Query 027870
Match_columns 217
No_of_seqs 248 out of 973
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 03:32:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027870.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027870hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vr3_A Acireductone dioxygenas 100.0 4.1E-54 1.4E-58 365.0 20.6 180 29-208 10-189 (191)
2 1zrr_A E-2/E-2' protein; nicke 100.0 6.2E-34 2.1E-38 238.7 8.0 156 39-199 7-174 (179)
3 1v70_A Probable antibiotics sy 99.2 1.4E-10 4.8E-15 83.7 8.9 64 115-183 40-104 (105)
4 3h8u_A Uncharacterized conserv 99.2 1.2E-10 4E-15 88.5 8.8 69 115-188 51-122 (125)
5 2b8m_A Hypothetical protein MJ 99.1 2.1E-10 7.3E-15 86.3 8.3 67 115-186 39-106 (117)
6 3fjs_A Uncharacterized protein 99.1 1.7E-10 5.8E-15 87.9 7.7 63 115-182 48-110 (114)
7 4i4a_A Similar to unknown prot 99.1 7.3E-10 2.5E-14 84.2 9.1 62 115-181 46-107 (128)
8 2ozj_A Cupin 2, conserved barr 99.0 4E-10 1.4E-14 84.4 7.1 52 115-171 50-101 (114)
9 2gu9_A Tetracenomycin polyketi 99.0 7.9E-10 2.7E-14 81.2 8.5 62 116-182 34-98 (113)
10 1x82_A Glucose-6-phosphate iso 99.0 1.6E-09 5.5E-14 89.9 11.1 68 116-183 86-156 (190)
11 4e2g_A Cupin 2 conserved barre 99.0 7.4E-10 2.5E-14 84.0 8.3 61 115-181 53-113 (126)
12 1yhf_A Hypothetical protein SP 99.0 9.3E-10 3.2E-14 82.0 8.5 52 115-171 52-103 (115)
13 1vj2_A Novel manganese-contain 99.0 7.6E-10 2.6E-14 85.0 8.2 63 116-183 61-123 (126)
14 3ibm_A Cupin 2, conserved barr 99.0 2.2E-09 7.5E-14 87.4 11.1 64 115-183 68-132 (167)
15 3ht1_A REMF protein; cupin fol 99.0 1E-09 3.5E-14 84.6 8.1 64 115-183 51-116 (145)
16 2pfw_A Cupin 2, conserved barr 99.0 1.5E-09 5.1E-14 81.0 8.6 59 116-181 47-105 (116)
17 3d82_A Cupin 2, conserved barr 99.0 6.4E-10 2.2E-14 80.7 6.3 51 115-170 41-92 (102)
18 1lr5_A Auxin binding protein 1 99.0 1.7E-09 5.8E-14 86.4 8.7 70 115-184 53-127 (163)
19 3l2h_A Putative sugar phosphat 99.0 2.4E-09 8.2E-14 85.3 9.3 68 116-188 60-129 (162)
20 2o8q_A Hypothetical protein; c 99.0 1.6E-09 5.6E-14 83.2 8.0 61 116-182 56-118 (134)
21 3kgz_A Cupin 2 conserved barre 98.9 1.2E-09 3.9E-14 88.6 6.9 66 115-185 56-121 (156)
22 2oa2_A BH2720 protein; 1017534 98.9 3.8E-09 1.3E-13 83.3 9.8 69 115-183 55-125 (148)
23 2f4p_A Hypothetical protein TM 98.9 3E-09 1E-13 84.4 9.2 64 115-183 60-124 (147)
24 2q30_A Uncharacterized protein 98.9 3E-09 1E-13 78.1 8.5 62 115-183 45-109 (110)
25 3jzv_A Uncharacterized protein 98.9 3.3E-09 1.1E-13 86.8 8.9 64 115-183 65-128 (166)
26 2i45_A Hypothetical protein; n 98.9 1.4E-09 4.9E-14 80.6 5.8 50 116-170 40-91 (107)
27 1fi2_A Oxalate oxidase, germin 98.9 7.3E-09 2.5E-13 86.3 10.6 73 115-187 84-161 (201)
28 3i7d_A Sugar phosphate isomera 98.9 6.8E-09 2.3E-13 83.9 8.6 64 117-185 58-124 (163)
29 2fqp_A Hypothetical protein BP 98.9 6.9E-09 2.4E-13 76.2 7.8 59 116-179 31-92 (97)
30 2opk_A Hypothetical protein; p 98.9 7.2E-09 2.5E-13 78.8 7.9 59 118-181 48-109 (112)
31 3cew_A Uncharacterized cupin p 98.8 8.6E-09 2.9E-13 78.4 8.3 60 118-182 42-102 (125)
32 3rns_A Cupin 2 conserved barre 98.8 7.3E-09 2.5E-13 87.7 8.5 62 113-181 47-108 (227)
33 3lwc_A Uncharacterized protein 98.8 7.5E-09 2.6E-13 80.1 7.5 64 116-188 53-116 (119)
34 1o4t_A Putative oxalate decarb 98.8 1E-08 3.5E-13 79.6 8.1 59 116-179 70-129 (133)
35 4b29_A Dimethylsulfoniopropion 98.8 1.3E-08 4.5E-13 87.6 9.5 67 113-184 142-208 (217)
36 2bnm_A Epoxidase; oxidoreducta 98.8 1.4E-08 4.8E-13 82.8 9.1 62 118-180 135-197 (198)
37 3h7j_A Bacilysin biosynthesis 98.8 8.7E-09 3E-13 87.9 7.4 63 115-182 158-220 (243)
38 1y9q_A Transcriptional regulat 98.8 1.5E-08 5.3E-13 82.5 8.4 58 118-181 121-178 (192)
39 1o5u_A Novel thermotoga mariti 98.8 2.2E-08 7.5E-13 75.7 8.0 49 117-171 44-93 (101)
40 2vqa_A SLL1358 protein, MNCA; 98.8 4.1E-08 1.4E-12 87.3 10.7 69 115-183 64-133 (361)
41 1sef_A Conserved hypothetical 98.7 3.4E-08 1.2E-12 85.7 9.5 59 116-179 195-255 (274)
42 1yfu_A 3-hydroxyanthranilate-3 98.7 4.1E-08 1.4E-12 81.9 9.4 57 113-170 45-101 (174)
43 1dgw_A Canavalin; duplicated s 98.7 4.5E-08 1.5E-12 80.3 9.5 75 95-181 43-119 (178)
44 4h7l_A Uncharacterized protein 98.7 2.2E-08 7.5E-13 82.2 7.4 59 115-182 57-118 (157)
45 3rns_A Cupin 2 conserved barre 98.7 2.2E-08 7.5E-13 84.7 7.5 60 114-179 164-223 (227)
46 2vqa_A SLL1358 protein, MNCA; 98.7 7.7E-08 2.6E-12 85.6 10.5 68 115-182 246-314 (361)
47 1j58_A YVRK protein; cupin, de 98.7 4.4E-08 1.5E-12 88.1 8.8 67 115-182 91-157 (385)
48 2arc_A ARAC, arabinose operon 98.7 6.7E-08 2.3E-12 75.1 8.4 49 117-170 32-80 (164)
49 1fxz_A Glycinin G1; proglycini 98.7 1.9E-07 6.6E-12 88.2 12.7 75 113-188 348-425 (476)
50 1y3t_A Hypothetical protein YX 98.7 6.7E-08 2.3E-12 84.4 8.9 62 115-182 230-292 (337)
51 1y3t_A Hypothetical protein YX 98.6 8.4E-08 2.9E-12 83.8 9.0 62 115-182 58-120 (337)
52 4axo_A EUTQ, ethanolamine util 98.6 7.4E-08 2.5E-12 78.4 8.0 61 120-188 81-141 (151)
53 3h7j_A Bacilysin biosynthesis 98.6 5.4E-08 1.9E-12 82.9 7.5 60 115-179 46-106 (243)
54 1rc6_A Hypothetical protein YL 98.6 9.7E-08 3.3E-12 82.1 9.1 60 115-179 191-252 (261)
55 1j58_A YVRK protein; cupin, de 98.6 1.6E-07 5.5E-12 84.4 10.7 68 115-182 269-337 (385)
56 2d40_A Z3393, putative gentisa 98.6 4.2E-08 1.4E-12 88.8 6.8 62 114-180 111-173 (354)
57 2cav_A Protein (canavalin); vi 98.6 1.2E-07 4E-12 88.9 10.0 79 94-183 87-166 (445)
58 3c3v_A Arachin ARAH3 isoform; 98.6 2.5E-07 8.6E-12 88.2 12.1 76 113-189 382-460 (510)
59 3nw4_A Gentisate 1,2-dioxygena 98.6 6.5E-08 2.2E-12 88.9 7.6 60 114-178 114-174 (368)
60 3es1_A Cupin 2, conserved barr 98.6 1.6E-07 5.3E-12 77.9 8.9 74 95-184 81-155 (172)
61 2d5f_A Glycinin A3B4 subunit; 98.6 2.5E-07 8.5E-12 87.7 11.1 76 113-189 377-455 (493)
62 2vpv_A Protein MIF2, MIF2P; nu 98.6 3.9E-07 1.3E-11 75.2 10.6 56 117-177 104-159 (166)
63 2ea7_A 7S globulin-1; beta bar 98.6 2.4E-07 8.3E-12 86.4 10.1 77 94-181 62-139 (434)
64 4e2q_A Ureidoglycine aminohydr 98.5 2.7E-07 9.3E-12 81.3 9.7 68 95-177 188-256 (266)
65 1uij_A Beta subunit of beta co 98.5 2.5E-07 8.5E-12 85.8 9.8 77 94-181 50-127 (416)
66 1fxz_A Glycinin G1; proglycini 98.5 2.1E-07 7.2E-12 87.9 9.4 81 91-182 47-149 (476)
67 1juh_A Quercetin 2,3-dioxygena 98.5 2.2E-07 7.4E-12 83.8 8.7 63 118-181 65-128 (350)
68 2xlg_A SLL1785 protein, CUCA; 98.5 9.8E-08 3.3E-12 82.6 6.1 65 116-180 56-137 (239)
69 3bu7_A Gentisate 1,2-dioxygena 98.5 2.1E-07 7.2E-12 86.1 8.6 61 114-179 305-366 (394)
70 1sfn_A Conserved hypothetical 98.5 4.3E-07 1.5E-11 77.8 9.8 55 118-177 181-235 (246)
71 1sq4_A GLXB, glyoxylate-induce 98.5 2.4E-07 8.1E-12 81.2 8.2 58 117-179 84-141 (278)
72 1zvf_A 3-hydroxyanthranilate 3 98.5 4.4E-07 1.5E-11 75.8 9.3 59 114-172 45-106 (176)
73 3d0j_A Uncharacterized protein 98.5 2.4E-07 8.3E-12 74.8 7.5 90 113-207 39-134 (140)
74 2e9q_A 11S globulin subunit be 98.5 2.6E-07 8.8E-12 87.0 8.8 82 91-183 62-164 (459)
75 3bu7_A Gentisate 1,2-dioxygena 98.5 3.8E-07 1.3E-11 84.4 9.7 60 114-178 134-195 (394)
76 2d5f_A Glycinin A3B4 subunit; 98.5 4.1E-07 1.4E-11 86.3 10.1 81 90-182 43-149 (493)
77 3bcw_A Uncharacterized protein 98.5 1.7E-07 5.9E-12 73.2 6.2 50 117-171 62-112 (123)
78 2pyt_A Ethanolamine utilizatio 98.5 2E-07 6.9E-12 73.5 6.3 52 122-180 74-125 (133)
79 1juh_A Quercetin 2,3-dioxygena 98.5 4.8E-07 1.6E-11 81.5 9.4 62 114-181 263-325 (350)
80 3qac_A 11S globulin SEED stora 98.5 4.6E-07 1.6E-11 85.5 9.5 82 91-183 49-167 (465)
81 3c3v_A Arachin ARAH3 isoform; 98.5 5.1E-07 1.7E-11 86.0 9.5 83 90-183 46-163 (510)
82 2phl_A Phaseolin; plant SEED s 98.4 7.3E-07 2.5E-11 82.5 9.6 77 95-182 54-137 (397)
83 3fz3_A Prunin; TREE NUT allerg 98.4 1.4E-06 4.9E-11 83.3 11.4 76 113-189 404-482 (531)
84 3ksc_A LEGA class, prolegumin; 98.3 1.7E-06 5.8E-11 82.2 9.8 83 90-183 44-147 (496)
85 1sq4_A GLXB, glyoxylate-induce 98.3 1.2E-06 4.2E-11 76.6 8.1 56 118-178 207-262 (278)
86 2d40_A Z3393, putative gentisa 98.3 8.7E-07 3E-11 80.2 6.6 50 115-169 280-329 (354)
87 2e9q_A 11S globulin subunit be 98.3 3E-06 1E-10 79.7 10.4 70 113-183 332-403 (459)
88 2phl_A Phaseolin; plant SEED s 98.3 3.8E-06 1.3E-10 77.7 10.8 69 113-183 249-325 (397)
89 1uij_A Beta subunit of beta co 98.3 3.7E-06 1.3E-10 77.9 10.7 68 114-183 260-342 (416)
90 3lag_A Uncharacterized protein 98.3 7.9E-07 2.7E-11 66.3 4.7 63 115-179 29-92 (98)
91 2o1q_A Putative acetyl/propion 98.2 5.9E-07 2E-11 71.5 3.9 79 95-187 46-124 (145)
92 1rc6_A Hypothetical protein YL 98.2 2.7E-06 9.4E-11 72.9 8.1 53 122-179 80-132 (261)
93 3ksc_A LEGA class, prolegumin; 98.2 9.9E-06 3.4E-10 77.0 12.5 75 113-188 368-445 (496)
94 1sef_A Conserved hypothetical 98.2 4.3E-06 1.5E-10 72.4 8.0 54 121-179 82-135 (274)
95 2qnk_A 3-hydroxyanthranilate 3 98.2 6.4E-06 2.2E-10 73.3 9.0 59 115-175 43-102 (286)
96 3kgl_A Cruciferin; 11S SEED gl 98.1 7.3E-06 2.5E-10 77.3 9.8 74 113-187 333-409 (466)
97 2ea7_A 7S globulin-1; beta bar 98.1 7.6E-06 2.6E-10 76.3 9.5 68 114-183 277-358 (434)
98 3qac_A 11S globulin SEED stora 98.1 1.2E-05 4E-10 75.9 10.5 91 96-187 306-409 (465)
99 3s7i_A Allergen ARA H 1, clone 98.1 1E-05 3.6E-10 75.2 9.6 68 114-183 274-367 (418)
100 2ozi_A Hypothetical protein RP 98.1 6.2E-06 2.1E-10 61.7 6.5 62 116-179 30-92 (98)
101 3nw4_A Gentisate 1,2-dioxygena 98.1 6.5E-06 2.2E-10 75.6 7.2 52 115-171 291-342 (368)
102 4e2q_A Ureidoglycine aminohydr 98.0 5.9E-06 2E-10 72.7 6.3 78 95-187 72-151 (266)
103 2cav_A Protein (canavalin); vi 98.0 3.8E-05 1.3E-09 71.9 10.7 69 113-183 291-371 (445)
104 3kgl_A Cruciferin; 11S SEED gl 97.9 2.2E-05 7.4E-10 74.1 8.6 80 91-182 42-181 (466)
105 3gbg_A TCP pilus virulence reg 97.9 1.4E-05 4.8E-10 67.7 6.5 54 113-169 19-72 (276)
106 3s7i_A Allergen ARA H 1, clone 97.9 3.6E-05 1.2E-09 71.6 9.5 70 114-185 55-128 (418)
107 1sfn_A Conserved hypothetical 97.9 3E-05 1E-09 66.3 7.8 42 123-169 68-109 (246)
108 2q1z_B Anti-sigma factor CHRR, 97.9 2.4E-05 8.3E-10 65.2 6.9 57 113-178 135-191 (195)
109 3ebr_A Uncharacterized RMLC-li 97.8 3.3E-05 1.1E-09 62.7 6.6 95 94-207 43-145 (159)
110 2y0o_A Probable D-lyxose ketol 97.7 6.7E-05 2.3E-09 62.4 6.8 60 113-172 63-145 (175)
111 3es4_A Uncharacterized protein 97.7 0.00012 4.1E-09 57.1 7.8 51 117-171 55-105 (116)
112 3myx_A Uncharacterized protein 97.6 0.0003 1E-08 61.0 9.8 68 121-194 63-135 (238)
113 3fz3_A Prunin; TREE NUT allerg 97.5 0.00012 4E-09 70.2 6.9 35 148-182 174-208 (531)
114 3cjx_A Protein of unknown func 97.5 7.1E-05 2.4E-09 61.3 3.7 60 95-170 45-104 (165)
115 3st7_A Capsular polysaccharide 97.5 0.00053 1.8E-08 60.0 9.5 66 114-179 283-352 (369)
116 3o14_A Anti-ecfsigma factor, C 97.3 0.00044 1.5E-08 59.0 6.7 64 96-179 46-109 (223)
117 3bal_A Acetylacetone-cleaving 97.0 0.0011 3.7E-08 54.0 5.8 66 94-172 47-112 (153)
118 3myx_A Uncharacterized protein 96.7 0.0036 1.2E-07 54.1 7.4 47 120-170 183-229 (238)
119 2pa7_A DTDP-6-deoxy-3,4-keto-h 96.4 0.012 4.2E-07 46.9 8.3 68 114-184 46-115 (141)
120 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.2 0.012 4.1E-07 49.6 7.4 61 113-173 70-136 (197)
121 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.1 0.017 5.7E-07 48.1 7.8 60 113-172 58-128 (185)
122 3ejk_A DTDP sugar isomerase; Y 96.0 0.054 1.8E-06 44.6 10.3 60 113-172 63-132 (174)
123 2ixk_A DTDP-4-dehydrorhamnose 96.0 0.023 7.8E-07 47.2 7.8 60 113-172 59-129 (184)
124 2qnk_A 3-hydroxyanthranilate 3 96.0 0.019 6.4E-07 51.1 7.7 47 124-175 227-273 (286)
125 3ryk_A DTDP-4-dehydrorhamnose 95.8 0.034 1.2E-06 47.1 8.3 61 113-173 80-152 (205)
126 1dzr_A DTDP-4-dehydrorhamnose 95.7 0.037 1.3E-06 45.9 8.0 61 113-173 57-129 (183)
127 1eyb_A Homogentisate 1,2-dioxy 95.7 0.019 6.7E-07 54.1 7.0 57 121-182 176-232 (471)
128 3eqe_A Putative cystein deoxyg 95.4 0.1 3.5E-06 42.6 9.6 71 114-184 80-155 (171)
129 1yud_A Hypothetical protein SO 95.2 0.074 2.5E-06 43.9 8.2 73 114-188 60-139 (170)
130 2c0z_A NOVW; isomerase, epimer 95.1 0.065 2.2E-06 45.7 7.9 61 113-173 65-137 (216)
131 2gm6_A Cysteine dioxygenase ty 95.0 0.13 4.5E-06 43.1 9.3 72 113-184 89-169 (208)
132 1wlt_A 176AA long hypothetical 94.9 0.11 3.8E-06 43.6 8.4 60 113-172 75-146 (196)
133 1oi6_A PCZA361.16; epimerase, 94.1 0.26 9E-06 41.5 9.1 61 113-173 57-129 (205)
134 2qjv_A Uncharacterized IOLB-li 93.7 0.14 4.9E-06 45.0 6.9 74 116-192 168-258 (270)
135 4gjz_A Lysine-specific demethy 93.6 0.15 5.2E-06 41.3 6.6 52 119-170 140-225 (235)
