BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027863
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XF89|CB5_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis
thaliana GN=LHCB5 PE=2 SV=1
Length = 280
Score = 270 bits (689), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 156/196 (79%), Positives = 172/196 (87%), Gaps = 3/196 (1%)
Query: 12 ASIGAKEMLGNPLNVSSAVRTSAPGASNPSTFKPVALFSKKKAAPPAKSKPVAVSPVNEE 71
AS+G EMLG PLN + R+SAP AS+PSTFK VALFSKKK A +K AVS ++E
Sbjct: 2 ASLGVSEMLGTPLNFRAVSRSSAPLASSPSTFKTVALFSKKKPA---PAKSKAVSETSDE 58
Query: 72 LAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHA 131
LAKWYGPDRRIFLP+GLLDRSEIPEYL GEV GDYGYDPFGL KKP++F+KYQA+ELIHA
Sbjct: 59 LAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHA 118
Query: 132 RWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAE 191
RWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLV AV+AE
Sbjct: 119 RWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAE 178
Query: 192 IVLVGGAEYYRITNGF 207
+VL+GGAEYYRITNG
Sbjct: 179 VVLLGGAEYYRITNGL 194
>sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Dunaliella tertiolecta PE=2 SV=1
Length = 253
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 91/160 (56%), Gaps = 5/160 (3%)
Query: 50 SKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYD 109
S KA +++ ++ V ++YGPDR FL G ++ PEYLTGE PGDYG+D
Sbjct: 8 SGLKALNIRQTRQQRMATVPRAAVEFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWD 65
Query: 110 PFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLD 169
GLS P F++Y+ ELIHARWA+LGA G + PE +++ E VWFK GA +
Sbjct: 66 TAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFA 125
Query: 170 GNTLNYFGKNIPIN---LVFAVIAEIVLVGGAEYYRITNG 206
LNY G I+ ++ + ++VL+G AE YR G
Sbjct: 126 DGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGG 165
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 182 FDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFV 217
>sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB1R PE=2 SV=2
Length = 265
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 104/191 (54%), Gaps = 15/191 (7%)
Query: 19 MLGNPLNVSSAVRTSAPGASNPSTFKPVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGP 78
M + +SS V A +++ + F + +K AA P KP A S + WYG
Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKP---KPAASSG-----SPWYGA 52
Query: 79 DRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGA 138
DR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA
Sbjct: 53 DRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 109
Query: 139 AGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLV 195
G + PE + G G EAVWFK G+ + L+Y G I + A+ A ++VL+
Sbjct: 110 LGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLM 168
Query: 196 GGAEYYRITNG 206
G E YRI G
Sbjct: 169 GAVEGYRIAGG 179
Score = 31.6 bits (70), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas moewusii PE=2 SV=1
Length = 256
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 91/168 (54%), Gaps = 7/168 (4%)
Query: 47 ALFSKKKAAPPAK-SKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGD 105
AL K +AA A +K +P +WYGPDR +L + P YLTGE PGD
Sbjct: 10 ALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGP---FSTNTPAYLTGEFPGD 66
Query: 106 YGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGA 165
YG+D GLS P+ F KY+ E+IHARWA+LGA G + PE + + E VWFK GA
Sbjct: 67 YGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGA 126
Query: 166 LLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGFGGQ 210
+ L+Y G I N+V + ++VL+G E YR+ G G+
Sbjct: 127 QIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGE 174
Score = 34.3 bits (77), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 103 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
PG+ +DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 181 PGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFV 220
>sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum
GN=CAB8 PE=1 SV=1
Length = 268
Score = 113 bits (283), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 105/191 (54%), Gaps = 20/191 (10%)
Query: 20 LGNPLNVSSAVRTSAPGASNPSTFK-PVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGP 78
L +P V TSA NPS+ + A F+ +K+A +K VA S + WYGP
Sbjct: 8 LSSPTLTGKPVETSA----NPSSQELGGARFTMRKSA---TTKKVASSG-----SPWYGP 55
Query: 79 DRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGA 138
DR +L E P YLTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA
Sbjct: 56 DRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGA 112
Query: 139 AGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLV 195
G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A +++L+
Sbjct: 113 LGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILM 171
Query: 196 GGAEYYRITNG 206
G E YRI G
Sbjct: 172 GAVEGYRIAGG 182
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 197 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 232
>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp.
