Query 027864
Match_columns 217
No_of_seqs 169 out of 848
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 03:22:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027864.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027864hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u5e_D 60S ribosomal protein L 100.0 3.5E-94 1.2E-98 643.9 14.9 211 1-211 1-212 (297)
2 4a17_M RPL5, 60S ribosomal pro 100.0 1.1E-93 3.7E-98 641.1 13.7 211 1-211 1-217 (301)
3 2zkr_n 60S ribosomal protein L 100.0 4.6E-92 1.6E-96 629.7 16.4 211 1-211 1-212 (297)
4 3iz5_Q 60S ribosomal protein L 100.0 6.8E-92 2.3E-96 629.7 8.0 208 1-211 5-212 (304)
5 1vq8_N 50S ribosomal protein L 100.0 6.9E-63 2.4E-67 419.2 13.0 155 11-211 2-156 (187)
6 3j21_O 50S ribosomal protein L 100.0 7.1E-63 2.4E-67 423.5 8.9 155 11-211 2-157 (203)
7 3r8s_O 50S ribosomal protein L 100.0 1.2E-36 4.1E-41 241.2 8.4 109 28-171 7-115 (116)
8 1ovy_A 50S ribosomal protein L 100.0 1.6E-36 5.6E-41 241.8 6.9 112 25-172 9-120 (120)
9 3v2d_S 50S ribosomal protein L 100.0 6.3E-35 2.2E-39 230.3 10.7 107 25-171 5-111 (112)
10 2zjr_L 50S ribosomal protein L 100.0 6.4E-35 2.2E-39 230.9 2.2 107 27-172 6-114 (114)
11 3bbo_Q Ribosomal protein L18; 100.0 1.8E-33 6.1E-38 233.9 1.4 115 22-171 43-160 (161)
12 4gmn_B 60S ribosomal protein L 99.9 9.7E-24 3.3E-28 142.9 1.2 44 1-44 1-44 (49)
13 3j20_M 30S ribosomal protein S 96.9 0.0097 3.3E-07 48.0 10.6 105 48-182 14-131 (137)
14 2vqe_K 30S ribosomal protein S 96.6 0.016 5.4E-07 46.2 10.0 101 46-181 14-123 (129)
15 3bbn_K Ribosomal protein S11; 96.0 0.02 6.8E-07 46.3 7.5 101 46-181 27-136 (140)
16 3r8n_K 30S ribosomal protein S 95.9 0.04 1.4E-06 43.1 8.6 100 47-181 5-113 (117)
17 2xzm_K RPS14E; ribosome, trans 95.8 0.031 1.1E-06 45.8 8.0 106 48-181 28-144 (151)
18 3u5c_O RP59A, 40S ribosomal pr 95.2 0.039 1.3E-06 44.5 6.4 106 48-181 14-130 (137)
19 2fqx_A Membrane lipoprotein TM 24.0 60 0.002 27.3 3.6 56 92-174 107-163 (318)
20 1frr_A Ferredoxin I; electron 20.9 24 0.00082 24.8 0.4 16 160-175 22-37 (95)
21 1frd_A Heterocyst [2Fe-2S] fer 20.6 24 0.00084 25.0 0.4 16 160-175 25-40 (98)
No 1
>3u5e_D 60S ribosomal protein L5; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_D 4b6a_D 3izc_Q 3izs_Q 3o58_E 3o5h_E 3jyw_E 1s1i_E
Probab=100.00 E-value=3.5e-94 Score=643.88 Aligned_cols=211 Identities=60% Similarity=0.978 Sum_probs=206.9
Q ss_pred CceeeeeccccccccccccccccccCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEec
Q 027864 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYA 80 (217)
Q Consensus 1 m~~~k~~kn~~y~~r~~vk~RRRregkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS 80 (217)
|+|+|++||+||||||||||||||||||||++|++|++|||||||+++||||||+||+|||||||++.++||+|||||||
T Consensus 1 m~fvkvvknkaYf~ryqvkfRRRReGKTdY~~R~rLi~qdknKynt~kpRLvV~rSNrhIyAQIIdd~~~Gd~tLaSASS 80 (297)
T 3u5e_D 1 MAFQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIICQIISSTITGDVVLAAAYS 80 (297)
T ss_dssp -CCTTSCCCHHHHHTCCCCCSTTTTTCCCHHHHHHHHCCCGGGTTCCCCEEEEEEETTEEEEEEEECCTTCCEEEEEEEG
T ss_pred CCceeeeeccccccccccchhhhccccccHHHHHHHHHccccccCCCCceEEEEEcCCeEEEEEeecCCCCCEEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999997789999999999
Q ss_pred CCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccCcccccccCCC-CCCcEEEEeecccccccCcchh
Q 027864 81 HELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVF 159 (217)
Q Consensus 81 ~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~-~~~~~~vlD~Gl~r~~~g~rV~ 159 (217)
+|++++||+.+++|++|||+||+|||+||+++||||++|+|++++|||+|++|++|+ |+||+|+||+||+|+|+|+|||
T Consensus 81 ~El~k~g~k~~~~N~~AAy~vG~LiAeRAl~k~~ld~~y~G~~e~~g~~~~ve~~~~~~~~f~~~LDvGl~rtttG~RVf 160 (297)
T 3u5e_D 81 HELPRYGITHGLTNWAAAYATGLLIARRTLQKLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVF 160 (297)
T ss_dssp GGGGGGTCCSCTTSHHHHHHHHHHHHHHHHHHTSTTSSCCCCSSCCCCCCCCCCCSSSCCCCBCEEECTTCCCCTTCSHH
T ss_pred cchhhcccCCCCCcHHHHHHHHHHHHHHHHHhhCCcccccCccccccceeccccccCCCCceeEEEecCCCccCccceeh
Confidence 999999998889999999999999999999999999999999999999999999985 9999999999999999999999
Q ss_pred hhhcccccCCccccCCccccCCCCCCcccCCHHhhhccccCchHHHHHHHHH
Q 027864 160 GALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRVSF 211 (217)
Q Consensus 160 a~~kGa~d~GL~iPh~~~~fp~~~~~~~~~~ae~~~~ri~G~hVadY~~~~~ 211 (217)
|+||||+||||+||||+++|||||+|+++||||+|++||+|+||||||++|+
T Consensus 161 aalKGA~DgGL~IPhs~~~fpg~d~e~k~~~ae~~~~~I~G~hVa~Ym~~L~ 212 (297)
T 3u5e_D 161 GALKGASDGGLYVPHSENRFPGWDFETEEIDPELLRSYIFGGHVSQYMEELA 212 (297)
T ss_dssp HHHHHHHHHTCBCCCCSTTSSSEETTTTEECHHHHHHHHTTHHHHHHHHHTT
T ss_pred hhhhcccccCcccCCCcccccCccccccccCHHHHHHHhcCccHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999997
No 2
>4a17_M RPL5, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_M 4a1c_M 4a1e_M
