220W Uniprot:P0CX43
Length = 217
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 122/217 (56%), Positives = 158/217 (72%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ S +RE V +++YS ETKKRNF ET+ELQ+GLKNYDPQ+DKRFSGS+KLP+ PR
Sbjct: 1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P M +C+ GDA V+ A+ G+D M V+ Y+AF+ASE +IKQ+
Sbjct: 61 PNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQV 120
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGP L+KAGKFPT V+H + L KV + ++T+KFQLKKVLC+ VAVGN+ MEE +
Sbjct: 121 PRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLV 180
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
+ MSVNF VSLLKKNWQNV L +KS+MGP+ R++
Sbjct: 181 NQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
>SGD|S000003103 [details] [associations]
symbol:RPL1B "Ribosomal 60S subunit protein L1B" species:4932
"Saccharomyces cerevisiae" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000003103
Prosite:PS01199 EMBL:BK006941 GO:GO:0003723 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 EMBL:X92670 RefSeq:NP_011380.3
GeneID:852742 KEGG:sce:YGL135W KO:K02865 GO:GO:0022625 KO:K00987
RefSeq:NP_011385.3 GeneID:852747 KEGG:sce:YGL130W
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
GeneTree:ENSGT00390000008767 PIR:S53893 RefSeq:NP_015104.1
EnsemblFungi:YGL135W EnsemblFungi:YPL220W GeneID:855881
KEGG:sce:YPL220W NextBio:972159 EMBL:X70986 EMBL:Z72657
ProteinModelPortal:P0CX44 SMR:P0CX44 CYGD:YGL135w
ArrayExpress:P0CX44 GermOnline:YGL135W Uniprot:P0CX44
Length = 217
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 122/217 (56%), Positives = 158/217 (72%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ S +RE V +++YS ETKKRNF ET+ELQ+GLKNYDPQ+DKRFSGS+KLP+ PR
Sbjct: 1 MSKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P M +C+ GDA V+ A+ G+D M V+ Y+AF+ASE +IKQ+
Sbjct: 61 PNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQV 120
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGP L+KAGKFPT V+H + L KV + ++T+KFQLKKVLC+ VAVGN+ MEE +
Sbjct: 121 PRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLV 180
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
+ MSVNF VSLLKKNWQNV L +KS+MGP+ R++
Sbjct: 181 NQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
>RGD|1559639 [details] [associations]
symbol:RGD1559639 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1559639 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
IPI:IPI00781415 RefSeq:XP_001080284.1 RefSeq:XP_345687.1
Ensembl:ENSRNOT00000059150 GeneID:366656 KEGG:rno:366656
UCSC:RGD:1559639 CTD:366656 NextBio:689802 Uniprot:D3ZBX4
Length = 217
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 119/216 (55%), Positives = 158/216 (73%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSHDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKVVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNK GKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKVGKFPSLMTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDKLVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG ++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQHLY 217
>RGD|1566137 [details] [associations]
symbol:RGD1566137 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1566137 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 OMA:VAVGHMK Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
EMBL:AC095904 IPI:IPI00369431 RefSeq:XP_001071067.1
RefSeq:XP_217361.3 Ensembl:ENSRNOT00000044603 GeneID:301299
KEGG:rno:301299 UCSC:RGD:1566137 CTD:301299 NextBio:648511
Uniprot:D4A7Y6
Length = 217
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 118/216 (54%), Positives = 158/216 (73%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + +MD+E Y FLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLDKKYDGFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KK+LC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKLLCLAVAVGHMKMTDDELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG ++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQHLY 217
>DICTYBASE|DDB_G0276871 [details] [associations]
symbol:rpl10a "S60 ribosomal protein L10a"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 dictyBase:DDB_G0276871 Prosite:PS01199
GO:GO:0005615 GO:GO:0006412 GenomeReviews:CM000151_GR GO:GO:0003723
GO:GO:0003735 EMBL:AAFI02000019 GO:GO:0015934 SUPFAM:SSF56808
KO:K02865 eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_642967.1 HSSP:P49626 ProteinModelPortal:Q86L05
STRING:Q86L05 PRIDE:Q86L05 EnsemblProtists:DDB0229949
GeneID:8620839 KEGG:ddi:DDB_G0276871 OMA:ITNDSRE
ProtClustDB:PTZ00029 Uniprot:Q86L05
Length = 217
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 115/218 (52%), Positives = 161/218 (73%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ SD +R VS + + ++E+K R F ET+ELQI LKNYD +KDKRFSG +K+ + +
Sbjct: 1 MSKISSDQVRSIVSQLFKEAQESK-RGFLETVELQINLKNYDTKKDKRFSGQIKIGTVTK 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXX-XXXXXXXXXXXXYHAFLASESVIKQ 119
PK+ VC+ D QH +EA KIG ++MD+E Y AFLASES+++Q
Sbjct: 60 PKLSVCVFADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQ 119
Query: 120 IPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQI 179
+P+LLGPGLNK GKFPTL+TH E + SK+N+ K+TVKFQLKKVLC+ VAVG++ + E+++
Sbjct: 120 VPKLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREV 179
Query: 180 FQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ S+NFLVSLLKK WQN++ LY+K++MGPS+R++
Sbjct: 180 ATNIIQSINFLVSLLKKGWQNIKTLYVKTSMGPSHRVY 217
>UNIPROTKB|G3X7N2 [details] [associations]
symbol:G3X7N2 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:DAAA02002354
Ensembl:ENSBTAT00000039021 OMA:EHIYENI NextBio:20924953
Uniprot:G3X7N2
Length = 217