136 3o14_A Anti-ecfsigma factor, C 93.6 0.073 2.5E-06 45.2 4.8 50 114-173 157-206 (223)
137 1upi_A DTDP-4-dehydrorhamnose 93.6 0.38 1.3E-05 41.2 9.3 61 113-173 76-148 (225)
138 3kmh_A D-lyxose isomerase; cup 93.5 0.17 5.7E-06 44.1 6.9 59 113-171 116-197 (246)
139 2vec_A YHAK, pirin-like protei 93.3 0.42 1.4E-05 41.4 9.2 65 115-183 76-144 (256)
140 3bb6_A Uncharacterized protein 93.1 0.75 2.6E-05 36.2 9.5 73 112-184 23-103 (127)
141 4hn1_A Putative 3-epimerase in 92.8 0.77 2.6E-05 38.7 9.8 61 113-173 54-126 (201)
142 2xdv_A MYC-induced nuclear ant 91.6 0.69 2.4E-05 43.0 8.9 55 116-170 153-223 (442)
143 4diq_A Lysine-specific demethy 91.1 0.85 2.9E-05 43.2 9.1 65 116-180 178-262 (489)
144 1qwr_A Mannose-6-phosphate iso 91.1 0.23 7.8E-06 44.1 4.9 24 147-170 159-182 (319)
145 3d8c_A Hypoxia-inducible facto 90.9 1.1 3.7E-05 40.0 9.1 65 117-181 197-297 (349)
146 1tq5_A Protein YHHW; bicupin, 90.1 1.4 4.8E-05 37.6 8.8 63 115-181 53-119 (242)
147 1dgw_X Canavalin; duplicated s 89.9 0.21 7.2E-06 35.9 3.0 29 114-142 47-76 (79)
148 1vrb_A Putative asparaginyl hy 89.7 1.3 4.3E-05 39.6 8.6 57 114-170 152-242 (342)
149 3eln_A Cysteine dioxygenase ty 89.2 4 0.00014 33.8 10.7 72 114-185 81-162 (200)
150 3al5_A HTYW5, JMJC domain-cont 88.7 0.88 3E-05 40.3 6.8 38 145-184 239-277 (338)
151 1zx5_A Mannosephosphate isomer 86.9 0.33 1.1E-05 42.8 2.8 26 145-170 157-182 (300)
152 1ywk_A 4-deoxy-L-threo-5-hexos 86.3 1.2 4.2E-05 39.5 6.2 50 116-165 196-249 (289)
153 1qwr_A Mannose-6-phosphate iso 86.2 1.1 3.6E-05 39.7 5.7 37 122-163 268-304 (319)
154 1zx5_A Mannosephosphate isomer 85.7 2.1 7.1E-05 37.6 7.3 51 122-181 246-298 (300)
155 2p17_A Pirin-like protein; GK1 85.1 3 0.0001 36.2 8.0 64 115-182 51-117 (277)
156 3uss_A Putative uncharacterize 85.0 10 0.00035 31.7 11.0 72 113-184 83-163 (211)
157 2wfp_A Mannose-6-phosphate iso 84.0 2.8 9.5E-05 38.3 7.6 54 120-181 339-392 (394)
158 1xru_A 4-deoxy-L-threo-5-hexos 84.0 2.6 8.8E-05 37.3 7.0 56 116-173 196-256 (282)
159 2rg4_A Uncharacterized protein 83.8 1.8 6.3E-05 36.0 5.8 57 113-169 113-192 (216)
160 3dl3_A Tellurite resistance pr 83.3 5.6 0.00019 30.8 8.0 59 125-184 40-101 (119)
161 2wfp_A Mannose-6-phosphate iso 83.1 0.78 2.7E-05 42.0 3.5 23 147-169 241-263 (394)
162 3k2o_A Bifunctional arginine d 82.5 1.8 6.2E-05 38.7 5.6 27 145-171 255-281 (336)
163 1pmi_A PMI, phosphomannose iso 80.8 4.6 0.00016 37.5 7.8 58 121-181 377-438 (440)
164 1dgw_Y Canavalin; duplicated s 79.5 5 0.00017 29.7 6.2 36 146-183 6-41 (93)
165 1j1l_A Pirin; beta sandwich, c 77.3 6.8 0.00023 34.3 7.5 63 116-182 53-119 (290)
166 3kv4_A PHD finger protein 8; e 76.9 3.3 0.00011 38.6 5.6 46 126-171 256-326 (447)
167 3pua_A GRC5, PHD finger protei 76.5 2 7E-05 39.5 4.0 28 143-170 241-268 (392)
168 3k3o_A PHF8, PHD finger protei 76.2 2.1 7.3E-05 39.1 4.0 28 143-170 214-241 (371)
169 1pmi_A PMI, phosphomannose iso 76.1 1.8 6.1E-05 40.2 3.5 23 147-169 267-289 (440)
170 3pur_A Lysine-specific demethy 74.3 2.5 8.4E-05 40.5 4.0 29 143-171 363-391 (528)
171 2yu1_A JMJC domain-containing 73.0 4 0.00014 38.1 5.1 29 143-171 263-291 (451)
172 3kv5_D JMJC domain-containing 72.4 2.9 9.9E-05 39.4 4.0 56 116-171 279-361 (488)
173 3kv9_A JMJC domain-containing 71.3 3.3 0.00011 38.2 4.0 28 143-170 242-269 (397)
174 2oyz_A UPF0345 protein VPA0057 71.1 16 0.00054 27.2 7.0 46 123-171 41-86 (94)
175 2ypd_A Probable JMJC domain-co 70.7 4.6 0.00016 37.3 4.8 37 146-183 293-330 (392)
176 2xxz_A Lysine-specific demethy 69.4 5.7 0.00019 35.8 5.0 41 145-187 278-318 (332)
177 2qdr_A Uncharacterized protein 67.4 7.5 0.00026 34.4 5.2 30 120-165 235-264 (303)
178 2pqq_A Putative transcriptiona 66.2 17 0.00058 26.0 6.4 57 123-179 46-106 (149)
179 3avr_A Lysine-specific demethy 58.8 11 0.00037 36.0 5.0 43 145-189 337-379 (531)
180 4ask_A Lysine-specific demethy 57.5 8.2 0.00028 36.7 3.9 41 145-187 312-352 (510)
181 3mdp_A Cyclic nucleotide-bindi 57.3 20 0.00068 25.5 5.3 57 123-179 47-110 (142)
182 3dn7_A Cyclic nucleotide bindi 57.0 23 0.00078 26.9 5.9 57 123-179 48-109 (194)
183 2qdr_A Uncharacterized protein 56.8 9.5 0.00032 33.8 3.9 36 119-164 107-143 (303)
184 2fmy_A COOA, carbon monoxide o 55.2 46 0.0016 25.8 7.6 35 123-158 45-80 (220)
185 3dv8_A Transcriptional regulat 55.0 41 0.0014 25.9 7.2 57 123-179 44-106 (220)
186 1xe7_A YML079WP, hypothetical 54.2 49 0.0017 27.7 7.8 54 116-169 93-152 (203)
187 1yll_A PA5104, conserved hypot 52.6 19 0.00063 30.0 4.9 55 121-180 138-196 (200)
188 3b02_A Transcriptional regulat 52.3 36 0.0012 26.0 6.4 57 123-179 17-76 (195)
189 3idb_B CAMP-dependent protein 51.7 53 0.0018 24.1 7.1 56 123-179 79-138 (161)
190 3eo6_A Protein of unknown func 51.3 27 0.00092 26.5 5.2 44 123-169 54-97 (106)
191 1ft9_A Carbon monoxide oxidati 51.1 50 0.0017 25.7 7.2 34 123-157 41-75 (222)
192 1uhe_A Aspartate 1-decarboxyla 50.7 2.2 7.6E-05 32.1 -0.9 30 127-160 32-63 (97)
193 3iwz_A CAP-like, catabolite ac 50.3 46 0.0016 25.8 6.8 35 123-157 52-87 (230)
194 3hqx_A UPF0345 protein aciad03 49.2 59 0.002 24.8 6.9 46 123-171 57-102 (111)
195 2a1x_A Phytanoyl-COA dioxygena 47.5 24 0.00081 29.8 5.0 46 143-188 213-261 (308)
196 3loi_A Putative uncharacterize 46.8 1E+02 0.0035 25.0 8.4 55 114-168 64-126 (172)
197 2qjv_A Uncharacterized IOLB-li 45.9 93 0.0032 27.0 8.6 68 89-171 25-102 (270)
198 2oz6_A Virulence factor regula 44.7 75 0.0026 24.1 7.1 35 123-157 31-66 (207)
199 3ryp_A Catabolite gene activat 44.0 51 0.0018 25.1 6.1 35 123-157 37-72 (210)
200 4ev0_A Transcription regulator 43.3 46 0.0016 25.5 5.7 57 123-179 40-100 (216)
201 2opw_A Phyhd1 protein; double- 42.7 21 0.00072 29.8 3.8 41 143-183 225-268 (291)
202 3fx3_A Cyclic nucleotide-bindi 42.2 51 0.0017 25.8 5.9 34 123-156 52-86 (237)
203 2rdq_A 1-deoxypentalenic acid 41.6 25 0.00086 29.2 4.2 40 143-182 208-253 (288)
204 3d0s_A Transcriptional regulat 40.7 58 0.002 25.3 6.0 57 123-179 47-107 (227)
205 3opt_A DNA damage-responsive t 40.5 38 0.0013 30.9 5.4 54 145-200 304-357 (373)
206 1o5l_A Transcriptional regulat 40.4 47 0.0016 25.8 5.4 34 123-156 40-74 (213)
207 3gyd_A CNMP-BD protein, cyclic 40.1 65 0.0022 24.7 6.1 34 123-156 80-114 (187)
208 2bgc_A PRFA; bacterial infecti 39.3 61 0.0021 25.6 6.0 37 123-159 36-72 (238)
209 3kcc_A Catabolite gene activat 38.7 63 0.0022 26.1 6.1 57 123-179 87-148 (260)
210 1vc3_B L-aspartate-alpha-decar 38.5 16 0.00054 27.4 2.1 28 128-159 34-64 (96)
211 1zyb_A Transcription regulator 38.2 60 0.0021 25.5 5.8 64 80-157 31-96 (232)
212 3i3q_A Alpha-ketoglutarate-dep 38.1 24 0.00082 29.3 3.4 43 126-168 134-178 (211)
213 3e97_A Transcriptional regulat 37.5 77 0.0026 24.6 6.3 35 123-157 47-82 (231)
214 2z69_A DNR protein; beta barre 36.0 27 0.00091 25.2 3.1 34 123-156 53-87 (154)
215 2zcw_A TTHA1359, transcription 35.6 55 0.0019 25.0 5.1 56 124-179 26-84 (202)
216 2lj0_A Sorbin and SH3 domain-c 35.4 17 0.0006 24.4 1.8 12 147-158 22-33 (65)
217 3la7_A Global nitrogen regulat 35.1 71 0.0024 25.3 5.8 34 123-156 61-95 (243)
218 4ava_A Lysine acetyltransferas 34.9 62 0.0021 27.0 5.6 57 123-179 54-113 (333)
219 2ptm_A Hyperpolarization-activ 33.9 63 0.0021 24.7 5.1 31 123-156 112-142 (198)
220 3e6c_C CPRK, cyclic nucleotide 33.3 77 0.0026 25.1 5.7 35 123-157 50-85 (250)
221 3g7d_A PHPD; non heme Fe(II) d 32.9 1.2E+02 0.0042 27.8 7.3 40 127-167 358-397 (443)
222 3pna_A CAMP-dependent protein 30.6 97 0.0033 22.5 5.5 31 123-157 79-109 (154)
223 2gau_A Transcriptional regulat 29.4 62 0.0021 25.2 4.4 85 80-179 23-111 (232)
224 3tht_A Alkylated DNA repair pr 29.3 30 0.001 30.9 2.8 40 126-165 226-265 (345)
225 2fct_A Syringomycin biosynthes 28.7 39 0.0013 28.4 3.3 28 143-170 217-244 (313)
226 3plx_B Aspartate 1-decarboxyla 28.6 7.4 0.00025 29.5 -1.2 30 127-160 33-64 (102)
227 2d93_A RAP guanine nucleotide 28.5 95 0.0033 21.9 5.0 53 123-179 58-114 (134)
228 2qfe_A Calpain-7; C2-like doma 28.4 36 0.0012 26.6 2.8 33 147-184 109-141 (148)
229 3dxt_A JMJC domain-containing 28.3 73 0.0025 28.8 5.1 48 144-193 260-307 (354)
230 3oug_A Aspartate 1-decarboxyla 27.5 9.4 0.00032 29.4 -0.8 29 127-159 60-91 (114)
231 3gja_A CYTC3; halogenase, beta 27.4 34 0.0012 29.6 2.7 41 143-183 219-264 (319)
232 3r8s_R 50S ribosomal protein L 26.8 53 0.0018 24.5 3.3 48 135-192 4-52 (103)
233 2qcs_B CAMP-dependent protein 26.4 1.3E+02 0.0045 24.1 6.1 34 123-156 198-233 (291)
234 3bpz_A Potassium/sodium hyperp 25.9 71 0.0024 24.5 4.2 53 123-179 113-168 (202)
235 2vec_A YHAK, pirin-like protei 24.5 1.7E+02 0.0058 24.8 6.6 43 125-171 204-246 (256)
236 2ox0_A JMJC domain-containing 24.4 90 0.0031 28.4 5.0 45 144-190 278-322 (381)
237 3shr_A CGMP-dependent protein 24.2 1.5E+02 0.005 24.1 6.0 57 123-179 198-259 (299)
238 1ywk_A 4-deoxy-L-threo-5-hexos 23.3 1.4E+02 0.0047 26.3 5.8 42 123-169 79-121 (289)
239 3v2d_V 50S ribosomal protein L 23.2 63 0.0021 24.0 3.1 21 135-160 4-24 (101)
240 1o7f_A CAMP-dependent RAP1 gua 23.1 1.7E+02 0.0056 25.6 6.5 57 123-179 83-144 (469)
241 1tq5_A Protein YHHW; bicupin, 23.1 2.3E+02 0.0077 23.7 7.0 38 125-171 183-220 (242)
242 2c45_A Aspartate 1-decarboxyla 22.9 12 0.00042 29.7 -0.9 29 128-160 58-89 (139)
243 2fpe_A C-JUN-amino-terminal ki 22.4 32 0.0011 22.0 1.2 12 147-158 19-30 (62)
244 2fi9_A Outer membrane protein; 22.3 33 0.0011 26.2 1.5 27 132-166 22-48 (128)
245 1znp_A Hypothetical protein AT 22.2 2.8E+02 0.0095 22.0 7.0 56 114-169 51-114 (154)
246 1pqh_A Aspartate 1-decarboxyla 21.9 11 0.00038 30.1 -1.4 29 127-159 74-105 (143)
247 3rnj_A Brain-specific angiogen 21.9 53 0.0018 21.3 2.3 36 148-189 25-60 (67)
248 3m3i_A Putative uncharacterize 21.9 2.8E+02 0.0096 23.5 7.3 56 115-170 72-162 (225)
249 3ocp_A PRKG1 protein; serine/t 21.5 1.4E+02 0.0046 21.1 4.7 31 123-157 64-94 (139)
250 2iuw_A Alkylated repair protei 20.8 1.1E+02 0.0036 25.5 4.4 39 126-164 157-205 (238)
251 1wgp_A Probable cyclic nucleot 20.8 23 0.00078 25.2 0.2 33 123-156 47-82 (137)
252 1s4c_A Protein HI0227; double- 20.8 1.2E+02 0.004 23.5 4.4 23 147-169 113-135 (155)
253 1xru_A 4-deoxy-L-threo-5-hexos 20.6 1.6E+02 0.0055 25.7 5.7 41 124-169 80-121 (282)
254 2fvt_A Conserved hypothetical 20.5 35 0.0012 26.5 1.2 27 132-166 20-46 (135)
255 4e6r_A Cytoplasmic protein NCK 20.2 51 0.0017 20.5 1.8 12 147-158 17-28 (58)
No 1
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=100.00 E-value=4.1e-54 Score=365.03 Aligned_cols=180 Identities=61% Similarity=1.125 Sum_probs=171.6
Q ss_pred cccceEEEEecCCCCCCCCCCCCCCCCCCCHHHHhhcCeEEEEcCCCCCCChHHHHHHHHHcCCCeeeeeeeCccCccCh
Q 027870 29 KFEFNQAWFMDESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNPKNYENDEELQKIREARGYSYMDLLDLCPEKVTNY 108 (217)
Q Consensus 29 ~~~m~~aw~~d~~~~d~~lph~~~p~~~vs~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~e~Gy~~~Dvi~i~p~~~p~y 108 (217)
.--||||||||++++|||+||+++|+++||+++|+++||+||+++++.++++.+|++|++++||.+.|+++++++.+|||
T Consensus 10 ~~~~~~~~~~~~~~~d~~~ph~~~~~~~v~~~~L~~~GV~~w~~~~~~~~~~~~l~~l~~~~gy~~~D~v~~~p~~~p~~ 89 (191)
T 1vr3_A 10 HHHMVQAWYMDESTADPRKPHRAQPDRPVSLEQLRTLGVLYWKLDADKYENDPELEKIRKMRNYSWMDIITICKDTLPNY 89 (191)
T ss_dssp ---CCEEEEBCSCCSCTTSCCBCSSCCBCCHHHHHHTTCEEEECCGGGTTSCHHHHHHHHHHTCCEEEEEEESTTTSTTH
T ss_pred hhhhheeeeccCCccccCcccccCCCCccCHHHHHhcCcEEEECCCccccccHHHHHHHHhcCCCceeEEEECCCcCcch
Confidence 34699999999999999999999999999999999999999999987777789999999999999999999999877999
Q ss_pred HHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEE
Q 027870 109 EEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 188 (217)
Q Consensus 109 ~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~ 188 (217)
++++..++.+|+|+++|++||++|+|+|.+++.+|+|+++.|++||+|+||+|++|||+++++++++|||||.++|||+|
T Consensus 90 ~~k~~~~~~~H~H~~~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~~W~~ 169 (191)
T 1vr3_A 90 EEKIKMFFEEHLHLDEEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEPVWTP 169 (191)
T ss_dssp HHHHHHHHSCEECSSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSCCCCC
T ss_pred hhhhccCCcceECCcceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCCCccC
Confidence 99999999999999999999999999999998778999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCcHHHHHHHHhhcC
Q 027870 189 YNRPQEDHPARKEYIKGLTG 208 (217)
Q Consensus 189 ~~r~~d~~~~R~~y~~~~~~ 208 (217)
++||+|++++|++||++|..