Probab=100.00 E-value=1.1e-93 Score=641.14 Aligned_cols=211 Identities=55% Similarity=0.906 Sum_probs=206.5
Q ss_pred CceeeeeccccccccccccccccccCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEec
Q 027864 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYA 80 (217)
Q Consensus 1 m~~~k~~kn~~y~~r~~vk~RRRregkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS 80 (217)
|+|+|++||+|||+||||||||||||||||++|++|++|||||||+|+||||||+||+|||||||++.++||+|||||||
T Consensus 1 m~fvkvvknkaYf~ryqvkfRRRReGKTdY~~R~rlv~qdknKynspkpRLvV~rSNrhIyAQIIdd~~~Gd~tLaSASS 80 (301)
T 4a17_M 1 MGFVKVLKTKAYFKRFQTKYRRRREGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADS 80 (301)
T ss_dssp -CCCCCCSCHHHHHHCCCCCHHHHTTCCCHHHHHHHHCCCTTSCSCCCEEEEEEECSSCEEEEEEEECSSCEEEEEEEET
T ss_pred CCceeeeeccccccccccchhhcccccccHHHHHHHHHccccccCCCCceEEEEEcCCeEEEEEeecCCCCCEEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999997789999999999
Q ss_pred CCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccCcccccccCCC-CCCcEEEEeecccccccCcchh
Q 027864 81 HELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVF 159 (217)
Q Consensus 81 ~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~-~~~~~~vlD~Gl~r~~~g~rV~ 159 (217)
+|++++||+.+++|++|||+||+|||+||+++||||++|+|++|||||+|+||++|+ |+||+|+||+||+|+|+|+|||
T Consensus 81 ~El~~~g~k~~~~N~~AAy~vG~LiAeRAl~k~~~d~~y~G~~e~~g~~~~ve~~~~~~~~f~~~LD~Gl~rtt~G~RVf 160 (301)
T 4a17_M 81 YELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVF 160 (301)
T ss_dssp THHHHTTCCSCTTSHHHHHHHHHHHHHHHHHHHTCTTTCCCCSSCCCSCCCGGGTCCSSCCCBCEEECTTSCCCSSCHHH
T ss_pred ccchhccccCCCCcHHHHHHHHHHHHHHHHHhcCCcccccCccccccceeecccccCCCCceEEEEecCCcccCcccchh
Confidence 999999998889999999999999999999999999999999999999999999986 9999999999999999999999
Q ss_pred hhhcccccCCccccCCccccCCCCCCc-----ccCCHHhhhccccCchHHHHHHHHH
Q 027864 160 GALKGALDGGLDIPHSEKRFAGFSKDS-----KQLDAEVHRKYIYCGHVAAYMRVSF 211 (217)
Q Consensus 160 a~~kGa~d~GL~iPh~~~~fp~~~~~~-----~~~~ae~~~~ri~G~hVadY~~~~~ 211 (217)
|+||||+||||+||||+++|||||+|+ ++||||+|++||+|+||||||++|+
T Consensus 161 aalKGA~DgGL~IPhs~~~fpg~~~e~~~~~~k~~~ae~~r~~I~G~hVa~Ym~~L~ 217 (301)
T 4a17_M 161 GVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLK 217 (301)
T ss_dssp HHHHHHHHTTCBCCCCSSSSSSEEECCSSCCCEEECHHHHHHHHHTHHHHHHHHHHH
T ss_pred hhhhcccccCcccCCCCccCCCcccccccccccccCHHHHHHHhcCccHHHHHHHhh
Confidence 999999999999999999999999997 9999999999999999999999998
No 3
>2zkr_n 60S ribosomal protein L5; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=4.6e-92 Score=629.72 Aligned_cols=211 Identities=64% Similarity=1.049 Sum_probs=197.1
Q ss_pred CceeeeeccccccccccccccccccCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEec
Q 027864 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYA 80 (217)
Q Consensus 1 m~~~k~~kn~~y~~r~~vk~RRRregkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS 80 (217)
|+|+|++||++|||||||||||||||||||++|+||++||+||||+|+||||||+||+|||||||++.++||+|||||||
T Consensus 1 m~fvkv~kn~aYf~Ryqvk~RRRReGKTdY~~R~rLi~qdknkynt~kpRLvVrrSNk~I~aQII~~~~~gd~tLasAsS 80 (297)
T 2zkr_n 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYA 80 (297)
T ss_dssp ----------CCSTTCCCCCHHHHTTCSCHHHHHHHHCCCSTTCSCCSEEEEEEEETTEEEEEEEECCSSSCEEEEEEEG
T ss_pred CCceeeeeccccccccccchhhhccccchHHHHHHHHhcCCcccCCCCceEEEEEecCcEEEEEEeccCCCCEEEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred CCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccCcccccccCCC-CCCcEEEEeecccccccCcchh
Q 027864 81 HELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTEN-RRPFRALLDVGLVKTTTGNRVF 159 (217)
Q Consensus 81 ~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~-~~~~~~vlD~Gl~r~~~g~rV~ 159 (217)
+||+++||+.+++|++|||+||+|||+||+++||||++|+|++|++||+|++|+.|+ |++|+|+||+||++||+|||||
T Consensus 81 ~El~kyg~k~g~tN~aAAy~tGlLlArRal~k~~ld~~y~G~~e~~g~~~~ve~~~~~~gi~~vvfDrGl~ryttggRVf 160 (297)
T 2zkr_n 81 HELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVF 160 (297)
T ss_dssp GGGGGTCCCSCSSSHHHHHHHHHHHHHHHHCCCSCCCCCSSCCSSSSCCCCCSSSCSSSCCCBEEEECTTSCCCTTCHHH
T ss_pred CcccccccccCCCcHHHHHHHHHHHHHHHHHhhccchhhcCccccccccccccccccCCCceEEEEecCCcccCCCchHH
Confidence 999999999889999999999999999999999999999999999999999999996 9999999999999999999999
Q ss_pred hhhcccccCCccccCCccccCCCCCCcccCCHHhhhccccCchHHHHHHHHH
Q 027864 160 GALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRVSF 211 (217)
Q Consensus 160 a~~kGa~d~GL~iPh~~~~fp~~~~~~~~~~ae~~~~ri~G~hVadY~~~~~ 211 (217)
|+||||+||||+||||+++|||||+|+++||||+|++||+|+||||||+.|+
T Consensus 161 a~akGArDgGL~~Phs~~~fpg~d~e~k~~~ae~~r~rI~G~hVa~Ym~~L~ 212 (297)
T 2zkr_n 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 212 (297)
T ss_dssp HHHHHHHHTTCBCCCCGGGSCCCCCCCCCC-CCCCCSSSSSSHHHHHHHTCS