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 118/216 (54%), Positives = 157/216 (72%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ + L EAV ++ + + K R F ET++LQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRNTLYEAVREVL-HGNQRKHRKFLETVKLQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + + D+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHTDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNKAGKFP+L+TH E++ +KV E K+T+KFQ+KKVLC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVGEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>ASPGD|ASPL0000057044 [details] [associations]
symbol:AN1122 species:162425 "Emericella nidulans"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:BN001308
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
EnsemblFungi:CADANIAT00001506 Uniprot:C8VTC4
Length = 217
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 115/217 (52%), Positives = 157/217 (72%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ +R+ V ++ YS+ KKRNF ET+ELQIGLKNYDPQ+DKRFSG++KLP +PR
Sbjct: 1 MSKITVAGVRQNVEQLLNYSQNEKKRNFLETVELQIGLKNYDPQRDKRFSGTIKLPTVPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P M +C+LGD ++ A+ G+D M + Y AFLAS+ +IKQI
Sbjct: 61 PGMTICVLGDQHDLDRAKHHGIDAMSADDLKKLNKNKKLIKKLARKYDAFLASDGLIKQI 120
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGPGL+KAGKFPT V+H E + +KVN+ K+T+KFQLKKVLC+GVAVGN+ M ++++
Sbjct: 121 PRLLGPGLSKAGKFPTPVSHNEDMANKVNDVKSTIKFQLKKVLCLGVAVGNVGMTQEELV 180
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ +++N+LVSLLKK WQNV L +K+TM P R++
Sbjct: 181 ANIMLAINYLVSLLKKGWQNVGSLVIKATMSPPRRVY 217
>UNIPROTKB|G4MTC2 [details] [associations]
symbol:MGG_04696 "Ribosomal protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0043581 EMBL:CM001232 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 RefSeq:XP_003713675.1 ProteinModelPortal:G4MTC2
SMR:G4MTC2 EnsemblFungi:MGG_04696T0 GeneID:2678194
KEGG:mgr:MGG_04696 Uniprot:G4MTC2
Length = 217
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 118/217 (54%), Positives = 155/217 (71%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ +R V ++ YS TKKRNF ET+ELQIGLKNYDPQ+DKRFSG++KLP +PR
Sbjct: 1 MSKITVAGVRSNVGELLDYSLNTKKRNFLETVELQIGLKNYDPQRDKRFSGTIKLPVVPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P M +C+LGD ++ A+ G+D M + Y AF+AS+++IKQI
Sbjct: 61 PNMAICILGDQHDLDRAKHGGIDSMSADDLKKLNKNKKLIKKLARKYDAFIASDTLIKQI 120
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGPGL+KAGKFPT V+H + L KV E K+T+KFQLKKVLCMGVAVGN+ M ++Q+
Sbjct: 121 PRLLGPGLSKAGKFPTPVSHADDLSGKVTEVKSTIKFQLKKVLCMGVAVGNVEMTQEQLV 180
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ +++N+LVSLLKK WQNV L +K+TM P RI+
Sbjct: 181 GNIMLAINYLVSLLKKGWQNVGSLTIKATMSPPKRIY 217
>POMBASE|SPCC1183.08c [details] [associations]
symbol:rpl101 "60S ribosomal protein L10a" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155
PomBase:SPCC1183.08c Prosite:PS01199 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
SUPFAM:SSF56808 KO:K02865 GO:GO:0022625 eggNOG:COG0081
HOGENOM:HOG000207014 OMA:VAVGHMK Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OrthoDB:EOG40ZV6T PIR:T40848
RefSeq:NP_587891.1 ProteinModelPortal:O74836 SMR:O74836
STRING:O74836 EnsemblFungi:SPCC1183.08c.1 GeneID:2539222
KEGG:spo:SPCC1183.08c NextBio:20800392 Uniprot:O74836
Length = 216
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 120/217 (55%), Positives = 161/217 (74%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ ++R V I++ S+E KKRNFTET+ELQIGLKNYDPQ+DKRFSG++KLP++PR
Sbjct: 1 MSKVSVASVRSNVEQILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P M +C+LGDA ++ A+ G+D M V+ Y AF+ASE +IKQI
Sbjct: 60 PNMAICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQI 119
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGPGL+KAGKFP+ V+H + L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+
Sbjct: 120 PRLLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLI 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKK WQN+ L +KSTMG +R++
Sbjct: 180 ANIMLAVNFLVSLLKKGWQNIGSLVVKSTMGKPHRLY 216
>UNIPROTKB|E1BKD0 [details] [associations]
symbol:E1BKD0 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:DAAA02006245
IPI:IPI00730587 Ensembl:ENSBTAT00000002846 OMA:MEDEAIA
NextBio:20928490 Uniprot:E1BKD0
Length = 217
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 116/216 (53%), Positives = 158/216 (73%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ + L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRNTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + ++D+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHVDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNKAGKFP+L+TH ++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNGNMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQN+R LY+KSTMG ++
Sbjct: 182 NIHLAVNFLVSLLKKNWQNIRALYIKSTMGKPQHLY 217
>RGD|1588266 [details] [associations]
symbol:LOC680700 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1588266 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OMA:MEDEAIA
IPI:IPI00358998 Ensembl:ENSRNOT00000015278 Uniprot:F1LYQ7
Length = 222
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 120/222 (54%), Positives = 158/222 (71%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ D L EAV ++ + + K+R F ET+ELQI LKNYDPQKDKRFSG+VKL PR
Sbjct: 2 MSKVSRDTLYEAVREVL-HGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVKLKSTPR 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXX-----YHAFLASES 115
PK VC+LGD QH +E + + + +MD+E Y AFL SES
Sbjct: 61 PKFSVCVLGDQQHCDEVKAVDIPHMDIEALKKLNKNKKLVKMLAKKKKKKKYDAFLVSES 120
Query: 116 VIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSME 175
+IKQIPR+L PGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M
Sbjct: 121 LIKQIPRILSPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMT 180