T Consensus 170 ~~r~~~~~~~r~~y~~~~~~ 189 (191)
T 1vr3_A 170 YNRPADHFDARVQYMSFLEG 189 (191)
T ss_dssp EESCCTTSHHHHHHHHHHHH
T ss_pred CCCchhccHHHHHHHHHhhh
Confidence 99999999999999999864
No 2
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=100.00 E-value=6.2e-34 Score=238.69 Aligned_cols=156 Identities=24% Similarity=0.420 Sum_probs=130.6
Q ss_pred cCCCCCCCCCCCCCCCCCCCHHHHhhcCeEEEEcCC--C---CCCC-------hHHHHHHHHHcCCCeeeeeeeCccCcc
Q 027870 39 DESSQDQRLPHHLNPKQFVSLDQLAELGVLYWRLNP--K---NYEN-------DEELQKIREARGYSYMDLLDLCPEKVT 106 (217)
Q Consensus 39 d~~~~d~~lph~~~p~~~vs~~~L~~~GV~~w~~~~--~---~~~~-------~~~l~~l~~e~Gy~~~Dvi~i~p~~~p 106 (217)
+++++..++....+++.+ +++|+++||.||++++ + +.+. +++|++|++++||.+.|+++++++. |
T Consensus 7 ~~~~~~~~~~~~~~~~~i--~~~L~~~gV~~~~~~~~~~~~~~~~~~~~l~a~~~~~~~l~~~~gy~~~D~i~~~~~~-p 83 (179)
T 1zrr_A 7 SVKDPQNSLWHSTNAEEI--QQQLNAKGVRFERWQADRDLGAAPTAETVIAAYQHAIDKLVAEKGYQSWDVISLRADN-P 83 (179)
T ss_dssp CSSCSSCEEEEECCSHHH--HHHHHHTTCCCCCCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHCCSEEEEECCCTTC-T
T ss_pred cCCCcCCcceeeCCHHHH--HHHHHHcCcEEEEcCCCCccCCcccHHHHHHHHHHHHHHHHHHhCCCcccEEEEcCCC-C
Confidence 333334343344456555 9999999999955543 2 2111 2579999999999999999999885 9
Q ss_pred ChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCce
Q 027870 107 NYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 186 (217)
Q Consensus 107 ~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW 186 (217)
+++++++.|+.+|.|+++|++||++|+|+|.++ .+|+|+++.|++||+|+||+|++|||.++++++++|||+|.++|||
T Consensus 84 ~~~~~~~~~~~~H~H~~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~~~w 162 (179)
T 1zrr_A 84 QKEALREKFLNEHTHGEDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNPEGW 162 (179)
T ss_dssp HHHHHHHHHHSCBEESSCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCGGGE
T ss_pred ChhHhhcccccceECChheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCCCCc
Confidence 999999999999999999999999999999998 5788999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCcHHH
Q 027870 187 TAYNRPQEDHPAR 199 (217)
Q Consensus 187 ~~~~r~~d~~~~R 199 (217)
+|++|+. +++.|
T Consensus 163 ~~~~~g~-~ia~~ 174 (179)
T 1zrr_A 163 IAQFTGD-DIASA 174 (179)
T ss_dssp ESCSSCC-CSGGG
T ss_pred cccCCCc-hhHhh
Confidence 9988864 44433
No 3
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.16 E-value=1.4e-10 Score=83.65 Aligned_cols=64 Identities=22% Similarity=0.327 Sum_probs=55.7
Q ss_pred ccccccCCC-ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
....|.|+. +|+.||++|++.+.++++ .+.+++||++.+|+|+.|++.+.++.....+.++..+
T Consensus 40 ~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p~ 104 (105)
T 1v70_A 40 AQKVHVHEGSDKVYYALEGEVVVRVGEE-----EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAPR 104 (105)
T ss_dssp EEEEECCSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEESC
T ss_pred cCCccCCCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCCC
Confidence 356899985 799999999999999877 8999999999999999999998777777777776654
No 4
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.16 E-value=1.2e-10 Score=88.54 Aligned_cols=69 Identities=13% Similarity=0.209 Sum_probs=58.4
Q ss_pred ccccccCCC-ceEEEEEeceEEEEE-ecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC-CceEE
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDV-RDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE-PVWTA 188 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v-~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~-~gW~~ 188 (217)
....|.|.. +|++||++|++.+.+ +++ .+.+++||++++|+|+.|++.+.++..+..+-++... ++|.+
T Consensus 51 ~~~~H~H~~~~e~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p~~~~~~~ 122 (125)
T 3h8u_A 51 EIASHVHPHGQDTWTVISGEAEYHQGNGI-----VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAPGNAGFAL 122 (125)
T ss_dssp EECCC-CTTCEEEEEEEECEEEEECSTTC-----EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEESTTCCCCC
T ss_pred cCCcccCCCCeEEEEEEEeEEEEEECCCe-----EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECCCcccchh
Confidence 467999994 999999999999999 666 8999999999999999999999888888888887654 55554
No 5
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.11 E-value=2.1e-10 Score=86.27 Aligned_cols=67 Identities=12% Similarity=0.137 Sum_probs=58.0
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEE-EEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCce
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRI-WIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 186 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i-~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW 186 (217)
...+|.|+..|+.||++|++.+.+++. .+ .+++||++.||+|+.|++.+.++..+..+.++...+.+
T Consensus 39 ~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~ 106 (117)
T 2b8m_A 39 QMPKHYSNSYVHLIIIKGEMTLTLEDQ-----EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPKK 106 (117)
T ss_dssp BCCCEECSSCEEEEEEESEEEEEETTS-----CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGGG
T ss_pred cCCCEeCCCcEEEEEEeCEEEEEECCE-----EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCCC
Confidence 356899999999999999999999877 67 99999999999999999999877777777775655544
No 6
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.11 E-value=1.7e-10 Score=87.87 Aligned_cols=63 Identities=25% Similarity=0.292 Sum_probs=54.3
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
...+|+|+.+|+.||++|++.+.++++ .+.+++||.|.||+|+.|++.+.++..+..+-+|..
T Consensus 48 ~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p~ 110 (114)
T 3fjs_A 48 QVGSHSVAGPSTIQCLEGEVEIGVDGA-----QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLVD 110 (114)
T ss_dssp EEEEECCSSCEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC-
T ss_pred ccCceeCCCcEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeCC
Confidence 567899999999999999999999987 899999999999999999999987655555555544
No 7
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.05 E-value=7.3e-10 Score=84.23 Aligned_cols=62 Identities=19% Similarity=0.353 Sum_probs=54.0
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~ 181 (217)
....|.|+..|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.++..+..+-++-
T Consensus 46 ~~~~H~H~~~Ei~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f 107 (128)
T 4i4a_A 46 KSFRHSHNEYELFIVIQGNAIIRINDE-----DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWW 107 (128)
T ss_dssp ECCCBCCSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred ccCCEecCCeEEEEEEeCEEEEEECCE-----EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEE
Confidence 457899999999999999999999987 89999999999999999999987766666555543
No 8
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.04 E-value=4e-10 Score=84.39 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=47.6
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
....|.|+.+|+.||++|++.+.++++ .+.+++||+|++|+|+.|++.+.++
T Consensus 50 ~~~~H~h~~~e~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~~~ 101 (114)
T 2ozj_A 50 SVSEEEYFGDTLYLILQGEAVITFDDQ-----KIDLVPEDVLMVPAHKIHAIAGKGR 101 (114)
T ss_dssp SCCCBCCSSCEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCCBEEEEEEE
T ss_pred ccccEECCCCeEEEEEeCEEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCC
Confidence 356899999999999999999999987 8999999999999999999998653
No 9
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.04 E-value=7.9e-10 Score=81.24 Aligned_cols=62 Identities=18% Similarity=0.252 Sum_probs=54.3
Q ss_pred cccc--cCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 116 YTEH--IHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 116 ~~eH--~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
...| .|+ .+|+.||++|++.+.++++ .+.+++||++.||+|+.|++.+.++.....+-++..
T Consensus 34 ~~~h~~~H~~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 34 EGGPDNRHRGADQWLFVVDGAGEAIVDGH-----TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EECCCSSSCCCEEEEEEEECCEEEEETTE-----EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred cCCcccccCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 4567 998 7999999999999999877 899999999999999999999877777777776654
No 10
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.03 E-value=1.6e-09 Score=89.89 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=58.8
Q ss_pred cccccCCC---ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 116 YTEHIHAD---EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 116 ~~eH~H~~---dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
...|.|.. +|++||++|++.+.+++..++++.+.+++||+|+||+|+.|++.+.++..++.+-++...
T Consensus 86 ~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 86 TKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred CCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 45788863 799999999999999988788889999999999999999999999877777777666543
No 11
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.03 E-value=7.4e-10 Score=83.96 Aligned_cols=61 Identities=21% Similarity=0.315 Sum_probs=54.1
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~ 181 (217)
....|.|+.+|+.||++|++.+.+++. .+.+++||++.||+|+.|++.+.++ ....+-+|.
T Consensus 53 ~~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~ 113 (126)
T 4e2g_A 53 EMPAHEHPHEQAGVMLEGTLELTIGEE-----TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFS 113 (126)
T ss_dssp EEEEECCSSEEEEEEEEECEEEEETTE-----EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEE
T ss_pred cCCCccCCCceEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEEC
Confidence 357899999999999999999999887 8999999999999999999998766 566666665
No 12
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.02 E-value=9.3e-10 Score=81.99 Aligned_cols=52 Identities=23% Similarity=0.326 Sum_probs=48.0
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
...+|.|+.+|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.++
T Consensus 52 ~~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~ 103 (115)
T 1yhf_A 52 EIGRHSSPGDAMVTILSGLAEITIDQE-----TYRVAEGQTIVMPAGIPHALYAVEA 103 (115)
T ss_dssp EEEEECCSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTSCEEEEESSC
T ss_pred ccCCEECCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEECCC
Confidence 367899999999999999999999877 8999999999999999999998774
No 13
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.02 E-value=7.6e-10 Score=85.04 Aligned_cols=63 Identities=22% Similarity=0.216 Sum_probs=55.4
Q ss_pred cccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 116 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 116 ~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
+..|.|+..|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..+..+-++..+
T Consensus 61 ~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~~~ 123 (126)
T 1vj2_A 61 IDRHSHPWEHEIFVLKGKLTVLKEQG-----EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIPKE 123 (126)
T ss_dssp EEEECCSSCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEEGG
T ss_pred CCceeCCCcEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 56899999999999999999999987 8999999999999999999998776667776666543
No 14
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.02 E-value=2.2e-09 Score=87.38 Aligned_cols=64 Identities=9% Similarity=0.155 Sum_probs=57.1
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC-CCcEEEEEEEcCC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~-~~~~~aiRlF~~~ 183 (217)
....|.|..+|++||++|++.+.++++ .+.+++||+|+||+|+.|++.+.+ +..+..+-++..+
T Consensus 68 ~~~~H~H~~~E~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 68 YTTLERHEHTHVVMVVRGHAEVVLDDR-----VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp BCCCBBCSSCEEEEEEESEEEEEETTE-----EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred CCCCccCCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 467899999999999999999999987 899999999999999999999877 7777777776654
No 15
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.00 E-value=1e-09 Score=84.59 Aligned_cols=64 Identities=23% Similarity=0.258 Sum_probs=56.6
Q ss_pred ccccccCCCceEEEEEeceEEEE--EecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFD--VRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~--v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
....|.|+..|+.||++|++.+. ++++ .+.+++||++.||+|+.|++.+.++..+..+-++...
