BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027856
(217 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust.
Identities = 209/216 (96%), Positives = 212/216 (98%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M +YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MASYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVSTEDA AFAEREN FFMETSALESMNVENAFTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KAL+IGDDPAALPKGQTINVGTKDDVSAVKKVGCCS
Sbjct: 181 KALDIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/217 (95%), Positives = 212/217 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFEN+ERWLKELRDHTDSNIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM VGNKADLRHLRAVSTEDA AFAERENTFFMETSALESMNVENAFTEVL+QIYRVVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KAL+IGDDPAALPKGQTINVG+KDDVSAVKKVGCCSN
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/217 (95%), Positives = 212/217 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM VGNKADLRHLRAVSTEDA AFAERENTFFMETSALESMNVENAFTEVL+QIYRVVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KAL+IGDDPAALPKGQTINVG+KDDVSAVKKVGCCSN
Sbjct: 181 KALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN 217
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/216 (94%), Positives = 213/216 (98%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNKADLRHLRAVSTED+TAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KALEIGDDP ALPKGQTI+VG++DDVSAVKK GCCS
Sbjct: 181 KALEIGDDPTALPKGQTIDVGSRDDVSAVKKSGCCS 216
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/217 (94%), Positives = 214/217 (98%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDY FKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADDDYDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNKADLRHLRAVSTED+TAFAERENTFFMETSALES+NVENAFTEVLTQIYRVVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KALEIGDDPAALPKGQTINVG++DDVSAVKK GCCS+
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCSS 217
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/217 (94%), Positives = 211/217 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYR DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MAAYRTDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVSTEDA AFAE+ENTFFMETSALES+NVENAFTEVLTQIYRVV R
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KALEIG+DPAALPKGQTINVG KDDVSA+KKVGCCS+
Sbjct: 181 KALEIGEDPAALPKGQTINVGNKDDVSAMKKVGCCSS 217
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/216 (94%), Positives = 211/216 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNKADLRHLRAVSTEDA FAERENTFFMETSALES+NVENAFTEVLTQIY VVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KALEIGDDPAALPKGQTINVG++DDVSAVKK GCCS
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCS 216
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/216 (94%), Positives = 212/216 (98%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVST+DA AFAERENTFFMETSALES+NV+N+FTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K LEIGDDPAALPKGQTINVG++DDVSAVKKVGCCS
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSRDDVSAVKKVGCCS 216
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 202/217 (93%), Positives = 213/217 (98%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRA++ EDATAFA+R+NTFFMETSALESMNVENAFTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KAL+IGDDPAALP+GQTINVG++DDVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAALPRGQTINVGSRDDVSAVKKAGCCSS 217
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/216 (93%), Positives = 214/216 (99%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNKADLRHLRAVSTED+T+FAERE+TFFMETSALES+NVE+AFTEVLTQIYRVVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KALEIGDDPAALPKGQTINVG++DDVSAVKK GCCS
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKGGCCS 216
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/216 (94%), Positives = 211/216 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVST+DA AFAERENTFFMETSALES+NV+NAFTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K LEIGDDPAALPKGQTINVG++DDVSAVKK GCCS
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCS 216
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/216 (93%), Positives = 213/216 (98%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNKADLRHLRAVSTEDAT+F+ERENT+FMETSALES+NVE+AFTEVLTQIYRVVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KALEIGDDPAALPKGQTINVG++DDVSAVKK GCCS
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKAGCCS 216
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/216 (95%), Positives = 212/216 (98%), Gaps = 1/216 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAV+TEDA AFAERE+TFFMETSALES+NVENAFTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KAL++GDDPAALPKGQTINVG KDDVSAVKKVGCCS
Sbjct: 181 KALDVGDDPAALPKGQTINVG-KDDVSAVKKVGCCS 215
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/217 (94%), Positives = 210/217 (96%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS+IV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK DLRHL AVS +DA AFAERENTFFMETSALESMNVENAFTEVLTQIY+VVSR
Sbjct: 121 IMLVGNKGDLRHLXAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KAL+IGDDPAALPKGQTINVGTKDDVSAVKK GCCS+
Sbjct: 181 KALDIGDDPAALPKGQTINVGTKDDVSAVKKAGCCSS 217
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/216 (93%), Positives = 211/216 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE+WLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVST+DA AFAERENTFFMETSALES+NV+NAFTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K LEIGDDPAALPKGQTINVG++DDVSAVKK GCCS
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCS 216
>gi|359493623|ref|XP_002282900.2| PREDICTED: uncharacterized protein LOC100265827 [Vitis vinifera]
Length = 715
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/217 (94%), Positives = 211/217 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK
Sbjct: 499 MAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 558
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS+IV
Sbjct: 559 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 618
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK DLRHLRAVS +DA AFAERENTFFMETSALESMNVENAFTEVLTQIY+VVSR
Sbjct: 619 IMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 678
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KAL+IGDDPAALPKGQTINVGTKDDVSAVKK GCCS+
Sbjct: 679 KALDIGDDPAALPKGQTINVGTKDDVSAVKKAGCCSS 715
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/216 (94%), Positives = 212/216 (98%), Gaps = 1/216 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAV+TEDATAFAERENTFFMETSALES+NVENAFTEVLTQI+RVVSR
Sbjct: 121 IMLVGNKADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KAL++GDDPAALPKGQTI VG KDDVSAVKKVGCCS
Sbjct: 181 KALDVGDDPAALPKGQTITVG-KDDVSAVKKVGCCS 215
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/216 (93%), Positives = 210/216 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAV+T DA AFAERENTFFMETSALES+NV+NAFTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVATNDAKAFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K LEIGDDPAALPKGQTINVG++DDVSAVKK GCCS
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSRDDVSAVKKSGCCS 216
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/216 (93%), Positives = 210/216 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVST+DA FAERENTFFMETSALES+NV+NAFTEVLTQIYRVVS+
Sbjct: 121 IMLVGNKADLRHLRAVSTDDAKGFAERENTFFMETSALESLNVDNAFTEVLTQIYRVVSK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K LEIGDDPAALPKGQTINVG+KDDVSAVKKVGC S
Sbjct: 181 KTLEIGDDPAALPKGQTINVGSKDDVSAVKKVGCYS 216
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/216 (95%), Positives = 209/216 (96%), Gaps = 2/216 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MAAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR HTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVSTEDA AFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KALE+GDDP ALPKGQTINV KDDVSAVKKVGCCS
Sbjct: 181 KALEVGDDPGALPKGQTINV--KDDVSAVKKVGCCS 214
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/216 (94%), Positives = 211/216 (97%), Gaps = 1/216 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSI DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT+SNIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAV+TEDATAFAERE TFFMETSALES+NVENAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLRHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KAL++GDDPAALPKGQTINVG KDDVSAVKKVGCCS
Sbjct: 181 KALDVGDDPAALPKGQTINVG-KDDVSAVKKVGCCS 215
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/216 (92%), Positives = 212/216 (98%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRAD+DYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR D+K
Sbjct: 1 MGAYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFEN+ERWLKELRDHTD+NIV
Sbjct: 61 VLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNKADLRHLRAVSTE+ATAFAERE TFFMETSALESMNVENAFTEVLTQIY VVS+
Sbjct: 121 VMLVGNKADLRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KALEIGDDPAALPKGQTINVG++DDVSAVKK GCCS
Sbjct: 181 KALEIGDDPAALPKGQTINVGSRDDVSAVKKDGCCS 216
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/217 (92%), Positives = 209/217 (96%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAV+TEDA FAERE+TFFMETSALESMNVENAFTEVLTQIYRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KAL++GDD LPKGQTINVG++DDVSAVKK GCCS+
Sbjct: 181 KALDVGDDSTYLPKGQTINVGSRDDVSAVKKAGCCSS 217
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/215 (92%), Positives = 209/215 (97%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVS EDA AFAERE+TFFMETSALE+MNVENAFTEVLTQIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTINVG KDDVSAVKK GCCS+
Sbjct: 182 LDIGDDPAAPPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|297830058|ref|XP_002882911.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
gi|297328751|gb|EFH59170.1| hypothetical protein ARALYDRAFT_478935 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/217 (90%), Positives = 210/217 (96%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI D+K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT++NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVSTEDA AFAERENTFFMETSALE++NVENAFTEVL+QIYRV S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KAL+IGDDPA LPKGQ+INVG+KDDVS VKKVGCCS+
Sbjct: 181 KALDIGDDPATLPKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/215 (92%), Positives = 208/215 (96%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK+V
Sbjct: 109 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 168
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHTD+NIVIM
Sbjct: 169 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 228
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVS EDA FAERE+TFFMETSALESMNVE+AFTEVLTQIYRVVS+KA
Sbjct: 229 LVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 288
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTINVG KDDVSAVKK GCCS+
Sbjct: 289 LDIGDDPAAPPRGQTINVGGKDDVSAVKKSGCCSS 323
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/215 (92%), Positives = 209/215 (97%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRADDDYDYLFKVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSIR DDK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKEL+DHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVS EDA AFAERE TFFMETSALESMNVE+AFTEVLTQIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTINVG+KDDVSAVKK GCCS+
Sbjct: 182 LDIGDDPAAPPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/216 (93%), Positives = 209/216 (96%), Gaps = 2/216 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRAD+DYDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSIR DDK
Sbjct: 1 MSAYRADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM VGNKADLRHLRAVSTEDA AFAERENT+FMETSALES+NVENAFTEVLTQIY VVSR
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KAL+IGDDPAALPKG+TINV KDDVSAVKKVGCCS
Sbjct: 181 KALDIGDDPAALPKGETINV--KDDVSAVKKVGCCS 214
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/215 (92%), Positives = 209/215 (97%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVS EDA AFAERE+TFFMETSALE+MNVE+AFTEVLTQIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTINVG KDDVSAVKK GCCS+
Sbjct: 182 LDIGDDPAAPPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|3024504|sp|Q40521.1|RB11B_TOBAC RecName: Full=Ras-related protein Rab11B
gi|623578|gb|AAA74113.1| putative [Nicotiana tabacum]
Length = 217
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/216 (92%), Positives = 210/216 (97%), Gaps = 1/216 (0%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G YRA+DDYDYLFK+VLIGDSGVGKSNLLSRF+RNEF+LESKSTIGVEFATRSIR DDKI
Sbjct: 3 GGYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKI 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+TRHVTFENVERWLKELRDHTD NIVI
Sbjct: 63 VKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVI 122
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
MLVGNKADLRHLRAVSTEDA AFAERENTFFMETSALES+NVENAFTEVLT+IY+VV RK
Sbjct: 123 MLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRK 182
Query: 182 ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
ALE+GDDPAALPKGQTINVG KDDVSAVKKVGCCS+
Sbjct: 183 ALEVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/215 (91%), Positives = 209/215 (97%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRADDDYDYLFKVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSIR DDK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKEL+DHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVS EDA AFAERE TFFMETSALE+MNVE+AFTEVLTQIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTINVG+KDDVSAVKK GCCS+
Sbjct: 182 LDIGDDPAAPPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/215 (92%), Positives = 208/215 (96%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVS EDA FAERE+TFFMETSALESMNVE+AFTEVLTQIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTINVG KDDVSAVKK GCCS+
Sbjct: 182 LDIGDDPAAPPRGQTINVGGKDDVSAVKKSGCCSS 216
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/215 (91%), Positives = 207/215 (96%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++EL+DHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVSTEDA AFAE+ENTFFMETSALESMNVENAFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA PKGQTINVG KDDVSAVKK CCS+
Sbjct: 182 LDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 216
>gi|449468390|ref|XP_004151904.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449529820|ref|XP_004171896.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
Length = 217
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/217 (90%), Positives = 206/217 (94%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELR HTD NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRSHTDHNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVSTEDA AFAERE T+FMETSALES NVEN+FTEVLTQ YRVVSR
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAQAFAERERTYFMETSALESFNVENSFTEVLTQTYRVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
K L+IGDDP LPKGQTI++G+KDDVSAVKK GCCS+
Sbjct: 181 KILDIGDDPTVLPKGQTIDIGSKDDVSAVKKAGCCSS 217
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/215 (92%), Positives = 207/215 (96%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVS EDA FAERE TFFMETSALESMNVE+AFTEVLTQIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTINVG KDDVSAVKK GCCS+
Sbjct: 182 LDIGDDPAAPPRGQTINVGGKDDVSAVKKAGCCSS 216
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/217 (89%), Positives = 208/217 (95%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI D+K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT++NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAVSTEDA AFAERENTFFMETSALE++NVENAFTEVL+QIYRV S+
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KAL+IGDD LPKGQ+INVG+KDDVS VKKVGCCS+
Sbjct: 181 KALDIGDDHTTLPKGQSINVGSKDDVSEVKKVGCCSS 217
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/215 (90%), Positives = 206/215 (95%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++EL+DHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAV TEDA AFAEREN FFMETSALE+MNVE+AFTEVLTQIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA PKGQTINVG KDDVSAVKK CCS+
Sbjct: 182 LDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 216
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/213 (92%), Positives = 206/213 (96%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
RA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK+VKA
Sbjct: 28 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKA 87
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHTD+NIVIMLV
Sbjct: 88 QIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLV 147
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNKADLRHLRAVS EDA FAERE+TFFMETSALESMNVE+AFTEVLTQIYRVVS+KAL+
Sbjct: 148 GNKADLRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALD 207
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
IGDDPAA P+GQTINVG KDDVSAVKK GCCS+
Sbjct: 208 IGDDPAAPPRGQTINVGGKDDVSAVKKSGCCSS 240
>gi|357147666|ref|XP_003574433.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/215 (90%), Positives = 207/215 (96%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRADDDYDYLFKVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSIR DDK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKEL+DHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAV EDA AFAERE T+F ETSALE+MNVE+AFTEVLTQIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVPVEDAKAFAEREYTYFTETSALEAMNVEDAFTEVLTQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTINVG+KDDVSAVKK GCCS+
Sbjct: 182 LDIGDDPAAPPRGQTINVGSKDDVSAVKKAGCCSS 216
>gi|1370156|emb|CAA98184.1| RAB11H [Lotus japonicus]
Length = 218
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/218 (89%), Positives = 208/218 (95%), Gaps = 1/218 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQ+WDTAGQERYRAITSAYYRGAVGALLVYDV+RHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 VVKAQVWDTAGQERYRAITSAYYRGAVGALLVYDVSRHVTFENVERWLKELRDHTDTNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENT-FFMETSALESMNVENAFTEVLTQIYRVVS 179
+MLVGNKADLRHLRAVSTED++ F E T FFMETSALES+NVENAFTEVLTQIYRVVS
Sbjct: 121 VMLVGNKADLRHLRAVSTEDSSGFLLNERTHFFMETSALESLNVENAFTEVLTQIYRVVS 180
Query: 180 RKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+KALEIGDDP ALPKGQTINVG++DDVS VKK GCCS+
Sbjct: 181 KKALEIGDDPTALPKGQTINVGSRDDVSPVKKSGCCSS 218
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/206 (94%), Positives = 204/206 (99%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR DDK+VKAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV+MLVGNKADL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
RHLRAVSTED+TAFAERENTFFMETSALES+NVE+AFTEVLTQIYRVVS+KALEIGDDPA
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPA 180
Query: 191 ALPKGQTINVGTKDDVSAVKKVGCCS 216
ALPKGQTINVG++DDVSAVKK GCCS
Sbjct: 181 ALPKGQTINVGSRDDVSAVKKGGCCS 206
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/217 (88%), Positives = 209/217 (96%), Gaps = 1/217 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+CDDK
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRA+STE+A AFAERENTFFMETSALE++NV+NAFTEVLTQIYRVVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 181 KALEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCS 216
KALE GDDP ALPKGQ INVG++DD+SAVKK GCCS
Sbjct: 181 KALEAGDDPTTALPKGQMINVGSRDDISAVKKPGCCS 217
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/215 (89%), Positives = 207/215 (96%), Gaps = 1/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK++
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAVS ED AFAERENT+FMETSALES NVENAFTEVL+QIYR+VS+KA
Sbjct: 122 LVGNKADLRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
L++G+DPAA+P KGQTI+VG KDDV+A+KKVGCCS
Sbjct: 182 LDVGEDPAAVPSKGQTIHVGNKDDVTAMKKVGCCS 216
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/215 (88%), Positives = 208/215 (96%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRA+DDYDYLFKVVLIGDSGVGKSNLL+RFTRNEFSLESKSTIGVEFATRSI DDK+V
Sbjct: 2 AYRAEDDYDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWL+EL+DHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAV +EDA AFAERENTFFMETSALE+MNVE+AFTEVL+QIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA PKG+TI+VG+KDDVSAVKK CCS+
Sbjct: 182 LDIGDDPAAPPKGKTISVGSKDDVSAVKKSACCSS 216
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/215 (89%), Positives = 204/215 (94%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI DDK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++ELRDHTD+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAV TEDA AFAEREN FFMETSALE+MNVE AFTEVLTQIY VVS+KA
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+GQTI+VG KDDVSAVKK CCS+
Sbjct: 182 LDIGDDPAAPPRGQTISVGGKDDVSAVKKSACCSS 216
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/217 (88%), Positives = 208/217 (95%), Gaps = 1/217 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+CDDK
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRA+STE+A AFAERENTFFMETSALE++NV+NAFTEVLTQIYRVVS+
Sbjct: 121 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 180
Query: 181 KALEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCS 216
KALE GDDP ALPKGQ INVG +DD+SAVKK GCCS
Sbjct: 181 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCS 217
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/215 (88%), Positives = 204/215 (94%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI +DK+V
Sbjct: 2 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++ELRDHTD+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAV TEDA AFAER+N FFMETSALE+MNVE+AFTEVL QIYRVVS+KA
Sbjct: 122 LVGNKADLRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L+IGDDPAA P+G TINVG KDDVSAVKK CCS+
Sbjct: 182 LDIGDDPAAPPRGHTINVGGKDDVSAVKKSACCSS 216
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/216 (88%), Positives = 205/216 (94%), Gaps = 1/216 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR D+K
Sbjct: 1 MGAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENV+RWLKELRDHTDS+IV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADL HLRAVSTEDA A+AE+E+TFF+ETSALES NVENAFTEVLTQIY VVSR
Sbjct: 121 IMLVGNKADLGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KALE GD+ A +PKGQTINVG KDDVSA+K GCCS
Sbjct: 181 KALETGDEAATVPKGQTINVG-KDDVSAIKIGGCCS 215
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/217 (86%), Positives = 203/217 (93%), Gaps = 1/217 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATRSI+ DDK
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADL HLRA+STE+ FAERENTFFMETSALE++NVENAFTEVLTQIYRVVS+
Sbjct: 121 IMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSK 180
Query: 181 KALEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCS 216
KAL+ GDDP ALPKGQ INVG++DDVSAVKK GCC+
Sbjct: 181 KALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCA 217
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 180/216 (83%), Positives = 201/216 (93%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFS+ESKSTIGVEFATRS+ D+K
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
I+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+TRH+TFENVERWLKELRDHTD+N+V
Sbjct: 61 IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRAV TE+A +F+EREN FFMETSAL++ NVE AFT VLTQIYRV+SR
Sbjct: 121 IMLVGNKADLRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
KAL+ DP +LPKGQTI++G KDDV+AVK GCCS
Sbjct: 181 KALDGTGDPMSLPKGQTIDIGNKDDVTAVKSSGCCS 216
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/215 (85%), Positives = 201/215 (93%), Gaps = 1/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYR+D+DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K+V
Sbjct: 2 AYRSDEDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TR VT+ENVERWLKEL+DHTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLRAVSTED AF+ERE +FMETSALES NVENAF ++LTQIYRVVS+KA
Sbjct: 122 LVGNKSDLRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
L++G+DP+A P KGQTINVG KDDV+A KKVGCCS
Sbjct: 182 LDVGEDPSAAPAKGQTINVGGKDDVTATKKVGCCS 216
>gi|10764861|gb|AAF24551.2|AC007508_14 F1K23.21 [Arabidopsis thaliana]
Length = 212
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/217 (86%), Positives = 202/217 (93%), Gaps = 7/217 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S++TIGVEFATRSI+CDDK
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQE SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 IVKAQIWDTAGQE------SAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 114
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADLRHLRA+STE+A AFAERENTFFMETSALE++NV+NAFTEVLTQIYRVVS+
Sbjct: 115 IMLVGNKADLRHLRAISTEEAKAFAERENTFFMETSALEAVNVDNAFTEVLTQIYRVVSK 174
Query: 181 KALEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCS 216
KALE GDDP ALPKGQ INVG +DD+SAVKK GCCS
Sbjct: 175 KALEAGDDPTTALPKGQMINVGGRDDISAVKKPGCCS 211
>gi|1707014|gb|AAC69136.1| putative GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/218 (85%), Positives = 202/218 (92%), Gaps = 2/218 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATR-SIRCDD 59
MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+FS +S+STIGVEFATR I+ DD
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDD 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N
Sbjct: 61 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANT 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
VIMLVGNKADL HLRA+STE+ FAERENTFFMETSALE++NVENAFTEVLTQIYRVVS
Sbjct: 121 VIMLVGNKADLNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVS 180
Query: 180 RKALEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCS 216
+KAL+ GDDP ALPKGQ INVG++DDVSAVKK GCC+
Sbjct: 181 KKALDAGDDPTTALPKGQMINVGSRDDVSAVKKSGCCA 218
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 201/215 (93%), Gaps = 1/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K++
Sbjct: 2 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+DHTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+ LRHLRAVS +D +F+E+E FFMETSALES NVENAF ++LTQIYRVVS+KA
Sbjct: 122 LVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
L++G+DP+A+P KGQTI+VG KDDV+A KKVGCCS
Sbjct: 182 LDVGEDPSAVPGKGQTISVGNKDDVTATKKVGCCS 216
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/215 (83%), Positives = 200/215 (93%), Gaps = 1/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYR+DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K++
Sbjct: 2 AYRSDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKEL+DHTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+ LRHLRAVS +D +F+E+E FFMETSALES NVENAF ++ TQIYRVVS+KA
Sbjct: 122 LVGNKSVLRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
L++G+DP+A+P KGQTI+VG KDDV+A KKVGCCS
Sbjct: 182 LDVGEDPSAVPGKGQTISVGNKDDVTATKKVGCCS 216
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 180/211 (85%), Positives = 197/211 (93%), Gaps = 3/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+D+DYDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+R DK VKAQ
Sbjct: 4 SDEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGAL+VYDVTR VTFENV+RWLKELRDHTD+NIVIMLVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDANIVIMLVG 123
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NKADLRHLRAV TE+ATAFAERENT+FMETSALES+NV+NAF EVL++IY VVSRK LE
Sbjct: 124 NKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVLSEIYNVVSRKTLEK 183
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
G+DP ALP+GQTIN+G DVSAVKK GCCS
Sbjct: 184 GNDPGALPQGQTINLG---DVSAVKKPGCCS 211
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/214 (83%), Positives = 201/214 (93%), Gaps = 2/214 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYR++DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K++
Sbjct: 2 AYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR VTFENVERWLKEL+DHTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLR VSTED A++E+E +FMETSALES+NVEN+F ++LTQIYRVVS+KA
Sbjct: 122 LVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCC 215
L++G+DP+A+P KGQTINV +KDDV+A KKVGCC
Sbjct: 182 LDVGEDPSAVPGKGQTINV-SKDDVTATKKVGCC 214
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 197/215 (91%), Gaps = 3/215 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K++
Sbjct: 2 AYKVDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TRHVTFENVERWLKELRDHT+ NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLRAVSTEDA FAERE +F+ETSALES NVENAF +VLTQIYR+VS+KA
Sbjct: 122 LVGNKSDLRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKA 181
Query: 183 LEIGDD-PAALPKGQTINVGTKDDVSAVKKVGCCS 216
L++ +D AA P+GQTINV KDDV+A KKVGCCS
Sbjct: 182 LDVSEDNAAAPPQGQTINV--KDDVTATKKVGCCS 214
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 177/214 (82%), Positives = 200/214 (93%), Gaps = 2/214 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYR++DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K++
Sbjct: 2 AYRSEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENVERWLKEL+DHTDSNIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLR VSTED A++E+E +FMETSALES+NVEN+F ++LTQIYRVVS+KA
Sbjct: 122 LVGNKSDLRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCC 215
L++G+DP+A+P KGQTINV +KDDV+A KKVGCC
Sbjct: 182 LDVGEDPSAVPGKGQTINV-SKDDVTATKKVGCC 214
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 365 bits (936), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 179/215 (83%), Positives = 199/215 (92%), Gaps = 4/215 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
AD+DYDYLFK+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRS+ D K+VKAQ
Sbjct: 3 ADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHT++ +V+MLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE- 184
NKADLRHLRAVSTE+AT FAE+E+ +FMETSALES+NV+NAF EVLTQIY VVSRK LE
Sbjct: 123 NKADLRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLET 182
Query: 185 IGDDPA--ALPKGQTINVGTK-DDVSAVKKVGCCS 216
+ DDP+ ALPKG+TI +GTK DDVSAVKK GCCS
Sbjct: 183 VDDDPSTKALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/216 (81%), Positives = 196/216 (90%), Gaps = 3/216 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++ D K+V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELRDHTD NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHL AV T++ AFAERE+ +FMETSALES NVENAF EVLTQIYR+VS++A
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRA 183
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E G+D A+ P KG+ IN+ KDDVSAVKK GCCS+
Sbjct: 184 VEAGEDAASGPGKGEKINI--KDDVSAVKKGGCCSS 217
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/220 (80%), Positives = 198/220 (90%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AVSTED +FAERE+ +FMETSALE+ NV+NAF EVLTQIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E GDD A A+P KG+ I+VG DVSA+K+VGCCSN
Sbjct: 181 KAMEAGDDGAASAVPSKGEKIDVGK--DVSAMKRVGCCSN 218
>gi|356549876|ref|XP_003543316.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 218
Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 179/215 (83%), Positives = 197/215 (91%), Gaps = 4/215 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
AD+DYDYLFK+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATRS+ D K+VKAQ
Sbjct: 3 ADEDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHT++ +V+MLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALIVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE- 184
NKADLRHLRAVSTE+AT +AE+EN +FMETSALES+NV NAF EVLTQIY VVSRK LE
Sbjct: 123 NKADLRHLRAVSTEEATEYAEKENIYFMETSALESLNVGNAFVEVLTQIYNVVSRKTLET 182
Query: 185 IGDDP--AALPKGQTINVGTK-DDVSAVKKVGCCS 216
+ DDP ALPKG+TI +GTK DDVSAVKK GCCS
Sbjct: 183 MDDDPNSKALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 363 bits (931), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/218 (80%), Positives = 194/218 (88%), Gaps = 5/218 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ ++K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TEDA +FAE E+ +FMETSALES NVENAF+EVLTQIY VVS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 181 KALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E G+D +P KG+ I+V DVSAVKK GCCSN
Sbjct: 181 KAMEAGEDSGNVPSKGEKIDV----DVSAVKKTGCCSN 214
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 176/218 (80%), Positives = 193/218 (88%), Gaps = 5/218 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ ++K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TEDA +FAE E+ +FMETSALES NVENAF+EVLTQIY VVS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180
Query: 181 KALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E G D +P KG+ I+V DVSAVKK GCCSN
Sbjct: 181 KAMEAGQDSGNVPSKGEKIDV----DVSAVKKTGCCSN 214
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 176/216 (81%), Positives = 194/216 (89%), Gaps = 3/216 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++ D K+V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELRDHTD NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHL AV T++ AFAERE+ +FMETSALES NVENAF EVLTQIYR+VS+++
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRS 183
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E GDD + P KG+ IN+ KDDVSAVKK GCCS
Sbjct: 184 VEAGDDAGSGPGKGEKINI--KDDVSAVKKGGCCSG 217
>gi|358343344|ref|XP_003635764.1| Ras-related protein Rab11B [Medicago truncatula]
gi|355501699|gb|AES82902.1| Ras-related protein Rab11B [Medicago truncatula]
gi|388505920|gb|AFK41026.1| unknown [Medicago truncatula]
Length = 215
Score = 361 bits (927), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 176/216 (81%), Positives = 197/216 (91%), Gaps = 3/216 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA D++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+R DK
Sbjct: 1 MGA--VDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD TRHVTFENVERWLKELRDHTD+ +V
Sbjct: 59 LVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNKADL+HL+AVSTE+AT FAE+EN +FMETSALES+NV+NAF EVLTQIY VVS+
Sbjct: 119 IMLVGNKADLKHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSK 178
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K LE + A++PKG+TIN+G KDDVS VKK GCCS
Sbjct: 179 KTLEKENGSASVPKGETINIG-KDDVSDVKKSGCCS 213
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 195/216 (90%), Gaps = 3/216 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++ D K+V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELRDHTD NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHL AV T++ AFAERE+ +FMETSALES NVENAF EVL QIYR+VS++A
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRA 183
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E G+D A+ P +G+ IN+ KDDVSAVKK GCCS+
Sbjct: 184 VEAGEDAASGPGRGEKINI--KDDVSAVKKGGCCSS 217
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 195/216 (90%), Gaps = 3/216 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++ D K+V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFEN ERWLKELRDHTD NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVM 123
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHL AV T++ AFAERE+ +FMETSALES NVE+AF EVLTQIYR+VS++A
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRA 183
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E G+D A+ P KG+ IN+ KDDVSAVKK GCCS+
Sbjct: 184 VEAGEDSASGPGKGEKINM--KDDVSAVKKGGCCSS 217
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/215 (81%), Positives = 193/215 (89%), Gaps = 3/215 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
YR +DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++ D K+V
Sbjct: 4 GYREEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELRDHTD NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHL AV T++ AFAERE+ +FMETSALES NVENAF EVLTQIYR+VS+++
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRS 183
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
+E GDD + P KG+ IN+ KDDVSAVKK GCCS
Sbjct: 184 VEAGDDAGSGPGKGEKINI--KDDVSAVKKGGCCS 216
>gi|357135860|ref|XP_003569526.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 219
Score = 358 bits (920), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 171/215 (79%), Positives = 194/215 (90%), Gaps = 1/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AYRA+++YDYLFKVVLIGDSGVGKSNLLSRF R+EFSL+++STIGVEFAT++++ D K+V
Sbjct: 4 AYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLDTRSTIGVEFATKTVQVDGKLV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH+TFEN ERWL ELRDHTD+NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHITFENAERWLAELRDHTDANIVVM 123
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAV E+A AFAER TF METSALES NVE AFTEVL +IYRVVS+KA
Sbjct: 124 LVGNKADLRHLRAVPPEEARAFAERHRTFSMETSALESTNVEGAFTEVLGEIYRVVSKKA 183
Query: 183 LEIGDDPAALPKGQTINVG-TKDDVSAVKKVGCCS 216
L+IGDDPAA P+G+TINVG KD+VS V GCCS
Sbjct: 184 LDIGDDPAAPPRGKTINVGAAKDEVSPVNTGGCCS 218
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 358 bits (919), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 174/220 (79%), Positives = 193/220 (87%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED +FAE+E+ +FMETSALE+ NVEN+F EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180
Query: 181 KALEIGDDPAAL---PKGQTINVGTKDDVSAVKKVGCCSN 217
KA+E GD AA PKG+ I+V DVSAVKK GCCS+
Sbjct: 181 KAMEAGDGTAAASVPPKGEKIDV--SKDVSAVKKAGCCSS 218
>gi|303740|dbj|BAA02111.1| GTP-binding protein [Pisum sativum]
Length = 215
Score = 358 bits (919), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 176/216 (81%), Positives = 197/216 (91%), Gaps = 3/216 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA AD++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+R DK
Sbjct: 1 MGA--ADEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD TRHVTFENVERWLKELRDHTD+ +V
Sbjct: 59 LVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK DLRHL AVSTE+ATAFAE+EN +FMETSALESMNV++AF EVLTQIY VVS+
Sbjct: 119 IMLVGNKTDLRHLCAVSTEEATAFAEKENIYFMETSALESMNVDSAFVEVLTQIYNVVSK 178
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+ALE + A++PKG+TIN+G +DDVS VKK CCS
Sbjct: 179 RALEKENGSASVPKGETINIG-RDDVSEVKKSTCCS 213
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 358 bits (919), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 174/216 (80%), Positives = 194/216 (89%), Gaps = 3/216 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS++ D K+V
Sbjct: 4 GYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWLKELRDHTD NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVM 123
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHL AV T++ AFAERE+ +FMETSALES NVENAF EVL QIYR+V ++A
Sbjct: 124 LVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRA 183
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E G+D A+ P +G+ IN+ KDDVSAVKK GCCS+
Sbjct: 184 VEAGEDAASGPGRGEKINI--KDDVSAVKKGGCCSS 217
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/220 (79%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AVSTED +FAERE+ +FMETSALE+ NV+NAF EVLTQIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E GD+ A A+P KG+ I+V DVSA+K+VGCCS+
Sbjct: 181 KAMETGDEGAASAVPSKGEKIDV--SKDVSAMKRVGCCSS 218
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/220 (78%), Positives = 197/220 (89%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AVSTED +FAERE+ +FMETSALE+ NV++AF EVLTQIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E GD+ A A+P KG+ I+V DVSA+K+VGCCS+
Sbjct: 181 KAMETGDEAAASAVPSKGEKIDVSK--DVSAMKRVGCCSS 218
>gi|115439059|ref|NP_001043809.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|20161585|dbj|BAB90506.1| putative GTP-binding protein Rab11b [Oryza sativa Japonica Group]
gi|113533340|dbj|BAF05723.1| Os01g0667600 [Oryza sativa Japonica Group]
gi|125527190|gb|EAY75304.1| hypothetical protein OsI_03195 [Oryza sativa Indica Group]
gi|125571510|gb|EAZ13025.1| hypothetical protein OsJ_02946 [Oryza sativa Japonica Group]
gi|215767078|dbj|BAG99306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/215 (79%), Positives = 192/215 (89%), Gaps = 1/215 (0%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
YRA+++YDYLFKVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT+++R DD++VK
Sbjct: 10 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVK 69
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR +TFEN ERWLKELRDHTD+NIV+ML
Sbjct: 70 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKELRDHTDANIVVML 129
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNKADLRHLRAV EDA AFAE TF METSALE+ NVE AFTEVL QIYRVVSR AL
Sbjct: 130 VGNKADLRHLRAVPAEDARAFAEAHGTFSMETSALEATNVEGAFTEVLAQIYRVVSRNAL 189
Query: 184 EIGDDPAALPKGQTINVGTKDD-VSAVKKVGCCSN 217
+IGDDPAA P+G+TI+V KDD V+ V GCCS+
Sbjct: 190 DIGDDPAAPPRGRTIDVSAKDDAVTPVNSSGCCSS 224
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 192/218 (88%), Gaps = 3/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ DDK
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVE WLKELR+HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TEDA +FAE+E+ +FMETSALE+ NVENAF EVLTQI+ +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180
Query: 181 KALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E + A +P KG I++G DVSAVKK GCCSN
Sbjct: 181 KAMEAASESANVPSKGDKIDIGK--DVSAVKKGGCCSN 216
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/220 (78%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AVSTED +FAERE+ +FMETSALE+ NV+NAF EVL QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E GD+ A A+P KG+ I+V DVSA+K+VGCCS+
Sbjct: 181 KAMETGDNAAASAVPSKGEKIDVNK--DVSAMKRVGCCSS 218
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 175/220 (79%), Positives = 194/220 (88%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED +FAE+E+ +FMETSALE+ NVE AF EVLTQIY VVS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E DD A A+P KG+ I+VG DVSA+KK GCCS+
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVGK--DVSAMKKGGCCSS 218
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 172/220 (78%), Positives = 194/220 (88%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AVSTED +FAERE+ +FMETSALE+ NV+NAF EVL QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E GD+ A A+P KG+ I+V DVSA K+VGCCS+
Sbjct: 181 KAMETGDNAAASAVPSKGEKIDVNK--DVSAKKRVGCCSS 218
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/220 (78%), Positives = 194/220 (88%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 64 MAGYRAEDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 123
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 124 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 183
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED +FAERE FFMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 184 VMLVGNKSDLRHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSK 243
Query: 181 KALEIGD--DPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KALE + + +A+P +G+ I+VG DVSAVK+ GCCS+
Sbjct: 244 KALETSEQANGSAVPSQGEKIDVG--KDVSAVKRGGCCSS 281
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/220 (77%), Positives = 193/220 (87%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YR DD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYRGDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAIT AYYRGAVGALLVYDVTRHVTFENV RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AVSTE+A + AERE +FMETSALE+ NVENAFTE LTQIYR+VS+
Sbjct: 121 VMLLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSK 180
Query: 181 KALEIGDDPA---ALPKGQTINVGTKDDVSAVKKVGCCSN 217
KA+E GD+ A A PKGQTIN+ KD+ SA KK GCCS+
Sbjct: 181 KAVEAGDEGATSTAPPKGQTINI--KDEGSAWKKFGCCSS 218
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/219 (78%), Positives = 196/219 (89%), Gaps = 5/219 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR+HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED +AERE+ +FMETSALE+ NVENAF EVLTQIYR+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 KALEIGDDPAA--LP-KGQTINVGTKDDVSAVKKVGCCS 216
K++E GD+ AA +P KG+ INV KDD SA+K+VGCCS
Sbjct: 181 KSVEGGDEGAASSVPAKGERINV--KDDASALKRVGCCS 217
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 174/220 (79%), Positives = 194/220 (88%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED +FAE+E+ +FMETSALE+ NVE AF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E DD A A+P KG+ I+VG DVSA+KK GCCS+
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVGK--DVSAMKKGGCCSS 218
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/220 (77%), Positives = 193/220 (87%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH T+ENVE+WLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTEDA +FAE E+ +FMETSALE+ NV+NAF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180
Query: 181 KALEIGDDPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
KA+E DD AA + KG+ I++ DVS VKK GCCS+
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISK--DVSEVKKGGCCSS 218
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 195/220 (88%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+S+ D+K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVT+ENV RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AVST++A AERE +FMETSALE+ NVENAFTE LTQIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180
Query: 181 KALEIGDDPA---ALPKGQTINVGTKDDVSAVKKVGCCSN 217
KA+E GD+ A A PKG+TIN+ KD+ S+ KK GCCS+
Sbjct: 181 KAVEAGDEGATSSAPPKGETINI--KDEGSSWKKFGCCSS 218
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 170/219 (77%), Positives = 199/219 (90%), Gaps = 4/219 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR+HTDSNIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNKADLRHL AVSTED ++AE+E+ +FMETSALE+ NVENAF EVLTQIYR+VS+
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 KALEIGDDP-AALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E ++ A++P KG+ I++ K+DVSA+K+VGCCS+
Sbjct: 181 KAVEGAENGNASVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 173/220 (78%), Positives = 194/220 (88%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED +FAE+E+ +FMETSALE+ NVE +F EVLTQIY V+S+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E DD A A+P KG+ I+VG DVSA+KK GCCS+
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVGK--DVSAMKKGGCCSS 218
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 352 bits (902), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 173/220 (78%), Positives = 194/220 (88%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED +FAE+E+ +FMETSALE+ NVE AF EVLTQ+Y VVS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSK 180
Query: 181 KALEIGDDPA--ALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E DD A A+P KG+ I+VG DVSA+KK GCCS+
Sbjct: 181 KAMETSDDGAASAVPSKGEKIDVGK--DVSAMKKGGCCSS 218
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 190/218 (87%), Gaps = 3/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADD+YDYLFKVVLIGDSGVGKSNLLS FT+NEFSLESKSTIGVEFATRS+ DDK
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVE WLKELR+HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TEDA +FAE+E+ +FMETSA E+ NVENAF EVLTQI+ +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSK 180
Query: 181 KALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E + A +P KG I++G DVSAVKK GCCSN
Sbjct: 181 KAMEAASESANVPSKGDKIDIGK--DVSAVKKGGCCSN 216
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 168/219 (76%), Positives = 199/219 (90%), Gaps = 4/219 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR+HTD+NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED ++AE+E+ +FMETSALE+ NVENAF EVLTQIYR+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 KALEIGDD-PAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E ++ A++P KG+ I++ K+DVSA+K+VGCCS+
Sbjct: 181 KAVEGAENGTASVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 170/219 (77%), Positives = 195/219 (89%), Gaps = 5/219 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG ++DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MGTSSSEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR+HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED +AERE+ +FMETSALE+ NVENAF EVLTQIYR+VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 180
Query: 181 KALEIGDDPAA--LP-KGQTINVGTKDDVSAVKKVGCCS 216
K++E GD+ AA +P KG+ INV KDD SA+K+VGCCS
Sbjct: 181 KSVEGGDEGAASSVPAKGERINV--KDDASALKRVGCCS 217
>gi|414881073|tpg|DAA58204.1| TPA: ras protein Rab11B [Zea mays]
Length = 220
Score = 349 bits (895), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 166/215 (77%), Positives = 191/215 (88%), Gaps = 1/215 (0%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
YRA+++YDYLFKVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT++++ DDK+VK
Sbjct: 5 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVK 64
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGAL+VYDV+R TF+N ERWL+ELRDHTD+NIV+ML
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLRELRDHTDANIVVML 124
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNKADLRHLRAVS EDA AFAER TF METSAL++ NVE AF EVL QIY VVSR AL
Sbjct: 125 VGNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNAL 184
Query: 184 EIGDDPAALPKGQTINV-GTKDDVSAVKKVGCCSN 217
+IGDDPAA P+G+TI+V KD+VS V GCCS+
Sbjct: 185 DIGDDPAAPPRGKTIDVSAAKDEVSPVNAGGCCSS 219
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 168/219 (76%), Positives = 197/219 (89%), Gaps = 4/219 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR+HTDSNIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNKADLRHL AVSTED ++AE+E+ +FMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 121 VMLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 KALEIGDDP-AALP-KGQTINVGTKDDVSAVKKVGCCSN 217
K +E ++ A++P KG+ I++ K+DVSA+K+VGCCS+
Sbjct: 181 KTVEGAENGNASVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|242053931|ref|XP_002456111.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
gi|241928086|gb|EES01231.1| hypothetical protein SORBIDRAFT_03g030650 [Sorghum bicolor]
Length = 219
Score = 348 bits (893), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 165/215 (76%), Positives = 192/215 (89%), Gaps = 1/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
YRA+++YDYLFKVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT++++ DDK+V
Sbjct: 4 GYRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLV 63
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR +TF+N ERWL+ELRDHTD+NIV+M
Sbjct: 64 KAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFDNAERWLRELRDHTDANIVVM 123
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNKADLRHLRAV+ EDA AFAER TF METSAL++ NV+ AF EVL QIY VVSR A
Sbjct: 124 LVGNKADLRHLRAVTPEDAAAFAERHGTFSMETSALDATNVDRAFAEVLRQIYHVVSRNA 183
Query: 183 LEIGDDPAALPKGQTINVG-TKDDVSAVKKVGCCS 216
L+IG+DPAA P+G+TI+VG KD+VS V GCCS
Sbjct: 184 LDIGEDPAAPPRGKTIDVGAAKDEVSPVNTGGCCS 218
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/219 (76%), Positives = 191/219 (87%), Gaps = 5/219 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG YR DD+YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT+++ D K
Sbjct: 1 MGGYRTDDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AV TED +FAERE+ +FMETSALE+ NVENAFTEVLTQIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSK 180
Query: 181 KALEIGD--DPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
+A+E GD + LP KGQTINV K+D S +K+ GCCS
Sbjct: 181 RAVEAGDSGSSSGLPSKGQTINV--KEDSSVLKRFGCCS 217
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/220 (75%), Positives = 192/220 (87%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M Y+ DD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AV TED +FAE+E+ +FMETSALE+ NVENAFTEVL+QIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KALEIGDD--PAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+ +E G + +A+P KGQTINV KDD S +KK+GCCSN
Sbjct: 181 RTVEAGKNASSSAVPSKGQTINV--KDDSSVLKKIGCCSN 218
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/220 (75%), Positives = 193/220 (87%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M Y+ DD+YDYLFK+V IGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYKGDDEYDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AV TED +FAE+E+ +FMETSALE+ NVENAFTEVL+QIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KALEIGDD--PAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+A+E G++ +A+P KGQTINV KDD S +KK+GCCSN
Sbjct: 181 RAVEAGNNASSSAVPSKGQTINV--KDDSSVLKKIGCCSN 218
>gi|195650695|gb|ACG44815.1| ras-related protein Rab11B [Zea mays]
Length = 220
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/215 (76%), Positives = 190/215 (88%), Gaps = 1/215 (0%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
YRA+++YDYLFKVVLIGDSGVGKSNLLSRF R+EFSLE++STIGVEFAT++++ DDK+VK
Sbjct: 5 YRAEEEYDYLFKVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVQVDDKLVK 64
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGAL+VYDV+R TF+N ERWL+E RDHTD+NIV+ML
Sbjct: 65 AQIWDTAGQERYRAITSAYYRGAVGALVVYDVSRRTTFDNAERWLREPRDHTDANIVVML 124
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNKADLRHLRAVS EDA AFAER TF METSAL++ NVE AF EVL QIY VVSR AL
Sbjct: 125 VGNKADLRHLRAVSPEDAAAFAERHGTFSMETSALDATNVERAFAEVLRQIYHVVSRNAL 184
Query: 184 EIGDDPAALPKGQTINV-GTKDDVSAVKKVGCCSN 217
+IGDDPAA P+G+TI+V KD+VS V GCCS+
Sbjct: 185 DIGDDPAAPPRGKTIDVSAAKDEVSPVNAGGCCSS 219
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 346 bits (888), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/217 (76%), Positives = 193/217 (88%), Gaps = 3/217 (1%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
GAYRA+DDYDYLFK V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS++ D K+
Sbjct: 7 GAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKV 66
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWLKELRDHTDS+IV+
Sbjct: 67 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVV 126
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
MLVGNK+DLRHL AVSTED +AE E+ +FMETSAL++ NV+NAF+EVLTQIYR+ SRK
Sbjct: 127 MLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRK 186
Query: 182 ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
++ GDD ++ P KG+ INV KDDVS++K+ GCCS+
Sbjct: 187 TVDAGDDGSSAPSKGENINV--KDDVSSLKRAGCCSS 221
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 166/217 (76%), Positives = 195/217 (89%), Gaps = 3/217 (1%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++ D K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELRDHTD +IV+
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
MLVGNK+DLRHL AVST+DA FAE E+ +FMETSAL++ NV+++F+EVLTQIY++VS+K
Sbjct: 126 MLVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKK 185
Query: 182 ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E ++ AA P KG+ INV KDDVSA+K+VGCCSN
Sbjct: 186 TVEASEEGAAAPGKGEKINV--KDDVSAMKRVGCCSN 220
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 167/217 (76%), Positives = 192/217 (88%), Gaps = 3/217 (1%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
GAYRA+DDYDYLFK V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS++ D K+
Sbjct: 8 GAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKV 67
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWLKELRDHTD +IV+
Sbjct: 68 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVV 127
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
MLVGNK+DLRHL AVSTED +AE E+ +FMETSAL++ NV+NAF EVLTQIY++ SRK
Sbjct: 128 MLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRK 187
Query: 182 ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
++ G+D +A P KG+ INV KDDVSA+K+VGCCSN
Sbjct: 188 TVDAGEDGSAAPSKGEKINV--KDDVSALKRVGCCSN 222
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 197/219 (89%), Gaps = 4/219 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKELR+HTD+NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED ++AE+E+ +FMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 KALEIGDD-PAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E+ ++ ++P KG+ I++ K+DVSA+K+VGCCS+
Sbjct: 181 KAVEVAENGTTSVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/217 (76%), Positives = 195/217 (89%), Gaps = 3/217 (1%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++ D K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELRDHTD +IV+
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
ML+GNK+DLRHL AVST+DA +AE E+ +FMETSAL++ NV+NAF+EVLTQIY++VS+K
Sbjct: 126 MLIGNKSDLRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKK 185
Query: 182 ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E ++ AA P KG+ INV KDDVSA+K+VGCCSN
Sbjct: 186 TVEALEEGAAGPGKGEKINV--KDDVSAMKRVGCCSN 220
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 193/218 (88%), Gaps = 3/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YR +DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++ D K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKEL++HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TED ++AE+E+ FMETSALE+ NVE+AF EVLTQIYR+ S+
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 KALEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCSN 217
K +E G+D A++PKG+ I V K+DVSA+KK+GCCSN
Sbjct: 181 KQVEAGEDGNASVPKGEKIEV--KNDVSALKKLGCCSN 216
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/220 (75%), Positives = 190/220 (86%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AV TED +FAERE+ +FMETSALE+ NVENAF+EVL+QIY +VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSK 180
Query: 181 KALEIGD--DPAALPK-GQTINVGTKDDVSAVKKVGCCSN 217
KA+E G+ +A+P GQTINV K+D S K+ GCCSN
Sbjct: 181 KAVEAGESGSSSAVPSIGQTINV--KEDSSVFKRFGCCSN 218
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 164/218 (75%), Positives = 193/218 (88%), Gaps = 3/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YR +DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+++ D K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKEL++HTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TED ++AE+E+ FMETSALE+ NVE+AF EVLTQIYR+ S+
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 KALEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCSN 217
K +E G+D A++PKG+ I V K+DVSA+KK+GCCSN
Sbjct: 181 KQVEAGEDGNASVPKGEKIEV--KNDVSALKKLGCCSN 216
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 195/217 (89%), Gaps = 3/217 (1%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++ D K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELRDHTD +IV+
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVV 125
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
MLVGNK+DLRHL AVST+DA FAE E+ +FMETSAL++ NV+++F+EVLTQIY++VS+K
Sbjct: 126 MLVGNKSDLRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKK 185
Query: 182 ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E+ ++ A P KG+ INV KDDVSA+K+VGCCSN
Sbjct: 186 TVEVPEEGAVAPGKGEKINV--KDDVSAMKRVGCCSN 220
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 344 bits (882), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/217 (76%), Positives = 192/217 (88%), Gaps = 3/217 (1%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
GAYRA+DDYDYLFK V+IGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS++ D K+
Sbjct: 7 GAYRAEDDYDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKV 66
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWLKELRDHTD +IV+
Sbjct: 67 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVV 126
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
MLVGNK+DLRHL AVSTED +AE E+ +FMETSAL++ NV+NAF+EVLTQIYR+ SRK
Sbjct: 127 MLVGNKSDLRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRK 186
Query: 182 ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
++ GDD ++ P KG+ INV KDDVS++K+ GCCS+
Sbjct: 187 TVDAGDDGSSAPSKGENINV--KDDVSSLKRAGCCSS 221
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 192/218 (88%), Gaps = 3/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YR +DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR+ + D K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFENV+RWLKEL++HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TED ++AE+E+ FMETSALE+ NVE+AF EVLTQIYR+ S+
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180
Query: 181 KALEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCSN 217
K +E G+D A++PKG+ I V K+DVSA+KK+GCCSN
Sbjct: 181 KQVEAGEDGNASVPKGEKIEV--KNDVSALKKLGCCSN 216
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 196/218 (89%), Gaps = 4/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++K+QIWDTAGQERYRAITSAYYRGA+GALLVYDVTRH TFENV+RWLKELR+HTDSNIV
Sbjct: 61 VIKSQIWDTAGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED ++ E+E+ +F+ETSALE+ NVENAF EVLTQIY VVS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSK 180
Query: 181 KALEIGDD-PAALP-KGQTINVGTKDDVSAVKKVGCCS 216
KA+E ++ A++P KG+ I++ K+DVSA+K+VGCCS
Sbjct: 181 KAVEGAENGTASVPAKGEKIDL--KNDVSALKRVGCCS 216
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 166/217 (76%), Positives = 192/217 (88%), Gaps = 3/217 (1%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++ D K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELRDHTD +IV
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVC 125
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
ML+GNK+DLRHL AVSTED FAE E+ +FMETSAL++ NV+NAF EVLTQIY++V++K
Sbjct: 126 MLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKK 185
Query: 182 ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E +D +A P KG+ INV KDDVSA+K+VGCCSN
Sbjct: 186 PVEAPEDGSAGPGKGEKINV--KDDVSAMKRVGCCSN 220
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 166/217 (76%), Positives = 192/217 (88%), Gaps = 3/217 (1%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS++ D K+
Sbjct: 6 GGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKV 65
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWL+ELRDHTD +IV
Sbjct: 66 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVC 125
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
ML+GNK+DLRHL AVSTED FAE E+ +FMETSAL++ NV+NAF EVLTQIY++V++K
Sbjct: 126 MLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKK 185
Query: 182 ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+E +D +A P KG+ INV KDDVSA+K+VGCCSN
Sbjct: 186 PVEAPEDGSAGPGKGEKINV--KDDVSAMKRVGCCSN 220
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 167/215 (77%), Positives = 188/215 (87%), Gaps = 3/215 (1%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
YRA+DDYDYLFK VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRSI+ D K+VK
Sbjct: 9 YRAEDDYDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVK 68
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TF+NV RWLKELRDHTD +IV+ML
Sbjct: 69 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVML 128
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNK+DLRHL AVSTED +AE E+ +FMETSAL++ NVENAF EVLTQIY+ VS+K +
Sbjct: 129 VGNKSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTV 188
Query: 184 EIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
E DD + P KG+ INV KDDVSA+K++GCCSN
Sbjct: 189 EASDDGSNAPIKGEKINV--KDDVSALKRIGCCSN 221
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 193/218 (88%), Gaps = 3/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRAD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT++ + + K
Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRH TFEN RWL+ELR HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK DLRHL AV TE+A AFAERE+ +FMETSAL++ NVENAFTEVLTQI+++VS+
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSK 180
Query: 181 KALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
++++ G + A LP KG+TINV K+D S +K++GCCSN
Sbjct: 181 RSVDGGGESADLPGKGETINV--KEDGSVLKRMGCCSN 216
>gi|125553326|gb|EAY99035.1| hypothetical protein OsI_20993 [Oryza sativa Indica Group]
Length = 181
Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 161/180 (89%), Positives = 171/180 (95%)
Query: 38 FSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR 97
SLESKSTIGVEFATRSI DDK+VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR
Sbjct: 1 MSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTR 60
Query: 98 HVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSA 157
HVTFENVERW++EL+DHTD+NIVIMLVGNKADLRHLRAVSTEDA AFAE+ENTFFMETSA
Sbjct: 61 HVTFENVERWMRELKDHTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSA 120
Query: 158 LESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
LESMNVENAFTEVLTQIY VVS+KAL+IGDDPAA PKGQTINVG KDDVSAVKK CCS+
Sbjct: 121 LESMNVENAFTEVLTQIYHVVSKKALDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 180
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 338 bits (867), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 163/220 (74%), Positives = 189/220 (85%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M Y+ADD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFE RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL VSTED AFAE+E+ +FMETSALE+ NVENAF+EVLTQIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 KALEIGDDPAA--LP-KGQTINVGTKDDVSAVKKVGCCSN 217
+A+E GD P+ +P +GQTINV +D S + + CCSN
Sbjct: 181 RAVEAGDRPSTSVVPSQGQTINV--NEDSSVLNRYRCCSN 218
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 193/218 (88%), Gaps = 3/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M +YRAD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFAT++ + + K
Sbjct: 1 MASYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALL+YDVTRH TFEN RWL+ELR HTD NIV
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK DLRHL AV TE+A AFAERE+ +FMETSAL++ NVE+AFTEVL+QI+++VS+
Sbjct: 121 VMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSK 180
Query: 181 KALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
++++ G D LP KG+TINV K+D S +K++GCCSN
Sbjct: 181 RSVDGGGDSTELPGKGETINV--KEDGSVLKRMGCCSN 216
>gi|302142935|emb|CBI20230.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 168/200 (84%), Positives = 173/200 (86%), Gaps = 22/200 (11%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AYRADDDYDYLFK FSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MAAYRADDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDK 38
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS+IV
Sbjct: 39 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSHIV 98
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK DLRHLRAVS +DA AFAERENTFFMETSALESMNVENAFTEVLTQIY+VVSR
Sbjct: 99 IMLVGNKGDLRHLRAVSIDDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYQVVSR 158
Query: 181 KALEIGDDPAALPKGQTINV 200
KAL+IGDDPAALPKGQTIN+
Sbjct: 159 KALDIGDDPAALPKGQTINM 178
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 166/220 (75%), Positives = 188/220 (85%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AV TED +FAERE+ +FMETSALE+ NVENAFTEVL+QIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KALE---IGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KA+E G + GQTINV K+D S +K+ GCCSN
Sbjct: 181 KAVEAGEGGSSSSVPSVGQTINV--KEDFSVLKRFGCCSN 218
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 166/220 (75%), Positives = 188/220 (85%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AV TED +FAERE+ +FMETSALE+ NVENAFTEVL+QIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KALE---IGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
KA+E G + GQTINV K+D S +K+ GCCSN
Sbjct: 181 KAVEAGEGGSSSSVPSVGQTINV--KEDSSVLKRFGCCSN 218
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 162/220 (73%), Positives = 188/220 (85%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M Y+ADD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFE RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL VSTED AFAE+E+ +FMETSALE+ NVENAF+EVLTQIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 KALEIGD--DPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+A+E GD + +P +GQTINV +D S + + CCSN
Sbjct: 181 RAVEAGDRASTSVVPSQGQTINV--NEDSSVLNRYRCCSN 218
>gi|449438915|ref|XP_004137233.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 192/220 (87%), Gaps = 6/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL++HTDSNIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TED ++AERE+ +F+ETSALE++NVE AF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
Query: 181 KALEIGDD--PAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E G++ +A+P +G+ IN+ D S + ++ CCS+
Sbjct: 181 KAVEGGENGSASAVPAQGEKINI---KDESGLNRIKCCSS 217
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/220 (73%), Positives = 186/220 (84%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M Y+ADD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEF T+S+ D K
Sbjct: 1 MAGYKADDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFE RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL VSTED AFAE+E+ +FMETSALE+ NVENAF+EVLTQIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSK 180
Query: 181 KALEIGDDPA---ALPKGQTINVGTKDDVSAVKKVGCCSN 217
+A+E GD + A +GQTINV +D S + + CCSN
Sbjct: 181 RAVEAGDRASTSVAPSQGQTINV--NEDSSVLNRYRCCSN 218
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/221 (72%), Positives = 190/221 (85%), Gaps = 6/221 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M Y+ D+YDYLFK+VLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYKGHDEYDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD N+V
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK DLRHL V TED +FAERE+ +FMETSAL++ NVE+AFTEVL+QIYR+VS+
Sbjct: 121 VMLIGNKCDLRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSK 180
Query: 181 KALEIGDDPAA---LP-KGQTINVGTKDDVSAVKKVGCCSN 217
+++E GD +A LP KGQTI+V KDD S +K++GCCS+
Sbjct: 181 RSVEAGDIGSASTTLPSKGQTIDV--KDDSSVLKRIGCCSS 219
>gi|449521271|ref|XP_004167653.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 217
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/220 (72%), Positives = 191/220 (86%), Gaps = 6/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQ RYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKEL++HTDSNIV
Sbjct: 61 VIKAQIWDTAGQGRYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELKNHTDSNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AV TED ++AERE+ +F+ETSALE++NVE AF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVPTEDGKSYAERESLYFIETSALEAVNVEKAFAEVLTQIYHIVSK 180
Query: 181 KALEIGDD--PAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E G++ +A+P +G+ IN+ D S + ++ CCS+
Sbjct: 181 KAVEGGENGSASAVPAQGEKINI---KDESGLNRIKCCSS 217
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 328 bits (842), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 160/213 (75%), Positives = 176/213 (82%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+ DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+ D K +KA
Sbjct: 4 KPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENVERWLKELRDH D+NIVIMLV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADANIVIMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DLRHLR+V TEDA AF ERE F+ETSALE+ NVE AF +LT+IY +VS+KAL
Sbjct: 124 GNKSDLRHLRSVQTEDAKAFCEREGLSFIETSALEATNVEQAFQRILTEIYHIVSKKALA 183
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D PAA P T T+ A KK CCS+
Sbjct: 184 SEDGPAAAPTSGTAIKVTEAAPEAKKKSTCCSS 216
>gi|168048483|ref|XP_001776696.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671988|gb|EDQ58532.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/214 (74%), Positives = 181/214 (84%), Gaps = 1/214 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A++ADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+ D K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL+HLR VST+DA AF+E+E F+ETSALES NVE AF +LT+IYR+VS+KA
Sbjct: 122 LVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
L ++ P GQ N+ D + K GCCS
Sbjct: 182 LASEENTTEGP-GQGTNIVPLDSNAPDLKKGCCS 214
>gi|168027772|ref|XP_001766403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682312|gb|EDQ68731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 325 bits (833), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 159/214 (74%), Positives = 182/214 (85%), Gaps = 2/214 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A++ADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+ D K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL+HLR VST+DA AF+E+E F+ETSALES NVE AF +LT+IYR+VS+KA
Sbjct: 122 LVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKD-DVSAVKKVGCC 215
L ++ P GQ N+ D + +KK GCC
Sbjct: 182 LASEENTTEGP-GQGTNIVPLDSNAPDLKKKGCC 214
>gi|168041027|ref|XP_001772994.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675727|gb|EDQ62219.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 325 bits (833), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 182/216 (84%), Gaps = 2/216 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A++ADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+ D K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLR VS +DA +FAE+E F+ETSALES NVE AF +LT+IYR+VS+KA
Sbjct: 122 LVGNKSDLRHLRGVSLDDAQSFAEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSA-VKKVGCCSN 217
L ++ P GQ N+ D S +KK GCC +
Sbjct: 182 LASEENATEGP-GQGTNIVPLDSNSPDLKKKGCCGD 216
>gi|168006845|ref|XP_001756119.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692629|gb|EDQ78985.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 158/214 (73%), Positives = 182/214 (85%), Gaps = 2/214 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A++ADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+ D K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL+HLR VST+DA +F+E+E F+ETSALES NVE AF +LT+IYR+VS+KA
Sbjct: 122 LVGNKSDLKHLRGVSTDDAQSFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKD-DVSAVKKVGCC 215
L ++ P GQ N+ D + +KK GCC
Sbjct: 182 LASEENTTEGP-GQGTNIVPLDSNAPDLKKKGCC 214
>gi|168008990|ref|XP_001757189.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162691687|gb|EDQ78048.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/214 (74%), Positives = 180/214 (84%), Gaps = 2/214 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A++ADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+ D K +
Sbjct: 2 AHKADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL+HLR V T+DA AF+E+E F+ETSALES NVE AF +LT+IYR+VS+KA
Sbjct: 122 LVGNKSDLKHLRGVPTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIYRIVSKKA 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSA-VKKVGCC 215
L + P GQ N+ D S +KK GCC
Sbjct: 182 LASEESTTEGP-GQGTNIVPLDSNSPDLKKKGCC 214
>gi|255644368|gb|ACU22689.1| unknown [Glycine max]
Length = 193
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 151/184 (82%), Positives = 171/184 (92%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR+HTD+NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHL AVSTED ++AE+E+ +FMETSALE+ NVENAF EVLTQIY +VS+
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180
Query: 181 KALE 184
KA+E
Sbjct: 181 KAVE 184
>gi|384247834|gb|EIE21319.1| ras-related protein Rab2BV [Coccomyxa subellipsoidea C-169]
Length = 214
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/213 (73%), Positives = 175/213 (82%), Gaps = 2/213 (0%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
++ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI+ D K +K
Sbjct: 3 HKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIQVDGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ VTFENVERWLKELRDH DSNIVIML
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQVTFENVERWLKELRDHADSNIVIML 122
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNK+DLRHLR+V T+D+ AF E+E F+ETSALES NVE AF +LT+IY +VS+KAL
Sbjct: 123 VGNKSDLRHLRSVQTDDSQAFCEKEGLSFIETSALESTNVEQAFQRILTEIYHIVSKKAL 182
Query: 184 EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
D P P T V ++ KK CCS
Sbjct: 183 ASEDKPQ--PDKGTRIVVSETQPEEKKKSACCS 213
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/211 (73%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ +YDYLFKVVLIGDSG GKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K VKAQ
Sbjct: 221 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQ 280
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVG
Sbjct: 281 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVG 340
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T++A AFA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 341 NKSDLRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQS 400
Query: 186 GDDPAALPKGQTINV-GTKDDVSAVKKVGCC 215
DD G+TI V + DD A KK GCC
Sbjct: 401 SDDVIKPSGGETITVQPSADDGGATKKNGCC 431
>gi|1279542|emb|CAA95859.1| small GTPase [Mangifera indica]
Length = 217
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 180/218 (82%), Gaps = 4/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M +RA+DDYDYLFKV LIGDSGVGKSNL RFTRNEFSLESKSTIGVEFATRS+ D K
Sbjct: 1 MAGFRAEDDYDYLFKVGLIGDSGVGKSNLALRFTRNEFSLESKSTIGVEFATRSLNVDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AVSTED AERE+ FMETSALE+ NV+NAF EVL++ +++R
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGNLLAERESLSFMETSALEATNVDNAFAEVLSKSTALLAR 180
Query: 181 K--ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+ L I D A K + I+V DVSAVKKVGCCS
Sbjct: 181 RLWKLVIIDQDAVPSKSEKIDVSK--DVSAVKKVGCCS 216
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/215 (73%), Positives = 178/215 (82%), Gaps = 1/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
+++ DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+ D K +
Sbjct: 2 SHKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ VTFENVERWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL+HLR V TE A AF ERE F+ETSALES NVE AF ++LT+IY +VS+K
Sbjct: 122 LVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKV 181
Query: 183 LEIGDDPAALPKGQ-TINVGTKDDVSAVKKVGCCS 216
L+ D+ + +G+ I + D KK GCCS
Sbjct: 182 LDSEDNRPKIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/215 (72%), Positives = 178/215 (82%), Gaps = 2/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I+ D K +
Sbjct: 2 APRPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ T+ENVERWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL+HLR V+T+DA F+E+E F+ETSALE+ NVE AF +LT+IYR+VS+KA
Sbjct: 122 LVGNKSDLKHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
L D P +G+ I VG + D + KK CCS
Sbjct: 182 LASEDPVLVGPGEGKAIIVGPEQDAN-TKKKACCS 215
>gi|260820529|ref|XP_002605587.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
gi|229290921|gb|EEN61597.1| hypothetical protein BRAFLDRAFT_266781 [Branchiostoma floridae]
Length = 217
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 152/211 (72%), Positives = 175/211 (82%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--E 184
K+DLRHLRAV T++A AFAE+ + F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNSLSFIETSALDSTNVETAFQNILTEIYHIVSQKQIRDS 184
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
GDD + QTI V D KK+ CC
Sbjct: 185 PGDDESPSTNVQTITVAPTTDADTKKKLACC 215
>gi|428174833|gb|EKX43726.1| hypothetical protein GUITHDRAFT_159767 [Guillardia theta CCMP2712]
Length = 218
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 180/212 (84%), Gaps = 2/212 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVTFENV+RWLKELRDH D NIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTFENVDRWLKELRDHADHNIVIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV+T+DA +AE+ N F+ETSAL+S NVE AF +LT+IYR+VSR+ +E G
Sbjct: 124 KSDLRHLRAVATDDARGYAEQRNLSFIETSALDSTNVEQAFQTILTEIYRLVSRRPMEAG 183
Query: 187 D--DPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+ D ++ +G+ + V +D+ A ++ CS
Sbjct: 184 ESGDSPSVGQGEKVIVSREDETKAAERKSKCS 215
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/211 (73%), Positives = 171/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ +YDYLFKVVLIGDSG GKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K VKAQ
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 123 NKSDLRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQS 182
Query: 186 GDDPAALPKGQTINV-GTKDDVSAVKKVGCC 215
DD G+TI V + DD KK GCC
Sbjct: 183 SDDVIKPSGGETITVQPSADDGGQTKKNGCC 213
>gi|443733114|gb|ELU17603.1| hypothetical protein CAPTEDRAFT_226009 [Capitella teleta]
Length = 214
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/211 (72%), Positives = 176/211 (83%), Gaps = 3/211 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IY++VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDS 184
Query: 187 DDPAALPKG--QTINVGTKDDVSAVKKVGCC 215
D P QTI V D+ SA KK CC
Sbjct: 185 PDDENSPSNNVQTITVAPTDN-SADKKQKCC 214
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 154/211 (72%), Positives = 171/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ +YDYLFKVVLIGDSG GKSNLLSRFTRNEFSLESKSTIGVEFATRSI D K VKAQ
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T++A AFA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 123 NKSDLRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQS 182
Query: 186 GDDPAALPKGQTINV-GTKDDVSAVKKVGCC 215
DD G+TI V + DD KK GCC
Sbjct: 183 SDDVIKPSGGETITVQPSADDGGQTKKNGCC 213
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 156/218 (71%), Positives = 180/218 (82%), Gaps = 4/218 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC---DD 59
+++ DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+ D
Sbjct: 2 SHKQDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDG 61
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ VTFENVERWLKELRDH D+NI
Sbjct: 62 KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANI 121
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
VIMLVGNK+DL+HLR V TE A AF ERE F+ETSAL+S NVE AF ++LT+IY +VS
Sbjct: 122 VIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVS 181
Query: 180 RKALEIGDDPAALPKGQ-TINVGTKDDVSAVKKVGCCS 216
+K L+ D+ + +G+ I + + D A KK GCCS
Sbjct: 182 KKVLDSEDNRPKIGEGRDLIVIDKQHDDGAKKKGGCCS 219
>gi|301088725|ref|XP_002894778.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108813|gb|EEY66865.1| Rab11 family GTPase, putative [Phytophthora infestans T30-4]
Length = 218
Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 179/213 (84%), Gaps = 4/213 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI + K +KAQI
Sbjct: 6 EDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+H TFENVERWLKELRDH D+N VIMLVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAVSTE+A AFAE+ N F+ETSALE+ V++AF +LT+IY+++SRK ++
Sbjct: 126 KSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDSAFQRILTEIYKLMSRKTIQAE 185
Query: 187 DD-PAALPKGQTINV---GTKDDVSAVKKVGCC 215
++ A+LP G +I + T + KK GCC
Sbjct: 186 ENASASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|348674018|gb|EGZ13837.1| hypothetical protein PHYSODRAFT_513156 [Phytophthora sojae]
Length = 218
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 178/213 (83%), Gaps = 4/213 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI + K +KAQI
Sbjct: 6 EDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIVAEGKTIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+H TFENVERWLKELRDH D+N VIMLVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHGTFENVERWLKELRDHADANTVIMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAVSTE+A AFAE+ N F+ETSALE+ V+ AF +LT+IY+++SRK ++
Sbjct: 126 KSDLRHLRAVSTEEAMAFAEKNNLAFIETSALEATGVDTAFQRILTEIYKLMSRKTIQAE 185
Query: 187 DDP-AALPKGQTINV---GTKDDVSAVKKVGCC 215
++ A+LP G +I + T + KK GCC
Sbjct: 186 ENATASLPTGNSIAITAENTTESQKKKKKSGCC 218
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 182/217 (83%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA +AE+E F+ETSALE+ NVENAF +L +IYR++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKS 181
Query: 183 LEIGDDPAA--LPKGQTINVGTKDDVSAVKKVGCCSN 217
L +DPAA + +G+TI VG + + K CC++
Sbjct: 182 LS-SNDPAANIIKEGKTITVGGAPEPN-TNKPSCCTS 216
>gi|31324876|gb|AAP48704.1| rab11-2 [Limulus polyphemus]
Length = 217
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/218 (70%), Positives = 179/218 (82%), Gaps = 6/218 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG+ DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGS--KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE+AF ++LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVESAFQQILTEIYRIVSQ 178
Query: 181 KALEIGDDPAALPKG---QTINVGTKDDVSAVKKVGCC 215
K + D P G + I++ D S +K CC
Sbjct: 179 KQIRNDTDNDPSPSGDNVKPISIAPTDS-SDTRKKQCC 215
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 176/215 (81%), Gaps = 2/215 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A + D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +
Sbjct: 2 ATKDSDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLRAV T+D+ +FAE+ N F+ETSAL++ NVE AF +LT+IY +VS+K
Sbjct: 122 LVGNKSDLRHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKT 181
Query: 183 LEIGDDPAALPKG--QTINVGTKDDVSAVKKVGCC 215
+ D A +P QTI V + KK GCC
Sbjct: 182 IVNDDHVAKVPTSNVQTITVAPSEATDDKKKGGCC 216
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/218 (69%), Positives = 183/218 (83%), Gaps = 7/218 (3%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA ++AE+E F+ETSALE+ NVE AF +L++IYR++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
Query: 183 LEIGDDPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
L ++PAA + +G+TI VG + A K CCS+
Sbjct: 182 LN-SEEPAAANNIKEGKTIVVGESE---ANTKKACCSS 215
>gi|225712176|gb|ACO11934.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 178/212 (83%), Gaps = 1/212 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLF+VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K VKAQI
Sbjct: 5 DEEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENV+RWL+ELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DLRHLRAV T++A FAE+ N F+ETSAL+S NVE AF +LT+IYR+VSRK+L
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSRKSLPDS 184
Query: 187 DDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+ A P G TI++G+ ++ K CC+N
Sbjct: 185 GNSGAGPDDGSTIDIGSTVTENSGNKKPCCNN 216
>gi|417409144|gb|JAA51094.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 261
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 230 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 260
>gi|225712522|gb|ACO12107.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
gi|290561260|gb|ADD38032.1| Ras-related protein Rab-11B [Lepeophtheirus salmonis]
Length = 216