Query: 176 EKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
+ ++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 181 DDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 222
>POMBASE|SPBC30D10.18c [details] [associations]
symbol:rpl102 "60S ribosomal protein L10a"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 PomBase:SPBC30D10.18c Prosite:PS01199
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG PIR:T40178 RefSeq:NP_596267.1
ProteinModelPortal:O14363 SMR:O14363 STRING:O14363 PRIDE:O14363
EnsemblFungi:SPBC30D10.18c.1 GeneID:2540378 KEGG:spo:SPBC30D10.18c
OrthoDB:EOG40ZV6T NextBio:20801506 Uniprot:O14363
Length = 216
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 119/217 (54%), Positives = 161/217 (74%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
MSK+ +R +V +I++ S+E KKRNFTET+ELQIGLKNYDPQ+DKRFSG++KLP++PR
Sbjct: 1 MSKVSPANIRSSVETILKGSEE-KKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPR 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P M +C+LGDA ++ A+ G+D M V+ Y AF+ASE +IKQI
Sbjct: 60 PNMSICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQI 119
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGPGL+KAGKFP+ V+H + L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+
Sbjct: 120 PRLLGPGLSKAGKFPSPVSHSDDLYGKIIEVKSTIKFQLKKVLCLGVAVGHVDMAEEQLA 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ +++NFLVSLLKK WQN+ L +KSTMG R++
Sbjct: 180 ANLSLAINFLVSLLKKGWQNIGSLVIKSTMGKPYRLY 216
>UNIPROTKB|Q6EE62 [details] [associations]
symbol:RPL10A "Ribosomal protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 SUPFAM:SSF56808 GO:GO:0022625 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG GeneTree:ENSGT00390000008767
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:AC140943 EMBL:AY389961
IPI:IPI00596886 UniGene:Gga.4632 STRING:Q6EE62
Ensembl:ENSGALT00000004168 InParanoid:Q6EE62 Uniprot:Q6EE62
Length = 184
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 107/184 (58%), Positives = 138/184 (75%)
Query: 11 EAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGD 70
EAV ++Q SK TKKR F ET+ELQI LKNYDPQKDKRFSG+V+L PRPK VC+LGD
Sbjct: 2 EAVKEVLQGSK-TKKRKFVETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCLLGD 60
Query: 71 AQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNK 130
QH +EA+ + + +MD+E Y AFLASES+IKQIPR+LGPGLNK
Sbjct: 61 QQHCDEAKAVEIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNK 120
Query: 131 AGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFL 190
AGKFP+L+TH E+L +KV+E K+T+KFQ+KKVLC+ VAVG++ M E ++ N+ +++NFL
Sbjct: 121 AGKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVYNIHLAINFL 180
Query: 191 VSLL 194
VSLL
Sbjct: 181 VSLL 184
>RGD|1562962 [details] [associations]
symbol:RGD1562962 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1562962 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
IPI:IPI00361962 PRIDE:D3Z9F6 Ensembl:ENSRNOT00000045023
Uniprot:D3Z9F6
Length = 217
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 104/207 (50%), Positives = 144/207 (69%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L +AV ++ Y K+ F + +ELQI LKNY PQKDKRFSG+++L P
Sbjct: 3 SKVSRDTLYKAVQEVL-YGNRCKRCKFLDMVELQISLKNYHPQKDKRFSGTIRLKSTPCS 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC+LGD QH +EA+ + + MD+E Y FLASES+IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPAMDIEALKKLNKNKKLVKKLAKKYDVFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
R+LGPGLNK GKFP+L+TH E++ +KV++ K+T+KFQ+KKVL + VAVG+++M ++
Sbjct: 122 RILGPGLNKVGKFPSLLTHNENMVAKVDKVKSTIKFQMKKVLRLAVAVGHVNMTNGELVY 181
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKS 208
N+ ++VNFLVSLLKKNWQN++ LY+KS
Sbjct: 182 NIHLAVNFLVSLLKKNWQNLQALYIKS 208
>UNIPROTKB|J9P122 [details] [associations]
symbol:J9P122 "Ribosomal protein" species:9615 "Canis lupus
familiaris" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 GeneTree:ENSGT00390000008767
EMBL:AAEX03003165 Ensembl:ENSCAFT00000029650 Uniprot:J9P122
Length = 207
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 111/216 (51%), Positives = 146/216 (67%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L E V V + + K R F E +ELQI LKNYDPQ+DK FSG+V+L PRP
Sbjct: 3 SKVSHDTLYEVVRE-VPHGNQCKHRKFLEMVELQISLKNYDPQQDKCFSGTVRLKS-PRP 60
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K + QH +EA+ + + +MD+E Y AFLASES+IKQIP
Sbjct: 61 KFQ-------QHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAK-YDAFLASESLIKQIP 112
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
+LGPGLNKAGKFP+L+TH E++ KV+E K+T+KFQ+K VLC+ VAVG++ M ++
Sbjct: 113 -ILGPGLNKAGKFPSLLTHNENMVGKVDEVKSTIKFQMKTVLCLAVAVGHVKMTGDELVY 171
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 172 NIHLTVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 207
>UNIPROTKB|F1M8D2 [details] [associations]
symbol:F1M8D2 "Ribosomal protein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 IPI:IPI00569398
Ensembl:ENSRNOT00000041472 Uniprot:F1M8D2
Length = 186
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 90/171 (52%), Positives = 123/171 (71%)
Query: 27 NFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMD 86
+F +ELQI LKNYD QKDK FSG+V+L P PK VC+LGD QH +EA+ + + +MD
Sbjct: 16 SFWRPLELQISLKNYDSQKDKHFSGTVRLKSTPHPKFSVCILGDQQHWDEAKAVDIPHMD 75
Query: 87 VEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLES 146
+E Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E++ +
Sbjct: 76 IEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVA 135
Query: 147 KVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKN 197
KV+E K+ ++FQ++KVLC+ VAVG++ M + ++ N+ ++VNFL SLLKKN
Sbjct: 136 KVDEVKSAIEFQMRKVLCLAVAVGHVKMTDDELVYNIHLAVNFLASLLKKN 186
>UNIPROTKB|F1RS60 [details] [associations]
symbol:F1RS60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:CU639466