GN=CAB25 PE=3 SV=1
Length = 266
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE F + G G EAVWFK G+ + L+Y G
Sbjct: 91 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFSEGGLDYLGN 149
Query: 179 N--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + A+ A ++VL+G E YR+ G
Sbjct: 150 PSLVHAQSILAIWACQVVLMGAVEGYRVAGG 180
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2
SV=1
Length = 265
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQ 164
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YRI G
Sbjct: 165 VVLMGAVEGYRIAGG 179
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F + + EL R AML GF +
Sbjct: 194 FDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFV 229
>sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 member 1B, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 274
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 89/163 (54%), Gaps = 14/163 (8%)
Query: 47 ALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDY 106
A + +KA + + SP WYGPDR ++L E P YLTGE PGDY
Sbjct: 37 ARVTMRKATTKKLTASASTSP-------WYGPDRVLYLGP---FSGEPPSYLTGEFPGDY 86
Query: 107 GYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGAL 166
G+D GLS P++F+K + E+IH RWAMLGA G + PE + G G EAVWFK GA
Sbjct: 87 GWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQ 145
Query: 167 LLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ L+Y G + + A+ A +++L+G E YRI G
Sbjct: 146 IFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGG 188
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 203 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 238
>sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum
sativum GN=AB80 PE=1 SV=1
Length = 269
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 98/172 (56%), Gaps = 16/172 (9%)
Query: 39 NPSTFK-PVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEY 97
NPS+ + A F+ +K+A +K VA S + WYGPDR +L E P Y
Sbjct: 24 NPSSQELGAARFTMRKSA---TTKKVASSG-----SPWYGPDRVKYLGP---FSGESPSY 72
Query: 98 LTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPE 157
LTGE PGDYG+D GLS P+ FSK + E+IH+RWAMLGA G + PE ++ G G E
Sbjct: 73 LTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-E 131
Query: 158 AVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
AVWFK G+ + L+Y G + + A+ A +++L+G E YRI G
Sbjct: 132 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGG 183
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 198 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 233
>sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 member 1A, chloroplastic
OS=Pinus sylvestris PE=2 SV=1
Length = 278
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 62 WYGPDRVLYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK GA + L+Y G + I + A+ A +
Sbjct: 119 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQ 177
Query: 192 IVLVGGAEYYRITNG 206
++L+G E YR+ G
Sbjct: 178 VILMGAIEGYRVAGG 192
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 207 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 242
>sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus
pyrifolia PE=2 SV=1
Length = 278
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 62 WYGPDRVMYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 118
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK GA + L+Y G + I + A+ A +
Sbjct: 119 MLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQ 177
Query: 192 IVLVGGAEYYRITNG 206
++L+G E YR+ G
Sbjct: 178 VILMGAIEGYRVAGG 192
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F+ + E+ + R AM GF +
Sbjct: 207 FDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFV 242
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays
GN=CAB-M9 PE=2 SV=1
Length = 265
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 82/135 (60%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR ++L G L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQ 164
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 165 VVLMGAIEGYRVAGG 179
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F+ + EL + R AM GF +
Sbjct: 194 FDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFV 229
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp.