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 178/212 (83%), Gaps = 1/212 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K VKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENV+RWL+ELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DLRHLRAV T++A FAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K+L
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQKSLPDS 184
Query: 187 DDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
+ A P G TI++G+ ++ K CC+N
Sbjct: 185 GNSGAGPDDGSTIDIGSTVTENSGNKKPCCNN 216
>gi|348542088|ref|XP_003458518.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
gi|410912336|ref|XP_003969646.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 173/211 (81%), Gaps = 1/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSER 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P +N+ + + K+ CC N
Sbjct: 185 QESDMSPSNNVVNIQVQPTENK-PKMQCCQN 214
>gi|194387154|dbj|BAG59943.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 50 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 109
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 110 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 169
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 170 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 229
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 230 RENDTSPSNNVVPIHVPPTTENKPKVQCCQN 260
>gi|432958664|ref|XP_004086096.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Oryzias
latipes]
Length = 215
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSER 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P +N+ + K+ CC N
Sbjct: 185 QESDMSPSNNVVNIQVPPTENK-PKMQCCQN 214
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 173/210 (82%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA + F+ETSA ++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
GD P+ G I + + SA K CC
Sbjct: 182 GDTPSMPQTGTNIALSNPTEDSAAKNGKCC 211
>gi|156360921|ref|XP_001625271.1| predicted protein [Nematostella vectensis]
gi|156212096|gb|EDO33171.1| predicted protein [Nematostella vectensis]
Length = 218
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/215 (71%), Positives = 178/215 (82%), Gaps = 7/215 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFHNILTEIYHIVSQK--QIH 182
Query: 187 DDPA---ALPKG--QTINVGTKDDVSAVKKVGCCS 216
D P+ + P QTI+V D K+V CC+
Sbjct: 183 DSPSSDGSHPSNNVQTIHVAPTTDDDRKKRVQCCN 217
>gi|149391443|gb|ABR25739.1| ras-related protein rab11b [Oryza sativa Indica Group]
Length = 165
Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/164 (89%), Positives = 156/164 (95%)
Query: 54 SIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRD 113
SI DDK+VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHVTFENVERW++EL+D
Sbjct: 1 SIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKD 60
Query: 114 HTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQ 173
HTD+NIVIMLVGNKADLRHLRAVSTEDA AFAE+ENTFFMETSALESMNVENAFTEVLTQ
Sbjct: 61 HTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQ 120
Query: 174 IYRVVSRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
IY VVS+KAL+IGDDPAA PKGQTINVG KDDVSAVKK CCS+
Sbjct: 121 IYHVVSKKALDIGDDPAAPPKGQTINVGGKDDVSAVKKSACCSS 164
>gi|313231377|emb|CBY08492.1| unnamed protein product [Oikopleura dioica]
Length = 217
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 149/212 (70%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI + K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVEGKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 64 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHTTYENVERWLKELRDHADNNIVIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV TEDA +AER++ F+ETSAL+S NVE AF +LT+IY++VS+K L
Sbjct: 124 KSDLRHLRAVPTEDARNYAERQSLSFIETSALDSTNVETAFQNILTEIYKIVSQKQLGDS 183
Query: 187 DDPAALPKGQTINVGTKDDVSA--VKKVGCCS 216
D LP +++ D KK GCC+
Sbjct: 184 DRGGDLPDNDVVDIHVPDSTPGNQRKKSGCCN 215
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 181/217 (83%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA ++AE+E F+ETSALE++NVE AF +L++IYR++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKS 181
Query: 183 LEIGDDP--AALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ A++ +GQTI+V + +A K CCS+
Sbjct: 182 ISSDQTTANASIKEGQTIDVAATSESTAKKP--CCSS 216
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 176/211 (83%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD P A + G I++ D SA K CC
Sbjct: 182 GDGPQATIGAGPGISLTKPADDSAEKSGKCC 212
>gi|449478127|ref|XP_004155229.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 220
Score = 309 bits (791), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 181/216 (83%), Gaps = 7/216 (3%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA ++AE+E F+ETSALE+ NVE AF +L++IYR++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
Query: 183 LEIGDDPAA---LPKGQTINVGTKDDVSAVKKVGCC 215
L ++PAA + +G+TI VG + A K CC
Sbjct: 182 LN-SEEPAAANNIKEGKTIVVGESE---ANTKKACC 213
>gi|387017926|gb|AFJ51081.1| ras-related protein Rab-11A [Crotalus adamanteus]
Length = 217
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 173/217 (79%), Gaps = 1/217 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGGSR-DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 120 IMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 179
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
K + + P + + K+ CC N
Sbjct: 180 KQMSDRRENDMSPSNNVVPIHVPPTTENKPKMQCCQN 216
>gi|67078858|gb|AAY64453.1| small GTPase rab11-3 [Gracilaria lemaneiformis]
Length = 214
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/212 (69%), Positives = 177/212 (83%), Gaps = 1/212 (0%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R+DD+YDYLFKVVLIGD+GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+C+ KI+KA
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV+RWLKEL+DH D+NIVIMLV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL+HL+AV+T+DA+AFAE F+ETSAL++ NVE AF +L++IYR+ S+KALE
Sbjct: 123 GNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALE 182
Query: 185 IGDDPAALPKG-QTINVGTKDDVSAVKKVGCC 215
G P QTI + D +K CC
Sbjct: 183 KGSTSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|255644522|gb|ACU22764.1| unknown [Glycine max]
Length = 195
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 144/183 (78%), Positives = 165/183 (90%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M Y+ DD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D K
Sbjct: 1 MAGYKGDDEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN RWLKELRDHTD NIV
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+ML+GNK+DLRHL AV TED +FAE+E+ +FMETSALE+ NVENAFTEVL+QIYR+VS+
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSK 180
Query: 181 KAL 183
+ +
Sbjct: 181 RTV 183
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 179/217 (82%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D++YDYLFKVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA ++AE+E F+ETSALE+ NV+ AF +L++IYR++S+K
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKT 181
Query: 183 L--EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L E P ++ G+TI VG D + KK CCS+
Sbjct: 182 LSSEESAAPVSVKDGKTIVVGGPD--PSTKKTTCCSS 216
>gi|30584069|gb|AAP36283.1| Homo sapiens RAB11A, member RAS oncogene family [synthetic
construct]
gi|54697166|gb|AAV38955.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|54697172|gb|AAV38958.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|60653915|gb|AAX29650.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365501|gb|AAX42718.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61365507|gb|AAX42719.1| RAB11A member RAS oncogene family [synthetic construct]
Length = 217
Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|4758984|ref|NP_004654.1| ras-related protein Rab-11A isoform 1 [Homo sapiens]
gi|13592148|ref|NP_112414.1| ras-related protein Rab-11A [Rattus norvegicus]
gi|31980840|ref|NP_059078.2| ras-related protein Rab-11A [Mus musculus]
gi|54792725|ref|NP_001003276.1| ras-related protein Rab-11A [Canis lupus familiaris]
gi|72535192|ref|NP_001026958.1| ras-related protein Rab-11A [Sus scrofa]
gi|126722661|ref|NP_001075720.1| ras-related protein Rab-11A [Oryctolagus cuniculus]
gi|197102306|ref|NP_001127429.1| ras-related protein Rab-11A [Pongo abelii]
gi|387763102|ref|NP_001248718.1| ras-related protein Rab-11A [Macaca mulatta]
gi|114657631|ref|XP_510490.2| PREDICTED: uncharacterized protein LOC453523 isoform 2 [Pan
troglodytes]
gi|126277069|ref|XP_001367185.1| PREDICTED: ras-related protein Rab-11A-like isoform 1 [Monodelphis
domestica]
gi|296213515|ref|XP_002753302.1| PREDICTED: ras-related protein Rab-11A [Callithrix jacchus]
gi|301756939|ref|XP_002914304.1| PREDICTED: ras-related protein Rab-11A-like [Ailuropoda
melanoleuca]
gi|332235938|ref|XP_003267162.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Nomascus
leucogenys]
gi|344293421|ref|XP_003418421.1| PREDICTED: ras-related protein Rab-11A-like [Loxodonta africana]
gi|348555429|ref|XP_003463526.1| PREDICTED: ras-related protein Rab-11A-like [Cavia porcellus]
gi|354493388|ref|XP_003508824.1| PREDICTED: ras-related protein Rab-11A-like [Cricetulus griseus]
gi|395822367|ref|XP_003784490.1| PREDICTED: ras-related protein Rab-11A [Otolemur garnettii]
gi|397515596|ref|XP_003828035.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Pan paniscus]
gi|402874623|ref|XP_003901132.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Papio anubis]
gi|403300395|ref|XP_003940926.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Saimiri
boliviensis boliviensis]
gi|410960994|ref|XP_003987071.1| PREDICTED: ras-related protein Rab-11A [Felis catus]
gi|426232574|ref|XP_004010297.1| PREDICTED: ras-related protein Rab-11A [Ovis aries]
gi|426379447|ref|XP_004056409.1| PREDICTED: ras-related protein Rab-11A isoform 1 [Gorilla gorilla
gorilla]
gi|50402540|sp|P62494.3|RB11A_RAT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=24KG; Flags: Precursor
gi|50402541|sp|P62490.3|RB11A_CANFA RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402542|sp|P62491.3|RB11A_HUMAN RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; AltName:
Full=YL8; Flags: Precursor
gi|50402543|sp|P62492.3|RB11A_MOUSE RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|50402544|sp|P62493.3|RB11A_RABIT RecName: Full=Ras-related protein Rab-11A; Short=Rab-11; Flags:
Precursor
gi|75056558|sp|Q52NJ1.3|RB11A_PIG RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|75070685|sp|Q5R9M7.3|RB11A_PONAB RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|20379068|gb|AAM21094.1|AF498946_1 small GTP binding protein RAB11A [Homo sapiens]
gi|917|emb|CAA39799.1| rab11 [Canis lupus familiaris]
gi|35889|emb|CAA37300.1| unnamed protein product [Homo sapiens]
gi|206567|gb|AAA42012.1| ras p21-like small GTP-binding protein [Rattus norvegicus]
gi|310067|gb|AAA31491.1| tubulovesicle-associated protein [Oryctolagus cuniculus]
gi|505541|emb|CAA40064.1| H rab11 small GTP binding protein [Homo sapiens]
gi|2149975|gb|AAC32887.1| rab11a [Homo sapiens]
gi|12852002|dbj|BAB29233.1| unnamed protein product [Mus musculus]
gi|14715109|gb|AAH10722.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|15426487|gb|AAH13348.1| RAB11A protein [Homo sapiens]
gi|47115275|emb|CAG28597.1| RAB11A [Homo sapiens]
gi|49168474|emb|CAG38732.1| RAB11A [Homo sapiens]
gi|54697162|gb|AAV38953.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|54697168|gb|AAV38956.1| RAB11A, member RAS oncogene family [Homo sapiens]
gi|55249677|gb|AAH85727.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|55729608|emb|CAH91533.1| hypothetical protein [Pongo abelii]
gi|61355506|gb|AAX41147.1| RAB11A member RAS oncogene family [synthetic construct]
gi|61355514|gb|AAX41148.1| RAB11A member RAS oncogene family [synthetic construct]
gi|62868644|gb|AAY17510.1| Ras-related protein Rab-11A [Sus scrofa]
gi|74151140|dbj|BAE27693.1| unnamed protein product [Mus musculus]
gi|74204974|dbj|BAE20971.1| unnamed protein product [Mus musculus]
gi|74205093|dbj|BAE21003.1| unnamed protein product [Mus musculus]
gi|112292979|dbj|BAF02867.1| Rab11A [Mus musculus]
gi|119598158|gb|EAW77752.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119598159|gb|EAW77753.1| RAB11A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123992443|gb|ABM83980.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|123999492|gb|ABM87302.1| RAB11A, member RAS oncogene family [synthetic construct]
gi|148694121|gb|EDL26068.1| RAB11a, member RAS oncogene family [Mus musculus]
gi|149041958|gb|EDL95799.1| RAB11a, member RAS oncogene family [Rattus norvegicus]
gi|189053091|dbj|BAG34713.1| unnamed protein product [Homo sapiens]
gi|296483650|tpg|DAA25765.1| TPA: Ras-related protein Rab-11A [Bos taurus]
gi|344235576|gb|EGV91679.1| Ras-related protein Rab-11A [Cricetulus griseus]
gi|351695550|gb|EHA98468.1| Ras-related protein Rab-11A [Heterocephalus glaber]
gi|355692810|gb|EHH27413.1| hypothetical protein EGK_17606 [Macaca mulatta]
gi|355778116|gb|EHH63152.1| hypothetical protein EGM_16064 [Macaca fascicularis]
gi|380817586|gb|AFE80667.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|383422481|gb|AFH34454.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|384950094|gb|AFI38652.1| ras-related protein Rab-11A isoform 1 [Macaca mulatta]
gi|410220856|gb|JAA07647.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410306776|gb|JAA31988.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|410342705|gb|JAA40299.1| RAB11A, member RAS oncogene family [Pan troglodytes]
gi|431895896|gb|ELK05314.1| Ras-related protein Rab-11A [Pteropus alecto]
gi|432092221|gb|ELK24845.1| Ras-related protein Rab-11A [Myotis davidii]
gi|1089909|prf||2018147A GTP-binding protein rab11
Length = 216
Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 177/217 (81%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+I+ + K V
Sbjct: 2 AYKVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L GNK+DL HLRAVS++DA AE+E F+ETSALE++NVE AF +L IY+++S+KA
Sbjct: 122 LAGNKSDLNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKA 181
Query: 183 LEIGDDPA--ALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + + ++P G TINV V+K CCSN
Sbjct: 182 LAAQESASTTSVPHGTTINVSNMS--GTVEKKSCCSN 216
>gi|325190342|emb|CCA24816.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 216
Score = 308 bits (790), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 176/211 (83%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+DDYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+SI + K +KAQI
Sbjct: 6 EDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+HV+FENVERWLKELR+H D+N VIMLVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV TE+A AFAE+ N F+ETSALE++ V++AF +LT+IY+++SRK ++
Sbjct: 126 KSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQAE 185
Query: 187 DDPAALPKGQTINVGTKDDVSAV--KKVGCC 215
++ ++P G I + + V KK CC
Sbjct: 186 ENQISIPSGDNIVITSDKTEEGVKKKKSSCC 216
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 176/211 (83%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD P A + G I++ D SA K CC
Sbjct: 182 GDGPQATIGAGPGISLTKPADDSAEKGGKCC 212
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 12 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 71
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 72 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 131
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 132 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 189
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 190 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 224
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 171/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ +YDYLFKVVLIGDSG GKSNLLSRFTRNEFSL+S+STIGVEFATRSI D K +KAQ
Sbjct: 3 AESNYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIV+MLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA N F+ETSAL++ NVE AF +LT+IY +VS KAL+
Sbjct: 123 NKSDLRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQS 182
Query: 186 GDDPAALPKGQTINV-GTKDDVSAVKKVGCC 215
DD G+TI+V + DD KK GCC
Sbjct: 183 SDDVIKPSGGETISVQPSTDDGGQTKKGGCC 213
>gi|7108528|gb|AAF36458.1|AF127669_1 small GTPase [Mus musculus]
Length = 216
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKHMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|325191836|emb|CCA26309.1| Rab11 family GTPase putative [Albugo laibachii Nc14]
Length = 380
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 176/211 (83%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+DDYDYLFK+VLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFAT+SI + K +KAQI
Sbjct: 170 EDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQI 229
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+HV+FENVERWLKELR+H D+N VIMLVGN
Sbjct: 230 WDTAGQERYRAITSAYYRGAVGALLVYDITKHVSFENVERWLKELREHADANTVIMLVGN 289
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV TE+A AFAE+ N F+ETSALE++ V++AF +LT+IY+++SRK ++
Sbjct: 290 KSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTMQAE 349
Query: 187 DDPAALPKGQTINVGTKDDVSAV--KKVGCC 215
++ ++P G I + + V KK CC
Sbjct: 350 ENQISIPSGDNIVITSDKTEEGVKKKKSSCC 380
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 174/217 (80%), Gaps = 3/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVST+DA AERE F+ETSALE+ NVE AF +L IY+++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKA 181
Query: 183 L--EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + +LP G TINV S KK CCSN
Sbjct: 182 LAAQGAASTTSLPHGTTINVSNMSG-SVEKKSACCSN 217
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPTKLQCCQN 217
>gi|387914788|gb|AFK11003.1| ras-related protein Rab-11A isoform 1 [Callorhinchus milii]
Length = 216
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 169/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTTKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + K+ CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|159906379|gb|ABX10878.1| RAB11B [Anas platyrhynchos]
Length = 216
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + K+ CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTGNKPKMQCCQN 215
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 179/217 (82%), Gaps = 5/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K +
Sbjct: 2 AHRMDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN++RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V+ ED A AE+E F+ETSALE++NVE AF VL+ I++++S+KA
Sbjct: 122 MVGNKSDLNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKA 181
Query: 183 LEIGDDPAALPKGQ--TINVGTKDDVSAVKKVGCCSN 217
L + + P GQ TIN+ D SA K GCCS+
Sbjct: 182 LAAQEAAGSGPPGQGTTINIA---DPSANTKRGCCSS 215
>gi|76257404|gb|ABA41006.1| Rab11 protein [Aiptasia pulchella]
Length = 218
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/215 (71%), Positives = 176/215 (81%), Gaps = 7/215 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIM VGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMQVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IY +VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVEVAFQNILTEIYHIVSQK--QIH 182
Query: 187 DDP---AALPKG--QTINVGTKDDVSAVKKVGCCS 216
D P + P QTI+V D K+V CC+
Sbjct: 183 DSPTSDGSHPSNNVQTIHVAPTTDEDRRKRVQCCN 217
>gi|57524801|ref|NP_001005827.1| ras-related protein Rab-11A [Gallus gallus]
gi|82233797|sp|Q5ZJN2.1|RB11A_CHICK RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|53133464|emb|CAG32061.1| hypothetical protein RCJMB04_16p4 [Gallus gallus]
Length = 216
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + K+ CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 178/217 (82%), Gaps = 5/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN++RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED A AE+E F+ETSALE++NVE AF VL+ I++++S+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKA 181
Query: 183 LEIGDDPAALPKGQ--TINVGTKDDVSAVKKVGCCSN 217
L + + P GQ TINV D SA K GCCS+
Sbjct: 182 LAAQEAAGSGPPGQGTTINVA---DSSANMKGGCCSS 215
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/221 (69%), Positives = 178/221 (80%), Gaps = 8/221 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGA--RDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178
Query: 181 KALEIGDDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
K +I D A P +++ K K+ CC N
Sbjct: 179 K--QIADRSAHDESPGNNVVDISVPPTTDGQKSSKLQCCQN 217
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/215 (68%), Positives = 177/215 (82%), Gaps = 4/215 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 ANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL+HLRAVS ED A AE+E F+ETSALE++N+E AF +LT+IY ++S+KA
Sbjct: 122 MAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
L + + LP +G TINV D SA ++ CCS
Sbjct: 182 LAAQEASSNLPGQGTTINVA---DASANQRRSCCS 213
>gi|488700|emb|CAA55865.1| Rab [Medicago sativa]
Length = 217
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/219 (69%), Positives = 184/219 (84%), Gaps = 4/219 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF+LESKSTIGVEFATR++ D K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV + +
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHGTFENVRQMAERTAKPHRFQHC 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+LVGNKADLRHL AVSTED ++AE+E+ +FMETSALE+ NVEN+F EVLTQIYR++S+
Sbjct: 121 CVLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSK 180
Query: 181 KALEIGDDP-AALP-KGQTINVGTKDDVSAVKKVGCCSN 217
KA+E ++ A++P KG+ I++ K+DVSA+K+VGCCS+
Sbjct: 181 KAVEGAENGNASVPAKGEKIDL--KNDVSALKRVGCCSS 217
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 174/209 (83%), Gaps = 1/209 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLFKVVLIGDSGVGK+NLLSRFTRNEF+LESKSTIGVEFATRSI+ D K++KAQI
Sbjct: 4 DEEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++H T+E+VERWLKELRDH DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A FA F+ETSAL++ NV+ +F ++LT+IYR+VS KALE
Sbjct: 124 KSDLRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALESS 183
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
++ GQTI V D K+ GCC
Sbjct: 184 NNTIKPTSGQTILVSQTPD-EQTKQGGCC 211
>gi|349603694|gb|AEP99464.1| Ras-like protein Rab-11B-like protein [Equus caballus]
Length = 275
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DCAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|348551270|ref|XP_003461453.1| PREDICTED: ras-related protein Rab-11B-like [Cavia porcellus]
Length = 278
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 65 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 124
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 125 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 184
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 185 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 242
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 243 DRAAHDESPGNNVVDISVPPTTDGQKPSKLQCCQN 277
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCRN 217
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 172/213 (80%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ K K+ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DCAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 176/211 (83%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDPAA-LPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G ++++ D +A K CC
Sbjct: 182 GDGAQANIAAGTSLSLSKPADENADKGGKCC 212
>gi|395841772|ref|XP_003793707.1| PREDICTED: ras-related protein Rab-11B [Otolemur garnettii]
Length = 249
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 36 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 95
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 96 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 155
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 156 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 213
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 214 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 248
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDY+FKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYIFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 180/217 (82%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA ++AE+E F+ETSALE++NVE AF +L+++YR++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKS 181
Query: 183 LEIGDDP--AALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ A + +GQTI+V + +A K CCS+
Sbjct: 182 ISSDQTTANANIKEGQTIDVAATSESNAKKP--CCSS 216
>gi|49168476|emb|CAG38733.1| RAB11B [Homo sapiens]
Length = 218
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ET+AL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETAALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRSAHDESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|255570960|ref|XP_002526431.1| protein with unknown function [Ricinus communis]
gi|223534211|gb|EEF35926.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/216 (68%), Positives = 178/216 (82%), Gaps = 4/216 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA +AERE F+ETSALE+ NVE AF +L++IYR++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQGYAEREGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
Query: 183 LEIGDD-PAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + PA + +G+ I VG + A K CCS+
Sbjct: 182 LTSEEPAPANIKEGKMIVVGGSE---ANTKKPCCSS 214
>gi|356551598|ref|XP_003544161.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 216
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 173/217 (79%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFKVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVSTEDA + AERE F+ETSALE+ NVE AF +L IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVEKAFQTILFDIYHIISKKA 181
Query: 183 L--EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + + LP+G TINV S CCSN
Sbjct: 182 LAAQEANSSTGLPQGTTINVSNMS--SNAGNRSCCSN 216
>gi|84000297|ref|NP_001033251.1| ras-related protein Rab-11A [Bos taurus]
gi|116255983|sp|Q2TA29.3|RB11A_BOVIN RecName: Full=Ras-related protein Rab-11A; Flags: Precursor
gi|83405346|gb|AAI11144.1| RAB11A, member RAS oncogene family [Bos taurus]
Length = 216
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 169/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+ NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEIYRIVSQKQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 215
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 176/215 (81%), Gaps = 4/215 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + K +
Sbjct: 2 ARRTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL+HLR VSTEDA +FAE+E F+ETSALE+ NVE AF +L +I+R++S+KA
Sbjct: 122 LVGNKSDLKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKA 181
Query: 183 LEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCS 216
L + A + +G+TI V D + K CCS
Sbjct: 182 LASEEAAGAGIKEGKTIVVADPDTNT---KKACCS 213
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 172/213 (80%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ K K+ CC N
Sbjct: 185 SAHGESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 175/215 (81%), Gaps = 10/215 (4%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDPAALPKGQTINVGTKDDVS-----AVKKVGCC 215
GD A TI GT +S A K GCC
Sbjct: 182 GDGAQA-----TIGAGTNISLSKPAEDATAKSGCC 211
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 176/211 (83%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A +FA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD A++ G +I + D SA K CC
Sbjct: 182 GDGAQASIGTGPSIALSKPADDSAEKSGKCC 212
>gi|55925277|ref|NP_001007360.1| ras-related protein Rab-11A [Danio rerio]
gi|55250361|gb|AAH85585.1| RAB11a, member RAS oncogene family [Danio rerio]
gi|126541086|emb|CAM46852.1| novel protein similar to vertebrate Ras family [Danio rerio]
gi|182891330|gb|AAI64310.1| Rab11a protein [Danio rerio]
Length = 215
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 173/211 (81%), Gaps = 1/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEIYRIVSQKQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D P +++ + + K+ CC +
Sbjct: 185 RDNDMSPSNNVVSIQVQPTENK-PKMQCCQS 214
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 177/216 (81%), Gaps = 4/216 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA FAE+E F+ETSALE+ NVE AF +L +IYR++S+K
Sbjct: 122 LIGNKTDLKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKT 181
Query: 183 LEIGDD-PAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L D PA + +G+T+ V D + KK CCS+
Sbjct: 182 LSSDDPAPAGIKEGKTLVVDGSD--TNTKKT-CCSS 214
>gi|37788825|gb|AAP51290.1| Rab11-1a [Limulus polyphemus]
gi|37900937|gb|AAP51291.1| Rab11-1b [Limulus polyphemus]
Length = 217
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/217 (69%), Positives = 175/217 (80%), Gaps = 4/217 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG+ DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGS--KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF ++LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEAAFQQILTEIYRIVSQ 178
Query: 181 KALEIGDDPAALPKGQTINVGT--KDDVSAVKKVGCC 215
K + D P G + + D S +K CC
Sbjct: 179 KQIRNDADNDPSPSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|388506820|gb|AFK41476.1| unknown [Lotus japonicus]
Length = 216
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 177/217 (81%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVY +T+ TFENV+RWL+ELRDH D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYGMTKRQTFENVQRWLRELRDHADANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS+EDA AE+E+ F+ETSALE++NVE AF +L IY+++SRKA
Sbjct: 122 MAGNKSDLNHLRAVSSEDAQNLAEKESLSFLETSALEALNVEKAFQTILFDIYQIISRKA 181
Query: 183 LEIGDDPA--ALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + + +LP G TINV S V+K CCSN
Sbjct: 182 LAAQEAASTTSLPHGTTINVSNLS--SNVEKKTCCSN 216
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 175/217 (80%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +D A AERE F+ETSALE+ N+E AF +LT+IY +VS+KA
Sbjct: 122 MAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LEIGDDPAA--LP-KGQTINVGTKDDVSAVKKVGCCS 216
L + LP +G TINVG D S K GCCS
Sbjct: 182 LAAQEAAVGTTLPGQGTTINVG---DASGNTKRGCCS 215
>gi|148227083|ref|NP_001080132.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus laevis]
gi|27370881|gb|AAH41250.1| Rab11b protein [Xenopus laevis]
Length = 218
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 153/221 (69%), Positives = 177/221 (80%), Gaps = 8/221 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGA--RDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRG VGALLVYD+ +H+T+ENVERWLKELRDH D+NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGVVGALLVYDIAKHLTYENVERWLKELRDHADNNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQ 178
Query: 181 KALEIGDDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
K +I D A P +++ K K+ CC N
Sbjct: 179 K--QIADRSAHDESPGNNVVDISVPPTTDGQKSSKLQCCQN 217
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 174/213 (81%), Gaps = 6/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCC 215
D A P +++ K K+ CC
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 175/217 (80%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +D A AERE F+ETSALE+ N+E AF +LT+IY +VS+KA
Sbjct: 122 MAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LEIGDDPAA--LP-KGQTINVGTKDDVSAVKKVGCCS 216
L + LP +G TINVG D S K GCCS
Sbjct: 182 LAAQEAAVGTILPGQGTTINVG---DASGNTKRGCCS 215
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DS+IVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSDIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 174/213 (81%), Gaps = 6/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCC 215
D A P +++ K K+ CC
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 172/213 (80%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ K K+ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|37788823|gb|AAP51289.1| Rab11-1c [Limulus polyphemus]
Length = 217
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 151/217 (69%), Positives = 175/217 (80%), Gaps = 4/217 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG+ DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGS--KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF ++LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRAVPTDEARAFAEKNILSFIETSALDSTNVEVAFQQILTEIYRIVSQ 178
Query: 181 KALEIGDDPAALPKGQTINVGT--KDDVSAVKKVGCC 215
K + D P G + + D S +K CC
Sbjct: 179 KQIRNDADNDPSPSGDNVKAISIAPTDSSDTRKRQCC 215
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 174/215 (80%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYR ITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|224005202|ref|XP_002296252.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|209586284|gb|ACI64969.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 181/217 (83%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI+ + K +
Sbjct: 2 ATRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TFENVERWLKELRDH ++NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK- 181
LVGNK+DLRHLRAV T++A AF+E+ N F+ETSAL++ V+ AF +LT+IYR++SR+
Sbjct: 122 LVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRN 181
Query: 182 -ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
A E G + L GQTI++ ++ + CC+N
Sbjct: 182 MAAEDGANAPQLSSGQTISLNAENK----PRRNCCNN 214
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS+KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN 181
Query: 186 GDDPAA-LPKGQTINVGTKDDVSAVKKVGCC 215
G+ A + G I++ D A K CC
Sbjct: 182 GESAQANIGAGTNISLSKPADDGAAKGGKCC 212
>gi|47550807|ref|NP_999935.1| RAB11B, member RAS oncogene family, a [Danio rerio]
gi|29294722|gb|AAH48889.1| RAB11B, member RAS oncogene family [Danio rerio]
gi|182890202|gb|AAI65041.1| Rab11b protein [Danio rerio]
Length = 218
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLF+VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--E 184
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQMVDR 184
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
G D + P +++ +K K CC N
Sbjct: 185 PGHDES--PGNNVVDISVPPTTDGLKGNKFQCCQN 217
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 305 bits (781), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKD--DVSAVKKVGCCSN 217
D A P +++ D K+ CC +
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQRPNKLQCCQS 217
>gi|67078856|gb|AAY64452.1| small GTPase Rab11-2 [Gracilaria lemaneiformis]
Length = 214
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 175/212 (82%), Gaps = 1/212 (0%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R+DD+YDYLFKVVLIGD+GVGKSNLLSRFTRNEFSLESKSTIG EFATRSI+C+ KI+KA
Sbjct: 3 RSDDEYDYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGAEFATRSIQCEGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV+RWLKEL+DH D+NIVIMLV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL+HL+AV+T+DA+AFAE F+ETSAL++ VE AF +L++IYR+ S+KALE
Sbjct: 123 GNKSDLQHLKAVTTDDASAFAESNGLSFIETSALDNSTVEEAFRSILSEIYRLGSKKALE 182
Query: 185 IGDDPAALPKG-QTINVGTKDDVSAVKKVGCC 215
G P QTI + D +K CC
Sbjct: 183 KGSTSNFAPNATQTIVINPPADEGKTEKAKCC 214
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/215 (69%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSANVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRSAHDESPGNNVVDISVPPTTDGQKGSKLQCCQN 217
>gi|195997965|ref|XP_002108851.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190589627|gb|EDV29649.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 212
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/216 (70%), Positives = 174/216 (80%), Gaps = 5/216 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG+ DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGS--KDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN+ERWLKELRDH D+NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENIERWLKELRDHADANIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK DLRHLRAV T++A FAE+ F+ETSAL+S NVE AF +LT+IY +VS+
Sbjct: 119 IMLVGNKCDLRHLRAVPTDEAKNFAEKNTLSFIETSALDSTNVETAFQNILTEIYHIVSQ 178
Query: 181 KALEIGDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
K +I D P + Q I VG D KK CC
Sbjct: 179 K--QIKDAPQNSEISSQPIVVGPTVDSDVKKKPQCC 212
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/215 (69%), Positives = 174/215 (80%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+V +K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVPQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ +K K CC N
Sbjct: 183 DRSAHDESPGNNVVDISVPPTTDGLKGSKFQCCQN 217
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/215 (69%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 183 DRSAHDESPGNNVVDISVPPTTDGQKGSKLQCCQN 217
>gi|449441350|ref|XP_004138445.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
gi|449528641|ref|XP_004171312.1| PREDICTED: ras-related protein Rab2BV-like [Cucumis sativus]
Length = 216
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 175/219 (79%), Gaps = 8/219 (3%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNKADL HLRAVS EDA AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 122 MAGNKADLNHLRAVSAEDAQVLAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 L---EIGDDPAALPKGQTINVGTKDDVSA-VKKVGCCSN 217
L E +P LP G TINV ++S K CCSN
Sbjct: 182 LAAQEATSNP-GLPHGTTINVA---NISGNYNKRSCCSN 216
>gi|395513434|ref|XP_003760929.1| PREDICTED: ras-related protein Rab-11B [Sarcophilus harrisii]
Length = 266
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 53 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 112
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 113 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 172
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 173 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 230
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 231 DRSAHDESPGNNVVDISVPPTTDGQKSNKLQCCQN 265
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 174/211 (82%), Gaps = 3/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +K+Q
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYDV++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+I+R+VS KALE
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALES 181
Query: 186 GDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
GD A L + + + D + KK GCC
Sbjct: 182 GDSSANQLGDRKVVEITKTPD--SEKKQGCC 210
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 174/211 (82%), Gaps = 3/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +K+Q
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYDV++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+I+R+VS KALE
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALES 181
Query: 186 GDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
GD A L + + + D + KK GCC
Sbjct: 182 GDSSANQLGDRKVVEITKTPD--SEKKPGCC 210
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G I++ D A K CC
Sbjct: 182 GDGAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|383854058|ref|XP_003702539.1| PREDICTED: ras-related protein Rab-11A-like [Megachile rotundata]
Length = 238
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 174/216 (80%), Gaps = 13/216 (6%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 28 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 87
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 88 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 147
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAER F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 148 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 205
Query: 187 DDPAALPKGQTI---NVGTKDDVSAVKKVG----CC 215
DP P+G TI NV D + G CC
Sbjct: 206 -DP---PEGDTIRPQNVEPIDVKPTMNSEGMRKPCC 237
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 172/210 (81%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G+ + G+ + A +K GCC
Sbjct: 182 GEGSQNVLGGERKVLEISKSADAEQKKGCC 211
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 167/208 (80%), Gaps = 1/208 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV TE+A F+ F+ETSAL++ NVE+AF +LT IYR+VS K+LE D
Sbjct: 126 DLKHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSAD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVG-CC 215
P P G T+ V D SA + G CC
Sbjct: 186 PIKPPTGDTLTVSPSVDNSANAQGGKCC 213
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A +FA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G I++ D A K CC
Sbjct: 182 GDSAQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/211 (72%), Positives = 173/211 (81%), Gaps = 5/211 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGK+NLLSRFTRNEF+LESKSTIGVEFATRS++ D+K VKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ ++ T+ENV RWLKELRDH DSNIV+MLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV TE+A FA F+ETSAL+S NVE AF +LT+IYR+VS KALE
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESS 183
Query: 187 DDPAALPKGQTINVG--TKDDVSAVKKVGCC 215
+D GQTINV T+D+ GCC
Sbjct: 184 NDVIRPTAGQTINVNQPTEDEKQG---GGCC 211
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 174/217 (80%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D +YDYLFK+VL GDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVDHEYDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +D A AERE F+ETSALE+ N+E AF +LT+IY +VS+KA
Sbjct: 122 MAGNKSDLSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LEIGDDPAA--LP-KGQTINVGTKDDVSAVKKVGCCS 216
L + LP +G TINVG D S K GCCS
Sbjct: 182 LAAQEAAVGTTLPGQGTTINVG---DASGNTKRGCCS 215
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 173/213 (81%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE +F +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ + + K+ CC N
Sbjct: 185 AAHEDSPGNNVVDISVTPTMDGQRSVKLQCCQN 217
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T++A AFA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G I++ D A K CC
Sbjct: 182 GDGAQATIGAGTNISLSKAADDEAAKGGKCC 212
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A +FA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G I++ D + K CC
Sbjct: 182 GDGAQATIGAGTNISLSKPADDESAKSGKCC 212
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 173/213 (81%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE +F +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEESFKNILTEIYRIVSQKQMADR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ + + K+ CC N
Sbjct: 185 AAHEDSPGNNVVDISVTPTMDGQRSIKLQCCQN 217
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/212 (70%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS+KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVG-CC 215
GD A + G I + A K G CC
Sbjct: 182 GDSAQATIASGTNITLTPPPSDEAAKGGGKCC 213
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 172/213 (80%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ + K+ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDGQRGSKLQCCQN 217
>gi|167537606|ref|XP_001750471.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771011|gb|EDQ84685.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/212 (70%), Positives = 176/212 (83%), Gaps = 7/212 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
ADD+YD+LFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ ++K +KAQ
Sbjct: 3 ADDEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVENKTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLRAV TE+A FAE + F+ETSALE+ NV++AFT +LT+IY +VS+K +
Sbjct: 123 NKSDLKHLRAVPTEEAQKFAEENDLSFIETSALEAENVDDAFTTILTKIYHIVSQKQV-- 180
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGC-CS 216
AA K T+ TK S K GC CS
Sbjct: 181 ----AAPEKPDTVIDPTKPQNSKEKSGGCGCS 208
>gi|225708490|gb|ACO10091.1| Ras-related protein Rab-11A [Osmerus mordax]
Length = 216
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 170/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVESKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+DH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT IY +VS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D P + + + +A K+ CC N
Sbjct: 185 SDADFSPSSNVVPITVQPTQNASKQGACCQN 215
>gi|340729738|ref|XP_003403153.1| PREDICTED: ras-related protein Rab-11A-like [Bombus terrestris]
gi|350411417|ref|XP_003489343.1| PREDICTED: ras-related protein Rab-11A-like [Bombus impatiens]
Length = 215
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 174/217 (80%), Gaps = 13/217 (5%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAER F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 DDPAALPKGQTI---NVGTKDDVSAVKKVG----CCS 216
DP P+G TI NV D + G CC
Sbjct: 183 -DP---PEGDTIRPQNVEPIDVKPTMNSEGMRKQCCQ 215
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 147/192 (76%), Positives = 167/192 (86%), Gaps = 6/192 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAER F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 DDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/216 (68%), Positives = 175/216 (81%), Gaps = 5/216 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +D A AE+E F+ETSALE+ N+E AF +LT+IY +VS+KA
Sbjct: 122 MAGNKSDLNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LEIGDDPA-ALP-KGQTINVGTKDDVSAVKKVGCCS 216
L + +LP +G TINV D SA K GCCS
Sbjct: 182 LAAQEAAGTSLPGQGTTINVA---DSSANTKRGCCS 214
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/215 (69%), Positives = 174/215 (80%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT SI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKD--DVSAVKKVGCCSN 217
D A P +++ D K+ CC +
Sbjct: 183 DRAAHDESPGNNVVDISVPPTTDGQRPNKLQCCQS 217
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA + F+ETSAL++ NVE AF LT+IYR+VS KA+E
Sbjct: 122 NKSDLRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIEQ 181
Query: 186 GDDPAALPKGQTINVGTKDDVS-AVKKVGCC 215
G+ +G +I +G A KK CC
Sbjct: 182 GEPSQGPGQGTSIPLGPSHPPGDASKKGQCC 212
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/192 (76%), Positives = 167/192 (86%), Gaps = 6/192 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAER F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 DDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/208 (72%), Positives = 170/208 (81%), Gaps = 1/208 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV RWLKELRDH D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAVSTE+A AFA + F+ETSAL++ NVE+AF +LT IYR+VS K+LE D
Sbjct: 126 DLKHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 189 PAALPKGQTINV-GTKDDVSAVKKVGCC 215
G+TI V T DD A + CC
Sbjct: 186 VIKPSGGETILVTPTADDGGAKQGGKCC 213
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 172/210 (81%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A AFA + F+ETSA ++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
GD A G TI + D A + CC
Sbjct: 182 GDAQAIPQGGTTIPLSKTADDGAGQGGKCC 211
>gi|219130377|ref|XP_002185343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403258|gb|EEC43212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/216 (66%), Positives = 179/216 (82%), Gaps = 5/216 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D++YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI+ + K +
Sbjct: 2 ASRVDEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TFENVERWLKELRDH ++NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLRAV T++A AF+E+ N F+ETSAL++ V+ AF +LT+IYR++SR+
Sbjct: 122 LVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRN 181
Query: 183 LEIGDDP-AALPKGQTINVGTKDDVSAVKKVGCCSN 217
++ ++ A + G I++ D KK GCC+
Sbjct: 182 MQAEENANAPMSAGHKISLSQSGD----KKKGCCAQ 213
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 173/211 (81%), Gaps = 5/211 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGK+NLLSRFTRNEF+LESKSTIGVEFATRS++ D+K VK+QI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ ++ T+ENV RWLKELRDH DSNIV+MLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV TE+A FA F+ETSAL+S NVE AF +LT+IYR+VS KALE
Sbjct: 124 KSDLRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESS 183
Query: 187 DDPAALPKGQTINVG--TKDDVSAVKKVGCC 215
+D GQTINV T+D+ GCC
Sbjct: 184 NDVIRPTAGQTINVNQPTEDEKQG---GGCC 211
>gi|41056251|ref|NP_956417.1| RAB11a, member RAS oncogene family, like [Danio rerio]
gi|32766639|gb|AAH55141.1| Zgc:63565 [Danio rerio]
Length = 216
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI + K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+DH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV ++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS++ +
Sbjct: 125 KSDLRHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMSGR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D + P + + + + ++ K+ CC N
Sbjct: 185 GDDSFSPSSKVVPITVQPTQNSGKQSACCQN 215
>gi|184186123|ref|NP_001116984.1| rab11 GTPase homolog SUrab11p [Strongylocentrotus purpuratus]
Length = 217
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D+K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T+++ FAER F+ETSAL+S NVE AF ++LT+IY++VS+K + G
Sbjct: 125 KSDLRHLRAVPTDESKVFAERNTLSFIETSALDSTNVEQAFVQILTEIYKIVSQKNIRDG 184
Query: 187 DDPAALPKG--QTINVGTKDDVSAVKKVGCC 215
+ P + I + + K CC
Sbjct: 185 GNGEDSPSSDVKPITIPPTHGYTEPNKRKCC 215
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/212 (70%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS+KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVG-CC 215
GD A + G I + A K G CC
Sbjct: 182 GDSAQATIGSGTNITLTPPPSDEAAKGGGKCC 213
>gi|427786917|gb|JAA58910.1| Putative ras-related protein rab-11a [Rhipicephalus pulchellus]
Length = 217
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D+K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKEL+DH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--E 184
K DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF ++LT IY +VS+K + E
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSE 184
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+DP+ I + D KK C
Sbjct: 185 GDNDPSPSRDNIPITIAPTDPTDNRKKSCAC 215
>gi|242086541|ref|XP_002439103.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
gi|241944388|gb|EES17533.1| hypothetical protein SORBIDRAFT_09g000540 [Sorghum bicolor]
Length = 220
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/220 (68%), Positives = 177/220 (80%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ + K
Sbjct: 1 MAGRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
I+KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TFEN+ RWLKELRDH DSNI
Sbjct: 61 IIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNIR 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK DLRHLRAV+T+DA +FAE E ++ETSALE+ NVE AF +L IYR +S+
Sbjct: 121 IMLVGNKTDLRHLRAVATDDAQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISK 180
Query: 181 KAL---EIGDDPA-ALPKGQTINVGTKDDVSAVKKVGCCS 216
K + E G A + +G+TINV T D +A KK CCS
Sbjct: 181 KPVASDESGQGAAGGVKEGKTINVATGGDAAAEKKQ-CCS 219
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 303 bits (775), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 180/219 (82%), Gaps = 8/219 (3%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRPEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH D NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA ++AE+E F+ETSALE++NVE AF +L++IYR++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKS 181
Query: 183 LEIGDDPAA----LPKGQTINVGTKDDVSAVKKVGCCSN 217
I D A+ + +GQTI+V + + K CCS+
Sbjct: 182 --ISSDQASANANVKEGQTIDVAASSESNTKKP--CCSS 216
>gi|321469541|gb|EFX80521.1| hypothetical protein DAPPUDRAFT_304112 [Daphnia pulex]
Length = 215
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 170/209 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLR+V T++A AFAER + F+ETSAL+ NVE AF +LT+IYR+VS++ +
Sbjct: 125 KSDLRHLRSVPTDEARAFAERHSLSFIETSALDCTNVETAFHNILTEIYRIVSQRPMHDS 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D + P + + +A K CC
Sbjct: 185 PDEDSPPGNSGPIQISPTEPNAGSKSNCC 213
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/213 (68%), Positives = 173/213 (81%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIAER 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ + + ++ CC N
Sbjct: 185 SAHDESPGNNVVDISVPPTTDSQRGGRLQCCQN 217
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 175/216 (81%), Gaps = 5/216 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN+ RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED A AE+E F+ETSALE++NVE AF +L+ I++++S+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKA 181
Query: 183 LEIGDDPAALP--KGQTINVGTKDDVSAVKKVGCCS 216
L + + P +G TINV D S K GCCS
Sbjct: 182 LAAQEAAGSGPPTQGTTINVA---DSSGNTKKGCCS 214
>gi|391341972|ref|XP_003745298.1| PREDICTED: ras-related protein Rab-11A-like [Metaseiulus
occidentalis]
Length = 218
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 178/217 (82%), Gaps = 7/217 (3%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R +D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K VKA
Sbjct: 3 RTEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+E+VERWLKELRDH D +IVIMLV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYEHVERWLKELRDHADHHIVIMLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL- 183
GNK DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE+AF ++LT IY +VSRK +
Sbjct: 123 GNKNDLRHLRAVPTDEAKAFAEKNNLNFIETSALDSTNVESAFQQILTDIYHIVSRKQMA 182
Query: 184 EIGD-DPAALPKGQTINVG---TKDDVSAVKKVGCCS 216
GD D AAL I + ++ D A KK CC+
Sbjct: 183 NDGDADIAALKNENKITIPPNESRKDPPASKK--CCN 217
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 178/215 (82%), Gaps = 5/215 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + VKAQ
Sbjct: 8 GEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TF+NV RWLKELRDH D+NIVIML+G
Sbjct: 68 IWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL+HLRAV+TEDA ++AE+E F+ETSALE+ NVE AF L +IYR++S+K+L
Sbjct: 128 NKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLST 187
Query: 186 GDDPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
++PAA + +G+TI +G + + K CC++
Sbjct: 188 ANEPAAAANIKEGKTIAIGGSETTNTNKP--CCTS 220
>gi|224101065|ref|XP_002312127.1| predicted protein [Populus trichocarpa]
gi|222851947|gb|EEE89494.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 302 bits (774), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 173/217 (79%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L GNK DL HLR+VS EDA AE+E +ETSALE+ NVE AF +L IY+++S+KA
Sbjct: 122 LAGNKTDLNHLRSVSAEDAQMLAEKECLSCLETSALEASNVEKAFQTILLDIYQIISKKA 181
Query: 183 LEIGD--DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + + LP+G TIN+G + + K CCSN
Sbjct: 182 LAAQEAANSTGLPQGTTINIGNLS--TNINKKACCSN 216
>gi|225449350|ref|XP_002282090.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
Length = 215
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/216 (68%), Positives = 175/216 (81%), Gaps = 5/216 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +DA AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 LEIGDDPAA-LPKGQTINVGTKDDVSA-VKKVGCCS 216
L + + LP G TINVG D+S + K CCS
Sbjct: 182 LAAQEAASINLPHGTTINVG---DLSGNMNKRTCCS 214
>gi|432855561|ref|XP_004068248.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 152/213 (71%), Positives = 173/213 (81%), Gaps = 6/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF VLT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNVLTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQT--INVGTKDDVSAVKKVGCC 215
D A P I+V D K+ CC
Sbjct: 183 DRSAHDESPGNNVVDISVPPTSDGQKGNKIQCC 215
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 149/219 (68%), Positives = 176/219 (80%), Gaps = 4/219 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ + K
Sbjct: 1 MAGRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
I+KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TFEN+ RWLKELRDH DSN
Sbjct: 61 IIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSNTR 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK DLRHLRAV+T+DA +FAE E ++ETSALE+ NVE AF +L IYR VS+
Sbjct: 121 IMLVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAVSK 180
Query: 181 KAL---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K + E+G + +G+TI+V T D +A KK CCS
Sbjct: 181 KPVASDEVGAGQGGVKEGKTIDVATGADAAAHKKQ-CCS 218
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/207 (70%), Positives = 166/207 (80%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
++DYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A AFA F+ETSAL++ NVE+AF +LT IYR+VS K+LE D
Sbjct: 126 DLKHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSAD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P P G +I V D + + CC
Sbjct: 186 PIKPPTGDSITVSPSVDTNQQQGGKCC 212
>gi|380017257|ref|XP_003692576.1| PREDICTED: ras-related protein Rab-11A-like [Apis florea]
Length = 215
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/217 (70%), Positives = 174/217 (80%), Gaps = 13/217 (5%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 DDPAALPKGQTI---NVGTKDDVSAVKKVG----CCS 216
DP P+G TI NV D + G CC
Sbjct: 183 -DP---PEGDTIRPQNVEPIDVKPTMNSEGMRKQCCQ 215
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA F+ETSAL++ NVE AF LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKALDQ 181
Query: 186 GDDPAALPKGQTINVGTKDDVS-AVKKVGCC 215
G+ A +G I + + A KK CC
Sbjct: 182 GEQTAGPSQGSAIPLSSSTPPGDATKKGQCC 212
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 302 bits (773), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 167/208 (80%), Gaps = 2/208 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+++SKSTIGVEFATRSI D K +KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+++H T+ NV+RWLKELRDH DSNIVIMLVGNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
LRHLRAV TE+A AFA N F+ETSA+++ NVE AF +LT IYR+VS KALE D
Sbjct: 127 LRHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSADA 186
Query: 190 AALPKGQTINV-GTKDDVSAVKKVG-CC 215
G TI V T DD S G CC
Sbjct: 187 VGPTSGSTITVTPTSDDASKASGGGKCC 214
>gi|347972127|ref|XP_001238828.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|347972129|ref|XP_001238827.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|347972131|ref|XP_001238825.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|347972133|ref|XP_313857.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|347972135|ref|XP_003436840.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|347972137|ref|XP_003436841.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|347972139|ref|XP_003436842.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|347972141|ref|XP_003436843.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|347972143|ref|XP_003436844.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|347972145|ref|XP_003436845.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|347972147|ref|XP_003436846.1| AGAP004559-PK [Anopheles gambiae str. PEST]
gi|333469183|gb|EAU76889.3| AGAP004559-PA [Anopheles gambiae str. PEST]
gi|333469184|gb|EAU76888.3| AGAP004559-PB [Anopheles gambiae str. PEST]
gi|333469185|gb|EAU76886.3| AGAP004559-PC [Anopheles gambiae str. PEST]
gi|333469186|gb|EAA44610.3| AGAP004559-PD [Anopheles gambiae str. PEST]
gi|333469187|gb|EGK97198.1| AGAP004559-PE [Anopheles gambiae str. PEST]
gi|333469188|gb|EGK97199.1| AGAP004559-PF [Anopheles gambiae str. PEST]
gi|333469189|gb|EGK97200.1| AGAP004559-PG [Anopheles gambiae str. PEST]
gi|333469190|gb|EGK97201.1| AGAP004559-PH [Anopheles gambiae str. PEST]
gi|333469191|gb|EGK97202.1| AGAP004559-PI [Anopheles gambiae str. PEST]
gi|333469192|gb|EGK97203.1| AGAP004559-PJ [Anopheles gambiae str. PEST]
gi|333469193|gb|EGK97204.1| AGAP004559-PK [Anopheles gambiae str. PEST]
Length = 215
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 171/213 (80%), Gaps = 5/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK--QIR 182
Query: 187 DDPAA---LPKGQTINVGTKDDVSAVKKVGCCS 216
D P P + I+V + + + CC
Sbjct: 183 DPPEGSVIRPNLENIDVKPTNPTTDSVRKQCCQ 215
>gi|170035713|ref|XP_001845712.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878018|gb|EDS41401.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 215
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 148/212 (69%), Positives = 171/212 (80%), Gaps = 5/212 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK--QIR 182
Query: 187 DDPAA---LPKGQTINVGTKDDVSAVKKVGCC 215
D P P + I+V + + + CC
Sbjct: 183 DPPEGSVIRPNLENIDVKPTNPTTDSVRKQCC 214
>gi|328778735|ref|XP_623997.2| PREDICTED: ras-related protein Rab-11A [Apis mellifera]
Length = 249
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/192 (76%), Positives = 167/192 (86%), Gaps = 6/192 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 39 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 98
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 99 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 158
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 159 KSDLRHLRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 216
Query: 187 DDPAALPKGQTI 198
DP P+G TI
Sbjct: 217 -DP---PEGDTI 224
>gi|198434696|ref|XP_002131435.1| PREDICTED: similar to Ras-related protein Rab-11B (ORA3) [Ciona
intestinalis]
Length = 217
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 175/212 (82%), Gaps = 1/212 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVNGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AF+E+ F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKAFSEKNGLSFIETSALDSTNVEVAFQNILTEIYLIVSQKQINDS 184
Query: 187 DDPAALPKGQTIN-VGTKDDVSAVKKVGCCSN 217
++ + GQ ++ V + + K+ CC N
Sbjct: 185 NNDEEVKDGQPVDIVISSTNPQPNKQSQCCKN 216
>gi|157122009|ref|XP_001659918.1| rab11 [Aedes aegypti]
gi|94469128|gb|ABF18413.1| RAB family GTPase [Aedes aegypti]
gi|108874607|gb|EAT38832.1| AAEL009317-PA [Aedes aegypti]
Length = 215
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 148/212 (69%), Positives = 171/212 (80%), Gaps = 5/212 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQK--QIR 182
Query: 187 DDPAA---LPKGQTINVGTKDDVSAVKKVGCC 215
D P P + I+V + + + CC
Sbjct: 183 DPPEGSVIRPNLENIDVKPTNPATDSVRKQCC 214
>gi|351728017|ref|NP_001235133.1| uncharacterized protein LOC100499980 [Glycine max]
gi|255628259|gb|ACU14474.1| unknown [Glycine max]
Length = 216
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 177/217 (81%), Gaps = 5/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + V
Sbjct: 2 ARRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGGTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA ++E+E F+ETSALE+ NVE AF +L +IYR++S+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQGYSEKEGLSFIETSALEATNVEKAFQTILAEIYRIISKKS 181
Query: 183 LEIGDDPAA--LPKGQTINVGTKDDVSAVKKVGCCSN 217
L ++PA+ + + TI VG S K CC++
Sbjct: 182 LS-SNEPASANIKESMTITVGGPQ--SNASKPSCCTS 215
>gi|255566524|ref|XP_002524247.1| protein with unknown function [Ricinus communis]
gi|223536524|gb|EEF38171.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 172/217 (79%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS EDA AE+E F+ETSALE+ N+E AF +L IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSAEDARMLAEKEGLSFLETSALEAHNIEKAFQSILLDIYHIISKKA 181
Query: 183 LEIGD--DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + + LP+G TINV V K CC+N
Sbjct: 182 LAAQEAANSTGLPQGTTINVANLS--GNVNKRPCCTN 216
>gi|170596273|ref|XP_001902705.1| Ras-related protein Rab-11B [Brugia malayi]
gi|312076250|ref|XP_003140777.1| rab family protein [Loa loa]
gi|158589464|gb|EDP28446.1| Ras-related protein Rab-11B, putative [Brugia malayi]
gi|307764062|gb|EFO23296.1| Ras-like protein Rab-11B [Loa loa]
gi|402584459|gb|EJW78400.1| rab family protein [Wuchereria bancrofti]
Length = 215
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A A+AE+ F+ETSAL+S NVE AFT +LT+IY+ VS K + G
Sbjct: 125 KSDLRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHVG-G 183
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D+ AA+ + + K CCS+
Sbjct: 184 DNRAAISTPGSNGIVISPTAEPQTKKQCCSS 214
>gi|348504740|ref|XP_003439919.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 148/219 (67%), Positives = 175/219 (79%), Gaps = 4/219 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGA--RDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKSILTEIYRIVSQ 178
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
K + P +++ + + K+ CC +
Sbjct: 179 KQISDRSAHEDSPGNNVVDISVPPTMDGQRGNKLPCCQS 217
>gi|213515102|ref|NP_001133884.1| Ras-related protein Rab-11B [Salmo salar]
gi|209155688|gb|ACI34076.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 175/214 (81%), Gaps = 5/214 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K++KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+I+R+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK-KVGCCSN 217
D A P +++ K K+ CC +
Sbjct: 183 DRSAHDESPGNNVVDISVPPTTDGQKNKLPCCQS 216
>gi|62858189|ref|NP_001016481.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148234494|ref|NP_001087765.1| RAB11A, member RAS oncogene family [Xenopus laevis]
gi|51895840|gb|AAH81187.1| MGC84419 protein [Xenopus laevis]
gi|89272900|emb|CAJ83200.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|138519937|gb|AAI35894.1| RAB11A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 168/211 (79%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+ IVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNKIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQTQMSDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + K+ CC N
Sbjct: 185 RENDMSPSNNVVPIHVPPTTENKPKMQCCQN 215
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/213 (68%), Positives = 172/213 (80%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ + + K+ CC +
Sbjct: 185 SGHEESPGNNVVDISLPPTTDSQRGGKLPCCQS 217
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 175/217 (80%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A++ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ D K V
Sbjct: 2 AHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVI+
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIL 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAV+ ED A AERE+ F+ETSALE+ NVE AF +LT+IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKA 181
Query: 183 LEIGDDP--AALP-KGQTINVGTKDDVSAVKKVGCCS 216
L + + LP +G TINV D S K CCS
Sbjct: 182 LAAQEAAGNSTLPGQGTTINVA---DTSGNTKRSCCS 215
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 176/217 (81%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +D A +E+E F+ETSALE+ N+E AF +LT+IY +VS+KA
Sbjct: 122 MAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LEIGDDP--AALP-KGQTINVGTKDDVSAVKKVGCCS 216
L + A++P +G TINV D S K GCCS
Sbjct: 182 LAAQEATAGASVPGQGTTINVA---DTSGNTKKGCCS 215
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 173/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T++A FA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G I++ D A K CC
Sbjct: 182 GDGAQATIGAGTNISLSKAADDEASKGGKCC 212
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/207 (70%), Positives = 166/207 (80%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
++DYLFKVVLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATRSI D K +KAQIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+++H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV TE+A AFA F+ETSAL++ NVE+AF +LT IYR+VS K+LE DD
Sbjct: 126 DLKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSDD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P G TI V D A CC
Sbjct: 186 PIKPTSGDTITVSHSVDTPANAGGKCC 212
>gi|410921188|ref|XP_003974065.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 173/213 (81%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE-- 184
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G D + I++ D K+ CC +
Sbjct: 185 SGHDESPGNNVVDISLPPTTDSQRGGKLPCCQS 217
>gi|442750113|gb|JAA67216.1| Putative ras-related protein rab-11a [Ixodes ricinus]
Length = 217
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D+K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAV ALLVYD+ +H+T+ENVERWLKEL+DH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVXALLVYDIAKHLTYENVERWLKELKDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--E 184
K DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF ++LT IY +VS+K + E
Sbjct: 125 KNDLRHLRAVPTDEAKAFAEKNKLSFIETSALDSTNVEAAFHQILTDIYHIVSQKQIRSE 184
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+DP+ I + D + KK C
Sbjct: 185 GDNDPSPSRDNIPITIAPTDPTDSRKKSCAC 215
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDPAA-LPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G I++ D + K CC
Sbjct: 182 GDGAQANIGAGTNISLSKPADDGSAKGGKCC 212
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 174/210 (82%), Gaps = 2/210 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDN 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G+ + + + +K D + +K GCC
Sbjct: 182 GEGGQQVLDRRPVIDPSKQD--SEQKPGCC 209
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/213 (70%), Positives = 176/213 (82%), Gaps = 5/213 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS+KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDQ 181
Query: 186 GDDPAALPKG---QTINVGTKDDVSAVKKVGCC 215
G + A P G +T+ + D A K+ CC
Sbjct: 182 G-ESAQNPIGGERRTLEITNSADTEA-KQGKCC 212
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/209 (71%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV RWLKELRDH D NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A AF+ N F+ETSAL++ NVE+AF +LT IYR+VS KAL+ D
Sbjct: 126 DLKHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDSSGD 185
Query: 189 PAALPKGQTINVG-TKDDVSAVKKVGCCS 216
G+TI V T DD A + CC+
Sbjct: 186 VIKPAGGETILVAPTADDGGAKQGSKCCA 214
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 172/213 (80%), Gaps = 6/213 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-- 183
NK+DLRHLRAV TEDA FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL
Sbjct: 122 NKSDLRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 184 -EIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
E G +P + Q + + D K GCC
Sbjct: 182 GEGGQNPLG-ERRQVVEISKTQDTET--KQGCC 211
>gi|432855565|ref|XP_004068250.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/215 (68%), Positives = 175/215 (81%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS++ +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQR--QIA 182
Query: 187 DDPAA--LPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ + + K+ CC +
Sbjct: 183 DRSAHDDSPGNNVVDISVPPTMDGQRGNKLPCCQS 217
>gi|397569796|gb|EJK46971.1| hypothetical protein THAOC_34340 [Thalassiosira oceanica]
Length = 214
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 180/217 (82%), Gaps = 7/217 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG+ RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI+ + K
Sbjct: 1 MGS-RADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H TFENVERWLKELRDH ++NIV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK+DLRHLRAV T++A AF+E+ N F+ETSAL++ V+ +F +LT+IYR++SR
Sbjct: 120 VMLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTSFQRILTEIYRLMSR 179
Query: 181 K--ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ A E G + L GQTI++ + + CC
Sbjct: 180 RNMAAEEGGNQPQLSTGQTISLNNDNK----PRRNCC 212
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 174/210 (82%), Gaps = 2/210 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDN 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G+ + + + +K D + +K GCC
Sbjct: 182 GEGGQQVLDRRPVIDPSKQD--SEQKQGCC 209
>gi|209736178|gb|ACI68958.1| Ras-related protein Rab-11B [Salmo salar]
gi|221220258|gb|ACM08790.1| Ras-related protein Rab-11B [Salmo salar]
Length = 217
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/212 (69%), Positives = 173/212 (81%), Gaps = 5/212 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK-KVGCC 215
D A P +++ K K+ CC
Sbjct: 183 DRSAHDESPGNNVVDISVPPTTDGQKNKLPCC 214
>gi|431900156|gb|ELK08070.1| Ras-related protein Rab-11B [Pteropus alecto]
Length = 226
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/223 (68%), Positives = 175/223 (78%), Gaps = 14/223 (6%)
Query: 7 DDDYDYLFK--------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCD 58
DD+YDYLFK VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D
Sbjct: 5 DDEYDYLFKGTAGEAQTVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVD 64
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN 118
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSN
Sbjct: 65 GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN 124
Query: 119 IVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV 178
IVIMLVGNK+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+V
Sbjct: 125 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIV 184
Query: 179 SRKALEIGDDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
S+K +I D A P +++ K K+ CC N
Sbjct: 185 SQK--QIADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 225
>gi|356501105|ref|XP_003519369.1| PREDICTED: ras-related protein Rab2BV-like [Glycine max]
Length = 217
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 173/217 (79%), Gaps = 3/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A++ D +YDYLFKVVLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AFKVDHEYDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVSTEDA + AERE F+ETSALE+ NV+ AF +L IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSTEDAQSLAEREGLSFLETSALEAYNVDKAFQTILFDIYHIISKKA 181
Query: 183 L--EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + LP+G TINV +A CCSN
Sbjct: 182 LAAQEATSSTGLPQGTTINVSNMAG-NAGGNRSCCSN 217
>gi|332375364|gb|AEE62823.1| unknown [Dendroctonus ponderosae]
Length = 213
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 171/210 (81%), Gaps = 3/210 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A A+AER F+ETSAL+S NVE AFT +LT+IYR VS + +
Sbjct: 125 KSDLRHLRAVPTDEAKAYAERNQLSFIETSALDSTNVEAAFTNILTEIYRSVSTRQVP-P 183
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
D + I + + +D A K CC+
Sbjct: 184 DRIVPIHSQNNITLSSTND--AQNKKQCCT 211
>gi|46561764|gb|AAT01087.1| putative rab11 [Homalodisca vitripennis]
Length = 215
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/192 (76%), Positives = 166/192 (86%), Gaps = 6/192 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARTFAERNGLSFIETSALDSTNVETAFHNILTEIYRIVSQKQIR-- 182
Query: 187 DDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|195452940|ref|XP_002073567.1| GK14185 [Drosophila willistoni]
gi|194169652|gb|EDW84553.1| GK14185 [Drosophila willistoni]
Length = 214
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 152/222 (68%), Positives = 175/222 (78%), Gaps = 14/222 (6%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA +D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K
Sbjct: 1 MGA--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRAVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
Query: 181 KALEIGDDPAALPKGQTIN------VGTKDDVSAVKKVGCCS 216
K + DP P+G I + K V+A + CC
Sbjct: 179 KQIR---DP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 214
>gi|224129448|ref|XP_002328719.1| predicted protein [Populus trichocarpa]
gi|118484335|gb|ABK94045.1| unknown [Populus trichocarpa]
gi|222839017|gb|EEE77368.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 181/216 (83%), Gaps = 4/216 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ TFENV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLRAV+TEDA ++AE+E F+ETSALE+ NVE AF +L++IYR+VS+K+
Sbjct: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLAFIETSALEATNVEKAFQTILSEIYRIVSKKS 181
Query: 183 LEIGDD-PAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + PA++ G+TI VG + + K CCS+
Sbjct: 182 LSSEESAPASIKDGKTIVVGGPEPDT---KKTCCSS 214
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 170/217 (78%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ D K V
Sbjct: 2 AHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGA LVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAV ED A AE+E F+ETSALE+ N+E AF +LT+IY ++S+K
Sbjct: 122 MAGNKSDLNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKT 181
Query: 183 L---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
L E + +G TINV D S K GCCS
Sbjct: 182 LAAQEAAANSTVPGQGTTINVA---DASGNTKKGCCS 215
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/217 (67%), Positives = 176/217 (81%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D +YDYLFK++LIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVDHEYDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +D A AE++ F+ETSALE+ N+E AF +LT+IY +VS+KA
Sbjct: 122 MAGNKSDLNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKA 181
Query: 183 LEIGDDP--AALP-KGQTINVGTKDDVSAVKKVGCCS 216
L + A++P +G TINV D S K GCCS
Sbjct: 182 LAAQEATAGASVPGQGTTINVA---DTSGNTKKGCCS 215
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 176/213 (82%), Gaps = 1/213 (0%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R+DD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S++ + K +KA
Sbjct: 3 RSDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++ +F VE+WLKELRDH DSNIVIMLV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL+HLRAVSTE+ FAE+ + F+ETSAL++ NVE AFT++LT+IYR+V +KAL
Sbjct: 123 GNKSDLKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALT 182
Query: 185 IGDDPAALPK-GQTINVGTKDDVSAVKKVGCCS 216
+P+ P G+++ V + K CCS
Sbjct: 183 NEKNPSFKPALGESVVVRDPAEDKGTHKKKCCS 215
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 172/217 (79%), Gaps = 4/217 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF L+SKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L GNK+DL HLR+VS EDA AE+E F+ETSALE+ NVE AF +L IY+++S+KA
Sbjct: 122 LAGNKSDLNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKA 181
Query: 183 LEIGD--DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L + + LP+G TI + S + K CCSN
Sbjct: 182 LTAQEAANSTGLPQGTTITIANLS--SNINKRACCSN 216
>gi|212723022|ref|NP_001131943.1| Ras protein Rab11A [Zea mays]
gi|194692980|gb|ACF80574.1| unknown [Zea mays]
gi|195641328|gb|ACG40132.1| ras-related protein Rab11A [Zea mays]
gi|414589227|tpg|DAA39798.1| TPA: Ras protein Rab11A [Zea mays]
Length = 223
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 177/216 (81%), Gaps = 5/216 (2%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+ D+YDYLFKVVLIGDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+++ ++KI+KA
Sbjct: 10 QGGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTLQVENKIIKA 69
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ +TFENV+RWLKELRDH DSNIV+ML+
Sbjct: 70 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLI 129
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL- 183
GNK DLRHLR+V+ EDA +FAE E FF+ETSAL++ NVE AF VL +IYR++S+K L
Sbjct: 130 GNKTDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFHTVLAEIYRIISKKPLS 189
Query: 184 --EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
E G L +GQ+I V + + + CCS+
Sbjct: 190 SEESGLGSGNLREGQSIQVSATNSGALTSR--CCSS 223
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 176/217 (81%), Gaps = 5/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN++RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED A AE+E F+ETSALE++NVE AF +L I++++S+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKA 181
Query: 183 LEIGDDPAALP--KGQTINVGTKDDVSAVKKVGCCSN 217
L + + P +G TINV D + K GCCS+
Sbjct: 182 LAAQEAAGSGPPTQGTTINV---TDSAVNTKRGCCSS 215
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 170/210 (80%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G+ + + A +K GCC
Sbjct: 182 GEGSGPVLGNDRKVLEISKSADAEQKKGCC 211
>gi|156551916|ref|XP_001607057.1| PREDICTED: ras-related protein Rab-11A-like [Nasonia vitripennis]
Length = 215
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/217 (69%), Positives = 173/217 (79%), Gaps = 13/217 (5%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A FAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEAKTFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 182
Query: 187 DDPAALPKGQTI---NVGTKDDVSAVKKVG----CCS 216
DP P+G TI NV D + G CC
Sbjct: 183 -DP---PEGDTIRPQNVEPIDVKPTMSSEGMRKQCCQ 215
>gi|332373948|gb|AEE62115.1| unknown [Dendroctonus ponderosae]
Length = 215
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/192 (76%), Positives = 167/192 (86%), Gaps = 6/192 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV TE+A AFAER F+ETSAL+S NV+ AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIR-- 182
Query: 187 DDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 -DP---PEGDTI 190
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 174/211 (82%), Gaps = 2/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAVST+DA FA F+ETSAL++ NVE AF + L +IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALDQ 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVG-CC 215
G+ +G I +G ++ A KK G CC
Sbjct: 182 GEPSQGPGQGSAIPLGPS-NMPADKKSGQCC 211
>gi|348504744|ref|XP_003439921.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
Length = 218
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 173/213 (81%), Gaps = 6/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCC 215
D A P +++ K K+ CC
Sbjct: 183 DRSAHDESPGNNVVDISVPPTTDGQKGNKLQCC 215
>gi|290462207|gb|ADD24151.1| Ras-related protein Rab-11A [Lepeophtheirus salmonis]
Length = 217
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/213 (70%), Positives = 176/213 (82%), Gaps = 4/213 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K VKAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENV+RWL+ELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVDRWLRELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-EI 185
K DLRHLRAV T++A FAE+ N F+ETSAL+S NVE AF +LT+IYR+VS++ L E
Sbjct: 125 KCDLRHLRAVPTDEAKHFAEQNNLSFIETSALDSTNVETAFHNILTEIYRIVSQRQLREP 184
Query: 186 GDDPAAL-PKG-QTINVGTKDDVSAVKKVGCCS 216
+D + P +TINV V++ CC+
Sbjct: 185 AEDEVTIRPNNVETINVKPTVSTENVRR-QCCN 216
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 176/217 (81%), Gaps = 14/217 (6%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDG 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVK-------KVGCC 215
GD GQT+ +G + D+ + K GCC
Sbjct: 182 GD------AGQTV-LGDRRDMVRIDESEDPKTKQGCC 211
>gi|89258423|gb|ABD65435.1| Rab11 [Suberites domuncula]
Length = 217
Score = 300 bits (767), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 170/211 (80%), Gaps = 3/211 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIM VGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMAVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DLRHLRAV TE+A A++E+ F+ETSAL+S NVE AF +LT+IY +VS+ +
Sbjct: 125 KCDLRHLRAVPTEEAKAYSEKNGLSFIETSALDSTNVETAFQNILTEIYHIVSQSST-AN 183
Query: 187 DDPAALPKGQ--TINVGTKDDVSAVKKVGCC 215
D P+A G+ TI D A K CC
Sbjct: 184 DVPSAPELGERTTIKPTEGDQQQASGKRQCC 214
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 169/210 (80%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + V K GCC
Sbjct: 182 GDSGQAGLGDRRPVVDINPSQDPETKQGCC 211
>gi|432910562|ref|XP_004078415.1| PREDICTED: ras-related protein Rab-11A-like [Oryzias latipes]
Length = 216
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 169/211 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+DH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT IY +VS++ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D P + + + ++ K CC N
Sbjct: 185 TDSDFSPASNVVPISVEPTQTSSSKGSCCQN 215
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 171/216 (79%), Gaps = 6/216 (2%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K VK
Sbjct: 3 HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMM 122
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
GNK+DL HLRAV +D AERE F+ETSALE+ N+E AF +LT+IY +VS+KAL
Sbjct: 123 AGNKSDLSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL 182
Query: 184 ---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
E G +G TINVG D S K GCCS
Sbjct: 183 AAQEAGVGTTLPGQGTTINVG---DASGNTKRGCCS 215
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 176/217 (81%), Gaps = 5/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + + +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN++RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED A AE+E F+ETSALE++NVE AF +L I++++S+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKA 181
Query: 183 LEIGDDPAALP--KGQTINVGTKDDVSAVKKVGCCSN 217
L + + P +G TINV D + K GCCS+
Sbjct: 182 LAAQEAAGSGPPTQGTTINV---TDSAVNTKRGCCSS 215
>gi|147802502|emb|CAN73117.1| hypothetical protein VITISV_002485 [Vitis vinifera]
Length = 215
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 174/216 (80%), Gaps = 5/216 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNE LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEXCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +DA AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 LEIGDDPAA-LPKGQTINVGTKDDVSA-VKKVGCCS 216
L + + LP G TINVG D+S + K CCS
Sbjct: 182 LAAQEAASINLPHGTTINVG---DLSGNMNKRTCCS 214
>gi|17137216|ref|NP_477170.1| Rab11, isoform B [Drosophila melanogaster]
gi|19549675|ref|NP_599137.1| Rab11, isoform A [Drosophila melanogaster]
gi|125776219|ref|XP_001359206.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|194899580|ref|XP_001979337.1| GG24366 [Drosophila erecta]
gi|195037917|ref|XP_001990407.1| GH18257 [Drosophila grimshawi]
gi|195107587|ref|XP_001998390.1| GI23656 [Drosophila mojavensis]
gi|195152035|ref|XP_002016944.1| GL21786 [Drosophila persimilis]
gi|195355578|ref|XP_002044268.1| GM15065 [Drosophila sechellia]
gi|195388968|ref|XP_002053150.1| GJ23499 [Drosophila virilis]
gi|2313039|dbj|BAA21708.1| rab11 [Drosophila melanogaster]
gi|6517204|dbj|BAA87880.1| Drab11 [Drosophila melanogaster]
gi|7300703|gb|AAF55850.1| Rab11, isoform A [Drosophila melanogaster]
gi|17944208|gb|AAL47999.1| GM06568p [Drosophila melanogaster]
gi|21064359|gb|AAM29409.1| RE11886p [Drosophila melanogaster]
gi|23171847|gb|AAN13849.1| Rab11, isoform B [Drosophila melanogaster]
gi|54638949|gb|EAL28351.1| GA19116 [Drosophila pseudoobscura pseudoobscura]
gi|190651040|gb|EDV48295.1| GG24366 [Drosophila erecta]
gi|193894603|gb|EDV93469.1| GH18257 [Drosophila grimshawi]