Ensembl:ENSSSCT00000012272 Uniprot:F1RS60
Length = 218
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 102/214 (47%), Positives = 139/214 (64%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ + L EAV ++ + K F E ELQI LKNYDPQKDK F G+++L P
Sbjct: 3 SKVSGNTLYEAVWEVLD-GNQCK---FLEMAELQISLKNYDPQKDKGFWGTIRLKSTLHP 58
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K + +LGD QH +EA+ + + +MD+E AFLASES+IKQIP
Sbjct: 59 KFSMYILGDQQHCDEAKAVDILHMDIEALKKLNKNKKLVKKLAKKCDAFLASESLIKQIP 118
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATV----KFQLKKVLCMGVAVGNLSMEEK 177
R+L GLNKAGKFP+L+TH E + +KV+E K+ + FQ+KKVLC+ VAVG++ M +
Sbjct: 119 RILDRGLNKAGKFPSLLTHSEKMVAKVDEVKSKIIDKIMFQMKKVLCLAVAVGHVKMIDD 178
Query: 178 QIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG 211
++ N+ ++VNF VSLLKKNWQN+ LY+KSTMG
Sbjct: 179 ELVYNIHLAVNFPVSLLKKNWQNLWALYIKSTMG 212
>FB|FBgn0038281 [details] [associations]
symbol:RpL10Aa "Ribosomal protein L10Aa" species:7227
"Drosophila melanogaster" [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 EMBL:AE014297
GO:GO:0006911 GO:GO:0022008 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 KO:K02865
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:AY113239 RefSeq:NP_650410.1
UniGene:Dm.13335 SMR:Q9VFE0 STRING:Q9VFE0
EnsemblMetazoa:FBtr0083024 GeneID:41811 KEGG:dme:Dmel_CG3843
UCSC:CG3843-RA CTD:41811 FlyBase:FBgn0038281 InParanoid:Q9VFE0
OrthoDB:EOG476HGD ChiTaRS:RpL10Aa GenomeRNAi:41811 NextBio:825679
Uniprot:Q9VFE0
Length = 216
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 98/217 (45%), Positives = 144/217 (66%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
+SK+ D + AV +I+ S + K + ET+ELQIGL++YDP K KRF GSV L H+
Sbjct: 2 VSKVSRDTIYVAVKNILLNS-QAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAV 60
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
P++KVC+ GD +H +A+ IG+D +DVE Y FLASES+IKQI
Sbjct: 61 PQLKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQI 120
Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
PRLLGPGL AGKF T + ES+ SK+ + +T K +K++ C+ V VG++ M +++
Sbjct: 121 PRLLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELA 179
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
+N+ +S+NFLVSLLK NWQNVR L++KS++G ++++
Sbjct: 180 RNIAISINFLVSLLKDNWQNVRSLHIKSSLGVPHQLY 216
>UNIPROTKB|F1RYZ5 [details] [associations]
symbol:RPL10A "Ribosomal protein" species:9823 "Sus scrofa"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:CU467978
Ensembl:ENSSSCT00000001720 OMA:THRRTNA ArrayExpress:F1RYZ5
Uniprot:F1RYZ5
Length = 176
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 87/160 (54%), Positives = 118/160 (73%)
Query: 58 IPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVI 117
+P P VC+LGD QH +EA+ + + +MD+E Y AFLASES+I
Sbjct: 18 LPAP-FSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 76
Query: 118 KQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 177
KQIPR+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M +
Sbjct: 77 KQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDD 136
Query: 178 QIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
++ N+ ++VNFLVSLLKKNWQNVR LY+KSTMG R++
Sbjct: 137 ELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 176
>UNIPROTKB|P53027 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9823
"Sus scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:F14821
STRING:P53027 PRIDE:P53027 Uniprot:P53027
Length = 165
Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 87/164 (53%), Positives = 112/164 (68%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
SK+ D L EAV ++ + + F ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 3 SKVSRDTLYEAVREVL-HGNQRNXXKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
K VC LGD QH +EA+ + + +MD+E Y AFLASES+IKQIP
Sbjct: 62 KFSVCXLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCM 165
R+LGPGLNKAGKFP+L+TH + +KV+E K+ VKFQ+K+VLC+
Sbjct: 122 RILGPGLNKAGKFPSLLTHNXDMVAKVDEVKSRVKFQMKEVLCL 165
>UNIPROTKB|F1SCR8 [details] [associations]
symbol:F1SCR8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:CU856159 EMBL:CU928236
Ensembl:ENSSSCT00000009433 Ensembl:ENSSSCT00000029814
Uniprot:F1SCR8
Length = 208
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 97/216 (44%), Positives = 135/216 (62%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 61
S + S AL+E VS I++ +E F + ELQI LKN DPQK KRF G++ L P P
Sbjct: 1 SVISSPALQEEVSEILR-GREIYVSYFLKYRELQISLKNCDPQKGKRF-GTISLKSTP-P 57
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
+ VC+LGD Q +EA + ++D+E Y AFLASES+ KQIP
Sbjct: 58 QFSVCVLGDQQQCDEANPMESPHVDIEAPKKLYKNKTLAKKLAKKYDAFLASESLSKQIP 117
Query: 122 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
++ PG NKAGK P+L+T ++ +KV+E K+ +KFQ+KK+LC+ VA G++ M ++
Sbjct: 118 QIQDPGRNKAGKSPSLLTLNKNSMAKVDEVKSMIKFQMKKLLCLAVAAGHMKMT---VY- 173
Query: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNRIF 217
N ++VNFLVSLLK NWQNV LY+KS MG S ++
Sbjct: 174 NTHLAVNFLVSLLK-NWQNVWALYIKSAMGKSQCLY 208
>UNIPROTKB|I3LES0 [details] [associations]
symbol:I3LES0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:CU019576
Ensembl:ENSSSCT00000010689 Uniprot:I3LES0
Length = 194
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 82/201 (40%), Positives = 121/201 (60%)
Query: 11 EAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGD 70
EAV ++ + + K + E +ELQ LKNYDPQKDK G+++L P PK VC+L D
Sbjct: 2 EAVWEVL-HGNQCKCQKLLEKVELQFTLKNYDPQKDKHILGTIRLKSTPCPKFSVCVL-D 59
Query: 71 AQHVEEAEKIGLDYMDVEGXXXXXXXXXXX---XXXXXXYHAFLASESVIKQIPRLLGPG 127
+EA+ + + +MD+E Y F V Q+ +LGPG
Sbjct: 60 G---DEAKALDIPHMDIEALKKLNRNKKVVKKLAKLSKKYDGFFGFR-VSNQVNPILGPG 115
Query: 128 LNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSV 187
LNK GKFP L+TH +++ ++++E K+ +KFQ+KK+LC+ VAV N+ M + ++ ++V