T Consensus 51 ~~~~H~H~~~e~~~vl~G~~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 51 STPPHFHEWEHEIYVLEGSMGLVLPDQGR-----TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp ECCCEECSSCEEEEEEEECEEEEEGGGTE-----EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred cCCCccCCCceEEEEEEeEEEEEEeECCE-----EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 46789999999999999999999 8877 8999999999999999999999877777777776554
No 16
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=98.99 E-value=1.5e-09 Score=80.97 Aligned_cols=59 Identities=24% Similarity=0.260 Sum_probs=51.6
Q ss_pred cccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 027870 116 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 116 ~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~ 181 (217)
...|.|+.+|+.||++|++.+.++++ .+.+++||++.||+|+.|++.+.+ ....+-+|.
T Consensus 47 ~~~H~H~~~e~~~vl~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~~ 105 (116)
T 2pfw_A 47 GYVHAHRHSQVSYVVEGEFHVNVDGV-----IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTFS 105 (116)
T ss_dssp EEEECCSSEEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEESS--CEEEEEEEE
T ss_pred CCcEECCcceEEEEEeeEEEEEECCE-----EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEEC
Confidence 56899999999999999999999877 899999999999999999999876 345555554
No 17
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=98.99 E-value=6.4e-10 Score=80.69 Aligned_cols=51 Identities=31% Similarity=0.536 Sum_probs=47.2
Q ss_pred ccccccCCC-ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
....|.|+. +|+.||++|++.+.++++ .+.+++||+++||+|+.|++.+.+
T Consensus 41 ~~~~H~H~~~~e~~~v~~G~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~ 92 (102)
T 3d82_A 41 EFVWHEHADTDEVFIVMEGTLQIAFRDQ-----NITLQAGEMYVIPKGVEHKPMAKE 92 (102)
T ss_dssp ECCCBCCTTCCEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTCCBEEEEEE
T ss_pred CCCceeCCCCcEEEEEEeCEEEEEECCE-----EEEEcCCCEEEECCCCeEeeEcCC
Confidence 367999998 999999999999999987 899999999999999999998864
No 18
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=98.97 E-value=1.7e-09 Score=86.38 Aligned_cols=70 Identities=19% Similarity=0.161 Sum_probs=57.2
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCC----CcEEEEEEeCCCEEEeCCCCeeeeeeCC-CCcEEEEEEEcCCC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDES----DQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKLMRLFVGEP 184 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~----d~wi~i~v~~GDlIiIPaG~~H~F~~~~-~~~~~aiRlF~~~~ 184 (217)
....|.|..+|+.||++|++.+.+++.+ ++.-++.+++||++.||+|+.|++.+.+ +..+..+-++...+
T Consensus 53 ~~~~H~H~~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~ 127 (163)
T 1lr5_A 53 RTPIHRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPP 127 (163)
T ss_dssp BCCEEEESSCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESSS
T ss_pred cCCCeECCCCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCCC
Confidence 3568999999999999999999999721 1112789999999999999999999877 66777777766554
No 19
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=98.97 E-value=2.4e-09 Score=85.26 Aligned_cols=68 Identities=21% Similarity=0.294 Sum_probs=60.3
Q ss_pred cccccC-CCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCC-CeeeeeeCCCCcEEEEEEEcCCCceEE
Q 027870 116 YTEHIH-ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG-IYHRFTLDTSNYVKLMRLFVGEPVWTA 188 (217)
Q Consensus 116 ~~eH~H-~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG-~~H~F~~~~~~~~~aiRlF~~~~gW~~ 188 (217)
...|.| ..+|++||++|++.+.++++ .+.+++||.|+||+| +.|++.+.++..+..+-++...+.-+.
T Consensus 60 ~~~H~H~~~~E~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~~~~~~ 129 (162)
T 3l2h_A 60 TEYHLHHYEEEAVYVLSGKGTLTMEND-----QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRLDQDVV 129 (162)
T ss_dssp SSSBEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECCSEEEE
T ss_pred CCCccCCCCCEEEEEEEEEEEEEECCE-----EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECCCCCCeE
Confidence 578999 68999999999999999987 899999999999998 999999988888888888887765544
No 20
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=98.96 E-value=1.6e-09 Score=83.20 Aligned_cols=61 Identities=23% Similarity=0.363 Sum_probs=51.5
Q ss_pred cccccCCC-ceEEEEEeceEEEEEec-CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 116 YTEHIHAD-EEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 116 ~~eH~H~~-dEiryileG~g~f~v~~-~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
..+|.|+. +|+.||++|++.+.+++ + .+.+++||+++||+|+.|++.+..+. .+.+-++..
T Consensus 56 ~~~H~H~~~~E~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~~p 118 (134)
T 2o8q_A 56 PTWHTHTVGFQLFYVLRGWVEFEYEDIG-----AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIVSP 118 (134)
T ss_dssp CCCEEECCSCEEEEEEESEEEEEETTTE-----EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEESS
T ss_pred CCCEECCCCcEEEEEEeCEEEEEECCcE-----EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEECC
Confidence 57899997 99999999999999997 6 89999999999999999999985543 355545443
No 21
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=98.95 E-value=1.2e-09 Score=88.55 Aligned_cols=66 Identities=18% Similarity=0.271 Sum_probs=58.7
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCc
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPV 185 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~g 185 (217)
....|.|..+|+.||++|++.+.++++ .+.+++||+|+||+|+.|++.+.++..+..+.++..+..
T Consensus 56 ~~~~H~H~~~E~~~Vl~G~~~v~v~g~-----~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~d 121 (156)
T 3kgz_A 56 YSTLERHAHVHAVMIHRGHGQCLVGET-----ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAARD 121 (156)
T ss_dssp ECCCBBCSSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSCC
T ss_pred ccCceeCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCCC
Confidence 356899999999999999999999987 899999999999999999999988778888877776543
No 22
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=98.95 E-value=3.8e-09 Score=83.34 Aligned_cols=69 Identities=19% Similarity=0.254 Sum_probs=57.2
Q ss_pred ccccccCC-CceEEEEEeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 115 FYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~-~dEiryileG~g~f~v~~~~d-~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
....|.|. .+|++||++|++.+.+++..+ .|+++.+++||+|+||+|+.|++.+.++..+..+-++...
T Consensus 55 ~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 55 DIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp BCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred ccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 45789998 469999999999999997732 2455999999999999999999998877777777776543
No 23
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.95 E-value=3e-09 Score=84.39 Aligned_cols=64 Identities=17% Similarity=0.292 Sum_probs=56.7
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEE-EEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIR-IWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~-i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
....|.|+..|+.||++|++.+.++++ . +.+++||+|+||+|+.|++.+.++..+..+.++...
T Consensus 60 ~~~~H~H~~~E~~~Vl~G~~~~~~~~~-----~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~~ 124 (147)
T 2f4p_A 60 RTHWHSHPGGQILIVTRGKGFYQERGK-----PARILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQV 124 (147)
T ss_dssp EECSEECTTCEEEEEEEEEEEEEETTS-----CCEEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECCG
T ss_pred ccCceECCCceEEEEEeCEEEEEECCE-----EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 346899999999999999999999987 6 899999999999999999999887778877777653
No 24
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=98.95 E-value=3e-09 Score=78.08 Aligned_cols=62 Identities=26% Similarity=0.252 Sum_probs=52.3
Q ss_pred ccccccCCC-ceE-EEEEeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 115 FYTEHIHAD-EEI-RYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~~-dEi-ryileG~g~f~v~-~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
....|.|+. .|+ .||++|++.+.++ ++ .+.+++||+++||+|+.|++.+.++ ...+-+|..+
T Consensus 45 ~~~~H~H~~~~e~~~~vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~~~p~ 109 (110)
T 2q30_A 45 ELPVHSHNIEGELNIVVLEGEGEFVGDGDA-----VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVTIAPP 109 (110)
T ss_dssp EEEEECCSSSCEEEEEEEESCEEEECGGGC-----EEEECTTEEEEEETTSCEEEEESSS--EEEEEEEESC
T ss_pred cCCcccCCCCccEEEEEEeCEEEEEeCCCE-----EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEEECCC
Confidence 467899985 688 8999999999998 57 8999999999999999999998765 4556666543
No 25
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=98.93 E-value=3.3e-09 Score=86.77 Aligned_cols=64 Identities=19% Similarity=0.211 Sum_probs=57.1
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
....|.|..+|++||++|++.+.++++ .+.+++||+|+||+|+.|++.+..+..+..+-++..+
T Consensus 65 ~~~~H~H~~~E~~~Vl~G~~~~~v~g~-----~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 65 HSTLERHQHAHGVMILKGRGHAMVGRA-----VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp ECCCBBCSSCEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred ccCceeCCCcEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 457899999999999999999999987 8999999999999999999998877777777776654
No 26
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=98.91 E-value=1.4e-09 Score=80.65 Aligned_cols=50 Identities=26% Similarity=0.504 Sum_probs=44.2
Q ss_pred cccccCCC-ceEEEEEeceEEEEEec-CCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 116 YTEHIHAD-EEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 116 ~~eH~H~~-dEiryileG~g~f~v~~-~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
+.+|.|+. +|+.||++|++.+.+++ . .+.+++||.++||+|+.|++.+.+
T Consensus 40 ~~~H~H~~~~E~~~Vl~G~~~~~~~~~~-----~~~l~~Gd~~~ip~~~~H~~~~~~ 91 (107)
T 2i45_A 40 YGWHTHGYSDKVLFAVEGDMAVDFADGG-----SMTIREGEMAVVPKSVSHRPRSEN 91 (107)
T ss_dssp CCCBCC--CCEEEEESSSCEEEEETTSC-----EEEECTTEEEEECTTCCEEEEEEE
T ss_pred CcceeCCCCCEEEEEEeCEEEEEECCCc-----EEEECCCCEEEECCCCcEeeEeCC
Confidence 35899997 99999999999999998 6 899999999999999999999853
No 27
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=98.91 E-value=7.3e-09 Score=86.27 Aligned_cols=73 Identities=19% Similarity=0.263 Sum_probs=60.9
Q ss_pred ccccccCCC-ceEEEEEeceEEEEEecCC---CcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC-CceE
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDVRDES---DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE-PVWT 187 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v~~~~---d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~-~gW~ 187 (217)
....|+|+. +|+.||++|++.+.+.+.+ ++.+...+++||+++||+|+.|++.+.++..+.++-+|... +|..
T Consensus 84 ~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~~~ 161 (201)
T 1fi2_A 84 TNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIV 161 (201)
T ss_dssp EEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCCCE
T ss_pred CCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCCeE
Confidence 467899995 7999999999999997554 67778999999999999999999998777778888777643 4433
No 28
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=98.86 E-value=6.8e-09 Score=83.92 Aligned_cols=64 Identities=22% Similarity=0.263 Sum_probs=56.6
Q ss_pred ccccCCC-ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCC--CeeeeeeCCCCcEEEEEEEcCCCc
Q 027870 117 TEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAG--IYHRFTLDTSNYVKLMRLFVGEPV 185 (217)
Q Consensus 117 ~eH~H~~-dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG--~~H~F~~~~~~~~~aiRlF~~~~g 185 (217)
..|.|.. +|++||++|++.+.++++ .+.+++||.|.||+| +.|++.+..+..++.+-++...+.
T Consensus 58 ~~H~H~~~eE~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~~~ 124 (163)
T 3i7d_A 58 LRHYHMEQDEFVMVTEGALVLVDDQG-----EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTRTPT 124 (163)
T ss_dssp SSEEESSCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEECCSC
T ss_pred CCccCCCCcEEEEEEECEEEEEECCE-----EEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECCCCC
Confidence 5899987 799999999999999987 899999999999999 999999987777887777666543
No 29
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=98.86 E-value=6.9e-09 Score=76.20 Aligned_cols=59 Identities=12% Similarity=0.127 Sum_probs=50.2
Q ss_pred cccccCCCc-eEEEEEeceEEEEEec--CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 116 YTEHIHADE-EIRYCLEGSGYFDVRD--ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 116 ~~eH~H~~d-EiryileG~g~f~v~~--~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
..+|.|+.+ |+.||++|++.+.+++ + .+.+++||.+.+|+|+.|++.+..+..++.+.+
T Consensus 31 ~~~H~H~~~~e~~~Vl~G~~~~~~~~g~~-----~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 31 TGWHRHSMDYVVVPMTTGPLLLETPEGSV-----TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp CCSEECCSCEEEEESSCEEEEEEETTEEE-----EEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred CCCEECCCCcEEEEEeecEEEEEeCCCCE-----EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 558999975 6999999999999986 5 789999999999999999999877666555443
No 30
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.85 E-value=7.2e-09 Score=78.78 Aligned_cols=59 Identities=15% Similarity=0.207 Sum_probs=49.2
Q ss_pred cccCCCceEEEEEeceEEEEEecCCCcEEE--EEEeCCCEEEeCCCCeeeeeeCCCC-cEEEEEEEc
Q 027870 118 EHIHADEEIRYCLEGSGYFDVRDESDQWIR--IWIKAGDLIVLPAGIYHRFTLDTSN-YVKLMRLFV 181 (217)
Q Consensus 118 eH~H~~dEiryileG~g~f~v~~~~d~wi~--i~v~~GDlIiIPaG~~H~F~~~~~~-~~~aiRlF~ 181 (217)
+|.|..+|+.||++|++.+.++++ . +.+++||.|.||+|+.|++.+.++. ....+-+|.
T Consensus 48 ~~~~~~~E~~~Vl~G~~~l~~~~~-----~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 48 WYDSPQDEWVMVVSGSAGIECEGD-----TAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp CBCCSSEEEEEEEESCEEEEETTC-----SSCEEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred cccCCccEEEEEEeCeEEEEECCE-----EEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 367889999999999999999987 6 8999999999999999999876543 444455554
No 31
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=98.85 E-value=8.6e-09 Score=78.40 Aligned_cols=60 Identities=22% Similarity=0.379 Sum_probs=50.2
Q ss_pred cccCCCce-EEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 118 EHIHADEE-IRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 118 eH~H~~dE-iryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
.|.|+..| ++||++|++.+.++++ .+.+++||+++||+|+.|++.+.++..+..+-++..
T Consensus 42 ~H~H~~~e~~~~vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~ 102 (125)
T 3cew_A 42 VHSHKQNEEIYGILSGKGFITIDGE-----KIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVK 102 (125)
T ss_dssp EEEESSEEEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEE
T ss_pred CccCCCceEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcC
Confidence 79999765 5559999999999987 899999999999999999999876666666655443
No 32
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.84 E-value=7.3e-09 Score=87.66 Aligned_cols=62 Identities=18% Similarity=0.296 Sum_probs=53.9
Q ss_pred cCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 027870 113 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 113 ~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~ 181 (217)
+....+|.|+.+++.||++|++.|.++++ ...+++||++++|+|++|.+.+.++ .+.+-++.