gi|193914984|gb|EDW13851.1| GI23656 [Drosophila mojavensis]
gi|194112001|gb|EDW34044.1| GL21786 [Drosophila persimilis]
gi|194129569|gb|EDW51612.1| GM15065 [Drosophila sechellia]
gi|194151236|gb|EDW66670.1| GJ23499 [Drosophila virilis]
gi|220943114|gb|ACL84100.1| CG5771-PA [synthetic construct]
gi|220953258|gb|ACL89172.1| Rab11-PA [synthetic construct]
Length = 214
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 151/222 (68%), Positives = 175/222 (78%), Gaps = 14/222 (6%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA +D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K
Sbjct: 1 MGA--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLR+V T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
Query: 181 KALEIGDDPAALPKGQTIN------VGTKDDVSAVKKVGCCS 216
K + DP P+G I + K V+A + CC
Sbjct: 179 KQIR---DP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 214
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 167/208 (80%), Gaps = 1/208 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV RWLKELRDH D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAVST++A FA F+ETSAL++ NVE+AF +LT IYR+VS K+LE D
Sbjct: 126 DLKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 189 PAALPKGQTINVG-TKDDVSAVKKVGCC 215
G+TI V T DD A CC
Sbjct: 186 VIKPSGGETILVAPTADDGGAKSSSKCC 213
>gi|149689184|gb|ABR27957.1| putative rab11 [Triatoma infestans]
Length = 215
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 153/218 (70%), Positives = 175/218 (80%), Gaps = 15/218 (6%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIVVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS K +
Sbjct: 125 KSDLRHLRAVPTDEAKNFAERNALSFIETSALDSTNVETAFQNILTEIYRIVSXKQIR-- 182
Query: 187 DDPAALPKGQTI---NVGTKD-----DVSAVKKVGCCS 216
DP P+G+TI NV D + +V+K CC
Sbjct: 183 -DP---PEGETIRPQNVEAIDVKPTVNTESVRK-QCCQ 215
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 146/211 (69%), Positives = 172/211 (81%), Gaps = 3/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +K+Q
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+I+R+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDS 181
Query: 186 GDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
GD L + + + D + K GCC
Sbjct: 182 GDSAQNPLSDRKVVEITKTQDPES--KQGCC 210
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 149/208 (71%), Positives = 167/208 (80%), Gaps = 1/208 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ENV RWLKELRDH D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAVST++A FA F+ETSAL++ NVE+AF +LT IYR+VS K+LE D
Sbjct: 126 DLKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 189 PAALPKGQTINVG-TKDDVSAVKKVGCC 215
G+TI V T DD A CC
Sbjct: 186 VIKPSGGETILVAPTADDGGAKSGSKCC 213
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 143/210 (68%), Positives = 170/210 (80%), Gaps = 1/210 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
++++YD+LFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQ
Sbjct: 3 SEEEYDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H ++ENV RWLKELRDH DSNIVIMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLRAV E+AT FAE + F+ETSAL+S NVE AF +LT IYR+VS+++++
Sbjct: 123 NKSDLKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVSQRSIKA 182
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G+ P TI VG D + G C
Sbjct: 183 GESDKTTP-SDTIVVGPTDSSTTETSKGGC 211
>gi|60460508|gb|AAX20384.1| small GTPase [Gracilariopsis lemaneiformis]
gi|65306620|gb|AAY41883.1| small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 215
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 144/206 (69%), Positives = 171/206 (83%), Gaps = 1/206 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFKVVLIGD+GVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+C+ KI+KAQIWDTA
Sbjct: 10 DYLFKVVLIGDAGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGAVGALLVYD+T+ +F+NV+RWLKEL+DH D+NIVIMLVGNK+DL
Sbjct: 70 GQERYRAITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
+HL+AV+T+DA+AFAE F+ETSAL++ NVE AF +L++IYR+ S+KALE G
Sbjct: 130 QHLKAVTTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSN 189
Query: 191 ALPKG-QTINVGTKDDVSAVKKVGCC 215
P QTI + D +K CC
Sbjct: 190 FAPNATQTIVINPPADEGKTEKAKCC 215
>gi|221048037|gb|ACL98126.1| RAB11B protein [Epinephelus coioides]
Length = 218
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEGNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVK--KVGCC 215
P +++ + K+ CC
Sbjct: 185 SAHDESPGNNVVDISLPPTTEGQRGNKLPCC 215
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFK VLIGDSGVGKSNLL RFTRNEF++ESKSTIGVEFATR+I D+K +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RWLKELRDH DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL HLRAVSTE+A AFA N F+ETSA+++ NVE AF VLT+I+R+VS +A+E G
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAMEGG 183
Query: 187 DDPAALPKGQTINVG-TKDDVSAVKKVG-CC 215
D+ A GQT+N+ T D K G CC
Sbjct: 184 DEGAHPSAGQTLNIAPTIGDSGKSKSSGQCC 214
>gi|50980824|gb|AAT91258.1| GTPase [Paxillus involutus]
Length = 211
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 146/207 (70%), Positives = 166/207 (80%), Gaps = 2/207 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV TE+A F+ F+ETSAL++ NVE+AF +LT +YR+VS K+LE D
Sbjct: 126 DLKHLRAVPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYRIVSTKSLEQSSD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P P TI V D SA K G C
Sbjct: 186 PIRAPTSDTIPVAI--DSSAPTKNGSC 210
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 169/210 (80%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L++KSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + V K GCC
Sbjct: 182 GDSGQAGLGDRRPVVDINPSQDPETKQGCC 211
>gi|296086163|emb|CBI31604.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 298 bits (763), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 142/200 (71%), Positives = 167/200 (83%), Gaps = 1/200 (0%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY+ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AYKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLRAVS +DA AE+E F+ETSALE++NVE AF +L IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRAVSGDDAQILAEKEGLSFLETSALEALNVEKAFQTILLDIYHIISKKA 181
Query: 183 LEIGDDPAA-LPKGQTINVG 201
L + + LP G TINVG
Sbjct: 182 LAAQEAASINLPHGTTINVG 201
>gi|119497347|ref|XP_001265432.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
gi|119413594|gb|EAW23535.1| Ras GTPase Rab11, putative [Neosartorya fischeri NRRL 181]
Length = 224
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/225 (66%), Positives = 175/225 (77%), Gaps = 17/225 (7%)
Query: 6 ADDDYDYLFK--------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFA 51
A+D+YD+LFK +VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFA
Sbjct: 2 ANDEYDFLFKGNVATFPAQSPQVSLVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFA 61
Query: 52 TRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
TRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKEL
Sbjct: 62 TRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKEL 121
Query: 112 RDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVL 171
RDH DSNIVIMLVGNK+DLRHLRAV T++A FA N F+ETSAL++ NVE AF +L
Sbjct: 122 RDHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNIL 181
Query: 172 TQIYRVVSRKALEIGDD-PAALPKGQTINVGTKDDVSAVKKVGCC 215
T+IYR+VS KAL+ GD A L G+TI V D + K GCC
Sbjct: 182 TEIYRIVSSKALDNGDSGQAPLSSGRTIEVSKAPDTES--KQGCC 224
>gi|440804360|gb|ELR25237.1| RAB11B protein, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 171/210 (81%), Gaps = 2/210 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFATRSI+CD K +KAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATRSIKCDSKTIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ VT+ENVERWL ELRDH DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDISKAVTYENVERWLNELRDHADSNIVIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS-RKALEI 185
K+DLRHLRAV TE A A AE+ F+ETSAL+S NVE AF ++LT+I+ +V+ K LE
Sbjct: 124 KSDLRHLRAVPTEQAAALAEKHGLSFIETSALDSTNVELAFQKILTEIFHIVNGGKQLET 183
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D ++ G+T V D + K CC
Sbjct: 184 KKDSQSV-DGETEVVQVGGDPAPKKAGACC 212
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 169/210 (80%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ TF NV+RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T+DA AFA F+ETSAL++ NVE AF + LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDQ 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
A +G +I + KK CC
Sbjct: 182 DTSGPAPGQGTSIPLSASTPAGEAKKGQCC 211
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/207 (70%), Positives = 169/207 (81%), Gaps = 1/207 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV+T++A AF+ F+ETSAL++ NVE+AF +LT IYR+VS K+LE +
Sbjct: 126 DLKHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSTN 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
PK + I+VG D +A + CC
Sbjct: 186 NIEPPK-EGISVGPSLDSTATQGSKCC 211
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 172/215 (80%), Gaps = 4/215 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 ANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLR+V+ ED + AE+E F+ETSALE+ N+E AF +L++IY ++S+KA
Sbjct: 122 MAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKA 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
L + LP +G IN+ D SA + GCCS
Sbjct: 182 LAAQEAAGNLPGQGTAINI---SDSSATNRKGCCS 213
>gi|410921192|ref|XP_003974067.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
gi|47216650|emb|CAG04848.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 172/213 (80%), Gaps = 6/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A FAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVPTDEARVFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIA 182
Query: 187 DDPA--ALPKGQTINVGTKDDVSAVK--KVGCC 215
D A P +++ K K+ CC
Sbjct: 183 DRSAHDESPGNNVVDISVPPTTDGQKGNKLQCC 215
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQIWD
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+T+H ++ NV RWLKELRDH D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A AF+ F+ETSAL++ NVE+AF LT IYR+VSR+ LE D
Sbjct: 126 DLKHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTLEQNAD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVG-CC 215
P P G T + D SA G CC
Sbjct: 186 PIKPPTGDTRTINPSVDNSASAPSGKCC 213
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 180/218 (82%), Gaps = 6/218 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ D K V
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF+NV+RWL+ELRDH D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED+ AF+E+E+ F+ETSALE++NVE AF VL++I+++VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 LEIGDDPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
L + +A +G TINV + S K CCS+
Sbjct: 182 LAAQESASANGRSMQGTTINVA---EPSTNTKGSCCSS 216
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 141/207 (68%), Positives = 170/207 (82%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFK+VLIGDSGVGKSNLLSRFTRNEFS ++KSTIGVEFATRSI + KI+KAQIWD
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+++ ++ENV+RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A AFA F+ETSAL++ NV++AF LT IYR+VS + LE +
Sbjct: 126 DLKHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTLESSAN 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P P G T++VG D +A + GCC
Sbjct: 186 PIEAPSGNTVSVGPSLDSNAKQSNGCC 212
>gi|392596215|gb|EIW85538.1| GTPase [Coniophora puteana RWD-64-598 SS2]
Length = 211
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 162/207 (78%), Gaps = 1/207 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATR+I D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYANVTRWLKELRDHADANIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV TE+A FA F+ETSAL++ NVE+AF +LT IYR+VS K LE D
Sbjct: 126 DLKHLRAVPTEEAKTFATENELSFIETSALDASNVESAFQTILTDIYRIVSSKTLEQSSD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P P TI V D + CC
Sbjct: 186 PIKAPTSDTIPVAI-DSAAPASGSKCC 211
>gi|115456519|ref|NP_001051860.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|41469625|gb|AAS07348.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108712033|gb|ABF99828.1| Ras-related protein Rab11C, putative, expressed [Oryza sativa
Japonica Group]
gi|113550331|dbj|BAF13774.1| Os03g0843100 [Oryza sativa Japonica Group]
gi|215737493|dbj|BAG96623.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737626|dbj|BAG96756.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767052|dbj|BAG99280.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194080|gb|EEC76507.1| hypothetical protein OsI_14277 [Oryza sativa Indica Group]
gi|222626146|gb|EEE60278.1| hypothetical protein OsJ_13326 [Oryza sativa Japonica Group]
Length = 223
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 176/212 (83%), Gaps = 5/212 (2%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D+YDYLFK+VLIGDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+ + KIVKAQIW
Sbjct: 13 DEYDYLFKIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQVEGKIVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TFENV+RWLKELRDH DSNIV+ML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK---ALE 184
DL+HLR+VS EDAT+FAERE F+ETSAL++ NV+ AF VLT+IYR++S+K A E
Sbjct: 133 IDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIYRIISKKALAADE 192
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
G A+ +GQ+I V D S + CCS
Sbjct: 193 AGAGAGAVREGQSIQVSATDSSSFTSR--CCS 222
>gi|294463532|gb|ADE77295.1| unknown [Picea sitchensis]
Length = 214
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 176/214 (82%), Gaps = 3/214 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A + DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I+ D K +
Sbjct: 2 ARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T++ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL H+RAV +DA FAE+E FMETSALES NVE +F +LT+IY++V RK+
Sbjct: 122 LVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKS 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCC 215
L + +A P +G INV + ++ KK CC
Sbjct: 182 LAAEEAASAGPSQGTPINVSDAETIA--KKRSCC 213
>gi|213511282|ref|NP_001134031.1| Ras-related protein Rab-11A [Salmo salar]
gi|209156222|gb|ACI34343.1| Ras-related protein Rab-11A [Salmo salar]
Length = 216
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 166/211 (78%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI + K VKAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+DH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV ++A A AE+ F+ETSAL+S NVE AF +LT IY +VS++ +
Sbjct: 125 KSDLRHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMTGR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D P + + + +A K CC N
Sbjct: 185 SDTDFSPNSNVVPITVQPTQNAAKSSACCQN 215
>gi|387017948|gb|AFJ51092.1| RAB11a, member RAS oncogene family, like [Crotalus adamanteus]
Length = 217
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 170/212 (80%), Gaps = 1/212 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI+ D+K VKAQI
Sbjct: 5 DDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDNKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +++T+EN E WLKEL+DH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAECWLKELQDHADANIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A +FAE+ F+E SAL+S NVE AF +LT+IYR+VS++ L G
Sbjct: 125 KSDLRHLRAVPTDEAKSFAEKNGLSFIEASALDSTNVEAAFHNILTEIYRIVSQRQLAGG 184
Query: 187 DDPAALPKGQTIN-VGTKDDVSAVKKVGCCSN 217
+ G TI + ++ CC N
Sbjct: 185 QPESEFSHGTTIEPIKVLPTQQGARETPCCQN 216
>gi|348527514|ref|XP_003451264.1| PREDICTED: ras-related protein Rab-11A-like [Oreochromis niloticus]
Length = 216
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/209 (67%), Positives = 168/209 (80%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+DH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT IY +VS++ +
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMSGR 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D P + + + ++ K CC
Sbjct: 185 SDSDFSPASNVVPITVEPTQNSSNKGACC 213
>gi|91076508|ref|XP_973251.1| PREDICTED: similar to putative rab11 [Tribolium castaneum]
gi|270002909|gb|EEZ99356.1| Rab-protein 11 [Tribolium castaneum]
Length = 215
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/218 (68%), Positives = 175/218 (80%), Gaps = 15/218 (6%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS++ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSMQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITAAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV TE+A AFAER F+ETSAL+S NV+ AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVLTEEAKAFAERNGLSFIETSALDSTNVDLAFQNILTEIYRIVSQKQIR-- 182
Query: 187 DDPAALPKG--------QTINVGTKDDVSAVKKVGCCS 216
DP P+G + I+V + V+K CC
Sbjct: 183 -DP---PEGDVIRPHNVEPIDVKPTMNTDGVRK-QCCQ 215
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 172/211 (81%), Gaps = 3/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSG GKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KALE
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEG 181
Query: 186 GDDPAAL-PKGQTINVGTKDDVSAVKKVGCC 215
A++ + Q I++ D K GCC
Sbjct: 182 ESGGASVGERRQIIDIEKTQDTE--NKGGCC 210
>gi|336261533|ref|XP_003345554.1| hypothetical protein SMAC_06207 [Sordaria macrospora k-hell]
gi|380094775|emb|CCC07276.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 214
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 176/217 (81%), Gaps = 11/217 (5%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ VTFENV RWLKELRDH D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TEDA FAE + F+ETSAL++ NVE AF +LT+IY++VS K +
Sbjct: 122 NKSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDN 181
Query: 186 GDDPAALPK------GQTINVG-TKDDVSAVKKVGCC 215
G P+ + GQ+I++ T +D A K GCC
Sbjct: 182 G--PSGSTEGHQNLSGQSISLSQTANDPQA--KSGCC 214
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFK VLIGDSGVGKSNLL RFTRNEF++ESKSTIGVEFATR+I D+K +KAQI
Sbjct: 4 EDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+T+ +F+NV RWLKELR+H DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL HLRAVSTE+A AFA N F+ETSA+++ NVE AF VLT+I+R+VS ++LE G
Sbjct: 124 KTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAG 183
Query: 187 DDPAALPKGQTINVG-TKDDVSAVKKVG-CC 215
DD GQT+N+ T +D++ K CC
Sbjct: 184 DDGVHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>gi|25012906|gb|AAN71540.1| RH21315p [Drosophila melanogaster]
Length = 214
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/222 (67%), Positives = 174/222 (78%), Gaps = 14/222 (6%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA +D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LES STIGVEFATRSI D K
Sbjct: 1 MGA--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESNSTIGVEFATRSIEVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLR+V T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
Query: 181 KALEIGDDPAALPKGQTIN------VGTKDDVSAVKKVGCCS 216
K + DP P+G I + K V+A + CC
Sbjct: 179 KQIR---DP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 214
>gi|338717415|ref|XP_001496560.3| PREDICTED: ras-related protein Rab-11A-like [Equus caballus]
Length = 346
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 168/212 (79%), Gaps = 1/212 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ D+ + FK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQ
Sbjct: 135 AEKDF-HFFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 193
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVG
Sbjct: 194 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVG 253
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 254 NKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSD 313
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 314 RRENDMSPSNNVVPIHVPPTTENKPKVQCCQN 345
>gi|405960755|gb|EKC26640.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 209
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 171/205 (83%), Gaps = 3/205 (1%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQE 73
F++VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQE
Sbjct: 5 FELVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHL 133
RYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGNK+DLRHL
Sbjct: 65 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHL 124
Query: 134 RAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALP 193
RAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IY++VS+K + D P
Sbjct: 125 RAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILTEIYKIVSQKQIRDSPDDDNSP 184
Query: 194 KG--QTINVGTKDDVSAVKKVGCCS 216
QTI+V D+ +A ++ CCS
Sbjct: 185 SNNVQTIHVAPTDN-AAPRQQKCCS 208
>gi|164427985|ref|XP_956972.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|18376163|emb|CAD21237.1| probable GTP-binding protein Drab11 [Neurospora crassa]
gi|157071962|gb|EAA27736.2| GTP-binding protein ypt3 [Neurospora crassa OR74A]
gi|336468176|gb|EGO56339.1| hypothetical protein NEUTE1DRAFT_130332 [Neurospora tetrasperma
FGSC 2508]
gi|350289578|gb|EGZ70803.1| putative GTP-binding protein Drab11 [Neurospora tetrasperma FGSC
2509]
Length = 214
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/217 (69%), Positives = 176/217 (81%), Gaps = 11/217 (5%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ VTFENV RWLKELRDH D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKGVTFENVNRWLKELRDHADQNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TEDA FAE + F+ETSAL++ NVE AF +LT+IY++VS K +
Sbjct: 122 NKSDLRHLRAVPTEDAKKFAEENHLSFIETSALDATNVELAFQNILTEIYKIVSTKNFDN 181
Query: 186 GDDPAALPK------GQTINVG-TKDDVSAVKKVGCC 215
G P+ + GQ+I++ T +D A K GCC
Sbjct: 182 G--PSGSNEGHQNLSGQSISLSQTANDPQA--KSGCC 214
>gi|315229760|gb|ADT91500.1| small monomeric GTPase [Bactrocera dorsalis]
Length = 197
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/192 (75%), Positives = 164/192 (85%), Gaps = 6/192 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQI
Sbjct: 1 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 60
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 61 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 120
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLR+V T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 121 KSDLRHLRSVPTDEARLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR-- 178
Query: 187 DDPAALPKGQTI 198
DP P+G I
Sbjct: 179 -DP---PEGDVI 186
>gi|327285863|ref|XP_003227651.1| PREDICTED: ras-related protein Rab-11A-like [Anolis carolinensis]
Length = 236
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/236 (63%), Positives = 173/236 (73%), Gaps = 20/236 (8%)
Query: 1 MGAYRADDDYDYLFK-------------------VVLIGDSGVGKSNLLSRFTRNEFSLE 41
MG R DD+YDYLFK +VLIGDSGVGKSNLLSRFTRNEF+LE
Sbjct: 1 MGGSR-DDEYDYLFKELQGCWVAIPIIPSLQIIKMVLIGDSGVGKSNLLSRFTRNEFNLE 59
Query: 42 SKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTF 101
SKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+
Sbjct: 60 SKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTY 119
Query: 102 ENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESM 161
ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+S
Sbjct: 120 ENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDST 179
Query: 162 NVENAFTEVLTQIYRVVSRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
NVE AF +LT+IYR+VS+K + + P + + K+ CC N
Sbjct: 180 NVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKMQCCQN 235
>gi|302691568|ref|XP_003035463.1| GTPase [Schizophyllum commune H4-8]
gi|300109159|gb|EFJ00561.1| GTPase [Schizophyllum commune H4-8]
Length = 210
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/207 (70%), Positives = 163/207 (78%), Gaps = 2/207 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A +FA N F+ETSAL++ NVE+AF +LT IYR+VS K+LE +
Sbjct: 126 DLKHLRAVPTDEAKSFAAENNLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSAN 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P P T D K CC
Sbjct: 186 PIEPPNSSVTVSATVDPTPQGNK--CC 210
>gi|219990677|gb|ACL68712.1| FI09227p [Drosophila melanogaster]
Length = 214
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/222 (67%), Positives = 174/222 (78%), Gaps = 14/222 (6%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA +D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K
Sbjct: 1 MGA--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELR H D NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRGHADQNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLR+V T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 119 IMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
Query: 181 KALEIGDDPAALPKGQTIN------VGTKDDVSAVKKVGCCS 216
K + DP P+G I + K V+A + CC
Sbjct: 179 KQIR---DP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 214
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A AF+ F+ETSAL++ NVE AF +LT IYR+VS KALE D
Sbjct: 126 DLKHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKALEQAAD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVG-CC 215
+G +I V D A K+ G CC
Sbjct: 186 SIKPTQGDSIPVRPTLDAPANKEGGKCC 213
>gi|296422463|ref|XP_002840780.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637003|emb|CAZ84971.1| unnamed protein product [Tuber melanosporum]
Length = 212
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 173/212 (81%), Gaps = 3/212 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +T++NV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKQITYDNVTRWLKELRDHADNNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TEDA FA + F+ETSAL+S NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEDAKNFAAENHLSFIETSALDSTNVELAFQTILTEIYRIVSSKALDG 181
Query: 186 GDDPAALPKG--QTINVGTKDDVSAVKKVGCC 215
GD G Q +++ T ++ K CC
Sbjct: 182 GDQHQVSQPGSSQPLHI-TPTAENSTKDTKCC 212
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 167/207 (80%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
++DYLFKVVLIGDSGVGKSNLLSRFTRNEF++E+KSTIGVEFATRSI + K +KAQIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+++H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV TE+A AFA F+ETSAL++ NVE+AF +LT IYR+VS K+LE +D
Sbjct: 126 DLKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSED 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P G TI V D + + CC
Sbjct: 186 PIKPTSGDTIQVSHSVDQNQSQGGKCC 212
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/208 (69%), Positives = 165/208 (79%), Gaps = 2/208 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YD+LFKVVLIGDSGVGKSNLLSRFTRNEF++ESKSTIGVEFATRSI D K +KAQIWDT
Sbjct: 7 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+++ ++ +V+RWLKELRDH DSNIVIMLVGNK+D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKSD 126
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
LRHLRAV TE+A AFA N F+ETSA+++ NVE+AF +LT IYR+VS KALE D
Sbjct: 127 LRHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKALESSGDS 186
Query: 190 AALPKGQTINVGTKDDVSAVKKVG--CC 215
G TI V D A G CC
Sbjct: 187 VGPTSGSTITVTPTADDGAKSNAGGKCC 214
>gi|242048154|ref|XP_002461823.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
gi|241925200|gb|EER98344.1| hypothetical protein SORBIDRAFT_02g008790 [Sorghum bicolor]
Length = 223
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 174/213 (81%), Gaps = 5/213 (2%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D+YDYLFKVVLIGDSGVGKSNLLSRFT+N F+L+SKSTIGVEFATR+I+ D K +KAQIW
Sbjct: 13 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFALDSKSTIGVEFATRTIQVDTKTIKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT+ +TFENV+RWLKELRDH DSNIV+ML+GNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDVTKVMTFENVKRWLKELRDHADSNIVVMLIGNK 132
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
DLRHLR+V+ EDA +FAE E FF+ETSAL++ NVE AF VL +IYR++S+K L +
Sbjct: 133 IDLRHLRSVAVEDAASFAESEGLFFIETSALDATNVEKAFQTVLAEIYRIISKKPLSSEE 192
Query: 188 DPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
+ L +GQ+I V + + + CCS+
Sbjct: 193 SGSGSGNLREGQSIQVSATNSSALTSR--CCSS 223
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 140/174 (80%), Positives = 158/174 (90%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDT
Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYR ITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+D
Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
LRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 122 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 175
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/209 (69%), Positives = 169/209 (80%), Gaps = 4/209 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATR+++ D K VKAQIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIWDT 68
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ + TF+NV+RWLKELRDH DSNIVIMLVGNK+D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNKSD 128
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L+HLRAV T+ A +FAE N FMETSAL++ NVE AF +LT IYR+VS KAL+ P
Sbjct: 129 LKHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKALDQNQGP 188
Query: 190 AALPKG-QTINVGTKDDVSAVKKVGCCSN 217
P +TI V ++ K GCC++
Sbjct: 189 GLTPGPRETITVSKSEE---KKNGGCCAS 214
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 172/213 (80%), Gaps = 7/213 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ T++NV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDPAALPKGQTINV---GTKDDVSAVKKVGCC 215
GD A G I++ GT D K CC
Sbjct: 182 GDAAQAPTGGVKIDMAPSGTPD----AKGNKCC 210
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 171/217 (78%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 ANRIDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+ GNK+DL HLR++S ED + AE+E F+ETSALE+ N+E AF +L++IY +VS+KA
Sbjct: 122 MAGNKSDLNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKA 181
Query: 183 L---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
L E A +G IN+ D A + GCCS
Sbjct: 182 LAAQEAAGSMAVPGQGTAINI---SDTYATNRRGCCS 215
>gi|336367947|gb|EGN96291.1| hypothetical protein SERLA73DRAFT_185967 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380674|gb|EGO21827.1| hypothetical protein SERLADRAFT_474770 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 166/207 (80%), Gaps = 2/207 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF ++SKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDFLFKVVLIGDSGVGKSNLLSRFTRNEFHVDSKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+++V RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYDSVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV TE+A AF+ F+ETSAL++ NV++AF +LT IYR+VS K+LE D
Sbjct: 126 DLKHLRAVPTEEAKAFSTENELSFIETSALDASNVDSAFQTILTGIYRIVSSKSLEQSAD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P P TI V D SA + CC
Sbjct: 186 PIRAPTSDTIPVAI--DSSAPSQSKCC 210
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 296 bits (757), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 176/213 (82%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+SI+ + K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++HVTFENVERWLKELRDH ++NIV+ML+GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLR V+ E+A FA++ N F+ETSAL++ V++AF +LT+IYR++SRK +
Sbjct: 125 KSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAAN 184
Query: 187 DDPAA-LPKGQTINVGT-KDDVSAVKKVGCCSN 217
L +G+TI + + +DD S K C +
Sbjct: 185 TATGPDLSRGETIALSSARDDASNRSKSSCAGS 217
>gi|345568399|gb|EGX51293.1| hypothetical protein AOL_s00054g363 [Arthrobotrys oligospora ATCC
24927]
Length = 209
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 174/211 (82%), Gaps = 4/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+++SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ASDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H+T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHITYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV+T++A AFA + F+ETSAL++ NVE AF +LT+IYR+VS K L
Sbjct: 122 NKSDLRHLRAVTTDEAKAFAAENHLSFIETSALDASNVELAFQNILTEIYRIVSSKVLPE 181
Query: 186 GDDPAALP-KGQTINVGTKDDVSAVKKVGCC 215
+ ++P +G ++ K+D K CC
Sbjct: 182 NEHGGSIPDRGIPLSDQPKNDQGGGK---CC 209
>gi|268565079|ref|XP_002639326.1| C. briggsae CBR-RAB-11.1 protein [Caenorhabditis briggsae]
Length = 211
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 164/208 (78%), Gaps = 17/208 (8%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI + K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A +AER F+ETSAL+S NVE AFT +LT+IY+ VS K +G
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK--HVG 182
Query: 187 DD---------------PAALPKGQTIN 199
D P PK Q N
Sbjct: 183 SDRQGYGGGGGTIIPAPPTEPPKKQCCN 210
>gi|357121701|ref|XP_003562556.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 221
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 142/201 (70%), Positives = 169/201 (84%), Gaps = 1/201 (0%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+ D+YDYLFK+VLIGDSGVGKSNLLSRFT+N FSL+SKSTIGVEFATR+I + K +KA
Sbjct: 10 QGGDEYDYLFKIVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTIEVEGKTIKA 69
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TF+NV+RWLKELRDH DSNIVIML+
Sbjct: 70 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTKGATFDNVKRWLKELRDHADSNIVIMLI 129
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK DL+HLR+V+ EDA +FAERE F+ETSAL++ NV+ AF VL +IYR++S+KAL
Sbjct: 130 GNKMDLKHLRSVAQEDAASFAEREGLSFIETSALDATNVDRAFQTVLGEIYRIISKKALS 189
Query: 185 IGDDPA-ALPKGQTINVGTKD 204
D A A+ +GQ+I V D
Sbjct: 190 TDDSGAGAVKEGQSIQVSAGD 210
>gi|294460998|gb|ADE76069.1| unknown [Picea sitchensis]
Length = 214
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 175/214 (81%), Gaps = 3/214 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A + DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I+ D K +
Sbjct: 2 ARKVDDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T++ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKNATFDNVKRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL H+RAV +DA FAE+E FMETSALES NVE +F +LT+IY++V RK+
Sbjct: 122 LVGNKSDLSHMRAVPIDDAQDFAEKEGLSFMETSALESTNVEKSFQSILTEIYQIVKRKS 181
Query: 183 LEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCC 215
L + +A P +G IN + ++ KK CC
Sbjct: 182 LAAEEAASAGPSQGTPINASDAETIA--KKRSCC 213
>gi|193645765|ref|XP_001950094.1| PREDICTED: ras-related protein Rab-11A-like isoform 1
[Acyrthosiphon pisum]
Length = 217
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 142/193 (73%), Positives = 165/193 (85%), Gaps = 6/193 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
D++YDYLFKVVLIGDSGVGKSNLL+RFTRNEF+LESKSTIGVEFATRSI+ + KI+KAQ
Sbjct: 4 GDEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+ + +T++NVERWL ELRDH D NIVIMLVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVG 123
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV ++ATAFAE N F+ETSAL+S NVE AF +LT+IY +VS+K +
Sbjct: 124 NKSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIYNIVSQKQMR- 182
Query: 186 GDDPAALPKGQTI 198
DP P+G TI
Sbjct: 183 --DP---PEGDTI 190
>gi|341883094|gb|EGT39029.1| hypothetical protein CAEBREN_12928 [Caenorhabditis brenneri]
Length = 211
Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 164/208 (78%), Gaps = 17/208 (8%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI + K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A +AER F+ETSAL+S NVE AFT +LT+IY+ VS K +G
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK--HVG 182
Query: 187 DD---------------PAALPKGQTIN 199
D P PK Q N
Sbjct: 183 SDRQGYGGGSGTIIPAPPTEPPKKQCCN 210
>gi|78499349|gb|ABB45709.1| Ras-related protein RAB11A [Ovis aries]
Length = 208
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 163/207 (78%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL 120
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
RH RAV T++A AFAE+ F+ET AL+S NVE AF +LT+IYR+V +K + +
Sbjct: 121 RHFRAVPTDEARAFAEKNGLSFIETFALDSTNVEAAFQTILTEIYRIVFQKQMSDRREND 180
Query: 191 ALPKGQTINVGTKDDVSAVKKVGCCSN 217
P + + KV CC N
Sbjct: 181 MFPSNNVVPIHVPPTTENKPKVQCCQN 207
>gi|17507543|ref|NP_490675.1| Protein RAB-11.1 [Caenorhabditis elegans]
gi|373220016|emb|CCD71701.1| Protein RAB-11.1 [Caenorhabditis elegans]
Length = 211
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 148/209 (70%), Positives = 166/209 (79%), Gaps = 4/209 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI + K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A +AER F+ETSAL+S NVE AFT +LT+IY+ VS K +G
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK--HVG 182
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D G + + S K CC
Sbjct: 183 TDRQGYGGGSGTIIPSP--ASDPPKKQCC 209
>gi|399163155|gb|AFP33153.1| rab-11.1, partial [Caenorhabditis elegans]
Length = 210
Score = 295 bits (755), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 148/209 (70%), Positives = 166/209 (79%), Gaps = 4/209 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI + K VKAQI
Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELRDH D NIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A +AER F+ETSAL+S NVE AFT +LT+IY+ VS K +G
Sbjct: 124 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK--HVG 181
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D G + + S K CC
Sbjct: 182 TDRQGYGGGSGTIIPSP--ASDPPKKQCC 208
>gi|308494106|ref|XP_003109242.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
gi|308246655|gb|EFO90607.1| CRE-RAB-11.1 protein [Caenorhabditis remanei]
Length = 211
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/208 (71%), Positives = 164/208 (78%), Gaps = 17/208 (8%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI + K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A +AER F+ETSAL+S NVE AFT +LT+IY+ VS K +G
Sbjct: 125 KSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNK--HVG 182
Query: 187 DD---------------PAALPKGQTIN 199
D P PK Q N
Sbjct: 183 TDRQGYGGGSGTIIPAPPTEPPKKQCCN 210
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/223 (65%), Positives = 177/223 (79%), Gaps = 13/223 (5%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R DD+YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS++ D K++KA
Sbjct: 4 RPDDEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FEN ERWLKELRDH D NIVIMLV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL+HLRAV+TE+ +A+ F+ETSAL++ +VE AF +LT IYR+V ++ L
Sbjct: 124 GNKSDLKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLA 183
Query: 185 IGDDPAALP---------KGQTINVG--TKDDVSAVKKVGCCS 216
GD A +G+TI+VG + D+ S+ +K CCS
Sbjct: 184 SGDPTVAKSASGAVYQAGRGETISVGNLSHDNRSSKRK--CCS 224
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 294 bits (753), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 165/207 (79%), Gaps = 1/207 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH D+NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A FA F+ETSAL++ NVE+AF +LT IYR+VS K+LE
Sbjct: 126 DLKHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLESSTS 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
PK ++I+VG D + CC
Sbjct: 186 NIEPPK-ESISVGITQDTKQQQGKTCC 211
>gi|357603306|gb|EHJ63705.1| ras-related GTP-binding protein Rab11 [Danaus plexippus]
Length = 213
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 172/214 (80%), Gaps = 11/214 (5%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+++ENVERWL+ELRDH D NI+IMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLR++ TE+A AFAER F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAERNGLSFIETSALDSTNVEPAFQNILTEIYRIVSQKQMR-- 182
Query: 187 DDPAALPKGQTINVGTKD-DVSAVK----KVGCC 215
DP P+G I + DV A + CC
Sbjct: 183 -DP---PEGDVIRPDAEPADVRAAGADAVRRNCC 212
>gi|340380586|ref|XP_003388803.1| PREDICTED: ras-related protein Rab-11B-like [Amphimedon
queenslandica]
Length = 219
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 174/217 (80%), Gaps = 14/217 (6%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K+VKAQI
Sbjct: 5 EEEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVDGKVVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYD+ +H+T+ENVERWLKEL+DH D+NIVIML GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALVVYDIAKHMTYENVERWLKELKDHADTNIVIMLAGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DLRHLRAVSTE+A FAE+ + F+ETSAL+S NVE AF +LT+IY +V +KA
Sbjct: 125 KCDLRHLRAVSTEEAKKFAEQHSLSFIETSALDSTNVEAAFQNILTEIYNIVIQKA---- 180
Query: 187 DDPA--------ALPKGQTINVGTKDDVSAVKKVGCC 215
PA ++ + + I + + D + K+ CC
Sbjct: 181 --PADGGQGGGGSVSETKVIKIDDQKDEKSGSKMKCC 215
>gi|338727253|ref|XP_001917048.2| PREDICTED: ras-related protein Rab-11B-like [Equus caballus]
Length = 329
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/174 (79%), Positives = 155/174 (89%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 133 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 192
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 193 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 252
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT +R R
Sbjct: 253 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTGRHRAWPR 306
>gi|346465357|gb|AEO32523.1| hypothetical protein [Amblyomma maculatum]
Length = 168
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/166 (84%), Positives = 153/166 (92%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G YRA+DDYDYLFK+VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS+ D K+
Sbjct: 3 GRYRAEDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDAKV 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTR TFEN ERWL+ELRDHTD NIV+
Sbjct: 63 LKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRSTFENAERWLRELRDHTDPNIVV 122
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAF 167
ML+GNK+DLRHL AVST+D AFAERE+ +FMETSALE+ NVENAF
Sbjct: 123 MLIGNKSDLRHLVAVSTDDGKAFAERESLYFMETSALEATNVENAF 168
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/218 (64%), Positives = 176/218 (80%), Gaps = 6/218 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K +
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF+NV+RWL+ELRDH D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED AF+E+E F+ETSALE++NVE AF VL++I+++VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 L---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
L E +G TINV + A K CCS+
Sbjct: 182 LAAQESASTNGRSMQGTTINVA---EAPAATKGSCCSS 216
>gi|408399192|gb|EKJ78316.1| hypothetical protein FPSE_01502 [Fusarium pseudograminearum CS3096]
Length = 212
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%), Gaps = 1/211 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDREPTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A +FA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G I++ D A K CC
Sbjct: 182 GDSAQATIGAGTNISLSKPADDDAAKGGKCC 212
>gi|324508455|gb|ADY43568.1| Ras-related protein Rab-11A [Ascaris suum]
Length = 240
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/208 (70%), Positives = 165/208 (79%), Gaps = 1/208 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K VKAQIWDT
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVEGKTVKAQIWDT 92
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ +HVT+E VERWLKELRDH D NIVIMLVGNK+D
Sbjct: 93 AGQERYRAITSAYYRGAVGALLVYDIAKHVTYEAVERWLKELRDHADQNIVIMLVGNKSD 152
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
LRHLRAV T++A A+AE+ F+ETSAL+S NVE AFT +LT+IY+ VS K GDD
Sbjct: 153 LRHLRAVPTDEAKAYAEKNQLSFIETSALDSTNVEAAFTNILTEIYKSVSVKHFG-GDDR 211
Query: 190 AALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ T + K CCSN
Sbjct: 212 VQVSPVGTNGIVISPTTDPQTKKQCCSN 239
>gi|375332073|gb|AFA52576.1| Rab11 family GTPase [Vaucheria litorea]
Length = 272
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/215 (65%), Positives = 177/215 (82%), Gaps = 3/215 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF++ESKSTIGVEFAT+SI+ ++K
Sbjct: 55 MGA--KDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATKSIQTENK 112
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
I+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+H TFEN ERWLKELRDH +SNIV
Sbjct: 113 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHSTFENAERWLKELRDHAESNIV 172
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK DLRHLR VS E+A FAE+ + F+ETSAL+S V+ AF ++LT+IY+++++
Sbjct: 173 VMLVGNKCDLRHLRTVSVEEAKEFAEKNSLAFIETSALDSSGVDTAFQQILTEIYKLMNK 232
Query: 181 KALE-IGDDPAALPKGQTINVGTKDDVSAVKKVGC 214
K + G++ + +G+ I + + D ++ C
Sbjct: 233 KQMSGNGNNSLNIGQGERIALNSGGDKASGDGSAC 267
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 172/212 (81%), Gaps = 2/212 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF+NV RWLKELRDH D+NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T+DA AFA F+ETSAL++ NVE AF + LT+IYR+VS KAL+
Sbjct: 122 NKSDLRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALDN 181
Query: 186 GDDPAALP-KGQTINVGTKDDVSA-VKKVGCC 215
A P +G +I + + + KK CC
Sbjct: 182 DAGSAGAPGQGTSIPLSSSNPPGGDAKKGQCC 213
>gi|2463536|dbj|BAA22522.1| GTP binding protein [Rattus norvegicus]
Length = 218
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 173/216 (80%), Gaps = 8/216 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVI+LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVILLVGN 124
Query: 127 KADLRHLRAVST-EDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
K+DLRHLRAV +A AFAER + F+ETSAL+S NVE AF +LT+IYR+VS+K +I
Sbjct: 125 KSDLRHLRAVCPLTEARAFAERHLS-FIETSALDSTNVEEAFKNILTEIYRIVSQK--QI 181
Query: 186 GDDPA--ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
D A P +++ K K+ CC N
Sbjct: 182 ADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQN 217
>gi|409046556|gb|EKM56036.1| hypothetical protein PHACADRAFT_257063 [Phanerochaete carnosa
HHB-10118-sp]
Length = 212
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 163/207 (78%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
++D+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS+ D K VKAQIWD
Sbjct: 6 NFDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLAIDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+++H T+ NV RWLKELRDH D NIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKHQTYSNVTRWLKELRDHADQNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A AF+ F+ETSAL++ NVE+AF +LT IYR+VS K+LE D
Sbjct: 126 DLKHLRAVPTDEAKAFSSENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSAD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P G I V D A CC
Sbjct: 186 PIKPSTGDNILVTPSVDPQAQSGSKCC 212
>gi|395502702|ref|XP_003755716.1| PREDICTED: ras-related protein Rab-11A [Sarcophilus harrisii]
Length = 284
Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/208 (67%), Positives = 165/208 (79%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
+ ++F VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDT
Sbjct: 76 FCFVFSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 135
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+D
Sbjct: 136 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 195
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
LRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + +
Sbjct: 196 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREN 255
Query: 190 AALPKGQTINVGTKDDVSAVKKVGCCSN 217
P + + KV CC N
Sbjct: 256 DMSPSNNVVPIHVSPTTENKPKVQCCQN 283
>gi|440902572|gb|ELR53352.1| Ras-related protein Rab-11A, partial [Bos grunniens mutus]
Length = 258
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/205 (68%), Positives = 163/205 (79%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
L +VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQ
Sbjct: 53 LIEVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 112
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRH
Sbjct: 113 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRH 172
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAAL 192
LRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + +
Sbjct: 173 LRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMS 232
Query: 193 PKGQTINVGTKDDVSAVKKVGCCSN 217
P + + KV CC N
Sbjct: 233 PSNNVVPIHVPPTTENKPKVQCCQN 257
>gi|296809015|ref|XP_002844846.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
gi|238844329|gb|EEQ33991.1| GTP-binding protein ypt3 [Arthroderma otae CBS 113480]
Length = 212
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 172/213 (80%), Gaps = 5/213 (2%)
Query: 6 ADDDYD--YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
A+D+YD Y+ VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +K
Sbjct: 2 ANDEYDVSYVVAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIK 61
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
+QIWDTAGQERYRAITSAYYRGAVGALLVYDV++H T+ENV RWLKELRDH DSNIVIML
Sbjct: 62 SQIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIML 121
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNK+DLRHLRAV T++A FA N F+ETSAL++ NVE AF +LT+I+R+VS KAL
Sbjct: 122 VGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKAL 181
Query: 184 EIGDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
E GD A L + + + D + KK GCC
Sbjct: 182 ESGDSSANQLGDRKVVEITKTPD--SEKKPGCC 212
>gi|121703301|ref|XP_001269915.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
gi|119398058|gb|EAW08489.1| Ras GTPase Rab11, putative [Aspergillus clavatus NRRL 1]
Length = 230
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/231 (64%), Positives = 174/231 (75%), Gaps = 23/231 (9%)
Query: 6 ADDDYDYLFK-------------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTI 46
A+D+YD+LFK VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTI
Sbjct: 2 ANDEYDFLFKGNVATFPAQSPQLFIPFRYVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTI 61
Query: 47 GVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER 106
GVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV R
Sbjct: 62 GVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNR 121
Query: 107 WLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENA 166
WLKELRDH DSNIVIMLVGNK+DLRHLRAV T++A FA N F+ETSAL++ NVE A
Sbjct: 122 WLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKQFASENNLSFIETSALDASNVELA 181
Query: 167 FTEVLTQIYRVVSRKALEIGDDP--AALPKGQTINVGTKDDVSAVKKVGCC 215
F +LT+IYR+VS KA+ G D A L G+TI V D + K GCC
Sbjct: 182 FQNILTEIYRIVSSKAIIEGGDSGQATLSSGRTIEVSKTPDTES--KQGCC 230
>gi|224124790|ref|XP_002329949.1| predicted protein [Populus trichocarpa]
gi|222871971|gb|EEF09102.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/219 (67%), Positives = 175/219 (79%), Gaps = 7/219 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG +R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ D K
Sbjct: 1 MG-HRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIV
Sbjct: 60 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM+ GNK+DL+HLRAV ED A AE+E F+ETSALE+ N+E AF +LT+IY ++S+
Sbjct: 120 IMMAGNKSDLKHLRAVLEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISK 179
Query: 181 KALEIGDDP--AALP-KGQTINVGTKDDVSAVKKVGCCS 216
KAL + + +P +G TINV D S GCCS
Sbjct: 180 KALAAQEAAANSTVPGQGTTINVA---DASGNTSKGCCS 215
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 164/207 (79%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
++DYLFKVVLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATR+I D K +KAQIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV TE+A AF+ F+ETSAL++ NVE+AF +LT I+R+VS K+LE D
Sbjct: 126 DLKHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLEPSGD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
G T+ V D S + CC
Sbjct: 186 AIKPSSGDTLTVSPSVDTSNAQASKCC 212
>gi|281347336|gb|EFB22920.1| hypothetical protein PANDA_002189 [Ailuropoda melanoleuca]
Length = 205
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 162/204 (79%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQE 73
F VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQE
Sbjct: 1 FSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 60
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHL 133
RYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHL
Sbjct: 61 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHL 120
Query: 134 RAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALP 193
RAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + + P
Sbjct: 121 RAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSP 180
Query: 194 KGQTINVGTKDDVSAVKKVGCCSN 217
+ + KV CC N
Sbjct: 181 SNNVVPIHVPPTTENKPKVQCCQN 204
>gi|326521852|dbj|BAK04054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 170/210 (80%), Gaps = 4/210 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ + KI+KAQIWDT
Sbjct: 16 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDT 75
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGA+GA+LVYDVT+ TFEN+ RWLKELRDH D+NI IMLVGNK D
Sbjct: 76 AGQERYRAITSAYYRGALGAVLVYDVTKPTTFENISRWLKELRDHADANIRIMLVGNKTD 135
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L+HLRAV+T+DA ++AE E ++ETSALE+MNVE AF +L IYR +S+KA+ +D
Sbjct: 136 LKHLRAVTTDDAGSYAEAEGLSYIETSALEAMNVEEAFQLILGDIYRTISKKAVASEEDR 195
Query: 190 AA---LPKGQTINVGTKDDVSAVKKVGCCS 216
AA + +G+TINV KK CCS
Sbjct: 196 AAAAGVKEGKTINVAATASDGGEKK-QCCS 224
>gi|353239723|emb|CCA71622.1| probable GTP-binding protein Rab11 [Piriformospora indica DSM
11827]
Length = 268
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/208 (68%), Positives = 165/208 (79%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHSTYTNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A AF+ F+ETSAL+ NVE AF +LT IYR+VS KALE D
Sbjct: 126 DLKHLRAVPTDEAKAFSADNGLSFIETSALDGGNVEAAFQNILTDIYRIVSNKALEAAPD 185
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCCS 216
G++I + + +A +K G +
Sbjct: 186 VIKPSGGESITIAPSSNTNANEKSGLIA 213
>gi|70990240|ref|XP_749969.1| Ras GTPase Rab11 [Aspergillus fumigatus Af293]
gi|66847601|gb|EAL87931.1| Ras GTPase Rab11, putative [Aspergillus fumigatus Af293]
gi|159130449|gb|EDP55562.1| Ras GTPase Rab11, putative [Aspergillus fumigatus A1163]
Length = 204
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 166/204 (81%), Gaps = 3/204 (1%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
+ VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQIWDTAGQ
Sbjct: 3 VLTVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 62
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
ERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSNIVIMLVGNK+DLRH
Sbjct: 63 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRH 122
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-PAA 191
LRAV T++A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+ GD A
Sbjct: 123 LRAVPTDEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDNGDSGQAP 182
Query: 192 LPKGQTINVGTKDDVSAVKKVGCC 215
L G+TI V D + K GCC
Sbjct: 183 LSSGRTIEVSKAPDTES--KQGCC 204
>gi|345309353|ref|XP_001518037.2| PREDICTED: ras-related protein Rab-11A-like [Ornithorhynchus
anatinus]
Length = 376
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 161/203 (79%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQER 74
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQER
Sbjct: 173 PVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 232
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
YRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLR
Sbjct: 233 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 292
Query: 135 AVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPK 194
AV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + + P
Sbjct: 293 AVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPS 352
Query: 195 GQTINVGTKDDVSAVKKVGCCSN 217
+ + KV CC N
Sbjct: 353 NNVVPIHVPPTTENKPKVQCCQN 375
>gi|171688708|ref|XP_001909294.1| hypothetical protein [Podospora anserina S mat+]
gi|170944316|emb|CAP70426.1| unnamed protein product [Podospora anserina S mat+]
Length = 211
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 169/210 (80%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++++T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKNITYENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T+DA FA + F+ETSAL++ NVE AF +LT+IY +VS K+
Sbjct: 122 NKSDLRHLRAVPTDDAKNFAAENHLSFIETSALDATNVELAFQNILTEIYNIVSTKSFAE 181
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D P+ N+ + + GCC
Sbjct: 182 EDGKKFDPREGGTNITLSQEGPKGESKGCC 211
>gi|297796867|ref|XP_002866318.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
gi|297312153|gb|EFH42577.1| hypothetical protein ARALYDRAFT_919138 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 148/218 (67%), Positives = 172/218 (78%), Gaps = 7/218 (3%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R + DYDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVEQDYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK- 181
+ GNKADL HLR+V+ ED AE E F+ETSALE+ NVE AF VL +IY ++S+K
Sbjct: 122 MAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKA 181
Query: 182 --ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
A E +A+P +G TINVG D S K GCCS
Sbjct: 182 LAAQEAAAANSAIPGQGTTINVG---DTSGAGKRGCCS 216
>gi|410927430|ref|XP_003977150.1| PREDICTED: ras-related protein Rab-11A-like [Takifugu rubripes]
Length = 215
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/211 (66%), Positives = 167/211 (79%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ + K VKAQI
Sbjct: 4 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIKVEGKTVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+EN ERWLKEL+DH DSNIVIMLVGN
Sbjct: 64 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV ++A AFAE+ F+ETSAL+S NVE AF +LT IY +VS++ +
Sbjct: 124 KSDLRHLRAVPIDEARAFAEKYGLSFLETSALDSSNVELAFHTILTAIYNIVSQRQMSGR 183
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D P + + + + K CC +
Sbjct: 184 SDSDFSPASNVVPITVEPTQTLSNKGVCCQS 214
>gi|355755401|gb|EHH59148.1| GTP-binding protein YPT3, partial [Macaca fascicularis]
Length = 213
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/177 (77%), Positives = 157/177 (88%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+Y VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYXXXXPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 181
>gi|449471775|ref|XP_002198100.2| PREDICTED: ras-related protein Rab-11A [Taeniopygia guttata]
Length = 258
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/202 (68%), Positives = 161/202 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 56 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 115
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRA
Sbjct: 116 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 175
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKG 195
V T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + + P
Sbjct: 176 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 235
Query: 196 QTINVGTKDDVSAVKKVGCCSN 217
+ + K+ CC N
Sbjct: 236 NVVPIHVPPTTENKPKMQCCQN 257
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 171/213 (80%), Gaps = 3/213 (1%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+ D+YDYLFKVVLIGDSGVGKSNLLSRFT+N FSL+SKSTIGVEFATR+ + + K +KA
Sbjct: 11 QGGDEYDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKA 70
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TFENV+RWLKELRDH DSNIVIML+
Sbjct: 71 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLI 130
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK DLRHLR+V+T+ A FAE E F+ETSAL++ NV+ AF VL +I+RV+S+KAL
Sbjct: 131 GNKTDLRHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALT 190
Query: 185 IGDDPAA-LPKGQTINVGTKDDVSAVKKVGCCS 216
D A + +GQ+I V + S + CCS
Sbjct: 191 TEDSGAGVVGEGQSILVSGGEPTSVSSR--CCS 221
>gi|225434794|ref|XP_002282136.1| PREDICTED: ras-related protein Rab2BV [Vitis vinifera]
gi|147777473|emb|CAN62732.1| hypothetical protein VITISV_031984 [Vitis vinifera]
Length = 217
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/217 (67%), Positives = 170/217 (78%), Gaps = 5/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ D K V
Sbjct: 2 ANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV+RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK- 181
+ GNK DL+HLRAVS ED AERE F+ETSALE+ N+E AF +LT+IY ++S+K
Sbjct: 122 MAGNKCDLKHLRAVSEEDGQGLAEREELSFLETSALEATNIEKAFQTILTEIYHIISKKA 181
Query: 182 -ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
A + ALP +G TINV D K CCS
Sbjct: 182 LAAQEAAASTALPGQGTTINV--NDASGNQNKKTCCS 216
>gi|112983314|ref|NP_001037618.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
gi|102993180|gb|ABF71467.1| ras-related GTP-binding protein Rab11 [Bombyx mori]
Length = 213
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/192 (72%), Positives = 164/192 (85%), Gaps = 6/192 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQI
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+++ENVERWL+ELRDH D NI+IMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLR++ TE+A AFAE F+ETSAL+S NVE AF +LT+IYR+VS++ +
Sbjct: 125 KSDLRHLRSIPTEEAKAFAEANGLSFIETSALDSTNVEPAFQNILTEIYRIVSQRQMR-- 182
Query: 187 DDPAALPKGQTI 198
DP P+G I
Sbjct: 183 -DP---PEGDVI 190
>gi|334314719|ref|XP_003340079.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Monodelphis
domestica]
Length = 205
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 140/202 (69%), Positives = 161/202 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 3 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 62
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRA
Sbjct: 63 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 122
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKG 195
V T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + + P
Sbjct: 123 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 182
Query: 196 QTINVGTKDDVSAVKKVGCCSN 217
+ + KV CC N
Sbjct: 183 NVVPIHVPPTTENKPKVQCCQN 204
>gi|340515772|gb|EGR46024.1| Ras-GTPase [Trichoderma reesei QM6a]
Length = 209
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 170/211 (80%), Gaps = 4/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDV---VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQ 58
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVG
Sbjct: 59 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVG 118
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV T++A AFA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 119 NKSDLRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 178
Query: 186 GDDP-AALPKGQTINVGTKDDVSAVKKVGCC 215
GD A + G I++ D A K CC
Sbjct: 179 GDGAQATIGAGTNISLSKAADDEASKSGKCC 209
>gi|42543202|pdb|1OIV|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
gi|42543203|pdb|1OIV|B Chain B, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp
Length = 191
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/169 (81%), Positives = 154/169 (91%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 83 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IY
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|417408648|gb|JAA50866.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 205
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/206 (69%), Positives = 166/206 (80%), Gaps = 6/206 (2%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA--ALP 193
V T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I D A P
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIADRAAHDESP 178
Query: 194 KGQTINVGTKDDVSAVK--KVGCCSN 217
+++ K K+ CC N
Sbjct: 179 GNNVVDISVPPTTDGQKPNKLQCCQN 204
>gi|326926865|ref|XP_003209617.1| PREDICTED: ras-related protein Rab-11A-like [Meleagris gallopavo]
Length = 217
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/217 (65%), Positives = 167/217 (76%), Gaps = 1/217 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M + D+D F +VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MSNNQNDEDTTPEF-LVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+
Sbjct: 120 IMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 179
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
K + + P + + K+ CC N
Sbjct: 180 KQMSDRRENDMSPSNNVVPIHVPPTTENKPKMQCCQN 216
>gi|281342864|gb|EFB18448.1| hypothetical protein PANDA_018338 [Ailuropoda melanoleuca]
Length = 204
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 166/205 (80%), Gaps = 6/205 (2%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQER 74
KVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQER
Sbjct: 1 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 60
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
YRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLR
Sbjct: 61 YRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLR 120
Query: 135 AVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA--AL 192
AV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I D A
Sbjct: 121 AVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIADRAAHDES 178
Query: 193 PKGQTINVGTKDDVSAVK--KVGCC 215
P +++ K K+ CC
Sbjct: 179 PGNNVVDISVPPTTDGQKPNKLQCC 203
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 175/218 (80%), Gaps = 6/218 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R +++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ D K V
Sbjct: 131 AHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 190
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F++V+RWL+ELR H D+NIV+M
Sbjct: 191 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 250
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED AF+E+E F+ETSALE++NVE AF +L++I++ VS+KA
Sbjct: 251 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 310
Query: 183 LEIGDDPAALPK---GQTINVGTKDDVSAVKKVGCCSN 217
L + + G TINV + S V K CCS+
Sbjct: 311 LAAQASASTNGRSMQGTTINVA---ESSTVTKGSCCSS 345
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/207 (70%), Positives = 164/207 (79%), Gaps = 3/207 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV RWLKELRDH DSNIVIMLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A AFA F+ETSAL++ NVE+AF +LT IYR+VS K+LE
Sbjct: 126 DLKHLRAVPTDEAKAFATENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLE-SSS 184
Query: 189 PAALPKGQTINVGTKDDVSAVKKVGCC 215
P Q I+V + A K CC
Sbjct: 185 TNIEPPTQGISVTAPE--PADKGGKCC 209
>gi|449266278|gb|EMC77353.1| Ras-related protein Rab-11A, partial [Columba livia]
Length = 203
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 139/202 (68%), Positives = 161/202 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKG 195
V T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+VS+K + + P
Sbjct: 121 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRENDMSPSN 180
Query: 196 QTINVGTKDDVSAVKKVGCCSN 217
+ + K+ CC N
Sbjct: 181 NVVPIHVPPTTENKPKMQCCQN 202
>gi|357135067|ref|XP_003569133.1| PREDICTED: ras-related protein RABA2a-like [Brachypodium
distachyon]
Length = 229
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/215 (65%), Positives = 172/215 (80%), Gaps = 7/215 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ + KI+KAQI
Sbjct: 16 EEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQI 75
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGA+GA+LVYDV++ TFEN+ RWLKELRDH D+NI IMLVGN
Sbjct: 76 WDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADANIRIMLVGN 135
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL+HLRAV+T+D +FAE E ++ETSALE+ NVE AF +L IYR +S+KA+ +
Sbjct: 136 KTDLKHLRAVATDDGQSFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKKAVALD 195
Query: 187 D-----DPAALPKGQTINVGTKDDVSAVKKVGCCS 216
D + +G+TINV D ++ +K CCS
Sbjct: 196 DGGAGGAGGGVKEGKTINVAASD--TSGEKKQCCS 228
>gi|15237828|ref|NP_200723.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
gi|75170819|sp|Q9FIF9.1|RAA2D_ARATH RecName: Full=Ras-related protein RABA2d; Short=AtRABA2d
gi|13877729|gb|AAK43942.1|AF370127_1 putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|9759237|dbj|BAB09761.1| GTP-binding protein rab11 [Arabidopsis thaliana]
gi|14532854|gb|AAK64109.1| putative GTP-binding protein rab11 [Arabidopsis thaliana]
gi|332009766|gb|AED97149.1| RAB GTPase homolog A2D [Arabidopsis thaliana]
Length = 217
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/218 (66%), Positives = 172/218 (78%), Gaps = 7/218 (3%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK- 181
+ GNKADL HLR+V+ ED AE E F+ETSALE+ NVE AF VL +IY ++S+K
Sbjct: 122 MAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKA 181
Query: 182 --ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
A E +A+P +G TINV +D S K GCCS
Sbjct: 182 LAAQEAAAANSAIPGQGTTINV---EDTSGAGKRGCCS 216
>gi|73535736|pdb|1YZK|A Chain A, Gppnhp Bound Rab11 Gtpase
Length = 184
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 137/168 (81%), Positives = 153/168 (91%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDT
Sbjct: 17 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 76
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+D
Sbjct: 77 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 136
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRV 177
LRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+
Sbjct: 137 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 184
>gi|341038786|gb|EGS23778.1| putative GTP-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 224
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/223 (65%), Positives = 168/223 (75%), Gaps = 13/223 (5%)
Query: 6 ADDDYDYLFK------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATR 53
A+D+YD+LFK VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATR
Sbjct: 2 ANDEYDFLFKALADSWAIPSRAVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATR 61
Query: 54 SIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRD 113
SI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ + +FENV RWLKELRD
Sbjct: 62 SIQIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIGKSSSFENVSRWLKELRD 121
Query: 114 HTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQ 173
H DSNIVIMLVGNK D RHLRAVSTED AFA F+ETSALE+ NV+ AF E+LT
Sbjct: 122 HADSNIVIMLVGNKTDKRHLRAVSTEDGKAFAAEHGLSFIETSALEATNVDLAFQEILTS 181
Query: 174 IYRVVSRKAL-EIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
IY++VS K+L E GD Q N+ + S ++ GCC
Sbjct: 182 IYQIVSSKSLAEEGDVSKKFDPSQGNNISLSQEKSQEEQKGCC 224
>gi|1370158|emb|CAA98185.1| RAB11I [Lotus japonicus]
Length = 163
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/165 (83%), Positives = 151/165 (91%), Gaps = 3/165 (1%)
Query: 52 TRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
TRS+R DK VKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR VTFENV+RWLKEL
Sbjct: 1 TRSVRIHDKTVKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKEL 60
Query: 112 RDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVL 171
RDHTD+NIVIMLVGNKADLRHLRAV TE+ATAFAERENT+FMETSALES+NV+NAF EVL
Sbjct: 61 RDHTDANIVIMLVGNKADLRHLRAVPTEEATAFAERENTYFMETSALESLNVDNAFIEVL 120
Query: 172 TQIYRVVSRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
++IY VVSRK LE G+DP ALP+GQTIN+G DVSAVKK GCCS
Sbjct: 121 SEIYNVVSRKTLEKGNDPGALPQGQTINLG---DVSAVKKPGCCS 162
>gi|355714809|gb|AES05124.1| RAB11B, member RAS oncoprotein family [Mustela putorius furo]
Length = 204
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/205 (69%), Positives = 165/205 (80%), Gaps = 6/205 (2%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 136
AITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 120
Query: 137 STEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA--ALPK 194
T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I D A P
Sbjct: 121 PTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIADRAAHDESPG 178
Query: 195 GQTINVGTKDDVSAVK--KVGCCSN 217
+++ K K+ CC N
Sbjct: 179 NNVVDISVPPTTDGQKPSKLQCCQN 203
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 175/218 (80%), Gaps = 6/218 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R +++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ D K V
Sbjct: 2 AHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F++V+RWL+ELR H D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED AF+E+E F+ETSALE++NVE AF +L++I++ VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 181
Query: 183 LEIGDDPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
L + +G TINV + S V K CCS+
Sbjct: 182 LAAQASASTNGRSMQGTTINVA---ESSTVTKGSCCSS 216
>gi|334326820|ref|XP_001376337.2| PREDICTED: ras-related protein Rab-11B-like [Monodelphis domestica]
Length = 218
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 167/209 (79%), Gaps = 6/209 (2%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
+ K VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQ
Sbjct: 11 ICKFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGNK+DLRH
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRH 130
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA-- 190
LRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT+IYR+VS+K +I D A
Sbjct: 131 LRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK--QIADRSAHD 188
Query: 191 ALPKGQTINVGTKDDVSAVK--KVGCCSN 217
P +++ K K+ CC N
Sbjct: 189 ESPGNNVVDISVPPTTDGQKSNKLQCCQN 217
>gi|119389963|pdb|2HV8|A Chain A, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389965|pdb|2HV8|B Chain B, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
gi|119389967|pdb|2HV8|C Chain C, Crystal Structure Of Gtp-Bound Rab11 In Complex With Fip3
Length = 172
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/170 (80%), Positives = 154/170 (90%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIW
Sbjct: 3 DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAG ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK
Sbjct: 63 DTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNK 122
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRV 177
+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IYR+
Sbjct: 123 SDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 172
>gi|115461617|ref|NP_001054408.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|46359908|gb|AAS88840.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|52353601|gb|AAU44167.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113577959|dbj|BAF16322.1| Os05g0105100 [Oryza sativa Japonica Group]
gi|125550513|gb|EAY96222.1| hypothetical protein OsI_18113 [Oryza sativa Indica Group]
gi|215734964|dbj|BAG95686.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629896|gb|EEE62028.1| hypothetical protein OsJ_16810 [Oryza sativa Japonica Group]
Length = 220
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 172/219 (78%), Gaps = 6/219 (2%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G RA+++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ + KI
Sbjct: 3 GTRRAEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKI 62
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TF+N+ RWLKELRDH D+NI I
Sbjct: 63 IKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKELRDHADANIRI 122
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
MLVGNK DL+HLRAV+T+DA FAE E ++ETSALE+ NVE AF +L IYR +S+K
Sbjct: 123 MLVGNKTDLKHLRAVATDDAHKFAEAEGLSYIETSALEATNVEEAFQLILGDIYRAISKK 182
Query: 182 ALEIGD----DPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+ + + +G+TINV D S K+ CCS
Sbjct: 183 PVASDEGGAGAAGGVKEGKTINVAAGDANSEKKQ--CCS 219
>gi|405977015|gb|EKC41487.1| Ras-related protein Rab-11B [Crassostrea gigas]
Length = 172
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/166 (81%), Positives = 152/166 (91%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 125 KSDLRHLRAVPTDEAKAFAEKNNLSFIETSALDSTNVETAFQNILT 170
>gi|119182491|ref|XP_001242374.1| hypothetical protein CIMG_06270 [Coccidioides immitis RS]
Length = 227
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/228 (63%), Positives = 172/228 (75%), Gaps = 20/228 (8%)
Query: 6 ADDDYDYLFK-----------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGV 48
A+D+YD+LFK +VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGV
Sbjct: 2 ANDEYDFLFKGTSYTPRPAMSNPILRALVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGV 61
Query: 49 EFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL 108
EFATRSI+ D K +K+QIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWL
Sbjct: 62 EFATRSIQVDSKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWL 121
Query: 109 KELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFT 168
KELRDH DSNIVIMLVGNK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF
Sbjct: 122 KELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQ 181
Query: 169 EVLTQIYRVVSRKALEIGDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
+LT+I+R+VS KAL+ GD L + + + D + K GCC
Sbjct: 182 NILTEIFRIVSSKALDSGDSAQNPLSDRKVVEITKTQDPES--KQGCC 227
>gi|328717635|ref|XP_003246264.1| PREDICTED: ras-related protein Rab-11A-like isoform 2
[Acyrthosiphon pisum]
Length = 223
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/181 (75%), Positives = 159/181 (87%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLFKVVLIGDSGVGKSNLL+RFTRNEF+LESKSTIGVEFATRSI+ + KI+KAQI
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIKVNKKIIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ + +T++NVERWL ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKQLTYQNVERWLSELRDHADQNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV ++ATAFAE N F+ETSAL+S NVE AF +LT+I+R VS + ++
Sbjct: 125 KSDLRHLRAVPADEATAFAEANNLSFIETSALDSTNVETAFENILTEIHRKVSARQMDSM 184
Query: 187 D 187
D
Sbjct: 185 D 185
>gi|351722452|ref|NP_001235197.1| uncharacterized protein LOC100306448 [Glycine max]
gi|255628567|gb|ACU14628.1| unknown [Glycine max]
Length = 147
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/147 (93%), Positives = 144/147 (97%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRAD+DYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADEDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIV
Sbjct: 61 VLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAER 147
+MLVGNKADLRHLRAVSTE+ T FAER
Sbjct: 121 VMLVGNKADLRHLRAVSTEETTNFAER 147
>gi|303273638|ref|XP_003056179.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
gi|226462263|gb|EEH59555.1| ras-related protein rab11a-like protein [Micromonas pusilla
CCMP1545]
Length = 216
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+ +DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I D +KA
Sbjct: 3 KDNDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEVDTNTIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ ++E+VE+WLKELRDH D+NIVIML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYEDVEKWLKELRDHADANIVIMLI 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK DL+HLR V TEDA FA E F ETSALES NVE AF ++LT+++++VS+K+
Sbjct: 123 GNKCDLKHLRCVQTEDARLFAANEGLSFTETSALESTNVELAFHQILTEVFQIVSKKSQS 182
Query: 185 I-GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+D + TI V +D K CCS
Sbjct: 183 NESNDQSQRHGSSTIEVNAINDGVKKSKSQCCS 215
>gi|42543204|pdb|1OIW|A Chain A, X-ray Structure Of The Small G Protein Rab11a In Complex
With Gtpgammas
gi|60593433|pdb|1OIX|A Chain A, X-Ray Structure Of The Small G Protein Rab11a In Complex
With Gdp And Pi
Length = 191
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/169 (81%), Positives = 153/169 (90%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 23 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 82
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 83 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 142
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IY
Sbjct: 143 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 191
>gi|189194986|ref|XP_001933831.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979710|gb|EDU46336.1| GTP-binding protein yptV1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|451995174|gb|EMD87643.1| hypothetical protein COCHEDRAFT_1159917 [Cochliobolus
heterostrophus C5]
Length = 208
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/210 (67%), Positives = 166/210 (79%), Gaps = 3/210 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD + VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDVM---VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQ 58
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVG
Sbjct: 59 IWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVG 118
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+
Sbjct: 119 NKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ 178
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G+ + + A +K GCC
Sbjct: 179 GEGSGPVLGNDRKVLEISKSADAEQKKGCC 208
>gi|388583882|gb|EIM24183.1| ras-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 222
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/217 (65%), Positives = 169/217 (77%), Gaps = 13/217 (5%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYLFKVVLIGDSGVGKS++LSRFTRNEF+++SKSTIGVEFATRS+ D K +KAQIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSSVLSRFTRNEFNMDSKSTIGVEFATRSLEVDQKTIKAQIWDT 67
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+++ +F NVERWLKEL+DH DSNIVIMLVGNK+D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDISKQSSFANVERWLKELKDHADSNIVIMLVGNKSD 127
Query: 130 LRHLRAVSTEDATAFAERENTF-----------FMETSALESMNVENAFTEVLTQIYRVV 178
L+HLRAV T +A ++ E ++ F+ETSAL+S NVE AF +LT IY++V
Sbjct: 128 LKHLRAVPTAEAQSYTEEKSKLEDGTESSNPIRFIETSALDSTNVEAAFQNILTDIYQLV 187
Query: 179 SRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ KALE G D G+TINV D S KK GCC
Sbjct: 188 ATKALE-GGDSIKPTNGETINVQPTSD-SDNKKAGCC 222
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/166 (82%), Positives = 152/166 (91%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
K+DLRHLRAV T++A AFAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 170
>gi|326521104|dbj|BAJ96755.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 179/218 (82%), Gaps = 6/218 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R D++YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 AHRVDNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLV+D+T+ TF+NV+RWL+ELRDH D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED+ AF+E+E F+ETSALE++NVE AF VL++I+++VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDSQAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKA 181
Query: 183 LEIGDDPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
L + AA +G TINV + S K CCS+
Sbjct: 182 LAAQESAAANGRSMQGTTINVA---EPSTNAKGSCCSS 216
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 174/214 (81%), Gaps = 4/214 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKAQ 65
D+ YDYL+K+VLIGDSGVGKSN+LSRFTR+EF+LESKSTIGVEFAT+S+ D+ K++KAQ
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FENVERWLKELRDH D NIVI+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLRAVS E+AT FA RE+ F+ETSAL++ NVE AF ++L +IY + +K +E
Sbjct: 125 NKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIED 184
Query: 186 GDDPAALP-KGQTINVGTKDDVSAVKKV--GCCS 216
P +GQ I++ + S +++ GCCS
Sbjct: 185 NPQSTTQPGRGQKIHLDEERTDSQIRQSRRGCCS 218
>gi|339521883|gb|AEJ84106.1| Ras-like protein Rab-11B [Capra hircus]
Length = 218
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 166/213 (77%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIG SGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGGSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ + +T+EN ERWLKELRDH DSNIVI LVG
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKPLTYENGERWLKELRDHADSNIVIRLVGT 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--E 184
K+ LRHLRAV T++A AF+E+ N F+ TSAL+S NVE AF +LT+IYR+VS+K +
Sbjct: 125 KSALRHLRAVPTDEARAFSEKNNLSFIATSALDSTNVEEAFKNILTEIYRIVSQKQIADR 184
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D + I+V D K+ CC N
Sbjct: 185 AAHDESPGNNFVDISVPPTTDGQNPNKLQCCQN 217
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 138/170 (81%), Positives = 153/170 (90%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+ R
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAFQTILTEEQR 174
>gi|162464337|ref|NP_001105300.1| small GTP binding protein2 [Zea mays]
gi|1020093|dbj|BAA06702.1| mgp2 GTP-binding protein [Zea mays]
Length = 216
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/218 (71%), Positives = 169/218 (77%), Gaps = 17/218 (7%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDY+FKVV+IGDSGVGKS LL F RN +LESKSTIGVEFATRSIR +DK+VKAQIWD
Sbjct: 7 EYDYVFKVVVIGDSGVGKSQLLMGFARNH-NLESKSTIGVEFATRSIRFEDKVVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFM------ETSALESMNVENAFTEVLTQIYRVVSRKA 182
DLRHLRAV+TEDA AFAE E+TFFM ETSAL+ AF VLT IYR+ S+K
Sbjct: 126 DLRHLRAVATEDAKAFAEMESTFFMGNIRYGETSALKE-----AFKNVLTDIYRIASQKN 180
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVK---KVGCCSN 217
L L +GQ V DDV + K CCSN
Sbjct: 181 LSANAAQTHL-QGQG-KVVQNDDVQEPQGKSKRSCCSN 216
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 174/218 (79%), Gaps = 6/218 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+R +++YDYLFK+VLIGDSGVGKSN+ SRFTRNEF LESKSTIGVEFATR+++ D K V
Sbjct: 2 AHRVNNEYDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F++V+RWL+ELR H D+NIV+M
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
+VGNK+DL HLR+V ED AF+E+E F+ETSALE++NVE AF +L++I++ VS+KA
Sbjct: 122 MVGNKSDLNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKA 181
Query: 183 LEIGDDPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
L + +G TINV + S V K CCS+
Sbjct: 182 LAAQASASTNGRSMQGTTINVA---ESSTVTKGSCCSS 216
>gi|15232652|ref|NP_190267.1| Ras-related protein RABA2c [Arabidopsis thaliana]
gi|297819266|ref|XP_002877516.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|3915842|sp|Q96283.4|RAA2C_ARATH RecName: Full=Ras-related protein RABA2c; Short=AtRABA2c; AltName:
Full=Ras-related protein Rab11A; Short=AtRab11A
gi|2598229|emb|CAA70112.1| Rab11 protein [Arabidopsis thaliana]
gi|5541676|emb|CAB51182.1| Rab11 protein [Arabidopsis thaliana]
gi|17529190|gb|AAL38821.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|20465471|gb|AAM20195.1| putative GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|21593047|gb|AAM64996.1| GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|297323354|gb|EFH53775.1| hypothetical protein ARALYDRAFT_485055 [Arabidopsis lyrata subsp.