T ss_pred HHHHHHHhcCcccCCCCccCCCCCccccccCHHHHHHhhCCeeHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999985
No 4
>3iz5_Q 60S ribosomal protein L5 (L18P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Q
Probab=100.00 E-value=6.8e-92 Score=629.72 Aligned_cols=208 Identities=81% Similarity=1.275 Sum_probs=204.5
Q ss_pred CceeeeeccccccccccccccccccCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEec
Q 027864 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYA 80 (217)
Q Consensus 1 m~~~k~~kn~~y~~r~~vk~RRRregkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS 80 (217)
|+|+|++||+||||||||||||||||||||++|++|++|||||||+|+|||| ||+|||||||++.++||+|||||||
T Consensus 5 ~~fvKvvKnkaYf~RyqvkfRRRREGKTdY~~R~rLi~qdknKyntpKpRLV---SNrhIyaQII~~~i~GD~tLaSAsS 81 (304)
T 3iz5_Q 5 GGFVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYS 81 (304)
T ss_dssp SSHHHHTTTBHHHHHHHSSCHHHHHTCCCHHHHHHHHTTSCCEEECCCSSSS---CSSCCEEEEEEEETTEEEEEEEEET
T ss_pred cceeeeeeccccccccccchhhcccccccHHHHHHHHHcCccccCCCCceee---cCCcEEEEEEecCCCCCEEEEEEec
Confidence 8999999999999999999999999999999999999999999999999999 9999999999998889999999999
Q ss_pred CCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccCcccccccCCCCCCcEEEEeecccccccCcchhh
Q 027864 81 HELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFG 160 (217)
Q Consensus 81 ~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a 160 (217)
+||+++||+.+++|++|||+||+|||+||+++||||++|+|++++|||+|+||+.++|+||+|+||+||+|+|+|+||||
T Consensus 82 ~EL~kyG~k~g~~N~aAAy~tGlLiA~RAl~k~~ld~~y~G~~e~~g~~~~ve~~~~~~~f~~~LDiGL~rtttG~RVfa 161 (304)
T 3iz5_Q 82 HELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFG 161 (304)
T ss_dssp TTGGGGSCCSCTTSHHHHHHHHHHHHHHHHTTCSSCCCCCSSSCCCSCCCSSCCSSCSCCCSCEEECTTCCCCSSCHHHH
T ss_pred CchhhcccCCCCCcHHHHHHHHHHHHHHHHHhhCCccccCCccccccceecccccCCCCCceEEEecCCcccccCceeEE
Confidence 99999999989999999999999999999999999999999999999999999955799999999999999999999999
Q ss_pred hhcccccCCccccCCccccCCCCCCcccCCHHhhhccccCchHHHHHHHHH
Q 027864 161 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRVSF 211 (217)
Q Consensus 161 ~~kGa~d~GL~iPh~~~~fp~~~~~~~~~~ae~~~~ri~G~hVadY~~~~~ 211 (217)
+||||+||||+||||+++|||||+|+++||||+|++||+|+|||+||++|+
T Consensus 162 alKGA~DgGL~IPhs~~~fpg~d~e~k~~~aev~~~~I~G~hVa~Ym~~L~ 212 (304)
T 3iz5_Q 162 ALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMA 212 (304)
T ss_dssp HHHHHHTTTCCCCCCSSSCCCGGGTSSCCCCSSSCCSCSSSSTHHHHHSCC
T ss_pred eeccccccCcccCCCcccccCccccccccCHHHHHHHHcCccHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999886
No 5
>1vq8_N 50S ribosomal protein L18P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.55.4.1 PDB: 1vq4_N* 1vq5_N* 1vq6_N* 1vq7_N* 1s72_N* 1vq9_N* 1vqk_N* 1vql_N* 1vqm_N* 1vqn_N* 1vqo_N* 1vqp_N* 1yhq_N* 1yi2_N* 1yij_N* 1yit_N* 1yj9_N* 1yjn_N* 1yjw_N* 2otj_N* ...
Probab=100.00 E-value=6.9e-63 Score=419.23 Aligned_cols=155 Identities=41% Similarity=0.626 Sum_probs=146.6
Q ss_pred cccccccccccccccCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCcccccccc
Q 027864 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEV 90 (217)
Q Consensus 11 ~y~~r~~vk~RRRregkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~ 90 (217)
|..||||||||||||||||||+|+||++++ +|||+||+||+|||||||.++++||+|||||||+|+++++|+.
T Consensus 2 a~g~ry~vk~rrrregkTdy~~R~rl~~~~-------rpRL~V~rSnkhIyAQII~~dd~~~~tlasAsT~e~~k~~~k~ 74 (187)
T 1vq8_N 2 ATGPRYKVPMRRRREARTDYHQRLRLLKSG-------KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEA 74 (187)
T ss_dssp CCSTTCCCCCHHHHTTCCCHHHHHHHHTTC-------SCEEEEEECSSCEEEEEEECCTTSCEEEEEEESGGGGGGTCCS
T ss_pred CCCCcccccccchhccchhHHHHHHHHhcC-------CCEEEEEEeCCcEEEEEEEecCCCCEEEEEEEccchhcccccc
Confidence 457999999999999999999999999998 7999999999999999995445799999999999999888866
Q ss_pred CCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCc
Q 027864 91 GLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGL 170 (217)
Q Consensus 91 ~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL 170 (217)
+++|++|||+||+|||+||+++ ||++ |+||+|+++||+||||||+|+||+|+||
T Consensus 75 ~~~N~~AA~~vG~llA~Ral~k--------GI~~------------------vvfDrgg~~yh~GgRV~Ala~gAre~GL 128 (187)
T 1vq8_N 75 PTGNMPSAYLTGLLAGLRAQEA--------GVEE------------------AVLDIGLNSPTPGSKVFAIQEGAIDAGL 128 (187)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHT--------TCCB------------------CEEECTTSCCCTTCHHHHHHHHHHHTTC
T ss_pred CCCcHHHHHHHHHHHHHHHHHC--------CCCE------------------EEEcCCCceeccchHHHHHHHHhhcCCE
Confidence 7899999999999999999999 9998 9999999999999999999999999999
Q ss_pred cccCCccccCCCCCCcccCCHHhhhccccCchHHHHHHHHH
Q 027864 171 DIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRVSF 211 (217)
Q Consensus 171 ~iPh~~~~fp~~~~~~~~~~ae~~~~ri~G~hVadY~~~~~ 211 (217)
++|||+++|||| +||+|+||||||+.|.