GN=CAB22R PE=3 SV=1
Length = 267
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 13/151 (8%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KP + S + WYGPDR +L E P YLTGE P DYG+D GLS P+
Sbjct: 41 KAKPASSS------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPSDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE F + G G EAVWFK GA + L+Y G
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFG-EAVWFKAGAQIFSEGGLDYLGN 150
Query: 179 N--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + A+ A ++VL+G E YR+ G
Sbjct: 151 PSLVHAQSILAIWACQVVLMGAVEGYRVAGG 181
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays
GN=CAB1 PE=3 SV=1
Length = 262
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 46 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 102
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE ++ G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 103 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQ 161
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YRI G
Sbjct: 162 VVLMGAVEGYRIAGG 176
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 191 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 226
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana
tabacum GN=CAB16 PE=2 SV=1
Length = 266
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 86/152 (56%), Gaps = 13/152 (8%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
+K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P
Sbjct: 39 SKAKPVSSG------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADP 89
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 177
+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLG 148
Query: 178 KN--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + A+ A ++VL+G E YR+ G
Sbjct: 149 NPSLVHAQSILAIWACQVVLMGAVEGYRVAGG 180
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana
tabacum GN=CAB21 PE=2 SV=1
Length = 265
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
Query: 60 SKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDD 119
+KPVA S + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 AKPVASS------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPET 90
Query: 120 FSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN 179
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 91 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNP 149
Query: 180 --IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + A+ A +++L+G E YR+ G
Sbjct: 150 SLVHAQSILAIWACQVILMGAVEGYRVAGG 179
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum
lycopersicum GN=CAB3C PE=3 SV=1
Length = 267
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YRI G
Sbjct: 167 VVLMGAVEGYRIAGG 181
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium
hirsutum GN=CAB-151 PE=2 SV=2
Length = 265
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L +IP YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRPKYLGP---FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-E 191
MLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 106 MLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQ 164
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 165 VVLMGFVEGYRVGGG 179
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic
OS=Polystichum munitum GN=CABF3 PE=3 SV=1
Length = 265
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 93/169 (55%), Gaps = 7/169 (4%)
Query: 41 STFKPVALFSKKKAAPPAKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTG 100
KPV S+K A A+ + +A + WYG DR ++L G S P YL+G
Sbjct: 15 QQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYL--GPFSGSP-PSYLSG 71
Query: 101 EVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVW 160
E PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE K G G EAVW
Sbjct: 72 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFG-EAVW 130
Query: 161 FKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
FK G+ + L+Y G + + A+ A +++L+G E YR+ G
Sbjct: 131 FKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 194 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 229
>sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=CAB2R PE=2 SV=2
Length = 261
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
AK KP A + WYG DR ++L G L E P YLTGE PGDYG+D GLS P
Sbjct: 34 AKPKPAASG------SPWYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 84
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 177
+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 85 ETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLG 143
Query: 178 KN--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
I + A+ A ++VL+G E YRI G
Sbjct: 144 NPSLIHAQSILAIWAVQVVLMGAVEGYRIAGG 175
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 190 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 225
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum
lycopersicum GN=CAB1B PE=3 SV=1
Length = 265
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 49 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 106 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 164
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YRI G
Sbjct: 165 VVLMGAVEGYRIAGG 179
Score = 32.0 bits (71), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1
Length = 253
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 74 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
++YGP+R +L G + P YLTGE PGDYG+D GLS P+ F +Y+ ELIHARW
Sbjct: 35 EFYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARW 92
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIA 190
AMLGA G PE K G G EAVWFK GA + L+Y G + N+V
Sbjct: 93 AMLGALGCQTPELLAKSGTKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAV 151
Query: 191 EIVLVGGAEYYRITNGFGGQ 210
+++L+G E YR+ G G+
Sbjct: 152 QVILMGLIEGYRVNGGPAGE 171
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 103 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
PG+ +DP GL+ PD F++ + E+ + R A GF +
Sbjct: 178 PGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFV 217
>sp|P09756|CB23_SOYBN Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max
GN=CAB3 PE=3 SV=1
Length = 263
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 47 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 103
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE ++ G G EAVWFK G+ + L+Y G I + A+ A +
Sbjct: 104 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQ 162
Query: 192 IVLVGGAEYYRITNG 206
++L+G E YRI G
Sbjct: 163 VILMGAVEGYRIAGG 177
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 192 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 227
>sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII type I, chloroplastic
(Fragment) OS=Cucumis sativus PE=2 SV=1
Length = 255
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 39 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 95
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 96 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 154
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YRI G
Sbjct: 155 VVLMGAVEGYRIAGG 169
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 184 FDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV 219
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana
tabacum GN=CAB50 PE=2 SV=1
Length = 267
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 167 VVLMGAVEGYRVAGG 181
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana
tabacum GN=CAB40 PE=2 SV=1
Length = 267
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 167 VVLMGAVEGYRVAGG 181
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana
tabacum GN=CAB7 PE=3 SV=1
Length = 267
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 13/151 (8%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGN 150
Query: 179 N--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + A+ A ++VL+G E YR+ G
Sbjct: 151 PSLVHAQSILAIWACQVVLMGAIEGYRVAGG 181
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp.