lyrata]
gi|332644688|gb|AEE78209.1| Ras-related protein RABA2c [Arabidopsis thaliana]
Length = 217
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 172/218 (78%), Gaps = 7/218 (3%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+ + + K +K
Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIK 62
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELRDH DSNIVIM+
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMM 122
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK-- 181
GNK+DL HLR+V+ ED + AE+E F+ETSALE+ NVE AF +L +IY ++S+K
Sbjct: 123 AGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKAL 182
Query: 182 -ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCSN 217
A E +A+P +G TINV DD S K CCS+
Sbjct: 183 AAQEAAAANSAIPGQGTTINV---DDTSGGAKRACCSS 217
>gi|124513178|ref|XP_001349945.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
gi|1220272|emb|CAA63652.1| small GTPase rab11 [Plasmodium falciparum 3D7]
gi|23615362|emb|CAD52353.1| Rab11a, GTPase [Plasmodium falciparum 3D7]
Length = 216
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 174/212 (82%), Gaps = 3/212 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQ 65
+D YDYLFK+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+ ++KI+KAQ
Sbjct: 5 EDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELRD+ DSNIVI+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLR ++ DAT +A++E F+ETSALE+ NVE AF ++L +IY V +K
Sbjct: 125 NKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATK 184
Query: 186 GDDPAAL-PKGQTINVGTKDDVSAVKKVG-CC 215
DD ++ P+G+ INV +D + KK CC
Sbjct: 185 NDDNLSIQPRGKKINVDDDNDKNETKKKNKCC 216
>gi|346320690|gb|EGX90290.1| Ras GTPase Rab11, putative [Cordyceps militaris CM01]
Length = 204
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 141/200 (70%), Positives = 163/200 (81%), Gaps = 1/200 (0%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQIWDTAGQERYR
Sbjct: 5 VLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYR 64
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 136
AITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVGNK+DLRHLRAV
Sbjct: 65 AITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAV 124
Query: 137 STEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP-AALPKG 195
TE+A AFA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+ GD A + G
Sbjct: 125 PTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDGGDSAQATIGAG 184
Query: 196 QTINVGTKDDVSAVKKVGCC 215
I++ D A K CC
Sbjct: 185 TNISLSKPADDDASKGGKCC 204
>gi|8778562|gb|AAF79570.1|AC022464_28 F22G5.24 [Arabidopsis thaliana]
Length = 231
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 144/232 (62%), Positives = 173/232 (74%), Gaps = 21/232 (9%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC----- 57
A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++
Sbjct: 2 ANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVISLLS 61
Query: 58 -----DD-------KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE 105
D+ K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV
Sbjct: 62 LSLNLDNFPPDQFGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVL 121
Query: 106 RWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVEN 165
RWL+ELRDH DSNIVIM+ GNK+DL HLR+V+ ED + AE+E F+ETSALE+ N+E
Sbjct: 122 RWLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEK 181
Query: 166 AFTEVLTQIYRVVSRKALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
AF +L++IY ++S+KAL + LP +G IN+ D SA + GCCS
Sbjct: 182 AFQTILSEIYHIISKKALAAQEAAGNLPGQGTAINI---SDSSATNRKGCCS 230
>gi|388497366|gb|AFK36749.1| unknown [Lotus japonicus]
Length = 218
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/219 (65%), Positives = 176/219 (80%), Gaps = 9/219 (4%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R +++YDYLFKVVLIGDSGVGKSNL SRFTRNEF LESKSTIGVEFATR++ + ++V
Sbjct: 2 ARRGEEEYDYLFKVVLIGDSGVGKSNLFSRFTRNEFCLESKSTIGVEFATRTLEVEGRMV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +FENV RWLKELRDH D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+HLR V+TEDA ++AE+E F+ETSALE+ NV+ AF +L QIYR++S+K+
Sbjct: 122 LIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRIISKKS 181
Query: 183 LEIGD-DPAA--LPKGQTINV--GTKDDVSAVKKVGCCS 216
L DP+A + +G TI + G + + S CC+
Sbjct: 182 LSSSSTDPSAPNIKQGNTITIEGGLQPNTSK----SCCT 216
>gi|3024506|sp|Q40523.1|RB11A_TOBAC RecName: Full=Ras-related protein Rab11A
gi|623582|gb|AAA74115.1| Nt-Rab11a [Nicotiana tabacum]
Length = 216
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 173/217 (79%), Gaps = 6/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEFATR+++ + K V
Sbjct: 2 ANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALL YD+T+ TF+NV+RWL+ELRDH DSNIVI+
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVII 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK- 181
L GNK+DL+HLRAVS +D A ++E F+ETSALE++NV+ AF +LT IY ++S+K
Sbjct: 122 LAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKKA 181
Query: 182 -ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
A + ALP +G TINV D SA K GCCS
Sbjct: 182 LAAQEAAASTALPGQGTTINVS---DNSANVKRGCCS 215
>gi|332028148|gb|EGI68199.1| Ras-related protein Rab-11B [Acromyrmex echinatior]
Length = 219
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/189 (73%), Positives = 159/189 (84%), Gaps = 6/189 (3%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y + VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDT
Sbjct: 12 YTRMNPFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 71
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGNK+D
Sbjct: 72 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSD 131
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
LRHLRAV T++A AFAER F+ETSAL+S NVE AF +LT+IYR+VS+K + DP
Sbjct: 132 LRHLRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR---DP 188
Query: 190 AALPKGQTI 198
P+G TI
Sbjct: 189 ---PEGDTI 194
>gi|114794171|pdb|2GZD|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794172|pdb|2GZD|B Chain B, Crystal Structure Of Rab11 In Complex With Rab11-Fip2
gi|114794175|pdb|2GZH|A Chain A, Crystal Structure Of Rab11 In Complex With Rab11-Family
Interacting Protein 2
Length = 173
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/169 (80%), Positives = 152/169 (89%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVI LVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
K+DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IY
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 173
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/196 (69%), Positives = 166/196 (84%), Gaps = 2/196 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKAQ 65
D+ YDYL+K+VLIGDSGVGKSN+LSRFTR+EF+LESKSTIGVEFAT+S+ D+ K++KAQ
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FENVERWLKELRDH D NIVI+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLRAVS E+AT FA RE+ F+ETSAL++ NVE AF ++L +IY + +K +E
Sbjct: 125 NKSDLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIED 184
Query: 186 GDDPAALP-KGQTINV 200
A P +GQ I+V
Sbjct: 185 NPQSTAQPGRGQKIHV 200
>gi|169597663|ref|XP_001792255.1| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
gi|160707568|gb|EAT91269.2| hypothetical protein SNOG_01620 [Phaeosphaeria nodorum SN15]
Length = 215
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/215 (66%), Positives = 168/215 (78%), Gaps = 6/215 (2%)
Query: 6 ADDDYDY---LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+D+YD VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +
Sbjct: 2 ANDEYDVSPACHTFVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KA
Sbjct: 122 LVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKA 181
Query: 183 LEIGDDPAALPKGQ--TINVGTKDDVSAVKKVGCC 215
L+ G+ + G+ + + D KK GCC
Sbjct: 182 LDQGEGGQNVLGGERKVLEISKSAD-EGQKKNGCC 215
>gi|46116970|ref|XP_384503.1| hypothetical protein FG04327.1 [Gibberella zeae PH-1]
Length = 199
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/199 (69%), Positives = 162/199 (81%), Gaps = 1/199 (0%)
Query: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRA 77
+IGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRA
Sbjct: 1 MIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRA 60
Query: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 137
ITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVGNK+DLRHLRAV
Sbjct: 61 ITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVP 120
Query: 138 TEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP-AALPKGQ 196
TE+A +FA + F+ETSAL++ NVE AF +LT+IYR+VS KAL+ GD A + G
Sbjct: 121 TEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGAGT 180
Query: 197 TINVGTKDDVSAVKKVGCC 215
I++ D A K CC
Sbjct: 181 NISLSKPADDDAAKGGKCC 199
>gi|162464222|ref|NP_001105299.1| small GTP binding protein1 [Zea mays]
gi|1020092|dbj|BAA06701.1| mgp1 GTP-binding protein [Zea mays]
Length = 211
Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 147/212 (69%), Positives = 165/212 (77%), Gaps = 17/212 (8%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+V+IGD VGKS LLS F RNEFSL+SK TIGVEFATRSIR +DK+VKAQIWDTA
Sbjct: 11 DYVFKIVVIGDDAVGKSQLLSGFARNEFSLDSKGTIGVEFATRSIRFEDKVVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERY AITSAYYRGA GALLVYDVTRH TFE V RWLKELRDHTDSNIVIMLVGNKADL
Sbjct: 71 GQERYLAITSAYYRGAAGALLVYDVTRHATFETVGRWLKELRDHTDSNIVIMLVGNKADL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD--- 187
RHLRAVSTEDA AFAE+E+ FFMETSA + NV+ +F +LT IYR++S+K+L + D
Sbjct: 131 RHLRAVSTEDAKAFAEKESIFFMETSA-QDTNVKTSFETLLTDIYRILSKKSL-VADTYV 188
Query: 188 ---DPAALPKGQTINVGTKDDVSAVKKVGCCS 216
A L G I+VG GCCS
Sbjct: 189 DSLTVARLLGGTKISVGPG---------GCCS 211
>gi|367054586|ref|XP_003657671.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
gi|347004937|gb|AEO71335.1| hypothetical protein THITE_2123570 [Thielavia terrestris NRRL 8126]
Length = 213
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 155/178 (87%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D+K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDNKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ ++FENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
NK D RHLRAV TED FA F+ETSALE+ NV+ AF +LT IY++VS K+L
Sbjct: 122 NKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL 179
>gi|168046618|ref|XP_001775770.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672922|gb|EDQ59453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 137/215 (63%), Positives = 170/215 (79%), Gaps = 6/215 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+ DY+FKVVLIGDS VGKS LL+RF+RNEFSLESK+TIGVEF TR++ D K +KAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSLESKATIGVEFQTRTVVVDHKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V+RWL+ELR H D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVIMLIGN 128
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--- 183
K+DL +LR V T+ A FAE+E+ F+ETSA+ES NVE AF VL++IY+VVS+KAL
Sbjct: 129 KSDLSNLRQVETDTAREFAEKESLSFLETSAMESTNVETAFFTVLSEIYKVVSKKALLAD 188
Query: 184 -EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G+ P L G I + KDDV KK GCCS+
Sbjct: 189 ENQGNSP--LLPGTKIKLADKDDVIGAKKAGCCSS 221
>gi|388513607|gb|AFK44865.1| unknown [Lotus japonicus]
Length = 196
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/176 (74%), Positives = 155/176 (88%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R +++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ + ++V
Sbjct: 2 ARRGEEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLEVEGRMV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +FENV RWLKELRDH D+NIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTSFENVTRWLKELRDHADANIVIM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV 178
L+GNK DL+HLR V+TEDA ++AE+E F+ETSALE+ NV+ AF +L QIYR++
Sbjct: 122 LIGNKTDLKHLRGVATEDAQSYAEKEGLSFIETSALEATNVDKAFQTILAQIYRII 177
>gi|226287961|gb|EEH43474.1| GTP-binding protein ypt3 [Paracoccidioides brasiliensis Pb18]
Length = 210
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 163/211 (77%), Gaps = 3/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR+H D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK D +H+R V T DA FA+ F+ETSAL++ NVE AF +LT+IYR+VS KALE
Sbjct: 122 NKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIYRIVSSKALEN 181
Query: 186 GDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
G L + I + D A +K CC
Sbjct: 182 GSSSQNPLGDRKVIEISKTQDADAKQK--CC 210
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/178 (75%), Positives = 154/178 (86%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ ++FENV RWLKELRDH DSNIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
NK D RHLRAV TED FA F+ETSALE+ NV+ AF +LT IY++VS K+L
Sbjct: 122 NKTDQRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSL 179
>gi|168001936|ref|XP_001753670.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695077|gb|EDQ81422.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 170/218 (77%), Gaps = 2/218 (0%)
Query: 2 GAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
G + D+ DY+FKVVLIGDS VGKS LLSRF+RNEFSLESK+TIGVEF TR+I D K
Sbjct: 4 GYHEYDNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKT 63
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V+RWL+ELR H D+NIVI
Sbjct: 64 IKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKQQSFDHVQRWLEELRAHADANIVI 123
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
ML+GNK+DL +LR V T+ A +AE+E F+ETSA+ES NVE AF VL++IY++VS+
Sbjct: 124 MLIGNKSDLSNLRQVDTDVARVYAEKEKLSFLETSAMESTNVETAFYAVLSEIYKIVSKN 183
Query: 182 ALEIGDDPAALP--KGQTINVGTKDDVSAVKKVGCCSN 217
AL ++ P G IN+ KDDV K+ GCCS+
Sbjct: 184 ALIADENQGGTPLLSGTKINLTDKDDVIGSKRAGCCSS 221
>gi|154277098|ref|XP_001539394.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|150414467|gb|EDN09832.1| Rab1a [Ajellomyces capsulatus NAm1]
gi|225554603|gb|EEH02899.1| GTP-binding protein ypt3 [Ajellomyces capsulatus G186AR]
gi|240276947|gb|EER40457.1| GTP-binding protein [Ajellomyces capsulatus H143]
gi|325094881|gb|EGC48191.1| GTP-binding protein ypt3 [Ajellomyces capsulatus H88]
Length = 210
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR+H D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK D +H+RA+ T+ FAE F+ETSAL++ NVE AF +LT+IYR+VS KALE
Sbjct: 122 NKIDQKHVRAIKTDQGAEFAEARKLSFIETSALDATNVELAFQNILTEIYRIVSSKALEN 181
Query: 186 GDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
G+ L + + + D A +K CC
Sbjct: 182 GNSGQNPLGDRKVVEITKSQDADAKQK--CC 210
>gi|449450768|ref|XP_004143134.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
gi|449520383|ref|XP_004167213.1| PREDICTED: ras-related protein Rab11C-like [Cucumis sativus]
Length = 217
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 175/218 (80%), Gaps = 5/218 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A++ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEF+T++++ + K V
Sbjct: 2 AHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFENV+RWL+ELRDH DSNIVI+
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIV 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
++GNK+DL HLR+VS +D AE+E F+ETSAL++ N++ AF +LT+IY ++S+KA
Sbjct: 122 MIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKA 181
Query: 183 LEIGDDPAALP---KGQTINVGTKDDVSAVKKVGCCSN 217
L + A++ +G TINV D + GCCS+
Sbjct: 182 LAAQEAAASITHPGQGTTINV--SDTSGDSNRRGCCSS 217
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/192 (70%), Positives = 160/192 (83%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+ +SKSTIGVEFATRS+ D K+VKAQIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+++ TF NV RWLKELRDH DS+IV+MLVGNK+
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLRAV T++A FA F+ETSAL++ NVE AF ++LT IYR+VS K+L+ D+
Sbjct: 126 DLKHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSLDAADE 185
Query: 189 PAALPKGQTINV 200
+G T+ V
Sbjct: 186 VIQPSRGTTVTV 197
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/215 (65%), Positives = 163/215 (75%), Gaps = 8/215 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A DDY YLFKVVLIGDSGVGKSNLLSRF RNEF+ +SKSTIGVEFATRSI D K +K+Q
Sbjct: 2 ASDDYHYLFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ TFE+VERWLKELRDH D++IVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADASIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE- 184
NK+DL+ LRAV TE+A FA R FMETSAL+ NVE AF ++L +Y+VVS KA+E
Sbjct: 122 NKSDLKSLRAVPTEEAKEFATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAMEN 181
Query: 185 ----IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ P A G++I V + CC
Sbjct: 182 ESNRVATGPGA---GKSITVAPTTTNAKPASGKCC 213
>gi|261194555|ref|XP_002623682.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239588220|gb|EEQ70863.1| Rab1a [Ajellomyces dermatitidis SLH14081]
gi|239613500|gb|EEQ90487.1| Rab1a [Ajellomyces dermatitidis ER-3]
Length = 210
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 165/213 (77%), Gaps = 7/213 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+D+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQ
Sbjct: 2 ANDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR+H D NIVIMLVG
Sbjct: 62 IWDTAGQERYRAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE- 184
NK D +H+RA+ T+ FAE F+ETSAL++ NVE AF +LT+IYR+VS KALE
Sbjct: 122 NKIDQKHVRAIKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALEN 181
Query: 185 --IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G +P L + + + D A +K CC
Sbjct: 182 GTSGQNP--LGDRKVVEITKSQDADAKQK--CC 210
>gi|83765744|dbj|BAE55887.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 221
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/200 (69%), Positives = 159/200 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLLSRFTRNEF+L++KSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 22 MVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERY 81
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSNIVIMLVGNK+DLRHLRA
Sbjct: 82 RAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLRA 141
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKG 195
V TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+ GD A
Sbjct: 142 VPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSGQAGLGD 201
Query: 196 QTINVGTKDDVSAVKKVGCC 215
+ V K GCC
Sbjct: 202 RRPVVDINPSQDPETKQGCC 221
>gi|115396826|ref|XP_001214052.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
gi|114193621|gb|EAU35321.1| GTP-binding protein ypt3 [Aspergillus terreus NIH2624]
Length = 206
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/202 (69%), Positives = 161/202 (79%), Gaps = 3/202 (1%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQER 74
K L DSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQIWDTAGQER
Sbjct: 7 KPQLTDDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQER 66
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
YRAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSNIVIMLVGNK+DLRHLR
Sbjct: 67 YRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSDLRHLR 126
Query: 135 AVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAAL-P 193
AV TE+A FA N F+ETSAL++ NVE AF +LT+IYR+VS KAL+ GD A L
Sbjct: 127 AVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSQAPLGD 186
Query: 194 KGQTINVGTKDDVSAVKKVGCC 215
+ I+V D + K GCC
Sbjct: 187 RRPVIDVSQTPDSES--KQGCC 206
>gi|323451541|gb|EGB07418.1| hypothetical protein AURANDRAFT_6384 [Aureococcus anophagefferens]
Length = 186
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 132/177 (74%), Positives = 157/177 (88%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSL+SKSTIGVEFAT+SI + K +KAQI
Sbjct: 5 DNEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIVAEGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+H TFENVERWLKELRDH ++NIV+MLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDLTKHATFENVERWLKELRDHAEANIVVMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
K+DL+ RAV TE+A A AE+ N F+ETSAL++ V+ AF +LT+IYR++++K L
Sbjct: 125 KSDLKPQRAVPTEEAMAMAEQHNLAFIETSALDASGVDIAFQNILTEIYRLMNKKQL 181
>gi|47203604|emb|CAF87898.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 164/204 (80%), Gaps = 6/204 (2%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGNK+DLRHLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA--ALP 193
V T++A AFAE+ F+ETSAL+S VE AF +LT+IYR+VS+K +I D A P
Sbjct: 121 VPTDEARAFAEKNTLSFIETSALDSTKVEEAFKNILTEIYRIVSQK--QIADRSAHDESP 178
Query: 194 KGQTINVGTKDDVSAVK--KVGCC 215
+++ + + K+ CC
Sbjct: 179 GNNVVDISLPPTTDSQRGDKLPCC 202
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 167/209 (79%), Gaps = 4/209 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF T+++ D K VKAQIWDTA
Sbjct: 14 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQIWDTA 73
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V +WL+ELRDH D+NIVIML+GNK+DL
Sbjct: 74 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNNIVIMLIGNKSDL 133
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LRAV TEDA FA++EN FFMETSALE+ NVE+AF VLT+IYRV+S+KAL +
Sbjct: 134 GTLRAVPTEDAKEFAQKENLFFMETSALEATNVESAFLSVLTEIYRVISKKALIANEQES 193
Query: 189 --PAALPKGQTINVGTKDDVSAVKKVGCC 215
++L KG I V ++ VS + CC
Sbjct: 194 GGSSSLLKGTNIVVPEQEPVSGGRSFSCC 222
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/214 (64%), Positives = 169/214 (78%), Gaps = 11/214 (5%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LLSRF R+EF+LESKSTIGVEF TR+I D K +KAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTA 68
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+TR TFE+V RWL+ELR+H D+N+VIM+VGNK+DL
Sbjct: 69 GQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDL 128
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
+ RA+S E+ F+E+E +FMETSAL+S NVE AFT VLT+IY++VS+K+L DDP
Sbjct: 129 SNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLA-ADDPN 187
Query: 190 -------AALPKGQTINVGTKDDVSAVKKVGCCS 216
+P G I + D+++AVKK CCS
Sbjct: 188 GGLANVMPPVPSGNKILL--DDELTAVKKRACCS 219
>gi|116667013|pdb|2D7C|A Chain A, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
gi|116667014|pdb|2D7C|B Chain B, Crystal Structure Of Human Rab11 In Complex With Fip3 Rab-
Binding Domain
Length = 167
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 134/167 (80%), Positives = 150/167 (89%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWD
Sbjct: 1 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAG ERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVI LVGNK+
Sbjct: 61 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIXLVGNKS 120
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DLRHLRAV T++A AFAE+ F+ETSAL+S NVE AF +LT+IY
Sbjct: 121 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY 167
>gi|226510193|ref|NP_001148694.1| LOC100282310 [Zea mays]
gi|194698036|gb|ACF83102.1| unknown [Zea mays]
gi|195621456|gb|ACG32558.1| ras-related protein RGP2 [Zea mays]
gi|413944911|gb|AFW77560.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 175/220 (79%), Gaps = 8/220 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++ D K
Sbjct: 1 MGG-RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELRDH DS+IV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM+VGNK+DL HLRA+S ++ A AE+E FF+ETSA+E++NVE AF ++T++Y +V+R
Sbjct: 120 IMMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEQAFQTIMTEVYGIVNR 179
Query: 181 K---ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
K A E A+LP +G+ I++ D + K CCS
Sbjct: 180 KALAAKEAAAATASLPSQGKIISI---DSTAGNTKRACCS 216
>gi|195498398|ref|XP_002096506.1| GE25707 [Drosophila yakuba]
gi|194182607|gb|EDW96218.1| GE25707 [Drosophila yakuba]
Length = 288
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 140/205 (68%), Positives = 162/205 (79%), Gaps = 12/205 (5%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQIWDTAGQERYR
Sbjct: 89 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQERYR 148
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 136
AITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGNK+DLRHLR+V
Sbjct: 149 AITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRSV 208
Query: 137 STEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKGQ 196
T++A FAER F+ETSAL+S NVE AF +LT+IYR+VS+K + DP P+G
Sbjct: 209 PTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIR---DP---PEGD 262
Query: 197 TIN------VGTKDDVSAVKKVGCC 215
I + K V+A + CC
Sbjct: 263 VIRPSNVEPIDVKPTVTADVRKQCC 287
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/55 (89%), Positives = 52/55 (94%), Gaps = 2/55 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI 55
MGA +D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI
Sbjct: 1 MGA--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 53
>gi|195569261|ref|XP_002102629.1| GD19397 [Drosophila simulans]
gi|194198556|gb|EDX12132.1| GD19397 [Drosophila simulans]
Length = 198
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/172 (78%), Positives = 151/172 (87%), Gaps = 2/172 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA +D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K
Sbjct: 1 MGA--REDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIV
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
IMLVGNK+DLRHLR+V T++A FAER F+ETSAL+S NVE AF +LT
Sbjct: 119 IMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILT 170
>gi|115462975|ref|NP_001055087.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|109940138|sp|Q40723.2|RGP2_ORYSJ RecName: Full=Ras-related protein RGP2; AltName: Full=GTP-binding
regulatory protein RGP2
gi|46485881|gb|AAS98506.1| putative GTP-binding protein Rab11 [Oryza sativa Japonica Group]
gi|113578638|dbj|BAF17001.1| Os05g0280200 [Oryza sativa Japonica Group]
gi|125551654|gb|EAY97363.1| hypothetical protein OsI_19285 [Oryza sativa Indica Group]
gi|149390917|gb|ABR25476.1| gtp-binding regulatory protein rgp2 [Oryza sativa Indica Group]
gi|222630958|gb|EEE63090.1| hypothetical protein OsJ_17898 [Oryza sativa Japonica Group]
Length = 217
Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 140/220 (63%), Positives = 175/220 (79%), Gaps = 8/220 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++ + K
Sbjct: 1 MGG-RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELRDH DS+IV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM+VGNK+DL HLRAVS ++ A AE+E FF+ETSA+E++NVE AF ++T++Y +V+R
Sbjct: 120 IMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNR 179
Query: 181 K---ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
K A E A LP +G+TI++ D + K CCS
Sbjct: 180 KALAAKEAAAASAPLPSQGKTISI---DSAAGNTKRACCS 216
>gi|156102877|ref|XP_001617131.1| small GTPase rab11 [Plasmodium vivax Sal-1]
gi|148806005|gb|EDL47404.1| small GTPase rab11, putative [Plasmodium vivax]
Length = 230
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 171/202 (84%), Gaps = 3/202 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQ 65
+D YDYLFK+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+ ++KI+KAQ
Sbjct: 5 EDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELRD+ DSNIVI+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLR ++ +AT FA++E F+ETSALE+ NVE AF ++L +IY V +K
Sbjct: 125 NKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTK 184
Query: 186 GDDPAAL-PKGQTINVGTKDDV 206
+D ++ P+G+ INV TK+ +
Sbjct: 185 NEDSMSIQPRGKKINV-TKEKI 205
>gi|67516131|ref|XP_657951.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
gi|40746597|gb|EAA65753.1| hypothetical protein AN0347.2 [Aspergillus nidulans FGSC A4]
Length = 237
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/238 (61%), Positives = 172/238 (72%), Gaps = 30/238 (12%)
Query: 6 ADDDYD-------YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCD 58
A+D+YD +LFKVVLIGDSG GKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D
Sbjct: 2 ANDEYDVSPRPLTFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD 61
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN 118
K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+++H T++NV RWLKELRDH DSN
Sbjct: 62 SKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSN 121
Query: 119 IVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLT------ 172
IVIMLVGNK+DLRHLRAV TE+A FA N F+ETSAL++ NVE AF +LT
Sbjct: 122 IVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTGIAPVG 181
Query: 173 --------------QIYRVVSRKALEIGDDPAAL-PKGQTINVGTKDDVSAVKKVGCC 215
+IYR+VS KALE A++ + Q I++ D K GCC
Sbjct: 182 ISKRRSLTAILFFVEIYRIVSSKALEGESGGASVGERRQIIDIEKTQDTE--NKGGCC 237
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 168/214 (78%), Gaps = 11/214 (5%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LLSRF R+EF+LESKSTIGVEF TR+I D K +KAQIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTA 68
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+TR TFE+V RWL+ELR+H D+N+VIM+VGNK+DL
Sbjct: 69 GQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDL 128
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
+ R +S E+ F+E+E +FMETSAL+S NVE AFT VLT+IY++VS+K+L DDP
Sbjct: 129 SNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLA-ADDPN 187
Query: 190 -------AALPKGQTINVGTKDDVSAVKKVGCCS 216
+P G I + D+++AVKK CCS
Sbjct: 188 GGLANVMPPVPSGNKILL--DDELTAVKKRACCS 219
>gi|66826405|ref|XP_646557.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548673|sp|P36412.1|RB11A_DICDI RecName: Full=Ras-related protein Rab-11A
gi|414965|gb|AAA80149.1| Rab11 [Dictyostelium discoideum]
gi|60474032|gb|EAL71969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 214
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 167/215 (77%), Gaps = 1/215 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M + + ++YDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATR+I+ + K
Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQ+WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERW+ ELR++ D NI
Sbjct: 61 TIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIE 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK+DLRHLR VST++A F+E+ F+ETSAL+S NVE AF +LTQIY ++SR
Sbjct: 121 IMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSR 180
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ G +TI + T + A K GCC
Sbjct: 181 PSHSTGPQTTIDSNTETIILPTTSEPPAAKS-GCC 214
>gi|242087345|ref|XP_002439505.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
gi|241944790|gb|EES17935.1| hypothetical protein SORBIDRAFT_09g008430 [Sorghum bicolor]
Length = 217
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 174/220 (79%), Gaps = 8/220 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++ D K
Sbjct: 1 MGG-RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FENV RWL+ELRDH DS+IV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVHRWLRELRDHADSSIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM+VGNK+DL HLRA+S ++ A AE+E FF+ETSA+E++NVE AF ++T++Y +V+R
Sbjct: 120 IMMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNR 179
Query: 181 KALEIGDDPAAL----PKGQTINVGTKDDVSAVKKVGCCS 216
KAL + A +G+TI++ D + K CCS
Sbjct: 180 KALAAKEAAATTATLPSQGKTISI---DSTAGNTKRACCS 216
>gi|444721666|gb|ELW62390.1| Ras-related protein Rab-11A [Tupaia chinensis]
Length = 236
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/229 (62%), Positives = 163/229 (71%), Gaps = 27/229 (11%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 66
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRA
Sbjct: 67 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 126
Query: 136 VSTEDATAFAER----------------ENTF-----------FMETSALESMNVENAFT 168
V T++A AFAE+ E F F+ETSAL+S NVE AF
Sbjct: 127 VPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEKNGLSFIETSALDSTNVEAAFQ 186
Query: 169 EVLTQIYRVVSRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+LT+IYR+VS+K + + P + + KV CC N
Sbjct: 187 TILTEIYRIVSQKQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQN 235
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 168/211 (79%), Gaps = 9/211 (4%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF+RNEFS++SK+TIGVEF T+++ D K VKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL------E 184
LRAV TEDA FAEREN FFMETSALES NVE AF +LT+IYR++S+K+L +
Sbjct: 133 GSLRAVPTEDAQEFAERENLFFMETSALESTNVETAFFTILTEIYRIISKKSLAAGEEID 192
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
IG +P AL KG +I V +D S K GCC
Sbjct: 193 IGSNP-ALFKGTSIVVPGQDQDSGRK--GCC 220
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 144/225 (64%), Positives = 163/225 (72%), Gaps = 15/225 (6%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+A DDYDYLFKVVL+GDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+ D K +KA
Sbjct: 11 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKA 70
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS-NIVIML 123
QIWDTAGQERYRAITSAYYRGA GALLVYDVTR TFE+ RWL+ELRDH D +ML
Sbjct: 71 QIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVML 130
Query: 124 VGNKADL---------RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
VGNK DL H RAV DA A AERE F+ETSAL++ NV+ AF +LT+I
Sbjct: 131 VGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEI 190
Query: 175 YRVVSRKAL---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
YR VSRKAL GDD A+ +GQ I V D + CC+
Sbjct: 191 YRAVSRKALAASSAGDDAGAVGEGQAIQVSASDSAGLTTR--CCA 233
>gi|212723196|ref|NP_001131362.1| uncharacterized protein LOC100192685 [Zea mays]
gi|194691316|gb|ACF79742.1| unknown [Zea mays]
gi|195612658|gb|ACG28159.1| ras-related protein RGP2 [Zea mays]
gi|413948932|gb|AFW81581.1| Ras protein RGP2 [Zea mays]
Length = 217
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 174/220 (79%), Gaps = 8/220 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++ D K
Sbjct: 1 MGG-RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAV ALLVYD+T+ +F+NV RWL+ELRDH DS+IV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM+VGNK+DL HLRA+S ++ A AE+E FF+ETSA+E++NVE AF ++T++Y +V+R
Sbjct: 120 IMMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETSAMEAINVEEAFQTIITEVYGIVNR 179
Query: 181 K---ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
K A E A LP +G+TI++ D + K CCS
Sbjct: 180 KALAAKEAAATAAPLPSQGKTISI---DSNAGNTKKACCS 216
>gi|403419077|emb|CCM05777.1| predicted protein [Fibroporia radiculosa]
Length = 237
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/232 (60%), Positives = 164/232 (70%), Gaps = 25/232 (10%)
Query: 9 DYDYLFKVVLIGDSGVGKS-------------------------NLLSRFTRNEFSLESK 43
++DYLFKVVLIGDSGVGKS NLLSRFTRNEF+LE+K
Sbjct: 6 NFDYLFKVVLIGDSGVGKSCVPLRACLATSRLIKFILSFVSQHSNLLSRFTRNEFNLETK 65
Query: 44 STIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFEN 103
STIGVEFATRSI D K +KAQIWDTAGQERYRAIT+AYYRGAVGALLVYD+ +H T+ +
Sbjct: 66 STIGVEFATRSITVDGKTLKAQIWDTAGQERYRAITAAYYRGAVGALLVYDIAKHGTYVD 125
Query: 104 VERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNV 163
V RWLKELRDH DSNIVIMLVGNK+DL+HLRAV T++A FA F+ETSAL++ NV
Sbjct: 126 VTRWLKELRDHADSNIVIMLVGNKSDLKHLRAVPTDEAKTFATENGLSFIETSALDASNV 185
Query: 164 ENAFTEVLTQIYRVVSRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
E+AF +LT IYR+VS K+LE DP G +I V D + + CC
Sbjct: 186 ESAFQTILTDIYRIVSSKSLEQSSDPIKPSSGDSITVAPSVDSNTNQNSKCC 237
>gi|21217443|gb|AAM33785.1| Rab11 [Periplaneta americana]
Length = 204
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 132/168 (78%), Positives = 150/168 (89%)
Query: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRA 77
LIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRA
Sbjct: 4 LIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRA 63
Query: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 137
ITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGNK+DLRHLRAV
Sbjct: 64 ITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRHLRAVP 123
Query: 138 TEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
T++A AFAER F+ETSAL+S NVE AF +LT+IYR+VS+K + I
Sbjct: 124 TDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIVI 171
>gi|389586140|dbj|GAB68869.1| small GTPase rab11 [Plasmodium cynomolgi strain B]
Length = 216
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 167/196 (85%), Gaps = 2/196 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQ 65
+D YDYLFK+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+ ++KI+KAQ
Sbjct: 5 EDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELRD+ DSNIVI+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLR ++ +AT FA++E F+ETSALE+ NVE AF ++L +IY V +K
Sbjct: 125 NKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTK 184
Query: 186 GDDPAAL-PKGQTINV 200
+D ++ P+G+ INV
Sbjct: 185 NEDSMSIQPRGKKINV 200
>gi|449489778|ref|XP_002187627.2| PREDICTED: ras-related protein Rab-11A-like [Taeniopygia guttata]
Length = 232
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 132/202 (65%), Positives = 160/202 (79%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D+K VKAQIWDTAGQERY
Sbjct: 30 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERY 89
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +++T+EN ERWLKEL+DH D+NIVIMLVGNK+DLRHLRA
Sbjct: 90 RAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRA 149
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKG 195
V T++A +FAE+ F+ETSAL+S NVE AF +L++IYR+VS++ + + P
Sbjct: 150 VPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQAESEFGPSS 209
Query: 196 QTINVGTKDDVSAVKKVGCCSN 217
+ ++ CC N
Sbjct: 210 TIEPIQVLPTQQEGRQAPCCQN 231
>gi|168016234|ref|XP_001760654.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162688014|gb|EDQ74393.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 221
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 136/214 (63%), Positives = 168/214 (78%), Gaps = 4/214 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+ DY+FKVVLIGDS VGKS LLSRF+RNEFSLESK+TIGVEF TR+I D K +KAQI
Sbjct: 9 DNKIDYVFKVVLIGDSAVGKSQLLSRFSRNEFSLESKATIGVEFQTRTIVVDHKTIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGAVGA++VYD+T+ +F++V RWL+ELR H D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMVVYDITKEQSFDHVLRWLEELRAHADANIVIMLIGN 128
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL +LR V T+ A +AE++ F+ETSA+ES NVE AF VL++IY+ VS+KAL I
Sbjct: 129 KSDLSNLRQVETDTAREYAEKQGLSFLETSAMESTNVETAFFTVLSEIYKTVSKKAL-IA 187
Query: 187 DD---PAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D+ A L G I + KDDV KK GCCS+
Sbjct: 188 DENQGGAPLLPGTKITLTDKDDVIGTKKAGCCSS 221
>gi|218204|dbj|BAA02437.1| GTP binding protein [Oryza sativa Japonica Group]
gi|446772|prf||1912297A rgp2 gene
Length = 217
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/220 (63%), Positives = 176/220 (80%), Gaps = 8/220 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG R D +Y YLFK+VLIGD+GVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++ + K
Sbjct: 1 MGG-RVDHEYSYLFKMVLIGDTGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +F+NV RWL+ELRDH DS+IV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM+VGNK+DL HLRAVS ++ A AE+E FF+ETSA+E++NVE AF ++T++Y +V+R
Sbjct: 120 IMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNR 179
Query: 181 KALEIGDDPA---ALP-KGQTINVGTKDDVSAVKKVGCCS 216
KAL + A LP +G+TI++ D + K CCS
Sbjct: 180 KALAAKEAAAASRPLPSQGKTISI---DSAAGNTKRACCS 216
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 164/210 (78%), Gaps = 5/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVL+GDS VGK+ LL+RF +N+F+++SK+TIGVEF T+++ D K VKAQIWDTA
Sbjct: 13 DYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYDVTR +F+N+ +WL+ELR H D NIV+ML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKNIVVMLIGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
LRAV TEDA FA+REN FFMETSALES NVE AF +LT+IYR+VS+K L DD
Sbjct: 133 GTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLVSKKTLTANDDAD 192
Query: 190 ----AALPKGQTINVGTKDDVSAVKKVGCC 215
+ L KG I V ++D + KK GCC
Sbjct: 193 PSGISGLLKGTKIIVPSQDINAGEKKGGCC 222
>gi|221061061|ref|XP_002262100.1| small GTPase Rab11 [Plasmodium knowlesi strain H]
gi|193811250|emb|CAQ41978.1| small GTPase Rab11, putative [Plasmodium knowlesi strain H]
Length = 216
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/212 (64%), Positives = 173/212 (81%), Gaps = 3/212 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQ 65
+D YDYLFK+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+ ++KI+KAQ
Sbjct: 5 EDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELRD+ DSNIVI+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLR ++ +AT FA++E F+ETSALE+ NVE AF ++L +IY V +K
Sbjct: 125 NKSDLKHLRVINDNEATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQGTK 184
Query: 186 GDDPAAL-PKGQTI-NVGTKDDVSAVKKVGCC 215
+D ++ P+G+ I D+ ++ KK CC
Sbjct: 185 NEDSMSIQPRGKKINVDDDNDENNSKKKSKCC 216
>gi|330792766|ref|XP_003284458.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
gi|325085601|gb|EGC39005.1| rab11A, RAB family GTPase [Dictyostelium purpureum]
Length = 217
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 165/211 (78%), Gaps = 4/211 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+ ++YDYL+K+VLIGDSGVGKSNLLSRFTRNEFSLE+KSTIGVEFATR+I+ + K +KAQ
Sbjct: 5 SQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
+WDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERWL ELR++ D NI IMLVG
Sbjct: 65 VWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIEIMLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE- 184
NK+DLRHLR VST++A F+E+ F+ETSAL+S NVE AF +LTQIY ++SR +
Sbjct: 125 NKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHLMSRPSHGP 184
Query: 185 -IGDDPAALPKGQTINVGTKDDVSAVKKVGC 214
I D+P A G I+ +K GC
Sbjct: 185 IISDEPPA--PGVQIDPSEPSSTQGGQKSGC 213
>gi|414589235|tpg|DAA39806.1| TPA: ras protein RGP1 [Zea mays]
Length = 226
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF RN+F+L+SK+TIGVEF TR++ D + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
LRAV EDA FAEREN FFMETSALE++NVENAF VLT+IYR VS+K L ++P
Sbjct: 135 GTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPD 194
Query: 190 ----AALPKGQTINVGTKDDVSAVKKVGCCSN 217
++L KG I V ++ S +K C S+
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPSTLKATCCMSS 226
>gi|358055772|dbj|GAA98117.1| hypothetical protein E5Q_04800 [Mixia osmundae IAM 14324]
Length = 274
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 145/167 (86%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YD LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI D K +KAQIWD
Sbjct: 41 EYDLLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVDTKTIKAQIWD 100
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+ +H T+ NV+RWLKEL+DH DSNIVIMLVGNK+
Sbjct: 101 TAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVQRWLKELKDHADSNIVIMLVGNKS 160
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DLRHLRAV TE+A FA E F+ETSAL++ NVENAF +LT Y
Sbjct: 161 DLRHLRAVPTEEAKQFATDEGLSFIETSALDASNVENAFQTILTGPY 207
>gi|238007236|gb|ACR34653.1| unknown [Zea mays]
Length = 217
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 8/220 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++ D K
Sbjct: 1 MGG-RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQIDGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAV ALLVYD+T+ +F+NV RWL+ELRDH DS+IV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVAALLVYDITKRQSFDNVHRWLRELRDHADSSIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IM+VGNK+DL HLRA+S ++ A AE+E FF+ET A+E++NVE AF ++T++Y +V+R
Sbjct: 120 IMMVGNKSDLIHLRAISEDEGKALAEKEGLFFLETLAMEAINVEEAFQTIITEVYGIVNR 179
Query: 181 K---ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
K A E A LP +G+TI++ D + K CCS
Sbjct: 180 KALAAKEAAATAAPLPSQGKTISI---DSNAGNTKKACCS 216
>gi|225450193|ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product [Vitis vinifera]
Length = 226
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 166/219 (75%), Gaps = 7/219 (3%)
Query: 4 YRAD--DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
Y+ D DY+FKVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF T+++ D K
Sbjct: 5 YKGDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVIDHKT 64
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVI
Sbjct: 65 VKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVI 124
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
MLVGNK+DL L+AV TEDA FAEREN FFMETSALE+ NVE AF VLT+IYR++S+K
Sbjct: 125 MLVGNKSDLGTLQAVPTEDAKEFAERENLFFMETSALEATNVETAFLSVLTEIYRIISKK 184
Query: 182 ALEIGDD-----PAALPKGQTINVGTKDDVSAVKKVGCC 215
L ++ ++L KG I V K+ S K CC
Sbjct: 185 TLVANEEVESGGNSSLLKGTKIIVPGKEPKSEGSKYNCC 223
>gi|432915693|ref|XP_004079205.1| PREDICTED: ras-related protein Rab-11B-like [Oryzias latipes]
Length = 218
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 164/213 (76%), Gaps = 2/213 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--E 184
K+DLRHLRAV T++A AFA + +T +++ + F+ T+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFAGNNHPKKTKTPYVQAFGISALFSFSYTEIYRIVSQKQIAER 184
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+D + I+V D K+ CC N
Sbjct: 185 SANDESPGNNVVDISVPPTTDGQRGSKLQCCQN 217
>gi|68076363|ref|XP_680101.1| small GTPase Rab11 [Plasmodium berghei strain ANKA]
gi|56500982|emb|CAH98214.1| small GTPase Rab11, putative [Plasmodium berghei]
Length = 209
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 167/209 (79%), Gaps = 3/209 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQIWD 68
+ + + VVLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+ +DKI+KAQIWD
Sbjct: 1 FSFFYLVVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWD 60
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN+E+WLKELRD+ DSNIVI+LVGNK+
Sbjct: 61 TAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKS 120
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+HLR ++ DAT FA++E F+ETSALE+ NVE AF ++L +IY V +K +D
Sbjct: 121 DLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSED 180
Query: 189 PAAL-PKGQTINVGTKDDVSAVK-KVGCC 215
+ P+G+ INV +D K K CC
Sbjct: 181 NVNIQPRGKKINVDNDNDEDEKKTKTKCC 209
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 167/210 (79%), Gaps = 5/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF+RN+F+++SK+TIGVEF T+++ D+K VKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D+NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD--D 188
L+AV TEDA FA+REN FFMETSALES NVE AF +LT+IYR++S+K L D D
Sbjct: 133 GTLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTANDEAD 192
Query: 189 P---AALPKGQTINVGTKDDVSAVKKVGCC 215
P + L KG I V +D + KK GCC
Sbjct: 193 PGGGSGLLKGTRIIVPNQDASAYEKKGGCC 222
>gi|255544246|ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 132/209 (63%), Positives = 164/209 (78%), Gaps = 3/209 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF T++I D K VKAQIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVVDHKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V +WL+ELR+H D+NIVIMLVGNK+DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGNKSDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
LRAV EDA FA++EN FFMETSALE+ NVE+AF VLT+IYRVVS+K+L D+
Sbjct: 133 ESLRAVPIEDAKEFAQKENLFFMETSALEATNVESAFISVLTEIYRVVSKKSLVANDEYG 192
Query: 191 ---ALPKGQTINVGTKDDVSAVKKVGCCS 216
+L KG I + ++ CCS
Sbjct: 193 GNNSLLKGNKIVIPGQEPEMQATNSSCCS 221
>gi|242044174|ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 166/212 (78%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++ D + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
LR+V+TEDA FAEREN FFMETSALE++NVENAF VLT+IYRVVS+K L ++
Sbjct: 135 GTLRSVATEDAKEFAERENLFFMETSALEAVNVENAFMTVLTEIYRVVSKKNLVANEESD 194
Query: 190 ----AALPKGQTINVGTKDDVSAVKKVGCCSN 217
++L KG I V ++ K C S+
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPPTSKATCCMSS 226
>gi|78714212|gb|ABB51088.1| Small GTPase Rab11 [Gracilaria lemaneiformis]
Length = 221
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 133/200 (66%), Positives = 160/200 (80%), Gaps = 1/200 (0%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYR 76
VL S + KSNLLSRFTRNEFSLESKSTIGVEFATRSI+C+ KI+KAQIWDTAGQERYR
Sbjct: 22 VLTVPSFLSKSNLLSRFTRNEFSLESKSTIGVEFATRSIQCEGKIIKAQIWDTAGQERYR 81
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 136
AITSAYYRGAVGALLVYD+T+ +F+NV+RWLKEL+DH D+NIVIMLVGNK+DL+HL+AV
Sbjct: 82 AITSAYYRGAVGALLVYDITKKDSFDNVQRWLKELKDHADANIVIMLVGNKSDLQHLKAV 141
Query: 137 STEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKG- 195
+T+DA+AFAE F+ETSAL++ NVE AF +L++IYR+ S+KALE G P
Sbjct: 142 TTDDASAFAESNGLSFIETSALDNSNVEEAFRSILSEIYRLGSKKALEKGSTSNFAPNAT 201
Query: 196 QTINVGTKDDVSAVKKVGCC 215
QTI + D +K CC
Sbjct: 202 QTIVINPPADEGKTEKAKCC 221
>gi|302505565|ref|XP_003014489.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|302656407|ref|XP_003019957.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
gi|291178310|gb|EFE34100.1| hypothetical protein ARB_07051 [Arthroderma benhamiae CBS 112371]
gi|291183734|gb|EFE39333.1| hypothetical protein TRV_06003 [Trichophyton verrucosum HKI 0517]
Length = 230
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/231 (63%), Positives = 172/231 (74%), Gaps = 23/231 (9%)
Query: 6 ADDDYDYLFK-------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCD 58
A+D+YD VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D
Sbjct: 2 ANDEYDREIADSVGTCIVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVD 61
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN 118
K +K+QIWDTAGQERYRAITSAYYRGAVGALLVYDV++H T+ENV RWLKELRDH DSN
Sbjct: 62 SKTIKSQIWDTAGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSN 121
Query: 119 IVIMLVGNKADLRHLRAVSTEDATAFAERE---------NTFFMETSALESMNVENAF-- 167
IVIMLVGNK+DLRHLRAV TE+A FA + N F+ETSAL++ NVE AF
Sbjct: 122 IVIMLVGNKSDLRHLRAVPTEEAKQFAIPQLTLMVLGENNLSFIETSALDASNVELAFQN 181
Query: 168 --TEVLTQIYRVVSRKALEIGDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
T++L +I+R+VS KALE GD A L + + + D + KK GCC
Sbjct: 182 ILTDLLAEIFRIVSSKALESGDSSANQLGDRKVVEITKTPD--SEKKQGCC 230
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 135/212 (63%), Positives = 163/212 (76%), Gaps = 6/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ D K VKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVIML+GNK+DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKSDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LRAV TEDA FAEREN FFMETSALE+ NVE AF VLT IY+++S+K L D
Sbjct: 133 GSLRAVPTEDAQEFAERENLFFMETSALEATNVETAFLTVLTDIYKIISKKTLTANTDTD 192
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ L KG I V D SA +K GCC +
Sbjct: 193 STGSSTLLKGTKIIVPGGPD-SAAQKGGCCGS 223
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 162/211 (76%), Gaps = 5/211 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF RNEF+L+SK+TIGVEF TR++ D + VKAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTA 75
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK+DL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDL 135
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LR V TEDA FAEREN FFMETSALES NVENAF VLT+IYR+VS+K L ++
Sbjct: 136 GTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVD 195
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCCS 216
++L KG I V ++ K C S
Sbjct: 196 SSGNSSLLKGTKIVVPGQEPAPPTKASCCMS 226
>gi|125563248|gb|EAZ08628.1| hypothetical protein OsI_30902 [Oryza sativa Indica Group]
Length = 164
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/146 (89%), Positives = 138/146 (94%)
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
RYRAITSAYYRGAVGAL+VYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKADLR
Sbjct: 19 HSRYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLR 78
Query: 132 HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAA 191
HLRAVS EDA FAERE+TFFMETSALESMNVE+AFTEVLTQIYRVVS+KAL+IGDDPAA
Sbjct: 79 HLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDPAA 138
Query: 192 LPKGQTINVGTKDDVSAVKKVGCCSN 217
P+GQTINVG KDDVSAVKK GCCS+
Sbjct: 139 PPRGQTINVGGKDDVSAVKKSGCCSS 164
>gi|295658933|ref|XP_002790026.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282109|gb|EEH37675.1| GTP-binding protein ypt3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 220
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 163/221 (73%), Gaps = 13/221 (5%)
Query: 6 ADDDYDYLFK----------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI 55
A+D+YD+LFK +VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI
Sbjct: 2 ANDEYDFLFKGIYLPGPVLRMVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSI 61
Query: 56 RCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT 115
+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR+H
Sbjct: 62 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELREHA 121
Query: 116 DSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
D NIVIMLVGNK D +H+R V T DA FA+ F+ETSAL++ NVE AF +LT+IY
Sbjct: 122 DKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTEIY 181
Query: 176 RVVSRKALEIGDDPA-ALPKGQTINVGTKDDVSAVKKVGCC 215
R+VS KALE G L + I + D A +K CC
Sbjct: 182 RIVSSKALENGSSSQNPLGDRKVIEISKTQDADAKQK--CC 220
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 138/212 (65%), Positives = 167/212 (78%), Gaps = 6/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF TR++ D K VKAQIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF++V RWL+ELR H D+NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
+LRAV EDA FA+RE FF+ETSALE++NVE+AF VLT IYR++S+KAL DD
Sbjct: 133 GNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIANDDQG 192
Query: 190 ---AALPKGQTINV-GTKDDVSAVKKVGCCSN 217
+AL G + V G + DVS K CCS+
Sbjct: 193 NGNSALLTGTKLVVPGEEQDVSTNNKY-CCSS 223
>gi|226531496|ref|NP_001146862.1| LOC100280470 [Zea mays]
gi|195604390|gb|ACG24025.1| ras-related protein RGP1 [Zea mays]
Length = 226
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 165/212 (77%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS GKS LL+RF RN+F+L+SK+TIGVEF TR++ D + VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAGGKSQLLARFARNQFNLDSKATIGVEFQTRTLNIDARNVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLMGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
LRAV EDA FAEREN FFMETSALE++NVENAF VLT+IYR VS+K L ++P
Sbjct: 135 GTLRAVPIEDAKEFAERENLFFMETSALEAINVENAFMTVLTEIYRTVSKKNLVANEEPD 194
Query: 190 ----AALPKGQTINVGTKDDVSAVKKVGCCSN 217
++L KG I V ++ S +K C S+
Sbjct: 195 SSGNSSLLKGTKIVVPGQEPPSTLKATCCMSS 226
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 165/211 (78%), Gaps = 9/211 (4%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF+RNEFS+ESK+TIGVEF TR++ D K +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL------E 184
LRAV TEDA FA+REN FFMETSAL+S NVE +F VLT+IYR+VS+K L E
Sbjct: 133 GTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGE 192
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G D ++L +G I V ++ S K GCC
Sbjct: 193 SGGD-SSLLQGTKIVVAGEETESKGK--GCC 220
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/220 (61%), Positives = 170/220 (77%), Gaps = 8/220 (3%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG R D +Y YLFK+VLIGDSGVGKSN+LSRFTRN FSL+SKSTIGVEFAT+S++ + K
Sbjct: 1 MGG-RVDHEYSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FENV RWL+ELRDH DS+IV
Sbjct: 60 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADSSIV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS- 179
IM+VGNK+DL HLR+VS + A AE+E FF+ETSA+E++NVE AF ++ ++Y +V+
Sbjct: 120 IMMVGNKSDLTHLRSVSEDQGKALAEKEGLFFLETSAMEAVNVEEAFQTIIAEVYGIVNK 179
Query: 180 --RKALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
A E A LP +G+ I++ D + K CCS
Sbjct: 180 KALAAKEAAAAAAPLPSQGKAISI---DSTAGNSKRACCS 216
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF RNEF ++SK+TIGVEF T+++ D+K VKAQIWDTA
Sbjct: 12 DYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVIML+GNK DL
Sbjct: 72 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKNIVIMLIGNKCDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LRAV EDA FA+REN FFMETSALES NVE AF VLT+IYRV+S+K L ++
Sbjct: 132 GSLRAVPIEDAQEFAQRENLFFMETSALESTNVETAFLTVLTEIYRVISKKTLTANEELD 191
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCC 215
+ L KG I V D A KK GCC
Sbjct: 192 TNGTSGLLKGTRIIVPGHDQAPA-KKGGCC 220
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/214 (62%), Positives = 161/214 (75%), Gaps = 5/214 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D DY+FKVV+IGDS VGKS +LSRF +NEFSL+SKSTIGVEF TR+I D+K +K QI
Sbjct: 9 DQRIDYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTIKTQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RWL+ELR H D+NIVIML+GN
Sbjct: 69 WDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIMLIGN 128
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--- 183
K DLR +RAV EDA FA+RE FF ETSALE++NVE AF LT+IYR+VSRKAL
Sbjct: 129 KCDLRDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKALTAN 188
Query: 184 --EIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
E + AAL + + V VKK CC
Sbjct: 189 EEERNGNAAALTGTKIALSSPEQPVMTVKKRSCC 222
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 165/211 (78%), Gaps = 9/211 (4%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF+RNEFS+ESK+TIGVEF TR++ D K +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL------E 184
LRAV TEDA FA+REN FFMETSAL+S NVE +F VLT+IYR+VS+K L E
Sbjct: 133 GTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGE 192
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G D ++L +G I V ++ S K GCC
Sbjct: 193 SGGD-SSLLQGTKIVVAGEETESKGK--GCC 220
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 131/209 (62%), Positives = 166/209 (79%), Gaps = 6/209 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF RNEFS++SK+TIGVEF T+++ D+K VKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELR H D NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
LRAV TEDA FA+REN FFMETSALE+ NVE AF +LT+IYR++S+K+L DD A
Sbjct: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDA 192
Query: 191 ----ALPKGQTINVGTKDDVSAVKKVGCC 215
+L KG I + ++ + K+ GCC
Sbjct: 193 DGNSSLLKGTRIIIPSEQESG--KRGGCC 219
>gi|417408504|gb|JAA50801.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 190
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/184 (73%), Positives = 152/184 (82%), Gaps = 7/184 (3%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLT------QIYRVVSRKALE-IGDD 188
V T++A AFAE+ N F+ETSAL+S NVE AF +LT +R SR +G
Sbjct: 121 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTGGPGPGGGHRNPSRPTKRGVGRA 180
Query: 189 PAAL 192
PA L
Sbjct: 181 PATL 184
>gi|224096151|ref|XP_002310552.1| predicted protein [Populus trichocarpa]
gi|222853455|gb|EEE91002.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 165/216 (76%), Gaps = 7/216 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ D K VKAQ
Sbjct: 10 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIG 129
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL RAV TEDA FA++E FF+ETSAL++ NVENAF VLT+I+ +V++K L
Sbjct: 130 NKSDLEDQRAVPTEDAKEFAQKEGLFFLETSALQATNVENAFMTVLTEIFNIVNKKNLVA 189
Query: 186 GDD-----PAALPKGQTINVGTKDDVSAVKKVGCCS 216
G+D PA+L + I G ++ A K CCS
Sbjct: 190 GEDQINGNPASLSGKKIIIPGPAQEIPAKSK--CCS 223
>gi|1405561|emb|CAA67153.1| FSGTP1 [Fagus sylvatica]
Length = 215
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 164/217 (75%), Gaps = 5/217 (2%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A RAD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+++ + + V
Sbjct: 2 ARRADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TFE V WLKELRDH DSNIVIM
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKPTTFEQV--WLKELRDHADSNIVIM 119
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTF-FMETSALESMNVENAFTEVLT-QIYRVVSR 180
L+GNK DL+H RAV TEDA F R+ F+ETSAL++ NVE AF +L + ++S+
Sbjct: 120 LIGNKTDLKHSRAVRTEDAQGFMLRKKALSFIETSALKATNVEKAFQTILCLRFTGIISK 179
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
K+L D+PA + + A K CCSN
Sbjct: 180 KSLS-SDEPAPSVIKEAVKHIVVGGSEANTKKPCCSN 215
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/210 (63%), Positives = 162/210 (77%), Gaps = 7/210 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LLSRF RNEFSL+SK+TIGVEF T+++ D K +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+GNK+DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGNKSDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LR V TEDA FA+ EN FMETSALE+ NVE AF +LT+IYRV+S+KAL D+
Sbjct: 133 GSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIANDETD 192
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCC 215
++L KG I V ++ +A GCC
Sbjct: 193 SGGSSSLLKGTKIVVPGQEPQAA--SSGCC 220
>gi|302781422|ref|XP_002972485.1| rab family GTPase [Selaginella moellendorffii]
gi|300159952|gb|EFJ26571.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/208 (64%), Positives = 164/208 (78%), Gaps = 8/208 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF+RNEF+LESK+TIGVEF TR++ D K +KAQIWDTA
Sbjct: 12 DYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGAVGAL+VYD+T+ TFE+V RWL+EL+ H D+NIV+MLVGNK+DL
Sbjct: 72 GQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI---GD 187
+LRAVS E+A AERE FFMETSALE+ NV++AF VLT+IYR+VS+K+L G
Sbjct: 132 GNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEGAGGS 191
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCC 215
+P G T+ + K + K GCC
Sbjct: 192 QQVPIP-GTTLLLSEKKE----SKTGCC 214
>gi|126645710|ref|XP_001388049.1| Rab11 [Cryptosporidium parvum Iowa II]
gi|126117137|gb|EAZ51237.1| Rab11, putative [Cryptosporidium parvum Iowa II]
Length = 220
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 137/216 (63%), Positives = 169/216 (78%), Gaps = 7/216 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+ YDYL+K+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI + K++KAQI
Sbjct: 5 DEHYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIITEGKVIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWLKELRDH D NIV++LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLR+LR V+ E+A AF+ERE ME SAL S NV+ AF +L++IY + S + L
Sbjct: 125 KSDLRNLRTVTQEEACAFSEREGMACMEASALNSSNVDEAFHRILSEIYTLRSERQLTAN 184
Query: 187 D---DPAALPKG-QTINVGT-KDDVSA--VKKVGCC 215
+ A LP G Q + V + D+++ KK CC
Sbjct: 185 QHDLNKATLPLGTQGVRVDPIRIDLNSKGSKKRSCC 220
>gi|291411545|ref|XP_002722062.1| PREDICTED: RAB11B, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 234
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 129/157 (82%), Positives = 143/157 (91%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 57 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 116
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGNK+DLRHLRA
Sbjct: 117 RAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA 176
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
V T++A AFAE+ N F+ETSAL+S NVE AF +LT
Sbjct: 177 VPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILT 213
>gi|67970463|dbj|BAE01574.1| unnamed protein product [Macaca fascicularis]
Length = 461
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 125/152 (82%), Positives = 139/152 (91%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSAL 158
K+DLRHLRAV T++A AFAE+ N F+ +L
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIRDLSL 156
>gi|302805127|ref|XP_002984315.1| rab family GTPase [Selaginella moellendorffii]
gi|300148164|gb|EFJ14825.1| rab family GTPase [Selaginella moellendorffii]
Length = 214
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/208 (64%), Positives = 164/208 (78%), Gaps = 8/208 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF+RNEF+LESK+TIGVEF TR++ D K +KAQIWDTA
Sbjct: 12 DYVFKVVLIGDSAVGKSQLLARFSRNEFTLESKATIGVEFQTRTMVVDHKTIKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRAITSAYYRGAVGAL+VYD+T+ TFE+V RWL+EL+ H D+NIV+MLVGNK+DL
Sbjct: 72 GQERYRAITSAYYRGAVGALVVYDITKRPTFEHVTRWLEELKVHADNNIVVMLVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI---GD 187
+LRAVS E+A AERE FFMETSALE+ NV++AF VLT+IYR+VS+K+L G
Sbjct: 132 GNLRAVSVEEAKDLAEREELFFMETSALEATNVDSAFFSVLTEIYRIVSKKSLSEGAGGS 191
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCC 215
+P G T+ + K + K GCC
Sbjct: 192 QQIPIP-GTTLLLSEKKE----SKTGCC 214
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 162/208 (77%), Gaps = 3/208 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF RNEFSL+SK+TIGVEF T+++ D+KI+KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKIIKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELR H D NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHADQNIVIMLIGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LRAV EDA A+REN FFMETSALES NVE F +LT+IYR+ ++K+L DD
Sbjct: 133 GSLRAVPMEDAEELAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTTSDDDI 192
Query: 189 -PAALPKGQTINVGTKDDVSAVKKVGCC 215
+ L KG I V ++ + KK GCC
Sbjct: 193 GGSGLLKGSRIIVPNQEIYNGGKKGGCC 220
>gi|294874898|ref|XP_002767142.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239868591|gb|EEQ99859.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 165/220 (75%), Gaps = 8/220 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A++DYDYLFKVVLIGDSGVGKSN+LSRFTR EF+LES+STIGVEFAT+S+R K+VKAQ
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FEN RWLKELR+H DS+IV+MLVG
Sbjct: 68 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL HLRAV ++A F + F+ETSALE+ NVE AF E+L IY+V S K +
Sbjct: 128 NKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPL 187
Query: 186 ---GDDPAALPKGQTINVGTKDDVSAVKKV-----GCCSN 217
D P+ + + + V + S +++ CC++
Sbjct: 188 RAGADTPSIEEQQERMRVQLEGATSGGQQIQTHHSNCCAS 227
>gi|294943805|ref|XP_002783965.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239896947|gb|EER15761.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 228
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 132/220 (60%), Positives = 165/220 (75%), Gaps = 8/220 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A++DYDYLFKVVLIGDSGVGKSN+LSRFTR EF+LES+STIGVEFAT+S+R K+VKAQ
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FEN RWLKELR+H DS+IV+MLVG
Sbjct: 68 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL HLRAV ++A F + F+ETSALE+ NVE AF E+L IY+V S K +
Sbjct: 128 NKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYKVNSSKPTPL 187
Query: 186 ---GDDPAALPKGQTINVGTKDDVSAVKKV-----GCCSN 217
D P+ + + + V + S +++ CC++
Sbjct: 188 RAGADTPSIEEQQERMRVQLEGATSGGQQIQTHHSKCCAS 227
>gi|209878955|ref|XP_002140918.1| Rab11 protein [Cryptosporidium muris RN66]
gi|209556524|gb|EEA06569.1| Rab11 protein, putative [Cryptosporidium muris RN66]
Length = 220
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 163/216 (75%), Gaps = 7/216 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+ YDYL+K+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI K++KAQI
Sbjct: 5 DEYYDYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIMTQGKVIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ +FENVERWLKELRDH D NIV++LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENVERWLKELRDHADPNIVVLLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL+HLRAV+ E+A F+E+E ME SAL S NVE AF +L++IY + S + +
Sbjct: 125 KSDLKHLRAVTQEEACMFSEKEGMACMEASALNSSNVEQAFHRILSEIYMLRSERQIANQ 184
Query: 187 DD--PAALPKG-QTINVGT----KDDVSAVKKVGCC 215
D LP G Q + V D +K CC
Sbjct: 185 HDLTKTTLPIGSQGVRVDPVRVDLDSKGLKRKSSCC 220
>gi|366993453|ref|XP_003676491.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
gi|342302358|emb|CCC70130.1| hypothetical protein NCAS_0E00600 [Naumovozyma castellii CBS 4309]
Length = 219
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 161/211 (76%), Gaps = 4/211 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I + K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WLKELRD+ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLKELRDNADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD- 187
DL HLRAV T +A FA F ETSAL S NV+ AF E++T IY++VS+ +++GD
Sbjct: 129 DLAHLRAVPTAEAKNFASENELLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 188 --DPAALPKGQTINV-GTKDDVSAVKKVGCC 215
+ AA PKG TI++ T ++ CC
Sbjct: 189 GNNAAAAPKGPTISLTPTPNENKKSSSSNCC 219
>gi|224086265|ref|XP_002335212.1| predicted protein [Populus trichocarpa]
gi|222833087|gb|EEE71564.1| predicted protein [Populus trichocarpa]
Length = 143
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/143 (89%), Positives = 136/143 (95%)
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+N VIMLVGNKADLRHLR
Sbjct: 1 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGNKADLRHLR 60
Query: 135 AVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPK 194
AV+TEDA FAERE+TFFMETSALESMNVENAFTEVLTQIYRVVSRKAL++GDD LPK
Sbjct: 61 AVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDVGDDSTYLPK 120
Query: 195 GQTINVGTKDDVSAVKKVGCCSN 217
GQTINVG++DDVSAVKK GCCS+
Sbjct: 121 GQTINVGSRDDVSAVKKAGCCSS 143
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 167/211 (79%), Gaps = 4/211 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +LSRF R+EFSL+SK+TIGVEF TR++ + K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF++V RWL+ELR+H D+NIVIMLVGNK DL
Sbjct: 68 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVGNKCDL 127
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL----EIG 186
+LRAV TEDA FA++E FF+ETSA+E+ NVE AF VLT+I+++VS+K+L + G
Sbjct: 128 DNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQDQG 187
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ A G +I V ++ + KK CC++
Sbjct: 188 NGNHASLSGTSIVVPGQEQDTTTKKKSCCTS 218
>gi|384493128|gb|EIE83619.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/213 (63%), Positives = 160/213 (75%), Gaps = 9/213 (4%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
DDYDYLFKVVLIGDSGVGK+NLL RFTRNEF+LESKSTIGVEFATRSI+ D+K++KAQIW
Sbjct: 3 DDYDYLFKVVLIGDSGVGKTNLLGRFTRNEFNLESKSTIGVEFATRSIQVDNKVIKAQIW 62
Query: 68 DTAGQERYRAITS-----AYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
DT Y TS +YYRGAVGALL YD+++H TFE+V RWLKELRDH DSNIVIM
Sbjct: 63 DTG---NYFISTSYTLNISYYRGAVGALLCYDISKHSTFESVSRWLKELRDHADSNIVIM 119
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DLRHLRAV T++A FA F+ETSAL++ NVE +F +LT+I+R+VS KA
Sbjct: 120 LVGNKSDLRHLRAVPTDEAKQFASENGLSFIETSALDATNVELSFQRILTEIHRIVSNKA 179
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
LE ++ GQTI V D GCC
Sbjct: 180 LETSNNAIKPTGGQTILVSQSPD-EPKPSGGCC 211
>gi|256053122|ref|XP_002570055.1| rab11 [Schistosoma mansoni]
gi|350645028|emb|CCD60258.1| rab11, putative [Schistosoma mansoni]
Length = 933
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 142/172 (82%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD YDYLFKVVL GDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D + +KAQI
Sbjct: 10 DDKYDYLFKVVLTGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+T+ TF N+E WL ELR H + +IVIMLVGN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRGHAEPDIVIMLVGN 129
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV 178
K DLRHLR + TEDA +AER FFMETSALES VENAF +L I+ V
Sbjct: 130 KCDLRHLRTILTEDAKLWAERHGLFFMETSALESTGVENAFYSILRTIFEAV 181
>gi|161761229|pdb|3BFK|A Chain A, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761230|pdb|3BFK|B Chain B, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761231|pdb|3BFK|C Chain C, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761232|pdb|3BFK|D Chain D, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
gi|161761233|pdb|3BFK|E Chain E, Crystal Structure Of Plasmodium Falciparum Rab11a In
Complex With Gdp
Length = 181
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 155/175 (88%), Gaps = 1/175 (0%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQI 66
D YDYLFK+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+ ++KI+KAQI
Sbjct: 2 DYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQI 61
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+T+ +FEN+E+WLKELRD+ DSNIVI+LVGN
Sbjct: 62 WDTAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGN 121
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL+HLR ++ DAT +A++E F+ETSALE+ NVE AF ++L +IY V +K
Sbjct: 122 KSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKK 176
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/212 (61%), Positives = 165/212 (77%), Gaps = 7/212 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF +N+FS++SK+TIGVEF T+++ D+K VKAQIWDTA
Sbjct: 99 DYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQIWDTA 158
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+N+ +WL+ELR H D NIV+ML+GNK DL
Sbjct: 159 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGNKCDL 218
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
LRAV TEDA FA+REN FFMETSALES NVE AF +LT+IYR++S+K L DD
Sbjct: 219 GTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTANDDAD 278
Query: 190 ----AALPKGQTINVGTKDDVSAVK--KVGCC 215
+ L KG I V +++ + K K GCC
Sbjct: 279 PSGISGLLKGTKIIVPSQEINAGEKKGKGGCC 310
>gi|308800306|ref|XP_003074934.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
gi|116061486|emb|CAL52204.1| Rab1 small GTPase from the Rab subfamily (IC) [Ostreococcus tauri]
Length = 214
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/209 (64%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
DDYDYLFKVVL+GDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I +KI+KAQIW
Sbjct: 6 DDYDYLFKVVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIEIQNKIIKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYDVT TF NVE+WL ELRDH D+NIVIMLVGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDVTNKDTFGNVEKWLSELRDHADANIVIMLVGNK 125
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
DL LR + A FA+ E+ F+ETSAL++ NVE AF L+ +Y VVS+ +
Sbjct: 126 CDLAQLRVIQAVKAQQFADTEDLIFIETSALDATNVETAFINALSNVYNVVSKNQ-AVNA 184
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+ + + ++I + +D K CCS
Sbjct: 185 EETSNKQNRSILISAAED-GFRPKSKCCS 212
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 161/210 (76%), Gaps = 7/210 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LLSRF RNEFSL+SK+TIGVEF T+++ D K +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+GNK+DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKNIVIMLIGNKSDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LR V TEDA FA+ EN FMETSALE+ NVE AF +LT+IYRV+S+KAL D+
Sbjct: 133 GSLRVVPTEDAKEFAQMENLSFMETSALEATNVEAAFNTILTEIYRVISKKALIANDETD 192
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCC 215
++L KG V ++ +A GCC
Sbjct: 193 SGGSSSLLKGTKXVVPGQEPQAA--SSGCC 220
>gi|118376340|ref|XP_001021352.1| Ras family protein [Tetrahymena thermophila]
gi|89303119|gb|EAS01107.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777772|dbj|BAJ21282.1| Rab-family small GTPase Rab11A [Tetrahymena thermophila]
Length = 230
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/196 (61%), Positives = 164/196 (83%), Gaps = 2/196 (1%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R D D+DY+FK+VLIGDSGVGKSNLLSRFT++EF+ + K+TIGVEFATRSI D+K++KA
Sbjct: 3 RNDQDHDYIFKIVLIGDSGVGKSNLLSRFTKDEFNQDQKTTIGVEFATRSIMADNKLIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERY AITSAYYRGAVGALL+YD+T+H +F N+++WL E+RDH + +IV+MLV
Sbjct: 63 QIWDTAGQERYVAITSAYYRGAVGALLIYDITKHSSFINIQKWLDEIRDHAEPHIVVMLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL- 183
GNK+DL+HLR V EDATAFAE+ N F+ETSAL++ NVE F ++T+IY++++++++
Sbjct: 123 GNKSDLKHLRQVRQEDATAFAEKNNIAFIETSALDASNVELTFQRIITEIYQLLNKRSMV 182
Query: 184 -EIGDDPAALPKGQTI 198
E + + KG+++
Sbjct: 183 PENNESQVSNKKGESL 198
>gi|449451415|ref|XP_004143457.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
gi|449496418|ref|XP_004160129.1| PREDICTED: ras-related protein Rab11A-like [Cucumis sativus]
Length = 226
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 166/217 (76%), Gaps = 7/217 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQ
Sbjct: 10 ANQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIG 129
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL RAV TEDA FAE+E FF+ETSALES NVENAF VLT+I+ +++RK L
Sbjct: 130 NKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVENAFMTVLTEIFSIMNRKNLAA 189
Query: 186 GD-----DPAALPKGQTINV-GTKDDVSAVKKVGCCS 216
G+ + A+L G+ I + G ++ A K+ CCS
Sbjct: 190 GENQGNGNSASLAGGKKIIIPGPAQEIPAKSKM-CCS 225
>gi|342885037|gb|EGU85147.1| hypothetical protein FOXB_04325 [Fusarium oxysporum Fo5176]
Length = 197
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/190 (68%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
Query: 27 SNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGA 86
SNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGA
Sbjct: 8 SNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGA 67
Query: 87 VGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAE 146
VGALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVGNK+DLRHLRAV TE+A +FA
Sbjct: 68 VGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTEEAKSFAS 127
Query: 147 RENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP-AALPKGQTINVGTKDD 205
+ F+ETSAL++ NVE AF +LT+IYR+VS KAL+ GD A + G I++ D
Sbjct: 128 ENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDSAQATIGAGTNISLSKPAD 187
Query: 206 VSAVKKVGCC 215
A K CC
Sbjct: 188 DDAAKGGKCC 197
>gi|253761760|ref|XP_002489255.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
gi|241947115|gb|EES20260.1| hypothetical protein SORBIDRAFT_0012s021070 [Sorghum bicolor]
Length = 217
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ D K VKAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELR H D NIVIMLVGNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 125
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
+DL RAVS+EDA FAE+EN FF+ETSAL++ NVENAF VLT+I+++ S+K +
Sbjct: 126 SDLEEERAVSSEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKK--NMAA 183
Query: 188 DP---AALPKGQTINVGTKDDVSAVKKVGCCSN 217
DP A P V + K CCS+
Sbjct: 184 DPKANGAAPSLAGKKVIVPGPAQEIPKSKCCSS 216
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 163/218 (74%), Gaps = 5/218 (2%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R+ DY+FKVVLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF TR+++ D + +KA
Sbjct: 10 RSPKRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKA 69
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D N+VIML+
Sbjct: 70 QIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLI 129
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL LR V TEDA FA RE+ FFMETSALE+ NVENAF LT+IYR VS+K L
Sbjct: 130 GNKSDLGTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLV 189
Query: 185 IGDDP-----AALPKGQTINVGTKDDVSAVKKVGCCSN 217
++ ++L KG I V ++ K C S+
Sbjct: 190 ANEETDSSGNSSLLKGTKIIVPGQEPAPPAKAACCMSS 227
>gi|226529763|ref|NP_001151068.1| ras-related protein Rab11D [Zea mays]
gi|226958362|ref|NP_001152898.1| uncharacterized protein LOC100272235 [Zea mays]
gi|194696242|gb|ACF82205.1| unknown [Zea mays]
gi|195644068|gb|ACG41502.1| ras-related protein Rab11D [Zea mays]
gi|413956768|gb|AFW89417.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 164/217 (75%), Gaps = 9/217 (4%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A D DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ D + VKAQ
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F+++ RWL ELR H D NIVIMLVG
Sbjct: 64 IWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVG 123
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-- 183
NK+DL RAVSTEDA FAE+EN FF+ETSAL++ NVE+AF VLT+I+++ S+K +
Sbjct: 124 NKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKKNMVS 183
Query: 184 ---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G P A+P + + G ++ K CCS+
Sbjct: 184 EPKSNGAAP-AMPGTKVLVPGPAQEIPKSK---CCSS 216
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 161/208 (77%), Gaps = 3/208 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF RNEFSL+SK+TIGVEF T+++ D+K +KAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTIKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHADQNIVIMLIGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LRAV EDA A+REN FFMETSALES NVE F +LT+IYR+ ++K+L DD
Sbjct: 133 GSLRAVPMEDAEEVAQRENLFFMETSALESTNVETCFLTILTEIYRIHAKKSLTASDDDN 192
Query: 189 -PAALPKGQTINVGTKDDVSAVKKVGCC 215
+ L KG I V ++ + KK GCC
Sbjct: 193 WGSGLLKGSRIIVPNQEIDNGGKKGGCC 220
>gi|145342495|ref|XP_001416217.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576442|gb|ABO94510.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 202
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 128/184 (69%), Positives = 150/184 (81%), Gaps = 2/184 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD YDYLFK+VL+GDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR+I +KI+KAQI
Sbjct: 6 DDSYDYLFKIVLVGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIELQNKIIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYDVT T++N+E+WL ELRDH D++IVIMLVGN
Sbjct: 66 WDTAGQERYRAITSAYYRGAVGALLVYDVTSGDTYDNIEKWLSELRDHADASIVIMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL HLR A FAE+E F+ETSAL + NVE+AF + L ++Y VVS+ L++
Sbjct: 126 KCDLEHLRVTEAATAQQFAEKEGLMFIETSALNATNVEHAFIDSLGRVYDVVSK--LKMA 183
Query: 187 DDPA 190
P+
Sbjct: 184 CTPS 187
>gi|357146059|ref|XP_003573862.1| PREDICTED: ras-related protein Rab11D-like [Brachypodium
distachyon]
Length = 216
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ D K VKAQIW
Sbjct: 5 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLLIDHKSVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELR H D NIVIMLVGNK
Sbjct: 65 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 124
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
+DL RAVSTEDA FAE+EN FF+ETSAL++ NVENAF VL++I+++ S+K I
Sbjct: 125 SDLEDERAVSTEDAKEFAEKENVFFLETSALQATNVENAFQTVLSEIFKIHSKK--NIAA 182
Query: 188 DPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
+P A P V + K CCS+
Sbjct: 183 EPKANGSAPSLAGKKVLVPGPAQEIPKSKCCSS 215
>gi|50292391|ref|XP_448628.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527940|emb|CAG61591.1| unnamed protein product [Candida glabrata]
Length = 221
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 158/195 (81%), Gaps = 3/195 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT NEF+LESKSTIGVEFATR+I+ +DK +KAQIWD
Sbjct: 10 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIKVEDKKIKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WL EL+++ D N+ I L+GNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALIVYDISKSGTYENCNHWLTELKENADDNVAIGLIGNKS 129
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A FA FF ETSAL S NV+ AF E++ QIY++V++ +++G++
Sbjct: 130 DLEHLRAVPTEEARGFASENQLFFTETSALNSENVDLAFRELIEQIYKMVNKHQVDLGEN 189
Query: 189 ---PAALPKGQTINV 200
+ PKG TI++
Sbjct: 190 AKGSSGAPKGPTISL 204
>gi|226532614|ref|NP_001149604.1| LOC100283230 [Zea mays]
gi|195628412|gb|ACG36036.1| ras-related protein Rab11D [Zea mays]
gi|224032313|gb|ACN35232.1| unknown [Zea mays]
gi|413934318|gb|AFW68869.1| Ras protein Rab11D [Zea mays]
Length = 217
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ + K VKAQIW
Sbjct: 6 DKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIEHKSVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELR H D NIVIMLVGNK
Sbjct: 66 DTAGQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNK 125
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
+DL RAVSTEDA FAE+EN FF+ETSAL++ NVENAF VLT+I+++ S+K +
Sbjct: 126 SDLEDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLTEIFKIHSKK--NMAA 183
Query: 188 DP---AALPKGQTINVGTKDDVSAVKKVGCCSN 217
DP A P V + K CCS+
Sbjct: 184 DPRANGAAPSLAGKKVIVPGPAQEIPKSKCCSS 216
>gi|256071416|ref|XP_002572036.1| rab11 [Schistosoma mansoni]
gi|350645030|emb|CCD60260.1| rab11, putative [Schistosoma mansoni]
Length = 218
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 154/210 (73%), Gaps = 1/210 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFAT+S+ D + +KAQI
Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVEIDGRTIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGALLVYD+T+ TF N+E WL ELR++ + ++V+MLVGN
Sbjct: 70 WDTAGQERYRAITAAYYRGAVGALLVYDITKRETFNNLEHWLLELRNNVELDMVVMLVGN 129
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DLRHLR V TEDA +AER FFMETSALES VENAF +L I+ V
Sbjct: 130 KCDLRHLRTVQTEDAKLWAERHGLFFMETSALESTGVENAFYYILKTIFEAVRSHPPVSN 189
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
D P V D S + CCS
Sbjct: 190 VDMKMSPYNNQPIVSPNTDSSKSGR-RCCS 218
>gi|393238684|gb|EJD46220.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 163/208 (78%), Gaps = 2/208 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
+DYLFK V++GDSGVGK+N+LSRFTRNEFS++SKSTIGV+FAT+ I D+K+VKAQ+WDT
Sbjct: 7 HDYLFKTVIVGDSGVGKTNMLSRFTRNEFSIDSKSTIGVDFATKYINVDNKVVKAQLWDT 66
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQ+RYRAIT+AYYRGAVGALLVYD+TR T++N+ RWLKELRD D+N VIMLVGNK+D
Sbjct: 67 AGQDRYRAITAAYYRGAVGALLVYDITRRGTYDNLLRWLKELRDFADTNAVIMLVGNKSD 126
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L+H+RAVSTE+A AF+ F+ETSAL+S NV+ AF V+ I+++VS + LE ++
Sbjct: 127 LKHIRAVSTEEAAAFSAEHGLSFLETSALDSSNVDEAFNTVVNDIFKIVSAQQLERSENE 186
Query: 190 AALP-KGQTINVGTKDDVSAVKKVGCCS 216
+ P G I + + K GCCS
Sbjct: 187 VSAPGAGAPIKIDNSTETQTTKG-GCCS 213
>gi|226503741|ref|NP_001151560.1| ras-related protein Rab11D [Zea mays]
gi|194708702|gb|ACF88435.1| unknown [Zea mays]
gi|195647718|gb|ACG43327.1| ras-related protein Rab11D [Zea mays]
gi|414865255|tpg|DAA43812.1| TPA: Ras protein Rab11D [Zea mays]
Length = 217
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 164/217 (75%), Gaps = 9/217 (4%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A D DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ D + VKAQ
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F+++ RWL ELR H D NIVIMLVG
Sbjct: 64 IWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVG 123
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-- 183
NK+DL RAVSTEDA FAE+EN FF+ETSAL++ NVE++F VLT+I+++ S+K +
Sbjct: 124 NKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESSFQTVLTEIFKIHSKKNMVS 183
Query: 184 ---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G P A+P + + G ++ K CCS+
Sbjct: 184 EPKSNGAAP-AMPGTKVLVPGPAQEIPKSK---CCSS 216
>gi|56758196|gb|AAW27238.1| SJCHGC02859 protein [Schistosoma japonicum]
Length = 218
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 161/211 (76%), Gaps = 3/211 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++YDYLFK+VLIGDSGVGKSNLLSRFTR+ F+LESKSTIGVEFATR++ D K++KAQI
Sbjct: 10 EEEYDYLFKIVLIGDSGVGKSNLLSRFTRDTFNLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYDV +F N+E WLKEL DH + NIV+MLVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALLVYDVCVLQSFRNLEIWLKELNDHAEKNIVVMLVGN 129
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV-SRKALEI 185
K DLRHLR+V TEDA FA+++ F+ETSAL+S NVE AF ++L IY +V S +
Sbjct: 130 KCDLRHLRSVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQNIYSIVSSHPPVNN 189
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
D +L Q I D+ S ++ CC+
Sbjct: 190 IDMKMSLHNNQPIVSPNADNASGGRR--CCN 218
>gi|72384499|gb|AAZ67615.1| 80A08_30 [Brassica rapa subsp. pekinensis]
Length = 223
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 162/210 (77%), Gaps = 4/210 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+VLIGDSGVGKS +LSR+ RNEFSL+SK+TIGVEF TR++ D K VKAQIWDTA
Sbjct: 14 DYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVMDHKSVKAQIWDTA 73
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYDVTR TF+++ RWL+ELR H D NIVI+LVGNK+DL
Sbjct: 74 GQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRGHADKNIVIILVGNKSDL 133
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD--- 187
RA+STEDA FAE E FF+ETSAL ++NVE AF+ VLT+I+ +V++K L G+
Sbjct: 134 EDQRAISTEDAKEFAETEGLFFLETSALNAVNVETAFSTVLTEIFNIVNKKNLVAGEGNG 193
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
DP +L G+ I++ K G C N
Sbjct: 194 DPGSL-AGKKIDIVPGPAQVVPTKSGMCCN 222
>gi|82793187|ref|XP_727942.1| small GTPase Rab11 [Plasmodium yoelii yoelii 17XNL]
gi|23484033|gb|EAA19507.1| small GTPase rab11-related [Plasmodium yoelii yoelii]
Length = 172
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 126/166 (75%), Positives = 150/166 (90%), Gaps = 1/166 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQ 65
+D YDYLFK+VLIGDSGVGKSNLLSRFTR+EF+LESKSTIGVEFAT+SI+ +DKI+KAQ
Sbjct: 5 EDYYDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TFEN+E+WLKELRD+ DSNIVI+LVG
Sbjct: 65 IWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFENIEKWLKELRDNADSNIVILLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVL 171
NK+DL+HLR ++ DAT FA++E F+ETSALE+ NVE AF ++L
Sbjct: 125 NKSDLKHLRVINDNDATQFAKKEKLAFIETSALEATNVELAFHQLL 170
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/212 (60%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF TR+++ D + +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D N+VIML+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKNLVIMLIGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
LR V TEDA FA RE+ FFMETSALE+ NVENAF LT+IYR VS+K L ++
Sbjct: 135 GTLRVVPTEDAKEFAARESLFFMETSALEATNVENAFRTALTEIYRNVSKKNLVANEETD 194
Query: 190 ----AALPKGQTINVGTKDDVSAVKKVGCCSN 217
++L KG I V ++ K C S+
Sbjct: 195 SSGNSSLLKGTKIIVPGQEPAPPAKAACCMSS 226
>gi|226469320|emb|CAX70139.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 159/211 (75%), Gaps = 3/211 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR++ D K++KAQI
Sbjct: 10 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELRDH + NIV+MLVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV-SRKALEI 185
K DLRHLR V TEDA FA+++ F+ETSAL+S NVE AF ++L IY +V S +
Sbjct: 130 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYNIVSSHPPVNN 189
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
D +L Q I D+ S ++ CC+
Sbjct: 190 VDMKMSLHNNQPIVSPNADNASGGRR--CCN 218
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/225 (64%), Positives = 164/225 (72%), Gaps = 15/225 (6%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+A DDYDYLFKVVL+GDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+ D K +KA
Sbjct: 11 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKA 70
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS-NIVIML 123
QIWDTAGQERYRAITSAYYRGA GALLVYDVTR TFE+ RWL+ELRDH D +ML
Sbjct: 71 QIWDTAGQERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADGRGAAVML 130
Query: 124 VGNKADL---------RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
VGNK DL H RAV DA A AERE F+ETSAL++ NV+ AF +LT+I
Sbjct: 131 VGNKTDLARSGSRSRHHHPRAVPRGDAAALAEREGLSFVETSALDATNVDAAFETLLTEI 190
Query: 175 YRVVSRKAL---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
YR VSRKAL GDD AA+ +GQ I V D + CC+
Sbjct: 191 YRAVSRKALAASSAGDDAAAVGEGQAIQVSAGDSAGLTTR--CCA 233
>gi|115481766|ref|NP_001064476.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|78708412|gb|ABB47387.1| Ras-related protein Rab11D, putative, expressed [Oryza sativa
Japonica Group]
gi|113639085|dbj|BAF26390.1| Os10g0377400 [Oryza sativa Japonica Group]
gi|215767227|dbj|BAG99455.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184417|gb|EEC66844.1| hypothetical protein OsI_33317 [Oryza sativa Indica Group]
gi|222612729|gb|EEE50861.1| hypothetical protein OsJ_31310 [Oryza sativa Japonica Group]
Length = 216
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 159/210 (75%), Gaps = 5/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFS++SK+TIGVEF TR++ D K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHKSVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELR H D NIVIMLVGNK+DL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 127
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
RAVSTEDA FAE+EN FF+ETSAL++ NVENAF VL++I+++ S+K + DP
Sbjct: 128 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKK--NMAADPK 185
Query: 190 --AALPKGQTINVGTKDDVSAVKKVGCCSN 217
A P V + K CCS+
Sbjct: 186 ANGAAPSLAGKKVVVPGPAQEIPKSKCCSS 215
>gi|3024500|sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
Length = 226
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 166/215 (77%), Gaps = 6/215 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ D K VKAQ
Sbjct: 10 ANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIG 129
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL + R V TEDA FAE+E FF+ETSALE+ NVE+AFT VLT+IY +V++K+L
Sbjct: 130 NKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAA 189
Query: 186 ----GDDPAALPKGQTINV-GTKDDVSAVKKVGCC 215
G+ +A GQ I + G ++ A K+ CC
Sbjct: 190 DESQGNGNSASLSGQKIIIPGPAQEIPA-KRNMCC 223
>gi|294887922|ref|XP_002772283.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239876358|gb|EER04099.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 234
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 146/174 (83%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DYDYLFKVVLIGDSGVGKSN+LSRFTR EF+LES+STIGVEFAT+S+R +K+VKAQIW
Sbjct: 13 EDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGEKVVKAQIW 72
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALLVYD+++ +F+N RWLKELR+H DS+IV+MLVGNK
Sbjct: 73 DTAGQERYRAITSAYYRGAVGALLVYDISKRSSFDNAARWLKELREHADSDIVVMLVGNK 132
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
DL HLRA+ E+A F + F+ETSALE+ NVE AF +L IY+V S K
Sbjct: 133 CDLSHLRAIEEEEAEKFCSDNDLLFIETSALEATNVEEAFQNILEDIYKVNSSK 186
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 153/185 (82%), Gaps = 2/185 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF +N+FS++SK+TIGVEF T+++ D+K VKAQIWDTA
Sbjct: 14 DYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQIWDTA 73
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+N+ +WL+ELR H D NIV+ML+GNK DL
Sbjct: 74 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKNIVVMLIGNKCDL 133
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
LRAV TEDA FA+REN FFMETSALES NVE AF +LT+IYR++S+K L DD
Sbjct: 134 GTLRAVPTEDAEEFAQRENLFFMETSALESTNVETAFLTILTEIYRLISKKTLTANDD-- 191
Query: 191 ALPKG 195
A P G
Sbjct: 192 ADPSG 196
>gi|327357374|gb|EGE86231.1| Rab1a [Ajellomyces dermatitidis ATCC 18188]
Length = 209
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 155/203 (76%), Gaps = 7/203 (3%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQIWDTAGQERY
Sbjct: 11 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERY 70
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD T+ TF N ERWLKELR+H D NIVIMLVGNK D +H+RA
Sbjct: 71 RAITSAYYRGAVGALLVYDTTKEQTFANCERWLKELREHADKNIVIMLVGNKIDQKHVRA 130
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE---IGDDPAAL 192
+ T+ FAE F+ETSAL++ NVE AF +LT+IYR+VS KALE G +P L
Sbjct: 131 IKTDQGAEFAETRKLSFIETSALDATNVELAFQNILTEIYRIVSSKALENGTSGQNP--L 188
Query: 193 PKGQTINVGTKDDVSAVKKVGCC 215
+ + + D A +K CC
Sbjct: 189 GDRKVVEITKSQDADAKQK--CC 209
>gi|226469322|emb|CAX70140.1| Rab-protein 11 [Schistosoma japonicum]
Length = 218
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 159/211 (75%), Gaps = 3/211 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR++ D K++KAQI
Sbjct: 10 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELRDH + NIV+MLVGN
Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 129
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV-SRKALEI 185
K DLRHLR V TEDA FA+++ F+ETSAL+S NVE AF ++L IY +V S +
Sbjct: 130 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVSSHPPVNN 189
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
D +L Q I D+ S ++ CC+
Sbjct: 190 IDMKMSLHNNQPIVSPNADNASGGRR--CCN 218
>gi|351726222|ref|NP_001237375.1| uncharacterized protein LOC100527786 [Glycine max]
gi|255633206|gb|ACU16959.1| unknown [Glycine max]
Length = 223
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 166/220 (75%), Gaps = 8/220 (3%)
Query: 2 GAYR-ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
G+Y A+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K
Sbjct: 5 GSYGDANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHK 64
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQIWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR+H D NIV
Sbjct: 65 SVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIV 124
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
I+L+GNK+DL + R V TEDA FAE+E FF+ETSALE+ NVE AF VLT+I+ +V++
Sbjct: 125 IILIGNKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIVNK 184
Query: 181 KALEIGD-----DPAALPKGQTINVGTKDDVSAVKKVGCC 215
K L GD + A+L Q I GT ++ K+ CC
Sbjct: 185 KNLAAGDNQGNGNAASLSGKQIIVPGTAQEIP--KRSMCC 222
>gi|242036665|ref|XP_002465727.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
gi|241919581|gb|EER92725.1| hypothetical protein SORBIDRAFT_01g044550 [Sorghum bicolor]
Length = 217
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A D DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ D + VKAQ
Sbjct: 4 AGDKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHRSVKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGA+GALLVYD+TR +F+++ RWL ELR H D NIVIMLVG
Sbjct: 64 IWDTAGQERYRAVTSAYYRGALGALLVYDITRRQSFDHIPRWLDELRAHADKNIVIMLVG 123
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL RAVSTEDA FAE+EN FF+ETSAL++ NVE+AF VLT+I+++ S+K +
Sbjct: 124 NKSDLEEQRAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLTEIFKIHSKK--NM 181
Query: 186 GDDPAA---LPKGQTINVGTKDDVSAVKKVGCCSN 217
+P + P V + K CCS+
Sbjct: 182 VSEPKSNGVAPAMAGTKVLVPGPAQEIPKSKCCSS 216
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/208 (62%), Positives = 160/208 (76%), Gaps = 5/208 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+VLIGDS VGKS L+RF RNEF+ +SK+TIGVEF T+++ D+K VKAQIWDTA
Sbjct: 12 DYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D +I+IML+GNK DL
Sbjct: 72 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHADKSIIIMLIGNKCDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
LRAV TEDA FA+REN FFMETSALE+ NVE AF VLT+IYR++S+K L D
Sbjct: 132 GSLRAVPTEDAEEFAQRENLFFMETSALEATNVETAFWTVLTEIYRIISKKTLAGNDKSD 191
Query: 191 ALP---KGQTINVGTKDDVSAVKKVGCC 215
P KG I V ++ S +K GCC
Sbjct: 192 GNPGVFKGTRILVPSQAQNS--EKKGCC 217
>gi|308476613|ref|XP_003100522.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
gi|308264778|gb|EFP08731.1| CRE-RAB-11.2 protein [Caenorhabditis remanei]
Length = 345
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 147/176 (83%), Gaps = 1/176 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLFKVVLIGDSGVGKSNLLSRFTRN+F LE+KSTIGVEFATRS+ + K +KA I
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNQFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-SNIVIMLVG 125
WDTAGQERYRAITSAYYRG +GAL+VYD+ +H TFEN+ERWLKELR+H D +I IMLVG
Sbjct: 66 WDTAGQERYRAITSAYYRGTLGALVVYDIAKHQTFENIERWLKELRNHADQQDISIMLVG 125
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
NK DLRHLRAV T++A FAER F+ETSAL+S NVE A +LT IY+ VS K
Sbjct: 126 NKTDLRHLRAVPTDEAAVFAERNQMSFIETSALDSTNVEEALRNLLTAIYKSVSTK 181
>gi|426379449|ref|XP_004056410.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Gorilla gorilla
gorilla]
Length = 198
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 157/211 (74%), Gaps = 18/211 (8%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFA E AF +LT+IYR+VS+K +
Sbjct: 125 KSDLRHLRAVPTDEARAFA------------------EAAFQTILTEIYRIVSQKQMSDR 166
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ P + + KV CC N
Sbjct: 167 RENDMSPSNNVVPIHVPPTTENKPKVQCCQN 197
>gi|268561566|ref|XP_002638358.1| Hypothetical protein CBG18559 [Caenorhabditis briggsae]
Length = 214
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/215 (61%), Positives = 162/215 (75%), Gaps = 12/215 (5%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLFKVVL+GDSGVGKSNLLSRFTRN F LE+KSTIGVEFATRS+ + K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-SNIVIMLVG 125
WDTAGQERYRAIT AYYRGA+G L+VYD+ +H TF+N+++WLKELR+H D SNI IMLVG
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DLRHLRAV T++A +A+R + F+ETSAL+S NVE A +LT IY+ VS K
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFIETSALDSTNVEEALRNLLTDIYKTVSTK---Y 182
Query: 186 GDDPAALPKGQ----TINVGTKDDVSAVKKVGCCS 216
G D +P G NV + +DV K CC+
Sbjct: 183 GVDSKPVPYGGLGTIMTNVPSTEDV----KKKCCN 213
>gi|58267306|ref|XP_570809.1| ras-related protein ypt3 (rab) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57227043|gb|AAW43502.1| ras-related protein ypt3 (rab), putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 205
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 131/189 (69%), Positives = 148/189 (78%), Gaps = 1/189 (0%)
Query: 28 NLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAV 87
NLLSRFTRNEF+LESKSTIGVEFATRSI D K VKAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 17 NLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQERYRAITSAYYRGAV 76
Query: 88 GALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAER 147
GALLVYD+ +H T+ENV RWLKELRDH D+NIVIMLVGNK+DL+HLRAVST++A FA
Sbjct: 77 GALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLKHLRAVSTDEAKQFATE 136
Query: 148 ENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPKGQTINVG-TKDDV 206
F+ETSAL++ NVE+AF +LT IYR+VS K+LE D G+TI V T DD
Sbjct: 137 NGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGDVIKPSGGETILVAPTADDG 196
Query: 207 SAVKKVGCC 215
A CC
Sbjct: 197 GAKSGSKCC 205
>gi|255717675|ref|XP_002555118.1| KLTH0G01760p [Lachancea thermotolerans]
gi|238936502|emb|CAR24681.1| KLTH0G01760p [Lachancea thermotolerans CBS 6340]
Length = 218
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 157/210 (74%), Gaps = 3/210 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I + K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNMESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---EI 185
DL HLRAV T++A FA+ F ETSAL S NV+ AF E++T IY++VS+ + E
Sbjct: 129 DLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLNEY 188
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G++ PKG TI++ K CC
Sbjct: 189 GNNAGQAPKGPTISLTPAPAKKNKKSDNCC 218
>gi|225468180|ref|XP_002273530.1| PREDICTED: ras-related protein Rab11A [Vitis vinifera]
gi|147811153|emb|CAN70163.1| hypothetical protein VITISV_039255 [Vitis vinifera]
Length = 226
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 159/210 (75%), Gaps = 6/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVI+L+GNK DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNKTDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
RAV TEDA FAE+E FF+ETSALE+ NVENAF VLT+I+ +V++K L G+D
Sbjct: 135 EEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNLVAGEDQA 194
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCC 215
PA+L + G ++ A K CC
Sbjct: 195 NGNPASLTGKRITIPGPAQEIPA-KSNMCC 223
>gi|281210631|gb|EFA84797.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 160/209 (76%), Gaps = 11/209 (5%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DYDYL+K+VLIGDSGVGKSNLLSRFTRNEF+LE+KSTIGVEFATR+I + K +KAQIW
Sbjct: 9 EDYDYLYKIVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTIVTEGKTIKAQIW 68
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN--IVIMLVG 125
DTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERWL ELR++ D N I IMLVG
Sbjct: 69 DTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNFDIEIMLVG 128
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DLRHLR VST++A FAE+ F+ETSAL+S NV+ AF +LTQI +SR
Sbjct: 129 NKSDLRHLREVSTDEAKEFAEKHKLLFIETSALDSSNVDVAFQTILTQICHSMSRPT--- 185
Query: 186 GDDPAALPKGQTIN---VGTKDDVSAVKK 211
P P G N +GT D+S+ K
Sbjct: 186 ---PIGAPSGHDDNSPSIGTPVDISSDTK 211
>gi|224135525|ref|XP_002322095.1| predicted protein [Populus trichocarpa]
gi|222869091|gb|EEF06222.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/217 (58%), Positives = 167/217 (76%), Gaps = 8/217 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+IR DK++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TF+NV++WL ELRD S++V++LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLHELRDFGSSDMVVVLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+D+ HLR V +D AE E +FMETSALE++NVE AF +++T+I+ + S+K+LE
Sbjct: 126 KSDISHLREVDEDDGKNLAETEALYFMETSALENLNVEEAFMQMITRIHEIASQKSLEAK 185
Query: 187 DDPA------ALPKGQTINVGTKDDVSAVKKVG-CCS 216
+ ALP G+ + + D+VSA K+ CCS
Sbjct: 186 KNETTISTIKALPVGKEV-INIDDEVSATKQASYCCS 221
>gi|190347699|gb|EDK40024.2| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 159/208 (76%), Gaps = 1/208 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D + VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADTNIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A +FA + F E SAL S NV+ +F ++L IY ++S+ L+ D
Sbjct: 131 DLDHLRAVPTEEAKSFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQ 190
Query: 189 PAALPKGQTINV-GTKDDVSAVKKVGCC 215
A P G TI++ + CC
Sbjct: 191 GAQKPSGPTISLTPAPQEKKGKNNSNCC 218
>gi|294895479|ref|XP_002775190.1| Rab11, putative [Perkinsus marinus ATCC 50983]
gi|239881188|gb|EER07006.1| Rab11, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/171 (71%), Positives = 145/171 (84%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A++DYDYLFKVVLIGDSGVGKSN+LSRFTR EF+LES+STIGVEFAT+S+R K+VKAQ
Sbjct: 8 AEEDYDYLFKVVLIGDSGVGKSNILSRFTRGEFNLESRSTIGVEFATKSVRIGSKVVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+++ +FEN RWLKELR+H DS+IV+MLVG
Sbjct: 68 IWDTAGQERYRAITSAYYRGAVGALLVYDISKRSSFENAARWLKELREHADSDIVVMLVG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
NK DL HLRAV ++A F + F+ETSALE+ NVE AF E+L IY+
Sbjct: 128 NKCDLSHLRAVEEDEAKKFCTDNDLLFIETSALEATNVEEAFQEILEDIYK 178
>gi|210075737|ref|XP_502830.2| YALI0D14630p [Yarrowia lipolytica]
gi|199425807|emb|CAG81018.2| YALI0D14630p [Yarrowia lipolytica CLIB122]
Length = 212
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 161/213 (75%), Gaps = 8/213 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D+YD+LFKVV+IGDSGVGK+N+L RFTR+EF+L+SKSTIGVEFATR++ D+KI+KAQIW
Sbjct: 3 DEYDFLFKVVMIGDSGVGKTNILGRFTRDEFNLDSKSTIGVEFATRTVNIDNKIIKAQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGALL+YDVT +++N+ RWL+EL+DH DSNIV+MLVGNK
Sbjct: 63 DTAGQERYRAITSAYYRGAVGALLLYDVTSTQSYKNISRWLQELQDHADSNIVLMLVGNK 122
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS-----RKA 182
DL+HLRAV TE+A FA + F+ETSAL+ +V AF +LT+IY VS
Sbjct: 123 CDLKHLRAVPTEEAKQFASQNKLLFIETSALDGTDVALAFRNILTEIYHRVSAAENVHAN 182
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
LE P +G TI++ + S K CC
Sbjct: 183 LEDSRKPQ---QGTTISLTPQPGDSDKKSSSCC 212
>gi|20356|emb|CAA41966.1| GTP-binding protein [Oryza sativa]
gi|228209|prf||1718315A GTP-binding protein
Length = 226
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/210 (62%), Positives = 159/210 (75%), Gaps = 6/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+ F RNEF+L+SK+TIGVEF TR++ D + VKAQ DTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQLLAGFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQTRDTA 75
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL+ELR H D NIVIML+GNK+DL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDL 135
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
LR V TEDA FAEREN FFMETSALES N+ENAF VLT+IYR+VS+K L ++
Sbjct: 136 GTLRVVPTEDAKEFAERENLFFMETSALESTNLENAFMTVLTEIYRIVSKKNLVANEEVD 195
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCC 215
++L KG I V ++ K CC
Sbjct: 196 SSGNSSLLKGTKIVVPGQEPAPPT-KASCC 224
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 164/209 (78%), Gaps = 8/209 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF RNEFS++SK+TIGVEF T+++ D+K VKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER A+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELR H D NIVIML+GNK DL
Sbjct: 73 GQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
LRAV TEDA FA+REN FFMETSALE+ NVE AF +LT+IYR++S+K+L DD A
Sbjct: 131 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDA 190
Query: 191 ----ALPKGQTINVGTKDDVSAVKKVGCC 215
+L KG I + ++ + K+ GCC
Sbjct: 191 DGNSSLLKGTRIIIPSEQESG--KRGGCC 217
>gi|344233518|gb|EGV65390.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 219
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 161/209 (77%), Gaps = 2/209 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+L+S+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLDSRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA + F E SAL S NV+ +F ++L IY ++S+ LE D
Sbjct: 131 DLDHLRAVPTDEAKNFANENSLLFTEASALNSDNVDLSFHQLLKNIYEMISKHQLETDDQ 190
Query: 189 PAALP-KGQTINV-GTKDDVSAVKKVGCC 215
P+A P G TI++ + + CC
Sbjct: 191 PSAKPSSGATISLTPVPQEKKSKNNANCC 219
>gi|297807067|ref|XP_002871417.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
gi|297317254|gb|EFH47676.1| hypothetical protein ARALYDRAFT_325580 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/211 (60%), Positives = 163/211 (77%), Gaps = 5/211 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+VLIGDSGVGKS +LSR+ RNEFSL+SK+TIGVEF TR++ D K VKAQIWDTA
Sbjct: 15 DYVFKLVLIGDSGVGKSQILSRYARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYDVTR TF+++ RWL+ELR++ D NIVI+LVGNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDVTRRQTFDHIPRWLEELRNNADKNIVIILVGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD--- 187
RA+S EDA FAE+E FF+ETSAL ++NVE+AF+ VLT+I+ +V++K+L G+
Sbjct: 135 EDQRAISMEDAKDFAEKEGLFFLETSALNAVNVESAFSTVLTEIFNIVNKKSLVAGEGEG 194
Query: 188 --DPAALPKGQTINVGTKDDVSAVKKVGCCS 216
DP +L + V V K CC+
Sbjct: 195 NGDPGSLAGKKIDIVPGPGQVIPTKNKLCCN 225
>gi|255070867|ref|XP_002507515.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
gi|226522790|gb|ACO68773.1| small GTPase from the rab subfamily [Micromonas sp. RCC299]
Length = 217
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/177 (72%), Positives = 147/177 (83%), Gaps = 2/177 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR-C-DDKIVKAQ 65
DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEF ESKSTIGVEFATR I C + K VKAQ
Sbjct: 6 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCSESKSTIGVEFATRCIEVCLEGKTVKAQ 65
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGAVGALLVYD+T+ +++NV++WLKELRDH DSNIVI LVG
Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDITKSESYDNVQKWLKELRDHADSNIVITLVG 125
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
NK DL+HLR+V E A F+ E F+ETSA ES NV+ AF + LT +Y ++S+K+
Sbjct: 126 NKTDLKHLRSVQAESAAEFSSIEGLSFVETSACESTNVDVAFKKNLTDVYHIISKKS 182
>gi|326528455|dbj|BAJ93377.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ D K VKAQIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELR H D NI+IMLVGNK+DL
Sbjct: 68 GQERYRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIIIMLVGNKSDL 127
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
RAVSTEDA FAE+EN FF+ETSAL++ NVE+AF VL++I+++ S+K I DP
Sbjct: 128 EDERAVSTEDAKEFAEKENLFFLETSALQATNVESAFQTVLSEIFKIHSKK--NIVTDPK 185
Query: 190 --AALPKGQTINVGTKDDVSAVKKVGCCSN 217
A P V + K CC +
Sbjct: 186 ANGAAPPLAGKKVLVPGPAQEIPKSKCCGS 215
>gi|1381676|gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
Length = 222
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 163/217 (75%), Gaps = 5/217 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ D K VKAQ
Sbjct: 6 ANQRIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 65
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+L G
Sbjct: 66 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTG 125
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL + R V TEDA FAE+E FF+ETSALE+ NVE AF VLT+IY +V++K L
Sbjct: 126 NKCDLENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTA 185
Query: 186 ----GDDPAALPKGQTINV-GTKDDVSAVKKVGCCSN 217
G+ +A GQ I V G ++ A + + C S+
Sbjct: 186 DENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 222
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 162/208 (77%), Gaps = 5/208 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+VLIGDS VGKS LL+RF RNEF+++SK+TIGVEF T+++ +K VKAQIWDTA
Sbjct: 12 DYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D +I+IML+GNK DL
Sbjct: 72 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKSIIIMLIGNKCDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
LRAV EDA FA+REN FFMETSALE+ NVE AF +LT+IYR++S++ L D+
Sbjct: 132 GSLRAVPAEDAKEFAQRENLFFMETSALEATNVETAFLTMLTEIYRIISKRTLAGNDESN 191
Query: 190 --AALPKGQTINVGTKDDVSAVKKVGCC 215
+ KG I V +++ S +K GCC
Sbjct: 192 ENSGAFKGTRILVPSQEQNS--EKKGCC 217
>gi|56758728|gb|AAW27504.1| SJCHGC09130 protein [Schistosoma japonicum]
Length = 228
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/173 (71%), Positives = 145/173 (83%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D+YDYLFKVVLIGDSGVGKSNLLSRFTR+ F LESKSTIGVEFATR++ D K++KAQI
Sbjct: 21 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRDTFDLESKSTIGVEFATRNVNIDGKVIKAQI 80
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGAL+VYDV + +F N+ WL ELRDH + NIV+MLVGN
Sbjct: 81 WDTAGQERYRAITSAYYRGAVGALVVYDVCKLQSFHNLTSWLNELRDHAEKNIVMMLVGN 140
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
K DLRHLR V TEDA FA+++ F+ETSAL+S NVE AF ++L IY +VS
Sbjct: 141 KCDLRHLRNVGTEDARFFAQQQGLSFIETSALDSTNVEEAFCQILQDIYSIVS 193
>gi|224083598|ref|XP_002307071.1| predicted protein [Populus trichocarpa]
gi|118482292|gb|ABK93073.1| unknown [Populus trichocarpa]
gi|222856520|gb|EEE94067.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 162/215 (75%), Gaps = 7/215 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ D K VKAQ
Sbjct: 10 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIDHKSVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRSHADKNIVIILIG 129
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL RAV TED FA++E FF+ETSAL++ NVE+AF +LT+I+ +V++K L
Sbjct: 130 NKSDLEDQRAVPTEDVNEFAQKEGLFFLETSALQATNVESAFMTLLTEIFNIVNKKNLIA 189
Query: 186 GD-----DPAALPKGQTINVGTKDDVSAVKKVGCC 215
G+ +PA+L + I G ++ + K CC
Sbjct: 190 GENQSNGNPASLSGKKIIIPGPAQEIPSKSK--CC 222
>gi|356512683|ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
Length = 229
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/212 (61%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ D K VKAQIWDTA
Sbjct: 18 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 77
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+L GNK DL
Sbjct: 78 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKCDL 137
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI----G 186
+ R V TEDA FAE+E FF+ETSALE+ NVE AF VLT+IY +V++K L G
Sbjct: 138 ENQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADENQG 197
Query: 187 DDPAALPKGQTINV-GTKDDVSAVKKVGCCSN 217
+ +A GQ I V G ++ A + + C S+
Sbjct: 198 NGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 229
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 153/187 (81%), Gaps = 2/187 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF+RN+F+++SK+TIGVEF T+++ D K VKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ +WL+ELR H D+NIVIML+GNK DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTNIVIMLIGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
L+AV TEDA FA+REN FFMETSALES NVE AF +LT+IYR++ +K L DD
Sbjct: 133 ATLKAVPTEDAQEFAQRENLFFMETSALESTNVETAFLTILTEIYRLIGKKTLTANDDTD 192
Query: 191 ALPKGQT 197
P G +
Sbjct: 193 --PSGSS 197
>gi|168040993|ref|XP_001772977.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162675710|gb|EDQ62202.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/219 (58%), Positives = 164/219 (74%), Gaps = 11/219 (5%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
+Y+ + DYLFKVVLIGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ D K +
Sbjct: 2 SYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEL 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RW EL+ H+D+N+V+M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRGTFENVSRWFDELKVHSDANVVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL H+R V+ E+ATA AE+ +FMETSALE++NV AF VL +I+++VS+KA
Sbjct: 122 LVGNKSDLAHIREVTAEEATALAEKNTMYFMETSALEAVNVVEAFQTVLKEIHKIVSKKA 181
Query: 183 LEIGDDPAALPKGQTI-----NVGTKDDVSAVKKVGCCS 216
L DP KG T+ + DD + + CCS
Sbjct: 182 LTA--DP---NKGNTVVASGQRLAGSDDTTP-RTTACCS 214
>gi|3024505|sp|Q40522.1|RB11D_TOBAC RecName: Full=Ras-related protein Rab11D
gi|623580|gb|AAA74114.1| putative [Nicotiana tabacum]
Length = 222
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 162/217 (74%), Gaps = 7/217 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQ
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL RAV TEDA FA++E FF+ETSA+E+ N+E+AF VLT+I+ +V++K L
Sbjct: 128 NKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAA 187
Query: 186 GD-----DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D +PA+L G+ I V V KK CCS+
Sbjct: 188 DDNQSNGNPASL-TGKKILVPGPGQVIPEKK-ACCSS 222
>gi|367001354|ref|XP_003685412.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
gi|357523710|emb|CCE62978.1| hypothetical protein TPHA_0D03430 [Tetrapisispora phaffii CBS 4417]
Length = 223
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 119/192 (61%), Positives = 152/192 (79%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT N+F+LESKSTIGVEFATR+I ++K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNLESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A FA+ F ETSAL S NV+ AF E++T IY+++S+ +++G D
Sbjct: 129 DLSHLRAVPTEEAKNFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGSD 188
Query: 189 PAALPKGQTINV 200
G + N+
Sbjct: 189 NNGSGNGASNNI 200
>gi|403300397|ref|XP_003940927.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 155
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/141 (86%), Positives = 134/141 (95%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAER 147
K+DLRHLRAV T++A AFAE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|332205939|ref|NP_001193765.1| ras-related protein Rab-11A isoform 2 [Homo sapiens]
gi|332235942|ref|XP_003267164.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Nomascus
leucogenys]
gi|332844085|ref|XP_003314767.1| PREDICTED: uncharacterized protein LOC453523 isoform 1 [Pan
troglodytes]
gi|397515598|ref|XP_003828036.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Pan paniscus]
gi|402874625|ref|XP_003901133.1| PREDICTED: ras-related protein Rab-11A isoform 2 [Papio anubis]
gi|426379451|ref|XP_004056411.1| PREDICTED: ras-related protein Rab-11A isoform 3 [Gorilla gorilla
gorilla]
gi|194390126|dbj|BAG61825.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 122/141 (86%), Positives = 134/141 (95%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAER 147
K+DLRHLRAV T++A AFAE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEK 145
>gi|168062057|ref|XP_001783000.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665517|gb|EDQ52199.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 215
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 164/218 (75%), Gaps = 9/218 (4%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
+Y+ + DYLFKVVLIGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ D K V
Sbjct: 2 SYQDEQSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNSNSKATIGVEFQTQSMEIDGKEV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+V+D+TR TFENV RWL EL+ H+DS++V+M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVFDITRRGTFENVSRWLDELKVHSDSSVVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL H+R V+ E+ATA AE FMETSALES+NV AF VL +I+++VS+KA
Sbjct: 122 LVGNKSDLAHIREVTVEEATALAENNAMSFMETSALESVNVAEAFQTVLKEIHKIVSKKA 181
Query: 183 LEIGDDP----AALPKGQTINVGTKDDVSAVKKVGCCS 216
L DP + GQ + G DD + + GCCS
Sbjct: 182 LTA--DPNKSNTVVASGQRLAGG--DDTTP-RTGGCCS 214
>gi|297798036|ref|XP_002866902.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
gi|297312738|gb|EFH43161.1| hypothetical protein ARALYDRAFT_490786 [Arabidopsis lyrata subsp.