T Consensus 129 ~fph~~~~fp~~-------------~ri~G~hva~y~~~l~ 156 (187)
T 1vq8_N 129 DIPHNDDVLADW-------------QRTRGAHIAEYDEQLE 156 (187)
T ss_dssp BCCCCGGGSCCH-------------HHHHTHHHHHHHHSCS
T ss_pred eccCCCccCCCC-------------ceeccEEHHHHHHHhh
Confidence 999999999995 5999999999999874
No 6
>3j21_O 50S ribosomal protein L18P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=7.1e-63 Score=423.54 Aligned_cols=155 Identities=41% Similarity=0.590 Sum_probs=148.2
Q ss_pred cccccccccccccccCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCcc-ccccc
Q 027864 11 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELP-RYGLE 89 (217)
Q Consensus 11 ~y~~r~~vk~RRRregkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~-k~g~k 89 (217)
|-.||||||||||||||||||+|+||++|+ +|||+||+||+||||||||++++||+|||||||+|++ +++|+
T Consensus 2 a~g~ry~vk~rrRregkt~y~~R~rl~~~~-------kpRL~V~rSnkhIyAQIId~d~~g~~tLasAST~El~lk~g~~ 74 (203)
T 3j21_O 2 AHGPRYRVPFRRRREGKTNYRKRLKLLKSG-------KPRLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDFGWK 74 (203)
T ss_dssp TTTTCSCCCCHHHHHTCCCHHHHHHHHTTC-------CCEEEEEECSSCEEEEEEECCTTSCEEEEEECSTTTSSSSSCC
T ss_pred CCCCccccchhhHHHHhHHHHHHHHHHhcC-------CCEEEEEEeCCeEEEEEEEecCCCCeEEEEEEccchhhhhccc
Confidence 457999999999999999999999999999 7999999999999999999656899999999999999 78988
Q ss_pred cCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCC
Q 027864 90 VGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGG 169 (217)
Q Consensus 90 ~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~G 169 (217)
.+++|++|||+||+|||+||+++ ||++ |+||+|+++||+||||||+||||+|+|
T Consensus 75 ~~~~N~~AA~~vG~llA~Ral~k--------GI~~------------------vvfDrgg~~y~~hgRV~Ala~gAre~G 128 (203)
T 3j21_O 75 GHCGNTPSAYLLGLLIGYKAKQA--------GIEE------------------AILDIGLHPPVRGSSVFAVLKGAVDAG 128 (203)
T ss_dssp SCTTSHHHHHHHHHHSSSSTTSS--------CCCC------------------CEEECCSSCCCTTSHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHHHHHHHHHHhC--------CCCE------------------EEEecCcceeccCcchhhhhhhcccCC
Confidence 88999999999999999999999 9998 999999999999999999999999999
Q ss_pred ccccCCccccCCCCCCcccCCHHhhhccccCchHHHHHHHHH
Q 027864 170 LDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRVSF 211 (217)
Q Consensus 170 L~iPh~~~~fp~~~~~~~~~~ae~~~~ri~G~hVadY~~~~~ 211 (217)
|+||||+++|||+ +||+|+||||||++|+
T Consensus 129 L~iPhs~~~fp~~-------------~ri~G~hva~y~~~L~ 157 (203)
T 3j21_O 129 LNVPHSPEIFPDE-------------YRIRGEHIAEYAKMLK 157 (203)
T ss_dssp CCCCCCSSCSCCH-------------HHHHTCHHHHHHHHCC
T ss_pred eecccCCccCCCc-------------ccccCccHHHHHHHhh
Confidence 9999999999994 6999999999999886
No 7
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=100.00 E-value=1.2e-36 Score=241.17 Aligned_cols=109 Identities=28% Similarity=0.217 Sum_probs=100.0
Q ss_pred hhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHHHHH
Q 027864 28 TDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLAR 107 (217)
Q Consensus 28 TdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~LlAk 107 (217)
...+.|.|..+.+ +++|||+||+||+||||||||| ++|+|||||||+|++.+++..+++|++||++||+|||+
T Consensus 7 ~~r~~r~R~ki~~-----~~rpRL~V~rSnkhIyAQiidd--~~g~tlasAST~e~~~~~~~~~~~n~~AA~~vG~llA~ 79 (116)
T 3r8s_O 7 IRRATRARRKLQE-----LGATRLVVHRTPRHIYAQVIAP--NGSEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAE 79 (116)
T ss_dssp HHHHHHHHHHHHT-----TTCCEEEEEECSSCEEEEEECT--TSSCEEEECCSSSHHHHTTCSCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc-----CCCCEEEEEEeCCEEEEEEEEc--CCCeEEEEEeeCchhhccccCCCCCHHHHHHHHHHHHH
Confidence 3456777777776 5799999999999999999986 58899999999999988887788999999999999999
Q ss_pred HHHhhhcccccccCcccccCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCcc
Q 027864 108 RVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLD 171 (217)
Q Consensus 108 Ral~k~~~~~~y~Gi~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL~ 171 (217)
||+++ ||++ |+||+|+++|| |||+|+++||+|+||+
T Consensus 80 Ral~~--------GI~~------------------vvfDrgg~~yh--GrV~Ala~~are~Gl~ 115 (116)
T 3r8s_O 80 RALEK--------GIKD------------------VSFDRSGFQYH--GRVQALADAAREAGLQ 115 (116)
T ss_dssp HHHTT--------TCCC------------------CEEECTTSCSS--SHHHHHHHHHHHTTCC
T ss_pred HHHHC--------CCCE------------------EEEecCCCccc--HHHHHHHHHHHHhCCC
Confidence 99999 9999 99999999995 6999999999999996
No 8
>1ovy_A 50S ribosomal protein L18; ribosome; NMR {Geobacillus stearothermophilus} SCOP: c.55.4.1
Probab=100.00 E-value=1.6e-36 Score=241.82 Aligned_cols=112 Identities=30% Similarity=0.289 Sum_probs=89.2
Q ss_pred cCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHH
Q 027864 25 EGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLL 104 (217)
Q Consensus 25 egkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~L 104 (217)
+.+...+.|.|..++|+ +++|||+||+||+||||||||| ++|+|||||||+|++. +. .+++|++||++||+|
T Consensus 9 ~~r~~r~~R~r~ki~gt----~~rpRL~V~rSnkhIyAQiidd--~~~~tl~sAsT~e~~~-~~-~~~~n~~AA~~vG~l 80 (120)
T 1ovy_A 9 AVRKKRHARIRKKIFGT----TERPRLSVFRSNKHIYAQIIDD--TKSATIVSASTLDKEF-GL-DSTNNIEAAKKVGEL 80 (120)
T ss_dssp ---------------CC----SSCCSEEEEEETTEEEEEEECC--SSCCCEEEESTTSTTT-CS-SCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC----CCCCEEEEEEeCCeEEEEEEEc--CCCEEEEEEecCchhh-Cc-CCCCcHHHHHHHHHH
Confidence 44556788999999997 7799999999999999999996 5899999999999983 33 367899999999999
Q ss_pred HHHHHHhhhcccccccCcccccCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCccc
Q 027864 105 LARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLDI 172 (217)
Q Consensus 105 lAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL~i 172 (217)
||+||+++ ||++ |+||+|+++| ||||+|+|+||+|+||+.