T Consensus 47 G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~-----~~~l~~Gd~~~~p~~~~H~~~a~~~--~~~l~i~~ 108 (227)
T 3rns_A 47 DEEITAEAMLGNRYYYCFNGNGEIFIENN-----KKTISNGDFLEITANHNYSIEARDN--LKLIEIGE 108 (227)
T ss_dssp TCEEEECSCSSCEEEEEEESEEEEEESSC-----EEEEETTEEEEECSSCCEEEEESSS--EEEEEEEE
T ss_pred CCccCccccCCCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEECCC--cEEEEEEe
Confidence 45789999999999999999999999988 8999999999999999999998775 44444433
No 33
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=98.83 E-value=7.5e-09 Score=80.15 Aligned_cols=64 Identities=20% Similarity=0.337 Sum_probs=49.1
Q ss_pred cccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEE
Q 027870 116 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 188 (217)
Q Consensus 116 ~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~ 188 (217)
+.+|. ..+|+.||++|++.+.++++ .+.+++||.|.||+|+.|++.+.+ ...+ .||.-.|.|..
T Consensus 53 ~~~H~-~~~E~~~Vl~G~~~~~~~g~-----~~~l~~GD~v~ip~g~~H~~~~~~-~~~~--~l~v~~P~w~~ 116 (119)
T 3lwc_A 53 LTETM-AVDDVMIVLEGRLSVSTDGE-----TVTAGPGEIVYMPKGETVTIRSHE-EGAL--TAYVTYPHWRP 116 (119)
T ss_dssp EEEEC-SSEEEEEEEEEEEEEEETTE-----EEEECTTCEEEECTTCEEEEEEEE-EEEE--EEEEEECC---
T ss_pred cCccC-CCCEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCEEEEEcCC-CCeE--EEEEECCCCcc
Confidence 45665 78999999999999999876 899999999999999999998764 3344 44444455864
No 34
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=98.83 E-value=1e-08 Score=79.64 Aligned_cols=59 Identities=27% Similarity=0.378 Sum_probs=51.4
Q ss_pred cccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 116 YTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 116 ~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
...|.|+ .+|+.||++|++.+.++++ .+.+++||++++|+|+.|++.+.++..+..+-+
T Consensus 70 ~~~H~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v 129 (133)
T 1o4t_A 70 VGLHKHEGEFEIYYILLGEGVFHDNGK-----DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAV 129 (133)
T ss_dssp EEEEECCSEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred cCceECCCccEEEEEEeCEEEEEECCE-----EEEeCCCcEEEECCCCcEEeEECCCCCEEEEEE
Confidence 4689998 6999999999999999987 899999999999999999999877666655544
No 35
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=98.83 E-value=1.3e-08 Score=87.55 Aligned_cols=67 Identities=22% Similarity=0.326 Sum_probs=57.6
Q ss_pred cCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 027870 113 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 184 (217)
Q Consensus 113 ~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~ 184 (217)
+..+++|.|+.+|++|||+|++.|.+++. + ...+++||.|.+|+|+.|+.++ .+.++.++-+..+.|
T Consensus 142 G~~yP~HsHp~EEiy~VLsG~~e~~v~~g--~--~~~l~pGd~v~ipsgv~Ha~rt-~dePllalwvW~G~~ 208 (217)
T 4b29_A 142 GLDYGWHEHLPEELYSVVSGRALFHLRNA--P--DLMLEPGQTRFHPANAPHAMTT-LTDPILTLVLWRGAG 208 (217)
T ss_dssp SCEEEEEECSSEEEEEEEEECEEEEETTS--C--CEEECTTCEEEECTTCCEEEEC-CSSCEEEEEEEESTT
T ss_pred CCcCCCCCCCCceEEEEEeCCEEEEECCC--C--EEecCCCCEEEcCCCCceeEEE-CCccEEEEEEEeCCC
Confidence 45699999999999999999999999832 2 5789999999999999999996 457788888777765
No 36
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=98.82 E-value=1.4e-08 Score=82.85 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=51.2
Q ss_pred cccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC-CCCcEEEEEEE
Q 027870 118 EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD-TSNYVKLMRLF 180 (217)
Q Consensus 118 eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~-~~~~~~aiRlF 180 (217)
.|.|+.+|+.||++|++.+.+++. +..-.+.+++||.+.+|+|++|++.+. ++...+.+-++
T Consensus 135 ~h~h~~~E~~~Vl~G~~~~~~~~~-~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 135 NSGHAGNEFLFVLEGEIHMKWGDK-ENPKEALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp CCCCSSCEEEEEEESCEEEEESCT-TSCEEEEECTTCEEEECTTCCEEEEESTTSCCEEEEEEE
T ss_pred cccCCCeEEEEEEeeeEEEEECCc-CCcccEEECCCCEEEeCCCCceEEEecCCCCCeEEEEEe
Confidence 699999999999999999999871 111189999999999999999999987 66666665543
No 37
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.79 E-value=8.7e-09 Score=87.89 Aligned_cols=63 Identities=19% Similarity=0.191 Sum_probs=57.8
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
....|+|+.+|+.||++|++.+.++++ .+.+++||.|.+|+|+.|++.+..+...+.+-+|..
T Consensus 158 ~~~~H~H~~~e~~~Vl~G~~~~~i~~~-----~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p 220 (243)
T 3h7j_A 158 EMPFHKHRNEQIGICIGGGYDMTVEGC-----TVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFP 220 (243)
T ss_dssp EEEEECCSSEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEES
T ss_pred cCCCEeCCCcEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcC
Confidence 456899999999999999999999987 789999999999999999999988888888888874
No 38
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=98.79 E-value=1.5e-08 Score=82.51 Aligned_cols=58 Identities=17% Similarity=0.106 Sum_probs=50.4
Q ss_pred cccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 027870 118 EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 118 eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~ 181 (217)
.|.|..+|+.||++|++.+.++++ .+.+++||.|++|+|+.|++.+.++... .+-++.
T Consensus 121 ~H~h~~~E~~~Vl~G~~~~~~~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~ 178 (192)
T 1y9q_A 121 PHALGVIEYIHVLEGIMKVFFDEQ-----WHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVA 178 (192)
T ss_dssp CCSTTCEEEEEEEESCEEEEETTE-----EEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEE
T ss_pred CCCCCCEEEEEEEEeEEEEEECCE-----EEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEe
Confidence 688888999999999999999887 8999999999999999999998766655 554443
No 39
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.77 E-value=2.2e-08 Score=75.68 Aligned_cols=49 Identities=24% Similarity=0.369 Sum_probs=43.8
Q ss_pred ccccCCCceEEEEEeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 117 TEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 117 ~eH~H~~dEiryileG~g~f~v~-~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
..| |+.+|+.||++|++.+.++ ++ .+.+++||.|++|+|+.|++.+.+.
T Consensus 44 ~~h-H~~~E~~~Vl~G~~~~~i~~g~-----~~~l~~GD~i~ip~g~~H~~~n~~~ 93 (101)
T 1o5u_A 44 DWY-YDTNETCYILEGKVEVTTEDGK-----KYVIEKGDLVTFPKGLRCRWKVLEP 93 (101)
T ss_dssp EEE-CSSCEEEEEEEEEEEEEETTCC-----EEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ccc-CCceEEEEEEeCEEEEEECCCC-----EEEECCCCEEEECCCCcEEEEeCCC
Confidence 356 8899999999999999998 66 8999999999999999999987543
No 40
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.75 E-value=4.1e-08 Score=87.30 Aligned_cols=69 Identities=20% Similarity=0.238 Sum_probs=57.2
Q ss_pred ccccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 115 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
....|+|. .+|++||++|++.+.+.+.+++-..+.+++||+++||+|+.|++.+.++..+..+-+|...
T Consensus 64 ~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~ 133 (361)
T 2vqa_A 64 IRELHWHANAAEWAYVMEGRTRITLTSPEGKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDG 133 (361)
T ss_dssp EEEEEECTTCCEEEEEEESEEEEEEECTTSCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESST
T ss_pred CCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCC
Confidence 45689999 8999999999999999655543335899999999999999999999876677777666543
No 41
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.74 E-value=3.4e-08 Score=85.71 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=52.0
Q ss_pred ccc-ccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC-CcEEEEEE
Q 027870 116 YTE-HIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS-NYVKLMRL 179 (217)
Q Consensus 116 ~~e-H~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~-~~~~aiRl 179 (217)
... |.|..+|+.||++|++.+.++++ .+.+++||+|.||+|+.|++.+.++ ..++.+-+
T Consensus 195 ~~~~H~H~~~E~~yVl~G~~~~~i~~~-----~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~ 255 (274)
T 1sef_A 195 HAYIETHVQEHGAYLISGQGMYNLDNE-----WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYS 255 (274)
T ss_dssp CSSCBCCSCCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEECSSSCEEEEEE
T ss_pred cCcceeccCeEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEE
Confidence 455 99999999999999999999887 7999999999999999999998776 66666554
No 42
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.74 E-value=4.1e-08 Score=81.86 Aligned_cols=57 Identities=25% Similarity=0.338 Sum_probs=49.3
Q ss_pred cCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 113 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 113 ~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
+..+.+|.|+.+|++|+++|+..+.+++. ++.-.+.+++||+++||+|++|+-.+.+
T Consensus 45 n~r~d~H~h~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 45 NHRTDYHDDPLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp BCCCCEEECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred CcCccCcCCCCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 34689999999999999999999999963 4445799999999999999999986654
No 43
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=98.73 E-value=4.5e-08 Score=80.33 Aligned_cols=75 Identities=16% Similarity=0.247 Sum_probs=57.4
Q ss_pred eeeeeeCccCccChHHHhcCccccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCC-
Q 027870 95 MDLLDLCPEKVTNYEEKLKNFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSN- 172 (217)
Q Consensus 95 ~Dvi~i~p~~~p~y~~k~~~f~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~- 172 (217)
.-.+++.|.. ....| |. .+|+.||++|++.+.+.+.++.. ...+++||++++|+|+.|++.+.++.
T Consensus 43 ~~~~~l~pg~----------~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~~~-~~~l~~GDv~~~P~g~~H~~~N~g~~~ 110 (178)
T 1dgw_A 43 VLEYCSKPNT----------LLLPH-HSDSDLLVLVLEGQAILVLVNPDGRD-TYKLDQGDAIKIQAGTPFYLINPDNNQ 110 (178)
T ss_dssp EEEEEECTTE----------EEEEE-EESSEEEEEEEESEEEEEEEETTEEE-EEEEETTEEEEECTTCCEEEEECCSSS
T ss_pred EEEEEecCCc----------EecCc-CCCCCEEEEEEeEEEEEEEEeCCCcE-EEEECCCCEEEECCCCeEEEEeCCCCC
Confidence 3455666653 35789 65 69999999999999997443222 67999999999999999999987654
Q ss_pred cEEEEEEEc
Q 027870 173 YVKLMRLFV 181 (217)
Q Consensus 173 ~~~aiRlF~ 181 (217)
.+..+-++.
T Consensus 111 ~l~~l~v~~ 119 (178)
T 1dgw_A 111 NLRILKFAI 119 (178)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEC
Confidence 677666654
No 44
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.73 E-value=2.2e-08 Score=82.25 Aligned_cols=59 Identities=15% Similarity=0.220 Sum_probs=50.3
Q ss_pred ccccccCC-CceEEEEEe--ceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHA-DEEIRYCLE--GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~-~dEiryile--G~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
....|+|. .+|++||++ |+|.|.++++ .+.+++||+|+||+|+.|++. + .++.|-++..
T Consensus 57 ~~~~H~H~~~~E~~yVLe~~G~g~v~idge-----~~~l~~GD~v~IPpg~~H~i~-g---~l~~L~I~~P 118 (157)
T 4h7l_A 57 AARTHYHREHQEIYVVLDHAAHATIELNGQ-----SYPLTKLLAISIPPLVRHRIV-G---EATIINIVSP 118 (157)
T ss_dssp CCCCBBCSSCEEEEEEEEECTTCEEEETTE-----EEECCTTEEEEECTTCCEEEE-S---CEEEEEEEES
T ss_pred CccceECCCCcEEEEEEecCcEEEEEECCE-----EEEeCCCCEEEECCCCeEeeE-C---CEEEEEEECC
Confidence 35789997 579999999 9999999987 899999999999999999997 2 4666666653
No 45
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.72 E-value=2.2e-08 Score=84.71 Aligned_cols=60 Identities=23% Similarity=0.413 Sum_probs=51.0
Q ss_pred CccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 114 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
....+|+|+.+|+.||++|++.+.++++ .+.+++||.+++|+|+.|++.++ ...++++-.
T Consensus 164 ~~~~~H~H~~~e~~~Vl~G~~~~~i~g~-----~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~ 223 (227)
T 3rns_A 164 ESLDPHKAPGDALVTVLDGEGKYYVDGK-----PFIVKKGESAVLPANIPHAVEAE-TENFKMLLI 223 (227)
T ss_dssp CEEEEECCSSEEEEEEEEEEEEEEETTE-----EEEEETTEEEEECTTSCEEEECC-SSCEEEEEE
T ss_pred CccCCEECCCcEEEEEEeEEEEEEECCE-----EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEE
Confidence 4567999999999999999999999987 89999999999999999999983 233554433
No 46
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=98.69 E-value=7.7e-08 Score=85.55 Aligned_cols=68 Identities=19% Similarity=0.300 Sum_probs=58.2
Q ss_pred ccccccCCC-ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
....|+|.. +|+.||++|++.+.+.+.+++...+.+++||++++|+|+.|++.+.++..++.+-++..
T Consensus 246 ~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~ 314 (361)
T 2vqa_A 246 MRQLHWHPNADEWQYVLDGEMDLTVFASEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFND 314 (361)
T ss_dssp EEEEEECSSCCEEEEEEESCEEEEEECSTTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESS
T ss_pred ccccccCCCCCEEEEEEeCEEEEEEEcCCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECC
Confidence 456799987 99999999999999965555555789999999999999999999877777888888765
No 47
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.68 E-value=4.4e-08 Score=88.14 Aligned_cols=67 Identities=22% Similarity=0.305 Sum_probs=56.6
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
....|+|+.+|++||++|++.+.+.+.+++.+...+++||+++||+|+.|++.+.++ .+..+-+|..
T Consensus 91 ~~~~H~H~~~E~~~Vl~G~~~~~~~~~~g~~~~~~l~~GD~~~ip~g~~H~~~n~~~-~~~~~~v~~~ 157 (385)
T 1j58_A 91 IRELHWHKEAEWAYMIYGSARVTIVDEKGRSFIDDVGEGDLWYFPSGLPHSIQALEE-GAEFLLVFDD 157 (385)
T ss_dssp EEEEEEESSCEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEEEEE-EEEEEEEESC
T ss_pred CCCCccCChheEEEEEeeeEEEEEEeCCCcEEEEEeCCCCEEEECCCCeEEEEECCC-CEEEEEEECC
Confidence 467899999999999999999999877777766799999999999999999988653 3555665654
No 48
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.67 E-value=6.7e-08 Score=75.05 Aligned_cols=49 Identities=14% Similarity=0.313 Sum_probs=46.0
Q ss_pred ccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 117 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 117 ~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
..|.|+..|+.||++|+|.+.++++ .+.+++||+++||+|+.|.+...+
T Consensus 32 ~p~~h~~~~i~~v~~G~~~~~i~~~-----~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 32 RPLGMKGYILNLTIRGQGVVKNQGR-----EFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp ETTCCSSEEEEEEEEECEEEEETTE-----EEEECTTCEEEECTTCCEEEEECT
T ss_pred cccCCCceEEEEEEEeEEEEEECCE-----EEEecCCeEEEEcCCCCEEEEeCC
Confidence 4789999999999999999999988 899999999999999999998865
No 49
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.66 E-value=1.9e-07 Score=88.16 Aligned_cols=75 Identities=13% Similarity=0.266 Sum_probs=62.2
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE-cCCCceEE
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF-VGEPVWTA 188 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~d-~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF-~~~~gW~~ 188 (217)
+.....|+|+ .+|+.||++|++.+.+.+.++ +++...+++||+++||+|..|+..++ +..+..+-|+ ...|+-+.
T Consensus 348 Ga~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng-~~~l~~l~f~~s~~p~~~~ 425 (476)
T 1fxz_A 348 NAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQ-SDNFEYVSFKTNDTPMIGT 425 (476)
T ss_dssp TCEEEEEEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-STTEEEEEEESSSSCCEEE
T ss_pred CceecceECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeC-CCCEEEEEEECCCCCceeE
Confidence 3568899998 689999999999999987654 57778899999999999999999994 6678888888 44565443
No 50
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.66 E-value=6.7e-08 Score=84.41 Aligned_cols=62 Identities=31% Similarity=0.577 Sum_probs=54.5
Q ss_pred ccccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
....|+|. .+|+.||++|++.+.++++ .+.+++||.++||+|+.|++.+..+ ..+.+-+|..