GN=CAB13 PE=3 SV=1
Length = 266
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPA 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RW MLGA G + PE F + G G EAVWFK G+ + L+Y G
Sbjct: 91 TFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFG-EAVWFKAGSQIFKEGGLDYLGN 149
Query: 179 N--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + A+ A ++VL+G E YR+ G
Sbjct: 150 PSLVHAQSILAIWACQVVLMGAVEGYRVAGG 180
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFV 230
>sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp.
GN=CAB22L PE=3 SV=1
Length = 267
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 85/151 (56%), Gaps = 13/151 (8%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE F + G G EAVW K G+ + L+Y G
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFG-EAVWLKAGSQIFSEGGLDYLGN 150
Query: 179 N--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + A+ A +++L+G E YR+ G
Sbjct: 151 PSLVHAQSILAIWACQVLLMGAVEGYRVAGG 181
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E + R AM GF I
Sbjct: 196 FDPLGLAEDPEAFAELKVKETKNGRLAMFSMFGFFI 231
>sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea
PE=1 SV=1
Length = 267
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 51 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 107
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 108 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQ 166
Query: 192 IVLVGGAEYYRITNG 206
++L+G E YRI G
Sbjct: 167 VILMGAVEGYRIAGG 181
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare
GN=CAB2 PE=3 SV=1
Length = 264
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 48 WYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWA 104
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK--NIPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L Y G + + A+ A +
Sbjct: 105 MLGALGCVFPELLARNGVKFG-EAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQ 163
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 164 VVLMGAVEGYRVAGG 178
>sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens
GN=LHC0 PE=1 SV=1
Length = 264
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 84/148 (56%), Gaps = 14/148 (9%)
Query: 62 PVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFS 121
PV+ SP WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+
Sbjct: 42 PVSDSP-------WYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 91
Query: 122 KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN-- 179
K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 92 KNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSL 150
Query: 180 IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + ++ A +++L+G E YR+ G
Sbjct: 151 VHAQSILSIWATQVILMGAVEGYRVAGG 178
>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene
pratensis PE=2 SV=2
Length = 205
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L + P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA
Sbjct: 48 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 104
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE K G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 105 MLGALGCVFPELLAKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQ 163
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 164 VVLMGAVEGYRVGGG 178
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABE PE=3 SV=1
Length = 266
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 13/148 (8%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D GLS P+
Sbjct: 40 KAKPVSSG------SPWYGPDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPE 90
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 91 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGN 149
Query: 179 N--IPINLVFAVIA-EIVLVGGAEYYRI 203
+ + A+ A ++VL+G E YR+
Sbjct: 150 PSLVHAQSILAIWACQVVLMGAVEGYRV 177
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana
plumbaginifolia GN=CABC PE=3 SV=1
Length = 267
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
+K+KPV+ S + WYGP+R +L E P YLTGE PGDYG+D GLS P
Sbjct: 40 SKAKPVSSS------SPWYGPNRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADP 90
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 177
+ F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 91 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKGGSQIFSQGGLDYLG 149
Query: 178 KN--IPINLVFAVIA-EIVLVGGAEYYRI 203
+ + A+ A ++VL+G E YR+
Sbjct: 150 NPSLVHAQSILAIWACQVVLMGAVEGYRV 178
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL++ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P12471|CB21_SOYBN Chlorophyll a-b binding protein, chloroplastic (Fragment)
OS=Glycine max PE=2 SV=1
Length = 245
Score = 107 bits (268), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 29 WYGPDRVKYLGP---FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 85
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EA WFK G+ + L+Y G I + A+ A +
Sbjct: 86 MLGALGCVFPELLARNGVKFG-EASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQ 144
Query: 192 IVLVGGAEYYRITNG 206
++L+G E YRI G
Sbjct: 145 VILMGAVEGYRIAGG 159
>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type I, chloroplastic
OS=Lemna gibba PE=3 SV=1
Length = 264
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR FL + P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 48 WYGADRPKFLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 104
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-E 191
MLGA G I PE +K G G EAVWFK GA + L+Y G + + A+ A +
Sbjct: 105 MLGALGCIFPELLSKNGVQFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQ 163
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 164 VVLMGLIEGYRVGGG 178
Score = 31.2 bits (69), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 193 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 228
>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. japonica GN=RCABP89 PE=2 SV=1
Length = 263
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 47 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE +K G G EAVWFK GA + L+Y G + + A+ A +
Sbjct: 104 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQ 162
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 163 VVLMGFVEGYRVGGG 177
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + EL + R AM GF +
Sbjct: 192 FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV 227
>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_012078 PE=2 SV=1
Length = 263
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYGPDR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 47 WYGPDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 103
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE +K G G EAVWFK GA + L+Y G + + A+ A +
Sbjct: 104 MLGALGCVFPEILSKNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQ 162
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 163 VVLMGFVEGYRVGGG 177
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + EL + R AM GF +
Sbjct: 192 FDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFV 227
>sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp.