T Consensus 81 lA~Ral~~--------GI~~------------------vvfDrgg~~y--hgrV~ala~~are~GL~f 120 (120)
T 1ovy_A 81 VAKRALEK--------GIKQ------------------VVFDRGGYLY--HGRVKALADAAREAGLEF 120 (120)
T ss_dssp HHHHHHHH--------SSSC------------------CCCCSTTCSS--CSSTHHHHHHHHHHHCCC
T ss_pred HHHHHHHC--------CCCE------------------EEEecCCccc--cHHHHHHHHHHHHhCCcC
Confidence 99999999 9998 9999999999 579999999999999973
No 9
>3v2d_S 50S ribosomal protein L18; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_M 2hgj_R 2hgq_R 2hgu_R 1vsa_M 2j03_S 2jl6_S 2jl8_S 2v47_S 2v49_S 2wdi_S 2wdj_S 2wdl_S 2wdn_S 2wh2_S 2wh4_S 2wrj_S 2wrl_S 2wro_S 2wrr_S ...
Probab=100.00 E-value=6.3e-35 Score=230.30 Aligned_cols=107 Identities=29% Similarity=0.297 Sum_probs=96.7
Q ss_pred cCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHH
Q 027864 25 EGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLL 104 (217)
Q Consensus 25 egkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~L 104 (217)
+.+...+.|.|..++| +++|||+||+||+||||||||| ++|+|||||||+|++. + ++|++||++||++
T Consensus 5 ~~r~~r~~r~r~ki~g-----t~rpRL~V~rSnkhiyAQiidd--~~~~tlasAsT~e~~~---k--~~n~~AA~~vG~l 72 (112)
T 3v2d_S 5 TAYERRKFRVRNRIKR-----TGRLRLSVFRSLKHIYAQIIDD--EKGVTLVSASSLALKL---K--GNKTEVARQVGRA 72 (112)
T ss_dssp CHHHHHHHHHHHHHHH-----TCCCEEEEEECSSCEEEEEEET--TTTEEEEEEETTTTTC---C--CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC-----CCCCEEEEEEeCCeEEEEEEec--CCCeEEEEEEecchhc---c--CCCHHHHHHHHHH
Confidence 4445667888888888 4599999999999999999986 5899999999999974 2 6799999999999
Q ss_pred HHHHHHhhhcccccccCcccccCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCcc
Q 027864 105 LARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLD 171 (217)
Q Consensus 105 lAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL~ 171 (217)
||+||+++ ||++ |+||+|+++|| |||+|+++||+|+||+
T Consensus 73 lA~ra~~~--------GI~~------------------vvfDrgg~~yh--GrV~Ala~~are~GL~ 111 (112)
T 3v2d_S 73 LAEKALAL--------GIKQ------------------VAFDRGPYKYH--GRVKALAEGAREGGLE 111 (112)
T ss_dssp HHHHHHTT--------TCCB------------------CEEECTTSCSC--SSTTHHHHHHHHTTCB
T ss_pred HHHHHHHC--------CCCE------------------EEEecCCCccc--HHHHHHHHHHHHcCCC
Confidence 99999999 9999 99999999995 7999999999999997
No 10
>2zjr_L 50S ribosomal protein L18; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.55.4.1 PDB: 1sm1_M* 2zjp_L* 2zjq_L 1nkw_M 3cf5_L* 3dll_L* 3pio_L* 3pip_L* 1nwy_M* 1nwx_M* 1xbp_M* 1pnu_M 1pny_M 1vor_P 1vou_P 1vow_P 1voy_P 1vp0_P
Probab=100.00 E-value=6.4e-35 Score=230.90 Aligned_cols=107 Identities=27% Similarity=0.277 Sum_probs=93.8
Q ss_pred chhHHHHHHHHHhCCCCCC--CCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHH
Q 027864 27 KTDYRARIRLINQDKNKYN--TPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLL 104 (217)
Q Consensus 27 kTdY~~R~rli~~~k~k~~--~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~L 104 (217)
+...+.|.|..++|+ + +++|||+||+||+||||||||| ++|+|||||||+|+ .+++|++||++||++
T Consensus 6 r~~r~~r~r~ki~gt---~~~~~rpRL~V~rSnkhIyAQiidd--~~~~tl~sAST~el------~~~~n~~AA~~vG~l 74 (114)
T 2zjr_L 6 TIRRKLRTRRKVRTT---TAASGRLRLSVYRSSKHIYAQIIDD--SRGQTLAAASSAAL------KSGNKTDTAAAVGKA 74 (114)
T ss_dssp --CHHHHHHHHHHSC---STTTCSEEECCCTTSSCCCCCEEET--TTTEECCCCCSCSC------CTTCSSSSHHHHHHH
T ss_pred HHHHHHHHHhhhccc---cCCCCCCEEEEEEeCCeEEEEEEEc--CCCEEEEEEEchHh------cCCCCHHHHHHHHHH
Confidence 445688999999984 2 5699999999999999999986 58999999999996 157899999999999
Q ss_pred HHHHHHhhhcccccccCcccccCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCccc
Q 027864 105 LARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLDI 172 (217)
Q Consensus 105 lAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL~i 172 (217)
||+|++++ ||++ |+||+|+++| ||||+|+++||+|+||++
T Consensus 75 lA~Ral~~--------GI~~------------------vvfDrgg~~y--hgrV~Ala~~are~GL~f 114 (114)
T 2zjr_L 75 LAAAAAEK--------GIKQ------------------VVFDRGSYKY--HGRVKALADAAREGGLDF 114 (114)
T ss_dssp HHHHHHTT--------CCCC------------------CEECCCSSCS--CSHHHHHHHHHHHHC---
T ss_pred HHHHHHHC--------CCCE------------------EEEecCCccc--cHHHHHHHHHHHHhCCcC
Confidence 99999999 9999 9999999999 579999999999999974
No 11
>3bbo_Q Ribosomal protein L18; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=99.97 E-value=1.8e-33 Score=233.94 Aligned_cols=115 Identities=25% Similarity=0.242 Sum_probs=100.5
Q ss_pred ccccCchhHHHHHHHHHhCCCCCCCCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccc---cccccCCCcHHHH
Q 027864 22 RRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPR---YGLEVGLTNYAAA 98 (217)
Q Consensus 22 RRregkTdY~~R~rli~~~k~k~~~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k---~g~k~~~~N~~AA 98 (217)
-|++.+...+.|+|..++|+ +.+|||+||+||+||||||||| ++|+|||||||+|++. .+| +.++|++||
T Consensus 43 ~k~~~R~rR~~RiR~ki~gt----~~rPRL~V~rSnkhIyAQvIdd--~~g~tLasASTlek~lk~~l~~-g~~~n~~AA 115 (161)
T 3bbo_Q 43 TRREDRTARHVRIRKKVEGT----PERPRLCVFRSNKHLYVQVIDD--SKMHTLASASTMQKSISEELDY-SSSPTIEVA 115 (161)
T ss_dssp CCCCCGGGTSCCSCSGGGGS----SSCCCCEEEECSSCEEEEEECC--TTSCEEEEEEHHHHHHHHCCTT-CCSSSHHHH
T ss_pred chHHHHHHHHHHHHHhhccC----CCCCEEEEEecCCeEEEEEEEC--CCCEEEEEEeCCcHHHHhhccc-cCCCCHHHH
Confidence 34455666777888899987 6799999999999999999996 4889999999988652 233 357899999
Q ss_pred HHHHHHHHHHHHhhhcccccccCcccccCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCcc
Q 027864 99 YCTGLLLARRVLKMLEMDAEYEGHVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLD 171 (217)
Q Consensus 99 y~vG~LlAkRal~k~~~~~~y~Gi~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL~ 171 (217)
++||++||+||+++ ||++ |+||+|+++|| |||+|+++||+|+||+
T Consensus 116 ~~VG~liAeRA~e~--------GI~~------------------VvFDRgg~~Yh--GRVkAladaaRe~GL~ 160 (161)
T 3bbo_Q 116 KKVGEVIASACLEK--------GITK------------------VAFDRGGYPYH--GRVKALADAAREKGLQ 160 (161)
T ss_dssp HHHHHHSSSHHHHT--------SSCC------------------CCCCCSSSCSS--STTHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHHHC--------CCCE------------------EEEeCCCCcch--HHHHHHHHHHHHhCCc
Confidence 99999999999999 9999 99999999996 6999999999999997
No 12
>4gmn_B 60S ribosomal protein L5-like protein; ARM, heat, solenoid, linear motif, nuclear transport, chaper ribosome assembly, RPL11, KAP104; 2.95A {Chaetomium thermophilum}
Probab=99.87 E-value=9.7e-24 Score=142.87 Aligned_cols=44 Identities=59% Similarity=0.893 Sum_probs=42.3
Q ss_pred CceeeeeccccccccccccccccccCchhHHHHHHHHHhCCCCC
Q 027864 1 MAFAKAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKY 44 (217)
Q Consensus 1 m~~~k~~kn~~y~~r~~vk~RRRregkTdY~~R~rli~~~k~k~ 44 (217)
|+|+|++||+||||||||||||||||||||++|.+|++|||+..