T Consensus 230 ~~~~h~H~~~~e~~~vl~G~~~~~i~~~-----~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 230 RIVDHYHEYHTETFYCLEGQMTMWTDGQ-----EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp CCCCEECSSCEEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred CCCCcCCCCCcEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 45679998 6999999999999999877 8999999999999999999999876 6777777654
No 51
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=98.64 E-value=8.4e-08 Score=83.81 Aligned_cols=62 Identities=23% Similarity=0.403 Sum_probs=53.2
Q ss_pred ccccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
....|.|. .+|++||++|++.+.++++ .+.+++||+|.+|+|+.|.+.+.++ ..+.+-++..
T Consensus 58 ~~~~h~H~~~~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~~~p 120 (337)
T 1y3t_A 58 AFPLHVHKDTHEGILVLDGKLELTLDGE-----RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSYTMK 120 (337)
T ss_dssp EEEEEECTTCCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECST-TEEEEEEEET
T ss_pred CCCceeCCCceEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCC-CeEEEEEECC
Confidence 45689999 8999999999999999877 8999999999999999999998766 4666655544
No 52
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.64 E-value=7.4e-08 Score=78.42 Aligned_cols=61 Identities=20% Similarity=0.481 Sum_probs=47.0
Q ss_pred cCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEE
Q 027870 120 IHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 188 (217)
Q Consensus 120 ~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~ 188 (217)
.|+.+|+.|||+|++.+.++++ .+.+++||.++||+|+.|+|.+. ...+.+-+.. +++|..
T Consensus 81 ~~~~eE~~yVLeG~~~l~i~g~-----~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~~-P~~~~~ 141 (151)
T 4axo_A 81 TLNYDEIDYVIDGTLDIIIDGR-----KVSASSGELIFIPKGSKIQFSVP--DYARFIYVTY-PADWAS 141 (151)
T ss_dssp ECSSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEEE-CSCC--
T ss_pred eCCCcEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEEC-CCCccc
Confidence 3568999999999999999877 89999999999999999999986 2344443332 344544
No 53
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=98.64 E-value=5.4e-08 Score=82.94 Aligned_cols=60 Identities=20% Similarity=0.192 Sum_probs=52.2
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEE-EeCCCCeeeeeeCCCCcEEEEEE
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLI-VLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlI-iIPaG~~H~F~~~~~~~~~aiRl 179 (217)
...+|+|+.+|+.||++|++.+.++++ ...+++||.| +||+|+.|++.+.++.....+-+
T Consensus 46 ~~~~H~H~~~e~~~Vl~G~~~~~~~~~-----~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 46 NVEPHQHKEVQIGMVVSGELMMTVGDV-----TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEEECCSSEEEEEEEESEEEEEETTE-----EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred ccCCEECCCcEEEEEEEeEEEEEECCE-----EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 467999999999999999999999877 8999999999 59999999999877666555544
No 54
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.64 E-value=9.7e-08 Score=82.06 Aligned_cols=60 Identities=18% Similarity=0.108 Sum_probs=49.5
Q ss_pred ccccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC-CcEEEEEE
Q 027870 115 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS-NYVKLMRL 179 (217)
Q Consensus 115 f~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~-~~~~aiRl 179 (217)
....|.|. .+|+.||++|++.+.++++ .+.+++||.|.+|+|+.|++.+.++ ..++.+-+
T Consensus 191 ~~~~h~H~~~~E~~~Vl~G~~~~~i~~~-----~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~ 252 (261)
T 1rc6_A 191 SHGYIETHVQEHGAYILSGQGVYNLDNN-----WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYS 252 (261)
T ss_dssp CBEEEEEESSCEEEEEEESEEEEESSSC-----EEEEETTCEEEECSSEEEEEEEC----CEEEEEE
T ss_pred ccCcccCCCceEEEEEEEeEEEEEECCE-----EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEE
Confidence 35678885 7899999999999999987 8999999999999999999999776 66665543
No 55
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.63 E-value=1.6e-07 Score=84.43 Aligned_cols=68 Identities=18% Similarity=0.240 Sum_probs=56.3
Q ss_pred ccccccCCC-ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
....|+|+. +|+.||++|++.+.+.+.+++--.+.+++||.+++|+|+.|++.+.++..+..+-++..
T Consensus 269 ~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~ 337 (385)
T 1j58_A 269 MRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKD 337 (385)
T ss_dssp EEEEEECSSSCEEEEEEESEEEEEEEEETTEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESS
T ss_pred ccCceeCCCCCEEEEEEeCeEEEEEEcCCCcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECC
Confidence 356799998 99999999999999983332212788999999999999999999887777888877764
No 56
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.62 E-value=4.2e-08 Score=88.84 Aligned_cols=62 Identities=26% Similarity=0.404 Sum_probs=53.7
Q ss_pred CccccccCCCceEEEEEeceEEE-EEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE
Q 027870 114 NFYTEHIHADEEIRYCLEGSGYF-DVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF 180 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g~f-~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF 180 (217)
.....|.|..+|++||++|+|.| .++++ ++.+++||+|+||+|+.|++.+.++..+..+.+.
T Consensus 111 ~~~~~H~H~~~e~~yVl~G~g~~t~v~g~-----~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 111 EVAPSHRHNQSALRFIVEGKGAFTAVDGE-----RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp CEEEEEEESSCEEEEEEECSSCEEEETTE-----EEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred CCcCCeecCcceEEEEEEEEEEEEEECCE-----EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 34668999999999999999999 88876 8999999999999999999998777666666553
No 57
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=98.62 E-value=1.2e-07 Score=88.85 Aligned_cols=79 Identities=13% Similarity=0.158 Sum_probs=64.1
Q ss_pred eeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC-CC
Q 027870 94 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SN 172 (217)
Q Consensus 94 ~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~-~~ 172 (217)
..-.+++.|.. ....|.|..+|+.||++|+|.+.+-+.++. ....+++||++++|+|+.||+.+.+ +.
T Consensus 87 s~~~~~l~Pgg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~ 155 (445)
T 2cav_A 87 RVLEYCSKPNT----------LLLPHHSDSDLLVLVLEGQAILVLVNPDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQ 155 (445)
T ss_dssp EEEEEEECSSE----------EEEEEEESSEEEEEEEESEEEEEEEETTEE-EEEEEETTEEEEECTTCCEEEEECCSSC
T ss_pred EEEEEEECCCc----------CccCcCCCCceEEEEEeCEEEEEEEeCCCC-EEEEecCCCEEEECCCCcEEEEECCCCC
Confidence 34456777764 567896678999999999999998654433 5788999999999999999999986 77
Q ss_pred cEEEEEEEcCC
Q 027870 173 YVKLMRLFVGE 183 (217)
Q Consensus 173 ~~~aiRlF~~~ 183 (217)
.++++.+|...
T Consensus 156 ~l~~l~v~~~~ 166 (445)
T 2cav_A 156 NLRILKFAITF 166 (445)
T ss_dssp CEEEEEEEECC
T ss_pred CEEEEEEeccC
Confidence 89999888743
No 58
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.61 E-value=2.5e-07 Score=88.17 Aligned_cols=76 Identities=16% Similarity=0.254 Sum_probs=62.6
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE-cCCCceEEe
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF-VGEPVWTAY 189 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~d-~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF-~~~~gW~~~ 189 (217)
+.....|+|+ .+|+.||++|++.+.+.+.++ +.+...+++||+++||+|+.|+..+ .+..+..+-|+ ...++-+.+
T Consensus 382 G~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~L 460 (510)
T 3c3v_A 382 NALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANL 460 (510)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEES
T ss_pred CceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeec
Confidence 4568899998 689999999999999987654 6777789999999999999999999 46678888888 345665443
No 59
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.60 E-value=6.5e-08 Score=88.88 Aligned_cols=60 Identities=25% Similarity=0.481 Sum_probs=53.4
Q ss_pred CccccccCCCceEEEEEeceE-EEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEE
Q 027870 114 NFYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMR 178 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g-~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiR 178 (217)
.....|.|..+|++||++|+| ++.++++ ++.+++||+|+||+|..|.+.++++..+..+-
T Consensus 114 ~~~~~HrH~~~ev~~VleG~G~~~~vdG~-----~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 114 ETAPEHRHSQNAFRFVVEGEGVWTVVNGD-----PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp CEEEEEEESSCEEEECSSCEEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CccCceecccceEEEEEecceEEEEECCE-----EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 447789999999999999999 6888887 99999999999999999999998877777653
No 60
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=98.59 E-value=1.6e-07 Score=77.93 Aligned_cols=74 Identities=18% Similarity=0.323 Sum_probs=60.9
Q ss_pred eeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 027870 95 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 95 ~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~-~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~ 173 (217)
.-++++.|.. ....|.|..+|..||++|++.+.++ ++ .+.+++||.| +|+|+.|++.+..+..
T Consensus 81 ~~~v~l~PG~----------~~~~H~H~~eE~~~VLeGel~l~ld~ge-----~~~L~~GDsi-~~~g~~H~~~N~g~~~ 144 (172)
T 3es1_A 81 IRVVDMLPGK----------ESPMHRTNSIDYGIVLEGEIELELDDGA-----KRTVRQGGII-VQRGTNHLWRNTTDKP 144 (172)
T ss_dssp EEEEEECTTC----------BCCCBCCSEEEEEEEEESCEEEECGGGC-----EEEECTTCEE-EECSCCBEEECCSSSC
T ss_pred EEEEEECCCC----------CCCCeecCceEEEEEEeCEEEEEECCCe-----EEEECCCCEE-EeCCCcEEEEeCCCCC
Confidence 3455666653 2467999988999999999999998 56 7899999999 9999999999987778
Q ss_pred EEEEEEEcCCC
Q 027870 174 VKLMRLFVGEP 184 (217)
Q Consensus 174 ~~aiRlF~~~~ 184 (217)
.+++-++....
T Consensus 145 ar~l~V~~P~~ 155 (172)
T 3es1_A 145 CRIAFILIEAP 155 (172)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEcCCC
Confidence 88887776654
No 61
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.58 E-value=2.5e-07 Score=87.75 Aligned_cols=76 Identities=14% Similarity=0.211 Sum_probs=62.2
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCC-CcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc-CCCceEEe
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV-GEPVWTAY 189 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~-d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~-~~~gW~~~ 189 (217)
+..+..|+|+ .+|+.||++|++.+.+.+.+ .+++...+++||+++||+|..|+..+++ ..+..|-+|+ ..|+-..+
T Consensus 377 G~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~vvP~G~~H~~~n~~-e~~~~l~~~ts~~p~~~~l 455 (493)
T 2d5f_A 377 NGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLVVPQNFVVAEQGGE-QGLEYVVFKTHHNAVSSYI 455 (493)
T ss_dssp TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEESSTTCCEEEH
T ss_pred CceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEEECCCCeEeeeeCC-CCEEEEEEECCCCCcceeH
Confidence 3458899998 68999999999999999765 4566788999999999999999988754 5688888884 45665554
No 62
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=98.57 E-value=3.9e-07 Score=75.23 Aligned_cols=56 Identities=11% Similarity=0.010 Sum_probs=49.6
Q ss_pred ccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEE
Q 027870 117 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLM 177 (217)
Q Consensus 117 ~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~ai 177 (217)
..+.|..+|++|||+|++.+.+++. .+.+++||.+.||+|..|+|.+..+...+.+
T Consensus 104 ~~~~h~gEE~~yVLeG~v~vtl~g~-----~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll 159 (166)
T 2vpv_A 104 LSNSFRTYITFHVIQGIVEVTVCKN-----KFLSVKGSTFQIPAFNEYAIANRGNDEAKMF 159 (166)
T ss_dssp EEECCSEEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred CccCCCceEEEEEEEeEEEEEECCE-----EEEEcCCCEEEECCCCCEEEEECCCCCEEEE
Confidence 3477889999999999999999988 8999999999999999999999877665443
No 63
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.56 E-value=2.4e-07 Score=86.41 Aligned_cols=77 Identities=13% Similarity=0.216 Sum_probs=61.8
Q ss_pred eeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC-CC
Q 027870 94 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SN 172 (217)
Q Consensus 94 ~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~-~~ 172 (217)
..-.++|.|.. ....|.|..+|++||++|+|.+.+-+. +.-....+++||+++||+|+.||+.+.+ +.
T Consensus 62 s~~~~~l~PGg----------~~~pHh~~a~Ei~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e 130 (434)
T 2ea7_A 62 RVVEFKSKPNT----------LLLPHHADADFLLVVLNGTAVLTLVNP-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNE 130 (434)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESEEEEEEECS-SCEEEEEEETTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEecCCc----------CccCccCCCceEEEEEecEEEEEEEeC-CCCEEEEeCCCCEEEECCCccEEEEeCCCCC
Confidence 34456777654 578894568999999999999998743 3445789999999999999999999876 67
Q ss_pred cEEEEEEEc
Q 027870 173 YVKLMRLFV 181 (217)
Q Consensus 173 ~~~aiRlF~ 181 (217)
.+.++-+|.
T Consensus 131 ~l~~l~~~~ 139 (434)
T 2ea7_A 131 NLRIIKLAI 139 (434)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEec
Confidence 888888764
No 64
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.55 E-value=2.7e-07 Score=81.33 Aligned_cols=68 Identities=19% Similarity=0.369 Sum_probs=56.4
Q ss_pred eeeeeeCccCccChHHHhcCccc-cccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 027870 95 MDLLDLCPEKVTNYEEKLKNFYT-EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 95 ~Dvi~i~p~~~p~y~~k~~~f~~-eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~ 173 (217)
..++++.|.. ... .|+|..++..|||+|+|.+.+++. .+.|++||+|.+|+|..|++.+.++..
T Consensus 188 ~~~~t~~PG~----------~~p~~e~H~~eh~~~vL~G~g~y~l~~~-----~~~V~~GD~i~~~~~~~h~~~n~G~e~ 252 (266)
T 4e2q_A 188 IHTMDFQPGE----------FLNVKEVHYNQHGLLLLEGQGIYRLGDN-----WYPVQAGDVIWMAPFVPQWYAALGKTR 252 (266)
T ss_dssp EEEEEECTTC----------BCSSCCCCSCCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSC
T ss_pred EEEEEECCCc----------CcCCceEcccceEEEEEeceEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCCCC
Confidence 4566666653 233 588999999999999999999877 788999999999999999999987777
Q ss_pred EEEE
Q 027870 174 VKLM 177 (217)
Q Consensus 174 ~~ai 177 (217)
++-|
T Consensus 253 ~~yl 256 (266)
T 4e2q_A 253 SRYL 256 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7644
No 65
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.55 E-value=2.5e-07 Score=85.81 Aligned_cols=77 Identities=16% Similarity=0.234 Sum_probs=62.2
Q ss_pred eeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC-CCC
Q 027870 94 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD-TSN 172 (217)
Q Consensus 94 ~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~-~~~ 172 (217)
..-.++|.|.. ....|.|..+|++||++|+|.+.+-+. +.-....+++||+++||+|+.||+.+. ++.
T Consensus 50 s~~~~~l~PGg----------~~~pHh~~a~E~~yVl~G~g~v~~v~~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e 118 (416)
T 1uij_A 50 RIVQFQSKPNT----------ILLPHHADADFLLFVLSGRAILTLVNN-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQ 118 (416)
T ss_dssp EEEEEEECTTE----------EEEEEEESEEEEEEEEESCEEEEEECS-SCEEEEEECTTEEEEECTTCEEEEEECCSSC
T ss_pred EEEEEEeccCc----------CcccccCCCceEEEEEeeEEEEEEEEC-CCCeEEEecCCCEEEECCCCeEEEEecCCCC
Confidence 34556777753 578895568999999999999998543 334478999999999999999999998 478
Q ss_pred cEEEEEEEc
Q 027870 173 YVKLMRLFV 181 (217)
Q Consensus 173 ~~~aiRlF~ 181 (217)
.+.+|.++.