Sbjct: 116 LNKPGKFPFLLTHNKTMMAQIDEVKSMIKFQMKKLLCLAVAVSNMKMTDDD---SIHLAV 172
Query: 188 NFLVSLLKKNWQNVRCLYLKS 208
NFLVSLLKKNWQN+R LY+ S
Sbjct: 173 NFLVSLLKKNWQNIRALYINS 193
>UNIPROTKB|J9P1H7 [details] [associations]
symbol:J9P1H7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:AAEX03015434
Ensembl:ENSCAFT00000013375 OMA:THNENIV Uniprot:J9P1H7
Length = 173
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 82/181 (45%), Positives = 117/181 (64%)
Query: 36 IGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXX 95
I LK YD K SG LP ++ +LGD QH +EA+ + + +MD++
Sbjct: 1 ISLKKYDAVKAP--SGLSLLP----AQVLHMVLGDWQHCDEAKVVDIPHMDIK-VLKKLN 53
Query: 96 XXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATV 155
Y AFLASES+IKQ P++L PGLNKAGKFP+L+TH E++ +KV+E K+T+
Sbjct: 54 KNKKKELAKKYYDAFLASESLIKQ-PQILDPGLNKAGKFPSLLTHSENMVAKVDEVKSTI 112
Query: 156 KFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPSNR 215
KFQ+K +LC+ VA+G + M + ++ N+ ++VNFLVSLLK NWQN+ L +KSTMG S
Sbjct: 113 KFQMKNMLCLAVAIGPMKMTDDELVYNIHLAVNFLVSLLK-NWQNIWALDIKSTMGNSQH 171
Query: 216 I 216
+
Sbjct: 172 L 172
>UNIPROTKB|F1Q2K0 [details] [associations]
symbol:LOC486972 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:AAEX03015831
Ensembl:ENSCAFT00000027506 OMA:NWHYLNI Uniprot:F1Q2K0
Length = 193
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 78/183 (42%), Positives = 115/183 (62%)
Query: 34 LQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXX 93
LQI L+N D Q D+RFSG+++L PR K +C+LGD QH +EA+ + + M+ E
Sbjct: 12 LQISLQNSDSQTDRRFSGTIRLKFTPRLKFSICVLGDQQHCDEAKAVVIPRMNTEALKKL 71
Query: 94 XXXXXXXXXXXXXYHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKA 153
+ AFLA ES++ QI LGP LNKAGKFP+ TH +++ +K+++ K
Sbjct: 72 NKNKKLFKKLAKKFDAFLALESLVLQI---LGPDLNKAGKFPSSKTHVKNIVAKMDDVKF 128
Query: 154 TVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRC-LYLKSTM-G 211
+K Q+KKVLC+ VAVG++ M + ++ N+Q++VNFLVSLLKK + L LK +
Sbjct: 129 MIKLQIKKVLCLPVAVGHVKMTDDELVYNIQLAVNFLVSLLKKEHHGLPPELVLKHNLIN 188
Query: 212 PSN 214
PS+
Sbjct: 189 PSS 191
>UNIPROTKB|F1RX79 [details] [associations]
symbol:F1RX79 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 Ensembl:ENSSSCT00000017239 OMA:IHNENIV
Uniprot:F1RX79
Length = 170
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 67/155 (43%), Positives = 98/155 (63%)
Query: 58 IPRPKMKVCML-GDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESV 116
+P P CM GD QH EA+ + + +MD+E Y+ FL SES+
Sbjct: 18 LPAPS---CMCSGDQQHHAEAKPVDIPHMDIEALKKHNEIKKLVKKLAKKYYVFLVSESL 74
Query: 117 IKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEE 176
I QIP L NK GKF +L+ H E++ +KV+E K+++KFQ++KVLC+ VAVG++ M +
Sbjct: 75 IHQIPCL-----NKVGKFLSLLIHNENIVAKVDEVKSSIKFQMQKVLCLAVAVGHVKMTD 129
Query: 177 KQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG 211
++ N ++VNFL+SL KKNW N++ LY+KSTMG
Sbjct: 130 DELGYNTHLAVNFLMSLFKKNWPNIQALYIKSTMG 164
>TIGR_CMR|BA_0098 [details] [associations]
symbol:BA_0098 "ribosomal protein L1" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_842666.1 RefSeq:YP_016701.1
RefSeq:YP_026384.1 ProteinModelPortal:Q81VU2 SMR:Q81VU2
DNASU:1087066 EnsemblBacteria:EBBACT00000011718
EnsemblBacteria:EBBACT00000017677 EnsemblBacteria:EBBACT00000020059
GeneID:1087066 GeneID:2814891 GeneID:2848851 KEGG:ban:BA_0098
KEGG:bar:GBAA_0098 KEGG:bat:BAS0098
BioCyc:BANT260799:GJAJ-109-MONOMER
BioCyc:BANT261594:GJ7F-111-MONOMER Uniprot:Q81VU2
Length = 230
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 57/220 (25%), Positives = 96/220 (43%)
Query: 2 SKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPR 60
+KL A + + V+ K+T F T+E L DP+K D++ G+V LPH
Sbjct: 12 AKLVDRAAAYSATEAVELVKKTNTAKFDATVEAAFRL-GVDPKKADQQIRGAVVLPHGTG 70
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQI 120
+V + + +EAE G D++ G A + ++
Sbjct: 71 KVQRVLVFAKGEKAKEAEAAGADFV---GDADYIGKIQQGWFDFDVVVATPDMMGEVGKL 127
Query: 121 PRLLGP-GLNKAGKFPTLVTHQESLESKVNETKA-TVKFQLKKVLCMGVAVGNLSMEEKQ 178
R+LGP GL K T VT + VNE KA V++++ K + V +G +S E+ +
Sbjct: 128 GRVLGPKGLMPNPKTGT-VTFD--VTKAVNEIKAGKVEYRVDKAGNIHVPIGKVSFEDAK 184
Query: 179 IFQNVQMSVNFL--VSLLKKNWQNVRCLYLKSTMGPSNRI 216
+ +N + + L V ++ + + STMGP R+
Sbjct: 185 LVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRV 224
>TAIR|locus:2041554 [details] [associations]
symbol:AT2G42650 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR023674 Pfam:PF00687 EMBL:CP002685
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 EMBL:AC007087
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 KO:K14775
EMBL:AY954832 IPI:IPI00543256 PIR:E84856 RefSeq:NP_181793.1
UniGene:At.36987 ProteinModelPortal:Q8S8D2 SMR:Q8S8D2 PRIDE:Q8S8D2
EnsemblPlants:AT2G42650.1 GeneID:818865 KEGG:ath:AT2G42650
TAIR:At2g42650 InParanoid:Q8S8D2 OMA:AELCLIV PhylomeDB:Q8S8D2
ProtClustDB:CLSN2683932 Genevestigator:Q8S8D2 Uniprot:Q8S8D2
Length = 372
Score = 127 (49.8 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 27/102 (26%), Positives = 51/102 (50%)
Query: 107 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQE-SLESKVNETKATVKFQLKKVLCM 165
Y F + VI +P+L+G ++ K P + + + + ++ + F ++ C
Sbjct: 128 YDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFMRTGSCS 187
Query: 166 GVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207
+ V LSME I +NV ++N +V +L W+ +R L+LK
Sbjct: 188 AIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLK 229
Score = 48 (22.0 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 16/67 (23%), Positives = 34/67 (50%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIE------LQIGLKNYDPQKDKRFSGSVK 54
MS++ + +AV ++V+ E + + +E L + LK PQ++ F+ + +
Sbjct: 1 MSRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKI-PQRN--FTNAYR 57
Query: 55 LPHIPRP 61
+P +P P
Sbjct: 58 IP-LPHP 63