GN=CAB91R PE=3 SV=1
Length = 267
Score = 107 bits (266), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 84/151 (55%), Gaps = 13/151 (8%)
Query: 59 KSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPD 118
K+KPV+ + WYGPDR +L E P YLTGE PGDYG+D LS P+
Sbjct: 41 KAKPVSSG------SPWYGPDRVKYLGP---FSGEAPSYLTGEFPGDYGWDTAELSADPE 91
Query: 119 DFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK 178
F+K + E+IH RWAMLGA G + PE + G G EAVWFK G+ + L+Y G
Sbjct: 92 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGN 150
Query: 179 N--IPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ + A+ A ++VL+G E YR+ G
Sbjct: 151 PSLVHAQSILAIWACQVVLMGAVEGYRVAGG 181
Score = 31.6 bits (70), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 196 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 231
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum
GN=WHAB1.6 PE=3 SV=1
Length = 266
Score = 107 bits (266), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 13/152 (8%)
Query: 58 AKSKPVAVSPVNEELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKP 117
AK+K V+ S + WYG DR ++L G L E P YLTGE PGDYG+D GLS P
Sbjct: 39 AKAKQVSSS------SPWYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADP 89
Query: 118 DDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG 177
+ F+K + E+IH RWAMLGA G + PE + G G EA WFK G+ + L+Y G
Sbjct: 90 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAGWFKAGSQIFSDGGLDYLG 148
Query: 178 KNIPIN---LVFAVIAEIVLVGGAEYYRITNG 206
++ L+ ++VL+G E YRI G
Sbjct: 149 NPSLVHAQSLLAIWACQVVLMGAVEGYRIAGG 180
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+++P F++ + E+ + R AM GF +
Sbjct: 195 FDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFV 230
>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum
GN=CAB215 PE=1 SV=1
Length = 265
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 81/136 (59%), Gaps = 9/136 (6%)
Query: 75 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARW 133
WYGPDR P+ L SE IP YLTGE PGDYG+D GLS P+ F++ + E+IH+RW
Sbjct: 49 WYGPDR----PKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRW 104
Query: 134 AMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA- 190
AMLGA G PE K G G EAVWFK G+ + L+Y G I + A+ A
Sbjct: 105 AMLGALGCTFPELLEKNGVKFG-EAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWAT 163
Query: 191 EIVLVGGAEYYRITNG 206
++VL+G E YR+ G
Sbjct: 164 QVVLMGFVEGYRVGGG 179
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + EL + R AM GF +
Sbjct: 194 FDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFV 229
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella
patens subsp. patens PE=3 SV=1
Length = 269
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 26 VSSAVRTSAPGASNPSTFKPVALFSKKK----AAPPAKSKPVAVSPVNEELAKWYGPDRR 81
+++A + + S KPV S+K A + V+ S ++ + WYG DR
Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTI--WYGADRP 58
Query: 82 IFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGF 141
FL E P YL GE GDYG+D GLS P+ F++ + E+IHARWAMLGA G
Sbjct: 59 KFLGP---FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGC 115
Query: 142 IIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGK--NIPINLVFAVIA-EIVLVGGA 198
+ PE K G G EAVWFK GA + L+Y G + + A+ A ++VL+G
Sbjct: 116 LTPELLAKSGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV 174
Query: 199 EYYRITNG 206
E YR+ G
Sbjct: 175 EGYRVAGG 182
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ PD F++ + E+ + R AM GF +
Sbjct: 197 FDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFV 232
>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp.