T Consensus 1 M~FvKvvKnkaYfkRyQvkfRRRREGKTDYyaRkrLv~QdKas~ 44 (49)
T 4gmn_B 1 MAFHKLVKNSAYYSRFQTKFKRRRQGKTDYYARKRLITQAKGSH 44 (49)
T ss_pred CCceeeehhHHHHHHHhhHHhhhhcccchHHHHHHHHhhccccc
Confidence 99999999999999999999999999999999999999998653
No 13
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=96.89 E-value=0.0097 Score=48.03 Aligned_cols=105 Identities=16% Similarity=0.073 Sum_probs=75.0
Q ss_pred cceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccC
Q 027864 48 KYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATG 127 (217)
Q Consensus 48 kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~ 127 (217)
..-+-|+-|-++.++.|.|. .|..||+.+|+-..-+.+-. ....-||.+++..+|+++++. |++.+.
T Consensus 14 ~gi~hI~asfNNTivtiTD~--~G~~~i~~~S~G~~gfkg~~--ksTp~AA~~aa~~~~~~a~e~--------Gi~~v~- 80 (137)
T 3j20_M 14 WGIAHIYSSFNNTIIHITDI--TGAETISRWSGGMVVKADRD--EPSPYAAMLAARRAAEEALEK--------GIVGVH- 80 (137)
T ss_dssp EEEEEEEECSSCEEEEEEES--SSCSEEEEEEGGGTCSCTTT--SSSHHHHHHHHHHHHHHHHHH--------TEEEEE-
T ss_pred ceEEEEEcCCCCEEEEEEcC--CCCEEEEEEccceeeecCCc--cCCHHHHHHHHHHHHHHHHHc--------CCeEEE-
Confidence 56677999999999999996 47679998887655443322 346678999999999999999 998722
Q ss_pred cccccccCCCCCCcEEEEeec--cccc--ccCcchhhhhcccccCCcc---------ccCCccccCCC
Q 027864 128 EDYSVEPTENRRPFRALLDVG--LVKT--TTGNRVFGALKGALDGGLD---------IPHSEKRFAGF 182 (217)
Q Consensus 128 ~~~~~~~~~~~~~~~~vlD~G--l~r~--~~g~rV~a~~kGa~d~GL~---------iPh~~~~fp~~ 182 (217)
+.| .| +.++ .+-|| -++++++..+||+ |||+-.|-|+-
T Consensus 81 ---------------V~v-kG~gg~~~~~pG~Gr-esairaL~~~Gl~I~~I~DvTpiPhnGcRp~g~ 131 (137)
T 3j20_M 81 ---------------IRV-RAPGGSKSKTPGPGA-QAAIRALARAGLKIGRVEDVTPIPHDGTRPKGG 131 (137)
T ss_dssp ---------------EEE-ECCCSSSCCSCCTHH-HHHHHHHHHHTCEEEEEEECCCCCSSCCCCSCC
T ss_pred ---------------EEE-ECCCCCCCcCCCCcH-HHHHHHHHhCCCEEEEEEEcCCCCCCCCCCCCC
Confidence 333 33 3332 22233 3456666667887 69999999974
No 14
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=96.63 E-value=0.016 Score=46.21 Aligned_cols=101 Identities=17% Similarity=0.172 Sum_probs=75.0
Q ss_pred CCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccc
Q 027864 46 TPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEA 125 (217)
Q Consensus 46 ~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~ 125 (217)
-+.+.+-|+-|-+|.++.|.|. .| .+++.+|+-.....+-. ....-||+.++..+|+++++. |++.+
T Consensus 14 ~~~gi~hI~as~NNTivtiTd~--~G-~~~~~~SaG~~gfKg~r--k~tp~AA~~aa~~~~~~~~~~--------Gi~~v 80 (129)
T 2vqe_K 14 VASGRAYIHASYNNTIVTITDP--DG-NPITWSSGGVIGYKGSR--KGTPYAAQLAALDAAKKAMAY--------GMQSV 80 (129)
T ss_dssp CSEEEEEEEECSSCEEEEEECT--TS-CEEEECCTTTTTCCSGG--GGSHHHHHHHHHHHHHHHHTT--------TCCEE
T ss_pred ccceEEEEEecCCCEEEEEEcC--CC-CEEEEEeccceeEcCCC--cCCHHHHHHHHHHHHHHHHHh--------CCeEE
Confidence 3468899999999999999995 35 78888887666543332 357889999999999999999 98762
Q ss_pred cCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCcc---------ccCCccccCC
Q 027864 126 TGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLD---------IPHSEKRFAG 181 (217)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL~---------iPh~~~~fp~ 181 (217)
. +.| .|. +-|| .+++++...+||+ |||+-.|-|.