>UNIPROTKB|Q06797 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 GO:GO:0003735 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B EMBL:D13303
EMBL:D50303 PIR:E69694 RefSeq:NP_387984.2 ProteinModelPortal:Q06797
SMR:Q06797 EnsemblBacteria:EBBACT00000001732 GeneID:936843
KEGG:bsu:BSU01030 PATRIC:18971715 GenoList:BSU01030
BioCyc:BSUB:BSU01030-MONOMER Uniprot:Q06797
Length = 232
Score = 133 (51.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 56/212 (26%), Positives = 96/212 (45%)
Query: 13 VSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDA 71
VS V K+T F T+E+ L DP+K D++ G+V LP+ +V +
Sbjct: 23 VSEAVALVKKTNTAKFDATVEVAFRL-GVDPRKNDQQIRGAVVLPNGTGKTQRVLVFAKG 81
Query: 72 QHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGP-GLNK 130
+ +EAE G D++ G A + +I R+LGP GL
Sbjct: 82 EKAKEAEAAGADFV---GDTDYINKIQQGWFDFDVIVATPDMMGEVGKIGRVLGPKGLMP 138
Query: 131 AGKFPTLVTHQESLESKVNETKA-TVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNF 189
K T VT + +E + E KA V++++ K + V +G +S E++++ +N +
Sbjct: 139 NPKTGT-VTFE--VEKAIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYD- 194
Query: 190 LVSLLKKNWQNVRCLYLK-----STMGPSNRI 216
++LK + +Y+K STMGP ++
Sbjct: 195 --TILKAKPAAAKGVYVKNVAVTSTMGPGVKV 224
>TIGR_CMR|CHY_2322 [details] [associations]
symbol:CHY_2322 "ribosomal protein L1" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 OMA:AKGRYVK
TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:YP_361131.1 ProteinModelPortal:Q3A9Q3 SMR:Q3A9Q3
STRING:Q3A9Q3 GeneID:3728765 KEGG:chy:CHY_2322 PATRIC:21277711
BioCyc:CHYD246194:GJCN-2321-MONOMER Uniprot:Q3A9Q3
Length = 231
Score = 131 (51.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 49/201 (24%), Positives = 91/201 (45%)
Query: 21 KETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVEEAEK 79
KE F ET+E+ + L DP+ D++ G+V LPH KV + + +EAE
Sbjct: 31 KELSFAKFDETVEVAVKL-GVDPRHADQQVRGAVVLPHGTGKTRKVLVFAKGEKAKEAEA 89
Query: 80 IGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGP-GLNKAGKFPTLV 138
G DY+ E + + + ++ ++LGP GL + K T V
Sbjct: 90 AGADYVGAEEYIEKIAQGWIDFDVVVATPDMMGA---VGRLGKILGPKGLMPSPKTGT-V 145
Query: 139 THQESLESKVNETKA-TVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKN 197
T + + + E KA +++++ K + V +G +S +++ +N ++ L+
Sbjct: 146 TFE--VAKAIAEIKAGKIEYRVDKAGIVHVPIGKVSFPVEKLVENFNTLMDALIKAKPAG 203
Query: 198 --WQNVRCLYLKSTMGPSNRI 216
Q ++ + + STMGP +I
Sbjct: 204 AKGQYLKGVTVSSTMGPGIKI 224
>TIGR_CMR|CBU_0227 [details] [associations]
symbol:CBU_0227 "ribosomal protein L1" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:NP_819271.1 ProteinModelPortal:Q83ET3 SMR:Q83ET3
GeneID:1208108 KEGG:cbu:CBU_0227 PATRIC:17929145
BioCyc:CBUR227377:GJ7S-233-MONOMER Uniprot:Q83ET3
Length = 232
Score = 131 (51.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 54/214 (25%), Positives = 92/214 (42%)
Query: 3 KLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRP 61
K+Q D +S ++ KE K F E+I++ I L D +K D+ G+ LPH
Sbjct: 15 KVQRDKTYP-LSEAIKLIKECAKAKFNESIDVAINL-GIDSRKSDQAIRGATVLPHGSGR 72
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
+KV + +VE+A+ G D + G A + V+ ++
Sbjct: 73 TVKVAVFAQGDNVEKAKAAGAD---IVGLDDLAERIQGGDIDFDVVIATPETMRVVGKLG 129
Query: 122 RLLGP-GLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
++LGP GL K T+ T S N + V+++ K + +G ++ EEK +
Sbjct: 130 QVLGPRGLMPNPKVGTVTTDVASAVK--NAKQGQVRYRTDKNGIIHCTIGKVNFEEKALE 187
Query: 181 QNVQMSVNFLVSLLKKNWQN--VRCLYLKSTMGP 212
+N +N + + ++ L L STMGP
Sbjct: 188 ENFLALLNDIKKAKPSAAKGTYLKKLTLSSTMGP 221
>TAIR|locus:2098979 [details] [associations]
symbol:AT3G58660 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR023674 Pfam:PF00687 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
EMBL:AL353032 Gene3D:3.30.190.20 eggNOG:NOG247516 KO:K14775
OMA:IEKACGS ProtClustDB:CLSN2683932 EMBL:AY070404 IPI:IPI00521804
PIR:T49149 RefSeq:NP_191425.1 ProteinModelPortal:Q9LXT5 SMR:Q9LXT5
STRING:Q9LXT5 PaxDb:Q9LXT5 PRIDE:Q9LXT5 EnsemblPlants:AT3G58660.1
GeneID:825035 KEGG:ath:AT3G58660 TAIR:At3g58660
HOGENOM:HOG000091059 InParanoid:Q9LXT5 PhylomeDB:Q9LXT5
ArrayExpress:Q9LXT5 Genevestigator:Q9LXT5 Uniprot:Q9LXT5
Length = 446
Score = 122 (48.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 107 YHAFLASESVIKQIPRLLGPGLNKAGKFPT-LVTHQESLESKVNETKATVKFQLKKVLCM 165
Y F +I +PR++G + K P L + + ++ + + F ++ C
Sbjct: 148 YDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFFIRTGTCS 207
Query: 166 GVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207
+ VG LSM+ +I +NV ++N LV L W VR L+LK
Sbjct: 208 VIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLK 249
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 2 SKLQSDALREAVSSIVQYSKE---TKKRNFTETIELQ---IGLKNYDPQKDKRFSGSVKL 55
S++ + A++ ++ + + T+K E EL + LK PQK + + + L
Sbjct: 22 SRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKI-PQKTRTNAYRIPL 80
Query: 56 PH-IPRPKM---KVCMLGD 70
PH + P + ++C++ D
Sbjct: 81 PHPLINPTVDSPEICLIID 99
>TIGR_CMR|CJE_0525 [details] [associations]
symbol:CJE_0525 "ribosomal protein L1" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 GO:GO:0006412 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:YP_178543.1 ProteinModelPortal:Q5HVZ2
SMR:Q5HVZ2 STRING:Q5HVZ2 GeneID:3231286 KEGG:cjr:CJE0525
PATRIC:20042772 BioCyc:CJEJ195099:GJC0-540-MONOMER Uniprot:Q5HVZ2
Length = 233
Score = 124 (48.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 7 DALRE-AVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMK 64
D+ +E A+S + K K F ET+E+ + L N DP+ D+ GSV LP K++
Sbjct: 16 DSNKEYALSDAIDTIKTLKSAKFDETVEIALKL-NVDPRHADQMVRGSVVLPAGTGKKVR 74
Query: 65 VCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLL 124
V ++ +EA+ G D + G A ++ ++ R+L
Sbjct: 75 VAVIAKDAKADEAKNAGAD---IVGSDDLVEEIQKGNMNFDVLIATPNLMGLVGKVGRIL 131
Query: 125 GP-GLNKAGKFPTLVTHQESLESKVNETKA-TVKFQLKKVLCMGVAVGNLSMEEKQIFQN 182