lyrata]
Length = 227
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 162/213 (76%), Gaps = 7/213 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL----EIG 186
RAV TEDA FAE+E FF+ETSAL + NVEN+F ++T+IY V++K L G
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTEIYNTVNKKNLASVENQG 194
Query: 187 D--DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
D +P +L + + G+ D+ A K CCS+
Sbjct: 195 DSNNPGSLAGKKIVIPGSGQDIPA-KTSTCCSS 226
>gi|50980848|gb|AAT91270.1| putative Rab GTPase [Paxillus involutus]
gi|50980850|gb|AAT91271.1| GTPase [Paxillus involutus]
gi|50980852|gb|AAT91272.1| GTPase [Paxillus involutus]
Length = 161
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 140/161 (86%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI D K VKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSINVDSKTVKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+++H T+ NV RWLKELRDH DSNIVIMLVGNK+DL+HLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
V TE+A F+ F+ETSAL++ NVE+AF +LT +YR
Sbjct: 121 VPTEEAKNFSAENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 122/165 (73%), Positives = 144/165 (87%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+T+NEF+LESKSTIGVEFATRSI+ D+K +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+++H T+ENV++WLKELRDH D +IVIMLVGNK+DLRHLR
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADPSIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
V TE+A FA+R N F+ETSAL S NVE AF +L +IY+ V R
Sbjct: 121 VPTEEAKNFAQRNNLSFIETSALHSTNVETAFHTILQEIYKNVVR 165
>gi|365990545|ref|XP_003672102.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
gi|343770876|emb|CCD26859.1| hypothetical protein NDAI_0I02910 [Naumovozyma dairenensis CBS 421]
Length = 219
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 154/195 (78%), Gaps = 3/195 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I + K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WL EL+++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELKENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA F ETSAL S NV+ AF E++T IY++VS+ +++GD
Sbjct: 129 DLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 189 P---AALPKGQTINV 200
A PKG TI++
Sbjct: 189 NTSGATAPKGPTISL 203
>gi|226088538|dbj|BAH37015.1| NtRab11D [Nicotiana tabacum]
Length = 222
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 162/217 (74%), Gaps = 7/217 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQ
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML+G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-- 183
NK DL RAV TEDA FA++E FF+ETSA+E+ NVE+AF VLT+I+ +V++K L
Sbjct: 128 NKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNVEDAFLTVLTEIFNIVNKKNLAA 187
Query: 184 ---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ +PA+L G+ I V V KK CCS+
Sbjct: 188 DENQSNGNPASL-TGKKILVPGPGQVIPGKK-ACCSS 222
>gi|148678258|gb|EDL10205.1| mCG22989, isoform CRA_a [Mus musculus]
Length = 149
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/141 (86%), Positives = 134/141 (95%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAER 147
K+DLRHLRAV T++A AFAE+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEQ 145
>gi|303738|dbj|BAA02110.1| GTP-binding protein [Pisum sativum]
gi|738935|prf||2001457C GTP-binding protein
Length = 225
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 161/216 (74%), Gaps = 4/216 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ DY+FKVVLIGDS VGKS +L+RF+RNEFSL+SKSTIGVEF TR++ D K VKAQ
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+LVG
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG 129
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL + R V TEDA FAE+E FF+ETSAL++ NVE +F VLT+IY ++++K L
Sbjct: 130 NKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNILNKKNLAA 189
Query: 186 ----GDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G+ +A GQ I + K CC +
Sbjct: 190 DESQGNGNSASLLGQKIVIPGPGQEVPAKSSMCCQS 225
>gi|348513149|ref|XP_003444105.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 210
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 163/210 (77%), Gaps = 4/210 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+DD Y+++FKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR++R D+ +KAQ
Sbjct: 3 SDDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFAHDSRTTIGVEFSTRTVRIDNLTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL DH D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL +LR V T++A FAE++ FMETSAL+S NVE AF+EVLT I+ V+ + +
Sbjct: 123 NKSDLENLRTVPTDEARDFAEKKGLMFMETSALDSTNVEAAFSEVLTAIHTKVASREVTR 182
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G A +G + +K GCC
Sbjct: 183 GSISAVTLSSP---IGPSSEAQEERK-GCC 208
>gi|254567101|ref|XP_002490661.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|238030457|emb|CAY68381.1| GTPase of the Ypt/Rab family, very similar to Ypt31p [Komagataella
pastoris GS115]
gi|328351047|emb|CCA37447.1| GTP-binding protein YPT32/YPT11 [Komagataella pastoris CBS 7435]
Length = 220
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YLFK+VL+G+S VGKSNLLSRFTR+EF++ESK+TIGVEFATR+I D K +KAQIWD
Sbjct: 11 DYEYLFKIVLVGESSVGKSNLLSRFTRDEFNIESKTTIGVEFATRTIEVDGKRIKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRA+T+AYYRGAVGALLVYD++ ++E RWL EL+DH D+NIV+ LVGNK+
Sbjct: 71 TAGQERYRAVTAAYYRGAVGALLVYDISNSSSYEGASRWLSELKDHADANIVVELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI--- 185
DL HLRAV T++A +FA + F E SAL S NVE AF +++ IY +VS+ ++
Sbjct: 131 DLNHLRAVPTDEAKSFATEKGLLFTEASALNSENVELAFQQLIKAIYDMVSKHQFDMNDY 190
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G+D + GQTI + S +KK CC
Sbjct: 191 GNDNKPITGGQTITLTPTPKDSKIKKDSCC 220
>gi|15236099|ref|NP_195709.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
gi|75337421|sp|Q9SMQ6.1|RAA4B_ARATH RecName: Full=Ras-related protein RABA4b; Short=AtRABA4b; AltName:
Full=Ras-related protein GB3; Short=AtGB3; AltName:
Full=Ras-related protein Rab11G; Short=AtRab11G
gi|4490750|emb|CAB38912.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|7271054|emb|CAB80662.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|18253027|gb|AAL62440.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|22136472|gb|AAM91314.1| GTP-binding protein GB3 [Arabidopsis thaliana]
gi|332661750|gb|AEE87150.1| RAB GTPase homolog A4B [Arabidopsis thaliana]
Length = 224
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 162/210 (77%), Gaps = 4/210 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI-GD-- 187
RAV TEDA FAE+E FF+ETSAL + NVEN+F ++TQIY V++K L GD
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+P +L + + G+ ++ A K CC++
Sbjct: 195 NPGSLAGKKILIPGSGQEIPA-KTSTCCTS 223
>gi|50980854|gb|AAT91273.1| GTPase [Paxillus involutus]
gi|50980856|gb|AAT91274.1| GTPase [Paxillus involutus]
Length = 161
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 140/161 (86%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI D K VKAQIWDTAGQERY
Sbjct: 1 VVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSISVDGKTVKAQIWDTAGQERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLVYD+++H T+ NV RWLKELRDH DSNIVIMLVGNK+DL+HLRA
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKSDLKHLRA 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
V TE+A F+ F+ETSAL++ NVE+AF +LT +YR
Sbjct: 121 VPTEEAKNFSTENELSFIETSALDASNVESAFQTILTDVYR 161
>gi|452821640|gb|EME28668.1| Rab family, other [Galdieria sulphuraria]
Length = 217
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 161/212 (75%), Gaps = 2/212 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKAQ 65
++++DYLFK+VL+GDSGVGKSNLL RFTRNEF L+SKSTIGVEFAT++I +D K+VKAQ
Sbjct: 6 EEEHDYLFKIVLVGDSGVGKSNLLWRFTRNEFHLDSKSTIGVEFATKTIHLEDGKVVKAQ 65
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERY+AIT+AYYRGA GALLVYD+T+ + EN+ RWL+ELR+H D+ +V+MLVG
Sbjct: 66 IWDTAGQERYKAITAAYYRGAFGALLVYDITQRASLENIPRWLRELREHVDNQMVVMLVG 125
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-E 184
NK DLRHLR V E AE E F+ETSAL+S NVE AFT+++ +IYR++ +KAL
Sbjct: 126 NKCDLRHLRQVEIEQGKKLAEEEGLLFLETSALDSTNVEEAFTQLIREIYRLMKKKALVN 185
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
AL + T+ + + KK CC+
Sbjct: 186 ESTQSFALKQDNTVVIRDPSAAKSSKKKKCCT 217
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 158/212 (74%), Gaps = 7/212 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVI+LVGNK DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHADKNIVIILVGNKCDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD--- 187
R V TEDA FA++E FF+ETSALES NVE AF VLT+I+ +V++K L D
Sbjct: 135 ESQRVVPTEDAKEFAQKEGLFFLETSALESTNVETAFLTVLTEIFNIVNKKTLAGADNQT 194
Query: 188 --DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+PA+L + + G + +K CCS+
Sbjct: 195 NGNPASLGGKKIVVPGPAQVIP--EKSKCCSS 224
>gi|412990280|emb|CCO19598.1| unknown [Bathycoccus prasinos]
Length = 212
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/185 (68%), Positives = 149/185 (80%), Gaps = 15/185 (8%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
DDYDYLFK+VLIGDSGVGKSN+LSRFTRNEFS+ESKSTIGVEFATRSI + K+VKAQIW
Sbjct: 6 DDYDYLFKIVLIGDSGVGKSNILSRFTRNEFSVESKSTIGVEFATRSIEIEKKVVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRH---------------VTFENVERWLKELR 112
DTAGQERYRAITSAYYRGAVGALLVYDVT+ TF +VE+WL ELR
Sbjct: 66 DTAGQERYRAITSAYYRGAVGALLVYDVTKKGTAITKEIKLISYSLETFADVEKWLAELR 125
Query: 113 DHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
DH DS IVIML GNK DL+HLR+V+T+DA +A +E+ F+ETSAL S+N++ AF +VL+
Sbjct: 126 DHADSKIVIMLTGNKCDLQHLRSVTTQDAEIYAAKEDLLFLETSALNSVNIDAAFQKVLS 185
Query: 173 QIYRV 177
I+ V
Sbjct: 186 VIHEV 190
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 164/209 (78%), Gaps = 4/209 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+ D+L K+VLIGDSGVGK+NLLSRF R++F+ +SKSTIGVEFAT+++ + K VKAQIWD
Sbjct: 5 EPDFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWD 64
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGA+GALL+YD+T +TF ++ RWL+ELR++ DSNIV+MLVGNK+
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKS 124
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL+ LRAVSTED T F+++EN F+ETSA + NV+ AFT ++T+I +S++ + D
Sbjct: 125 DLQELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNIVSPDS 184
Query: 189 PAAL-P-KGQTINVGTKDDVSAVKKVGCC 215
PA + P KG TI T DD KK CC
Sbjct: 185 PAKVGPNKGVTITSTTADDKK--KKNTCC 211
>gi|1184985|gb|AAA87884.1| ATGB3 [Arabidopsis thaliana]
Length = 224
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 161/210 (76%), Gaps = 4/210 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI---GD 187
RAV TEDA FAE+E FF+ETSAL + NVEN+F ++TQIY V++K L +
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASECDSN 194
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+P +L + + G+ ++ A K CC++
Sbjct: 195 NPGSLAGKKILIPGSGQEIPA-KTSTCCTS 223
>gi|388522627|gb|AFK49375.1| unknown [Medicago truncatula]
Length = 225
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 164/217 (75%), Gaps = 6/217 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ DY+FKVVLIGDS VGKS +L+RF+RNEFSL+SKSTIGVEF TR++ D K VKAQ
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSRNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+LVG
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG 129
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL + R V TEDA FAE+E FF+ETSAL++ NVE +F VLT+IY V++K L
Sbjct: 130 NKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNTVNKKNLAA 189
Query: 186 ----GDDPAALPKGQTINV-GTKDDVSAVKKVGCCSN 217
G+ +A GQ I + G ++ A K CC +
Sbjct: 190 DESQGNGNSASLLGQKIIIPGPAQEIPA-KSNMCCQS 225
>gi|326935770|ref|XP_003213940.1| PREDICTED: ras-related protein Rab-11A-like, partial [Meleagris
gallopavo]
Length = 252
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/160 (76%), Positives = 142/160 (88%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
L VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D+K VKAQIWDTAGQ
Sbjct: 17 LHPVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQ 76
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
ERYRAITSAYYRGAVGALLVYD+ +++T+EN ERWL EL+DH D+NI+IMLVGNK+DLRH
Sbjct: 77 ERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLTELQDHADANIIIMLVGNKSDLRH 136
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
LRAV T++A +FAE+ F+ETSAL+S NVE AF +L+
Sbjct: 137 LRAVPTDEARSFAEKNGLSFLETSALDSTNVEMAFHNILS 176
>gi|254583127|ref|XP_002499295.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
gi|238942869|emb|CAR31040.1| ZYRO0E08492p [Zygosaccharomyces rouxii]
Length = 218
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 160/210 (76%), Gaps = 3/210 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT N+F++ESKSTIGVEFATR+I + K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD- 187
DL HLRAV T++A FA+ F ETSAL+S NV+ AF E++T IY++VS+ +++GD
Sbjct: 129 DLDHLRAVPTDEAKNFAQENQLLFTETSALKSENVDLAFRELITAIYQMVSKHQVDLGDA 188
Query: 188 -DPAALPKGQTINVGTKDDVSAVKKV-GCC 215
PKG TI++ + + K CC
Sbjct: 189 NTQGNAPKGPTISLTPAPNENKKKSANNCC 218
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 126/200 (63%), Positives = 157/200 (78%), Gaps = 1/200 (0%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+T+NEF+LESKSTIGVEFAT+SI+ D+K +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RA+TSA YRGAVGALLVYD+++H T+ENV++WLKELRD D +IVIMLVGNK+DLRHLR
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADPSIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP-AALPK 194
V TE+A +FA+R N F+ETSA +S NVE+AF +L +IY+ V R GDD ++ P+
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDDSKSSKPE 180
Query: 195 GQTINVGTKDDVSAVKKVGC 214
G I V + K C
Sbjct: 181 GGEIVVNVDEGGGDKSKCPC 200
>gi|351705520|gb|EHB08439.1| Ras-related protein Rab-11A, partial [Heterocephalus glaber]
Length = 207
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/206 (60%), Positives = 153/206 (74%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAG 71
+LFKVVLIG SG G+SNLLSRF RNEF+L+SKST G++FATRSI+ D K +KAQIWDTAG
Sbjct: 1 HLFKVVLIGHSGAGESNLLSRFIRNEFNLDSKSTSGIQFATRSIQVDGKTIKAQIWDTAG 60
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
QER RA TSAYYR A+GALLV+D+ +H+T+ENVERWLKE RDH DSNIVIMLV NK+DL
Sbjct: 61 QERCRATTSAYYREALGALLVFDIAKHLTYENVERWLKEPRDHADSNIVIMLVRNKSDLC 120
Query: 132 HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAA 191
HLRAV T++A AFAE+ F+E+SAL NVE AF +LT+IYR VS+K + +
Sbjct: 121 HLRAVPTDEARAFAEKNGLPFIESSALHWTNVEAAFQTILTEIYRTVSQKQISDRRENDM 180
Query: 192 LPKGQTINVGTKDDVSAVKKVGCCSN 217
P + + + K+ CC N
Sbjct: 181 SPSSNMVPIHVPPTTESKPKMQCCQN 206
>gi|6320869|ref|NP_010948.1| Ypt31p [Saccharomyces cerevisiae S288c]
gi|586807|sp|P38555.3|YPT31_YEAST RecName: Full=GTP-binding protein YPT31/YPT8; AltName: Full=Rab
GTPase YPT31
gi|425713|gb|AAA83385.1| GTPase-activating protein [Saccharomyces cerevisiae]
gi|603623|gb|AAB64564.1| Ypt31p [Saccharomyces cerevisiae]
gi|927541|emb|CAA51354.1| Ypt31p [Saccharomyces cerevisiae]
gi|151944741|gb|EDN63000.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|207346004|gb|EDZ72632.1| YER031Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271138|gb|EEU06231.1| Ypt31p [Saccharomyces cerevisiae JAY291]
gi|259145939|emb|CAY79199.1| Ypt31p [Saccharomyces cerevisiae EC1118]
gi|285811656|tpg|DAA07684.1| TPA: Ypt31p [Saccharomyces cerevisiae S288c]
gi|323305223|gb|EGA58970.1| Ypt31p [Saccharomyces cerevisiae FostersB]
gi|323309378|gb|EGA62595.1| Ypt31p [Saccharomyces cerevisiae FostersO]
gi|323333919|gb|EGA75308.1| Ypt31p [Saccharomyces cerevisiae AWRI796]
gi|323337933|gb|EGA79172.1| Ypt31p [Saccharomyces cerevisiae Vin13]
gi|323348967|gb|EGA83203.1| Ypt31p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355434|gb|EGA87258.1| Ypt31p [Saccharomyces cerevisiae VL3]
gi|349577689|dbj|GAA22857.1| K7_Ypt31p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365766056|gb|EHN07557.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299721|gb|EIW10813.1| Ypt31p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 223
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 159/215 (73%), Gaps = 8/215 (3%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYD LFK+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ D K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD- 187
DL HLRAV TE++ FA+ F ETSAL S NV+ AF E++ IY+ VS+ +++GD
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 188 ------DPAALPKGQTINV-GTKDDVSAVKKVGCC 215
+ A+ P G TI++ T ++ CC
Sbjct: 189 SANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|156838761|ref|XP_001643080.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113672|gb|EDO15222.1| hypothetical protein Kpol_423p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 220
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 5/212 (2%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF LESKSTIGVEFATR+I D K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFHLESKSTIGVEFATRTIDVDGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKQSSYENCNHWLAELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG-- 186
DL HLRAV T++A FA+ F ETSAL S NV+ AF E++T IY+++S+ +++G
Sbjct: 129 DLSHLRAVPTDEAKKFAQENQLLFTETSALNSENVDQAFRELITSIYQMISKHQVDLGVD 188
Query: 187 --DDPAALPKGQTINV-GTKDDVSAVKKVGCC 215
++ PKG TI++ ++ CC
Sbjct: 189 NNNNTLNAPKGPTISLTPAPNEKKKSSSNNCC 220
>gi|260949821|ref|XP_002619207.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
gi|238846779|gb|EEQ36243.1| hypothetical protein CLUG_00366 [Clavispora lusitaniae ATCC 42720]
Length = 220
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 162/210 (77%), Gaps = 3/210 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKELR+H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELREHADANIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A +FA N F E SAL S NV+ +F ++L IY ++S+ L+ D
Sbjct: 131 DLDHLRAVPTEEAKSFATENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDT 190
Query: 189 -PAALPK-GQTINV-GTKDDVSAVKKVGCC 215
++ P G TI++ + + K CC
Sbjct: 191 VGSSKPSGGPTISLTPAPQEKRSGKNSNCC 220
>gi|255632197|gb|ACU16457.1| unknown [Glycine max]
Length = 229
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/212 (60%), Positives = 160/212 (75%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ D K VKAQIWDTA
Sbjct: 18 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 77
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+L GNK DL
Sbjct: 78 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILTGNKCDL 137
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI----G 186
+ R V T DA FAE+E FF+ETSALE+ NVE AF VLT+IY +V++K L G
Sbjct: 138 ENQRDVPTGDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADENQG 197
Query: 187 DDPAALPKGQTINV-GTKDDVSAVKKVGCCSN 217
+ +A GQ I V G ++ A + + C S+
Sbjct: 198 NGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 229
>gi|225456136|ref|XP_002281955.1| PREDICTED: ras-related protein RABA6b [Vitis vinifera]
gi|297734313|emb|CBI15560.3| unnamed protein product [Vitis vinifera]
Length = 218
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 163/218 (74%), Gaps = 3/218 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M A DD+ DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+I+ DK
Sbjct: 1 MAADSFDDECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIKVGDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQER+RAITS+YYRGA+GALLVYD+TR TFEN+++WL+ELRD ++V
Sbjct: 61 LIKAQIWDTAGQERFRAITSSYYRGALGALLVYDITRRATFENLKKWLRELRDFGKPDMV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
I+LVGNK+DL H R V E+ AE E FMETSALE++NVE AF ++T+I+ V S+
Sbjct: 121 IVLVGNKSDLGHSREVDEEEGKTLAETEGLCFMETSALENLNVEEAFLHMITKIHEVTSQ 180
Query: 181 KALE--IGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K LE + + L G+ I + +VSA K+ CCS
Sbjct: 181 KNLEAKLNEPVKPLIIGKEI-IHVDHEVSATKQSSCCS 217
>gi|363746030|ref|XP_003643501.1| PREDICTED: ras-related protein Rab-11A-like, partial [Gallus
gallus]
Length = 156
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 122/156 (78%), Positives = 140/156 (89%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D+K VKAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 136
AITSAYYRGAVGALLVYD+ +++T+EN ERWL EL+DH D+NIVIMLVGNK+DLRHLRAV
Sbjct: 61 AITSAYYRGAVGALLVYDIAKYLTYENAERWLAELQDHADANIVIMLVGNKSDLRHLRAV 120
Query: 137 STEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
T++A +FAER F+ETSAL+S NVE AF +L+
Sbjct: 121 PTDEARSFAERNGLSFLETSALDSTNVETAFHNILS 156
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/212 (60%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL++H DSNIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI--- 185
DL HLRAV TE+A FA+ N F+E SAL S NV+ +F ++L IY ++S+ L+
Sbjct: 131 DLDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 186 -GDDPAALPKGQTINVGTKDDVSAVKKV-GCC 215
G + G TI++ K GCC
Sbjct: 191 GGVNKPTTAGGPTISLTPAPQSKKNKNNGGCC 222
>gi|356567670|ref|XP_003552040.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 223
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 162/215 (75%), Gaps = 7/215 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K +KAQ
Sbjct: 10 ANQKVDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSIKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR+H D NIVI+L+G
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRNHADKNIVIILIG 129
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-- 183
NK+DL + R V TEDA FAE+E FF+ETSALE+ NVE AF VLT+I+ ++++K L
Sbjct: 130 NKSDLENQRQVPTEDAKEFAEKEGLFFLETSALEATNVETAFMTVLTEIFNIINKKNLAA 189
Query: 184 ---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ D+ A+L + I G ++ K+ CC
Sbjct: 190 SDNQGNDNSASLSGKKIIVPGPAQEIP--KRSMCC 222
>gi|190405593|gb|EDV08860.1| GTP-binding protein YPT31/YPT8 [Saccharomyces cerevisiae RM11-1a]
Length = 223
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 158/215 (73%), Gaps = 8/215 (3%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYD LFK+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ D K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR+ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREKADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD- 187
DL HLRAV TE++ FA+ F ETSAL S NV+ AF E++ IY+ VS+ +++GD
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 188 ------DPAALPKGQTINV-GTKDDVSAVKKVGCC 215
+ A+ P G TI++ T ++ CC
Sbjct: 189 SANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|50285709|ref|XP_445283.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524587|emb|CAG58189.1| unnamed protein product [Candida glabrata]
Length = 218
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 152/194 (78%), Gaps = 2/194 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT NEF+++SKSTIGVEFATR+I D K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIDSKSTIGVEFATRTIDVDGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCHHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI--G 186
DL HLRAV TE+A FA F ETSAL S NV+ AF E++T I++ VS+ +E+
Sbjct: 129 DLAHLRAVPTEEAKQFASENQLLFTETSALNSDNVDLAFKELITAIHQKVSKHQVELSNA 188
Query: 187 DDPAALPKGQTINV 200
+ P A P G TI++
Sbjct: 189 NKPGAGPNGPTISL 202
>gi|146414846|ref|XP_001483393.1| hypothetical protein PGUG_04122 [Meyerozyma guilliermondii ATCC
6260]
Length = 218
Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/208 (59%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGD GVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D + VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDLGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGRRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDILKTESYESVSRWLKELKEHADTNIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A FA + F E SAL S NV+ +F ++L IY ++S+ L+ D
Sbjct: 131 DLDHLRAVPTEEAKLFANENSLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDQ 190
Query: 189 PAALPKGQTINV-GTKDDVSAVKKVGCC 215
A P G TI++ + CC
Sbjct: 191 GAQKPSGPTISLTPAPQEKKGKNNSNCC 218
>gi|21617896|gb|AAM66946.1| GTP-binding protein GB3 [Arabidopsis thaliana]
Length = 224
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 161/210 (76%), Gaps = 4/210 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF R+EFS++SK+TIGVEF TR++ + K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TFE++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI-GD-- 187
RAV TEDA FAE+E FF+ETSAL + NVEN+F ++TQIY V++K L GD
Sbjct: 135 EDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSN 194
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+P +L + + + ++ A K CC++
Sbjct: 195 NPGSLAGKKILIPASGQEIPA-KTSTCCTS 223
>gi|126138088|ref|XP_001385567.1| hypothetical protein PICST_68134 [Scheffersomyces stipitis CBS
6054]
gi|126092845|gb|ABN67538.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 220
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + T+E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTETYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A FA N F E SAL S NV+ +F ++L IY ++S+ L+ D
Sbjct: 131 DLDHLRAVPTEEARNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNDG 190
Query: 189 PAALPK--GQTINV-GTKDDVSAVKKVGCC 215
+ P G TI++ + + CC
Sbjct: 191 GSNKPTTGGPTISLTPAPQEKRSKNNSNCC 220
>gi|410081132|ref|XP_003958146.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
gi|372464733|emb|CCF59011.1| hypothetical protein KAFR_0F04160 [Kazachstania africana CBS 2517]
Length = 245
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 153/197 (77%), Gaps = 5/197 (2%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I + K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEMEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA F ETSAL S NV+ AF E++T IY++VS+ +++GD
Sbjct: 129 DLAHLRAVPTDEAKNFALENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLGDS 188
Query: 189 P-----AALPKGQTINV 200
PKG TI++
Sbjct: 189 GNNDINNGTPKGPTISL 205
>gi|118387620|ref|XP_001026914.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila]
gi|89308681|gb|EAS06669.1| Ras-related protein Rab11A, putative [Tetrahymena thermophila
SB210]
gi|307777774|dbj|BAJ21283.1| Rab-family small GTPase Rab11B [Tetrahymena thermophila]
Length = 214
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 159/213 (74%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A + +D+YD+LFK+VLIGDSGVGK+NLLSRFT+NEF+++SK TIGVEFAT+++ ++K +
Sbjct: 2 ASKNEDEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKYI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQE+YRAIT+AYYRGAVGAL +YD+T+ TF+NV++WL ELR++ D+NI+ M
Sbjct: 62 KAQIWDTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIICM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL+ +R V TEDA FAE N FMETSA +++NV+ AF +++T+IY + +
Sbjct: 122 LIGNKCDLQEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKTRP 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
E G I K A K+ CC
Sbjct: 182 NEEKKKAQPQQNGNNIIKDFKQPTQAEKEKKCC 214
>gi|356528455|ref|XP_003532818.1| PREDICTED: ras-related protein Rab11A-like [Glycine max]
Length = 209
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 151/192 (78%), Gaps = 4/192 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SKSTIGVEF TR++ D K VKAQIWDTA
Sbjct: 16 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTA 75
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+L+GNK DL
Sbjct: 76 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDL 135
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI----G 186
R V TEDA FAE+E FF+ETSALE+ NVE AF VLT+IY +V++K L G
Sbjct: 136 ESQRDVPTEDAKEFAEKEGLFFLETSALEATNVETAFITVLTEIYNIVNKKNLTADENQG 195
Query: 187 DDPAALPKGQTI 198
+ +A GQ I
Sbjct: 196 NGNSASLSGQKI 207
>gi|354545830|emb|CCE42558.1| hypothetical protein CPAR2_202010 [Candida parapsilosis]
Length = 221
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 159/211 (75%), Gaps = 4/211 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A FA N F E SAL S NV+ +F ++L IY ++S+ L+ +
Sbjct: 131 DLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 189 PA--ALPKGQTINV--GTKDDVSAVKKVGCC 215
A G TI++ K+ S+ CC
Sbjct: 191 GGLKAASNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|217071438|gb|ACJ84079.1| unknown [Medicago truncatula]
Length = 225
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/217 (59%), Positives = 164/217 (75%), Gaps = 6/217 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ DY+FKVVLIGDS VGKS +L+RF+ NEFSL+SKSTIGVEF TR++ D K VKAQ
Sbjct: 10 ANQRIDYVFKVVLIGDSAVGKSQILARFSGNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQ 69
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR+H D NIVI+LVG
Sbjct: 70 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILVG 129
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL + R V TEDA FAE+E FF+ETSAL++ NVE +F VLT+IY +V++K L
Sbjct: 130 NKSDLENQRDVPTEDAKEFAEKEGLFFLETSALQATNVEASFMTVLTEIYNIVNKKNLAA 189
Query: 186 ----GDDPAALPKGQTINV-GTKDDVSAVKKVGCCSN 217
G+ +A GQ I + G ++ A K CC +
Sbjct: 190 DESQGNGNSASLLGQKIIIPGPAQEIPA-KSNMCCQS 225
>gi|401839461|gb|EJT42683.1| YPT31-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 223
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 159/215 (73%), Gaps = 8/215 (3%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYD LFK+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ D K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD- 187
DL HLRAV TE++ FA+ F ETSAL S NV+ AF E++ IY+ VS+ +++GD
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDEAFEELINTIYQKVSKHQMDLGDS 188
Query: 188 ------DPAALPKGQTINV-GTKDDVSAVKKVGCC 215
+ A+ P G TI++ T ++ CC
Sbjct: 189 STNGNVNGASAPNGPTISLTPTPNENKNGSGNNCC 223
>gi|187609401|pdb|3CPJ|B Chain B, Crystal Structure Of Ypt31 In Complex With Yeast Rab-Gdi
Length = 223
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 159/215 (73%), Gaps = 8/215 (3%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYD LFK+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ + K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD- 187
DL HLRAV TE++ FA+ F ETSAL S NV+ AF E++ IY+ VS+ +++GD
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 188 ------DPAALPKGQTINV-GTKDDVSAVKKVGCC 215
+ A+ P G TI++ T ++ CC
Sbjct: 189 SANGNANGASAPNGPTISLTPTPNENKKANGNNCC 223
>gi|182890006|gb|AAI65926.1| Rab25 protein [Danio rerio]
Length = 210
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 163/211 (77%), Gaps = 5/211 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D Y+++FKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TRS++ D +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL DH D +IV+MLVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL +R V TE+A FA+ + FMETSALES NVE+AF EVLT I++ V+ K + G
Sbjct: 124 KNDLATVRTVPTEEAKDFADANDLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+A+ GQT G + + GCC N
Sbjct: 184 -SISAVTLGQTH--GPSREFQESR--GCCKN 209
>gi|448525743|ref|XP_003869190.1| Ypt31 protein [Candida orthopsilosis Co 90-125]
gi|380353543|emb|CCG23053.1| Ypt31 protein [Candida orthopsilosis]
Length = 221
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 127/211 (60%), Positives = 159/211 (75%), Gaps = 4/211 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A FA N F E SAL S NV+ +F ++L IY ++S+ L+ +
Sbjct: 131 DLDHLRAVPTEEARNFALENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 189 PA--ALPKGQTINV--GTKDDVSAVKKVGCC 215
A G TI++ K+ S+ CC
Sbjct: 191 GGLKAPSNGPTISLTPAPKEKKSSKNNSNCC 221
>gi|56693355|ref|NP_001008641.1| ras-related protein Rab-25 [Danio rerio]
gi|56270511|gb|AAH86715.1| RAB25, member RAS oncogene family [Danio rerio]
Length = 210
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 130/211 (61%), Positives = 162/211 (76%), Gaps = 5/211 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D Y+++FKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TRS++ D +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL DH D +IV+MLVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL +R V TE+A FA+ FMETSALES NVE+AF EVLT I++ V+ K + G
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+A+ GQT G + + GCC N
Sbjct: 184 -SISAVTLGQTH--GPSREFQESR--GCCKN 209
>gi|432883282|ref|XP_004074246.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 211
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/210 (58%), Positives = 163/210 (77%), Gaps = 4/210 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
++D Y+++FKVVLIG+SGVGKSNLLSRFT+NEF +S++TIGVEF+TR+++ ++ I+KAQ
Sbjct: 3 SEDSYNFVFKVVLIGESGVGKSNLLSRFTKNEFRHDSRTTIGVEFSTRTVQLENFIIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL DH D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+ R V TE+A FA+ + FMETSAL+S NVE+AF EVLT I++ V+ + +
Sbjct: 123 NKSDLQSQRTVPTEEAQHFADEKGLMFMETSALDSTNVESAFHEVLTAIHKKVASREVTR 182
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G A G +G + +K GCC
Sbjct: 183 GSISAVTLSGP---IGLNSEQQEERK-GCC 208
>gi|357463299|ref|XP_003601931.1| GTP-binding protein [Medicago truncatula]
gi|355490979|gb|AES72182.1| GTP-binding protein [Medicago truncatula]
gi|388518511|gb|AFK47317.1| unknown [Medicago truncatula]
Length = 222
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 162/215 (75%), Gaps = 7/215 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A+ DY+FKVVLIGDS VGKS +L+RF RN+FS++SK+TIGVEF TR++ + K VKAQ
Sbjct: 9 ANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSMDSKATIGVEFQTRTLVIEHKSVKAQ 68
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR+H D NIVI+L+G
Sbjct: 69 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIG 128
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL RAV TEDA FAE+E FF+ETSAL++ NVE AF VLT+I+ +V++K L
Sbjct: 129 NKSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNKKNLAA 188
Query: 186 GD-----DPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ + A+L + I G ++ KK CC
Sbjct: 189 DENQGNGNSASLSGKKIIVPGPAQEIP--KKSMCC 221
>gi|384484365|gb|EIE76545.1| GTP-binding protein [Rhizopus delemar RA 99-880]
Length = 223
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFK+VLIGDSGVGKSNLLSRFT NEF+LESKSTIGVEFAT+++ D+ VKAQI
Sbjct: 2 DDEYDYLFKLVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATKNLEIDNHTVKAQI 61
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDT+GQERYRAIT AYYRGAVGALLVYD+TR +F+NV+ WLKELRDH D NIVIMLVGN
Sbjct: 62 WDTSGQERYRAITGAYYRGAVGALLVYDITRQSSFQNVQHWLKELRDHADPNIVIMLVGN 121
Query: 127 KADLRH-LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
K DL R V+TED + AE+E F+ETSAL++ NV+ AF V IY + +K +
Sbjct: 122 KVDLSESSRQVTTEDGGSLAEQEGFLFVETSALDATNVDKAFATVFDTIYSNLPKKTNQS 181
Query: 186 GDDPAALP 193
D P
Sbjct: 182 ADAATNQP 189
>gi|365761030|gb|EHN02706.1| Ypt31p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 223
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 159/215 (73%), Gaps = 8/215 (3%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYD LFK+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ D K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD- 187
DL HLRAV TE++ FA+ F ETSAL S NV+ AF E++ IY+ VS+ +++GD
Sbjct: 129 DLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 188 ------DPAALPKGQTINV-GTKDDVSAVKKVGCC 215
+ A+ P G TI++ T ++ CC
Sbjct: 189 STNGNVNGASAPNGPTISLTPTPNENKNGGGNNCC 223
>gi|71480092|ref|NP_001025142.1| uncharacterized protein LOC574424 [Danio rerio]
gi|68533943|gb|AAH98608.1| Zgc:112037 [Danio rerio]
Length = 210
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 161/212 (75%), Gaps = 5/212 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+D+ Y+++FKVVLIG+SGVGKSNLLSRFT+NEFS +S++TIGVEF+TR+++ + +KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL DH D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADPHIVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL +R+V TEDA FAE+ F ETSALES+NVE AF VLT+I++ V+ K +
Sbjct: 123 NKSDLAAVRSVPTEDAKDFAEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEVTR 182
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G A T+++ K CC N
Sbjct: 183 GSISAVTLSQPKTPAETQEE-----KKTCCKN 209
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 165/212 (77%), Gaps = 8/212 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+D+ Y+++FKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR+++ ++ +KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL +H D +IV+ML+G
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPHIVVMLIG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL R+V TE+A FAE++ F+ETSAL+S NVE AFT VL +I++ VS K +
Sbjct: 123 NKSDLESERSVPTEEAKDFAEKKGLLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVVR 182
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G A T+N +D +K CC N
Sbjct: 183 GPMSAV-----TLNSPKAED---TEKKPCCKN 206
>gi|241959082|ref|XP_002422260.1| GTP-binding protein, putative; Rab GTPase, putative [Candida
dubliniensis CD36]
gi|223645605|emb|CAX40264.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|238880161|gb|EEQ43799.1| GTP-binding protein YPT31/YPT8 [Candida albicans WO-1]
Length = 219
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 156/209 (74%), Gaps = 2/209 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL++H D+NI+I LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE+A FA N F E SAL S NV+ +F ++L IY ++S+ LE D
Sbjct: 131 DLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDS 190
Query: 189 PAA-LPKGQTINVGTKDDVSAVKKV-GCC 215
G TI++ K GCC
Sbjct: 191 KQTNTAGGPTISLTPAPQEKKNKNNGGCC 219
>gi|117655459|gb|ABK55619.1| RAB 11-a [Euplotes octocarinatus]
Length = 231
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/172 (69%), Positives = 144/172 (83%), Gaps = 1/172 (0%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R +D+YDYL KVVLIGDSGVGKSNLLSRF +NEF+LESK+TIGVEF T++I C KI+KA
Sbjct: 4 RGEDEYDYLLKVVLIGDSGVGKSNLLSRFAKNEFNLESKTTIGVEFVTKTIECGSKIIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAV A LVYD+T+ TF+NVE+WL+EL+D+ DSNIV+MLV
Sbjct: 64 QIWDTAGQERYRAITSAYYRGAVAAFLVYDITKLHTFQNVEKWLQELKDYADSNIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
GNK DL +LRAV EDA +AE+ F+ETSAL+S NV AF +++ QIY
Sbjct: 124 GNKTDLNNLRAVKVEDAQIYAEKNELAFIETSALDSTNVVEAFEQII-QIYH 174
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 162/219 (73%), Gaps = 8/219 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
AD+ DY+FK+V+ GDSGVGKS LL+RF +NEF ++SK TIGVEF TR++ D K+VKAQ
Sbjct: 8 ADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERY+AIT+AYYRGA GALL YD+T+ TF++VE+WL ELR H D NI++MLVG
Sbjct: 68 IWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL LRAV TE A FA++E FF+ETSAL+S NVE+AF +L+Q+YR VSRK + +
Sbjct: 128 NKSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHILV 187
Query: 186 GDDPAALPK------GQTINVGTKDD--VSAVKKVGCCS 216
+ K G I V +++ +A K+ CCS
Sbjct: 188 DGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|406608029|emb|CCH40656.1| GTP-binding protein YPT31/YPT8 [Wickerhamomyces ciferrii]
Length = 218
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 158/209 (75%), Gaps = 2/209 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YLFK+VLIGDSGVGKSNLLSRFTRNEF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 10 DYEYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESRSTIGVEFATRTVEIDGKRVKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGALLVYD+++ ++ENV +WLKEL+++ D NIVI LVGNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALLVYDISKSESYENVSKWLKELKENADENIVIELVGNKS 129
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A F+ F E SAL + NV+ +F ++L I+ +VS+ ++ D
Sbjct: 130 DLDHLRAVPTDEAKQFSVENQLLFTEASALNAENVDLSFQQLLKSIHDMVSKHQFDMTDY 189
Query: 189 PAALPK-GQTINV-GTKDDVSAVKKVGCC 215
P G TI++ T + + K CC
Sbjct: 190 SGPKPSGGPTISLTPTPGNEQSKNKSNCC 218
>gi|363748106|ref|XP_003644271.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887903|gb|AET37454.1| hypothetical protein Ecym_1207 [Eremothecium cymbalariae
DBVPG#7215]
Length = 217
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ SKSTIGVEFATR+I + K VKAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLAELRENADENVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A +A+ F ETSAL + NV+ AF E++T IY++VS+ +++ +
Sbjct: 129 DLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSEK 188
Query: 189 PAA--LPKGQTINVGTKDDVSAVKKVGCC 215
+P+G TI++ + K CC
Sbjct: 189 SGGGTMPRGPTISLTPASNEKTKKSNNCC 217
>gi|225705282|gb|ACO08487.1| Ras-related protein Rab-11B [Oncorhynchus mykiss]
Length = 150
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/146 (80%), Positives = 134/146 (91%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIML GN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLAGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFF 152
K+DLRHLRAV T++A AFAE+ +
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNTILY 150
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 115/170 (67%), Positives = 145/170 (85%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D YDYL+K+VLIGDSGVGKS+LLSRFTRNEF +ESKSTIGVEFATRSI+ + KI+KAQ+W
Sbjct: 7 DHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVW 66
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGA+LVYD+T+ TF++VERWL E+R+H D IV+MLVGNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNK 126
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRV 177
DL+HLRAV+++DA + + F+E SAL++ NVE AF + +T+++ V
Sbjct: 127 CDLKHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITKLHHV 176
>gi|50412303|ref|XP_457123.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
gi|49652788|emb|CAG85116.1| DEHA2B03696p [Debaryomyces hansenii CBS767]
Length = 220
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/190 (63%), Positives = 152/190 (80%), Gaps = 5/190 (2%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKAESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI--- 185
DL HLRAV T++A FA N F E SAL S NV+ +F ++L IY ++S+ L+
Sbjct: 131 DLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEG 190
Query: 186 --GDDPAALP 193
G+ P+ P
Sbjct: 191 SNGNKPSGGP 200
>gi|145523367|ref|XP_001447522.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834407|emb|CAI44537.1| rab_B25 [Paramecium tetraurelia]
gi|124415033|emb|CAK80125.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+A+DDYDYLFKVVL GDSGVGKSNLL RFT+N+F+ +SK+TIGVEFATRSI KI+KA
Sbjct: 3 KAEDDYDYLFKVVLSGDSGVGKSNLLLRFTKNQFNPDSKTTIGVEFATRSISISGKIIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA+LVYD+T +FE+VERW++E+R++ D +IVIM++
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAIGAVLVYDITNKQSFESVERWIQEVRENADKDIVIMII 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL+HLRA+ TE A+ FME SA + NV+ AFT+++ QIY+ ++ K L+
Sbjct: 123 GNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFTQIIQQIYQNLT-KQLQ 181
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D + L +G+ +++ S KK GCC
Sbjct: 182 KYDQMSHL-QGEKLDLEIT--TSGNKKQGCC 209
>gi|3024503|sp|Q40520.1|RB11C_TOBAC RecName: Full=Ras-related protein Rab11C
gi|623576|gb|AAA74112.1| putative [Nicotiana tabacum]
Length = 222
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 160/217 (73%), Gaps = 7/217 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A DY+FKVVLIGDS VGK+ +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQ
Sbjct: 8 ASQKIDYVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRA+TSAYYRGAVGA+LVYD+T+ TF+++ RWL+ELR H D NIVIML G
Sbjct: 68 IWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-- 183
NK DL RAV TEDA FA++E FF+ETSA+E+ +E+AF VLT+I+ +V++K L
Sbjct: 128 NKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAA 187
Query: 184 ---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ +PA+L G+ I V V KK CCS+
Sbjct: 188 DENQSNSNPASL-TGKKILVPGPGQVIPGKK-ACCSS 222
>gi|346464621|gb|AEO32155.1| hypothetical protein [Amblyomma maculatum]
Length = 184
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 121/164 (73%), Positives = 139/164 (84%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF RNEFSL+SK+TIGVEF TR++ D + VKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLAIDKRTVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F++V RWL ELR H D NIVIML+GNK+DL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHVARWLNELRGHADKNIVIMLIGNKSDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
LRAV TEDA FAEREN FFMETS LES NVE+AF VLT+I
Sbjct: 133 GTLRAVPTEDAKEFAERENLFFMETSVLESXNVESAFQTVLTEI 176
>gi|356559913|ref|XP_003548240.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 244
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 164/221 (74%), Gaps = 8/221 (3%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
Y + DY+FKVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ + K++K
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINAKVIK 82
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW++ELR H DS+IVIML
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNKADL R V TEDA FAE + FF ETSAL NVE+AF ++L +I RVVS+KAL
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 184 EI------GDDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
E GD A KG +++ G + ++S +KK+ CS
Sbjct: 203 ECGLGKENGDTNVASLKGTKVDIILGPELEISEMKKLSSCS 243
>gi|448122797|ref|XP_004204534.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|448125077|ref|XP_004205092.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358249725|emb|CCE72791.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
gi|358350073|emb|CCE73352.1| Piso0_000385 [Millerozyma farinosa CBS 7064]
Length = 220
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDISKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA N F E SAL S NV+ +F ++L IY ++S+ L+ D
Sbjct: 131 DLDHLRAVPTDEAKNFANENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTSDG 190
Query: 189 PAA--LPKGQTINV-GTKDDVSAVKKVGCC 215
A G TI++ + + CC
Sbjct: 191 ANANKPSGGPTISLTPAPQEKKSKSSSNCC 220
>gi|403214005|emb|CCK68506.1| hypothetical protein KNAG_0B00580 [Kazachstania naganishii CBS
8797]
Length = 225
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 158/217 (72%), Gaps = 10/217 (4%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT NEF++ESKSTIGVEFATR+I + K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNIESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ T+EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSTYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA+ F ETSAL S NV+ AF E++T IY++VS+ +++ +
Sbjct: 129 DLAHLRAVPTDEAKNFAQENQLLFTETSALNSENVDQAFRELITAIYQMVSKHQVDLDNS 188
Query: 189 --------PAALPKGQTINVGTKDDVSAVKK--VGCC 215
P+G TI++ + + K CC
Sbjct: 189 NGQGAAGAGNGAPRGPTISLTPTPNEKSKKNSSSNCC 225
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 162/219 (73%), Gaps = 8/219 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
AD+ DY+FK+V+ GDSGVGKS LL+RF +NEF ++SK TIG+EF TR++ D K+VKAQ
Sbjct: 8 ADEGIDYMFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQ 67
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERY+AIT+AYYRGA GALL YD+T+ TF++VE+WL ELR H D NI++MLVG
Sbjct: 68 IWDTAGQERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKNILVMLVG 127
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL LRAV TE A FA++E FF+ETSAL+S NVE+AF +L+Q+YR VSRK + +
Sbjct: 128 NKSDLSSLRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKHILV 187
Query: 186 GDDPAALPK------GQTINVGTKDD--VSAVKKVGCCS 216
+ K G I V +++ +A K+ CCS
Sbjct: 188 DGHESNWDKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 226
>gi|302308393|ref|NP_985289.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|299789434|gb|AAS53113.2| AER434Cp [Ashbya gossypii ATCC 10895]
gi|374108515|gb|AEY97422.1| FAER434Cp [Ashbya gossypii FDAG1]
Length = 219
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 160/210 (76%), Gaps = 3/210 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ SKSTIGVEFATR+I + K VKAQIWD
Sbjct: 10 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNVNSKSTIGVEFATRTIEVEGKKVKAQIWD 69
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 70 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADENVAVGLIGNKS 129
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A +A+ F ETSAL + NV+ AF E++T IY++VS+ +++ ++
Sbjct: 130 DLAHLRAVPTDEAKNYAQENQMLFTETSALNAENVDLAFRELITAIYQMVSKNQVDLSEN 189
Query: 189 PAA--LPKGQTINVGTKDDVSAVKKV-GCC 215
+ +P+G TI++ + KK CC
Sbjct: 190 NGSGTVPRGPTISLAPAPSEKSKKKTNNCC 219
>gi|94733749|emb|CAK11462.1| novel protein similar to vertebrate RAB25, member RAS oncogene
family (RAB25) [Danio rerio]
Length = 210
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 125/191 (65%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D Y+++FKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TRS++ D +KAQI
Sbjct: 4 DLAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL DH D +IV+MLVGN
Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL +R V TE+A FA+ FMETSALES NVE+AF EVLT I++ V+ K + G
Sbjct: 124 KNDLATVRTVPTEEAKDFADANGLLFMETSALESTNVESAFLEVLTAIHQKVASKEVTRG 183
Query: 187 DDPAALPKGQT 197
+A+ GQT
Sbjct: 184 -SISAVTLGQT 193
>gi|68491615|ref|XP_710395.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68491632|ref|XP_710387.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431579|gb|EAK91125.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46431588|gb|EAK91133.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 222
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 147/179 (82%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL++H D+NI+I LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
DL HLRAV TE+A FA N F E SAL S NV+ +F ++L IY ++S+ LE D
Sbjct: 131 DLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENND 189
>gi|15238392|ref|NP_201330.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
gi|75333961|sp|Q9FJN8.1|RAA4A_ARATH RecName: Full=Ras-related protein RABA4a; Short=AtRABA4a
gi|10178189|dbj|BAB11663.1| GTP-binding protein [Arabidopsis thaliana]
gi|15028289|gb|AAK76621.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|19310619|gb|AAL85040.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|21592616|gb|AAM64565.1| GTP-binding protein [Arabidopsis thaliana]
gi|332010648|gb|AED98031.1| RAB GTPase homolog A4A [Arabidopsis thaliana]
Length = 226
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+R+ R+EFSL+SK+TIGVEF TR++ D K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+TR TF+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
RA+ TEDA FAE+E FF+ETSA + NVE+AF+ VLT+I+ +V++K+L +D
Sbjct: 135 VDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQE 194
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCCSN 217
P +L + V V K CC++
Sbjct: 195 NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|224127991|ref|XP_002320214.1| predicted protein [Populus trichocarpa]
gi|222860987|gb|EEE98529.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 126/213 (59%), Positives = 163/213 (76%), Gaps = 7/213 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ DK++KAQIWDTA
Sbjct: 6 DYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVIIKDKVIKAQIWDTA 65
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVIML+GNKADL
Sbjct: 66 GQERYRAVTSAYYRGALGAMLVYDITKRPTFDHVARWVEELRAHADNSIVIMLIGNKADL 125
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD-DP 189
LRAV TEDA FAE + FF ETSAL NV+ AF +L +IY V+ +K+LE G+ +P
Sbjct: 126 VDLRAVPTEDAVEFAEEQGLFFSETSALSGDNVDGAFFRLLEEIYGVICKKSLECGNGNP 185
Query: 190 AALP----KGQTIN--VGTKDDVSAVKKVGCCS 216
A +G I+ GT ++S +KK+ CS
Sbjct: 186 HAADAITLRGSKIDGISGTDLEISEMKKLSACS 218
>gi|255727853|ref|XP_002548852.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
gi|240133168|gb|EER32724.1| GTP-binding protein YPT32/YPT11 [Candida tropicalis MYA-3404]
Length = 219
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/215 (59%), Positives = 160/215 (74%), Gaps = 5/215 (2%)
Query: 6 ADD---DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
ADD DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K V
Sbjct: 5 ADDYSYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRV 64
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAITSAYYRGAVGAL+VYD+ + ++E+V RWLKEL++H D+NIVI
Sbjct: 65 KAQIWDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIVIE 124
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL HLRAV T++A FA N F E SAL S NV+ +F ++L IY ++S+
Sbjct: 125 LVGNKSDLDHLRAVPTDEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQ 184
Query: 183 LE-IGDDPAALPKGQTINV-GTKDDVSAVKKVGCC 215
LE D G TI++ + ++ CC
Sbjct: 185 LENNADSNKQSTSGPTISLTPAPKEKNSKSNSNCC 219
>gi|297741822|emb|CBI33135.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 118/173 (68%), Positives = 144/173 (83%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFSL+SK+TIGVEF TR++ K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+T+ +F+++ RWL+ELR H D NIVI+L+GNK DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHIPRWLEELRGHADKNIVIILIGNKTDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
RAV TEDA FAE+E FF+ETSALE+ NVENAF VLT+I+ +V++K L
Sbjct: 135 EEQRAVPTEDAKEFAEKEGLFFLETSALEATNVENAFLTVLTEIFNIVNKKNL 187
>gi|296088976|emb|CBI38679.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 161/213 (75%), Gaps = 8/213 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ K++KAQIWDTA
Sbjct: 27 DYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIWDTA 86
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVIMLVGNKADL
Sbjct: 87 GQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNKADL 146
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI----- 185
RAV +EDA F+E + FF ETSAL NVE AF VL +IY VVS+KALE
Sbjct: 147 VDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECDGKSN 206
Query: 186 GDDPAALPKGQTINVGTKDD--VSAVKKVGCCS 216
G D + L KG I+V + D +S VKK+ C+
Sbjct: 207 GCDASNL-KGSKIDVISASDLEISEVKKLSACT 238
>gi|444318297|ref|XP_004179806.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
gi|387512847|emb|CCH60287.1| hypothetical protein TBLA_0C04910 [Tetrapisispora blattae CBS 6284]
Length = 231
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 147/177 (83%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT NEF+LESKSTIGVEFATR+I + K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTNEFNLESKSTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN + WL ELR + D+N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKPSSYENCQHWLTELRGNADANVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
DL H+RAV T++A FA+ F ETSAL+S NV+ AF E++T IY++VS+ +++
Sbjct: 129 DLDHMRAVPTDEAKNFAQENQLLFTETSALQSSNVDQAFRELITAIYQMVSKHQVDM 185
>gi|359489460|ref|XP_002262618.2| PREDICTED: ras-related protein RABA3-like [Vitis vinifera]
Length = 235
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 161/213 (75%), Gaps = 8/213 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF TR++ K++KAQIWDTA
Sbjct: 23 DYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTRTVTIKSKVIKAQIWDTA 82
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVIMLVGNKADL
Sbjct: 83 GQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRAHADTSIVIMLVGNKADL 142
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI----- 185
RAV +EDA F+E + FF ETSAL NVE AF VL +IY VVS+KALE
Sbjct: 143 VDQRAVPSEDAVEFSEDQGLFFSETSALNGDNVETAFFRVLEEIYGVVSKKALECDGKSN 202
Query: 186 GDDPAALPKGQTINVGTKDD--VSAVKKVGCCS 216
G D + L KG I+V + D +S VKK+ C+
Sbjct: 203 GCDASNL-KGSKIDVISASDLEISEVKKLSACT 234
>gi|297794129|ref|XP_002864949.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
gi|297310784|gb|EFH41208.1| hypothetical protein ARALYDRAFT_919858 [Arabidopsis lyrata subsp.
lyrata]
Length = 226
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/212 (57%), Positives = 159/212 (75%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+R+ R+EFSL+SK+TIGVEF TR++ D K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGAVGA+LVYD+TR TF+++ RWL+ELR H D NIVI+L+GNK+DL
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDL 134
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD-- 188
RA+ TEDA FAE+E FF+ETSA + NVE+AF+ VL++I+ +V++K+L +D
Sbjct: 135 VDQRAIPTEDAREFAEKEGLFFLETSAFNATNVESAFSTVLSEIFNIVNKKSLAASEDQE 194
Query: 189 ---PAALPKGQTINVGTKDDVSAVKKVGCCSN 217
P +L + V V K CC++
Sbjct: 195 NGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS 226
>gi|226443180|ref|NP_001140072.1| ras-related protein Rab-25 [Salmo salar]
gi|221221692|gb|ACM09507.1| Ras-related protein Rab-25 [Salmo salar]
Length = 211
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/176 (67%), Positives = 147/176 (83%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+D+ Y+++FKVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR+I+ I+KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTIQLKSLIIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL DH D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADPHIVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
NK DL R+V E+A FAE+ F+ETSALES NVE AF VL +I+R VS K
Sbjct: 123 NKTDLGSERSVPNEEAKDFAEKNGLLFLETSALESTNVETAFQNVLGEIHRKVSSK 178
>gi|410910942|ref|XP_003968949.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 210
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/210 (58%), Positives = 160/210 (76%), Gaps = 5/210 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+D+ Y++++KVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR+++ D +KAQ
Sbjct: 3 SDESYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLDQYTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL +H D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL LR V +E+A AFAE + FMETSAL+S NVE AF EVL+ I + V+ + +
Sbjct: 123 NKRDLDTLRTVPSEEAQAFAENKGIMFMETSALDSTNVEAAFNEVLSAIQKKVASQQVTR 182
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
G A +G D + +K GCC
Sbjct: 183 GSISAVTLSSP---IGATD--TQERKGGCC 207
>gi|149239050|ref|XP_001525401.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450894|gb|EDK45150.1| GTP-binding protein YPT32/YPT11 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 221
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 158/211 (74%), Gaps = 4/211 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DY+YL+K+VLIGDSGVGKSNLLSRFTR+EF+LES+STIGVEFATR++ D K VKAQIWD
Sbjct: 11 DYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWD 70
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGA+GAL+VYD+ + ++E+V RWLKEL++H D+NIVI LVGNK+
Sbjct: 71 TAGQERYRAITSAYYRGALGALIVYDIAKTESYESVSRWLKELKEHADANIVIELVGNKS 130
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA N F E SAL S NV+ +F ++L IY ++S+ L+ +
Sbjct: 131 DLDHLRAVPTDEARNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLDTNEQ 190
Query: 189 PA--ALPKGQTINV--GTKDDVSAVKKVGCC 215
A G TI++ K+ GCC
Sbjct: 191 GGLKAATNGPTISLTPAPKERNRNKNNGGCC 221
>gi|225708476|gb|ACO10084.1| Ras-related protein Rab-25 [Osmerus mordax]
Length = 212
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 162/213 (76%), Gaps = 7/213 (3%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
++++ Y+++FKVVLIG+SGVGKSNLLSRF +NEF+ +S++TIGVEF+TR+++ + +KA
Sbjct: 6 KSNEAYNFVFKVVLIGESGVGKSNLLSRFAKNEFNHDSRTTIGVEFSTRTVQLNGLTIKA 65
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLVYDVT+H+T+E+VERWLKEL DH D ++V+MLV
Sbjct: 66 QIWDTAGLERYRAITSAYYRGAVGALLVYDVTKHLTYESVERWLKELYDHADPHMVVMLV 125
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL R+V TE+A FAE++ F+ETSALES NVE AF +VL++I+R VS K +
Sbjct: 126 GNKSDLVSERSVPTEEAKDFAEKKGLLFLETSALESTNVEAAFNDVLSEIHRKVSSKKVI 185
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G A G + ++ CC N
Sbjct: 186 QGSISAVSLAGHVPSNPEENK-------PCCKN 211
>gi|242032295|ref|XP_002463542.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
gi|241917396|gb|EER90540.1| hypothetical protein SORBIDRAFT_01g001690 [Sorghum bicolor]
Length = 236
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 162/225 (72%), Gaps = 14/225 (6%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+A DDYDYLFKVVL+GDSGVGKSNLLSRFTRN FSL+SKSTIGVEFATR+I+ D K +KA
Sbjct: 12 QAADDYDYLFKVVLVGDSGVGKSNLLSRFTRNTFSLDSKSTIGVEFATRTIQVDGKTIKA 71
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS-NIVIML 123
QIWDTAGQERYRA+TSAYYRGAVGALLVYDVT+ TF N RWL+ELRDH D +ML
Sbjct: 72 QIWDTAGQERYRAVTSAYYRGAVGALLVYDVTKSATFGNAARWLRELRDHADGRGTAVML 131
Query: 124 VGNKADLRH----LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
VGNK DL LRAV D A AERE F+ETSAL++ NV+ AF +LT+IYR V
Sbjct: 132 VGNKTDLAKQRGGLRAVPRGDGAALAEREGLSFVETSALDATNVDAAFVTLLTEIYRAVR 191
Query: 180 RKAL--------EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
RKAL E + AA+ +GQ I V + D + CC+
Sbjct: 192 RKALAAAAADNKEDDEVAAAVGEGQVIQVSSPGDSRGLTTR-CCA 235
>gi|356520251|ref|XP_003528777.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 245
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 164/222 (73%), Gaps = 9/222 (4%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
Y + DY+FKVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ + K++K
Sbjct: 23 YDVQEKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIK 82
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW++ELR H DS+IVIML
Sbjct: 83 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIML 142
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNKADL R V TEDA FAE + FF ETSAL NVE+AF ++L +I RVVS+KAL
Sbjct: 143 VGNKADLVDQRMVPTEDAVEFAEDQGLFFSETSALSGDNVESAFLKLLEEINRVVSKKAL 202
Query: 184 EIG-------DDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
E G ++ A G +++ G + ++S +KK+ CS
Sbjct: 203 ECGYGKENGDNNVVASLNGTKVDIILGPELEISEMKKLSSCS 244
>gi|15238115|ref|NP_199563.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
gi|75333810|sp|Q9FGK5.1|RAA5A_ARATH RecName: Full=Ras-related protein RABA5a; Short=AtRABA5a
gi|9758780|dbj|BAB09078.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|28466933|gb|AAO44075.1| At5g47520 [Arabidopsis thaliana]
gi|62321645|dbj|BAD95258.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|110743839|dbj|BAE99754.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|332008145|gb|AED95528.1| RAB GTPase homolog A5A [Arabidopsis thaliana]
Length = 221
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 159/222 (71%), Gaps = 6/222 (2%)
Query: 1 MGAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD 59
M Y DD DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
V +LVGNK+DL+ LR VST + A AE + FFMETSAL+S NV AF V+ +IY ++S
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALEIGD----DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
RK + + DPA+L G+ + + + D KK GCCS+
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVIPS-DGQGEFKKGGCCSS 221
>gi|168056370|ref|XP_001780193.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162668343|gb|EDQ54952.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 161/218 (73%), Gaps = 9/218 (4%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY D DYLFKVVLIGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ D K +
Sbjct: 2 AYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIDGKEI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+NV RWL ELR H+D+++V+M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRKGTFDNVGRWLDELRVHSDASVVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK DL ++R VS E+AT A+ E F+ETSA+++ NV NAF V+ +IYRVVS+K
Sbjct: 122 LVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKP 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAV----KKVGCCS 216
L + K T+ +G+ ++ + K CCS
Sbjct: 182 LT----SSVSMKSNTV-LGSSQRLAGIDDIQPKRNCCS 214
>gi|297790909|ref|XP_002863339.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
gi|297309174|gb|EFH39598.1| hypothetical protein ARALYDRAFT_494220 [Arabidopsis lyrata subsp.