T Consensus 81 ~----------------V~v-kG~----G~Gr-e~airaL~~~Gl~I~~I~DvTpiPhnGcRp~K 123 (129)
T 2vqe_K 81 D----------------VIV-RGT----GAGR-EQAIRALQASGLQVKSIVDDTPVPHNGCRPKK 123 (129)
T ss_dssp E----------------EEE-ESC----CTTH-HHHHHHHHTSSSEEEECEECCCCCSSCSCCCG
T ss_pred E----------------EEE-ECC----CCCH-HHHHHHHHHCCCEEEEEEEcCCCCCCCCCCCC
Confidence 2 333 332 2244 4677888888986 7998888875
No 15
>3bbn_K Ribosomal protein S11; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=96.03 E-value=0.02 Score=46.35 Aligned_cols=101 Identities=22% Similarity=0.159 Sum_probs=74.0
Q ss_pred CCcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccc
Q 027864 46 TPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEA 125 (217)
Q Consensus 46 ~~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~ 125 (217)
-+..-+-|+-|.+|.++.|.|. .| .+++.+|+-.+...|-. ....-||+.++..+|+++++. |++.+
T Consensus 27 ~~~gi~hI~as~NNTivtiTD~--~G-~~i~~~SaG~~GfKg~r--ksTp~AA~~aa~~~~~~a~e~--------Gi~~v 93 (140)
T 3bbn_K 27 IPKGVIHVQASFNNTIVTVTDV--RG-RVVSWASAGTCGFRGTK--RGTPFAAQTAAGNAIRTVVEQ--------GMQRA 93 (140)
T ss_dssp CCCCEEEEEECSSCEEEEEECS--SS-CEEEEEETTTSSCCTTS--CSSHHHHHHHHTSGGGTSTTT--------CCCEE
T ss_pred ceeeEEEEEecCCCEEEEEEcC--CC-CEEEEEeccceeEcccc--cCCHHHHHHHHHHHHHHHHHh--------CCeEE
Confidence 4468899999999999999995 35 78888888666544332 457889999999999999998 98762
Q ss_pred cCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCcc---------ccCCccccCC
Q 027864 126 TGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLD---------IPHSEKRFAG 181 (217)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL~---------iPh~~~~fp~ 181 (217)
. +.| .|. +-|| .+++++...+||+ |||+-.|-|.
T Consensus 94 ~----------------V~v-kG~----G~GR-eaairaL~~~Gl~I~~I~DvTpiPhnGcRppK 136 (140)
T 3bbn_K 94 E----------------VMI-KGP----GLGR-DAALRAIRRSGILLSFVRDVTPMPHNGCRPPK 136 (140)
T ss_dssp E----------------EEE-ESC----STTS-SHHHHHHHTTTCEEEEEEECCCCCCSCCCCCC
T ss_pred E----------------EEE-ECC----CCcH-HHHHHHHHHCCCEEEEEEEcCCCCCCCCCCCC
Confidence 2 322 332 2234 3667777778986 6898888775
No 16
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=95.90 E-value=0.04 Score=43.15 Aligned_cols=100 Identities=18% Similarity=0.095 Sum_probs=70.8
Q ss_pred CcceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCccccc
Q 027864 47 PKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEAT 126 (217)
Q Consensus 47 ~kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~ 126 (217)
+.--+-|+-|-+|.++.+.|. .| .+|+.+|+-.+...+-. .+...||.++++-+++++++. |++.+.
T Consensus 5 ~~gi~hI~as~NNTivtiTD~--~G-~~i~~~S~G~~gfKg~r--k~tp~AA~~aa~~~~~~~~~~--------Gi~~v~ 71 (117)
T 3r8n_K 5 SDGVAHIHASFNNTIVTITDR--QG-NALGWATAGGSGFRGSR--KSTPFAAQVAAERCADAVKEY--------GIKNLE 71 (117)
T ss_dssp CEEEEEEEECSSCEEEEEECT--TS-CCSEEEETGGGSCCGGG--GSSHHHHHHHHHHHHHHHTTS--------CCCEEE
T ss_pred ceeEEEEEcccCCEEEEEEcC--CC-CEEEEEcCCccccCCCc--cCCHHHHHHHHHHHHHHHHHh--------CCcEEE
Confidence 344567899999999999995 46 68888887666543332 346778999999999999999 988722
Q ss_pred CcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCcc---------ccCCccccCC
Q 027864 127 GEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGLD---------IPHSEKRFAG 181 (217)
Q Consensus 127 ~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL~---------iPh~~~~fp~ 181 (217)
+.| .|. +-|| .+++++....||+ |||+-.|-|.
T Consensus 72 ----------------v~v-kG~----G~Gr-~~airaL~~~Gl~I~~I~DvTpiphnGcRp~K 113 (117)
T 3r8n_K 72 ----------------VMV-KGP----GPGR-ESTIRALNAAGFRITNITDVTPIPHNGCRPPK 113 (117)
T ss_dssp ----------------EEE-ECS----SSST-THHHHHHHHTTCEEEEEEECCCCCSSCSCCCC
T ss_pred ----------------EEE-eCC----CccH-HHHHHHHHhCCCEEEEEEEeCCCCCCCCCCCC
Confidence 333 332 2233 3566666677887 6998888774
No 17
>2xzm_K RPS14E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_K 3j0o_K 3j0l_K 2zkq_k 3iz6_K 3jyv_K*
Probab=95.85 E-value=0.031 Score=45.79 Aligned_cols=106 Identities=17% Similarity=0.087 Sum_probs=73.2
Q ss_pred cceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccC
Q 027864 48 KYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATG 127 (217)
Q Consensus 48 kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~ 127 (217)
..-+-|+-|-+|.++.|.|. .|..|++++|.-..-+.+- .....-||.+++..+|+++++. ||+.+.
T Consensus 28 ~gi~hI~asfNNTiVtiTD~--~G~~~~~~ssgg~~~k~~r--~ksTpyAAq~aa~~~a~~a~e~--------Gi~~v~- 94 (151)
T 2xzm_K 28 FGVCHIMATWNDTFIHVTDL--SGRETLVRVTGGMKVKADR--EESSPYAAMQAAIDVVNRCKEL--------KINALH- 94 (151)
T ss_dssp EEEEEEEBCSSCBCCEEECT--TCCSEEEECCHHHHCSSGG--GGSCHHHHHHHHHHHHHHHHHH--------TCCEEE-
T ss_pred eeEEEEEccCCCEEEEEECC--CCCEEEEEecCcceEeCCC--CcCCHHHHHHHHHHHHHHHHHc--------CCeEEE-
Confidence 57788999999999999995 5876777655432222221 1346778899999999999999 998722
Q ss_pred cccccccCCCCCCcEEEE-eecccccccC-cchhhhhcccccCCcc---------ccCCccccCC
Q 027864 128 EDYSVEPTENRRPFRALL-DVGLVKTTTG-NRVFGALKGALDGGLD---------IPHSEKRFAG 181 (217)
Q Consensus 128 ~~~~~~~~~~~~~~~~vl-D~Gl~r~~~g-~rV~a~~kGa~d~GL~---------iPh~~~~fp~ 181 (217)
+.| ..|+.++.+- --=.+++++...+||+ |||+-.|-|.