GP GL K T+ + VN K+ V F++ K + +G +S ++Q++ N
Sbjct: 132 GPKGLMPNPKTGTVTM---DVAQAVNNAKSGQVNFRVDKQGNIHAGLGKVSFSKEQLWDN 188
Query: 183 VQMSVNFLVSLLKKNWQNVRCLYLKS-----TMGPSNRI 216
V F+ ++ K + Y+K+ TM PS ++
Sbjct: 189 VS---TFVKAINKHKPAAAKGRYIKNAALSLTMSPSVKL 224
>TIGR_CMR|GSU_2866 [details] [associations]
symbol:GSU_2866 "ribosomal protein L1" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_953908.1 ProteinModelPortal:Q748Y3
SMR:Q748Y3 GeneID:2686759 KEGG:gsu:GSU2866 PATRIC:22028583
BioCyc:GSUL243231:GH27-2847-MONOMER Uniprot:Q748Y3
Length = 234
Score = 121 (47.7 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 51/201 (25%), Positives = 89/201 (44%)
Query: 17 VQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGDAQHVE 75
++ K F ET+E+ + L DP+ D+ G+V LP+ ++V + + +
Sbjct: 27 IESVKSAAYAKFDETVEVAVRL-GVDPRHADQMVRGAVVLPNGLGKDVRVLVFAKGEKEK 85
Query: 76 EAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGP-GLNKAGKF 134
EA + G DY+ E + V+ +I +LLGP GL K
Sbjct: 86 EAREAGADYVGAEDLVTKIQEGWFEFDTAIATPDMMG---VVGKIGKLLGPRGLMPNPKV 142
Query: 135 PTLVTHQESLESKVNETKA-TVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSL 193
T VT + V E+KA V+F+++K + VG +S + ++ +N+ V L+
Sbjct: 143 GT-VTFD--VGRAVKESKAGKVEFRVEKAGIVHAPVGKVSFDADKLKENLLALVEALLKA 199
Query: 194 LKKNWQN--VRCLYLKSTMGP 212
+ V+ + + STMGP
Sbjct: 200 KPSAAKGTYVKKISISSTMGP 220
>TIGR_CMR|SPO_3513 [details] [associations]
symbol:SPO_3513 "ribosomal protein L1" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006417 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:YP_168708.1 ProteinModelPortal:Q5LMQ0
SMR:Q5LMQ0 GeneID:3194818 KEGG:sil:SPO3513 PATRIC:23380497
Uniprot:Q5LMQ0
Length = 232
Score = 117 (46.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 48/205 (23%), Positives = 86/205 (41%)
Query: 12 AVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMKVCMLGD 70
+V V K F ET+E+ + L DP+ D+ G V LP+ ++V +
Sbjct: 22 SVEQAVALIKSAASAKFDETVEIAMNL-GVDPRHADQMVRGVVGLPNGTGKTVRVAVFAR 80
Query: 71 AQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGP-GLN 129
EEA+ G D + E + V+ ++ ++LGP L
Sbjct: 81 GPKAEEAQAAGADIVGAEDLMETIQSGKIEFDRCIATPDMMP---VVGRLGKILGPRNLM 137
Query: 130 KAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNF 189
K T VT + ++ N V+F+++K + VG +S +E ++ +NV+ V+
Sbjct: 138 PNPKVGT-VT-MDVAQAVQNAKGGEVQFKVEKAGVIHAGVGKVSFDEAKLVENVRAFVDA 195
Query: 190 LVSLLKKNWQN--VRCLYLKSTMGP 212
+ + ++ + L STMGP
Sbjct: 196 VAKAKPAGAKGTYLKKIALSSTMGP 220
>TIGR_CMR|ECH_0955 [details] [associations]
symbol:ECH_0955 "ribosomal protein L1" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 TIGRFAMs:TIGR01169 KO:K02863 OMA:YVTSTMG
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_507743.1
ProteinModelPortal:Q2GFP0 STRING:Q2GFP0 GeneID:3927409
KEGG:ech:ECH_0955 PATRIC:20577292
BioCyc:ECHA205920:GJNR-958-MONOMER Uniprot:Q2GFP0
Length = 220
Score = 111 (44.1 bits), Expect = 0.00013, P = 0.00013
Identities = 54/225 (24%), Positives = 101/225 (44%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
M+ L S+ + + S + + E+ K NF E++++ I L + D++ G V LP
Sbjct: 1 MNSLISNEVYDVESGLRKVI-ESAKANFCESVDVAINLNINSSKSDEQVRGCVVLPKGLG 59
Query: 61 PKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHA--FLASESVIK 118
++KV + ++E A + D + E F+AS +
Sbjct: 60 REIKVAVFAKGGYLEMAREAMADIVGDEELIEEVKKKQCKLDVDWCLTTPDFMAS---VS 116
Query: 119 QIPRLLGP-GLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEK 177
I ++LGP GL KF T VT + + K+ ++ +KF+ K + +GN+ +
Sbjct: 117 SIAKILGPKGLMPNPKFNT-VTFELAKAIKMIKS-GQIKFKSDKTGIVHAKIGNIKFSIE 174
Query: 178 QIFQNVQMSVNFLVSLLKK-NWQNVRCLYLK-----STMGPSNRI 216
+ +N N ++S +K+ +++ LY K STMG S ++
Sbjct: 175 DLLENF----NAVISAVKQCKPASIKGLYFKDVFIISTMGKSVKV 215
>TAIR|locus:2087388 [details] [associations]
symbol:EMB3126 "EMBRYO DEFECTIVE 3126" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005840 "ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0006098 "pentose-phosphate
shunt" evidence=RCA] [GO:0006354 "DNA-dependent transcription,
elongation" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0015979 "photosynthesis"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA] [GO:0034660
"ncRNA metabolic process" evidence=RCA] [GO:0042793 "transcription
from plastid promoter" evidence=RCA] [GO:0045036 "protein targeting
to chloroplast" evidence=RCA] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 Prosite:PS01199 GO:GO:0005634 GO:GO:0009570
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0009941
EMBL:AL163818 GO:GO:0003735 GO:GO:0009535 GO:GO:0019843
GO:GO:0015934 SUPFAM:SSF56808 UniGene:At.24203 UniGene:At.69654
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:X90855 EMBL:BT001191 EMBL:AY133519
EMBL:AY059929 EMBL:AY053410 IPI:IPI00522851 PIR:T49190 PIR:T51934
RefSeq:NP_191908.1 HSSP:Q5SLP7 ProteinModelPortal:Q9LY66 SMR:Q9LY66
STRING:Q9LY66 PaxDb:Q9LY66 PRIDE:Q9LY66 ProMEX:Q9LY66
EnsemblPlants:AT3G63490.1 GeneID:825524 KEGG:ath:AT3G63490
GeneFarm:61 TAIR:At3g63490 HOGENOM:HOG000207015 InParanoid:Q9LY66
OMA:AKGRYVK PhylomeDB:Q9LY66 ProtClustDB:CLSN2914724
Genevestigator:Q9LY66 TIGRFAMs:TIGR01169 Uniprot:Q9LY66
Length = 346
Score = 113 (44.8 bits), Expect = 0.00021, P = 0.00021
Identities = 48/224 (21%), Positives = 97/224 (43%)
Query: 1 MSKLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQ-KDKRFSGSVKLPHIP 59
+ KL+ V++ + K+T F E++E L N DP+ D++ +V LP
Sbjct: 119 IQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRL-NIDPKYNDQQLRATVSLPKGT 177
Query: 60 RPKMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQ 119
+ V +L + V+EA+ G D + + + +AS ++ +
Sbjct: 178 GQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFME------FDKLIASPDMMVK 231
Query: 120 IP---RLLGP-GLNKAGKFPTLVTHQESLESKVNE-TKATVKFQLKKVLCMGVAVGNLSM 174
+ ++LGP GL K T+ + + + E K V+F+ K + + G ++