lyrata]
Length = 221
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/222 (56%), Positives = 159/222 (71%), Gaps = 6/222 (2%)
Query: 1 MGAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD 59
M Y DD DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
V +LVGNK+DL+ LR VST + A AE + FFMETSAL+S NV AF V+ +IY ++S
Sbjct: 121 VTILVGNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALEIGD----DPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
RK + + DPA+L G+ + + + D KK GCCS+
Sbjct: 181 RKVMSSQELNKQDPASLSNGKKVVIPS-DGQGESKKGGCCSS 221
>gi|89257484|gb|ABD64975.1| Ras family GTP-binding protein [Brassica oleracea]
Length = 221
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/220 (55%), Positives = 162/220 (73%), Gaps = 7/220 (3%)
Query: 3 AYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
A+ ++DD DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K
Sbjct: 2 AFHSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRQQTFQSIGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+LVGNK+DL+ +R V T + A AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILVGNKSDLKGIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSR 181
Query: 181 KALEIGD----DPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K + + DPA+L G+ + + +++ + KK GCCS
Sbjct: 182 KVMSSQELNKQDPASLSNGKKVVIPSEEQGES-KKGGCCS 220
>gi|168001170|ref|XP_001753288.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162695574|gb|EDQ81917.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 216
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 160/218 (73%), Gaps = 9/218 (4%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
AY D DYLFKVVLIGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ K +
Sbjct: 2 AYNDDKSEDYLFKVVLIGDSAVGKSNLLSRYARNEFNLNSKATIGVEFQTQSMEIGGKEI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TFENV RWL ELR H+D+++V+M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRGTFENVGRWLDELRVHSDASVVVM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK DL ++R VS E+AT A+ E F+ETSA+++ NV NAF V+ +IYRVVS+K
Sbjct: 122 LVGNKCDLDNIREVSQEEATLLAQNEKMSFIETSAMDATNVTNAFQSVVKEIYRVVSKKP 181
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAV----KKVGCCS 216
L + K T+ +G+ ++ + K CCS
Sbjct: 182 LA----SSTSMKSNTV-LGSSQRLAGIDDTQPKKNCCS 214
>gi|255585255|ref|XP_002533328.1| protein with unknown function [Ricinus communis]
gi|223526833|gb|EEF29049.1| protein with unknown function [Ricinus communis]
Length = 231
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/213 (58%), Positives = 160/213 (75%), Gaps = 7/213 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVV+IGDS VGK+ LLSRFT+NEF +SKSTIGVEF TR++ K+VKAQIWDTA
Sbjct: 18 DYVFKVVVIGDSAVGKTQLLSRFTKNEFCFDSKSTIGVEFQTRTVTIKGKVVKAQIWDTA 77
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVI L+GNKADL
Sbjct: 78 GQERYRAVTSAYYRGALGAMLVYDITKRATFDHVARWVEELRAHADNSIVITLIGNKADL 137
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
RAV TEDA FAE + FF ETSAL NV+ AF +L +IY V+S+K+LE G
Sbjct: 138 VDQRAVPTEDAVEFAEDQGLFFSETSALSGDNVDRAFFRLLEEIYGVISKKSLECGGHKT 197
Query: 190 ----AALPKGQTINV--GTKDDVSAVKKVGCCS 216
+ + +G I+V G+ ++S +KK+ CS
Sbjct: 198 NGADSVMLRGSKIDVISGSDLEISEMKKLSACS 230
>gi|401626081|gb|EJS44046.1| ypt31p [Saccharomyces arboricola H-6]
Length = 223
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 145/182 (79%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYD LFK+VLIGDSGVGKSNLLSRFT+NEF+++SKSTIGVEFATR++ D K +KAQIWD
Sbjct: 9 DYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV TE++ FA F ETSAL S NV+ AF E++ IY+ VS+ +++GD
Sbjct: 129 DLAHLRAVPTEESKTFALENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDS 188
Query: 189 PA 190
A
Sbjct: 189 AA 190
>gi|6321228|ref|NP_011305.1| Ypt32p [Saccharomyces cerevisiae S288c]
gi|1730881|sp|P51996.3|YPT32_YEAST RecName: Full=GTP-binding protein YPT32/YPT11; AltName: Full=Rab
GTPase YPT32
gi|927543|emb|CAA51355.1| Ypt32p [Saccharomyces cerevisiae]
gi|1322850|emb|CAA96926.1| YPT32 [Saccharomyces cerevisiae]
gi|1655723|gb|AAC49495.1| ras-like GTPase [Saccharomyces cerevisiae]
gi|45270902|gb|AAS56832.1| YGL210W [Saccharomyces cerevisiae]
gi|151943607|gb|EDN61917.1| GTPase [Saccharomyces cerevisiae YJM789]
gi|190407147|gb|EDV10414.1| GTP-binding protein YPT32/YPT11 [Saccharomyces cerevisiae RM11-1a]
gi|256269382|gb|EEU04680.1| Ypt32p [Saccharomyces cerevisiae JAY291]
gi|285812006|tpg|DAA07906.1| TPA: Ypt32p [Saccharomyces cerevisiae S288c]
gi|323305067|gb|EGA58820.1| Ypt32p [Saccharomyces cerevisiae FostersB]
gi|323333611|gb|EGA75004.1| Ypt32p [Saccharomyces cerevisiae AWRI796]
gi|323337752|gb|EGA78996.1| Ypt32p [Saccharomyces cerevisiae Vin13]
gi|323355135|gb|EGA86964.1| Ypt32p [Saccharomyces cerevisiae VL3]
gi|349578025|dbj|GAA23191.1| K7_Ypt32p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765748|gb|EHN07254.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299532|gb|EIW10626.1| Ypt32p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 222
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 157/215 (73%), Gaps = 9/215 (4%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I ++K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA F ETSAL S NV+ AF E++ I+++VS+ +++
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 189 PA------ALPKGQTINV--GTKDDVSAVKKVGCC 215
PKG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKED-KKKKSSNCC 222
>gi|358333720|dbj|GAA52200.1| Ras-related protein Rab-11B, partial [Clonorchis sinensis]
Length = 546
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/155 (74%), Positives = 135/155 (87%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYR 76
VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRS++ K +KAQIWDTAGQERYR
Sbjct: 1 VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQFGGKTIKAQIWDTAGQERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 136
AITSAYYRGAVGALLVYD+++H T+ENV +WL ELRDH+D +IV+ML+GNK DLRHLR V
Sbjct: 61 AITSAYYRGAVGALLVYDISKHSTYENVTQWLHELRDHSDQDIVVMLIGNKCDLRHLRMV 120
Query: 137 STEDATAFAERENTFFMETSALESMNVENAFTEVL 171
T++A FA RE FF ETSAL++ NV+ AF +VL
Sbjct: 121 PTDEAREFAMREKLFFTETSALDATNVDEAFVQVL 155
>gi|56758178|gb|AAW27229.1| SJCHGC05511 protein [Schistosoma japonicum]
gi|226466852|emb|CAX69561.1| Ras-related protein Rab-11A [Schistosoma japonicum]
Length = 213
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 153/210 (72%), Gaps = 1/210 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D LFK+VLIGDSGVGK+NL SRFT EF+LESKSTIGV+FAT+++ D K+VKAQI
Sbjct: 5 DPQLGLLFKIVLIGDSGVGKTNLRSRFTNQEFNLESKSTIGVDFATKNVVIDGKVVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+++ TF N++RWL ELR++ ++VIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDISKPDTFLNLDRWLDELREYASDDVVIMLVGN 124
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL+HLR V TEDA FAE++ FMETSAL + NVE AF + L IY VVS++
Sbjct: 125 KCDLKHLRCVLTEDAKLFAEQQGMSFMETSALNAFNVEEAFCQTLKTIYNVVSKRPSFNA 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
D+ +P + V + KK CC+
Sbjct: 185 DEGNIIPTNN-LPVEEPNLKETTKKKFCCT 213
>gi|221505687|gb|EEE31332.1| Rab 11 protein, putative [Toxoplasma gondii VEG]
Length = 193
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/192 (63%), Positives = 153/192 (79%), Gaps = 4/192 (2%)
Query: 29 LLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKAQIWDTAGQERYRAITSAYYRGAV 87
+LSRFTR+EF+LESKSTIGVEFAT+S+ D+ K++KAQIWDTAGQERYRAITSAYYRGAV
Sbjct: 1 MLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAGQERYRAITSAYYRGAV 60
Query: 88 GALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAER 147
GALLVYD+T+ +FENVERWLKELRDH D NIVI+LVGNK+DL+HLRAVS E+AT FA R
Sbjct: 61 GALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKSDLKHLRAVSVEEATKFANR 120
Query: 148 ENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALP-KGQTINVGTKDDV 206
E+ F+ETSAL++ NVE AF ++L +IY + +K +E P +GQ I++ +
Sbjct: 121 EHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQSTTQPGRGQKIHLDEERTD 180
Query: 207 SAVKKV--GCCS 216
S +++ GCCS
Sbjct: 181 SQIRQSRRGCCS 192
>gi|358248878|ref|NP_001239700.1| uncharacterized protein LOC100787725 [Glycine max]
gi|255639774|gb|ACU20180.1| unknown [Glycine max]
Length = 236
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 162/217 (74%), Gaps = 8/217 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D DY+FKVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ + K++KAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKSTIGVEFQTRTVTINGKVIKAQIW 78
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+++ +F++V RW+ ELR H DS+IVIML+GNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDISKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG- 186
DL R V EDA FAE + FF ETSAL NVE+AF ++L +I+RV+S+++LE G
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESAFFKLLEEIHRVISKRSLECGN 198
Query: 187 -----DDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
D+ A KG I+V G + +++ +KK+ CS
Sbjct: 199 GKANADNNLATLKGSKIDVISGAELEITDMKKLSSCS 235
>gi|405952895|gb|EKC20651.1| Ras-related protein Rab-11A [Crassostrea gigas]
Length = 234
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 152/188 (80%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
++D+YDYL KVVL GDSGVGK+NLLSRFTRNEFSLES+STIGVEFATRS+ D K +KAQ
Sbjct: 24 SEDEYDYLAKVVLTGDSGVGKTNLLSRFTRNEFSLESRSTIGVEFATRSVHIDGKTLKAQ 83
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQ+RYRAIT+AYYR AVG + VYD+ + TF+N+++WLKE R+ TD ++++MLVG
Sbjct: 84 IWDTAGQDRYRAITNAYYRKAVGVIFVYDIAKRPTFDNLDKWLKEARNFTDDDVILMLVG 143
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DLRHLRAVS+++A ++AE+ N ++ETSAL+ +V+ AF +L +IY +S+K L+
Sbjct: 144 NKTDLRHLRAVSSQEARSYAEKNNMSYIETSALDCTHVDLAFQSILKEIYSTISQKGLKD 203
Query: 186 GDDPAALP 193
LP
Sbjct: 204 DTGGFNLP 211
>gi|401625852|gb|EJS43840.1| ypt32p [Saccharomyces arboricola H-6]
Length = 222
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 158/215 (73%), Gaps = 9/215 (4%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I ++K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA F ETSAL S NV+ AF E++ I+++VS+ +++
Sbjct: 129 DLAHLRAVPTDEARNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDLNGS 188
Query: 189 PA------ALPKGQTINV--GTKDDVSAVKKVGCC 215
+ PKG TI++ K+D K CC
Sbjct: 189 GSNNVGSNGGPKGPTISLTPAPKED-KKKKSSNCC 222
>gi|356573249|ref|XP_003554775.1| PREDICTED: ras-related protein RABA3-like [Glycine max]
Length = 236
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 160/217 (73%), Gaps = 8/217 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D DY+FKVV+IGDS VGK+ +LSRF +NEF SKSTIGVEF TRS+ + K++KAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIW 78
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW+ ELR H DS+IVIML+GNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI-- 185
DL R V EDA FAE + FF ETSAL NVE++F ++L +I+RV+S+++LE
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDN 198
Query: 186 ----GDDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
D+ A KG I+V G + +++ +KK+ CS
Sbjct: 199 GKANADNNVATLKGSKIDVISGAELEIAEMKKLSSCS 235
>gi|432910564|ref|XP_004078416.1| PREDICTED: ras-related protein Rab-25-like [Oryzias latipes]
Length = 208
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 160/212 (75%), Gaps = 7/212 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+D+ Y+++FKVVLIG+SGVGKSNLLSRFT+NEFS +S++TIGVEF+TR+++ + +KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNSFTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T+E+VERWLKEL DH D ++V+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELLDHADQHMVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL R+V +E+A FA++ F+ETSALES NVE AF VL +I+R VS + +
Sbjct: 123 NKTDLESERSVPSEEAKDFADKNGLMFLETSALESTNVEAAFNGVLAEIHRKVSSREVLR 182
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G A +++ + S + CC N
Sbjct: 183 GPISA-------VSLNSSGAESTEENKPCCRN 207
>gi|365760833|gb|EHN02521.1| Ypt32p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 222
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 156/214 (72%), Gaps = 7/214 (3%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I ++K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI--- 185
DL HLRAV T++A FA F ETSAL S NV+ AF E++ I+++VS+ +++
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDRAFRELIVAIFQMVSKHQVDLNGS 188
Query: 186 ---GDDPAALPKGQTINVGTKDDVSAVKK-VGCC 215
PKG TI++ + KK CC
Sbjct: 189 GTNNGGSNGGPKGPTISLTPAPNEGKKKKSSNCC 222
>gi|356520643|ref|XP_003528970.1| PREDICTED: ras-related protein RABA6b-like [Glycine max]
Length = 218
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 163/213 (76%), Gaps = 5/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+ DK++KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD+T+ TF NV +WL ELR+ ++V++LVGN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL R V E+ FAE E FMETSAL+++NV+ AF E++T+I+ ++S+K+LE
Sbjct: 128 KSDLDQSRQVEREEGKVFAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187
Query: 187 DDPAA--LPKGQTINVGTKDDVSAVKKVG-CCS 216
+ A LP G+ I++ D+V+A K+ CCS
Sbjct: 188 MNGTALNLPSGKEIHIA--DEVTATKQAKYCCS 218
>gi|259146304|emb|CAY79561.1| Ypt32p [Saccharomyces cerevisiae EC1118]
Length = 222
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 157/215 (73%), Gaps = 9/215 (4%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I ++K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA F +TSAL S NV+ AF E++ I+++VS+ +++
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTDTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 189 PA------ALPKGQTINV--GTKDDVSAVKKVGCC 215
PKG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKED-KKKKSSNCC 222
>gi|2623643|gb|AAB86480.1| GTP-binding protein [Entamoeba histolytica]
Length = 206
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/210 (56%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DYD+L+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ + K+++AQI
Sbjct: 2 EEDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQI 61
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ERWL EL+D+ D IVIM++GN
Sbjct: 62 WDTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGN 121
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
KADL R V A F +++N FF ETSAL+ NVE AF +L +I++ + E
Sbjct: 122 KADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEESS 181
Query: 187 DD-PAALPKGQTINVGTKDDVSAVKKVGCC 215
+D PA P I K++ K GCC
Sbjct: 182 NDKPAEKPDVVPIEPSPKEN-----KGGCC 206
>gi|302776382|ref|XP_002971361.1| rab family GTPase [Selaginella moellendorffii]
gi|300161343|gb|EFJ27959.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 164/220 (74%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG +D D DYLFK+VLIGDS VGKSNLLSR++RNEF L S++TIGVEF T+S+ + K
Sbjct: 1 MGHGGSDGD-DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQIWDTAGQER+RA+TSAYYRGAVGA++VYD+++ TFENVERWL+ELR ++D ++V
Sbjct: 60 EVKAQIWDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
MLVGNK+DL LR VS E+AT AERE FF+ETSAL+S NV AF V+ +I+ +VS+
Sbjct: 120 TMLVGNKSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSK 179
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKK---VGCCSN 217
K L A G T +G ++ S+ + + CCS+
Sbjct: 180 KILSSDSSKAGTLSG-TKKLGLENGNSSKPQDSGLSCCSS 218
>gi|67462573|ref|XP_647948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978618|dbj|BAD34976.1| EhRab11A protein [Entamoeba histolytica]
gi|56463710|gb|EAL42562.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449707698|gb|EMD47312.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 153/209 (73%), Gaps = 6/209 (2%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DYD+L+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ + K+++AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ERWL EL+D+ D IVIM++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
ADL R V A F +++N FF ETSAL+ NVE AF +L +I++ + E +
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEESSN 183
Query: 188 D-PAALPKGQTINVGTKDDVSAVKKVGCC 215
D PA P I K++ K GCC
Sbjct: 184 DKPAEKPDVVPIEPSPKEN-----KGGCC 207
>gi|291233885|ref|XP_002736881.1| PREDICTED: Ras-related protein Rab-11A-like, partial [Saccoglossus
kowalevskii]
Length = 145
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/142 (81%), Positives = 129/142 (90%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAG 71
+ F VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAG
Sbjct: 1 FFFVVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG 60
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
QERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIMLVGNK+DLR
Sbjct: 61 QERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLR 120
Query: 132 HLRAVSTEDATAFAERENTFFM 153
HLRAV T++A AFA R N+F
Sbjct: 121 HLRAVPTDEAKAFAGRTNSFLF 142
>gi|167376392|ref|XP_001733978.1| rab11 [Entamoeba dispar SAW760]
gi|165904707|gb|EDR29887.1| rab11, putative [Entamoeba dispar SAW760]
Length = 231
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 152/209 (72%), Gaps = 6/209 (2%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DYD+L+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ + K+++AQIW
Sbjct: 28 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 87
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ERWL EL+D+ D IVIM++GNK
Sbjct: 88 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 147
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
ADL R + A F +++N FF ETSAL+ NVE AF +L +I++ + E +
Sbjct: 148 ADLAQTREIEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASTVEETSN 207
Query: 188 D-PAALPKGQTINVGTKDDVSAVKKVGCC 215
D PA P I K+ K GCC
Sbjct: 208 DKPAEKPDVVAIEPSPKES-----KGGCC 231
>gi|303736|dbj|BAA02109.1| GTP-binding protein [Pisum sativum]
gi|738934|prf||2001457B GTP-binding protein
Length = 222
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 163/221 (73%), Gaps = 9/221 (4%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+ + DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF T+++ + K++KA
Sbjct: 1 KLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLIKA 60
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D +IVIML+
Sbjct: 61 QIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIMLI 120
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK DL R V TEDA FAE + FF ETSA NV +AF ++L +I +VVS+++LE
Sbjct: 121 GNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRSLE 180
Query: 185 I-------GDDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
G+ A KG+ I++ G++ ++S +KK+ CS
Sbjct: 181 CNNGIKGNGNHDVAALKGEKIDIISGSELEISEIKKLHSCS 221
>gi|323348755|gb|EGA82996.1| Ypt32p [Saccharomyces cerevisiae Lalvin QA23]
Length = 222
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/215 (56%), Positives = 156/215 (72%), Gaps = 9/215 (4%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I ++K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLRAV T++A FA F TSAL S NV+ AF E++ I+++VS+ +++
Sbjct: 129 DLAHLRAVPTDEAKNFAMENQMLFTXTSALNSDNVDKAFRELIVAIFQMVSKHQVDLSGS 188
Query: 189 PA------ALPKGQTINV--GTKDDVSAVKKVGCC 215
PKG TI++ K+D K CC
Sbjct: 189 GTNNMGSNGAPKGPTISLTPAPKED-KKKKSSNCC 222
>gi|62988286|ref|NP_001017936.1| ras-related protein Rab-25 [Bos taurus]
gi|75069882|sp|Q58DW6.1|RAB25_BOVIN RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|61552966|gb|AAX46328.1| RAB25 [Bos taurus]
gi|296489661|tpg|DAA31774.1| TPA: ras-related protein Rab-25 [Bos taurus]
Length = 213
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 158/219 (72%), Gaps = 20/219 (9%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
RA++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--- 181
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 182 -----ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
A+ +G PA GQ + G +K CC
Sbjct: 184 NARTNAVTLGSGPA----GQELGPG--------EKRACC 210
>gi|255644772|gb|ACU22888.1| unknown [Glycine max]
Length = 236
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 159/217 (73%), Gaps = 8/217 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D DY+FKVV+IGDS VGK+ +LSRF +NEF SKSTIGVEF TRS+ + K++KAQIW
Sbjct: 19 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFNSKSTIGVEFQTRSVTINGKVIKAQIW 78
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW+ ELR H DS+IVIML+GNK
Sbjct: 79 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVDELRAHADSSIVIMLIGNK 138
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI-- 185
DL R V EDA FAE + FF ETSAL NVE++F ++L +I+RV+S+++LE
Sbjct: 139 GDLVDQRVVHAEDAVEFAEDQGLFFSETSALSGENVESSFFKLLEEIHRVISKRSLECDN 198
Query: 186 ----GDDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
D+ A KG I+V G + +++ +KK CS
Sbjct: 199 GKANADNNVATLKGSKIDVISGAELEIAEMKKSSSCS 235
>gi|302142882|emb|CBI20177.3| unnamed protein product [Vitis vinifera]
Length = 171
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 152/219 (69%), Gaps = 52/219 (23%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKV SKSTIGVEFATR++ D K
Sbjct: 1 MAGYRAEDDYDYLFKV-------------------------SKSTIGVEFATRTLNVDGK 35
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENV+RWLKELR+HTD NIV
Sbjct: 36 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIV 95
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+AERE+ +FMETSALE+ NVENAF EVLTQIYR+VS+
Sbjct: 96 ----------------------TYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSK 133
Query: 181 KALEIGDDPAA--LP-KGQTINVGTKDDVSAVKKVGCCS 216
K++E GD+ AA +P KG+ INV KDD SA+K+VGCCS
Sbjct: 134 KSVEGGDEGAASSVPAKGERINV--KDDASALKRVGCCS 170
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 158/212 (74%), Gaps = 8/212 (3%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
+FK+V++GDSGVGKS LL+RF +NEF ++SK TIGVEF TR++ D K+VKAQIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
ERY+AIT+AYYRGA ALL YD+T+ TF++VE+WL ELR HTD NI++MLVGNK+DL
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKNILVMLVGNKSDLSS 120
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAAL 192
LRAV TE A FA++E FF+ETSAL+S NVE+AF +L+Q+YR VSRK + + +
Sbjct: 121 LRAVPTEVARDFAQQEGLFFLETSALDSSNVESAFIGLLSQVYRTVSRKLILVDGHESNW 180
Query: 193 PK------GQTINVGTKDD--VSAVKKVGCCS 216
K G I V +++ +A K+ CCS
Sbjct: 181 DKVNLELEGTKIKVPSQEPECQNAKKRFNCCS 212
>gi|302756057|ref|XP_002961452.1| rab family GTPase [Selaginella moellendorffii]
gi|300170111|gb|EFJ36712.1| rab family GTPase [Selaginella moellendorffii]
Length = 218
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 164/220 (74%), Gaps = 5/220 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG +D D DYLFK+VLIGDS VGKSNLLSR++RNEF L S++TIGVEF T+S+ + K
Sbjct: 1 MGHGGSDGD-DYLFKIVLIGDSAVGKSNLLSRYSRNEFHLNSRATIGVEFQTQSMVIEGK 59
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQIWDTAGQER+RA+TSAYYRGAVGA++VYD+++ TFENVERWL+ELR ++D ++V
Sbjct: 60 EVKAQIWDTAGQERFRAVTSAYYRGAVGAMIVYDISQKQTFENVERWLEELRVYSDFSLV 119
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
MLVGNK+DL LR VS E+AT AERE FF+ETSAL+S NV AF V+ +I+ +VS+
Sbjct: 120 TMLVGNKSDLESLRQVSIEEATDLAEREGLFFIETSALDSTNVAAAFETVIKEIFGMVSK 179
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKK---VGCCSN 217
K L D A T +G ++ S+ + + CCS+
Sbjct: 180 KILS-SDSSKARTLSGTKKLGLENGNSSKPQDSGLSCCSS 218
>gi|255583461|ref|XP_002532489.1| protein with unknown function [Ricinus communis]
gi|223527788|gb|EEF29888.1| protein with unknown function [Ricinus communis]
Length = 222
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 152/200 (76%), Gaps = 8/200 (4%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGVEFA R+IR DK++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVEFAYRNIRVADKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TF+NV++WL ELR++ + +V++L GN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRRATFDNVKKWLTELREYGNPEMVVVLAGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE-- 184
K DL H R V E+ AE E FMETSALE++NVE AF E++T+I+ + S+K+LE
Sbjct: 126 KCDLSHTREVGEEEGKNLAETEGLCFMETSALENLNVEEAFLEMITKIHAITSQKSLEVR 185
Query: 185 ------IGDDPAALPKGQTI 198
I ALP G+ +
Sbjct: 186 LKDANNITSKTVALPVGKEV 205
>gi|5926718|dbj|BAA84640.1| PRA2 [Pisum sativum]
Length = 233
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/223 (53%), Positives = 163/223 (73%), Gaps = 9/223 (4%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A + + DY+FKVV+IGDS VGK+ +LSRFT+NEF +SKSTIGVEF T+++ + K++
Sbjct: 10 AEKLQEKIDYVFKVVVIGDSAVGKTQILSRFTKNEFCFDSKSTIGVEFQTKTVTINGKLI 69
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D +IVIM
Sbjct: 70 KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWVEELRSHADGSIVIM 129
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL R V TEDA FAE + FF ETSA NV +AF ++L +I +VVS+++
Sbjct: 130 LIGNKGDLVDQRGVQTEDAVEFAEDQGLFFSETSAFSGENVNSAFLKLLQEINKVVSKRS 189
Query: 183 LEI-------GDDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
LE G+ A KG+ I++ ++ ++S +KK+ CS
Sbjct: 190 LECNNGIKGNGNHDVAALKGEKIDIISASELEISEIKKLHSCS 232
>gi|111305025|gb|AAI20092.1| RAB25, member RAS oncogene family [Bos taurus]
Length = 213
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 158/219 (72%), Gaps = 20/219 (9%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
RA++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--- 181
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 182 -----ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
A+ +G PA GQ + G +K CC
Sbjct: 184 NARTNAVILGSGPA----GQELGPG--------EKRACC 210
>gi|117939087|dbj|BAF36697.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 198
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/165 (70%), Positives = 140/165 (84%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
+VLIGDSGVGKSNLL R+T+ EF+LESKSTIGVEFAT++I+ D+K +KAQIWDTAGQ+RY
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKIEFNLESKSTIGVEFATKTIQYDNKNIKAQIWDTAGQDRY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RA+TSAYYRGAVGALLVYDV++H T+E V++WLKELRD D IVIMLVGNK+DLRHLR
Sbjct: 61 RAVTSAYYRGAVGALLVYDVSKHSTYEGVDKWLKELRDQADPAIVIMLVGNKSDLRHLRN 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
V TE+A +FA+R N F+ETSA S NVE AF +L +IY+ V R
Sbjct: 121 VPTEEAKSFAQRNNLSFIETSAQSSTNVEAAFNTILQEIYKNVVR 165
>gi|242079903|ref|XP_002444720.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
gi|241941070|gb|EES14215.1| hypothetical protein SORBIDRAFT_07g026600 [Sorghum bicolor]
Length = 216
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFKVV+IGDS VGKSNLLSR+ RNEFSL SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFSLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ + MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R V E+ A AE E FFMETSAL++ NV AF V+ +IY VSRK L A
Sbjct: 131 DNIREVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSSVSRKILNSDSYKA 190
Query: 191 ALPKGQ-TINVGTKDDVSAVKKVGCC 215
L + +I+ +KDD + GCC
Sbjct: 191 ELSLNRVSIDGDSKDDKKQTSRFGCC 216
>gi|407043687|gb|EKE42089.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 152/209 (72%), Gaps = 6/209 (2%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DYD+L+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ + K+++AQIW
Sbjct: 4 EDYDFLYKIVLIGESGVGKSNLLLRFTRNEFDAEKRSTIGVEFATRSIQHEGKVIRAQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGAVGAL+VYD+T+ TF+++ERWL EL+D+ D IVIM++GNK
Sbjct: 64 DTAGQERYRAITNAYYRGAVGALVVYDITKENTFKSIERWLSELKDNADPKIVIMIIGNK 123
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
ADL R V A F +++N FF ETSAL+ NVE AF +L +I++ + E +
Sbjct: 124 ADLAQTREVEEATAKEFCQKQNLFFFETSALDGTNVETAFKSLLVEIFKQNASAVEESSN 183
Query: 188 D-PAALPKGQTINVGTKDDVSAVKKVGCC 215
D P P I K++ K GCC
Sbjct: 184 DKPTEKPDVVPIEPSPKEN-----KGGCC 207
>gi|302309967|ref|XP_451560.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199424819|emb|CAH01953.2| KLLA0B00671p [Kluyveromyces lactis]
Length = 219
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 155/211 (73%), Gaps = 4/211 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYD+LFK+VLIGDSGVGKSNLLSRFT NEF+L+SK+TIGVEFATR+I + K +KAQIWD
Sbjct: 9 DYDFLFKIVLIGDSGVGKSNLLSRFTANEFNLDSKTTIGVEFATRTIEVEGKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAIT+AYYR AVGAL+VYD+T+ ++EN WL EL+ + D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITTAYYRAAVGALIVYDITKSSSYENCNHWLAELKQNADENVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD- 187
DL H RAV T++A +A+ F ETSAL + NV+ AF ++T IY+++S+ L++ D
Sbjct: 129 DLDHKRAVPTDEARNYAQENQLLFTETSALNADNVDEAFRALITAIYQMISKNQLDLNDA 188
Query: 188 --DPAALPKGQTINVGTKDDVSAVKKV-GCC 215
+ A PKG TI++ + K CC
Sbjct: 189 SGNNANAPKGPTISLTPAPNEKHKKSTNNCC 219
>gi|89257444|gb|ABD64936.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 219
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 158/219 (72%), Gaps = 7/219 (3%)
Query: 3 AYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
A+ ++DD DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I + K
Sbjct: 2 AFHSEDDRSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDINGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF ++ RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRKQTFHSIGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+LVGNK+DL+ +R V T + A AE + FFMETSA +S NV AF V+ +IY ++SR
Sbjct: 122 TILVGNKSDLKDIREVPTAEGKALAEAQGLFFMETSARDSSNVAAAFETVVKEIYNILSR 181
Query: 181 KALEIGD----DPAALPKGQTINVGTKDDVSAVKKVGCC 215
K + + DPA+L G+ + + ++ A KK GCC
Sbjct: 182 KVMSSQELNKQDPASLSNGKKVVIPSEAQGEA-KKGGCC 219
>gi|255646177|gb|ACU23574.1| unknown [Glycine max]
Length = 218
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 162/213 (76%), Gaps = 5/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+ DK++KAQI
Sbjct: 8 DEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD+T+ TF NV +WL ELR+ ++V++LVGN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVGN 127
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL R V E+ AE E FMETSAL+++NV+ AF E++T+I+ ++S+K+LE
Sbjct: 128 KSDLDQSRQVEREEGKVVAETEELCFMETSALQNLNVDEAFLEMITKIHDIISQKSLETK 187
Query: 187 DDPAA--LPKGQTINVGTKDDVSAVKKVG-CCS 216
+ A LP G+ I++ D+V+A K+ CCS
Sbjct: 188 MNGTALNLPSGKEIHIA--DEVTATKQAKYCCS 218
>gi|426216816|ref|XP_004002653.1| PREDICTED: ras-related protein Rab-25 [Ovis aries]
Length = 213
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 124/219 (56%), Positives = 157/219 (71%), Gaps = 20/219 (9%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
RA++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--- 181
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQSREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLREIFAKVSKQRQN 183
Query: 182 -----ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
A+ +G P GQ + G +K CC
Sbjct: 184 NARTNAITLGSGPT----GQELGPG--------EKRACC 210
>gi|31980838|ref|NP_058595.2| ras-related protein Rab-25 [Mus musculus]
gi|46397889|sp|Q9WTL2.2|RAB25_MOUSE RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|12833818|dbj|BAB22676.1| unnamed protein product [Mus musculus]
gi|13879300|gb|AAH06624.1| RAB25, member RAS oncogene family [Mus musculus]
gi|112293009|dbj|BAF02882.1| Rab25 [Mus musculus]
gi|148683327|gb|EDL15274.1| RAB25, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 213
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 154/211 (72%), Gaps = 4/211 (1%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R D+DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKA
Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQK-Q 182
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+A+ G N D +K CC
Sbjct: 183 NSTRTSAITLG---NAQAGQDPGPGEKRACC 210
>gi|307107707|gb|EFN55949.1| hypothetical protein CHLNCDRAFT_48772 [Chlorella variabilis]
Length = 222
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/217 (54%), Positives = 154/217 (70%), Gaps = 4/217 (1%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R+DDDYD L KVVLIGDSGVGK+N LSRF R EF SK TIGVEFAT+++ + ++K
Sbjct: 6 RSDDDYDMLLKVVLIGDSGVGKTNCLSRFCRGEFQASSKPTIGVEFATKALTIEGDLIKC 65
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAIT+AYYRGAVGALLVYDVTR +FE++ RWL ELR+H S++V+MLV
Sbjct: 66 QIWDTAGQERYRAITNAYYRGAVGALLVYDVTRASSFESIPRWLNELREHASSDMVVMLV 125
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK DL R VS + A+RE F+ETSAL+ NVE AF+ V +I+ +V ++ LE
Sbjct: 126 GNKTDLVDQRDVSMQQGQELAQREGLLFIETSALDGSNVEQAFSRVAAEIHGIVRKRRLE 185
Query: 185 IG----DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
++ A +P+G +I + + ++ CCS+
Sbjct: 186 SQAAEDEELAPMPRGISIPIAVQPTQPQQQQSRCCSS 222
>gi|294463635|gb|ADE77345.1| unknown [Picea sitchensis]
Length = 223
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 155/211 (73%), Gaps = 5/211 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLL+R+ RNEF SKSTIGVEF T++++ D K +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARYARNEFYPNSKSTIGVEFQTQTMQIDGKEIKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF+N+ RWL EL H+D N+V ++VGNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALVVYDISRRQTFDNISRWLDELHTHSDMNVVTVIVGNKTDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
R VSTE+ A AE +N +F+ETSAL+S NV+ AF V+ +IY ++SRK L +
Sbjct: 132 LDAREVSTEEGAALAEAQNIYFVETSALDSTNVQLAFQTVVKEIYNILSRKVLSCQEQKL 191
Query: 190 -AALPKGQTINVGTKDDVSAVKKVG---CCS 216
+ + G+T+ + + S K+ G CCS
Sbjct: 192 ESKISNGKTVVLQEAESESTAKQTGKLWCCS 222
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 143/166 (86%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R ++DYDYLFK+V+IGDSGVGK+N+LSRFT++EFS+ESK TIGVEFAT+++ D+K++KA
Sbjct: 3 RPEEDYDYLFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQE+YRAIT+AYYRGAVGAL ++D+T+ TF+N+++WL EL+++ D NIVIMLV
Sbjct: 63 QIWDTAGQEKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPNIVIMLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEV 170
GNK DL RAV TEDA+AFAER ++ETSAL+S NV+ AF V
Sbjct: 123 GNKCDLNENRAVKTEDASAFAERNQLAYIETSALDSTNVDEAFQRV 168
>gi|5106984|gb|AAD39911.1|AF119675_1 small GTP-binding protein RAB25 [Mus musculus]
gi|5106986|gb|AAD39912.1|AF119676_1 small GTP-binding protein RAB25 [Mus musculus]
Length = 213
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/211 (58%), Positives = 154/211 (72%), Gaps = 4/211 (1%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R D+DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKA
Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ +
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQK-Q 182
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+A+ G N D +K CC
Sbjct: 183 NSTRTSAITLG---NAQAGQDPGLGEKRACC 210
>gi|357121819|ref|XP_003562615.1| PREDICTED: ras-related protein RABA5a-like [Brachypodium
distachyon]
Length = 223
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/222 (55%), Positives = 157/222 (70%), Gaps = 7/222 (3%)
Query: 3 AYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
AY D++ DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + D K
Sbjct: 2 AYGGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD+TR TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+L+GNK DL+H R VST + A AE + FFMETSAL+S NV+ AF V+ +IY ++SR
Sbjct: 122 TILIGNKTDLKHAREVSTAEGKALAEAQGLFFMETSALDSSNVKAAFQTVVKEIYSILSR 181
Query: 181 KALEIGD----DPAALPKGQTINVGTKDDVSAVKKVG-CCSN 217
K + + D +L G+ + + T A G CCS+
Sbjct: 182 KVFQCQEQKRSDLQSLSNGKAVVLQTDAPKEANSGRGWCCSS 223
>gi|301783133|ref|XP_002926982.1| PREDICTED: ras-related protein Rab-25-like [Ailuropoda melanoleuca]
Length = 213
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 145/177 (81%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
RA++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
GNK+DL+ R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLQQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|74137312|dbj|BAE22024.1| unnamed protein product [Mus musculus]
Length = 193
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 126/215 (58%), Positives = 150/215 (69%), Gaps = 31/215 (14%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFK ESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFK-------------------------ESKSTIGVEFATRSIQVDGKTIKAQI 39
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH DSNIVIMLVGN
Sbjct: 40 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 99
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DLRHLRAV T++A AFAE+ N F+ETSA++S NVE AF +LT+IYR+VS+K +I
Sbjct: 100 KSDLRHLRAVPTDEARAFAEKNNLSFIETSAMDSTNVEEAFKNILTEIYRIVSQK--QIA 157
Query: 187 DDPA--ALPKGQTINVGTKD--DVSAVKKVGCCSN 217
D A P +++ D K+ CC +
Sbjct: 158 DRAAHDESPGNNVVDISVPPTTDGQRPNKLQCCQS 192
>gi|89257513|gb|ABD65003.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 221
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 122/221 (55%), Positives = 158/221 (71%), Gaps = 6/221 (2%)
Query: 1 MGAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD 59
M Y D+ DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I +
Sbjct: 1 MAFYSEDNKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIVING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRVQTFQSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
V +LVGNK+DL+ +R V T + A AE + FFMETSAL+S NV AF V+ +IY ++S
Sbjct: 121 VTILVGNKSDLKDIREVPTSEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILS 180
Query: 180 RKALEIGD----DPAALPKGQTINVGTKDDVSAVKKVGCCS 216
RK + + DPA+L G+ + + ++ + S GCCS
Sbjct: 181 RKVMTSQELNKQDPASLSNGKKVVIPSEGE-SKTGGGGCCS 220
>gi|259089516|ref|NP_001158557.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
gi|225704820|gb|ACO08256.1| Ras-related protein Rab-11A [Oncorhynchus mykiss]
Length = 205
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 115/139 (82%), Positives = 129/139 (92%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRN+F+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNDFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIM N
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMPADN 124
Query: 127 KADLRHLRAVSTEDATAFA 145
K+DLRHLRAV T++A AFA
Sbjct: 125 KSDLRHLRAVPTDEARAFA 143
>gi|1370154|emb|CAA98183.1| RAB11G [Lotus japonicus]
Length = 219
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 149/208 (71%), Gaps = 2/208 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQSLEIDSKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TF++V RWL EL+ H D+ + +MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDITRRTTFDSVSRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++RAVS E+ + AE + FFMETSAL+S NV AF V+ +IY VSRK L A
Sbjct: 131 ENIRAVSIEEGKSLAEAQGLFFMETSALDSTNVRTAFEMVIREIYNNVSRKVLNSDTYKA 190
Query: 191 ALP--KGQTINVGTKDDVSAVKKVGCCS 216
L + +N G + CCS
Sbjct: 191 ELSVDRVSLVNNGAATSKQSKSYFSCCS 218
>gi|367013768|ref|XP_003681384.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
gi|359749044|emb|CCE92173.1| hypothetical protein TDEL_0D05890 [Torulaspora delbrueckii]
Length = 229
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/202 (59%), Positives = 153/202 (75%), Gaps = 2/202 (0%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIGDSGVGKSNLLSRFT N+F++ESKSTIGVEFATR+I + K +KAQIWDTAGQERY
Sbjct: 28 VVLIGDSGVGKSNLLSRFTTNDFNMESKSTIGVEFATRTIEVEGKKIKAQIWDTAGQERY 87
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+DL HLRA
Sbjct: 88 RAITSAYYRGAVGALIVYDISKPSSYENCNHWLTELRENADDNVAVGLIGNKSDLDHLRA 147
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP-AALPK 194
V T++A FA+ F ETSAL+S NVE AF E++T IY++VS+ +++GD PK
Sbjct: 148 VPTDEARNFAQENQLLFTETSALKSENVELAFRELITAIYQMVSKHQVDLGDSGNNNAPK 207
Query: 195 GQTINVGTKDDVSAVKKVG-CC 215
G TI++ + K G CC
Sbjct: 208 GPTISLTPAPNEHKKKSSGNCC 229
>gi|410927462|ref|XP_003977165.1| PREDICTED: ras-related protein Rab-25-like [Takifugu rubripes]
Length = 208
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 159/212 (75%), Gaps = 7/212 (3%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+D+ Y+++FKVVLIG+SGVGKSNLLSR+T+NEF+ +S++TIGVEF+TR++ + +KAQ
Sbjct: 3 SDEAYNFVFKVVLIGESGVGKSNLLSRYTKNEFNHDSRTTIGVEFSTRTVELNGFTIKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+T+H+T++++ERWLKEL +H ++NIV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDITKHLTYDSMERWLKELYEHAEANIVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL R+V TE+A FAE F+E+SALES NVE AF VL +I + K L
Sbjct: 123 NKTDLELERSVPTEEARGFAENHKLLFLESSALESTNVEAAFNNVLMEIQKKTHNKELVQ 182
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
G + +G ++N + ++ K CC N
Sbjct: 183 GAN-----RGVSLNSSKAEIITENKP--CCRN 207
>gi|256066492|ref|XP_002570538.1| rab11 [Schistosoma mansoni]
gi|350644474|emb|CCD60787.1| rab11, putative [Schistosoma mansoni]
Length = 213
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 160/212 (75%), Gaps = 1/212 (0%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R D + LFK+VLIGDSGVGK+NL SRFT +EF+LESKSTIGV+FAT++++ D K+VKA
Sbjct: 3 RKDSNIGLLFKIVLIGDSGVGKTNLRSRFTNDEFNLESKSTIGVDFATKNVKIDGKVVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGA+LVYD+++ TF N+ +WL+EL+++ +++IML+
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGAILVYDISKPHTFLNLNKWLEELKEYASDDVIIMLI 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK DL+HLR V TEDAT +A+++ FMETSAL+S+NVE AF + + IY ++S+
Sbjct: 123 GNKCDLKHLRCVLTEDATRYAKQQGISFMETSALDSINVEEAFNQTIRDIYYLISKHPSF 182
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
++ +P + + + + K+ CC+
Sbjct: 183 NMNETNIIPTNN-LPIQEPNIKQSAKRKFCCT 213
>gi|449439127|ref|XP_004137339.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
gi|449497494|ref|XP_004160418.1| PREDICTED: ras-related protein RABA6a-like [Cucumis sativus]
Length = 218
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 155/213 (72%), Gaps = 4/213 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+D DYLFK VL GDSGVGKSNLLSRF++NEF +S+ TIGVEFA R+I+ DK+VK QI
Sbjct: 6 DEDCDYLFKAVLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR TF+N+++WL+ELR+ + +VI+LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL R V E+A AE EN FFMETSA +++NVE AF E++ +I+ + S+K L++
Sbjct: 126 KCDLHQSREVQEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLH 185
Query: 187 ---DDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+ A P G+ I + + CCS
Sbjct: 186 KKFEKLVAFPNGKEI-ISIHEVTPTKHNSNCCS 217
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 156/208 (75%), Gaps = 8/208 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DYD L+K+VLIGDSGVGK+N+L++FTR EF +SK+TIGVEFA+++I DDK VKAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGA+++YD+T+ +TFENV++W+KEL+++ D ++ IM+VGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
D +H+R V+T+ A A+A+R F+ETSA + NVE+AF +L QIY+ S K ++
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK--SAKVVK--- 180
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCC 215
P+ V D V K GCC
Sbjct: 181 ---PTPQPTKFVVADTDVVKPEKSSGCC 205
>gi|115477389|ref|NP_001062290.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|29647488|dbj|BAC75417.1| putative GTP-binding protein(RAB11G) [Oryza sativa Japonica Group]
gi|113624259|dbj|BAF24204.1| Os08g0525000 [Oryza sativa Japonica Group]
gi|215737031|dbj|BAG95960.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 124/216 (57%), Positives = 152/216 (70%), Gaps = 1/216 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG + +YLFKVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ + K
Sbjct: 1 MGDESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQIWDTAGQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ +
Sbjct: 61 DVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
MLVGNK DL ++R V E+ A AE E FFMETSAL+S NV AF V+ +IY VSR
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSR 180
Query: 181 KALEIGDDPAALPKGQ-TINVGTKDDVSAVKKVGCC 215
K L A L + +I +KDD + GCC
Sbjct: 181 KILNSDSYKAELSLNRVSIEGDSKDDQKQSNRFGCC 216
>gi|164518908|ref|NP_001101157.2| ras-related protein Rab-25 [Rattus norvegicus]
gi|149048128|gb|EDM00704.1| RAB25, member RAS oncogene family (predicted), isoform CRA_b
[Rattus norvegicus]
gi|197246783|gb|AAI68745.1| RAB25, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 143/177 (80%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R D+DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKA
Sbjct: 4 RTDEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|258571595|ref|XP_002544601.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
gi|237904871|gb|EEP79272.1| GTP-binding protein ypt3 [Uncinocarpus reesii 1704]
Length = 203
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/202 (61%), Positives = 145/202 (71%), Gaps = 30/202 (14%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQER 74
++VLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATRSI+ D K +K+QIWDTAGQER
Sbjct: 31 EIVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDTAGQER 90
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
YRAITSAYYRGAVGALLVYD+++H T+ENV RWLKELRDH DSNIVIMLVGNK+DLRHLR
Sbjct: 91 YRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLR 150
Query: 135 AVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA-ALP 193
AV TE+A FA +I+R+VS KAL+ GD L
Sbjct: 151 AVPTEEAKQFA---------------------------KIFRIVSSKALDSGDSAQNPLS 183
Query: 194 KGQTINVGTKDDVSAVKKVGCC 215
+ + + D + K GCC
Sbjct: 184 DRKVVEITKTQDPES--KQGCC 203
>gi|403357125|gb|EJY78180.1| Ras-related protein RABA2a [Oxytricha trifallax]
Length = 266
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/172 (63%), Positives = 143/172 (83%), Gaps = 1/172 (0%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQI 66
++YDYLFK+VLIGD+GVGKSNLL R+T+N+F + S+STIGVEFATR+++ DD VKAQI
Sbjct: 10 ENYDYLFKIVLIGDAGVGKSNLLLRYTKNQFKINSQSTIGVEFATRNLKMGDDCYVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYR AVGAL+VYD+++ +FEN+++W++ELRDH DSNI I L+GN
Sbjct: 70 WDTAGQERYRAITNAYYRNAVGALMVYDISKPNSFENIQKWMQELRDHADSNIAITLIGN 129
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV 178
K+DL+HLRAV EDA A+ F+ETSAL SMNV+ AF ++ +IYR+
Sbjct: 130 KSDLKHLRAVKFEDAQKLAQTYQIPFIETSALNSMNVDAAFMNLINEIYRLT 181
>gi|225678958|gb|EEH17242.1| GTP-binding protein yptV1 [Paracoccidioides brasiliensis Pb03]
Length = 222
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/224 (57%), Positives = 155/224 (69%), Gaps = 17/224 (7%)
Query: 6 ADDDYDYLFKVVL--------IGDSGVGKSNLL----SRFTRNEFSLESKSTIGVEFATR 53
A+D+YD+LFK + S + S ++ RFTRNEF+L+SKSTIGVEFATR
Sbjct: 2 ANDEYDFLFKGISPAKFCEGSTAPSTIHTSQIILPMKYRFTRNEFNLDSKSTIGVEFATR 61
Query: 54 SIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRD 113
SI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD T+ TF N ERWLKELR+
Sbjct: 62 SIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDTTKKQTFANCERWLKELRE 121
Query: 114 HTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQ 173
H D NIVIMLVGNK D +H+R V T DA FA+ F+ETSAL++ NVE AF +LT+
Sbjct: 122 HADKNIVIMLVGNKIDEKHMRDVKTSDAVEFADEMKLSFIETSALDATNVELAFQNILTE 181
Query: 174 IYRVVSRKALEIGDDPAALPKG--QTINVGTKDDVSAVKKVGCC 215
IYR+VS KALE G + P G + I + D A +K CC
Sbjct: 182 IYRIVSSKALENGSSSQS-PLGDRKVIEISKTQDADAKQK--CC 222
>gi|224068050|ref|XP_002302656.1| predicted protein [Populus trichocarpa]
gi|222844382|gb|EEE81929.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 156/213 (73%), Gaps = 7/213 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVV+IGDS VGK+ +LSRFT++EF +SKSTIGVEF TR++ K++KAQIWDTA
Sbjct: 17 DYVFKVVVIGDSAVGKTQILSRFTKDEFCFDSKSTIGVEFQTRTVTIKGKVIKAQIWDTA 76
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+L+YD+T+ TF++V RW+ ELR H D++IVIML+GNK DL
Sbjct: 77 GQERYRAVTSAYYRGALGAMLLYDITKRPTFDHVVRWVDELRAHADNSIVIMLIGNKVDL 136
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
LRAV EDA FAE + FF ETSA NV++AF +L +IY V +KALE G+ +
Sbjct: 137 VDLRAVPAEDAVEFAEDQGLFFSETSAFSGDNVDSAFFRLLEEIYDTVCKKALECGNGNS 196
Query: 191 ALP-----KGQTIN--VGTKDDVSAVKKVGCCS 216
+ KG I+ GT ++S VKK CS
Sbjct: 197 NVADAITLKGSKIDGISGTDLEISEVKKSSACS 229
>gi|340500435|gb|EGR27312.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 246
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/172 (62%), Positives = 145/172 (84%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M + D+++D++FK+VLIGDS VGKSNLLSRFT+++F + K+TIGVEFATRSI D+K
Sbjct: 1 MTTIKKDEEHDFIFKIVLIGDSNVGKSNLLSRFTKDQFFQDQKTTIGVEFATRSIITDNK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERY++IT+AYYRGAVGALL+YD+T++++F N+++WL E+RDH + +IV
Sbjct: 61 LIKAQIWDTAGQERYKSITTAYYRGAVGALLIYDITKYLSFTNIQKWLNEIRDHAEPHIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
IMLVGNK+DL+HLR V E+AT FAE N F+E SAL+S NVE +F ++T
Sbjct: 121 IMLVGNKSDLKHLRQVKQEEATLFAENNNIAFIEASALDSSNVELSFYRLIT 172
>gi|449281797|gb|EMC88784.1| Ras-related protein Rab-25 [Columba livia]
Length = 213
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/181 (62%), Positives = 147/181 (81%), Gaps = 2/181 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG+ A++DY+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR+I D
Sbjct: 1 MGS--AEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTIMVGDA 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAG ERYRAITSAYYRGAVGAL+V+D+T+H T++ VERWLKEL DH ++NIV
Sbjct: 59 VVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEANIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK DL R V E+A FA+ F+ETSAL+S NVE AF +L +I+ V +
Sbjct: 119 VMLVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEQAFETILKEIFHKVQQ 178
Query: 181 K 181
+
Sbjct: 179 Q 179
>gi|148908929|gb|ABR17569.1| unknown [Picea sitchensis]
Length = 217
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 150/214 (70%), Gaps = 5/214 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D DYLFKVVLIGDS VGKSNLLSR+ RNEF + SK+TIGVEF T+S+ D K +KAQI
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D NIV MLVGN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL LR V E++ A AE E FF+ETSAL + NV +AF V+ ++Y +SRKAL
Sbjct: 124 KCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSD 183
Query: 187 DDPAALPKGQTINV-----GTKDDVSAVKKVGCC 215
L ++ V G + +KK CC
Sbjct: 184 SYKPKLLSNRSTKVSLVPNGDAATKTGLKKYACC 217
>gi|1172845|sp|P46629.1|RAB25_RABIT RecName: Full=Ras-related protein Rab-25; Flags: Precursor
gi|436001|gb|AAA31261.1| small GTP-binding protein, partial [Oryctolagus cuniculus]
Length = 213
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/214 (57%), Positives = 156/214 (72%), Gaps = 10/214 (4%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS+ +I
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK---QIQ 182
Query: 187 DDPAALPKGQTINVGTK---DDVSAVKKVGCCSN 217
+ P+ I +G+ + +K CC N
Sbjct: 183 NS----PRSNAIALGSAQAGQEPGPGQKRACCIN 212
>gi|224131546|ref|XP_002321111.1| predicted protein [Populus trichocarpa]
gi|222861884|gb|EEE99426.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 150/207 (72%), Gaps = 1/207 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+D+ + +MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R VS E+A AE E FFMETSAL+S NV+ AF V+ +IY VSRK L A
Sbjct: 130 ENIRDVSVEEAKCLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 191 ALPKGQTINVGTKDDVSAVKK-VGCCS 216
L + V +D + CCS
Sbjct: 190 ELSLNRVTLVNNGNDSKQAQSYFSCCS 216
>gi|357148531|ref|XP_003574801.1| PREDICTED: ras-related protein RABA5c-like [Brachypodium
distachyon]
Length = 217
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 147/207 (71%), Gaps = 2/207 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFKVV+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+++ D K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQTMEIDSKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GALLVYDV+R TF+NV RWL+EL H+D+ + MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDVSRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R V E+ A AE E FFMETSAL+S NV AF V+ +IY VSRK L A
Sbjct: 131 ENIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYSSVSRKILNSDSYKA 190
Query: 191 ALPKGQTI--NVGTKDDVSAVKKVGCC 215
L + N G+KD + GCC
Sbjct: 191 ELTLNRVSIHNDGSKDGQKQGSRFGCC 217
>gi|356512992|ref|XP_003525198.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 217
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/213 (55%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDSGVGKSN+LSRF ++EF L+SK TIGVEFA R+IR DK++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNMLSRFAKDEFRLDSKPTIGVEFAYRNIRVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD++ ++ENV +WL ELR+ ++V++LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISMRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--E 184
K DL R V E+ FAE E FMETSAL+++NVE F +++T+IY + S+K L +
Sbjct: 126 KCDLDESREVEKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAAK 185
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVG-CCS 216
+ + P L G+ I++ D+V+A K+ CCS
Sbjct: 186 MEEQPINLLNGKEIHIA--DEVTATKQTSTCCS 216
>gi|224285593|gb|ACN40515.1| unknown [Picea sitchensis]
Length = 217
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 151/214 (70%), Gaps = 5/214 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D DYLFKVVLIGDS VGKSNLLSR+ RNEF + SK+TIGVEF T+S+ D K +KAQI
Sbjct: 4 DPGEDYLFKVVLIGDSAVGKSNLLSRYARNEFHMNSKATIGVEFQTQSMEFDGKEIKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D NIV MLVGN
Sbjct: 64 WDTAGQERFRAVTSAYYRGAVGALVVYDISRRHTFESVGRWLDELKMHSDMNIVTMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL LR V E++ A AE E FF+ETSAL + NV +AF V+ ++Y +SRKAL
Sbjct: 124 KCDLETLREVPIEESKALAEAEKLFFIETSALNATNVNDAFQIVIKEVYNNMSRKALNSD 183
Query: 187 DDPAALPKGQTINV-----GTKDDVSAVKKVGCC 215
+ L ++ V G + +KK CC
Sbjct: 184 SYKSKLLSNRSTKVSLVPNGDAATKTELKKYACC 217
>gi|345802588|ref|XP_547540.3| PREDICTED: ras-related protein Rab-25 [Canis lupus familiaris]
gi|334350816|sp|E2RQ15.1|RAB25_CANFA RecName: Full=Ras-related protein Rab-25; Flags: Precursor
Length = 213
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 154/219 (70%), Gaps = 20/219 (9%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R ++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KA
Sbjct: 4 RTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--- 181
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLHQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQRQN 183
Query: 182 -----ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
A+ +G A G A +K CC
Sbjct: 184 STRTNAIALGSAQAGQEPG------------AGQKRACC 210
>gi|395532154|ref|XP_003768136.1| PREDICTED: ras-related protein Rab-25 [Sarcophilus harrisii]
Length = 213
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/176 (65%), Positives = 144/176 (81%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQ
Sbjct: 5 AEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVG
Sbjct: 65 IWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
NK+DL H R V T++A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 125 NKSDLSHAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 180
>gi|242046428|ref|XP_002461085.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
gi|241924462|gb|EER97606.1| hypothetical protein SORBIDRAFT_02g040430 [Sorghum bicolor]
Length = 222
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 155/221 (70%), Gaps = 6/221 (2%)
Query: 3 AYRADD--DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
AY DD DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + D K
Sbjct: 2 AYDGDDGQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+LVGNK DL+H R VST + A AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILVGNKTDLKHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSR 181
Query: 181 KALEIGDDP----AALPKGQTINVGTKDDVSAVKKVGCCSN 217
K + + +L G+ + + + + ++ CCS+
Sbjct: 182 KVFQSLEQKKSELQSLSNGKAVVLQGETNQTSSGGRWCCSS 222
>gi|440292583|gb|ELP85770.1| rab11, putative [Entamoeba invadens IP1]
Length = 208
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 151/210 (71%), Gaps = 3/210 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
A +DYDYL+K+VLIG+SGVGKSNLL RFTRNEF E +STIGVEFATRSI+ + K+++AQ
Sbjct: 2 AQEDYDYLYKIVLIGESGVGKSNLLLRFTRNEFDPEKRSTIGVEFATRSIQHEQKVIRAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAIT+AYYRGAVGAL+VYD+T+ +F+++ERWL EL+D+ D IV+M+VG
Sbjct: 62 IWDTAGQERYRAITNAYYRGAVGALIVYDITKESSFKSIERWLSELKDNADPKIVVMVVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NKADL R V A F E + FF ETSAL+ NVE AF +L +IY+ + +
Sbjct: 122 NKADLSQTREVDESTAKTFCENQKLFFFETSALDGTNVETAFKNLLIEIYK---QNVSNL 178
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
++ +P+ + V + + K CC
Sbjct: 179 DENAQKVPQEKPDIVPIEPVLPNGDKSKCC 208
>gi|385303217|gb|EIF47306.1| gtp-binding protein ypt32 ypt11 [Dekkera bruxellensis AWRI1499]
Length = 220
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 158/217 (72%), Gaps = 8/217 (3%)
Query: 6 ADD---DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
ADD DY+YLFK+VLIGDS VGK+NLLSRFTR+EF+ +S++TIGVEFATR++ + K +
Sbjct: 5 ADDYSYDYEYLFKIVLIGDSSVGKTNLLSRFTRDEFNPDSRATIGVEFATRTLEINGKRI 64
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRAIT+AYYRGAVGAL+VYD++ ++E+V RWLKE+++H D+NIVI
Sbjct: 65 KAQIWDTAGQERYRAITAAYYRGAVGALVVYDISNSDSYESVSRWLKEMKEHADANIVIA 124
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK+DL HLRAV TE+A FA N F E SAL + NVE F +++ IY +VS++
Sbjct: 125 LVGNKSDLEHLRAVPTEEARNFAAEHNLLFTEASALNADNVEFTFHQLIKSIYDMVSKRK 184
Query: 183 LEIGDDPAA----LPKGQTINVGTKDDVSAVKKVGCC 215
++ ++ A K T+ KD K CC
Sbjct: 185 FDMDENGVANKDLNSKTITLTPAPKDK-KVSKNSNCC 220
>gi|354481560|ref|XP_003502969.1| PREDICTED: ras-related protein Rab-25-like [Cricetulus griseus]
Length = 213
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/219 (57%), Positives = 156/219 (71%), Gaps = 20/219 (9%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK----- 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQRQNST 185
Query: 182 ---ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
A+ +G+ A GQ D +K CC N
Sbjct: 186 RANAITLGNAEA----GQ--------DSGPGEKRACCIN 212
>gi|291397790|ref|XP_002715439.1| PREDICTED: RAB25, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 213
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/214 (56%), Positives = 154/214 (71%), Gaps = 10/214 (4%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQNQNS- 184
Query: 187 DDPAALPKGQTINVGTK---DDVSAVKKVGCCSN 217
P+ I +G+ + +K CC N
Sbjct: 185 ------PRSNAIALGSAQAGQEPGPGQKRACCIN 212
>gi|70937938|ref|XP_739710.1| small GTPase Rab11 [Plasmodium chabaudi chabaudi]
gi|56516907|emb|CAH87623.1| small GTPase Rab11, putative [Plasmodium chabaudi chabaudi]
Length = 202
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/187 (63%), Positives = 149/187 (79%), Gaps = 3/187 (1%)
Query: 32 RFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQIWDTAGQERYRAITSAYYRGAVGAL 90
RFTR+EF+LESKSTIGVEFAT+SI+ +DKI+KAQIWDTAGQERYRAITSAYYRGAVGAL
Sbjct: 16 RFTRDEFNLESKSTIGVEFATKSIQLKNDKIIKAQIWDTAGQERYRAITSAYYRGAVGAL 75
Query: 91 LVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENT 150
LVYD+T+ TFEN+E+WLKELRD+ DSNIVI+LVGNK+DL+HLR ++ DAT FA++E
Sbjct: 76 LVYDITKKNTFENIEKWLKELRDNADSNIVILLVGNKSDLKHLRVINDNDATQFAKKEKL 135
Query: 151 FFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAAL-PKGQTINVGTKDDVSAV 209
F+ETSALE+ NVE AF ++L +IY V +K +D + P+G+ INV +D +
Sbjct: 136 AFIETSALEATNVELAFHQLLNEIYNVRQKKQATKSEDNVNIQPRGKKINVDDDNDENEK 195
Query: 210 K-KVGCC 215
K K CC
Sbjct: 196 KPKTKCC 202
>gi|212723946|ref|NP_001131951.1| uncharacterized protein LOC100193344 [Zea mays]
gi|194693006|gb|ACF80587.1| unknown [Zea mays]
gi|195620812|gb|ACG32236.1| ras-related protein ARA-4 [Zea mays]
gi|414887766|tpg|DAA63780.1| TPA: Ras protein ARA-4 isoform 1 [Zea mays]
gi|414887767|tpg|DAA63781.1| TPA: Ras protein ARA-4 isoform 2 [Zea mays]
Length = 222
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 152/211 (72%), Gaps = 4/211 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLL+RF RNEF SKSTIGVEF T+ + D K +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL +H+D N+V +LVGNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHNHSDMNVVTILVGNKTDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI----G 186
+H R VST + A AE + FFMETSAL+S NV AF V+ +IY ++SRK +
Sbjct: 132 KHAREVSTAEGQALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYSILSRKVFQSLEQKK 191
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ +L G+ + + + + ++ CCS+
Sbjct: 192 SELQSLSSGKAVVLQGEANQTSSGGRWCCSS 222
>gi|403345507|gb|EJY72124.1| hypothetical protein OXYTRI_06879 [Oxytricha trifallax]
Length = 266
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 144/170 (84%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D YD+LFK+VLIGDSGVGKSNLL R+T+N+F + S+STIGVEFATRSI+ +D+ V+AQIW
Sbjct: 9 DHYDHLFKIVLIGDSGVGKSNLLLRYTKNQFKINSQSTIGVEFATRSIQVEDQFVRAQIW 68
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYR AVGALLVYD+T++ T++N+ERW+ ELR+H + +I ++LVGNK
Sbjct: 69 DTAGQERYRAITNAYYRNAVGALLVYDITKYNTYQNIERWITELREHAEYSISVLLVGNK 128
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRV 177
+DL+ RAVS E+A A+A+ N F+ETSAL++ NVE AF +V+ IY+
Sbjct: 129 SDLKSQRAVSFEEANAYAKNNNIHFIETSALDATNVEIAFVKVIQDIYQT 178
>gi|444719050|gb|ELW59850.1| Ras-related protein Rab-25 [Tupaia chinensis]
Length = 213
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/175 (65%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+DDY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 156/208 (75%), Gaps = 8/208 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DYD L+K+VLIGDSGVGK+N+L++FTR EF +SK+TIGVEFA++++ DDK +KAQIW
Sbjct: 6 EDYDLLYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIW 65
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAITSAYYRGAVGA+++YD+T+ +TFENV++W+KEL+++ D ++ IM+VGNK
Sbjct: 66 DTAGQERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADPSLQIMIVGNK 125
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
D +H+R V+T+ A A+A+R F+ETSA + NVE+AF +L QIY+ S K ++
Sbjct: 126 TDQKHIRQVATDCAIAYAQRNGVAFIETSAKDGTNVEDAFKNILQQIYK--SAKVVK--- 180
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCC 215
P+ V D V K GCC
Sbjct: 181 ---PTPQPTKFVVADTDVVKPEKSSGCC 205
>gi|356535256|ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
Length = 223
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 156/212 (73%), Gaps = 5/212 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---EIG- 186
+ R V+T + A AE + FFMETSAL+S NV AF V+ +IY ++SRK + E+
Sbjct: 132 KDAREVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMISQELNK 191
Query: 187 DDPAALPKGQTINVGTKDDVSAVK-KVGCCSN 217
D + G+T+ + + DV A + K GCCS+
Sbjct: 192 QDVTRIENGKTVVLQGEGDVEAAQSKKGCCSS 223
>gi|115473561|ref|NP_001060379.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|22093831|dbj|BAC07118.1| putative Rab GTP-binding protein Rab11a [Oryza sativa Japonica
Group]
gi|113611915|dbj|BAF22293.1| Os07g0634200 [Oryza sativa Japonica Group]
gi|215734858|dbj|BAG95580.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200085|gb|EEC82512.1| hypothetical protein OsI_26999 [Oryza sativa Indica Group]
Length = 220
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/220 (54%), Positives = 157/220 (71%), Gaps = 6/220 (2%)
Query: 3 AYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
AY D++ DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + D K
Sbjct: 2 AYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+LVGNK DL+H R VST + A AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSR 181
Query: 181 KALEIGDDP---AALPKGQTINVGTKDDVSAVKKVGCCSN 217
K + + +L G+ + + ++ ++ + CCS+
Sbjct: 182 KVFQSQEQKRSEQSLSNGKPVMLSDSNEPTSGGRW-CCSS 220
>gi|224086488|ref|XP_002307897.1| predicted protein [Populus trichocarpa]
gi|222853873|gb|EEE91420.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 160/225 (71%), Gaps = 8/225 (3%)
Query: 1 MGAYRADDDYD-YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD 59
M Y DD D YLFK+VLIGDS VGKSNLL+RF RNEF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKADDYLFKIVLIGDSAVGKSNLLARFARNEFYPSSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF+++ +WL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGKWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
V +LVGNK+DL+ R VST + A AE + FFMETSAL+S NV AF V+ +IY ++S
Sbjct: 121 VTILVGNKSDLKDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 RKAL--EIGDDPAA--LPKGQTINV---GTKDDVSAVKKVGCCSN 217
RK + + + P A L G+T+ + G ++ + KK CCS+
Sbjct: 181 RKVMMSQELNKPGAPELGNGKTVVLKGDGDQEGNAGTKKGWCCSS 225
>gi|126031605|pdb|2OIL|A Chain A, Crystal Structure Of Human Rab25 In Complex With Gdp
Length = 193
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 142/177 (80%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R +DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKA
Sbjct: 17 RGSEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 76
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 77 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 136
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 137 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 193
>gi|410986758|ref|XP_003999676.1| PREDICTED: ras-related protein Rab-25 [Felis catus]
Length = 213
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 143/177 (80%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R ++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KA
Sbjct: 4 RTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
GNK+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|224065032|ref|XP_002301639.1| predicted protein [Populus trichocarpa]
gi|222843365|gb|EEE80912.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 152/208 (73%), Gaps = 3/208 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+D+ + +MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R VS E+ + AE E FFMETSAL+S NV+ AF V+ +IY VSRK L A
Sbjct: 130 ENIRDVSVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 191 ALPKGQT--INVGTKDDVSAVKKVGCCS 216
L + +N G+ D A CCS
Sbjct: 190 ELSLNRVTLVNNGS-DSKQAQGYFSCCS 216
>gi|42561732|ref|NP_563750.2| RAB GTPase homolog A5E [Arabidopsis thaliana]
gi|29893534|gb|AAP06819.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|332189776|gb|AEE27897.1| RAB GTPase homolog A5E [Arabidopsis thaliana]
Length = 261
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/220 (58%), Positives = 157/220 (71%), Gaps = 7/220 (3%)
Query: 3 AYRADDD--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
A +DD+ +YLFK+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ + K
Sbjct: 43 AMSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGK 102
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ +
Sbjct: 103 EVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVA 162
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
MLVGNK DL ++RAVS E+ A AE E FF+ETSAL+S NV+ AF V+ IY VSR
Sbjct: 163 RMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSR 222
Query: 181 KALEIGDDPAALPKGQTINVGTKDDVSAVKK---VGCCSN 217
K L L + V KDD SA K+ CCS+
Sbjct: 223 KQLNSDTYKDELTVNRVSLV--KDDNSASKQSSGFSCCSS 260
>gi|326503068|dbj|BAJ99159.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506770|dbj|BAJ91426.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 223
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 154/223 (69%), Gaps = 9/223 (4%)
Query: 3 AYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
AY D+ DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + D K
Sbjct: 2 AYGGDEQQSQDYLFKIVLLGDSSVGKSNLLARFARNEFFPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD+TR TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDITRRQTFDSVGRWLNELHAHSDMNVV 121
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+L+GNK DL+H R VS + A AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILIGNKTDLKHAREVSPAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVKEIYSILSR 181
Query: 181 KALEIGDDP----AALPKGQTINVGTKDDVSAVKKVG--CCSN 217
K + + +L G+ + V D SA G CCS+
Sbjct: 182 KVFQSQEQKKSELQSLSNGKAV-VLQSDAPSATSSGGRWCCSS 223
>gi|326493914|dbj|BAJ85419.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 219
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 147/207 (71%), Gaps = 2/207 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFKVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 13 EYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGKEVKAQIWDTA 72
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ + MLVGNK DL
Sbjct: 73 GQERFRAVTSAYYRGAFGALLVYDISRRGTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 132
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R V E+ A AE E FFMETSAL+S NV AF V+ +IY VSRK L A
Sbjct: 133 DNIREVPVEEGKALAESEGLFFMETSALDSTNVNTAFELVIKEIYNSVSRKILNSDSYKA 192
Query: 191 ALPKGQTI--NVGTKDDVSAVKKVGCC 215
L + + +KD + GCC
Sbjct: 193 ELSLNRVSIDDSDSKDGQKQTSRFGCC 219
>gi|296229146|ref|XP_002760046.1| PREDICTED: ras-related protein Rab-25 [Callithrix jacchus]
Length = 213
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQ 180
>gi|194036023|ref|XP_001928392.1| PREDICTED: ras-related protein Rab-25 [Sus scrofa]
Length = 213
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 114/177 (64%), Positives = 144/177 (81%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R+++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKA
Sbjct: 4 RSEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
GNK+DL R V T++A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|5714658|gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
Length = 224
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 152/213 (71%), Gaps = 6/213 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL+ H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---EIGD 187
R R VST + A AE + FFMETSAL+S NV AF V+ +IY ++SRK + E+
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 188 DPAALPKGQTINVGTKDDVSAV---KKVGCCSN 217
A L + G ++ A K GCCS+
Sbjct: 192 QDAPLDGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|348579815|ref|XP_003475674.1| PREDICTED: ras-related protein Rab-25-like [Cavia porcellus]
Length = 213
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 154/212 (72%), Gaps = 10/212 (4%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+DDY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KAQI
Sbjct: 6 EDDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL R V T++A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNS- 184
Query: 187 DDPAALPKGQTINVG---TKDDVSAVKKVGCC 215
+ TI +G D S+ +K CC
Sbjct: 185 ------TRTNTITLGDTQPGQDPSSGEKKACC 210
>gi|114085|sp|P19892.1|RAA5E_ARATH RecName: Full=Ras-related protein RABA5e; Short=AtRABA5e; AltName:
Full=Ras-related protein Ara-1; Flags: Precursor
gi|6850310|gb|AAF29387.1|AC009999_7 Strong similarity to a RAS-related protein ARA-1 from Arabidopsis
thaliana gi|114085, and is a member of the RAS PF|00071
family. EST gb|D01026 comes from this gene [Arabidopsis
thaliana]
gi|12083322|gb|AAG48820.1|AF332457_1 putative RAS-related protein ARA-1 [Arabidopsis thaliana]
gi|538283|gb|AAC13655.1| ras-related protein [Arabidopsis thaliana]
Length = 218
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 125/210 (59%), Positives = 152/210 (72%), Gaps = 5/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ + K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++RAVS E+ A AE E FF+ETSAL+S NV+ AF V+ IY VSRK L
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 191 ALPKGQTINVGTKDDVSAVKK---VGCCSN 217
L + V KDD SA K+ CCS+
Sbjct: 190 ELTVNRVSLV--KDDNSASKQSSGFSCCSS 217
>gi|9789019|gb|AAF98238.1| unknown [Homo sapiens]
Length = 256
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|449468736|ref|XP_004152077.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
gi|449502254|ref|XP_004161590.1| PREDICTED: ras-related protein RABA5d-like [Cucumis sativus]
Length = 217
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 149/206 (72%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+ + D K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+D+ + +MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRSTFDSVGRWLDELKTHSDTTVAMMLVGNKCDL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R VS ED T+ AE E FFMETSAL+S NV+ AF V+ +IY VSRK L A
Sbjct: 131 ENIRDVSVEDGTSLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKA 190
Query: 191 ALPKGQTINVGTKDDVSAVKKVGCCS 216
L + V + + CCS
Sbjct: 191 ELSVNRVSLVNNGGSKQSEGYLSCCS 216
>gi|149751384|ref|XP_001499799.1| PREDICTED: ras-related protein Rab-25-like [Equus caballus]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|297663252|ref|XP_002810088.1| PREDICTED: ras-related protein Rab-25 [Pongo abelii]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|15224226|ref|NP_181842.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
gi|114089|sp|P28187.1|RAA5C_ARATH RecName: Full=Ras-related protein RABA5c; Short=AtRABA5c; AltName:
Full=Ras-related protein Ara-4; AltName:
Full=Ras-related protein Rab11F; Short=AtRab11F
gi|217839|dbj|BAA00831.1| small GTP-binding protein [Arabidopsis thaliana]
gi|3763922|gb|AAC64302.1| Ras-related GTP-binding protein (ARA-4) [Arabidopsis thaliana]
gi|107738301|gb|ABF83674.1| At2g43130 [Arabidopsis thaliana]
gi|222423848|dbj|BAH19889.1| AT2G43130 [Arabidopsis thaliana]
gi|330255118|gb|AEC10212.1| Ras-related protein ARA-4 [Arabidopsis thaliana]
Length = 214
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 155/216 (71%), Gaps = 9/216 (4%)
Query: 6 ADDDY---DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
+DDD +YLFK+V+IGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+ D K V
Sbjct: 2 SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RWL EL H+D+ + M
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL +RAVS E+ + AE E FFMETSAL+S NV+ AF V+ +IY +SRK
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181
Query: 183 LEIGDDPAALPKGQTINVGT--KDDVSAVKKVGCCS 216
L + + + T+N + K++ K CCS
Sbjct: 182 L----NSDSYKEELTVNRVSLVKNENEGTKTFSCCS 213
>gi|116812567|ref|NP_065120.2| ras-related protein Rab-25 [Homo sapiens]
gi|109017309|ref|XP_001116371.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Macaca mulatta]
gi|114560206|ref|XP_001163533.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Pan troglodytes]
gi|332220700|ref|XP_003259492.1| PREDICTED: ras-related protein Rab-25 [Nomascus leucogenys]
gi|397500869|ref|XP_003821127.1| PREDICTED: ras-related protein Rab-25 [Pan paniscus]
gi|402856560|ref|XP_003892855.1| PREDICTED: ras-related protein Rab-25 isoform 1 [Papio anubis]
gi|402856562|ref|XP_003892856.1| PREDICTED: ras-related protein Rab-25 isoform 2 [Papio anubis]
gi|426332033|ref|XP_004026997.1| PREDICTED: ras-related protein Rab-25 [Gorilla gorilla gorilla]
gi|46577696|sp|P57735.2|RAB25_HUMAN RecName: Full=Ras-related protein Rab-25; AltName: Full=CATX-8;
Flags: Precursor
gi|14602627|gb|AAH09831.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|23273871|gb|AAH33322.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|119573388|gb|EAW53003.1| RAB25, member RAS oncogene family [Homo sapiens]
gi|190689945|gb|ACE86747.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|190691317|gb|ACE87433.1| RAB25, member RAS oncogene family protein [synthetic construct]
gi|261858756|dbj|BAI45900.1| RAB25, member RAS oncogene family [synthetic construct]
gi|312153252|gb|ADQ33138.1| RAB25, member RAS oncogene family [synthetic construct]
gi|355558553|gb|EHH15333.1| hypothetical protein EGK_01407 [Macaca mulatta]
gi|355745732|gb|EHH50357.1| hypothetical protein EGM_01173 [Macaca fascicularis]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|403293753|ref|XP_003937876.1| PREDICTED: ras-related protein Rab-25 [Saimiri boliviensis
boliviensis]
Length = 213
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHHTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFEKVSKQ 180
>gi|21634443|gb|AAM69362.1|AF274025_1 GTP-binding protein Rab25 [Homo sapiens]
Length = 217
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 10 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 69
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 70 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 129
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 130 KSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 184
>gi|354459567|pdb|3RWM|B Chain B, Crystal Structure Of Ypt32 In Complex With Gppnhp
gi|354459568|pdb|3RWO|B Chain B, Crystal Structure Of Ypt32 In Complex With Gdp
gi|354459569|pdb|3RWO|A Chain A, Crystal Structure Of Ypt32 In Complex With Gdp
Length = 185
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 143/177 (80%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I ++K +KAQIWD
Sbjct: 6 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 65
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAG ERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 66 TAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 125
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
DL HLRAV T++A FA F ETSAL S NV+ AF E++ I+++VS+ +++
Sbjct: 126 DLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQVDL 182
>gi|356524680|ref|XP_003530956.1| PREDICTED: ras-related protein RABA6a-like [Glycine max]
Length = 218
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 161/214 (75%), Gaps = 6/214 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+ DK++KAQI
Sbjct: 6 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVGDKLIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GA+LVYD++R ++ENV +WL ELR+ ++V++LVGN
Sbjct: 66 WDTAGQERFRAITSSYYRGALGAMLVYDISRRSSYENVSKWLLELREFGGEDMVVVLVGN 125
Query: 127 KADLR-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL-- 183
K DL R V E+ FAE E FMETSAL+++NVE F +++T+IY + S+K L
Sbjct: 126 KCDLDGQSREVDKEEGKGFAETEGLCFMETSALKNLNVEEVFLQMITRIYDMTSQKNLAA 185
Query: 184 EIGDDPAALPKGQTINVGTKDDVSAVKKVG-CCS 216
++ + P L G+ I++ D+V+A K+ CCS
Sbjct: 186 KMDEKPINLLNGKEIHIA--DEVTATKQSSTCCS 217
>gi|147902449|ref|NP_001086223.1| RAB25, member RAS oncogene family [Xenopus laevis]
gi|49258038|gb|AAH74344.1| MGC84182 protein [Xenopus laevis]
Length = 216
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 164/219 (74%), Gaps = 16/219 (7%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++D++++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ D +VK+QI
Sbjct: 5 EEDFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H ++E+V+RWLKEL DH D++IV+MLVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KADLR-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY-RVVSRKALE 184
K+DL+ + V +E+A A+AER F+ETSAL++ NVE AF +L IY RV+ K
Sbjct: 125 KSDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFETILRDIYTRVLKSK--- 181
Query: 185 IGDDPAALPKGQTINVGTK----DDVSAV--KKVGCCSN 217
+ + TIN+ + ++ V +K CC N
Sbjct: 182 -----GGIQQPSTINLSKEASPTQSITQVTEQKRSCCQN 215
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/227 (53%), Positives = 158/227 (69%), Gaps = 11/227 (4%)
Query: 1 MGAYRADDDY---DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC 57
M ++ D D+ DY+FKVV+IGDSGVGKS LL+RF RNEF L+SK+TIGVEF T+++
Sbjct: 1 MAQFQGDLDHEGIDYMFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLM 60
Query: 58 DDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS 117
D K+VKAQIWDTAGQERY+AIT+AYYRGA GALL YD+T+ TF ++E+WL EL +H D
Sbjct: 61 DHKLVKAQIWDTAGQERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADK 120
Query: 118 NIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRV 177
NIV+MLVGNK+DL +R V E+A A+++ FF+ETSAL+S NVE AF +L+QIY
Sbjct: 121 NIVVMLVGNKSDLSSIREVPIEEAEDLAKQKGFFFIETSALDSNNVEPAFLGLLSQIYVT 180
Query: 178 VSRKALEIGDDPAALPKGQTINVGTKDDVSAV--------KKVGCCS 216
+S+K + K GTK VS+ K+ CCS
Sbjct: 181 MSKKHITADGRERNWDKVNLEFEGTKLLVSSQEPECQKSKKRFSCCS 227
>gi|395845171|ref|XP_003795316.1| PREDICTED: ras-related protein Rab-25 [Otolemur garnettii]
Length = 213
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSRAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|17380746|gb|AAL36203.1| putative RAS-related protein ARA-1 [Arabidopsis thaliana]
Length = 218
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 152/210 (72%), Gaps = 5/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ + K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL +L+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDQLKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++RAVS E+ A AE E FF+ETSAL+S NV+ AF V+ IY VSRK L
Sbjct: 130 ENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 191 ALPKGQTINVGTKDDVSAVKK---VGCCSN 217
L + V KDD SA K+ CCS+
Sbjct: 190 ELTVNRVSLV--KDDNSASKQSSGFSCCSS 217
>gi|15225121|ref|NP_180726.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
gi|75337278|sp|Q9SIP0.1|RAA5D_ARATH RecName: Full=Ras-related protein RABA5d; Short=AtRABA5d
gi|4582469|gb|AAD24853.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|32815939|gb|AAP88354.1| At2g31680 [Arabidopsis thaliana]
gi|110743709|dbj|BAE99691.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|330253478|gb|AEC08572.1| RAB GTPase-like protein A5D [Arabidopsis thaliana]
Length = 219
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 151/209 (72%), Gaps = 2/209 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+++ + K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
+RAVS E+ A AE E FFMETSAL+S NV+ AF V+ IY +SRK L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYKT 189
Query: 191 ALPKGQTINVGTKDDVSAVKKVG--CCSN 217
L +++ D+ S+ + G CCS+
Sbjct: 190 ELSMKNRVSLVKDDNKSSTQGFGFSCCSS 218
>gi|344286892|ref|XP_003415190.1| PREDICTED: ras-related protein Rab-25-like [Loxodonta africana]
Length = 213
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/219 (55%), Positives = 156/219 (71%), Gaps = 20/219 (9%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R ++DY+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ VKA
Sbjct: 4 RKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVMLGTAAVKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--- 181
GNK+DL R V T++A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 124 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 183
Query: 182 -----ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
A+ +G A GQ + G +K CC
Sbjct: 184 SIRTNAITLGSAQA----GQELGPG--------EKRACC 210
>gi|147899039|ref|NP_001089868.1| uncharacterized protein LOC734934 [Xenopus laevis]
gi|80476446|gb|AAI08571.1| MGC131054 protein [Xenopus laevis]
Length = 216
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/219 (54%), Positives = 163/219 (74%), Gaps = 16/219 (7%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++++++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ D +VK+QI
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTLTVDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H ++ENV+RWLKEL DH D++IV+MLVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYENVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KADLR-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY-RVVSRKALE 184
K DL+ + V +E+A A+AE+ F+ETSAL++ NVE AF +L IY RV+ K
Sbjct: 125 KCDLKDEAQEVPSEEAKAYAEQNGLLFIETSALDATNVEVAFETILRDIYTRVLKLK--- 181
Query: 185 IGDDPAALPKGQTINVGTK----DDVSAV--KKVGCCSN 217
+ + TIN+ + ++ V +K CC N
Sbjct: 182 -----GGIQQPSTINLSKEASPTQSITQVTEQKRSCCQN 215
>gi|403370433|gb|EJY85078.1| Rab-type small GTPase [Oxytricha trifallax]
Length = 254
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/180 (63%), Positives = 147/180 (81%), Gaps = 1/180 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M R ++ YDYLFKVV+IGDSGVGKSNLL R+T+ +F++ESK+TIGVEFAT+SI+ DK
Sbjct: 1 MATTRDEEVYDYLFKVVMIGDSGVGKSNLLMRYTKGDFNIESKTTIGVEFATKSIKTQDK 60
Query: 61 -IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
+VKAQIWDTAGQERYRAIT+AYYRGAVGALLVYDVT +F++V WLKEL+ + DSNI
Sbjct: 61 KVVKAQIWDTAGQERYRAITNAYYRGAVGALLVYDVTCMDSFQHVSNWLKELKQYADSNI 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
VI+LVGNK DL+ R V E+A A+A++ + F+ETSAL+ NV+ AF ++ +IY+V+S
Sbjct: 121 VILLVGNKTDLKDKREVRKEEAAAYADQHSLAFIETSALDCSNVDLAFDRIINEIYKVIS 180
>gi|217072250|gb|ACJ84485.1| unknown [Medicago truncatula]
gi|388507312|gb|AFK41722.1| unknown [Medicago truncatula]
Length = 220
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 147/207 (71%), Gaps = 2/207 (0%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAG 71
YLFKVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ D K VKAQIWDT G
Sbjct: 14 YLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSLEIDSKEVKAQIWDTTG 73
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
QER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H D+ + +MLVGNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDLD 133
Query: 132 HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAA 191
++R VS E+ + AE E FFMETSAL+S NV+ AF V+ +IY VSRK L A
Sbjct: 134 NIRDVSIEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYNNVSRKVLNSDTYKAE 193
Query: 192 LPKGQT--INVGTKDDVSAVKKVGCCS 216
L + +N G + CCS
Sbjct: 194 LSVNRVSLVNNGNSTSKQSKGYFSCCS 220
>gi|405944797|pdb|3TSO|A Chain A, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
gi|405944798|pdb|3TSO|B Chain B, Structure Of The Cancer Associated Rab25 Protein In
Complex With Fip2
Length = 178
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 141/174 (81%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQIW
Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK
Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 124
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
+DL R V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 125 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178
>gi|302783080|ref|XP_002973313.1| rab family GTPase [Selaginella moellendorffii]
gi|300159066|gb|EFJ25687.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 156/221 (70%), Gaps = 6/221 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG + DY+FKVVLIGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+R + K
Sbjct: 1 MGYQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNQNSKATIGVEFQTQSMRINGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQ+WDTAGQER+RA+TSAYYRGA+GAL+VYD+TR TFEN+ +WL ELR + S++V
Sbjct: 61 EVKAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
MLVGNK DL ++R VS E+ AE EN FFMETSAL S NV+ AF V+ +I+ SR
Sbjct: 121 TMLVGNKCDLTNIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSR 180
Query: 181 KALEIG-DDPAALPKGQTINV-GTKDDVS----AVKKVGCC 215
+ + D +P+GQ + + G D S A ++ CC
Sbjct: 181 RIVPDDYDKDDRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|297828009|ref|XP_002881887.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
gi|297327726|gb|EFH58146.1| hypothetical protein ARALYDRAFT_903694 [Arabidopsis lyrata subsp.