T Consensus 95 ---------------V~vkG~gg~~~kgpG~GresairaL~~~GlkI~~I~DvTpiPhNGcRp~K 144 (151)
T 2xzm_K 95 ---------------IKLRAKGGVETKQPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRREG 144 (151)
T ss_dssp ---------------EEEECCCTTSCCSCCSHHHHHHHHHHHTSCEEEEEEECCCCCSSCCCCSS
T ss_pred ---------------EEEEcCCCCCccCCCccHHHHHHHHHHCCCEEEEEEEeCCCCCCCCCCCC
Confidence 333 2344543321 1125677777788987 7999888886
No 18
>3u5c_O RP59A, 40S ribosomal protein S14-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_K 3o30_H 3o2z_H 3u5g_O 1s1h_K 3jyv_K*
Probab=95.24 E-value=0.039 Score=44.46 Aligned_cols=106 Identities=16% Similarity=0.114 Sum_probs=69.4
Q ss_pred cceEEEEecCCcEEEEEEEeecCCCEEEEEEecCCccccccccCCCcHHHHHHHHHHHHHHHHhhhcccccccCcccccC
Q 027864 48 KYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGHVEATG 127 (217)
Q Consensus 48 kpRLvV~rSnkhIyaQIId~~~~Gd~tLasAsS~el~k~g~k~~~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi~e~~~ 127 (217)
..-+-|+-|-++.++.|.|. .|..+++ .||-....++-. ..+..-||.++++.+|+++++. |++.+.
T Consensus 14 ~gi~hI~asfNNTivtvTD~--~G~~~~~-~ssG~~gfKg~r-~ksTpyAAq~aa~~~a~~a~e~--------Gi~~v~- 80 (137)
T 3u5c_O 14 FGVARIYASFNDTFVHVTDL--SGKETIA-RVTGGMKVKADR-DESSPYAAMLAAQDVAAKCKEV--------GITAVH- 80 (137)
T ss_dssp EEECCEEEETTEEEECCEET--TSSSCCC-CCBTTTTSCCST-TTTCHHHHHHHHHHHHHHHHHH--------TCCEEE-
T ss_pred eEEEEEEccCCCEEEEEEcC--CCCEEEE-EeCCCcEEeCCc-ccCCHHHHHHHHHHHHHHHHHc--------CCeEEE-
Confidence 45566899999999999995 4754444 444443322210 1246678999999999999999 998722
Q ss_pred cccccccCCCCCCcEEEE-eecccccccCcc-hhhhhcccccCCcc---------ccCCccccCC
Q 027864 128 EDYSVEPTENRRPFRALL-DVGLVKTTTGNR-VFGALKGALDGGLD---------IPHSEKRFAG 181 (217)
Q Consensus 128 ~~~~~~~~~~~~~~~~vl-D~Gl~r~~~g~r-V~a~~kGa~d~GL~---------iPh~~~~fp~ 181 (217)
+.+ -.|+.++.+-|. =-++++++..+||+ |||+-.|-|+
T Consensus 81 ---------------V~vra~gg~~~kgpG~Gr~sairaL~~~Gl~I~~I~DvTpiPhnGcRp~K 130 (137)
T 3u5c_O 81 ---------------VKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKG 130 (137)
T ss_dssp ---------------CEEECSCTTSCCSCCGGGHHHHHHHHTTTCEECCCEECCCCCSSCSCCTT
T ss_pred ---------------EEEeccCCCcccCCCcchHHHHHHHHhCCCEEEEEEEcCCCCCCCCCCCC
Confidence 444 235554432221 23466777777887 6999888886
No 19
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=24.05 E-value=60 Score=27.35 Aligned_cols=56 Identities=16% Similarity=0.023 Sum_probs=36.8
Q ss_pred CCcHHHHHHHHHHHHHHHHhhhcccccccCc-ccccCcccccccCCCCCCcEEEEeecccccccCcchhhhhcccccCCc
Q 027864 92 LTNYAAAYCTGLLLARRVLKMLEMDAEYEGH-VEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGALDGGL 170 (217)
Q Consensus 92 ~~N~~AAy~vG~LlAkRal~k~~~~~~y~Gi-~e~~~~~~~~~~~~~~~~~~~vlD~Gl~r~~~g~rV~a~~kGa~d~GL 170 (217)
..|.+++|+.|.+ |..+.+. |. +. +.|=-|........|..|+.+|+.+.|+
T Consensus 107 ~d~~~~~~lag~~-a~~l~~~--------Gh~r~------------------Ig~i~g~~~~~~~~r~~Gf~~~~~~~~~ 159 (318)
T 2fqx_A 107 FGQNEGSFLVGVA-AALKAKE--------AGKSA------------------VGFIVGMELGMMPLFEAGFEAGVKAVDP 159 (318)
T ss_dssp ECHHHHHHHHHHH-HHHHHHH--------TTCCE------------------EEEEESCCSTTTHHHHHHHHHHHHHHCT
T ss_pred echHHHHHHHHHH-HHHHhcc--------CCCcE------------------EEEEeCcccHHHHHHHHHHHHHHHHHCC
Confidence 4699999999954 6667777 64 33 3332232222333588999999999998
Q ss_pred cccC
Q 027864 171 DIPH 174 (217)
Q Consensus 171 ~iPh 174 (217)
++..
T Consensus 160 ~~~~ 163 (318)
T 2fqx_A 160 DIQV 163 (318)
T ss_dssp TCEE
T ss_pred CCEE
Confidence 7643
No 20
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=20.87 E-value=24 Score=24.75 Aligned_cols=16 Identities=38% Similarity=0.619 Sum_probs=14.0
Q ss_pred hhhcccccCCccccCC
Q 027864 160 GALKGALDGGLDIPHS 175 (217)
Q Consensus 160 a~~kGa~d~GL~iPh~ 175 (217)
-+++.|.++|+.||++
T Consensus 22 tlL~a~~~~gi~i~~~ 37 (95)
T 1frr_A 22 TILDAAEEAGYDLPFS 37 (95)
T ss_dssp CHHHHHHHTTCCCCCS
T ss_pred cHHHHHHHcCCCCCCC
Confidence 4788899999999986
No 21
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=20.64 E-value=24 Score=24.99 Aligned_cols=16 Identities=38% Similarity=0.760 Sum_probs=14.1
Q ss_pred hhhcccccCCccccCC
Q 027864 160 GALKGALDGGLDIPHS 175 (217)
Q Consensus 160 a~~kGa~d~GL~iPh~ 175 (217)
-+++.|.++|+.||++
T Consensus 25 tlL~a~~~~gi~i~~~ 40 (98)
T 1frd_A 25 TILDGAEENGIELPFS 40 (98)
T ss_dssp CHHHHHHHTTCCCCCS
T ss_pred cHHHHHHHcCCCcccC
Confidence 4788999999999997
Done!