Sbjct: 232 VAGLGKILGPRGLMPNPKAGTVTAN---IPQAIEEFKKGKVEFRADKTGIVHIPFGKVNF 288
Query: 175 EEKQIFQNVQMSVNFLVSLLKKNWQNV--RCLYLKSTMGPSNRI 216
E+ + N +V + + K + V + ++ S+MGPS ++
Sbjct: 289 TEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKL 332
>TIGR_CMR|DET_0992 [details] [associations]
symbol:DET_0992 "ribosomal protein L1" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_181715.1
ProteinModelPortal:Q3Z7T4 STRING:Q3Z7T4 GeneID:3229744
KEGG:det:DET0992 PATRIC:21609033 BioCyc:DETH243164:GJNF-993-MONOMER
Uniprot:Q3Z7T4
Length = 237
Score = 110 (43.8 bits), Expect = 0.00021, P = 0.00021
Identities = 45/218 (20%), Positives = 91/218 (41%)
Query: 3 KLQSDALREAVSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRP 61
KL +L A + + +K+ F ET+E+ + + DP+ ++ G LPH
Sbjct: 13 KLLDQSLAYAPAEAIDVAKKMAAAKFDETVEMHLKM-GLDPKNATQQLRGVAVLPHGLGK 71
Query: 62 KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIP 121
++V + + + A+ G D V G + +++ ++ ++
Sbjct: 72 TVRVLVFAQGEAEKAAQAAGAD---VYGGDELIKKVEAGFLD---FDVAISTPDMMSKVG 125
Query: 122 RLLGPGLNKAGKFPT----LVTHQESLESKVNET-KATVKFQLKKVLCMGVAVGNLSMEE 176
+L G L + G P V E + + E K V+F+L + + + +G S E
Sbjct: 126 KL-GKVLGRRGLMPNPKSGTVVPAEDFKQVIEEARKGRVEFKLDRSGIVHIILGKASFEG 184
Query: 177 KQIFQNVQMSVNFLVSLLKKN--WQNVRCLYLKSTMGP 212
+ + +N+ V+ ++ Q ++ YL +TMGP
Sbjct: 185 QALLENMTSVVDAIIRSKPTGAKGQYIKSAYLATTMGP 222
>TAIR|locus:2202260 [details] [associations]
symbol:AT1G06380 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR023674
Pfam:PF00687 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006412
GO:GO:0009941 GO:GO:0003723 EMBL:AC068143 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 KO:K14775
IPI:IPI00547803 PIR:F86199 RefSeq:NP_172126.1 UniGene:At.42343
ProteinModelPortal:Q9LMI1 STRING:Q9LMI1 PRIDE:Q9LMI1
EnsemblPlants:AT1G06380.1 GeneID:837149 KEGG:ath:AT1G06380
TAIR:At1g06380 eggNOG:NOG306589 HOGENOM:HOG000264992
InParanoid:Q9LMI1 OMA:ACESALF PhylomeDB:Q9LMI1
ProtClustDB:CLSN2914142 Genevestigator:Q9LMI1 Uniprot:Q9LMI1
Length = 254
Score = 109 (43.4 bits), Expect = 0.00034, P = 0.00034
Identities = 42/190 (22%), Positives = 80/190 (42%)
Query: 32 IELQIGLKNYDPQKDKRFSGSVKLPH-----IPRPKMKVCMLGDAQH----VEEA--EKI 80
+ L + LK PQ D+ + LPH + ++C++ D +H +EA +KI
Sbjct: 52 VYLIVTLKRI-PQLDRTNPLMIPLPHPLIDLVAEDPPELCLIIDDKHKNKITKEAALKKI 110
Query: 81 GLDYMDVEGXXXXXXXXXXXXXXXXX--YHAFLASESVIKQIPRLLGPGLNKAGKFPTLV 138
+ + + + + A ++ +P+LLG K K P +
Sbjct: 111 EAEKIPITTVIKVSKLKSDLRKLEEEKRFELYFAERRLMPMLPKLLGKEFVKKNKTPIAI 170
Query: 139 THQE-SLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKN 197
+ S + ++ + + F + C V V LSM +I +NV ++N + L+
Sbjct: 171 NLRHGSWKEQIEKACESALFFVGTGTCSVVKVAKLSMGRNEIAENVVAAMNGIGDLVPGR 230
Query: 198 WQNVRCLYLK 207
W+NV+ +LK
Sbjct: 231 WKNVKLFHLK 240
>TIGR_CMR|APH_1027 [details] [associations]
symbol:APH_1027 "ribosomal protein L1" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 TIGRFAMs:TIGR01169 RefSeq:YP_505586.1
ProteinModelPortal:Q2GJ65 STRING:Q2GJ65 GeneID:3931039
KEGG:aph:APH_1027 PATRIC:20950804 KO:K02863 OMA:YVTSTMG
ProtClustDB:PRK05424 BioCyc:APHA212042:GHPM-1034-MONOMER
HAMAP:MF_01318_B Uniprot:Q2GJ65
Length = 216
Score = 107 (42.7 bits), Expect = 0.00038, P = 0.00038
Identities = 51/206 (24%), Positives = 89/206 (43%)
Query: 16 IVQYSKETKKRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKVCMLGDAQHVE 75
I Q K T R F E++++ I L D + G LP +++V +L ++ +
Sbjct: 14 IDQLLKSTTAR-FKESVDVAIKLSTGDSRSGDSIRGVAVLPKGLGREVRVAVLAKGEYAK 72
Query: 76 EAEKIGLDYM-DVEGXXXXXXXXXXXXXXXXXYHAFLASESVIKQIPRLLGP-GLNKAGK 133
+A+ G D + D + F++ S I +I LGP GL K
Sbjct: 73 QAKDAGADVVGDSDLIEEIKKGRKLDFDWCIATPDFMSQVSAIAKI---LGPRGLMPNPK 129
Query: 134 FPTLVTHQESLESKVNETKA-TVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVS 192
F T VT + V K+ V+F+ K + V +G++ + + +N++ V+ +
Sbjct: 130 FGT-VTFD--IAKMVGIVKSGQVRFRSDKYGIVHVKIGDVGFSREDLMENLRAVVSAVQG 186
Query: 193 LLKKNWQNV--RCLYLKSTMGPSNRI 216
L + + ++L STMG S RI
Sbjct: 187 LKPATVKGAFFKAVFLNSTMGKSFRI 212
>TIGR_CMR|CPS_4772 [details] [associations]
symbol:CPS_4772 "ribosomal protein L1" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 GO:GO:0006412
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0000049
GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOGENOM:HOG000207015 OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863
ProtClustDB:PRK05424 HAMAP:MF_01318_B RefSeq:YP_271416.1
ProteinModelPortal:Q47UV6 SMR:Q47UV6 STRING:Q47UV6 GeneID:3518789
KEGG:cps:CPS_4772 PATRIC:21472361
BioCyc:CPSY167879:GI48-4778-MONOMER Uniprot:Q47UV6
Length = 232
Score = 106 (42.4 bits), Expect = 0.00064, P = 0.00064
Identities = 48/207 (23%), Positives = 90/207 (43%)
Query: 7 DALREA-VSSIVQYSKETKKRNFTETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPKMK 64
D +E ++ V KE NF E++++ + L D +K D+ G+ LP+ +++
Sbjct: 16 DVTKEYDINEAVSLLKEFATANFRESVDVAVNL-GIDARKSDQNVRGATVLPNGTGREVR 74
Query: 65 VCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXYHAFLASES---VIKQIP 121
V + ++ E+A+ G D + +E + +AS V+ Q+
Sbjct: 75 VAVFTQGENAEKAKAAGADIVGMEDLAAQVKAGEMN------FDVVIASPDAMRVVGQLG 128
Query: 122 RLLGP-GLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180
++LGP GL K T VT + K N ++++ K + +G E Q+
Sbjct: 129 QILGPRGLMPNPKVGT-VTPDVAGAVK-NAKSGQIRYRNDKNGIIHTTIGKADFEPAQLQ 186
Query: 181 QNVQMSVNFLVSLLKKNWQNVRCLYLK 207
+N++ + L +L K N + YLK
Sbjct: 187 ENLE---SLLEALKKAKPANAKGQYLK 210
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 217 200 0.00087 111 3 11 22 0.49 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 590 (63 KB)
Total size of DFA: 153 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.49u 0.10s 17.59t Elapsed: 00:00:01
Total cpu time: 17.50u 0.10s 17.60t Elapsed: 00:00:01
Start: Tue May 21 00:55:01 2013 End: Tue May 21 00:55:02 2013