GN=CAB37 PE=3 SV=1
Length = 265
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH RWA
Sbjct: 49 WYGEDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAV-IAE 191
MLGA G + PE +K G G EAVWFK G+ + L+Y G I + A+ A+
Sbjct: 106 MLGALGCVFPEILSKNGVTFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQ 164
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 165 VVLMGFVEGYRVGGG 179
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P04159|CB21_PEA Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum
GN=AB96 PE=1 SV=1
Length = 228
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 79/135 (58%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
W+GPD +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWA
Sbjct: 12 WHGPDGVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 68
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 69 MLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQ 127
Query: 192 IVLVGGAEYYRITNG 206
++L+G E YRI G
Sbjct: 128 VILMGAVEGYRIAGG 142
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIP 144
+DP GL++ P+ F++ + EL + R AM GF +P
Sbjct: 157 FDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVP 193
>sp|P27489|CB23_SOLLC Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum
lycopersicum GN=CAB13 PE=1 SV=1
Length = 265
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 96/183 (52%), Gaps = 10/183 (5%)
Query: 32 TSAPGASNPSTFKPVALFSKKKAAPPAKSKPVAVSPVNEELAK--WYGPDRRIFLPEGLL 89
+ A AS+ + K + K A P + VA+ ++ WYGPDR +L
Sbjct: 3 SMAATASSTTVVKATPFLGQTKNANPLRDV-VAMGSARFTMSNDLWYGPDRVKYLGPF-- 59
Query: 90 DRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNK 149
++ P YL GE PGDYG+D GLS P+ F+K +A E+IH RWAMLGA G I PE K
Sbjct: 60 -SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEK 118
Query: 150 FGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-EIVLVGGAEYYRITNG 206
+ E VWFK G+ + L+Y G + + AV+ ++VL+G E +RI NG
Sbjct: 119 WVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRI-NG 177
Query: 207 FGG 209
G
Sbjct: 178 LPG 180
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 103 PGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
PG +DP GL+ P F++ + E+ + R AM GF +
Sbjct: 189 PGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana
tabacum GN=CAB36 PE=3 SV=1
Length = 265
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 78/135 (57%), Gaps = 7/135 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L + P YLTGE PGDYG+D GLS P+ F++ + E+IH RWA
Sbjct: 49 WYGEDRPKYLGP---FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWA 105
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFG--KNIPINLVFAVIA-E 191
MLGA G + PE +K G G EAVWFK G+ + L+Y G I + AV A +
Sbjct: 106 MLGALGCVFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQ 164
Query: 192 IVLVGGAEYYRITNG 206
+VL+G E YR+ G
Sbjct: 165 VVLMGLIEGYRVGGG 179
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + E+ + R AM GF +
Sbjct: 194 FDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV 229
>sp|P04778|CB1C_ARATH Chlorophyll a-b binding protein 1, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.3 PE=1 SV=1
Length = 267
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 50 WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 107 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165
Query: 192 IVLVGGAEYYRIT-NGFGGQA 211
++L+G E YR+ NG G+A
Sbjct: 166 VILMGAVEGYRVAGNGPLGEA 186
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV 231
>sp|Q8VZ87|CB1B_ARATH Chlorophyll a-b binding protein 3, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.2 PE=1 SV=2
Length = 267
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 50 WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 107 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165
Query: 192 IVLVGGAEYYRIT-NGFGGQA 211
++L+G E YR+ NG G+A
Sbjct: 166 VILMGAVEGYRVAGNGPLGEA 186
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV 231
>sp|P0CJ48|CB1A_ARATH Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis
thaliana GN=LHCB1.1 PE=1 SV=1
Length = 267
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 82/141 (58%), Gaps = 8/141 (5%)
Query: 75 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWA 134
WYG DR +L E P YLTGE PGDYG+D GLS P+ F++ + E+IH+RWA
Sbjct: 50 WYGSDRVKYLGP---FSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWA 106
Query: 135 MLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-E 191
MLGA G + PE + G G EAVWFK G+ + L+Y G + + A+ A +
Sbjct: 107 MLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQ 165
Query: 192 IVLVGGAEYYRIT-NGFGGQA 211
++L+G E YR+ NG G+A
Sbjct: 166 VILMGAVEGYRVAGNGPLGEA 186
Score = 32.3 bits (72), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 YDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFII 143
+DP GL+ P+ F++ + EL + R AM GF +
Sbjct: 196 FDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,108,259
Number of Sequences: 539616
Number of extensions: 4399061
Number of successful extensions: 10921
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 10536
Number of HSP's gapped (non-prelim): 257
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)