T Consensus 119 ~l~~l~~~~ 127 (416)
T 1uij_A 119 NLKMIWLAI 127 (416)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEec
Confidence 888888875
No 66
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=98.54 E-value=2.1e-07 Score=87.86 Aligned_cols=81 Identities=16% Similarity=0.175 Sum_probs=66.1
Q ss_pred CCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCc----------------------EEEE
Q 027870 91 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ----------------------WIRI 148 (217)
Q Consensus 91 Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~----------------------wi~i 148 (217)
|+... .++|.|.. +...|+|+..|+.||++|+|.+.+-..+.. ....
T Consensus 47 gvs~~-r~~l~Pgg----------l~~Ph~~~a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~d~~qk~~ 115 (476)
T 1fxz_A 47 GVALS-RCTLNRNA----------LRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIY 115 (476)
T ss_dssp TCEEE-EEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC------------------CCCCEE
T ss_pred ceEEE-EEEEcCCC----------EecceecCCceEEEEEecEEEEEEEcCCCcchhhccccccccccccccccccceEE
Confidence 76444 35677653 678999999999999999999999864322 1246
Q ss_pred EEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 149 WIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 149 ~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
.+++||+|.||+|+.||+.++++..+.++-+|..
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~ 149 (476)
T 1fxz_A 116 NFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDT 149 (476)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEECT
T ss_pred EEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 7999999999999999999999889999999873
No 67
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.53 E-value=2.2e-07 Score=83.81 Aligned_cols=63 Identities=22% Similarity=0.361 Sum_probs=51.5
Q ss_pred cccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 027870 118 EHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 118 eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~ 181 (217)
.|.|. .+|++||++|++.+.+++.++..-.+.+++||.|++|+|+.|+|.+..+.. +++-++.
T Consensus 65 ~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~ 128 (350)
T 1juh_A 65 PHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIV 128 (350)
T ss_dssp CEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEE
T ss_pred cccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEc
Confidence 79998 899999999999999998323222789999999999999999999876554 5555544
No 68
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=98.53 E-value=9.8e-08 Score=82.62 Aligned_cols=65 Identities=20% Similarity=0.154 Sum_probs=53.3
Q ss_pred cccccCC-CceEEEEEeceEEEEE--------ecC-------CCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEE-EE
Q 027870 116 YTEHIHA-DEEIRYCLEGSGYFDV--------RDE-------SDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKL-MR 178 (217)
Q Consensus 116 ~~eH~H~-~dEiryileG~g~f~v--------~~~-------~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~a-iR 178 (217)
...|+|. .+|++||++|++.+.+ ++. +++...+.+++||++++|+|+.|.|.+.++...++ +-
T Consensus 56 ~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~ 135 (239)
T 2xlg_A 56 PMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFV 135 (239)
T ss_dssp CCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEE
T ss_pred CCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 5789998 7999999999999999 543 12345789999999999999999999877766666 55
Q ss_pred EE
Q 027870 179 LF 180 (217)
Q Consensus 179 lF 180 (217)
++
T Consensus 136 ~~ 137 (239)
T 2xlg_A 136 WM 137 (239)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 69
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.52 E-value=2.1e-07 Score=86.09 Aligned_cols=61 Identities=21% Similarity=0.282 Sum_probs=52.6
Q ss_pred CccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC-CCcEEEEEE
Q 027870 114 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT-SNYVKLMRL 179 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~-~~~~~aiRl 179 (217)
.-...|.|..++++||++|+|++.|+++ ++.+++||+|+||+|..|.+.+.+ +..+..+.+
T Consensus 305 ~~~~~HrH~~~~v~~VleG~G~~~V~ge-----~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i 366 (394)
T 3bu7_A 305 EHTKAHRHTGNVIYNVAKGQGYSIVGGK-----RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSF 366 (394)
T ss_dssp CBCCCEEESSCEEEEEEECCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEE
T ss_pred CcCCCcccCCcEEEEEEeCeEEEEECCE-----EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEe
Confidence 4467899999999999999999999887 999999999999999999999865 455555544
No 70
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.51 E-value=4.3e-07 Score=77.79 Aligned_cols=55 Identities=24% Similarity=0.333 Sum_probs=48.5
Q ss_pred cccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEE
Q 027870 118 EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLM 177 (217)
Q Consensus 118 eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~ai 177 (217)
.|.|..+|..|||+|++.+.++++ .+.+++||.|.++++.+|+|.+..+..++.|
T Consensus 181 ~~~h~~ee~~~vLeG~~~~~~~~~-----~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 181 AEVHYMEHGLLMLEGEGLYKLEEN-----YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp CBCCSSCEEEEEEECEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccCCCceEEEEEEECEEEEEECCE-----EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 367889999999999999999877 7899999999999999999999777666443
No 71
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.51 E-value=2.4e-07 Score=81.17 Aligned_cols=58 Identities=14% Similarity=0.241 Sum_probs=50.5
Q ss_pred ccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 117 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 117 ~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
..|.|..+|+.||++|++.+.++++ .+.+++||.|.+|+|+.|++.+.++...+.+-+
T Consensus 84 ~~h~H~~eE~~~Vl~G~l~v~v~g~-----~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v 141 (278)
T 1sq4_A 84 PEQDPNAEAVLFVVEGELSLTLQGQ-----VHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWI 141 (278)
T ss_dssp CCCCTTEEEEEEEEESCEEEEESSC-----EEEECTTEEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CCcCCCceEEEEEEeCEEEEEECCE-----EEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 4578999999999999999999988 899999999999999999999876665554443
No 72
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.51 E-value=4.4e-07 Score=75.75 Aligned_cols=59 Identities=29% Similarity=0.346 Sum_probs=50.1
Q ss_pred CccccccCCCceEEEEEeceEEEEEecCC---CcEEEEEEeCCCEEEeCCCCeeeeeeCCCC
Q 027870 114 NFYTEHIHADEEIRYCLEGSGYFDVRDES---DQWIRIWIKAGDLIVLPAGIYHRFTLDTSN 172 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g~f~v~~~~---d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~ 172 (217)
..+.+|.|+.+|++|+++|+....+.+.+ .+...+.+++||+++||+|++|+-...++.
T Consensus 45 ~r~D~H~~~~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~~e~ 106 (176)
T 1zvf_A 45 ERTDYHINPTPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRFADT 106 (176)
T ss_dssp CCSCEEECSSCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEECTTC
T ss_pred cCCcCcCCCCceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCcccCCc
Confidence 46889988999999999999999999732 146689999999999999999998665543
No 73
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.51 E-value=2.4e-07 Score=74.80 Aligned_cols=90 Identities=11% Similarity=0.121 Sum_probs=62.0
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCCC---cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEE
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD---QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTA 188 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~d---~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~ 188 (217)
...-..|.|. .||++++++|+..+.+++.++ +--.+.+++|++++||+|+.|+..+.++..+.. +.... +.
T Consensus 39 ~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~e~~vLL---iEp~n--TG 113 (140)
T 3d0j_A 39 EGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQKDTKMMY---VQDSN--CS 113 (140)
T ss_dssp TTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECTTCEEEE---EEESC--CC
T ss_pred ccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCCceEEEE---EEeCC--CC
Confidence 3456689997 699999999999999995311 012689999999999999999999987654332 22220 11
Q ss_pred eCCC--CCCcHHHHHHHHhhc
Q 027870 189 YNRP--QEDHPARKEYIKGLT 207 (217)
Q Consensus 189 ~~r~--~d~~~~R~~y~~~~~ 207 (217)
...+ ......+.++++.+.
T Consensus 114 d~~se~t~~~~~~i~~i~~~~ 134 (140)
T 3d0j_A 114 MDNSDFCDLSKEEIEYIQTNA 134 (140)
T ss_dssp GGGEEEEECCHHHHHHHHHHH
T ss_pred CCCCccccCCHHHHHHHHHHH
Confidence 0011 135677888887754
No 74
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.50 E-value=2.6e-07 Score=86.97 Aligned_cols=82 Identities=16% Similarity=0.199 Sum_probs=64.9
Q ss_pred CCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCc-E--------------------EEEE
Q 027870 91 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ-W--------------------IRIW 149 (217)
Q Consensus 91 Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~-w--------------------i~i~ 149 (217)
|.... .++|.|.. +...|+|+..|+.||++|+|.+.+-..+.. - ....
T Consensus 62 gvs~~-r~~i~pgg----------l~~Ph~h~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~q~~~~ 130 (459)
T 2e9q_A 62 GVNMI-RHTIRPKG----------LLLPGFSNAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQHQKIRP 130 (459)
T ss_dssp TEEEE-EEEECTTE----------EEEEEEESSCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEECCCEE
T ss_pred ceEEE-EEEEcCCC----------EecceecCCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccccccccceeEE
Confidence 55333 36777654 678999999999999999999998643321 1 1357
Q ss_pred EeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 150 IKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 150 v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
+++||+|+||+|+.||..++++..+.++-+|...
T Consensus 131 l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~ 164 (459)
T 2e9q_A 131 FREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTR 164 (459)
T ss_dssp EETTEEEEECTTCCEEEEECSSSCEEEEEEEESS
T ss_pred ecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCC
Confidence 9999999999999999999988899999888743
No 75
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.50 E-value=3.8e-07 Score=84.38 Aligned_cols=60 Identities=23% Similarity=0.458 Sum_probs=52.8
Q ss_pred CccccccCCCceEEEEEeceEEE-EEecCCCcEEEEEEeCCCEEEeCCCCeeeeee-CCCCcEEEEE
Q 027870 114 NFYTEHIHADEEIRYCLEGSGYF-DVRDESDQWIRIWIKAGDLIVLPAGIYHRFTL-DTSNYVKLMR 178 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g~f-~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~-~~~~~~~aiR 178 (217)
.-...|.|..+|++||++|+|.| .++++ ++.+++||+|++|+|..|...+ .++..+..+-
T Consensus 134 ~~~~~HrH~~~ev~~IleG~G~~t~v~G~-----~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~ 195 (394)
T 3bu7_A 134 ERAGAHRHAASALRFIMEGSGAYTIVDGH-----KVELGANDFVLTPNGTWHEHGILESGTECIWQD 195 (394)
T ss_dssp CBCCCEEESSCEEEEEEECSCEEEEETTE-----EEEECTTCEEEECTTCCEEEEECTTCCCEEEEE
T ss_pred CCcCCccCCcceEEEEEEeeEEEEEECCE-----EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEE
Confidence 44788999988999999999976 88777 8999999999999999999999 7777777664
No 76
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=98.50 E-value=4.1e-07 Score=86.28 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=65.1
Q ss_pred cCCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCC------------------C--------
Q 027870 90 RGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDES------------------D-------- 143 (217)
Q Consensus 90 ~Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~------------------d-------- 143 (217)
.|+ ..-.++|.|.. +...|+|+..++.||++|+|.+.+-..+ .
T Consensus 43 ~gv-~~~r~~i~pgg----------l~~Ph~~~~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~~~d~~ 111 (493)
T 2d5f_A 43 AGV-TVSKRTLNRNG----------LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSH 111 (493)
T ss_dssp HTC-EEEEEEECTTE----------EEEEEECSSCEEEEEEECEEEEEECCTTCCCCEEECC-------------CSEEE
T ss_pred CCE-EEEEEEeCCCc----------EeCceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 365 44457777764 5789999999999999999999988322 0
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 144 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 144 ~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
.. ...+++||+|+||||+.||+.++++..+.++-+|..
T Consensus 112 qk-v~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~ 149 (493)
T 2d5f_A 112 QK-IRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDT 149 (493)
T ss_dssp SC-EEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECT
T ss_pred ce-EEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecC
Confidence 11 238999999999999999999998889999988874
No 77
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.49 E-value=1.7e-07 Score=73.23 Aligned_cols=50 Identities=22% Similarity=0.289 Sum_probs=43.0
Q ss_pred ccccCCCceEEEEEeceEEEEE-ecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 117 TEHIHADEEIRYCLEGSGYFDV-RDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 117 ~eH~H~~dEiryileG~g~f~v-~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
..|.|..+|+.|||+|++.+.+ +++ .+.+++||.+++|+|..|++.+.+.
T Consensus 62 ~~~~~~~~E~~~Vl~G~~~l~~~~g~-----~~~l~~GD~~~ip~g~~h~~~~~~~ 112 (123)
T 3bcw_A 62 QSNTTGYIEYCHIIEGEARLVDPDGT-----VHAVKAGDAFIMPEGYTGRWEVDRH 112 (123)
T ss_dssp ECCCTTEEEEEEEEEEEEEEECTTCC-----EEEEETTCEEEECTTCCCEEEEEEE
T ss_pred eeEcCCCcEEEEEEEEEEEEEECCCe-----EEEECCCCEEEECCCCeEEEEECCc
Confidence 3566666999999999999999 444 7899999999999999999998653
No 78
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=98.48 E-value=2e-07 Score=73.50 Aligned_cols=52 Identities=29% Similarity=0.396 Sum_probs=43.9
Q ss_pred CCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE
Q 027870 122 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF 180 (217)
Q Consensus 122 ~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF 180 (217)
..+|+.|||+|++.+.++++ .+.+++||.|++|+|+.|++...+ .++.+-++
T Consensus 74 ~~~E~~~VLeG~~~l~~~g~-----~~~l~~GD~i~~p~g~~h~~~~~~--~~~~l~v~ 125 (133)
T 2pyt_A 74 NYDEIDMVLEGELHVRHEGE-----TMIAKAGDVMFIPKGSSIEFGTPT--SVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCEEEEEEEE--EEEEEEEE
T ss_pred CCCEEEEEEECEEEEEECCE-----EEEECCCcEEEECCCCEEEEEeCC--CEEEEEEE
Confidence 58999999999999999877 889999999999999999998643 34444444
No 79
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.47 E-value=4.8e-07 Score=81.52 Aligned_cols=62 Identities=13% Similarity=0.188 Sum_probs=52.3
Q ss_pred CccccccCCCceEEEEEeceEEEEEec-CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 027870 114 NFYTEHIHADEEIRYCLEGSGYFDVRD-ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g~f~v~~-~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~ 181 (217)
.....|+|+.+++.||++|++.+.+++ + ++.+++||.|+||||++|.+.+.+. +.+.+-+-.
T Consensus 263 ~~~~~h~~~~~~~~~vleG~~~i~i~g~~-----~~~l~~Gd~~~iPag~~h~~~~~~~-~~~~l~~~~ 325 (350)
T 1juh_A 263 VTVPTWSFPGACAFQVQEGRVVVQIGDYA-----ATELGSGDVAFIPGGVEFKYYSEAY-FSKVLFVSS 325 (350)
T ss_dssp SCCCCBCCSSCEEEEEEESCEEEEETTSC-----CEEECTTCEEEECTTCCEEEEESSS-SEEEEEEEE
T ss_pred CCCCcccCCCcEEEEEEeeEEEEEECCeE-----EEEeCCCCEEEECCCCCEEEEecCC-eEEEEEEec
Confidence 356789999999999999999999998 6 7999999999999999999998754 344444443
No 80
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.47 E-value=4.6e-07 Score=85.52 Aligned_cols=82 Identities=17% Similarity=0.242 Sum_probs=65.9
Q ss_pred CCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCC-CcEE-----------------------
Q 027870 91 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDES-DQWI----------------------- 146 (217)
Q Consensus 91 Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~-d~wi----------------------- 146 (217)
|+.... ++|.|.. +...|+|...|+.||++|+|.+.+-..+ .+-+
T Consensus 49 gvs~~R-~~i~P~g----------l~~Ph~h~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~~~~~~~~~~~ 117 (465)
T 3qac_A 49 GVSVIR-RTIEPHG----------LLLPSFTSAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDERIREQGSRKF 117 (465)
T ss_dssp TCEEEE-EEECTTE----------EEEEEEESSCEEEEEEECEEEEEEECTTCCCCC-----------------------
T ss_pred ceEEEE-EEEcCCc----------CcccEEcCCCEEEEEEECcEEEEEecCCCCceeecchhcccccccccccccccccc
Confidence 776554 5566654 6889999999999999999999976332 1111
Q ss_pred -------------EEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 147 -------------RIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 147 -------------~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
...+++||+|.||+|+.||+.++++..+.++-+|...