lyrata]
Length = 213
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 151/208 (72%), Gaps = 6/208 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 9 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMVIDGKEVKAQIWDTA 68
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFENV RWL EL H+D+ + ML+GNK DL
Sbjct: 69 GQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDL 128
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
+RAVS E+ + AE E FFMETSAL+S NV+ AF V+ +IY +SRK L +
Sbjct: 129 ESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQL----NSD 184
Query: 191 ALPKGQTINVGT--KDDVSAVKKVGCCS 216
+ + T+N + K++ K CCS
Sbjct: 185 SYKEELTVNRVSLVKNENEGTKTFSCCS 212
>gi|1370152|emb|CAA98182.1| RAB11F [Lotus japonicus]
Length = 218
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/219 (56%), Positives = 163/219 (74%), Gaps = 5/219 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M A D+ DYLFK VLIGDSGVGKSNL+SRF ++EF L+SK TIGVEFA R+I+ DK
Sbjct: 1 MAADAFDEQCDYLFKAVLIGDSGVGKSNLISRFAKDEFRLDSKPTIGVEFAYRNIKVRDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQER+RAITS+YYRGA+G +LVYD+TR TF NV +WL ELR+ + ++V
Sbjct: 61 LIKAQIWDTAGQERFRAITSSYYRGALGPMLVYDITRRPTFMNVIKWLHELREFGNEDMV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
++LV NK+DL R V E+ FAE E FMETSAL+++NVE AF E++T+I+ ++S+
Sbjct: 121 VVLVANKSDLVQSREVEKEEGEEFAEIEGLCFMETSALQNLNVEEAFLEMITKIHDIISQ 180
Query: 181 KALEI---GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
K+LE G ++P G+ I V D+V+A K+ CCS
Sbjct: 181 KSLETKMNGPTTLSVPIGKEIQVA--DEVTATKQANCCS 217
>gi|356569119|ref|XP_003552753.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
Length = 219
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 148/208 (71%), Gaps = 2/208 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+ + D K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H D+ + +MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++RAVS ++ + AE E FFMETSAL+S NV+ AF V+ +IY VSRK L A
Sbjct: 131 ENIRAVSVDEGKSLAEAEGLFFMETSALDSTNVKTAFEMVIREIYTNVSRKVLNSETYKA 190
Query: 191 ALPKGQT--INVGTKDDVSAVKKVGCCS 216
L + +N G CCS
Sbjct: 191 ELSVNRVSLVNNGASTSKQNQPYFSCCS 218
>gi|125601208|gb|EAZ40784.1| hypothetical protein OsJ_25262 [Oryza sativa Japonica Group]
Length = 246
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 141/183 (77%), Gaps = 2/183 (1%)
Query: 3 AYRADDDY--DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
AY D++ DYLFK+VL+GDS VGKSNLL+RF RNEF SKSTIGVEF T+ + D K
Sbjct: 2 AYDGDEEQSQDYLFKIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGK 61
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+V
Sbjct: 62 EIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNVV 121
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+LVGNK DL+H R VST + A AE + FFMETSAL+S NV AF V+ +IY ++SR
Sbjct: 122 TILVGNKTDLKHAREVSTAEGKALAESQGLFFMETSALDSSNVAEAFQTVVKEIYGILSR 181
Query: 181 KAL 183
K L
Sbjct: 182 KDL 184
>gi|560504|emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098296|prf||2115367D small GTP-binding protein
Length = 223
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/213 (56%), Positives = 153/213 (71%), Gaps = 7/213 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMEINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA-----LEI 185
+ R V T + A AE + FFMETSAL+S NV +AF V+ +IY ++SRK L+
Sbjct: 132 KDAREVPTPEGKALAEAQGLFFMETSALDSSNVVSAFQTVVKEIYNILSRKVMMSQELKK 191
Query: 186 GDDPAALPKGQTINVGTKD-DVSAVKKVGCCSN 217
D P G+T+ + D +V K GCCS+
Sbjct: 192 QDTPWT-ENGKTVVLQEGDREVEVESKKGCCSS 223
>gi|417397205|gb|JAA45636.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/175 (64%), Positives = 142/175 (81%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V T++A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 180
>gi|226493760|ref|NP_001152371.1| ras-related protein ARA-4 [Zea mays]
gi|194698180|gb|ACF83174.1| unknown [Zea mays]
gi|195655655|gb|ACG47295.1| ras-related protein ARA-4 [Zea mays]
gi|414869586|tpg|DAA48143.1| TPA: hypothetical protein ZEAMMB73_561529 [Zea mays]
Length = 216
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFKVV+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ + K VKAQIWDTA
Sbjct: 11 EYLFKVVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMAIEGKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GALLVYD+TR TF+NV RWL+EL H+D+ + MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAFGALLVYDITRRSTFDNVGRWLQELNTHSDTTVAKMLVGNKCDL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
+R V E+ A AE E FFMETSAL++ NV AF V+ +IY VSRK L A
Sbjct: 131 GDIRQVPVEEGKALAEAEGLFFMETSALDATNVRTAFEIVIREIYSNVSRKVLNSDSYKA 190
Query: 191 ALPKGQ-TINVGTKDDVSAVKKVGCC 215
L + +I+ +KD+ + GCC
Sbjct: 191 ELSLNRVSIDGDSKDEQKQGSRFGCC 216
>gi|224083990|ref|XP_002187600.1| PREDICTED: ras-related protein Rab-25 [Taeniopygia guttata]
Length = 213
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 147/181 (81%), Gaps = 2/181 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG+ A++DY+++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR+I D
Sbjct: 1 MGS--AEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDA 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAG ERYRAITSAYYRGAVGAL+V+D+T+H T++ V+RWLKEL DH +++IV
Sbjct: 59 VVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIV 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
+MLVGNK DL R V E+A FA+ F+ETSAL+S NVE AF +L +I+ V +
Sbjct: 119 VMLVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQK 178
Query: 181 K 181
+
Sbjct: 179 Q 179
>gi|449443538|ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA5a-like
[Cucumis sativus]
Length = 224
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 156/213 (73%), Gaps = 6/213 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I + K +KAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIEINGKEIKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---EI-G 186
+ R V T + + AE + FF+ETSAL+S NV NAF V+ +IY ++SRK + E+
Sbjct: 132 KDAREVPTAEGKSLAEAQGLFFIETSALDSSNVTNAFQTVVKEIYNILSRKVMISQELKK 191
Query: 187 DDPAALPKGQ-TINVGTKDDVSA-VKKVGCCSN 217
D + + G+ T+ + +D V KK GCCS+
Sbjct: 192 QDVSWMENGKTTVVIQGEDQVEGEPKKGGCCSS 224
>gi|126307642|ref|XP_001367187.1| PREDICTED: ras-related protein Rab-25-like [Monodelphis domestica]
Length = 213
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 152/209 (72%), Gaps = 4/209 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQI
Sbjct: 6 EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGN
Sbjct: 66 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL R V T++A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 126 KSDLSQAREVPTDEARMFAENNGLLFIETSALDSTNVELAFETVLKEIFTKVSKQRQNNS 185
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
A N ++ +V++ CC
Sbjct: 186 RANAVTLS----NAQPGQELGSVERKACC 210
>gi|1370144|emb|CAA98178.1| RAB11B [Lotus japonicus]
Length = 242
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/217 (55%), Positives = 160/217 (73%), Gaps = 8/217 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D DY+FKVV+IGDS VGK+ +LSRF +NEF +SK+TIGVEF TR++ + K++KAQIW
Sbjct: 22 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIW 81
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW++ELR H DS+IVIML+GNK
Sbjct: 82 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNK 141
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI-YRVVSRKALEIG 186
DL R V +EDA FAE + FF ETSAL NVE+AF ++L +I RVVS+++L
Sbjct: 142 GDLVDQRVVLSEDAVEFAEEQGLFFSETSALTGENVESAFLKLLQEINTRVVSKRSLSDC 201
Query: 187 D-----DPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
+ + KG I+V G + +++ VKKV CS
Sbjct: 202 NHGKKTNGGNSLKGSKIDVISGPELEITEVKKVPSCS 238
>gi|297826611|ref|XP_002881188.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
gi|297327027|gb|EFH57447.1| hypothetical protein ARALYDRAFT_902201 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 150/209 (71%), Gaps = 2/209 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+++ + K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
+RAVS E+ A AE E FFMETSAL+S NV+ AF V+ IY VSRK L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNVSRKQLNSDTYKT 189
Query: 191 ALPKGQTINVGTKDDVSAVKKVG--CCSN 217
L +++ D+ + + G CCS+
Sbjct: 190 ELSMKNRVSLVKDDNKGSTQGFGFSCCSS 218
>gi|46559001|emb|CAG27070.1| small GTPase [Medicago sativa]
Length = 218
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 161/212 (75%), Gaps = 4/212 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++ DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+ DK++KAQI
Sbjct: 9 EEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 68
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ++E+V RWL ELR+ +V++LVGN
Sbjct: 69 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 128
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE-- 184
K DL R V E+A FAE E FMETSAL+++NVE F +++T I+ + ++++L+
Sbjct: 129 KCDLGESREVEEEEAKGFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 188
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+ + P L G+ I++ D+V+A K+ CCS
Sbjct: 189 MDETPINLSNGKEIHIA--DEVTATKQAPCCS 218
>gi|356527445|ref|XP_003532321.1| PREDICTED: ras-related protein RABA5d-like [Glycine max]
gi|499068|emb|CAA54506.1| GTPase [Glycine max]
Length = 219
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 148/208 (71%), Gaps = 2/208 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+ + D K VKAQIWDTA
Sbjct: 11 EYLFKIVIIGDSAVGKSNLLSRYARNEFNMHSKATIGVEFQTQCLEIDSKEVKAQIWDTA 70
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H D+ + +MLVGNK DL
Sbjct: 71 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHCDTTVAMMLVGNKCDL 130
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++RAVS ++ + AE E FFMETSAL+S NV+ AF V+ +IY VSRK L A
Sbjct: 131 ENIRAVSIDEGKSLAEAEGLFFMETSALDSTNVKMAFEMVIREIYNNVSRKVLNSETYKA 190
Query: 191 ALPKGQT--INVGTKDDVSAVKKVGCCS 216
L + +N G CCS
Sbjct: 191 ELSVNRVSLVNNGAATSKQNQTYFSCCS 218
>gi|297843374|ref|XP_002889568.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
gi|297335410|gb|EFH65827.1| hypothetical protein ARALYDRAFT_887774 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 152/210 (72%), Gaps = 5/210 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEFS SK+TIGVEF T+S+ + K VKAQIWDTA
Sbjct: 10 EYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMAIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++RAVS ++ A AE E FF+ETSAL+S NV+ AF V+ IY VSRK L
Sbjct: 130 ENIRAVSVDEGKALAEAEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKD 189
Query: 191 ALPKGQTINVGTKDDVSAVKK---VGCCSN 217
L + V KDD SA K+ CCS+
Sbjct: 190 KLTVNRVSLV--KDDNSASKQSSGFSCCSS 217
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/226 (53%), Positives = 163/226 (72%), Gaps = 11/226 (4%)
Query: 1 MGAYRADDD--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCD 58
M ++ D D DY+FKVV++GDSGVGKS LL+RF RNEF ++SK+TIGVEF T+++ D
Sbjct: 1 MAQWQGDSDEGIDYMFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMD 60
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN 118
K+VKAQIWDTAGQERY+AIT+AYYRGA GALL YD+T +F++VE+WL ELR H D N
Sbjct: 61 HKVVKAQIWDTAGQERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHAD-N 119
Query: 119 IVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV 178
I++MLVGNK+DL RAV E+A FA+++ FF+ETSAL+S NVE+AF +L+QIY V
Sbjct: 120 IIVMLVGNKSDLSSGRAVPMEEAKDFAKQKGLFFVETSALDSNNVESAFLGLLSQIYATV 179
Query: 179 SRKAL-----EIGDDPAALP-KGQTINVGTKDD--VSAVKKVGCCS 216
+K + E+ D L +G I V +++ A ++ CCS
Sbjct: 180 GKKHIIAEGAELNWDKVNLELEGIKIKVSSQEAECQKAKRRFDCCS 225
>gi|302789646|ref|XP_002976591.1| rab family GTPase [Selaginella moellendorffii]
gi|300155629|gb|EFJ22260.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 155/221 (70%), Gaps = 6/221 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG + DY+FKVVLIGDS VGKSNLL+R+ RNEF+ SK+TIGVEF T+S+R + K
Sbjct: 1 MGYQEEEAGEDYIFKVVLIGDSAVGKSNLLTRYARNEFNHNSKATIGVEFQTQSMRINGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQ+WDTAGQER+RA+TSAYYRGA+GAL+VYD+TR TFEN+ +WL ELR + S++V
Sbjct: 61 EVKAQVWDTAGQERFRAVTSAYYRGALGALVVYDITRKQTFENISKWLDELRTYGGSSVV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
MLVGNK DL +R VS E+ AE EN FFMETSAL S NV+ AF V+ +I+ SR
Sbjct: 121 TMLVGNKCDLTDIREVSVEEGKELAESENLFFMETSALASTNVKTAFQNVVREIFDAKSR 180
Query: 181 KALEIG-DDPAALPKGQTINV-GTKDDVS----AVKKVGCC 215
+ + D +P+GQ + + G D S A ++ CC
Sbjct: 181 RIVPDDYDKDDRVPRGQKLGLNGAGDGKSPQDDATRRFSCC 221
>gi|303730|dbj|BAA02108.1| GTP-binding protein [Pisum sativum]
gi|738933|prf||2001457A GTP-binding protein
Length = 215
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 144/211 (68%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
D +YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+++ D K VKAQ
Sbjct: 5 GDGAEEYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQTVEIDGKEVKAQ 64
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQER+RA+TSAYYRGA GAL+VYD++R TF++++RWL EL DS + MLVG
Sbjct: 65 IWDTAGQERFRAVTSAYYRGAFGALVVYDISRRGTFDSIKRWLDELTTQNDSTVARMLVG 124
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL LR VSTE+ AFAE E FFMETSAL+S NV+ AF V+ +IY +SRK L
Sbjct: 125 NKCDLESLREVSTEEGKAFAEEEGLFFMETSALDSTNVQKAFEIVIREIYNNISRKVLNS 184
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
A L + V + CCS
Sbjct: 185 DSYKAELSVNRVSLVNGAGSKKNLLNFSCCS 215
>gi|297842990|ref|XP_002889376.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
gi|297335218|gb|EFH65635.1| hypothetical protein ARALYDRAFT_470156 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 157/212 (74%), Gaps = 7/212 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVV+IGDS VGK+ LLSRFT+NEF +SKSTIGVEF TR++ K+VKAQIWDTA
Sbjct: 26 DYVFKVVVIGDSAVGKTQLLSRFTQNEFCYDSKSTIGVEFQTRTVTLQGKLVKAQIWDTA 85
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA++VYD+T+ V+F++V RW++ELR H D + VIMLVGNKADL
Sbjct: 86 GQERYRAVTSAYYRGALGAMVVYDITKRVSFDHVARWVEELRAHADDSAVIMLVGNKADL 145
Query: 131 R-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR--VVSRKALEI-G 186
RAV TEDA FAE + FF E SAL NV+ AF +L +I+ VVSRKA+E G
Sbjct: 146 AVDKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAMESDG 205
Query: 187 DDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
P L G I+V G+ ++S +K+ CS
Sbjct: 206 GAPVKL-DGSRIDVISGSDLEISKIKEQASCS 236
>gi|255572910|ref|XP_002527386.1| protein with unknown function [Ricinus communis]
gi|223533238|gb|EEF34993.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 148/208 (71%), Gaps = 2/208 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMEIDGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALIVYDISRRTTFDSVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R V+ E+ + AE E FFMETSAL+S NV+ AF V+ +IY VSRK L A
Sbjct: 130 ENIRDVTVEEGKSLAEAEGLFFMETSALDSTNVKKAFEIVIREIYNNVSRKVLNSDTYKA 189
Query: 191 ALPKGQTINVGTKDDVSAVKKV--GCCS 216
L + V D + CCS
Sbjct: 190 ELSLNRVTLVNNSDGSKQSQSYFSSCCS 217
>gi|145529147|ref|XP_001450362.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831336|emb|CAI39285.1| rab_B71 [Paramecium tetraurelia]
gi|74833805|emb|CAI39363.1| rab_A71 [Paramecium tetraurelia]
gi|124417973|emb|CAK82965.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 152/213 (71%), Gaps = 9/213 (4%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YD+LFK+VLIGDSGVGK+N+L RF N+F LESK TIGVEFAT++++ K VK QI
Sbjct: 6 DEEYDFLFKIVLIGDSGVGKTNILKRFINNDFQLESKPTIGVEFATKTLQQSGKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGA + YDVTR TF+N E+WL EL++H D NIVI+++GN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFICYDVTREPTFKNTEKWLAELKEHADGNIVIIMIGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV----SRKA 182
K D RAV T++A+ F E++ F+ETSAL+ N++ AF +++ I+ + ++K
Sbjct: 126 KTDAVDQRAVRTDEASNFCEQQKIGFIETSALDGTNIDVAFNKIVANIFHTIGSKTAKKV 185
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+++ DP L + +T +K GCC
Sbjct: 186 VQVETDPVVLSEQKTPQSKSKKSSE-----GCC 213
>gi|5714660|gb|AAD48019.1| Rab GTP-binding protein Rab11b [Gossypium hirsutum]
Length = 224
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 151/213 (70%), Gaps = 6/213 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VL GDS VGKSNLL+RF RNEF +SKSTIGVE T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLDGDSAVGKSNLLARFARNEFYPDSKSTIGVELQTQKLDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL+ H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELQTHSDMNVVTILVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---EIGD 187
R R VST + A AE + FFMETSAL+S NV AF V+ +IY ++SRK + E+
Sbjct: 132 RDAREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILSRKVMMSHELKK 191
Query: 188 DPAALPKGQTINVGTKDDVSAV---KKVGCCSN 217
A L + G ++ A K GCCS+
Sbjct: 192 QDAPLDGKTVVLQGDENQERATESPKSGGCCSS 224
>gi|116780906|gb|ABK21873.1| unknown [Picea sitchensis]
Length = 210
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/173 (64%), Positives = 138/173 (79%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+ + D K VKAQIWDTA
Sbjct: 8 EYLFKIVVIGDSAVGKSNLLSRYARNEFNPNSKATIGVEFQTQVMEIDGKEVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R +TF+NV RWL+EL+ H DSN+V MLVGNK+DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALIVYDISRRLTFDNVARWLEELKMHADSNVVKMLVGNKSDL 127
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
H+R V ED AE E FF+ETSAL++ NV AF V+ +IY VS+K L
Sbjct: 128 EHIREVPVEDGRKLAESEGLFFIETSALDNTNVMPAFQIVVREIYNNVSKKML 180
>gi|623584|gb|AAA74116.1| putative, partial [Nicotiana tabacum]
Length = 209
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 148/207 (71%), Gaps = 1/207 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLL+R+ RNEF+L SK+TIGVEF T+++ D K VKAQIWDTA
Sbjct: 2 EYLFKIVIIGDSAVGKSNLLTRYARNEFNLHSKATIGVEFQTQTLEIDGKEVKAQIWDTA 61
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GAL+VYD+TR TF+++ RWL EL+ H+D+ + MLVGNK DL
Sbjct: 62 GQERFRAVTSAYYRGAFGALVVYDITRRTTFDSIPRWLDELKTHSDTTVARMLVGNKCDL 121
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++RAVS E+ + AE E FFMETSAL++ NV AF V+ +IY VSRK L A
Sbjct: 122 DNIRAVSVEEGKSLAESEGMFFMETSALDATNVNKAFDMVIREIYNSVSRKVLNSDSYKA 181
Query: 191 ALPKGQTINVGTKDDVSAVKK-VGCCS 216
L + V D S + CCS
Sbjct: 182 ELSVNRVSLVDNGTDGSKQNQGYSCCS 208
>gi|224139494|ref|XP_002323139.1| predicted protein [Populus trichocarpa]
gi|222867769|gb|EEF04900.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/225 (55%), Positives = 159/225 (70%), Gaps = 9/225 (4%)
Query: 1 MGAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD 59
M Y DD DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + +
Sbjct: 1 MAFYSEDDKAEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYD++R TF++V RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
V +LVGNK+DL+ R V T + AE + FFMETSAL+S NV AF V+ +IY ++S
Sbjct: 121 VTILVGNKSDLKDAREVPTVEGKDLAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 RKAL--EIGDDPAA--LPKGQTINV---GTKDDVSAVKKVGCCSN 217
RK + + + P A L G+T+ + G ++ + KK GCCS+
Sbjct: 181 RKVILSQELNKPGAPELGNGKTVVLQGDGNQEGNAETKK-GCCSS 224
>gi|388514165|gb|AFK45144.1| unknown [Lotus japonicus]
Length = 242
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/217 (54%), Positives = 159/217 (73%), Gaps = 8/217 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
D DY+FKVV+IGDS VGK+ +LSRF +NEF +SK+TIGVEF TR++ + K++KAQIW
Sbjct: 22 DKIDYVFKVVVIGDSAVGKTQILSRFAKNEFCFDSKATIGVEFQTRTVTINAKVIKAQIW 81
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V RW++ELR H DS+IVIML+GNK
Sbjct: 82 DTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWVEELRAHADSSIVIMLIGNK 141
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI-YRVVSRKALEIG 186
D R V +EDA FAE + FF ETSAL NVE+AF ++L +I RVVS+++L
Sbjct: 142 GDFVDQRVVLSEDAVEFAEEQGLFFSETSALTGGNVESAFLKLLQEINTRVVSKRSLSDC 201
Query: 187 D-----DPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
+ + KG I+V G + +++ VKKV CS
Sbjct: 202 NHGKKTNGGNSLKGSKIDVISGPELEITEVKKVPSCS 238
>gi|330792269|ref|XP_003284212.1| Rab GTPase [Dictyostelium purpureum]
gi|325085909|gb|EGC39308.1| Rab GTPase [Dictyostelium purpureum]
Length = 223
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/224 (51%), Positives = 153/224 (68%), Gaps = 16/224 (7%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+++ +YLFK+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI D+KI+ AQ
Sbjct: 2 PEEESEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKIITAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
WDTAGQER+RA+TS YYRGAVGA++VYD+T ++F+NV RWL ELR+ +S+I+IM+VG
Sbjct: 62 CWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAESDILIMMVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL R V T++A AFAE F+ETSAL S NV AF +LT I+ +VS K +
Sbjct: 122 NKSDLEMSREVPTKEAKAFAESNKISFLETSALNSTNVNQAFETLLTDIFNLVSSKKPVV 181
Query: 186 GDD--------------PAALPKGQTINVGTKDDVSAVKKVGCC 215
DD P + P Q T KK GCC
Sbjct: 182 VDDVQNWLVPNQGKKLTPLSDPAPQLTT--TTASTHQQKKGGCC 223
>gi|145485861|ref|XP_001428938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834601|emb|CAI44716.1| rab_A25 [Paramecium tetraurelia]
gi|124396027|emb|CAK61540.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 159/211 (75%), Gaps = 4/211 (1%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
+ADDDYDYLFK+VL GDSGVGKSNLL RFT+N+F+ +SK+TIGVEFATRSI K+VKA
Sbjct: 3 KADDDYDYLFKIVLSGDSGVGKSNLLLRFTKNQFNADSKTTIGVEFATRSITISGKVVKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAIT+AYYRGA+GA+LVYD+T +FE VE+W++E+R++ D +IVIM++
Sbjct: 63 QIWDTAGQERYRAITAAYYRGAIGAVLVYDITNKQSFEAVEQWIQEVRENADKDIVIMII 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL+HLRA+ TE A+ FME SA + NV+ AF +++ QIY+ ++ K L+
Sbjct: 123 GNKSDLKHLRAIRTESGQDLAQMYKVAFMEASAQDGTNVDQAFIQIIQQIYQNLT-KQLQ 181
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D + L Q+ + + S KK GCC
Sbjct: 182 KYDQMSHL---QSEKLDLEITNSGNKKQGCC 209
>gi|56118662|ref|NP_001007903.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51513190|gb|AAH80339.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271301|emb|CAJ82444.1| RAB25, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 216
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/212 (53%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++++++FKVVLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ D +VK+QI
Sbjct: 5 EEEFNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTLTIDGHLVKSQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAG ERYRAITSAYYRGAVGALLVYD+T+H ++E+V+RWLKEL DH D++IV+MLVGN
Sbjct: 65 WDTAGLERYRAITSAYYRGAVGALLVYDITKHQSYESVDRWLKELYDHADASIVVMLVGN 124
Query: 127 KADLR-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
K DL+ + V +E+A A+AER F+ETSAL++ NVE AF +L IY V + E
Sbjct: 125 KCDLKDEAQEVPSEEAKAYAERNGLLFIETSALDATNVELAFESILRDIYMRVLKSKGET 184
Query: 186 GDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
P+ + + + + +K CC +
Sbjct: 185 -QQPSTINLSKEASPTQSITLVTEQKRSCCQS 215
>gi|392887275|ref|NP_001251691.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
gi|90185954|emb|CAJ85753.1| Protein RAB-11.2, isoform a [Caenorhabditis elegans]
Length = 198
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/174 (63%), Positives = 143/174 (82%), Gaps = 2/174 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++Y YLFK+VLIG+ GVGKSNLLSRFTRNEF+L+SK TIGVEFAT+ I + K VK QIW
Sbjct: 3 NEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIW 62
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAG ER+R S+YYRGA+GALLVYD+++H T+E+VE+WLK LRDH + +IVI LVGNK
Sbjct: 63 DTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNK 122
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
+DL H AV T++A +AER + F+ETSAL++ NVE AFT ++T+IY++VS K
Sbjct: 123 SDLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTEIYKLVSEK 174
>gi|403339931|gb|EJY69227.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 231
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 144/184 (78%), Gaps = 1/184 (0%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD- 59
M A ++YD+LFK+VLIGDSGVGKSNLLSRFT+NEF+LESK+TIGVEFAT+S ++
Sbjct: 1 MSAQHEQEEYDFLFKIVLIGDSGVGKSNLLSRFTKNEFNLESKATIGVEFATKSFSLENG 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
+ VK QIWDTAGQERYRAIT+ YYRGAVGALLVYD+T+ TFE+V+RWL+EL + +S I
Sbjct: 61 QSVKVQIWDTAGQERYRAITNTYYRGAVGALLVYDITKMKTFESVDRWLQELHQYAESGI 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
VI+LVGNK DL LR V E+A FA +N F+ETSAL S NV+ AF ++ QI++ S
Sbjct: 121 VILLVGNKTDLHKLREVKREEAAEFASLKNLAFIETSALVSSNVDEAFDLLIQQIHKEAS 180
Query: 180 RKAL 183
+ +
Sbjct: 181 SRLI 184
>gi|147784781|emb|CAN66526.1| hypothetical protein VITISV_043978 [Vitis vinifera]
Length = 215
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 151/208 (72%), Gaps = 2/208 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFKVV+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 8 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 67
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+++ + MLVGNK+DL
Sbjct: 68 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 127
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R VS E+ + AE E FF+ETSAL+S NV+ AF V+ +IY +SRK L A
Sbjct: 128 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNSDSYKA 187
Query: 191 ALPKGQT--INVGTKDDVSAVKKVGCCS 216
L + ++ G A + CCS
Sbjct: 188 ELSVNRVSLVSNGADGAKQANSRYSCCS 215
>gi|1370160|emb|CAA98186.1| RAB11J [Lotus japonicus]
Length = 223
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 118/223 (52%), Positives = 156/223 (69%), Gaps = 6/223 (2%)
Query: 1 MGAYRADDDY-DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD 59
M Y D+ DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ I +
Sbjct: 1 MAHYNEDEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIDING 60
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
K +KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD++R TF+++ RWL EL H+D N+
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRQTFDSIGRWLNELHTHSDMNV 120
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
V +LVGNK+DL+ R V+T + A AE + FFMETSAL+S NV AF V+ +IY ++S
Sbjct: 121 VTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVAAAFQTVVKEIYNILS 180
Query: 180 RKALEIGD----DPAALPKGQTINV-GTKDDVSAVKKVGCCSN 217
RK + + + + G+++ + G + K GCCS+
Sbjct: 181 RKVMMSQELTKHEVPRIENGKSVVIQGENLEADGQSKKGCCSS 223
>gi|110430656|gb|ABG73446.1| Ras-related protein Rab11B [Oryza brachyantha]
Length = 248
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/222 (54%), Positives = 158/222 (71%), Gaps = 15/222 (6%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+ DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ K VKAQIWD
Sbjct: 26 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQIWD 85
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRA+TSAYYRGA+GA++VYD+TR TFENV RW++ELR H D + V+ L+GNKA
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 145
Query: 129 DLR-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI-- 185
D+ R V+ ++A FAE + FF E SAL NVE AF +L +I+ VVSR+ALE+
Sbjct: 146 DMPASRREVAADEAARFAEEQGLFFSEASALSGDNVERAFLTLLEEIFAVVSRRALELDE 205
Query: 186 -----------GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
G + +L KG T++VG+ + SA+KK CS
Sbjct: 206 ARRMRNGGAGAGGEVLSL-KGTTLDVGSIMETSAMKKSSQCS 246
>gi|218201483|gb|EEC83910.1| hypothetical protein OsI_29960 [Oryza sativa Indica Group]
Length = 407
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/183 (63%), Positives = 139/183 (75%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG + +YLFKVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ D K
Sbjct: 1 MGDESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDIDGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQIWDTAGQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ +
Sbjct: 61 DVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
MLVGNK DL ++R V E+ A AE E FFMETSAL+S NV AF V+ +IY VSR
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSR 180
Query: 181 KAL 183
K L
Sbjct: 181 KIL 183
>gi|148908271|gb|ABR17250.1| unknown [Picea sitchensis]
Length = 214
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 144/211 (68%), Gaps = 1/211 (0%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R ++DYDYLFKV+ GDS VGKSN++SR TRN FS + K T+GVEF +I+ K + A
Sbjct: 4 RCNEDYDYLFKVMFTGDSSVGKSNIISRLTRNYFSHQCKPTVGVEFGIYTIQDKGKTIAA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDT G ERY + T + YRG GA+LVYD+TR TFENV +WLKELRDH +SN VIML+
Sbjct: 64 QIWDTCGLERYASFTKSCYRGVAGAVLVYDITRRRTFENVGKWLKELRDHANSNPVIMLI 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL+HLR+VSTEDA FAE+E FMETSA +S NV+ A +L +I+RV S K L
Sbjct: 124 GNKSDLQHLRSVSTEDAQKFAEKEGLLFMETSAFKSTNVDKALQIILQEIHRVFSEKELH 183
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ + G K + ++ GCC
Sbjct: 184 SEESNGVSTQDGKPTFGAKTRTN-TQRTGCC 213
>gi|255574657|ref|XP_002528238.1| protein with unknown function [Ricinus communis]
gi|223532355|gb|EEF34153.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 117/212 (55%), Positives = 154/212 (72%), Gaps = 7/212 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF++V +WL EL H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSVGKWLNELHTHSDMNVVTILVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE---IGD 187
+ R VST + A AE ++ FFMETSAL+S NV AF V+ +IY ++SRK +
Sbjct: 132 KDAREVSTAEGKALAETQDLFFMETSALDSSNVTAAFQTVVREIYNILSRKVMSNEFNKQ 191
Query: 188 DPAALPKGQTINV---GTKDDVSAVKK-VGCC 215
D + G+T+ + G+++ ++ + GCC
Sbjct: 192 DAPLMGNGKTVVLQGDGSQEAIAEPRNGGGCC 223
>gi|297833530|ref|XP_002884647.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
gi|297330487|gb|EFH60906.1| hypothetical protein ARALYDRAFT_896904 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 148/207 (71%), Gaps = 1/207 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+VLIGDS VGKSNLLSRF+R+EF SK+TIGVEF T+ + + K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GAL+VYD+TR TFE+V+RWL+EL H D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRSDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
+RAVS E+ A AE E FFMETSAL++ NV+ AF V+ +I+ VSRK L A
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSDAYKA 189
Query: 191 ALPKGQTINVGTKD-DVSAVKKVGCCS 216
L + V +D S+ + CCS
Sbjct: 190 ELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|359478027|ref|XP_002264559.2| PREDICTED: ras-related protein RABA5c-like isoform 2 [Vitis
vinifera]
Length = 302
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 151/208 (72%), Gaps = 2/208 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFKVV+IGDS VGKSNLLSR+ RNEF++ SK+TIGVEF T+S+ D K VKAQIWDTA
Sbjct: 95 EYLFKVVIIGDSAVGKSNLLSRYARNEFNINSKATIGVEFQTQSMEIDGKEVKAQIWDTA 154
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++V RWL EL+ H+++ + MLVGNK+DL
Sbjct: 155 GQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVARWLDELKTHSETTVARMLVGNKSDL 214
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R VS E+ + AE E FF+ETSAL+S NV+ AF V+ +IY +SRK L A
Sbjct: 215 ENIRDVSVEEGKSLAEAEGLFFIETSALDSTNVKKAFEIVIREIYNNISRKVLNSDSYKA 274
Query: 191 ALPKGQT--INVGTKDDVSAVKKVGCCS 216
L + ++ G A + CCS
Sbjct: 275 ELSVNRVSLVSNGADGAKQANSRYSCCS 302
>gi|110737235|dbj|BAF00565.1| hypothetical protein [Arabidopsis thaliana]
Length = 229
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 160/224 (71%), Gaps = 18/224 (8%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++R DK +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALL+YD+TR +TF+N+E+WL ELR + V++LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL--- 183
K+DL R V E+ AE E +F+ETSALE+ NVE AF ++ +I+ V+++K +
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQKIVLDN 186
Query: 184 -EIGD-----DPAALPKGQTI-NVGTKDDVSAVKKVG-----CC 215
GD + A +P G+ I N+ +V+A + +G CC
Sbjct: 187 RLNGDGNNESNGAVVPPGKEIVNI---HEVTATRPLGTSLSNCC 227
>gi|115480275|ref|NP_001063731.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|52077324|dbj|BAD46365.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113631964|dbj|BAF25645.1| Os09g0527600 [Oryza sativa Japonica Group]
gi|125564446|gb|EAZ09826.1| hypothetical protein OsI_32116 [Oryza sativa Indica Group]
gi|215767070|dbj|BAG99298.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 239
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 155/220 (70%), Gaps = 12/220 (5%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+ DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRA+TSAYYRGA+GA++VYD+TR TFENV RW++ELR H D + V+ L+GNKA
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 129 DLR-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI-- 185
D+ R V+ ++A FAE + FF E SAL NV+ AF +L +I+ VVSR+ALE+
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 186 ---------GDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
G KG T++VG+ + SA+KK CS
Sbjct: 198 ARRMRDGGAGGGEVLSLKGTTLDVGSIMETSAMKKSSQCS 237
>gi|281212546|gb|EFA86706.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 223
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/220 (52%), Positives = 153/220 (69%), Gaps = 11/220 (5%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++D DYLFK+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI ++K++ AQ
Sbjct: 4 EEDNDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIENKVITAQC 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RA+TS YYRGAVGA++VYD+T V+F+NV RWL ELR+ D +I+IM+VGN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKVSFKNVTRWLNELREMADPDILIMMVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL R VST++A +FA+ F+ETSAL S NV AF +LT IY +K +
Sbjct: 124 KSDLDSAREVSTQEAQSFAQSHKISFLETSALNSSNVNLAFERLLTDIYHHFGQKKQVVM 183
Query: 187 DD-----PAALPKGQTINVGTKDDVSAV------KKVGCC 215
DD + G I + VS+ KK GCC
Sbjct: 184 DDGQEWLKPSTSSGHKITPLAETPVSSTTSTHQEKKKGCC 223
>gi|222640895|gb|EEE69027.1| hypothetical protein OsJ_28001 [Oryza sativa Japonica Group]
Length = 407
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 139/183 (75%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MG + +YLFKVV+IGDS VGKSNLLSR+ RNEF+L SK+TIGVEF T+S+ + K
Sbjct: 1 MGDESEGETEEYLFKVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
VKAQIWDTAGQER+RA+TSAYYRGA GALLVYD++R TF+NV RWL+EL H+D+ +
Sbjct: 61 DVKAQIWDTAGQERFRAVTSAYYRGAFGALLVYDISRRSTFDNVGRWLQELNTHSDTTVA 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
MLVGNK DL ++R V E+ A AE E FFMETSAL+S NV AF V+ +IY VSR
Sbjct: 121 KMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETSALDSTNVRTAFEIVIKEIYSNVSR 180
Query: 181 KAL 183
K L
Sbjct: 181 KIL 183
>gi|21553627|gb|AAM62720.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
Length = 219
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/209 (55%), Positives = 149/209 (71%), Gaps = 2/209 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVE T+++ + K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVELETQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
QER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 CQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
+RAVS E+ A AE E FFMETSAL+S NV+ AF V+ IY +SRK L
Sbjct: 130 ESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQLNSDTYKT 189
Query: 191 ALPKGQTINVGTKDDVSAVKKVG--CCSN 217
L +++ D+ S+ + G CCS+
Sbjct: 190 ELSMKNRVSLVKDDNKSSTQGFGFSCCSS 218
>gi|15231462|ref|NP_187397.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
gi|75337573|sp|Q9SRS5.1|RAA5B_ARATH RecName: Full=Ras-related protein RABA5b; Short=AtRABA5b
gi|6041856|gb|AAF02165.1|AC009853_25 putative GTP-binding protein [Arabidopsis thaliana]
gi|18253019|gb|AAL62436.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|25084141|gb|AAN72184.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332641018|gb|AEE74539.1| RAB GTPase-like protein A5B [Arabidopsis thaliana]
Length = 217
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 148/207 (71%), Gaps = 1/207 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+VLIGDS VGKSNLLSRF+R+EF SK+TIGVEF T+ + + K VKAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GAL+VYD+TR TFE+V+RWL+EL H D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
+RAVS E+ A AE E FFMETSAL++ NV+ AF V+ +I+ VSRK L A
Sbjct: 130 EDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSRKLLNSDAYKA 189
Query: 191 ALPKGQTINVGTKD-DVSAVKKVGCCS 216
L + V +D S+ + CCS
Sbjct: 190 ELSVNRVSLVNNQDGSESSWRNPSCCS 216
>gi|449463200|ref|XP_004149322.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
gi|449507589|ref|XP_004163075.1| PREDICTED: ras-related protein RABA5e-like [Cucumis sativus]
Length = 215
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/215 (58%), Positives = 149/215 (69%), Gaps = 7/215 (3%)
Query: 6 ADDDY---DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A+DD +YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + D K V
Sbjct: 3 ANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEV 62
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQER+RA+TSAYYRGAVGAL+VYD+TR TF++ +RWL EL H D+ V M
Sbjct: 63 KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATVRM 122
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
LVGNK DL ++R VS E+ AE E FFMETSAL+S NV AF V+ +IY VSRK
Sbjct: 123 LVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSRKV 182
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKK-VGCCS 216
L A L + + V D ++ KK CCS
Sbjct: 183 LNSDSYKAELSENR---VSLADGGASSKKGFSCCS 214
>gi|363807622|ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
gi|255641449|gb|ACU21000.1| unknown [Glycine max]
Length = 226
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 154/215 (71%), Gaps = 8/215 (3%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + + K VKAQIWDTA
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGALLVYD++R TF+++ RWL EL H+D N+V +LVGNK+DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---EIG- 186
+ R V+T + A AE + FFMETSAL+S NV AF V+ +IY ++SRK + E+
Sbjct: 132 KDARKVATAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMMSQELNK 191
Query: 187 DDPAALPKGQTINV---GTKD-DVSAVKKVGCCSN 217
D + G+T+ + G D + A K CCS+
Sbjct: 192 QDVTRIENGKTVVLQGEGEGDGEADAQSKKRCCSS 226
>gi|9719734|gb|AAF97836.1|AC034107_19 Contains similarity to ras-related GTP binding protein from Oryza
sativa gb|D13758 and is a member of the Ras PF|00071
family [Arabidopsis thaliana]
Length = 326
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++R DK +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALL+YD+TR +TF+N+E+WL ELR + V++LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V E+ AE E +F+ETSALE+ NVE AF ++ +I+ V+++K
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|47212961|emb|CAF93372.1| unnamed protein product [Tetraodon nigroviridis]
Length = 170
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/168 (64%), Positives = 139/168 (82%), Gaps = 2/168 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+DD Y++++KVVLIG+SGVGKSNLLSRFT+NEF+ +S++TIGVEF+TR+++ + VKAQ
Sbjct: 3 SDDSYNFVYKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNQYTVKAQ 62
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAG ERYRAITSAYYRGAVGALLVYD+++H+T+E+ ERWLKEL +H D +IV+MLVG
Sbjct: 63 IWDTAGLERYRAITSAYYRGAVGALLVYDISKHLTYESTERWLKELYEHADPHIVVMLVG 122
Query: 126 NKADLRHLRAVSTEDATAF--AERENTFFMETSALESMNVENAFTEVL 171
NK DL +LR V +E +E + FMETSAL+S NVE AF EVL
Sbjct: 123 NKRDLENLRTVPSEGGPGLCRSEAKGLMFMETSALDSTNVEAAFNEVL 170
>gi|66818593|ref|XP_642956.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897296|sp|Q550H6.1|RB11C_DICDI RecName: Full=Ras-related protein Rab-11C
gi|60471082|gb|EAL69052.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 224
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 153/224 (68%), Gaps = 18/224 (8%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++ +YLFK+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI D+K + AQ
Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQC 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RA+TS YYRGAVGA++VYD+T ++F+NV RWL ELR+ + +I+IM+VGN
Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K+DL R V T++A AFAE F+ETSAL S NV +F +LT IY +VS K +
Sbjct: 124 KSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVV 183
Query: 187 DD--------------PAALPKGQ-TINVGTKDDVSAVKKVGCC 215
DD P + P Q T N + KK GCC
Sbjct: 184 DDTQNWLVPNQGKKLTPLSDPAPQLTANTTS---THQEKKSGCC 224
>gi|403370738|gb|EJY85236.1| Rab11A, RAB family GTPase [Oxytricha trifallax]
Length = 249
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 156/203 (76%), Gaps = 3/203 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR-CDDKIVKAQ 65
DD+YDYLFK+V++GDSGVGKSNLL R+T+NEF++ S T+G+EFAT++I+ ++I++AQ
Sbjct: 2 DDNYDYLFKLVMLGDSGVGKSNLLMRYTKNEFNVNSTMTMGIEFATKTIQTAQNQIIRAQ 61
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDT GQERYR++TSAYYRGAVGAL+VYDVT +F+NV+ WLKELR +SNIV++LVG
Sbjct: 62 IWDTCGQERYRSLTSAYYRGAVGALMVYDVTSQKSFDNVQVWLKELRQFAESNIVVLLVG 121
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK DL+ R V EDA+ FA+ + F+ETSALE NV+ AF ++ +I+RVV++++ +
Sbjct: 122 NKIDLKDKREVRKEDASQFAQEQGIAFIETSALECSNVDIAFERIIYEIHRVVAQQSTQQ 181
Query: 186 GDDPAALPKGQTIN--VGTKDDV 206
A + + I+ T+DDV
Sbjct: 182 DTQEAEILRQIEISRQQSTQDDV 204
>gi|297740535|emb|CBI30717.3| unnamed protein product [Vitis vinifera]
Length = 154
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/163 (69%), Positives = 126/163 (77%), Gaps = 25/163 (15%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M YRA+DDYDYLFKV SKSTIGVEFATRS+ D K
Sbjct: 1 MAGYRAEDDYDYLFKV-------------------------SKSTIGVEFATRSLNVDGK 35
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
++KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRH TFENVERWL+ELRDHTD NIV
Sbjct: 36 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 95
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNV 163
+ML+GNK+DLRHL AVSTED +FAERE+ +FMETSALE+ N+
Sbjct: 96 VMLIGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNL 138
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 153/209 (73%), Gaps = 4/209 (1%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+ DYL K+VLIGDSGVGK+NLL+RFTR++F+ ESKSTIGVEFA+++++ + K +KAQIWD
Sbjct: 5 EPDYLLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWD 64
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGA+GALL+YD+T +TF ++E+WLKELR++ D I++MLVGNK
Sbjct: 65 TAGQERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENADEKIIVMLVGNKC 124
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--ALEIG 186
DL RAV++ +A FA+ +N F+ETSA E+ NV AF ++ +I ++++ A E
Sbjct: 125 DLSEQRAVTSANALEFAKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNVAAEEK 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ P+ TK KK GCC
Sbjct: 185 ANVQETPRQGVSITATKSPEE--KKKGCC 211
>gi|30677910|ref|NP_171628.2| Rab family protein [Arabidopsis thaliana]
gi|75174997|sp|Q9LNK1.1|RABA3_ARATH RecName: Full=Ras-related protein RABA3; Short=AtRABA3
gi|9665141|gb|AAF97325.1|AC023628_6 Putative GTP-binding protein [Arabidopsis thaliana]
gi|38454140|gb|AAR20764.1| At1g01200 [Arabidopsis thaliana]
gi|38604028|gb|AAR24757.1| At1g01200 [Arabidopsis thaliana]
gi|332189132|gb|AEE27253.1| Rab family protein [Arabidopsis thaliana]
Length = 237
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 152/211 (72%), Gaps = 5/211 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVV+IGDS VGK+ LLSRFT NEF +SKSTIGVEF TR+I K+VKAQIWDTA
Sbjct: 26 DYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTA 85
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA++VYD+T+ ++F++V RW++ELR H D + VIMLVGNKADL
Sbjct: 86 GQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNKADL 145
Query: 131 R-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR--VVSRKALEIGD 187
RAV TEDA FAE + FF E SAL NV+ AF +L +I+ VVSRKA+E
Sbjct: 146 SVGKRAVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAMESDG 205
Query: 188 DPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
G I+V G+ + S +K+ CS
Sbjct: 206 GATVKLDGSRIDVISGSDLETSNIKEQASCS 236
>gi|289370|gb|AAA68983.1| small GTP-binding protein [Brassica napus]
Length = 219
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/173 (64%), Positives = 136/173 (78%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF+ SK+TIGVEF T+S+ + K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQSMEIEGKDVKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TFE+V RWL EL+ H+D+ + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRSTFESVARWLDELKTHSDTTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
++RAVS E+ A AE + FFMETSAL S NV+ AF V+ IY SRK L
Sbjct: 130 DNMRAVSVEEGKALAETQGLFFMETSALNSTNVKTAFEMVIRDIYANFSRKQL 182
>gi|322694053|gb|EFY85893.1| GTP-binding protein ypt3 [Metarhizium acridum CQMa 102]
Length = 264
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 126/144 (87%)
Query: 29 LLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVG 88
L SRFTRNEF+L+SKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVG
Sbjct: 35 LQSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQERYRAITSAYYRGAVG 94
Query: 89 ALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERE 148
ALLVYD+++H T+ENV RWLKELRDH D+NIVIMLVGNK+DLRHLRAV T++A +FA
Sbjct: 95 ALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSDLRHLRAVPTDEAKSFASEN 154
Query: 149 NTFFMETSALESMNVENAFTEVLT 172
+ F+ETSAL++ NVE AF +LT
Sbjct: 155 HLSFIETSALDASNVELAFQNILT 178
>gi|357504951|ref|XP_003622764.1| Ras-related protein ARA-1 [Medicago truncatula]
gi|355497779|gb|AES78982.1| Ras-related protein ARA-1 [Medicago truncatula]
Length = 215
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 145/208 (69%), Gaps = 7/208 (3%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAG 71
YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + D K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQMVEIDGKEVKAQIWDTAG 71
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
QER+RA+TSAYYRGA GAL+VYD++R TFE+++RWL EL DS + MLVGNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 132 HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAA 191
++R VS E+ A AE E FFMETSAL+S NV+ AF V+ +IY +SRK L A
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNSDSYKAE 191
Query: 192 LPKGQTINVGTKDDVSAVKK---VGCCS 216
L ++N T + S KK CCS
Sbjct: 192 L----SVNRVTLVNGSGSKKNMFSSCCS 215
>gi|359806412|ref|NP_001240985.1| ras-related protein RABA5b-like [Glycine max]
gi|345651732|gb|AEO14876.1| rfls8 protein [Glycine max]
Length = 213
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 146/206 (70%), Gaps = 3/206 (1%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + D K +KAQIWDTA
Sbjct: 10 EYLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQLVEIDGKEIKAQIWDTA 69
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD++R TF++++RWL+EL DS + MLVGNK DL
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRGTFDSIKRWLQELTTQNDSTVARMLVGNKCDL 129
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R VSTE+ + AE E FFMETSAL++ NV+ AF V+ +IY +SRK L A
Sbjct: 130 ENIREVSTEEGKSLAEEEGLFFMETSALDATNVQTAFEIVIREIYNNISRKVLNSDSYKA 189
Query: 191 ALPKGQTINVGTKDDVSAVKKVGCCS 216
L + V + + + CCS
Sbjct: 190 ELSVNR---VSLVNGAGSKQGPSCCS 212
>gi|225467903|ref|XP_002263362.1| PREDICTED: ras-related protein RABA5e-like [Vitis vinifera]
gi|147834571|emb|CAN69655.1| hypothetical protein VITISV_000615 [Vitis vinifera]
gi|296080913|emb|CBI18743.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/208 (56%), Positives = 145/208 (69%), Gaps = 2/208 (0%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF L SK+TIGVEF T+ + D K VKAQIWDTA
Sbjct: 7 EYLFKIVIIGDSAVGKSNLLSRYARNEFDLHSKATIGVEFQTQCVDIDGKEVKAQIWDTA 66
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGA GALLVYD++R TFE++ RWL EL+ H D+ + MLVGNK DL
Sbjct: 67 GQERFRAVTSAYYRGAFGALLVYDISRRSTFESIARWLDELKIHCDTTVARMLVGNKCDL 126
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R VSTE+ AE E FFMETSAL++ NV+ AF V+ +I+ VSRK L A
Sbjct: 127 ENIRDVSTEEGKNLAEAEGLFFMETSALDATNVKTAFEMVIREIFNNVSRKVLHSDSYKA 186
Query: 191 ALPKGQTINVGTKDDVSAVKKV--GCCS 216
L + V S ++ CCS
Sbjct: 187 ELSVNRVSLVNNGAAASKQNQIYSSCCS 214
>gi|145335857|ref|NP_173258.2| RAB GTPase homolog A6B [Arabidopsis thaliana]
gi|332320574|sp|Q0WQN4.2|RAA6B_ARATH RecName: Full=Ras-related protein RABA6b; Short=AtRABA6b
gi|332191565|gb|AEE29686.1| RAB GTPase homolog A6B [Arabidopsis thaliana]
Length = 229
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 139/175 (79%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++R DK +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALL+YD+TR +TF+N+E+WL ELR + V++LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGN 126
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V E+ AE E +F+ETSALE+ NVE AF ++ +I+ V+++K
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|255584671|ref|XP_002533058.1| protein with unknown function [Ricinus communis]
gi|223527156|gb|EEF29328.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 144/206 (69%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
+YLFK+VLIGDS VGKSNLL+RF RNEF SK+TIGVEF T+ + + K +KAQIWDTA
Sbjct: 12 EYLFKIVLIGDSAVGKSNLLARFARNEFDSNSKATIGVEFQTQVVDIEGKEIKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQER+RA+TSAYYRGAVGAL+VYD+TR +F++V+RWL+EL H D+ MLVGNK DL
Sbjct: 72 GQERFRAVTSAYYRGAVGALIVYDITRRSSFDSVKRWLEELSTHCDTTAARMLVGNKCDL 131
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA 190
++R VS E+ AE E+ FFMETSAL+S NVE AF V+ +IY +SRK L A
Sbjct: 132 ENIREVSREEGKTLAEEESLFFMETSALDSTNVEAAFEVVIREIYHNMSRKTLNSDSYKA 191
Query: 191 ALPKGQTINVGTKDDVSAVKKVGCCS 216
L + V + S CC+
Sbjct: 192 ELTVNRVSLVKNNANSSKQSSFSCCA 217
>gi|307777776|dbj|BAJ21284.1| Rab-family small GTPase Rab11C [Tetrahymena thermophila]
Length = 221
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 139/175 (79%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M + +D YD+LFK+VLIGDSGVGKS L+SRFT+++FS+E + TIGVEF+T++I+ DK
Sbjct: 1 MQRNQEEDVYDFLFKIVLIGDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
I+KAQIWDTAGQERYRAITSAYYRGA GAL+V+D+T+ +FEN+ +W KEL++H+D IV
Sbjct: 61 IIKAQIWDTAGQERYRAITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
ML+GNK DL R +S + A+ FA+ + ++ETSAL S NVE AF +++ IY
Sbjct: 121 TMLIGNKCDLADQRNISKDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 175
>gi|156406695|ref|XP_001641180.1| predicted protein [Nematostella vectensis]
gi|156228318|gb|EDO49117.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 138/193 (71%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQ 65
+D+YDYLFK+VLIGDSGVGKSNLLSR+T+NEF L SK+TIGVE A R++ + K V+AQ
Sbjct: 11 PEDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQ 70
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGA+GA+LVYD+ + +F N+ +W++ELR H ++ I+L+G
Sbjct: 71 IWDTAGQERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIG 130
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL+HLR + FA FMETSAL+S NV AF + I+ V + LE
Sbjct: 131 NKSDLKHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEK 190
Query: 186 GDDPAALPKGQTI 198
P G++I
Sbjct: 191 SGQAHEKPNGESI 203
>gi|145534648|ref|XP_001453068.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833730|emb|CAI39337.1| rab_C74 [Paramecium tetraurelia]
gi|124420768|emb|CAK85671.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/213 (50%), Positives = 149/213 (69%), Gaps = 9/213 (4%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D+DYDYLFK+VLIGDSGVGK+N+L RF NEF LESK TIGVEFAT++ + K VK QI
Sbjct: 6 DEDYDYLFKIVLIGDSGVGKTNILKRFINNEFQLESKPTIGVEFATKTFQQQGKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAIT+AYYRGAVGA + YD+TR +TF+N E+WL EL++H D NIVI+++GN
Sbjct: 66 WDTAGQERFRAITNAYYRGAVGAFICYDITREITFKNTEKWLSELKEHADGNIVIIMIGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS----RKA 182
K D RAV T++A + E + F+ETSAL+ N++ AF +++ I+ + +K
Sbjct: 126 KIDAVDSRAVRTDEAQDYCESQKIGFIETSALDGTNIDVAFNKIVANIFNTIGSKNIKKV 185
Query: 183 LEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+++ + L K + +K + + GCC
Sbjct: 186 VQMATEQVLLEKPKVTQSKSKKN-----REGCC 213
>gi|440903633|gb|ELR54270.1| Ras-related protein Rab-25, partial [Bos grunniens mutus]
Length = 199
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/208 (57%), Positives = 147/208 (70%), Gaps = 20/208 (9%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSRE 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--------ALEIGD 187
V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ A+ +G
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQNNARTNAVTLGS 180
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCC 215
PA GQ + G +K CC
Sbjct: 181 GPA----GQELGPG--------EKRACC 196
>gi|167381877|ref|XP_001735893.1| rab11 [Entamoeba dispar SAW760]
gi|165901950|gb|EDR27906.1| rab11, putative [Entamoeba dispar SAW760]
Length = 211
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 150/209 (71%), Gaps = 3/209 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++YD+L+K+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATRSI DK ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +FE+VE+WL EL ++ D +V M++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA-LEIG 186
DL R V T + A++ N FF ETSAL+ NVE AF +L +IY S+ E
Sbjct: 125 CDLNQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKSVDGEQS 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ P + I++G++++ KK CC
Sbjct: 185 SNNEIKPATEPIDLGSQNNKPEEKK--CC 211
>gi|357117593|ref|XP_003560549.1| PREDICTED: ras-related protein RABA3-like [Brachypodium distachyon]
Length = 233
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 138/179 (77%), Gaps = 4/179 (2%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVV+IGDSGVGK+ LL RFTR+EF L+SKSTIG+EF TR++ K VKAQIWDTA
Sbjct: 12 DYVFKVVVIGDSGVGKTQLLGRFTRDEFCLDSKSTIGIEFQTRTVLLAGKRVKAQIWDTA 71
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYDVTR +FE+ RW+ ELR H D +IV++L+GNKADL
Sbjct: 72 GQERYRAVTSAYYRGALGAMLVYDVTRRDSFEHAARWVAELRAHADKSIVVVLIGNKADL 131
Query: 131 R----HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
RAV E+ATAFAE + FF E SAL NVE AF +L +I+ VSR+ LE+
Sbjct: 132 AVAAVGRRAVDVEEATAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRRPLEV 190
>gi|297839229|ref|XP_002887496.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
gi|297333337|gb|EFH63755.1| hypothetical protein ARALYDRAFT_476500 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 141/180 (78%), Gaps = 4/180 (2%)
Query: 6 ADDDY----DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKI 61
A+D Y DYLFK VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R++ DKI
Sbjct: 2 AEDSYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKI 61
Query: 62 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVI 121
+KAQIWDTAGQER+RAITS+YYRGA+GALL+YD+TR TF+N+++WL ELRD + V+
Sbjct: 62 IKAQIWDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVV 121
Query: 122 MLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
+LVGNK+DLR R V ++ AE E FF+ETSALE++NVE AF ++ +I+ VV+++
Sbjct: 122 VLVGNKSDLRQSREVEEDEGKTLAESEGLFFLETSALENVNVEEAFLVMIGRIHEVVTQR 181
>gi|15219515|ref|NP_177505.1| RAB GTPase A6a [Arabidopsis thaliana]
gi|75333591|sp|Q9C9U7.1|RAA6A_ARATH RecName: Full=Ras-related protein RABA6a; Short=AtRABA6a
gi|12324223|gb|AAG52089.1|AC012679_27 putative ras-related GTP-binding protein; 14977-15931 [Arabidopsis
thaliana]
gi|21537030|gb|AAM61371.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332197367|gb|AEE35488.1| RAB GTPase A6a [Arabidopsis thaliana]
Length = 233
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 159/225 (70%), Gaps = 16/225 (7%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++ DYLFK VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R++ DKI+KAQI
Sbjct: 7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQI 66
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALL+YD+TR TF+N+++WL ELRD + V++LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGN 126
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK-ALEI 185
K+DLR R V ++ AE E +F+ETSALE++NVE AF ++ +I+ VV+++ A E
Sbjct: 127 KSDLRQSREVEEDEGKTLAESEGLYFLETSALENVNVEEAFLVMIGRIHEVVTQRIASEN 186
Query: 186 GDDPAALP------KGQTINVGTK----DDVSAVKKV-----GCC 215
+ AA P G + VG + +V+A + + CC
Sbjct: 187 KSNGAATPHINGNGNGTVLPVGKEIVNIHEVTATQPLLSSSSNCC 231
>gi|67474054|ref|XP_652776.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|13537447|dbj|BAB40678.1| small GTPase Rab11B [Entamoeba histolytica]
gi|56469662|gb|EAL47390.1| small GTPase Rab11B [Entamoeba histolytica HM-1:IMSS]
gi|449709813|gb|EMD49007.1| small GTPase Rab11B, putative [Entamoeba histolytica KU27]
Length = 211
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 150/209 (71%), Gaps = 3/209 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++YD+L+K+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATRSI DK ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +FE+VE+WL EL ++ D +V M++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA-LEIG 186
DL R V T + A++ N FF ETSAL+ NVE AF +L +IY S+ E
Sbjct: 125 CDLSQTREVQTSEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKSVDGEQS 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ P + I++G++++ KK CC
Sbjct: 185 NTNEIKPATEPIDLGSQNNKPEEKK--CC 211
>gi|168048429|ref|XP_001776669.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162671961|gb|EDQ58505.1| Rab11/RabA-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 161
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/161 (68%), Positives = 129/161 (80%), Gaps = 1/161 (0%)
Query: 56 RCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT 115
+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+HVT+ENVERWLKELRDH
Sbjct: 1 QVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHA 60
Query: 116 DSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DSNIVIMLVGNK+DL+HLR VST+DA AF+E+E F+ETSALES NVE AF +LT+IY
Sbjct: 61 DSNIVIMLVGNKSDLKHLRGVSTDDAQAFSEKEGLSFIETSALESTNVEKAFQRILTEIY 120
Query: 176 RVVSRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
R+VS+KAL ++ P GQ N+ D + K GCCS
Sbjct: 121 RIVSKKALASEENTTEGP-GQGTNIVPLDSNAPDLKKGCCS 160
>gi|399217959|emb|CCF74846.1| unnamed protein product [Babesia microti strain RI]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 143/197 (72%), Gaps = 2/197 (1%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRS-IRCDDKIVKA 64
+DD YDYL+K+VLIGDS VGKSNLL+R+T+NEF+LESKSTIGVEFAT + I + K+ K
Sbjct: 3 SDDSYDYLYKIVLIGDSNVGKSNLLTRYTKNEFNLESKSTIGVEFATNAHILKNGKVCKV 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGAVGAL+ YD+T +FENV+RWLKELRD+ + VI LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGALICYDITSRSSFENVKRWLKELRDYAPPHSVICLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA-L 183
GNK D+ +LR V+ ++ A EN F+E SAL+S NV AF E++ IY ++
Sbjct: 123 GNKVDMVNLRQVTKDEGAKLARLENILFLECSALDSTNVNAAFAELIETIYTTQAKTTNY 182
Query: 184 EIGDDPAALPKGQTINV 200
E D LP IN+
Sbjct: 183 EGMDTSQQLPTCVGINL 199
>gi|407043806|gb|EKE42164.1| small GTPase Rab11B, putative [Entamoeba nuttalli P19]
Length = 211
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 150/209 (71%), Gaps = 3/209 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++YD+L+K+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATRSI DK ++AQIW
Sbjct: 5 EEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSINYCDKNIRAQIW 64
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +FE+VE+WL EL ++ D +V M++GNK
Sbjct: 65 DTAGQERYRAITNAYYRGALGALVVYDITKKTSFESVEKWLAELHENADKKVVQMVIGNK 124
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA-LEIG 186
DL R V T + A++ N FF ETSAL+ NVE AF +L +IY S+ E
Sbjct: 125 CDLSQTREVQTTEGEELAKKNNAFFFETSALDGSNVEEAFMTLLKKIYDDSSKSVDGEQS 184
Query: 187 DDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ P + I++G++++ KK CC
Sbjct: 185 NTNEIKPATEPIDLGSQNNKPEEKK--CC 211
>gi|297850210|ref|XP_002892986.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338828|gb|EFH69245.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 138/175 (78%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++R DK +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALL+YD+TR +TF+N+ +WL ELR + V++LVGN
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRITFKNIGKWLSELRGFSSPETVVVLVGN 126
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K+DL R V E+ AE E +F+ETSALE+ NVE AF ++ +I+ V+++K
Sbjct: 127 KSDLGQSREVEEEEGKTLAESEGLYFLETSALENQNVEEAFLSMIGRIHEVLTQK 181
>gi|388494812|gb|AFK35472.1| unknown [Medicago truncatula]
Length = 215
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 144/208 (69%), Gaps = 7/208 (3%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAG 71
YLFK+VLIGDS VGKSNLLSRF RNEF SK+TIGVE T+ + D K VKAQIWDTAG
Sbjct: 12 YLFKIVLIGDSAVGKSNLLSRFARNEFDSNSKATIGVELQTQMVEIDGKEVKAQIWDTAG 71
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
QER+RA+TSAYYRGA GAL+VYD++R TFE+++RWL EL DS + MLVGNK DL
Sbjct: 72 QERFRAVTSAYYRGAFGALVVYDISRRGTFESIKRWLDELTTQNDSTVARMLVGNKCDLE 131
Query: 132 HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAA 191
++R VS E+ A AE E FFMETSAL+S NV+ AF V+ +IY +SRK L A
Sbjct: 132 NIREVSIEEGKALAEEEGLFFMETSALDSTNVQTAFEIVIREIYNNISRKVLNFDSYKAE 191
Query: 192 LPKGQTINV---GTKDDVSAVKKVGCCS 216
L + V G+K ++ + CCS
Sbjct: 192 LFVNRVTLVNGFGSKKNMFS----SCCS 215
>gi|242006346|ref|XP_002424012.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507304|gb|EEB11274.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 130
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/121 (87%), Positives = 115/121 (95%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D NIVIMLVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGN 124
Query: 127 K 127
K
Sbjct: 125 K 125
>gi|148683326|gb|EDL15273.1| RAB25, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 235
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/201 (58%), Positives = 145/201 (72%), Gaps = 4/201 (1%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQER 74
+VVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQIWDTAG ER
Sbjct: 36 RVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 95
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
YRAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R
Sbjct: 96 YRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAR 155
Query: 135 AVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAALPK 194
V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++ + +A+
Sbjct: 156 EVPTEEACMFAENNGLLFLETSALDSTNVELAFQTVLKEIFAKVSKQK-QNSTRTSAITL 214
Query: 195 GQTINVGTKDDVSAVKKVGCC 215
G N D +K CC
Sbjct: 215 G---NAQAGQDPGPGEKRACC 232
>gi|222641954|gb|EEE70086.1| hypothetical protein OsJ_30082 [Oryza sativa Japonica Group]
Length = 260
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 152/215 (70%), Gaps = 12/215 (5%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+ DY+FKVV++GDS VGK+ LL RFT++EF L+SKSTIGVEF TR++ K VKAQIWD
Sbjct: 18 EIDYVFKVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWD 77
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRA+TSAYYRGA+GA++VYD+TR TFENV RW++ELR H D + V+ L+GNKA
Sbjct: 78 TAGQERYRAVTSAYYRGALGAMVVYDITRRRTFENVARWVEELRAHADGSTVVALIGNKA 137
Query: 129 DLRH-LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI-- 185
D+ R V+ ++A FAE + FF E SAL NV+ AF +L +I+ VVSR+ALE+
Sbjct: 138 DMPAGRREVAADEAARFAEEQGLFFSEASALSGDNVDRAFLTLLEEIFAVVSRRALELDE 197
Query: 186 ---------GDDPAALPKGQTINVGTKDDVSAVKK 211
G KG T+N G+ + SA+KK
Sbjct: 198 ARRMRDGGAGGVQVLSLKGTTLNFGSIMETSAMKK 232
>gi|46193751|emb|CAG25544.1| putative Ras-related GTP-binding protein [Cucumis sativus]
Length = 203
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 147/203 (72%), Gaps = 4/203 (1%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYR 76
VL GDSGVGKSNLLSRF++NEF +S+ TIGVEFA R+I+ DK+VK QIWDTAGQER+R
Sbjct: 1 VLTGDSGVGKSNLLSRFSKNEFRFDSRPTIGVEFAYRNIKVADKLVKTQIWDTAGQERFR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 136
AITS+YYRGA+GALLVYD+TR TF+N+++WL+ELR+ + +VI+LVGNK DL R V
Sbjct: 61 AITSSYYRGALGALLVYDITRVATFDNIKKWLRELREFGNPEMVIILVGNKCDLHQSREV 120
Query: 137 STEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG---DDPAALP 193
E+A AE EN FFMETSA +++NVE AF E++ +I+ + S+K L++ + A P
Sbjct: 121 QEEEARHLAELENLFFMETSAKDNLNVEEAFLEMVRRIHAIASQKTLDLHKKFEKLVAFP 180
Query: 194 KGQTINVGTKDDVSAVKKVGCCS 216
G+ I + + CCS
Sbjct: 181 NGKEI-ISIHEVTPTKPNSNCCS 202
>gi|356531156|ref|XP_003534144.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA6a-like
[Glycine max]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 160/214 (74%), Gaps = 7/214 (3%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR-CDDKIVKAQ 65
D+ DYLFKV IG+SGVGKSNL+SRF ++EF L+SK +IGVEFA +I+ DK++KAQ
Sbjct: 8 DEHCDYLFKVX-IGESGVGKSNLISRFAKDEFRLDSKPSIGVEFAYGNIKLVRDKLIKAQ 66
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQER+RAITS+YYRGA+GA+LVYD+T+ TF NV +WL ELR+ ++V++LV
Sbjct: 67 IWDTAGQERFRAITSSYYRGALGAMLVYDITKRATFVNVGKWLHELREFGGEDMVVVLVR 126
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
NK+DL R V E FAE E FMETSAL+++NV+ AF E++T+I+ ++S+K+LE
Sbjct: 127 NKSDLDQSRQVEREKGKGFAETEGLCFMETSALQNLNVDEAFXEMITKIHDIISQKSLET 186
Query: 186 GDDPAA--LPKGQTINVGTKDDVSAVKKVG-CCS 216
+ AA LP G+ I++ D+V+A K+ CCS
Sbjct: 187 KMNGAALNLPSGKEIHIA--DEVTATKQAKYCCS 218
>gi|19920111|gb|AAM08543.1|AC079935_15 Putative Ras-related protein Rab [Oryza sativa Japonica Group]
Length = 202
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 146/210 (69%), Gaps = 19/210 (9%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+RF RNEFS++SK+TIGVEF TR++ D K
Sbjct: 8 DYVFKVVLIGDSAVGKSQILARFARNEFSIDSKATIGVEFQTRTLLIDHK---------- 57
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
YRA+TSAYYRGA+GALLVYD+T+ +F+++ RWL+ELR H D NIVIMLVGNK+DL
Sbjct: 58 ----YRAVTSAYYRGALGALLVYDITKRQSFDHIPRWLEELRGHADKNIVIMLVGNKSDL 113
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP- 189
RAVSTEDA FAE+EN FF+ETSAL++ NVENAF VL++I+++ S+K + DP
Sbjct: 114 EDERAVSTEDAKEFAEKENLFFLETSALQATNVENAFQTVLSEIFKIHSKK--NMAADPK 171
Query: 190 --AALPKGQTINVGTKDDVSAVKKVGCCSN 217
A P V + K CCS+
Sbjct: 172 ANGAAPSLAGKKVVVPGPAQEIPKSKCCSS 201
>gi|440301486|gb|ELP93872.1| rab11, putative [Entamoeba invadens IP1]
Length = 213
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 154/214 (71%), Gaps = 3/214 (1%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A +D+YD+L+K+VL+G+SGVGKSNLL RFTRNEF + +STIGVEFATRSI +K +
Sbjct: 2 ANTGEDEYDFLYKIVLVGESGVGKSNLLLRFTRNEFDPDKRSTIGVEFATRSIVYHEKNI 61
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
+AQIWDTAGQERYRAIT+AYYRGA+GAL+VYD+T+ +FE+VERWL EL ++ D ++ M
Sbjct: 62 RAQIWDTAGQERYRAITNAYYRGALGALVVYDITKKSSFESVERWLNELHENADRKVLQM 121
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
++GNK+DL R V+TE+ AE FF ETSAL+ NVE+AF +L +IY ++
Sbjct: 122 IIGNKSDLNQTREVTTEEGKKLAEDNKAFFFETSALDGNNVEDAFMTLLKKIYDESAKVV 181
Query: 183 L-EIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ E+ + A P T+ + ++ + K+ CC
Sbjct: 182 VDEVKTE--AKPTADTVVLTHEEPKATEKQQKCC 213
>gi|224069898|ref|XP_002303077.1| predicted protein [Populus trichocarpa]
gi|222844803|gb|EEE82350.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/205 (56%), Positives = 144/205 (70%), Gaps = 1/205 (0%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAG 71
YLFK+V+IGDS VGKSNLLSRF RNEF SK+TIGVEF T+ + D K +KAQIWDTAG
Sbjct: 14 YLFKIVVIGDSAVGKSNLLSRFARNEFDSNSKATIGVEFQTQVVDIDGKEIKAQIWDTAG 73
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
QER+RA+TSAYYRGAVGAL+VYD+TR +F++V+RWL EL H D+ I MLVGNK DL
Sbjct: 74 QERFRAVTSAYYRGAVGALIVYDITRRTSFDSVKRWLDELGTHCDTAIARMLVGNKCDLD 133
Query: 132 HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPAA 191
+R VS ++ + AE E+ FFMETSAL+S NVE AF V+ +IY +SRK L D A
Sbjct: 134 SIREVSRDEGKSLAEEESLFFMETSALDSTNVEAAFEVVIREIYNNMSRKILN-SDSYKA 192
Query: 192 LPKGQTINVGTKDDVSAVKKVGCCS 216
+++ D S CC+
Sbjct: 193 ELTANRVSLVNGDTSSKKYGFSCCN 217
>gi|281342890|gb|EFB18474.1| hypothetical protein PANDA_016684 [Ailuropoda melanoleuca]
Length = 199
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 134/166 (80%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL+ R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFTKVSKQ 166
>gi|268567488|ref|XP_002647794.1| Hypothetical protein CBG23562 [Caenorhabditis briggsae]
Length = 153
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 127/148 (85%), Gaps = 1/148 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++YDYLFKVVL+GDSGVGKSNLLSRFTRN F LE+KSTIGVEFATRS+ + K +KA I
Sbjct: 6 DEEYDYLFKVVLVGDSGVGKSNLLSRFTRNTFDLETKSTIGVEFATRSMMIEGKKIKATI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-SNIVIMLVG 125
WDTAGQERYRAIT AYYRGA+G L+VYD+ +H TF+N+++WLKELR+H D SNI IMLVG
Sbjct: 66 WDTAGQERYRAITPAYYRGALGILIVYDIAKHQTFQNIDQWLKELRNHADESNISIMLVG 125
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFM 153
NK DLRHLRAV T++A +A+R + F+
Sbjct: 126 NKTDLRHLRAVPTQEAAIYADRNHMSFI 153
>gi|351696645|gb|EHA99563.1| Ras-related protein Rab-25 [Heterocephalus glaber]
Length = 212
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 149/214 (69%), Gaps = 7/214 (3%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
RA++DY+++FKVVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ +KA
Sbjct: 4 RAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKA 63
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAG E YR T YYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLV
Sbjct: 64 QIWDTAGLELYRG-TRRYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL R V T++A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 123 GNKSDLSQAREVPTDEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQRQN 182
Query: 185 IGDD-PAALPKGQTINVGTKDDVSAVKKVGCCSN 217
P L Q D S +K CC N
Sbjct: 183 STRSIPITLGNAQ-----AGQDPSPGEKRPCCIN 211
>gi|1619855|gb|AAB16973.1| rab11-like, partial [Caenorhabditis elegans]
Length = 127
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 113/123 (91%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSI + K VKAQI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAITSAYYRGAVGALLVYD+ +HVT+ENVERWLKELRDH D NIVIM VGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGN 124
Query: 127 KAD 129
K D
Sbjct: 125 KCD 127
>gi|156086346|ref|XP_001610582.1| ras-related protein Rab11A [Babesia bovis T2Bo]
gi|154797835|gb|EDO07014.1| ras-related protein Rab11A [Babesia bovis]
Length = 212
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/170 (64%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKA 64
AD YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ ++ KI KA
Sbjct: 3 ADQSYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKTVTLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ +F NV +WL EL D+ DSNI I LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKTSFTNVSKWLTELHDYADSNITICLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
GNK+DL HLR V+ ED AFA + F ETS L S NV+ AF E+L++I
Sbjct: 123 GNKSDLTHLREVNKEDGEAFARENDLLFFETSCLNSENVDVAFKELLSKI 172
>gi|145504587|ref|XP_001438260.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831454|emb|CAI39309.1| rab_C29 [Paramecium tetraurelia]
gi|124405432|emb|CAK70863.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 141/172 (81%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAG 71
+LFK+VLIGDS VGKSN+LSRFT+ +F+ +S+ TIGVEFATRS+ + KI++AQIWDT G
Sbjct: 11 HLFKIVLIGDSSVGKSNILSRFTKRQFNFDSQPTIGVEFATRSLTENGKIIQAQIWDTCG 70
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
QERY++ITSAYYRGAVGA+L+YD+T+ TFEN+E+W++EL+++ ++N+V ML+GNKADL+
Sbjct: 71 QERYKSITSAYYRGAVGAMLIYDITKQKTFENIEKWIQELKEYAETNVVAMLIGNKADLK 130
Query: 132 HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
R V ++ A FAE FME SA + NV+ AF+ ++ +IY+++++++L
Sbjct: 131 AQRKVPSDKAAQFAENHTMAFMEVSAFDGTNVDLAFSRLINEIYQLINKQSL 182
>gi|357521613|ref|XP_003631095.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355525117|gb|AET05571.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 265
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/208 (55%), Positives = 156/208 (75%), Gaps = 5/208 (2%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
D++ DYLFK VLIGDSGVGKSNLLSRF ++EF L+SK TIGVEFA R+I+ DK++KAQI
Sbjct: 8 DEECDYLFKAVLIGDSGVGKSNLLSRFAKDEFRLDSKPTIGVEFAYRNIKVRDKLIKAQI 67
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RAITS+YYRGA+GALLVYD+TR ++E+V RWL ELR+ +V++LVGN
Sbjct: 68 WDTAGQERFRAITSSYYRGALGALLVYDITRRSSYESVGRWLVELREFGGEEMVVILVGN 127
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL R V E+A FAE E FMETSAL+++NVE F +++T I+ + ++++L+
Sbjct: 128 KCDLGESREVEEEEAKRFAEAEGLCFMETSALKNLNVEQVFLQMITTIFDITNQRSLDAK 187
Query: 187 DDPAA---LPKGQTINVGTKDDVSAVKK 211
D L G+ I++ D+V+A K+
Sbjct: 188 MDETPINHLSNGKEIHIA--DEVTATKQ 213
>gi|167384417|ref|XP_001736944.1| rab11 [Entamoeba dispar SAW760]
gi|165900524|gb|EDR26832.1| rab11, putative [Entamoeba dispar SAW760]
Length = 213
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/167 (61%), Positives = 133/167 (79%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
DDYDYL+KVV+IGDSGVGKSNLL RFTR+EF E KSTIGVEF+++ IR +D+ V+ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GA+LVYDVT+ +FE+++RWL ELRD+ D +V M+VGNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
DL +R V+ ++ A++ FF ETSAL+ NVE AF ++ +I
Sbjct: 124 CDLEQMREVTIKEGEDMAKKIGAFFFETSALDGKNVETAFMAIIQKI 170
>gi|149048127|gb|EDM00703.1| RAB25, member RAS oncogene family (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 199
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/166 (65%), Positives = 133/166 (80%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
+VLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQIWDTAG ERY
Sbjct: 1 MVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
V TE+A FAE F+ETSAL+S NVE AF VL +I+ VS++
Sbjct: 121 VPTEEACMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 166
>gi|223941192|dbj|BAH23088.1| small GTP binding protein Rab11 [Babesia bigemina]
Length = 211
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/192 (58%), Positives = 139/192 (72%), Gaps = 5/192 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKA 64
AD +YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ ++ KI KA
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ +F +V +WL EL D+ D+NI I LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIIVYDIACKASFSSVSKWLTELHDYADANITICLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DL HLR V+ ED AFA + F ETS L S NV+ AF E+L++I S K
Sbjct: 123 GNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSKI----SDKNTR 178
Query: 185 IGDDPAALPKGQ 196
D A+L Q
Sbjct: 179 FDDGGASLTDAQ 190
>gi|67473696|ref|XP_652598.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469466|gb|EAL47212.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790052|dbj|BAD82822.1| small GTPase EhRab11D [Entamoeba histolytica]
gi|407040023|gb|EKE39941.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449703380|gb|EMD43841.1| small GTPase EhRab11D, putative [Entamoeba histolytica KU27]
Length = 213
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/167 (61%), Positives = 132/167 (79%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
DDYDYL+KVV+IGDSGVGKSNLL RFTR+EF E KSTIGVEF+++ IR +D+ V+ QIW
Sbjct: 4 DDYDYLYKVVMIGDSGVGKSNLLLRFTRDEFDPEKKSTIGVEFSSKQIRYNDETVRTQIW 63
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT+AYYRGA+GA+LVYDVT+ +FE+++RWL ELRD+ D +V M+VGNK
Sbjct: 64 DTAGQERYRAITNAYYRGALGAILVYDVTKKSSFESLDRWLSELRDNADKKVVEMIVGNK 123
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
DL +R VS ++ A++ FF ETSA + NVE AF ++ +I
Sbjct: 124 CDLEQMREVSIKEGEDMAKKIGAFFFETSAFDGKNVETAFMAIIQKI 170
>gi|7508981|pir||T26168 hypothetical protein W04G5.2 - Caenorhabditis elegans
Length = 212
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 143/188 (76%), Gaps = 16/188 (8%)
Query: 8 DDYDYLFK--------------VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATR 53
++Y YLFK VVLIG+ GVGKSNLLSRFTRNEF+L+SK TIGVEFAT+
Sbjct: 3 NEYYYLFKSNFIFQNFKRQIISVVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATK 62
Query: 54 SIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRD 113
I + K VK QIWDTAG ER+R S+YYRGA+GALLVYD+++H T+E+VE+WLK LRD
Sbjct: 63 IISVEGKAVKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRD 122
Query: 114 HTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQ 173
H + +IVI LVGNK+DL H AV T++A +AER + F+ETSAL++ NVE AFT ++T+
Sbjct: 123 HANEDIVITLVGNKSDLSH--AVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTE 180
Query: 174 IYRVVSRK 181
IY++VS K
Sbjct: 181 IYKLVSEK 188
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 140/171 (81%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R DDYDY +K+V+IGDSGVGK+N++++FTR EFS E+K+T+GVEFA + + DDKI+KA
Sbjct: 2 RNSDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
Q+WDTAGQERYRAI S+YY+GA GAL+V+D+T+ TF+NV+RW+KE+++ T + I I+LV
Sbjct: 62 QLWDTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMKEVQESTSNEISIILV 121
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
GNK+DLRHLR VS++ ++A+A + F+ETSA + NV AF +++ +I+
Sbjct: 122 GNKSDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINEIH 172
>gi|18266417|gb|AAL67568.1|AF461435_1 small GTP binding protein rab11 [Babesia gibsoni]
Length = 212
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/212 (55%), Positives = 148/212 (69%), Gaps = 5/212 (2%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKA 64
AD +YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ ++ KI KA
Sbjct: 3 ADQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVVLNNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA+GA++VYD+ +F +V +WL EL D+ D NI I LV
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAMGAIVVYDIACKSSFVSVSKWLTELHDYADGNITICLV 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR-KAL 183
GNK+DL HLR V+ ED AFA + F ETS L S NV+ AF E+L++I +R +
Sbjct: 123 GNKSDLTHLREVAKEDGEAFANENDLIFFETSCLNSENVDVAFKELLSRISEKHTRFDSS 182
Query: 184 EIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
+ +PK TI +G K KK+ CC
Sbjct: 183 TFPVSGSTMPK-NTIVLGVK--AMRKKKISCC 211
>gi|357514495|ref|XP_003627536.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355521558|gb|AET02012.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 216
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 151/215 (70%), Gaps = 18/215 (8%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVK 63
Y ++ DY+FKVV+IGDS VGK+ +LSRF++NE ++ + K++K
Sbjct: 17 YDMEEKIDYVFKVVVIGDSAVGKTQILSRFSKNE----------------TVTINGKVIK 60
Query: 64 AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
AQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ +F++V +W++ELR H D++IVIML
Sbjct: 61 AQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVAKWVEELRAHADNSIVIML 120
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNK DL LR V TEDA FAE + FF ETSAL +NVE AF ++L +I VVS+KAL
Sbjct: 121 VGNKGDLVDLRMVPTEDAVEFAEDQGLFFSETSALTGVNVEGAFMKLLEEINSVVSKKAL 180
Query: 184 EIGDDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
E G+ KG I+V G + ++S +KK+ CS
Sbjct: 181 ECGNVKGIALKGSKIDVISGAELEISEIKKLSSCS 215
>gi|428673459|gb|EKX74372.1| Ras-related protein rab11 small GTP-binding protein, putative
[Babesia equi]
Length = 221
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 135/170 (79%), Gaps = 1/170 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKA 64
AD +YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT++++ + KI KA
Sbjct: 3 ADHNYDYLFKIVLIGDSNVGKSNLLDRFVKGTFKLDSKSTIGVEFATKNVQLRNGKIAKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA GA++VYD+ +F++V RWL EL ++ D+N+VI+L
Sbjct: 63 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASRQSFQSVSRWLTELNEYGDANMVIVLA 122
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
GNK+DL +LR VSTEDA FA+ N F ETS L S NVE AFTE+L+ I
Sbjct: 123 GNKSDLVNLREVSTEDAERFAKANNLLFFETSCLNSDNVETAFTELLSAI 172
>gi|167378360|ref|XP_001734772.1| rab11 [Entamoeba dispar SAW760]
gi|165903573|gb|EDR29063.1| rab11, putative [Entamoeba dispar SAW760]
Length = 212
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/164 (62%), Positives = 133/164 (81%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I + K ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
E+YRAIT AYYRGA GA+ VYDV++ +F+ +ERW+ EL++ DS+I IM+VGNKADL+
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
R V+T D T FA++ + FF+ETSALE NVE AF+++L QIY+
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALEGTNVEKAFSDLLIQIYK 171
>gi|351725553|ref|NP_001235049.1| uncharacterized protein LOC100527366 [Glycine max]
gi|255632183|gb|ACU16451.1| unknown [Glycine max]
Length = 111
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/111 (96%), Positives = 109/111 (98%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M AY+ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MAAYKADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKEL 111
>gi|242045362|ref|XP_002460552.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
gi|241923929|gb|EER97073.1| hypothetical protein SORBIDRAFT_02g030540 [Sorghum bicolor]
Length = 256
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/227 (51%), Positives = 158/227 (69%), Gaps = 20/227 (8%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+ DY+FKVV++GDS VGK+ LL+RFTR+EF+L+SKSTIGVEF TR++ K VKAQIWD
Sbjct: 29 EIDYVFKVVVVGDSAVGKTQLLARFTRDEFALDSKSTIGVEFQTRTLTLHRKRVKAQIWD 88
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD-SNIVIMLVGNK 127
TAGQERYRA+TSAYYRGA+GA++VYDVTR TFE+V RW++ELR H D S+ V+ L+GNK
Sbjct: 89 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSSTVVALIGNK 148
Query: 128 ADLRH-LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
AD+ R V+ ++A AE + FF E SAL NVE AF +L +++ VVSR+ALE+
Sbjct: 149 ADMPAGRREVAADEAARLAEEQGLFFSEASALTGDNVERAFLTLLEEVFAVVSRRALEL- 207
Query: 187 DDPAALP-----------------KGQTINVGTKDDVSAVKKVGCCS 216
D+ + KG ++VG+ + SA+K+ C+
Sbjct: 208 DEARRMRGDQGQGDGGRGGEVLSLKGTAVDVGSIMETSAMKRSSQCA 254
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 223 bits (568), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/212 (51%), Positives = 146/212 (68%), Gaps = 6/212 (2%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
D D L+KVV+IGDSGVGKSNL++RFT+N+F+ ++K TIGVEF +SI D +K QIWD
Sbjct: 2 DCDVLYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWD 61
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQER+RAI++AYYRGA GAL+VYD+T +F+N+E+W KE+ + ++ + +LVGNK
Sbjct: 62 TAGQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKC 121
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDD 188
DL HLR V T AFAE+ N FMETSAL+S NV+ AFT +L +IY+ SRK+ + +D
Sbjct: 122 DLNHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKSKKPEED 181
Query: 189 PAALPKGQTINV------GTKDDVSAVKKVGC 214
P G + V G K + GC
Sbjct: 182 RKDEPIGPSDKVIIDDGEGDKPKPKPAQGGGC 213
>gi|407039687|gb|EKE39771.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 212
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 133/164 (81%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I + K ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
E+YRAIT AYYRGA GA+ VYDV++ +F+ +ERW+ EL++ DS+I IM+VGNKADL+
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
R V+T D T FA++ + FF+ETSAL+ NVE AF+++L QIY+
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK 171
>gi|67466968|ref|XP_649609.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466088|gb|EAL44223.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710050|gb|EMD49193.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 212
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 133/164 (81%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I + K ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
E+YRAIT AYYRGA GA+ VYDV++ +F+ +ERW+ EL++ DS+I IM+VGNKADL+
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGCDSDITIMIVGNKADLKQ 127
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
R V+T D T FA++ + FF+ETSAL+ NVE AF+++L QIY+
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK 171
>gi|355714881|gb|AES05148.1| RAB25, member RAS oncoprotein family [Mustela putorius furo]
Length = 199
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 138/188 (73%), Gaps = 8/188 (4%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIG+SGVGK+NLLSRFTRNEF +S++TIGVEF+TR++ +KAQIWDTAG ERY
Sbjct: 1 VVLIGESGVGKTNLLSRFTRNEFKQDSRTTIGVEFSTRTVTLGTAAIKAQIWDTAGLERY 60
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLV+D+T+H T+ ERWLKEL DH ++ IV+MLVGNK+DL+ R
Sbjct: 61 RAITSAYYRGAVGALLVFDLTKHQTYAVAERWLKELYDHAEATIVVMLVGNKSDLQQARE 120
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK--------ALEIGD 187
V TE+A FAE F+ETSAL+S NVE AF VL +I VS++ A+ +G
Sbjct: 121 VPTEEARMFAENNGLLFLETSALDSTNVELAFQTVLKEILTKVSKQRQSSSRTNAITLGG 180
Query: 188 DPAALPKG 195
A +G
Sbjct: 181 AQAGQEQG 188
>gi|328876805|gb|EGG25168.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 221
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/219 (50%), Positives = 153/219 (69%), Gaps = 10/219 (4%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++ DYLFK+V+IGDS VGKSNLL+RFTRNEF+ ++K+TIGV+F T+SI + K++ AQ
Sbjct: 3 EEENDYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIEGKVITAQC 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQER+RA+TS YYRGA+GA++VYD+T ++F+NV RWL ELR+ + +I++M+VGN
Sbjct: 63 WDTAGQERFRAVTSGYYRGALGAMIVYDITSKISFKNVTRWLNELREMAEPDILVMMVGN 122
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY-RVVSRKALEI 185
K+DL R VST +A +FAE F+ETSAL S NV +F ++LT IY + +KA +
Sbjct: 123 KSDLESSREVSTREAQSFAEANKISFLETSALNSTNVNLSFEKLLTDIYNQFGQKKAQVV 182
Query: 186 GDDPAALPK----GQTINVGTKDDVSAV-----KKVGCC 215
DD K GQ I + V+ K GCC
Sbjct: 183 MDDGQEWLKPTQSGQKITPLNEAPVNVTSTHQEPKKGCC 221
>gi|13537449|dbj|BAB40679.1| small GTPase Rab11C [Entamoeba histolytica]
Length = 212
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 133/164 (81%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQ 72
++K+V+IG+SGVGKSNLL RFTRNEF E K TIGVEFATR+I + K ++AQIWDTAGQ
Sbjct: 8 MYKLVIIGESGVGKSNLLLRFTRNEFEPEKKFTIGVEFATRTIEYEGKTIRAQIWDTAGQ 67
Query: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132
E+YRAIT AYYRGA GA+ VYDV++ +F+ +ERW+ EL++ DS+I IM+VGNKADL+
Sbjct: 68 EKYRAITDAYYRGAEGAMCVYDVSKKDSFDAIERWMNELKNGRDSDITIMIVGNKADLKQ 127
Query: 133 LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
R V+T D T FA++ + FF+ETSAL+ NVE AF+++L QIY+
Sbjct: 128 EREVNTSDGTEFAQKHSAFFIETSALDGTNVEKAFSDLLIQIYK 171
>gi|397628535|gb|EJK68942.1| hypothetical protein THAOC_09841 [Thalassiosira oceanica]
Length = 229
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 149/200 (74%), Gaps = 7/200 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQI 66
+ YD++FK+VL+GDSGVGKSNL+ RFT+NEF+ +SKSTIGVEFAT++++ DDK+VKAQI
Sbjct: 4 ESYDFIFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQI 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYR+I S+YYRGAVGALLVYDVT +F +V WLKE+ ++ + + +IMLVGN
Sbjct: 64 WDTAGQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGN 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI- 185
K DL R V D +FA + F+ETSAL++ V+ AF +L +IY+ ++K L+
Sbjct: 124 KMDLHEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKKQLKSQ 183
Query: 186 ---GDDPAAL-PK-GQTINV 200
G PA PK GQTI++
Sbjct: 184 GGGGKAPAKTGPKAGQTISL 203
>gi|326491937|dbj|BAJ98193.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496867|dbj|BAJ98460.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 137/180 (76%), Gaps = 1/180 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+ + DY+FKVV++GDS VGK+ LL RF ++EF L+SKSTIGVEF TR++ K VKAQI
Sbjct: 19 EGEIDYVFKVVVVGDSAVGKTQLLGRFAKDEFFLDSKSTIGVEFQTRTLTLHRKRVKAQI 78
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRA+TSAYYRGA+GA++VYDVTR TF++V RW++ELR H D + V+ LVGN
Sbjct: 79 WDTAGQERYRAVTSAYYRGALGAMVVYDVTRRATFDHVPRWVEELRAHADGSTVVALVGN 138
Query: 127 KADLR-HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI 185
KAD H R V ++A FAE + FF E SAL NVE AF +L +++ VVSR+ALE+
Sbjct: 139 KADAPAHRREVPADEAARFAEEQGLFFSEASALTGDNVERAFLALLEEVFAVVSRRALEL 198
>gi|297740452|emb|CBI30634.3| unnamed protein product [Vitis vinifera]
Length = 131
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/146 (76%), Positives = 115/146 (78%), Gaps = 22/146 (15%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M +YRADDDYDYLFK FSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MASYRADDDYDYLFK----------------------FSLESKSTIGVEFATRSIRVDDK 38
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV
Sbjct: 39 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 98
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAE 146
IMLVGNKADLRHLRA+ D + E
Sbjct: 99 IMLVGNKADLRHLRALCPRDRPSMLE 124
>gi|403366976|gb|EJY83296.1| Ras-like protein Rab-11A [Oxytricha trifallax]
Length = 255
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 137/177 (77%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M ++ + YDYLFK+VL+GDSGVGKSNLL RF +NEF ++TIGVEF+T+S++ + +
Sbjct: 1 MESFDNSNFYDYLFKIVLVGDSGVGKSNLLMRFVKNEFHQNMQTTIGVEFSTKSMQIEGQ 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+VKAQIWDTAGQERYRA+T AYYR AVGALL+YD+T +FEN+++W EL +H+++N V
Sbjct: 61 LVKAQIWDTAGQERYRALTHAYYRNAVGALLIYDITDRQSFENLKKWQSELANHSEANTV 120
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRV 177
++LVGNK DL RA+ E+A FA+ N F+ETSAL + NV AF ++T+I+++
Sbjct: 121 MILVGNKCDLSDQRAIKIEEAEKFAQSNNMAFIETSALNAKNVNIAFKNLITEIFKI 177
>gi|217069930|gb|ACJ83325.1| unknown [Medicago truncatula]
Length = 108
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 105/108 (97%), Positives = 107/108 (99%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIR DDK
Sbjct: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDK 60
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL 108
+VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWL 108
>gi|363746901|ref|XP_003643843.1| PREDICTED: ras-related protein Rab-25-like, partial [Gallus gallus]
Length = 156
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/155 (67%), Positives = 129/155 (83%)
Query: 17 VLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYR 76
VLIG+SGVGK+NLLSRFTRNEF+ +S++TIGVEF+TR++ D VKAQIWDTAG ERYR
Sbjct: 1 VLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTVLVGDAAVKAQIWDTAGLERYR 60
Query: 77 AITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAV 136
AITSAYYRGAVGAL+V+D+T+H T++ VERWLKEL DH +++IV+MLVGNK+DL R V
Sbjct: 61 AITSAYYRGAVGALVVFDITKHQTYDVVERWLKELYDHAEASIVVMLVGNKSDLAQEREV 120
Query: 137 STEDATAFAERENTFFMETSALESMNVENAFTEVL 171
TE+A FAE + F+ETSAL+S NVE AF VL
Sbjct: 121 PTEEAKMFAENKGLLFIETSALDSTNVEEAFETVL 155
>gi|225716714|gb|ACO14203.1| Ras-related protein YPTC6 [Esox lucius]
Length = 138
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/117 (87%), Positives = 112/117 (95%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
DD+YD+LFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQI
Sbjct: 5 DDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIML 123
WDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVIML
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIML 121
>gi|361128636|gb|EHL00566.1| putative Ras-related protein Rab-11B [Glarea lozoyensis 74030]
Length = 149
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/136 (75%), Positives = 118/136 (86%)
Query: 37 EFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 96
+F+L+SKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD++
Sbjct: 6 KFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIS 65
Query: 97 RHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETS 156
+H T+ENV RWLKELRDH DSNIVIMLVGNK+DLRHLRAV TE+A FA N F+ETS
Sbjct: 66 KHQTYENVTRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKQFASENNLSFIETS 125
Query: 157 ALESMNVENAFTEVLT 172
AL++ NVE AF +LT
Sbjct: 126 ALDASNVELAFQNILT 141
>gi|431892315|gb|ELK02755.1| Ras-related protein Rab-25 [Pteropus alecto]
Length = 190
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/156 (67%), Positives = 126/156 (80%)
Query: 16 VVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERY 75
VVLIG+SGVGK+NLLSRFTRNEFS +S++TIGVEF+TR++ VKAQIWDTAG ERY
Sbjct: 33 VVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERY 92
Query: 76 RAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRA 135
RAITSAYYRGAVGALLV+D+T+H T+ VERWLKEL DH ++ IV+MLVGNK+DL R
Sbjct: 93 RAITSAYYRGAVGALLVFDLTKHQTYSVVERWLKELYDHAEATIVVMLVGNKSDLSQARE 152
Query: 136 VSTEDATAFAERENTFFMETSALESMNVENAFTEVL 171
V T++A FAE F+ETSAL+S NVE AF VL
Sbjct: 153 VPTDEARMFAENNGLLFLETSALDSTNVELAFETVL 188
>gi|74833680|emb|CAI39320.1| rab_C09 [Paramecium tetraurelia]
Length = 212
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 154/219 (70%), Gaps = 16/219 (7%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R DDYDY +K+V+IGDSGVGK+N++++FTR EFS E+K+T+GVEFA + + DDKI+KA
Sbjct: 2 RNSDDYDYQYKIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
Q+WDTAGQERYRAI S+YY+GA GAL+V+D+T+ TF+NV+RW+K +++ T + I I+LV
Sbjct: 62 QLWDTAGQERYRAIISSYYKGASGALIVFDITKQSTFDNVDRWMK-VQESTSNEISIILV 120
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK+DLRHLR VS++ ++A+A + F+ETSA + NV AF ++++ KAL
Sbjct: 121 GNKSDLRHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFN-------KLINGKALI 173
Query: 185 IGDDPAALPKGQTINVGTKDD--------VSAVKKVGCC 215
+ + + K +I K + + + K GCC
Sbjct: 174 LNVEIHSKNKNNSIYTQKKTNQQITEAVQIDSQKDSGCC 212
>gi|145501753|ref|XP_001436857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834211|emb|CAI44483.1| rab_C72 [Paramecium tetraurelia]
gi|124404001|emb|CAK69460.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 136/175 (77%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+++YD+LFK++LIGDSGVGK+N+L RF +NEF L+SK TIGVEF+T++I ++K VK QI
Sbjct: 6 ENEYDFLFKIILIGDSGVGKTNILQRFVKNEFILDSKPTIGVEFSTKTINVENKSVKCQI 65
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQERYRAIT+AYYRGAVGA + YD+TR +TF N+E+WL E++++ NIVIM++GN
Sbjct: 66 WDTAGQERYRAITNAYYRGAVGAFVCYDITREITFTNIEKWLSEIKEYAPKNIVIMMIGN 125
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
K D + R V + +A ++ ++ETSA +NVE AF+ ++++I+ +S K
Sbjct: 126 KIDQANDRMVRSVEAAKLCQQNKIGYIETSAQNGLNVEEAFSNLVSEIFSSMSSK 180
>gi|328872576|gb|EGG20943.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 238
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 131/181 (72%), Gaps = 19/181 (10%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M ++YDYLF TRNEF+LE+KSTIGVEFATRSI + K
Sbjct: 1 MSRLTGQEEYDYLF-------------------TRNEFNLETKSTIGVEFATRSIETEGK 41
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
I+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ + T+++VERWL ELR++ D NI
Sbjct: 42 IIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWLTELRENADRNIE 101
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSR 180
IMLVGNK DLRHLR VST++A FAE+ F+ETSAL+S NVE AF +LTQI ++R
Sbjct: 102 IMLVGNKNDLRHLREVSTDEAKDFAEKHKLSFIETSALDSSNVEIAFQTILTQICHSMNR 161
Query: 181 K 181
+
Sbjct: 162 Q 162
>gi|403221558|dbj|BAM39691.1| small GTPase [Theileria orientalis strain Shintoku]
Length = 212
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 128/169 (75%), Gaps = 1/169 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKAQ 65
+ +YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + K KAQ
Sbjct: 4 EHNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVTLKNGKTAKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL ++ D N++I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLTELNEYGDPNMIIALVG 123
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
NK+DL HLR VS+ED +A N F ETS L + N++ AFTE+L+ I
Sbjct: 124 NKSDLTHLREVSSEDGERYAHSNNLMFFETSCLNNENIDTAFTELLSSI 172
>gi|71034167|ref|XP_766725.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353682|gb|EAN34442.1| GTP-binding protein rab11, putative [Theileria parva]
gi|110825814|gb|ABH00983.1| small GTP-binding protein [Theileria parva]
Length = 212
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 128/169 (75%), Gaps = 1/169 (0%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQ 65
D +YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + K+ KAQ
Sbjct: 4 DQNYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLRNGKVAKAQ 63
Query: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVG 125
IWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL ++ D+N++I LVG
Sbjct: 64 IWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDANMIIALVG 123
Query: 126 NKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
NK+DL HLR V+ ED +A+ N F ETS L + N++ FTE+L I
Sbjct: 124 NKSDLTHLREVTYEDGERYAKSNNLIFFETSCLSNENIDTTFTELLNLI 172
>gi|102139910|gb|ABF70059.1| GTP-binding protein, putative [Musa acuminata]
Length = 175
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 132/175 (75%), Gaps = 6/175 (3%)
Query: 46 IGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE 105
+ F ++ KI ++ + A RYRAITSAYYRGAVGALLVYDVTRH TFENV
Sbjct: 2 FNLRFLVYRLQFAQKISRSMNINLAYNCRYRAITSAYYRGAVGALLVYDVTRHTTFENVS 61
Query: 106 RWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVEN 165
RWL+ELRDHTD NI+IML+GNK+DLRHL AV TED A+AE+E+ +FMETSALE+ NV+N
Sbjct: 62 RWLRELRDHTDPNIIIMLIGNKSDLRHLVAVPTEDGKAYAEKESLYFMETSALEATNVDN 121
Query: 166 AFTEVLTQIYRVVSRKALEIGDDPA--ALPK-GQTINVGTKDDVS-AVKKVGCCS 216
AF EVLTQIY +VSRKA+E GDD A A P G+ INV KDD S ++K+ CCS
Sbjct: 122 AFAEVLTQIYHIVSRKAVEAGDDAASSAPPSTGERINV--KDDASTTMRKLSCCS 174
>gi|300176554|emb|CBK24219.2| unnamed protein product [Blastocystis hominis]
Length = 281
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 136/178 (76%), Gaps = 2/178 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
M ++ YDYLF VLIGD+GVGK+N+L+R+ +NEF ++KST+GVEFA++ + D+K
Sbjct: 1 MSTAEPEERYDYLF--VLIGDTGVGKTNILTRYAKNEFYTDTKSTVGVEFASKCVTIDNK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIV 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T TF+N+ WL EL ++D+++
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITVRSTFDNIGVWLAELSHYSDNDMT 118
Query: 121 IMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV 178
I+LVGNK DL +LR + +++A FAE+ N F+ETSA +S ++ AF +L+ IY +
Sbjct: 119 IVLVGNKCDLANLRVIESQEAVQFAEQHNIAFIETSAYDSTGIDKAFETILSGIYTCI 176
>gi|102139999|gb|ABF70134.1| GTP-binding protein, putative [Musa balbisiana]
Length = 192
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/145 (71%), Positives = 121/145 (83%), Gaps = 5/145 (3%)
Query: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLR 134
YRAITSAYYRGAVGALLVYDVTRH TFENV RWL+ELRDHTD NI++ML+GNK+DLRHL
Sbjct: 49 YRAITSAYYRGAVGALLVYDVTRHTTFENVSRWLRELRDHTDPNIIVMLIGNKSDLRHLV 108
Query: 135 AVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDPA--AL 192
AV TED A+AE+E+ +FMETSALE+ NV+NAF EVLTQIY +VSRKA+E GDD A A
Sbjct: 109 AVPTEDGKAYAEKESLYFMETSALEATNVDNAFAEVLTQIYHIVSRKAVEAGDDAASSAP 168
Query: 193 PK-GQTINVGTKDDVSAVKKVGCCS 216
P G+ INV KDD S ++K+ CCS
Sbjct: 169 PSTGERINV--KDDASTMRKLSCCS 191
>gi|300174998|emb|CBK20309.2| unnamed protein product [Blastocystis hominis]
Length = 183
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 132/161 (81%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQE 73
F VVLIGDS VGK+N+LSRF +EF+L+SK+T+GVEF+ + ++ ++ I+KAQIWDTAGQE
Sbjct: 18 FVVVLIGDSNVGKTNILSRFANDEFNLDSKATVGVEFSAKCVKVNNSIIKAQIWDTAGQE 77
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHL 133
RYR+ITSAYYRGAVGAL+VYD+T +FENVE WL ELR H+D ++V++L+GNK DL +
Sbjct: 78 RYRSITSAYYRGAVGALMVYDITSRSSFENVEGWLSELRQHSDGDMVVVLIGNKCDLANQ 137
Query: 134 RAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
R++ST++A A+AE+ N F+ETSA E ++ AFT VL ++
Sbjct: 138 RSISTDEARAYAEKHNMAFIETSAYERTGIDEAFTMVLKRL 178
>gi|115469954|ref|NP_001058576.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|53791772|dbj|BAD53566.1| putative PRA2 [Oryza sativa Japonica Group]
gi|113596616|dbj|BAF20490.1| Os06g0714600 [Oryza sativa Japonica Group]
gi|125556744|gb|EAZ02350.1| hypothetical protein OsI_24454 [Oryza sativa Indica Group]
gi|125598494|gb|EAZ38274.1| hypothetical protein OsJ_22652 [Oryza sativa Japonica Group]
Length = 225
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/222 (54%), Positives = 156/222 (70%), Gaps = 13/222 (5%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++ DY+FKVV+IGDS VGK+ LL RFT++EF ++SKSTIG+EF TR++ K VKAQIW
Sbjct: 2 EEEDYVFKVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYDVT +F + RWL +LR H D++IV+ML+GNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTSRRSFHHAARWLHDLRAHADNSIVVMLIGNK 121
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL---- 183
ADL H RAV+ ++A AFAE + FF E SAL NVE AF +L +I+ +VSR++L
Sbjct: 122 ADLSHARAVAADEAAAFAEDQGLFFSEASALSGDNVEEAFLGLLREIHAIVSRRSLLEMD 181
Query: 184 EIGDDPAALPKGQTINVGTK---------DDVSAVKKVGCCS 216
I D AA + GTK + SA+K+V CS
Sbjct: 182 GINGDAAANANAALMLRGTKLSLSDELSIMETSAIKRVSRCS 223
>gi|449677940|ref|XP_002159779.2| PREDICTED: ras-related protein Rab-11B-like, partial [Hydra
magnipapillata]
Length = 162
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/162 (62%), Positives = 123/162 (75%), Gaps = 7/162 (4%)
Query: 60 KIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
K++KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NI
Sbjct: 2 KVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHITYENVERWLKELRDHADANI 61
Query: 120 VIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
VIMLVGNK+DLRHLRAV TE+A AFAE+ F+ETSAL+S NVE AF +L +IY +VS
Sbjct: 62 VIMLVGNKSDLRHLRAVPTEEAKAFAEKNELSFIETSALDSTNVEVAFRNILEEIYHIVS 121
Query: 180 RKALE-----IGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
+K + G+ P+ QTI V ++ K V CC
Sbjct: 122 QKQIHNASNRTGNQPS--DNVQTIQVAPTVEIDQRKSVKCCQ 161
>gi|440494412|gb|ELQ76793.1| GTPase Rab11/YPT3, small G protein superfamily [Trachipleistophora
hominis]
Length = 207
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 134/183 (73%), Gaps = 7/183 (3%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++YDYLFK+VLIGDSGVGK+NLLS+ TR EFS E+K+TIGVEFAT++ + D ++KAQIW
Sbjct: 2 ENYDYLFKIVLIGDSGVGKTNLLSQLTRKEFSAETKATIGVEFATKTFKIDSLVIKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER-WLKELRDHTDSNIVIMLVGN 126
DTAGQERYRAITSAYYRG +GAL+VYD+TR T N + WL +L++++ I IMLVGN
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALVVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMLVGN 121
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIG 186
K DL R V+ A+ N F+ETSAL+ NVE AF E++ +YR RKAL
Sbjct: 122 KTDLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFEELIKAVYR--KRKAL--- 176
Query: 187 DDP 189
DP
Sbjct: 177 -DP 178
>gi|323309207|gb|EGA62432.1| Ypt32p [Saccharomyces cerevisiae FostersO]
Length = 153
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/136 (70%), Positives = 118/136 (86%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
DYDYLFK+VLIGDSGVGKSNLLSRFT +EF++ESKSTIGVEFATR+I ++K +KAQIWD
Sbjct: 9 DYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRAITSAYYRGAVGAL+VYD+++ ++EN WL ELR++ D N+ + L+GNK+
Sbjct: 69 TAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKS 128
Query: 129 DLRHLRAVSTEDATAF 144
DL HLRAV T++A F
Sbjct: 129 DLAHLRAVPTDEAKKF 144
>gi|84997692|ref|XP_953567.1| small GTPase (Rab11 ) [Theileria annulata]
gi|65304564|emb|CAI72889.1| small GTPase (Rab11 homologue), putative [Theileria annulata]
Length = 207
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 125/170 (73%), Gaps = 1/170 (0%)
Query: 6 ADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDD-KIVKA 64
A+ YDYLFK+VLIGDS VGKSNLL RF + F L+SKSTIGVEFAT+++ + KI KA
Sbjct: 2 AEQTYDYLFKIVLIGDSNVGKSNLLDRFVKGNFKLDSKSTIGVEFATKNVNLKNGKIAKA 61
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
QIWDTAGQERYRAITSAYYRGA GA++VYD+ +F NV RWL EL ++ D N++I LV
Sbjct: 62 QIWDTAGQERYRAITSAYYRGARGAIVVYDIASKQSFYNVSRWLSELNEYGDPNMIIALV 121
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQI 174
GNK+DL HLR V+ ED +A N F ETS L + N++ F E+L I
Sbjct: 122 GNKSDLTHLREVTFEDGERYARSNNLLFFETSCLNNENIDTTFGELLNLI 171
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 135/208 (64%), Gaps = 1/208 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +SN+ IML+GNKAD
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNKAD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FMETSA + NVE AF ++I++ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQKIEEGVFDVSNEA 182
Query: 190 AALPKGQTIN-VGTKDDVSAVKKVGCCS 216
+ + G N G + D S + GCCS
Sbjct: 183 SGIKIGVLPNHPGHRGDSSGPQSGGCCS 210
>gi|312377320|gb|EFR24177.1| hypothetical protein AND_11405 [Anopheles darlingi]
Length = 1044
Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats.
Identities = 98/141 (69%), Positives = 115/141 (81%), Gaps = 6/141 (4%)
Query: 58 DDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDS 117
D K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D
Sbjct: 7 DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQ 66
Query: 118 NIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRV 177
NIVIMLVGNK+DLRHLRAV T++A FAER F+ETSAL+S NVE AF +LT+IYR+
Sbjct: 67 NIVIMLVGNKSDLRHLRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRI 126
Query: 178 VSRKALEIGDDPAALPKGQTI 198
VS+K + DP P+G I
Sbjct: 127 VSQKQIR---DP---PEGSVI 141
>gi|429965625|gb|ELA47622.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 207
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 132/178 (74%), Gaps = 3/178 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+ YDYLFK+VLIGDSGVGK+NLLS+ TR EFS E+K+TIGVEFATR+ + D+ ++KAQIW
Sbjct: 2 ESYDYLFKIVLIGDSGVGKTNLLSQLTRGEFSAETKATIGVEFATRTFKIDNLVIKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVER-WLKELRDHTDSNIVIMLVGN 126
DTAGQERYRAITSAYYRG +GAL+VYD+TR T N + WL +L++++ I IM+VGN
Sbjct: 62 DTAGQERYRAITSAYYRGTLGALIVYDITRKSTLSNATKHWLTQLKEYSGEEIEIMMVGN 121
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
K DL R V+ A+ N F+ETSAL+ NVE AF E++ +YR RK L+
Sbjct: 122 KTDLEDERTVTVACGNDAAKSNNLNFLETSALDGSNVEKAFDELIKAVYR--RRKTLD 177
>gi|413950279|gb|AFW82928.1| ras protein Rab11C [Zea mays]
Length = 182
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/164 (62%), Positives = 126/164 (76%), Gaps = 4/164 (2%)
Query: 56 RCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT 115
+ + KI+KAQIWDTAGQERYRAITSAYYRGA+GA+LVYDV++ TFEN+ RWLKELRDH
Sbjct: 19 QVEGKIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHA 78
Query: 116 DSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DSN IMLVGNK DLRHLRAV+T+DA +FAE E ++ETSALE+ NVE AF +L IY
Sbjct: 79 DSNTRIMLVGNKTDLRHLRAVATDDARSFAEAEGLSYIETSALEATNVEEAFQLILGDIY 138
Query: 176 RVVSRKAL---EIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
R VS+K + E+G + +G+TI+V T D +A KK CCS
Sbjct: 139 RAVSKKPVASDEVGAGQGGVKEGKTIDVATGADAAAHKK-QCCS 181
>gi|440291835|gb|ELP85077.1| rab11, putative [Entamoeba invadens IP1]
Length = 211
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 136/187 (72%), Gaps = 3/187 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+DYD L+K V++GDSG GK+ LL RFTRNEF E KSTIGVEF+++ I+ D V+ QIW
Sbjct: 2 EDYDVLYKTVMMGDSGAGKTCLLMRFTRNEFDAEKKSTIGVEFSSKQIQYKDSAVRIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRAIT AYYRG++GA++VYDVT+ +FE ++RW EL ++ D ++V M++GNK
Sbjct: 62 DTAGQERYRAITGAYYRGSLGAVMVYDVTKKSSFEALDRWHNELIENGDKSVVKMVIGNK 121
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY-RVVSRKALEIG 186
DL +R V+TE+A FA++ ++F ETSA++ NVE AF +++ I R +KA E
Sbjct: 122 CDLEQMREVTTEEAEEFAKKTGSYFFETSAMDGTNVEKAFMQMIETICDRQFEKKAAEA- 180
Query: 187 DDPAALP 193
PA P
Sbjct: 181 -KPAQKP 186
>gi|440297845|gb|ELP90486.1| rab11, putative [Entamoeba invadens IP1]
Length = 222
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/165 (60%), Positives = 124/165 (75%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAG 71
+ +VV+IG+SGVGKSNLL RFTRNE+ E K TIGVEFATR+I D K ++AQIWDTAG
Sbjct: 21 FSLEVVIIGESGVGKSNLLLRFTRNEYEPEKKFTIGVEFATRTIEYDGKTIRAQIWDTAG 80
Query: 72 QERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLR 131
QE+YRAIT AYYRGA GA+ VYDV++ TF ++RW+ EL+ ++VIM+VGNK+DL
Sbjct: 81 QEKYRAITDAYYRGAEGAVCVYDVSKKDTFTAIDRWMTELKAGCGDDVVIMIVGNKSDLE 140
Query: 132 HLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
R V + FA+R N+FFMETSAL NVE AFTE+L IY+
Sbjct: 141 QERDVKPSEGEEFAQRHNSFFMETSALTGNNVEKAFTELLVHIYK 185
>gi|224002539|ref|XP_002290941.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972717|gb|EED91048.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 172
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 132/171 (77%), Gaps = 1/171 (0%)
Query: 12 YLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRC-DDKIVKAQIWDTA 70
Y FK+VL+GDSGVGKSNL+ RFT+NEF+ +SKSTIGVEFAT++++ DDK+VKAQIWDTA
Sbjct: 1 YSFKIVLLGDSGVGKSNLVFRFTKNEFNKDSKSTIGVEFATKTVQIEDDKLVKAQIWDTA 60
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYR+I S+YYRGAVGALLVYDVT +F +V WLKE+ ++ + + +IMLVGNK DL
Sbjct: 61 GQERYRSIASSYYRGAVGALLVYDVTDRNSFNHVPMWLKEVEENAEKDCLIMLVGNKMDL 120
Query: 131 RHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRK 181
R V D +FA + F+ETSAL++ V+ AF +L +IY+ ++K
Sbjct: 121 HEQRTVFVRDGRSFARKNGLAFIETSALDATGVDTAFQRILQEIYKTQTKK 171
>gi|326488455|dbj|BAJ93896.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/221 (53%), Positives = 152/221 (68%), Gaps = 11/221 (4%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++ DY+FKVV+IGDSGVGK+ LL RFTR +F L+SKSTIG+EF TR++ + VKAQIW
Sbjct: 2 EEPDYVFKVVVIGDSGVGKTQLLGRFTRGDFCLDSKSTIGIEFQTRTVDIARRRVKAQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQERYRA+TSAYYRGA+GA+LVYDVTR +F + RW+ ELR H D +IV+ LVGNK
Sbjct: 62 DTAGQERYRAVTSAYYRGALGAMLVYDVTRRDSFGHAARWVAELRAHADKSIVVALVGNK 121
Query: 128 ADLRHL----RAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
ADL R V ++A AFAE + FF E SAL NVE AF +L +I+ VSRK L
Sbjct: 122 ADLATAAPARREVRADEAEAFAEEQGLFFYEASALSGDNVEAAFLGLLEEIHAAVSRKPL 181
Query: 184 EI------GDDPAALPKGQTINVG-TKDDVSAVKKVGCCSN 217
E GDD + KG +++ + + SA+K CS+
Sbjct: 182 EAARGNGDGDDDVLVLKGISLSQELSMMETSAMKTPSRCSS 222
>gi|125546393|gb|EAY92532.1| hypothetical protein OsI_14270 [Oryza sativa Indica Group]
Length = 168
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/164 (65%), Positives = 128/164 (78%), Gaps = 5/164 (3%)
Query: 56 RCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHT 115
+ + K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT+ TFENV+RWLKELRDH
Sbjct: 6 QVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKELRDHA 65
Query: 116 DSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DSNIV+ML+GNK DL+HLR+VS EDAT+FAERE F+ETSAL++ NV+ AF VLT+IY
Sbjct: 66 DSNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETSALDATNVDKAFQTVLTEIY 125
Query: 176 RVVSRK---ALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCS 216
R++S+K A E G A+ +GQ+I V D S + CCS
Sbjct: 126 RIISKKALAADEAGAGAGAVREGQSIQVSATDSSSFTSR--CCS 167
>gi|349804351|gb|AEQ17648.1| putative member ras oncogene protein 1 [Hymenochirus curtipes]
Length = 116
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/119 (84%), Positives = 110/119 (92%), Gaps = 3/119 (2%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDK 60
MGA DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K
Sbjct: 1 MGA--RDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK 58
Query: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNI 119
+KAQIWDTAGQERYRAITSAYYRGA GALLVYD+ +H+T+ENVERWLKELRDH D+NI
Sbjct: 59 TIKAQIWDTAGQERYRAITSAYYRGA-GALLVYDIAKHLTYENVERWLKELRDHADNNI 116
>gi|145533477|ref|XP_001452483.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420182|emb|CAK85086.1| unnamed protein product [Paramecium tetraurelia]
Length = 215
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 146/217 (67%), Gaps = 13/217 (5%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DYD L K++++GDSGVGK+NL++RF + +F +SK T+GVEF R I K +KAQ+
Sbjct: 4 EEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQV 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQE++RAIT YYRGA+GA++ YD+T+ +F NVERW++ELR+H DSN+V+ML+G
Sbjct: 64 WDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGT 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV-------- 178
K+DL R V ED T A + N F+ETSAL++ NV AF+ +L +IY +
Sbjct: 124 KSDLESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLLEKIYVGIDNQGKEYQ 183
Query: 179 SRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
R ++++ +P + Q TK D + KK CC
Sbjct: 184 KRASIKLTSEPITIKNAQN----TKPDTTKSKK-QCC 215
>gi|357512579|ref|XP_003626578.1| Ras-related GTP-binding protein [Medicago truncatula]
gi|355501593|gb|AES82796.1| Ras-related GTP-binding protein [Medicago truncatula]
Length = 232
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 144/218 (66%), Gaps = 20/218 (9%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIV 62
A R DY+FKVV+IGDS VGK+ +LSRF +NEF +SKSTIGVEF TR++ + K++
Sbjct: 30 AERPLQKIDYVFKVVVIGDSAVGKTQMLSRFAKNEFCFDSKSTIGVEFQTRTVTINGKLI 89
Query: 63 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
KAQIWDTAGQERYRA+TSAYYRGA+GA+LVYD+T+ TF++V RW++ELR H D++IVIM
Sbjct: 90 KAQIWDTAGQERYRAVTSAYYRGALGAMLVYDITKRQTFDHVARWIEELRSHADNSIVIM 149
Query: 123 LVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKA 182
L+GNK DL R V T+ FF+ +I +VVS+++
Sbjct: 150 LIGNKGDLVDQRVVHTDKCCGVCRGSGPFFLRD----------------FKINKVVSKRS 193
Query: 183 LEI--GDDPAALPKGQTINV--GTKDDVSAVKKVGCCS 216
LE G + A KG I++ G + D++ +K+V CS
Sbjct: 194 LESNNGKNNIATLKGSKIDIISGPELDITEMKEVPSCS 231
>gi|145525673|ref|XP_001448653.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834495|emb|CAI44562.1| rab_A44 [Paramecium tetraurelia]
gi|124416208|emb|CAK81256.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 129/173 (74%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D++ YLFK++LIGDSGVGK+NL +R EF +++ TIGVEF R++R D +VK QI
Sbjct: 3 EDEFSYLFKIILIGDSGVGKTNLFNRLQNKEFQYDTRPTIGVEFINRTVRQDGNLVKCQI 62
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQE++RAIT+AYYRGA G + YDVT+ T+E+ RW+ E++ D +IVIMLVGN
Sbjct: 63 WDTAGQEKFRAITNAYYRGAKGVFVCYDVTKQGTYESTLRWMSEIKQFGDHDIVIMLVGN 122
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVS 179
K DL R V T++ + F E+ ++ETSAL ++NVE AF +++T+IY++VS
Sbjct: 123 KIDLAEQRIVRTDEVSQFCEQNKVGYIETSALNNINVEMAFNQMVTEIYKIVS 175
>gi|340500662|gb|EGR27525.1| Ras-related protein ric2, putative [Ichthyophthirius multifiliis]
Length = 235
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 142/208 (68%), Gaps = 9/208 (4%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYL K+VL+GDSGVGKSN+LSRFTR++F +++ STIGVEF R I ++KI++ QIWDT
Sbjct: 34 YDYLIKIVLVGDSGVGKSNILSRFTRDQFQIDNCSTIGVEFGQRIITTENKIIQTQIWDT 93
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AG E++++IT ++RGA+G LL+YD+T+ +F+ E+ ++++D+ + + I+LVGNK D
Sbjct: 94 AGTEKFQSITQQFFRGALGVLLIYDITKQASFQQCEKLFQQIKDNVEDHTQILLVGNKTD 153
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
+ +LR VS ++ FA+ F+E SALE++N++ AF V+ QIY + + + + D
Sbjct: 154 ISNLRTVSKQEGLEFAKTHKIQFIEVSALENINIDQAFMIVVQQIYELCQKSYVTVETDK 213
Query: 190 AALPKGQTINVGTKDDVSAVKKVGCCSN 217
+ KD+V +K CC+N
Sbjct: 214 ---------KIQLKDNVDKIKIAHCCTN 232
>gi|194744897|ref|XP_001954929.1| GF16497 [Drosophila ananassae]
gi|190627966|gb|EDV43490.1| GF16497 [Drosophila ananassae]
Length = 166
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 122/164 (74%), Gaps = 12/164 (7%)
Query: 59 DKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN 118
D + KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWL+ELRDH D N
Sbjct: 9 DYLFKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQN 68
Query: 119 IVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV 178
IVIMLVGNK+DLRHLR+V T++A FAER F+ETSAL+S NVE AF +LT+IYR+V
Sbjct: 69 IVIMLVGNKSDLRHLRSVPTDEAKLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIV 128
Query: 179 SRKALEIGDDPAALPKGQTIN------VGTKDDVSAVKKVGCCS 216
S+K + DP P+G I + K V+A + CC
Sbjct: 129 SQKQIR---DP---PEGDVIRPSNVEPIDVKPTVTADVRKQCCQ 166
>gi|413934936|gb|AFW69487.1| hypothetical protein ZEAMMB73_585575 [Zea mays]
Length = 224
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 143/200 (71%), Gaps = 12/200 (6%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTA 70
DY+FK+V++GDS VGK+ LL RFTR+EF L+SKSTIG+EF TR++ VKAQIWDTA
Sbjct: 4 DYVFKIVVVGDSAVGKTQLLGRFTRDEFFLDSKSTIGIEFQTRTVDIARHRVKAQIWDTA 63
Query: 71 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADL 130
GQERYRA+TSAYYRGA+GA+LVYDVT TF++ RW+ ELR H D +IV+MLVGNKADL
Sbjct: 64 GQERYRAVTSAYYRGALGAMLVYDVTSRRTFDHATRWVAELRAHADKSIVVMLVGNKADL 123
Query: 131 RH---LRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
RAV ++A AFAE + FF E SAL NVE AF +L +I+ +VSRK L+
Sbjct: 124 ARDAGRRAVDADEAAAFAEEQGLFFSEASALSGDNVERAFLTLLREIHAIVSRKTLD--- 180
Query: 188 DPAALPKGQTINV----GTK 203
AA G T +V GTK
Sbjct: 181 --AAAETGGTTDVLALKGTK 198
>gi|66807211|ref|XP_637328.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122086021|sp|Q54KM9.1|RB11B_DICDI RecName: Full=Ras-related protein Rab-11B
gi|2708641|gb|AAB92559.1| GTPase rab11b [Dictyostelium discoideum]
gi|60465730|gb|EAL63807.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 220
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 129/167 (77%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YDYL K+V+IGDSGVGKSNLLSR+ +NEFS+ STIGVEF+T++++ D+K++K Q+WD
Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWD 66
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQE+Y +IT +YY+GA+GAL+VY++ +F N+E+WLK+ R++ + IMLVGNK+
Sbjct: 67 TAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKS 126
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
DL+ R VST + FAE+ F+ETSAL+S NVE AF + IY
Sbjct: 127 DLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIY 173
>gi|145492543|ref|XP_001432269.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834368|emb|CAI44526.1| rab_B44 [Paramecium tetraurelia]
gi|124399379|emb|CAK64872.1| unnamed protein product [Paramecium tetraurelia]
Length = 212
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 4/211 (1%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
+D++ YLFK++LIGDSGVGK+NL +R +F +++ TIGVEF R++R D ++K QI
Sbjct: 4 NDEFSYLFKIILIGDSGVGKTNLFNRLQYKDFQYDTRPTIGVEFLNRTVREDGNLIKCQI 63
Query: 67 WDT--AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLV 124
WDT AGQE++RAITSAYYRGA G + YDVT+ TFE+ RW+ E++ + DSNIVIMLV
Sbjct: 64 WDTVKAGQEKFRAITSAYYRGAKGVFVCYDVTKQGTFESTLRWMSEIKQYGDSNIVIMLV 123
Query: 125 GNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALE 184
GNK DL R V T++ + F ++ ++ETSAL ++NVE AF +++T+IY++V +
Sbjct: 124 GNKIDLADQRIVRTDEVSQFCDQNKVGYVETSALNNVNVELAFNQMVTEIYKIVQGQK-P 182
Query: 185 IGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
I + + T+ D S+ KK+ CC
Sbjct: 183 ISQTKLGINDVYVLKKETQPD-SSKKKMQCC 212
>gi|154333217|ref|XP_001562869.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059874|emb|CAM37302.1| putative small GTP-binding protein Rab11 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 208
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 132/208 (63%), Gaps = 1/208 (0%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
+D + FK+VLIGDSGVGKSNL++R+T +EFS E+ STIGVEF T+SI+ +D+ K QIW
Sbjct: 2 EDTNLSFKIVLIGDSGVGKSNLMTRYTMSEFSQETPSTIGVEFMTKSIKIEDRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPVTCCIFLIGNK 121
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
DL HLR V E A FA F+ETSALE NV+ AF + +Y VV D
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVVVTPQTREAD 181
Query: 188 DPAALPKGQTINVGTKDDVSAVKKVGCC 215
P G+T+N+ + K GCC
Sbjct: 182 RTVPKP-GRTVNMNPGETSEVKKSGGCC 208
>gi|401416870|ref|XP_003872929.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322489155|emb|CBZ24407.1| putative Rab11 GTPase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 208
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 134/209 (64%), Gaps = 3/209 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++ + FK+VLIGDSGVGKSNL++R+T NEF+ E+ STIGVEF T+S++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR + I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
DL HLR V E A FA F+ETSALE NV+ AF + +Y VV D
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALEKTNVDKAFEWLAKSVYEVVVTPQTREAD 181
Query: 188 DPAALPK-GQTINVGTKDDVSAVKKVGCC 215
A PK G+T+N+ + A K GCC
Sbjct: 182 RTA--PKQGRTVNMNPSESPEAKKSSGCC 208
>gi|313227810|emb|CBY22959.1| unnamed protein product [Oikopleura dioica]
Length = 215
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 142/211 (67%), Gaps = 6/211 (2%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYLFK+VL+GD GVGK+ + +R+T +EF+ +SKSTIGVEFA +++ + +K QIWDT
Sbjct: 3 YDYLFKIVLVGDCGVGKTQIRNRYTLDEFNPQSKSTIGVEFAFKTVNINGNDIKGQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
+G+ERYRAITSAYYRG+VGA+LV+DVT+ +FE++E W +LR + D NIV+ +VGNK D
Sbjct: 63 SGEERYRAITSAYYRGSVGAILVFDVTKPKSFESLENWASQLRQYADENIVVCVVGNKID 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L R VST +A FA F+METSAL+ VENAF +V +I+ +V +
Sbjct: 123 L-PTREVSTVEAERFARGNGFFYMETSALDGTGVENAFRQVTKKIFEIVDSRQQARKKTV 181
Query: 190 AALPKGQT--INVGTKDDV---SAVKKVGCC 215
A GQT I +G D+V S CC
Sbjct: 182 RASSIGQTRSIKLGEADEVAKPSIFSSSDCC 212
>gi|297790260|ref|XP_002863031.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308833|gb|EFH39290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/168 (63%), Positives = 123/168 (73%), Gaps = 7/168 (4%)
Query: 53 RSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELR 112
R I + K VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+ TF+NV RWL+ELR
Sbjct: 2 RVITVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR 61
Query: 113 DHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLT 172
DH DSNIVIM+ GNKADL HLR+V+ ED AE E F+ETSALE+ NVE AF VL
Sbjct: 62 DHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLA 121
Query: 173 QIYRVVSRK---ALEIGDDPAALP-KGQTINVGTKDDVSAVKKVGCCS 216
+IY ++S+K A E +A+P +G TINVG D S K GCCS
Sbjct: 122 EIYHIISKKALAAQEAAAANSAIPGQGTTINVG---DTSGAGKRGCCS 166
>gi|226507848|ref|NP_001151959.1| ras-related protein Rab11A [Zea mays]
gi|195651361|gb|ACG45148.1| ras-related protein Rab11A [Zea mays]
gi|223945145|gb|ACN26656.1| unknown [Zea mays]
gi|414886383|tpg|DAA62397.1| TPA: Ras protein Rab11A [Zea mays]
Length = 248
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/221 (50%), Positives = 152/221 (68%), Gaps = 13/221 (5%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+ DY+FKVV++GD+ VGK+ LL+RF R+EF+L+SK TIGVEF TR++ K VK QIWD
Sbjct: 26 EIDYVFKVVVVGDAAVGKTQLLARFARDEFALDSKPTIGVEFQTRTLTLHRKRVKTQIWD 85
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQERYRA+TSAYYRGA+GA++VYDVTR TFE+V RW++ELR H D + V+ L+GNKA
Sbjct: 86 TAGQERYRAVTSAYYRGALGAMVVYDVTRRATFEHVARWVEELRAHADGSTVVALIGNKA 145
Query: 129 DLRHL-RAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEI-- 185
D+ R V ++A AE + FF E SAL NVE AF +L +++ VSR+ALE+
Sbjct: 146 DMPAARREVPADEAARLAEDQGLFFSEASALTGDNVERAFLTLLEEVFAAVSRRALELDE 205
Query: 186 --------GDDPAAL--PKGQTINVGTKDDVSAVKKVGCCS 216
GD + KG ++VG+ + SA+K+ C+
Sbjct: 206 ARRMRGDQGDGGGEVLSLKGTAVDVGSIMETSAMKRSSQCA 246
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus anophagefferens]
Length = 208
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 132/206 (64%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F + TIGVEF R + DD+ VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDDRQVKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYDVTR TF ++ RWL+E R + ++ +V+ML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDVTRRETFNHLTRWLEEARHNANTEMVVMLIGNKSD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVST++ FA R FMETSA + NVE AF + +IY + + ++ +D
Sbjct: 123 LEHRRAVSTKEGADFAARNGLIFMETSAKTARNVEGAFIQTAHKIYENIQKGVYDVTNDS 182
Query: 190 AALPKGQTINVGTKDDVSAVKKVGCC 215
+ G + +A GCC
Sbjct: 183 HGIKVGAHSSSAASVPGAASGTAGCC 208
>gi|118379577|ref|XP_001022954.1| Ras family protein [Tetrahymena thermophila]
gi|89304721|gb|EAS02709.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 1307
Score = 201 bits (511), Expect = 2e-49, Method: Composition-based stats.
Identities = 93/158 (58%), Positives = 125/158 (79%)
Query: 18 LIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRA 77
L DSGVGKS L+SRFT+++FS+E + TIGVEF+T++I+ DKI+KAQIWDTAGQERYRA
Sbjct: 1104 LACDSGVGKSCLISRFTKDQFSMEQQPTIGVEFSTKTIKISDKIIKAQIWDTAGQERYRA 1163
Query: 78 ITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVS 137
ITSAYYRGA GAL+V+D+T+ +FEN+ +W KEL++H+D IV ML+GNK DL R +S
Sbjct: 1164 ITSAYYRGAAGALIVFDITKQTSFENLAKWYKELQEHSDVQIVTMLIGNKCDLADQRNIS 1223
Query: 138 TEDATAFAERENTFFMETSALESMNVENAFTEVLTQIY 175
+ A+ FA+ + ++ETSAL S NVE AF +++ IY
Sbjct: 1224 KDAASKFAQEYDMAYLETSALHSTNVEQAFHQIIKYIY 1261
>gi|157865435|ref|XP_001681425.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
gi|68124721|emb|CAJ02862.1| putative small GTP-binding protein Rab11 [Leishmania major strain
Friedlin]
Length = 208
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 138/212 (65%), Gaps = 9/212 (4%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++ + FK+VLIGDSGVGKSNL++R+T NEF+ E+ STIGVEF T+S++ + + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIESRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR + I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVV----SRKAL 183
DL HLR V E A FA F+ETSALE NV+ AF + +Y VV +R+A
Sbjct: 122 CDLEHLRVVKKEVADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVVVTPQTREA- 180
Query: 184 EIGDDPAALPKGQTINVGTKDDVSAVKKVGCC 215
D A +G+T+N+ + A K GCC
Sbjct: 181 ----DRTAPKQGRTVNMNPSESQEAKKSGGCC 208
>gi|430811332|emb|CCJ31255.1| unnamed protein product [Pneumocystis jirovecii]
Length = 144
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 40 LESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHV 99
LESKSTIGVEFATRSI+ D K +KAQIWDTAGQERYRAITSAY GAVGALLVYD+++
Sbjct: 12 LESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYV-GAVGALLVYDISKQT 70
Query: 100 TFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALE 159
TFEN++RWLKELRDH DSNIVIMLVGNK+DLRHLRAVST+D F+ F+ETSAL+
Sbjct: 71 TFENIQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVSTDDGKNFSTTNGLSFIETSALD 130
Query: 160 SMNVENAFTEVL 171
S NV+ AF ++L
Sbjct: 131 STNVDCAFQDIL 142
>gi|345311553|ref|XP_001505470.2| PREDICTED: ras-related protein Rab-11B-like [Ornithorhynchus
anatinus]
Length = 165
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 102/109 (93%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDTAGQE 73
VVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATRSI+ D K +KAQIWDTAGQE
Sbjct: 9 LSVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 68
Query: 74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIM 122
RYRAITSAYYRGAVGALLVYD+ +H+T+ENVERWLKELRDH D+NIVI+
Sbjct: 69 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVII 117
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 126/186 (67%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I DK VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF+++ RWL+E R H+ SN+VIML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIGNKND 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ AFA++ FMETSA + NVE AF +I+ + +++ ++
Sbjct: 123 LEHRRAVSTEEGKAFADKHGLIFMETSAKTAYNVEQAFINTAEEIHGNIVSGKIDVSNES 182
Query: 190 AALPKG 195
+ G
Sbjct: 183 FGIKVG 188
>gi|146079278|ref|XP_001463744.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|398011473|ref|XP_003858932.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
gi|134067831|emb|CAM66111.1| putative small GTP-binding protein Rab11 [Leishmania infantum
JPCM5]
gi|322497143|emb|CBZ32214.1| small GTP-binding protein Rab11, putative [Leishmania donovani]
Length = 208
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 133/209 (63%), Gaps = 3/209 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIW 67
++ + FK+VLIGDSGVGKSNL++R+T NEF+ E+ STIGVEF T+S++ + K QIW
Sbjct: 2 EETNLSFKIVLIGDSGVGKSNLMTRYTTNEFNQETPSTIGVEFMTKSVKIQSRDAKIQIW 61
Query: 68 DTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNK 127
DTAGQER+RAI+ + Y GA GA+LVYD+T +F+++ WL+ELR + I L+GNK
Sbjct: 62 DTAGQERFRAISRSIYHGAKGAMLVYDITNQTSFDSIPTWLQELRVFVPATCCIFLIGNK 121
Query: 128 ADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGD 187
DL HLR V E A FA F+ETSALE NV+ AF + +Y VV D
Sbjct: 122 CDLEHLRVVKKEAADRFARENGLSFLETSALERTNVDKAFEWLAKSVYEVVVTPQTREAD 181
Query: 188 DPAALPK-GQTINVGTKDDVSAVKKVGCC 215
A PK G+T+N+ + K GCC
Sbjct: 182 RTA--PKQGRTVNMNPSESPETKKTSGCC 208
>gi|224124750|ref|XP_002329939.1| predicted protein [Populus trichocarpa]
gi|118484431|gb|ABK94092.1| unknown [Populus trichocarpa]
gi|222871961|gb|EEF09092.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 133/210 (63%), Gaps = 4/210 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKSD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALP---KGQTINVGTKDDVSAVKKVGCCS 216
+ G + G +D SA + GCCS
Sbjct: 183 YGIKVGYGGIPGSSGGRDGASA-QAGGCCS 211
>gi|225447452|ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFISTASTIYKKIQEGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D S+ + GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIRTASTIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D +A + GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGAASQGGGCCS 211
>gi|224089509|ref|XP_002308739.1| predicted protein [Populus trichocarpa]
gi|118487262|gb|ABK95459.1| unknown [Populus trichocarpa]
gi|222854715|gb|EEE92262.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D + + GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGGSAQAGGCCS 211
>gi|449443494|ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D + + GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGATAQSGGCCS 211
>gi|378755008|gb|EHY65036.1| GTP-binding protein ypt3 [Nematocida sp. 1 ERTm2]
Length = 210
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 145/214 (67%), Gaps = 13/214 (6%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R + +Y+YL+K+VLIGDSGVGK+NLL R N F+ +KSTIGVEF T+ + K +KA
Sbjct: 7 REEQEYEYLYKIVLIGDSGVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKA 66
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE-RWLKELRDHTDSNIVIML 123
QIWDTAGQERYRAITSAYYRGAVGA++VYD++R TF+N W+K+L+D+++S +VI L
Sbjct: 67 QIWDTAGQERYRAITSAYYRGAVGAIVVYDISRKETFDNARTEWIKQLKDNSESGLVISL 126
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNK DL R VS ++A A+ ETSAL +NV+ AF ++ +IY+ +
Sbjct: 127 VGNKTDLNEKRQVSLQEAREAAQIGGYQLTETSALSDVNVQEAFETLIQKIYQTRA---- 182
Query: 184 EIGDDPAALPKGQTINVGTKDDVSAVKKVG--CC 215
G+ +A PK IN+ +D +A+K CC
Sbjct: 183 --GERHSA-PKQDIINL---EDDAAMKASNSWCC 210
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +K +K QIWDT
Sbjct: 3 YAYLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIGNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +SN+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLATWLEDARQHANSNMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FMETSA + NVE AF +IY+ + ++ ++
Sbjct: 123 LDHRRAVSTEEGAQFAKEHGLVFMETSAKTAQNVEEAFINTAAKIYQKIEEGIFDVSNET 182
Query: 190 AALP----KGQTINVGTKDDVSAVKKVGCCS 216
+ + G ++D +A + GCC+
Sbjct: 183 SGIKVGYGGGAGTAGSVRNDYTAPQSSGCCN 213
>gi|388495178|gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K VK QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPVKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D + GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gi|367060765|gb|AEX11197.1| hypothetical protein 0_12402_01 [Pinus taeda]
gi|367060767|gb|AEX11198.1| hypothetical protein 0_12402_01 [Pinus taeda]
gi|367060769|gb|AEX11199.1| hypothetical protein 0_12402_01 [Pinus taeda]
gi|367060771|gb|AEX11200.1| hypothetical protein 0_12402_01 [Pinus taeda]
Length = 136
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 117/137 (85%), Gaps = 3/137 (2%)
Query: 81 AYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSTED 140
AYYRGAVGALLVYD+TRHVTFENVERW KEL+DHTD NIV+MLVGNK+DL HLRAVS E+
Sbjct: 1 AYYRGAVGALLVYDITRHVTFENVERWYKELKDHTDVNIVVMLVGNKSDLLHLRAVSVEE 60
Query: 141 ATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP-AALP-KGQTI 198
+FAERE+ +FMETSAL+S NVEN+FT+VLTQIYR+VS+++L+ ++ + LP KGQ+I
Sbjct: 61 GKSFAERESLYFMETSALDSTNVENSFTQVLTQIYRIVSKRSLDTAEEALSTLPGKGQSI 120
Query: 199 NVGTKDDVSAVKKVGCC 215
+V KD+ + KK GCC
Sbjct: 121 SVNGKDEFTT-KKAGCC 136
>gi|428186007|gb|EKX54858.1| hypothetical protein GUITHDRAFT_149882 [Guillardia theta CCMP2712]
Length = 207
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 131/207 (63%), Gaps = 3/207 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARRITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H++SN+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMTIMLIGNKSD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAV+ + AFA F+ETSA + NVE AF QIY + ++ ++
Sbjct: 123 LEHRRAVTYAEGEAFARENGLIFLETSAKTAHNVEEAFVNTAKQIYAKIQEGVFDVTNES 182
Query: 190 AALPKGQT-INVGTKDDVSAVKKVGCC 215
+ G T N G+ D +K GCC
Sbjct: 183 FGIRVGVTSPNQGSGGD--GQRKGGCC 207
>gi|351726934|ref|NP_001238167.1| guanine nucleotide regulatory protein [Glycine max]
gi|1208537|gb|AAA90955.1| guanine nucleotide regulatory protein [Glycine max]
Length = 211
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 127/209 (60%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL+ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEHARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D + GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 129/207 (62%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + D + +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVS E+ FA+ F+E SA + NVE AF + +I + + ++ ++
Sbjct: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSNES 182
Query: 190 AALPKGQTINVGTKDDVSAVKKVGCCS 216
+ + G G D + ++ GCC+
Sbjct: 183 SGIKVGYGRPQGPSGDGTVSQRGGCCN 209
>gi|356555789|ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D + GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gi|357448155|ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago truncatula]
gi|124360890|gb|ABN08862.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|217075310|gb|ACJ86015.1| unknown [Medicago truncatula]
gi|355483401|gb|AES64604.1| Small GTP binding protein Rab2 [Medicago truncatula]
Length = 211
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 130/210 (61%), Gaps = 4/210 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSNES 182
Query: 190 AALP---KGQTINVGTKDDVSAVKKVGCCS 216
+ G G +D SA GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSAAGG-GCCS 211
>gi|388493968|gb|AFK35050.1| unknown [Medicago truncatula]
Length = 211
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 130/210 (61%), Gaps = 4/210 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLIFMEASAKTTQNVEEAFIKTAGTIYKKIQDGVFDVSNES 182
Query: 190 AALP---KGQTINVGTKDDVSAVKKVGCCS 216
+ G G +D SA GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPSAAGG-GCCS 211
>gi|15235981|ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
gi|297800394|ref|XP_002868081.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|75279776|sp|P92963.1|RAB1C_ARATH RecName: Full=Ras-related protein RABB1c; Short=AtRABB1c; AltName:
Full=Ras-related protein Rab2A; Short=AtRab2A
gi|1765896|emb|CAA70498.1| Rab2-like protein [Arabidopsis thaliana]
gi|5281023|emb|CAB45962.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|27311815|gb|AAO00873.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis thaliana]
gi|297313917|gb|EFH44340.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|332658457|gb|AEE83857.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
Length = 211
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D S + GCC
Sbjct: 183 YGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211
>gi|168046616|ref|XP_001775769.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162672921|gb|EDQ59452.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 212
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 134/210 (63%), Gaps = 3/210 (1%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +SN+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHANSNMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FMETSA + NVE+AF +IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKENGLVFMETSAKTAQNVEDAFINTAAKIYQKIEEGIFDVSNES 182
Query: 190 AALPKGQT---INVGTKDDVSAVKKVGCCS 216
+ G + + GT ++ + GCCS
Sbjct: 183 YGIKVGYSTWTASGGTGGGNTSAQSGGCCS 212
>gi|449434064|ref|XP_004134816.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT N F TIGVEF R I ++K +K QIWDT
Sbjct: 3 YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNKSD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + I++ + ++ ++
Sbjct: 123 LAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G + S+ + GCCS
Sbjct: 183 YGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
>gi|387592730|gb|EIJ87754.1| GTPase Ypt3 [Nematocida parisii ERTm3]
gi|387595356|gb|EIJ92980.1| GTPase Ypt3 [Nematocida parisii ERTm1]
Length = 206
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 144/214 (67%), Gaps = 13/214 (6%)
Query: 5 RADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKA 64
R + +Y+YL+K+VLIGDS VGK+NLL R N F+ +KSTIGVEF T+ + K +KA
Sbjct: 3 REEQEYEYLYKIVLIGDSSVGKTNLLERLAHNRFNTNTKSTIGVEFDTKCFVVNGKKIKA 62
Query: 65 QIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVE-RWLKELRDHTDSNIVIML 123
QIWDTAGQERYRAITSAYYRGAVGA++VYD+TR +F+N W+K+L+D+++S +VI L
Sbjct: 63 QIWDTAGQERYRAITSAYYRGAVGAIVVYDITRKESFDNARTEWIKQLKDNSESGLVISL 122
Query: 124 VGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKAL 183
VGNK DL R VS ++A A+ + ETSAL +NV+ AF ++ +IY+ +R A
Sbjct: 123 VGNKTDLEEKRQVSQQEAREAAQIGDYLLTETSALSDVNVQEAFEALIKKIYQ--TRTA- 179
Query: 184 EIGDDPAALPKGQTINVGTKDDVSAVKKVG--CC 215
+ PK IN+ +D S++K CC
Sbjct: 180 ----ERNNGPKPSIINL---EDDSSMKASSSWCC 206
>gi|340508405|gb|EGR34115.1| Ras-related protein Rab11c, putative [Ichthyophthirius multifiliis]
Length = 303
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 131/168 (77%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWD 68
+YD+LFK+VL+GD VGKSN+LSRFTR +F +++ STIGVEFA R I +DKI++ QIWD
Sbjct: 9 NYDFLFKIVLVGDIAVGKSNILSRFTREDFQIDNTSTIGVEFANRVITAEDKIIQLQIWD 68
Query: 69 TAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKA 128
TAGQE ++A+T Y+RGA+GA+L+YD+++ TF++ E+WL+ ++D+ + + I+LVGNK
Sbjct: 69 TAGQETFKAVTQQYFRGAIGAMLIYDISKKSTFQSCEQWLQMIKDYGEKHTQILLVGNKC 128
Query: 129 DLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYR 176
DL +LRAVS +A FA+ ++E SALE +N++ AFT++++ ++
Sbjct: 129 DLINLRAVSLNEACDFAQACGIQYIEVSALEDVNIDTAFTQLVSGFFK 176
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 5/211 (2%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H++SN+VIML+GNK+D
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L R V E+ AFA FMETSA + NVE AF +IY + +I ++
Sbjct: 123 LDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 190 AALPKGQ-----TINVGTKDDVSAVKKVGCC 215
+ GQ + ++G+ + GCC
Sbjct: 183 NGIKIGQQHSPTSPSLGSGNSPGGPASSGCC 213
>gi|255637328|gb|ACU18994.1| unknown [Glycine max]
Length = 211
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 127/209 (60%), Gaps = 2/209 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H ++N+ IML+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVSTE+ FA+ FME SA + NVE AF + IY+ + ++ ++
Sbjct: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
Query: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
+ G G D GCCS
Sbjct: 183 YGIKVGYGGIPGPSGGRDGPFASAGGCCS 211
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 5/211 (2%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I D K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H++SN+VIML+GNK+D
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L R V E+ AFA FMETSA + NVE AF +IY + +I ++
Sbjct: 123 LDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 190 AALPKGQ-----TINVGTKDDVSAVKKVGCC 215
+ GQ ++G+ ++ GCC
Sbjct: 183 NGIKIGQQHSPTNPSLGSGNNPGGQSSSGCC 213
>gi|74831376|emb|CAI39292.1| rab_C68 [Paramecium tetraurelia]
Length = 174
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 125/165 (75%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQI 66
++DYD L K++++GDSGVGK+NL++RF + +F +SK T+GVEF R I K +KAQ+
Sbjct: 4 EEDYDILMKIIIVGDSGVGKTNLVNRFAQQKFLDDSKPTVGVEFFFRHIDIMGKTIKAQV 63
Query: 67 WDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGN 126
WDTAGQE++RAIT YYRGA+GA++ YD+T+ +F NVERW++ELR+H DSN+V+ML+G
Sbjct: 64 WDTAGQEKFRAITYGYYRGALGAMICYDITKEQSFLNVERWIEELREHGDSNLVMMLIGT 123
Query: 127 KADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVL 171
K+DL R V ED T A + N F+ETSAL++ NV AF+ +L
Sbjct: 124 KSDLESKRVVRNEDGTQKALQHNMAFLETSALKAANVGKAFSMLL 168
>gi|413948486|gb|AFW81135.1| hypothetical protein ZEAMMB73_478467 [Zea mays]
Length = 110
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 101/110 (91%)
Query: 108 LKELRDHTDSNIVIMLVGNKADLRHLRAVSTEDATAFAERENTFFMETSALESMNVENAF 167
++ELRDHTD+NIVIMLVGNKADLRHLRAV TEDA AFAEREN FFMETSALE+MNVE AF
Sbjct: 1 MRELRDHTDANIVIMLVGNKADLRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAF 60
Query: 168 TEVLTQIYRVVSRKALEIGDDPAALPKGQTINVGTKDDVSAVKKVGCCSN 217
TEVLTQIY VVS+KAL+IGDDPAA P+GQTI+VG KDDVSAVKK CCS+
Sbjct: 61 TEVLTQIYHVVSKKALDIGDDPAAPPRGQTISVGGKDDVSAVKKSACCSS 110
>gi|348684558|gb|EGZ24373.1| hypothetical protein PHYSODRAFT_483962 [Phytophthora sojae]
Length = 210
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 134/208 (64%), Gaps = 2/208 (0%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRCDDKIVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I ++K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIWDT 62
Query: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ RWL+E R +++SN+ IML+GNK+D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNKSD 122
Query: 130 LRHLRAVSTEDATAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEIGDDP 189
L H RAVS ++ FA+ F+ETSA + NVE+AF + ++IY + ++ ++
Sbjct: 123 LEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTNEA 182
Query: 190 AALPKGQTINVGTK--DDVSAVKKVGCC 215
+ G T + G + + GCC
Sbjct: 183 HGIKVGMTGSPGPGGFGNSNPPANRGCC 210
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,064,212,489
Number of Sequences: 23463169
Number of extensions: 109534619
Number of successful extensions: 589480
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16640
Number of HSP's successfully gapped in prelim test: 7889
Number of HSP's that attempted gapping in prelim test: 552673
Number of HSP's gapped (non-prelim): 25434
length of query: 217
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 80
effective length of database: 9,144,741,214
effective search space: 731579297120
effective search space used: 731579297120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)