T Consensus 118 ~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~ 167 (465)
T 3qac_A 118 GMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTA 167 (465)
T ss_dssp -------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTT
T ss_pred ccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCC
Confidence 3579999999999999999999999999999998764
No 81
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=98.45 E-value=5.1e-07 Score=86.05 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=66.6
Q ss_pred cCCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCc-------------------------
Q 027870 90 RGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQ------------------------- 144 (217)
Q Consensus 90 ~Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~------------------------- 144 (217)
.|+.. -.++|.|.. +...|+|...|++||++|+|.+.+-..+..
T Consensus 46 ~gvs~-~r~~i~p~g----------l~lPh~~~a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~~~~~~~ 114 (510)
T 3c3v_A 46 AGVAL-SRLVLRRNA----------LRRPFYSNAPQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPPRRLQEE 114 (510)
T ss_dssp HTCEE-EEEEECTTE----------EEEEEECSSCEEEEEEECCEEEEEECTTCCCCEEEECCC----------------
T ss_pred CcEEE-EEEEECCCC----------CccceecCCCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccccccccc
Confidence 37654 446777654 678999999999999999999999864320
Q ss_pred ----------EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 145 ----------WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 145 ----------wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
.....+++||+|.||||+.||+.++++..+.+|-+|...
T Consensus 115 ~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~ 163 (510)
T 3c3v_A 115 DQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTN 163 (510)
T ss_dssp ----CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTT
T ss_pred ccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCC
Confidence 012579999999999999999999998899999988654
No 82
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.43 E-value=7.3e-07 Score=82.49 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=64.3
Q ss_pred eeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCE------EEeCCCCeeeeee
Q 027870 95 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDL------IVLPAGIYHRFTL 168 (217)
Q Consensus 95 ~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDl------IiIPaG~~H~F~~ 168 (217)
.-.+++.|.. +...|+|..+|+.||++|+|.+.+-+.+++. ...+++||+ +.||+|+.||..+
T Consensus 54 ~~~~~l~pgg----------~~~ph~~~a~ei~yVl~G~~~v~~v~~~~~~-~~~l~~GDv~~~~~~~~iP~G~~h~~~N 122 (397)
T 2phl_A 54 LVEFRSKPET----------LLLPQQADAELLLVVRSGSAILVLVKPDDRR-EYFFLTSDNPIFSDHQKIPAGTIFYLVN 122 (397)
T ss_dssp EEEEEECSSE----------EEEEEEESEEEEEEEEESEEEEEEEETTTEE-EEEEEESSCTTSCSEEEECTTCEEEEEE
T ss_pred EEEEEECCCc----------CccCEecCCCeEEEEEeeeEEEEEEeCCCcE-EEEECCCCcccccceEEECCCCcEEEEe
Confidence 4456677654 5678999989999999999999998665553 789999999 9999999999987
Q ss_pred CC-CCcEEEEEEEcC
Q 027870 169 DT-SNYVKLMRLFVG 182 (217)
Q Consensus 169 ~~-~~~~~aiRlF~~ 182 (217)
.+ +..+.++.+|..
T Consensus 123 ~g~~~~l~~i~~~~~ 137 (397)
T 2phl_A 123 PDPKEDLRIIQLAMP 137 (397)
T ss_dssp CCSSCCEEEEEEEEE
T ss_pred CCCCCCeEEEEeecC
Confidence 66 678999988863
No 83
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=98.41 E-value=1.4e-06 Score=83.29 Aligned_cols=76 Identities=12% Similarity=0.231 Sum_probs=60.5
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc-CCCceEEe
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV-GEPVWTAY 189 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~d-~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~-~~~gW~~~ 189 (217)
+.....|+|+ ..|+.||++|++.+.+-+.++ +.+...+++||+++||+|+.|...++ ++.+..+-|.+ ..|+...+
T Consensus 404 Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G~~v~~~~L~~GDV~v~P~G~~H~~~ag-~e~l~flaF~ss~np~~~~L 482 (531)
T 3fz3_A 404 NGIYSPHWNVNAHSVVYVIRGNARVQVVNENGDAILDQEVQQGQLFIVPQNHGVIQQAG-NQGFEYFAFKTEENAFINTL 482 (531)
T ss_dssp TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEE-EEEEEEEEEESSTTCCEEES
T ss_pred CccccceEcCCCCEEEEEEeCcEEEEEEeCCCcEEEEEEecCCeEEEECCCCeEEEecC-CCCEEEEEEecCCCCcceec
Confidence 4568899998 489999999999999987754 57899999999999999999976655 45566665544 45665544
No 84
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.33 E-value=1.7e-06 Score=82.23 Aligned_cols=83 Identities=18% Similarity=0.202 Sum_probs=63.9
Q ss_pred cCCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCC-CcEE--------------------EE
Q 027870 90 RGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDES-DQWI--------------------RI 148 (217)
Q Consensus 90 ~Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~-d~wi--------------------~i 148 (217)
.|.... .++|.|.. +...|+|...||.||++|+|++.+-..+ .+-+ ..
T Consensus 44 ~gvs~~-R~~i~pgg----------l~lPh~~~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~~~d~~qk~~ 112 (496)
T 3ksc_A 44 AGVALS-RATLQRNA----------LRRPYYSNAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRRYRDRHQKVN 112 (496)
T ss_dssp HTCEEE-EEEECTTE----------EEEEEEESSCEEEEEEECCEEEEEECTTCCCC---------------CCCCCCEE
T ss_pred CCceEE-EEEecCCC----------EeCceEcCCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccccccchheee
Confidence 465433 35556543 6789999889999999999999995432 1211 23
Q ss_pred EEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 149 WIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 149 ~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
.+++||+|+||+|+.||..++++..+.++-+|...
T Consensus 113 ~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~ 147 (496)
T 3ksc_A 113 RFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIR 147 (496)
T ss_dssp EECTTEEEEECTTCEEEEEECSSSCEEEEEEECTT
T ss_pred ccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccC
Confidence 89999999999999999999988899999888653
No 85
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.33 E-value=1.2e-06 Score=76.62 Aligned_cols=56 Identities=20% Similarity=0.255 Sum_probs=48.7
Q ss_pred cccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEE
Q 027870 118 EHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMR 178 (217)
Q Consensus 118 eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiR 178 (217)
.|.|..+|.+|||+|+|.+.++++ .+.+++||+|.+++|..|+|.+.++..++.|-
T Consensus 207 ~~~h~~e~~~~il~G~~~~~~~~~-----~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~ 262 (278)
T 1sq4_A 207 AETHVMEHGLYVLEGKAVYRLNQD-----WVEVEAGDFMWLRAFCPQACYSGGPGRFRYLL 262 (278)
T ss_dssp CCCCSEEEEEEEEECEEEEEETTE-----EEEEETTCEEEEEESCCEEEECCSSSCEEEEE
T ss_pred CCCCCccEEEEEEeCEEEEEECCE-----EEEeCCCCEEEECCCCCEEEEcCCCCCEEEEE
Confidence 466888999999999999999877 79999999999999999999997766655443
No 86
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=98.29 E-value=8.7e-07 Score=80.21 Aligned_cols=50 Identities=24% Similarity=0.228 Sum_probs=45.9
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
.-..|.|...|++||++|+|.+.|+++ ++.+++||+++||+|..|.+.++
T Consensus 280 ~~~~H~h~~~ev~~v~~G~g~~~v~~~-----~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 280 ASRVARTTDSTIYHVVEGSGQVIIGNE-----TFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp BCCCBEESSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCCEEEEEE
T ss_pred CCCceecCCcEEEEEEeCeEEEEECCE-----EEEEcCCCEEEECCCCeEEEEeC
Confidence 356799998899999999999999876 89999999999999999999885
No 87
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=98.29 E-value=3e-06 Score=79.69 Aligned_cols=70 Identities=10% Similarity=0.188 Sum_probs=58.5
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~d-~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
+.....|+|+ ..|+.||++|+|.+.+-+.++ +.+.-.+++||+++||+|..|+..+++ ..+..+-+|...
T Consensus 332 G~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~~~~~~l~~GDv~v~P~G~~H~~~ng~-~~~~~l~~~~s~ 403 (459)
T 2e9q_A 332 NAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQSVFDGEVREGQVLMIPQNFVVIKRASD-RGFEWIAFKTND 403 (459)
T ss_dssp TCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEEE-EEEEEEEEESSS
T ss_pred CcCccceECCCCCEEEEEEeeEEEEEEEeCCCCEEEeeEEeCCcEEEECCCCEEEEEeCC-CCeEEEEEecCC
Confidence 4668899998 579999999999999997654 566677999999999999999988854 558888888543
No 88
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=98.28 E-value=3.8e-06 Score=77.70 Aligned_cols=69 Identities=14% Similarity=0.177 Sum_probs=59.2
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecC------CC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDE------SD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~------~d-~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
+.....|+|+ ..|+.||++|+|.+.+-+. ++ +.+...+++||+++||+|..|+-.+.+ .+..+-|+...
T Consensus 249 G~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s 325 (397)
T 2phl_A 249 GALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINA 325 (397)
T ss_dssp TEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESC
T ss_pred CcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCC
Confidence 3568899998 6899999999999999976 44 788999999999999999999998885 47777776664
No 89
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=98.28 E-value=3.7e-06 Score=77.89 Aligned_cols=68 Identities=15% Similarity=0.206 Sum_probs=57.1
Q ss_pred CccccccCC-CceEEEEEeceEEEEEecCCC--------------cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEE
Q 027870 114 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD--------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMR 178 (217)
Q Consensus 114 ~f~~eH~H~-~dEiryileG~g~f~v~~~~d--------------~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiR 178 (217)
.....|+|+ ..|+.||++|+|.+.+-+.++ +.+.-.+++||+++||+|..|+..+. ..+..+-
T Consensus 260 ~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~ 337 (416)
T 1uij_A 260 ALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLA 337 (416)
T ss_dssp EEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEE
T ss_pred cEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEE
Confidence 458899998 689999999999999997655 36666999999999999999999888 3578888
Q ss_pred EEcCC
Q 027870 179 LFVGE 183 (217)
Q Consensus 179 lF~~~ 183 (217)
||...
T Consensus 338 f~~~~ 342 (416)
T 1uij_A 338 FGINA 342 (416)
T ss_dssp EEETC
T ss_pred EEcCC
Confidence 88654
No 90
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=98.26 E-value=7.9e-07 Score=66.35 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=50.9
Q ss_pred ccccccCCC-ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
-..+|.|.. .|++++++|++.+...+ +..-.+.+++||.+.||+|+.|+..+.++.++..|.+
T Consensus 29 ~~~~H~H~~~~e~~~v~~G~~~v~~~d--~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 29 ATGHHTHGMDYVVVPMADGEMTIVAPD--GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp ECCSEECCSCEEEEESSCBC-CEECTT--SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred ccCcEECCCcEEEEEEeccEEEEEeCC--CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 467899985 68888899999987764 3333567899999999999999999998888888766
No 91
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.24 E-value=5.9e-07 Score=71.51 Aligned_cols=79 Identities=13% Similarity=0.044 Sum_probs=56.9
Q ss_pred eeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcE
Q 027870 95 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYV 174 (217)
Q Consensus 95 ~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~ 174 (217)
.-++.+.|.. .+..|.|...|..|||+|+..+..++..+ ...+++||++.+|+|..|.+....+. .
T Consensus 46 ~~~~~~~pG~----------~~p~H~H~~~ee~~VL~G~~~~~~g~~~~---~~~~~~Gd~~~~p~g~~H~p~~~~e~-~ 111 (145)
T 2o1q_A 46 TAIFDCPAGS----------SFAAHVHVGPGEYFLTKGKMDVRGGKAAG---GDTAIAPGYGYESANARHDKTEFPVA-S 111 (145)
T ss_dssp EEEEEECTTE----------EECCEEESSCEEEEEEEEEEEETTCGGGT---SEEEESSEEEEECTTCEESCCEEEEE-E
T ss_pred EEEEEECCCC----------CCCccCCCCCEEEEEEEeEEEEcCCCEec---ceEeCCCEEEEECcCCccCCeECCCC-e
Confidence 4567777653 57899999888899999999976654411 27899999999999999995433333 4
Q ss_pred EEEEEEcCCCceE
Q 027870 175 KLMRLFVGEPVWT 187 (217)
Q Consensus 175 ~aiRlF~~~~gW~ 187 (217)
.++.+|.++-.|+
T Consensus 112 ~~l~~~~gp~~f~ 124 (145)
T 2o1q_A 112 EFYMSFLGPLTFV 124 (145)
T ss_dssp EEEEEEESCEEEE
T ss_pred EEEEEECCcceec
Confidence 5566676654343
No 92
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=98.23 E-value=2.7e-06 Score=72.94 Aligned_cols=53 Identities=13% Similarity=0.220 Sum_probs=46.4
Q ss_pred CCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 122 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 122 ~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
..+|+.||++|++.+.++++ .+.+++||.+.+|+|+.|++.+..+...+.+-+
T Consensus 80 ~~ee~~~Vl~G~l~~~~~~~-----~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v 132 (261)
T 1rc6_A 80 GIETFLYVISGNITAKAEGK-----TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 132 (261)
T ss_dssp TEEEEEEEEESEEEEEETTE-----EEEEETTEEEEECTTCCCEEEECSSSCEEEEEE
T ss_pred CceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 46899999999999999987 899999999999999999999977666555544
No 93
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=98.23 E-value=9.9e-06 Score=76.99 Aligned_cols=75 Identities=13% Similarity=0.169 Sum_probs=61.2
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCC-CcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC-CCceEE
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG-EPVWTA 188 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~-d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~-~~gW~~ 188 (217)
+.....|+|+ ..|+.||++|++.+.+-+.+ .+.+.-.+++||+++||+|..|.-.++ +..+..+-||.. .|+-+.
T Consensus 368 Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~ 445 (496)
T 3ksc_A 368 NAMFVPHYNLNANSIIYALKGRARLQVVNCNGNTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIAR 445 (496)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEE
T ss_pred CeEECCeeCCCCCEEEEEEeceEEEEEEeCCCcEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCcccc
Confidence 5678999997 57999999999999999765 457788899999999999999976666 456888888854 455443
No 94
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.17 E-value=4.3e-06 Score=72.39 Aligned_cols=54 Identities=9% Similarity=0.103 Sum_probs=46.5
Q ss_pred CCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 121 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 121 H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
|..+|+.||++|++.+.++++ .+.+++||.+.+|+|++|++.+..+...+.+-+
T Consensus 82 ~~~ee~~~Vl~G~l~~~~~~~-----~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v 135 (274)
T 1sef_A 82 DGIQTLVYVIDGRLRVSDGQE-----THELEAGGYAYFTPEMKMYLANAQEADTEVFLY 135 (274)
T ss_dssp TTEEEEEEEEESEEEEECSSC-----EEEEETTEEEEECTTSCCEEEESSSSCEEEEEE
T ss_pred CCceEEEEEEEeEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEE
Confidence 346899999999999999988 899999999999999999999977666554433
No 95
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.16 E-value=6.4e-06 Score=73.29 Aligned_cols=59 Identities=24% Similarity=0.273 Sum_probs=50.1
Q ss_pred ccccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEE
Q 027870 115 FYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVK 175 (217)
Q Consensus 115 f~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~ 175 (217)
.+.+| |+ .+|++|+++|.....+++ +++.-.|.+++||+++||+|++|+-...++....
T Consensus 43 R~d~H-~~~~dE~FyqlkG~m~l~~~d-~g~~~~V~i~eGemfllP~gv~HsP~r~~et~gL 102 (286)
T 2qnk_A 43 RKDYH-IEEGEEVFYQLEGDMVLRVLE-QGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGL 102 (286)
T ss_dssp CCCEE-ECSSCEEEEEEESCEEEEEEE-TTEEEEEEECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred CccCc-CCCCCeEEEEEeCeEEEEEEe-CCceeeEEECCCeEEEeCCCCCcCCcccCCeEEE
Confidence 47899 75 799999999999999996 3556679999999999999999999886655433
No 96
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=98.15 E-value=7.3e-06 Score=77.34 Aligned_cols=74 Identities=12% Similarity=0.205 Sum_probs=60.8
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCCC-cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC-CceE
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE-PVWT 187 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~d-~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~-~gW~ 187 (217)
+.....|+|+ ..|+.||++|++.+.+-+.++ +.+.-.+++||+++||+|..|.-.++ +..+..+-+|... |+-+
T Consensus 333 Ggm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~~f~~~l~~GDV~v~P~G~~H~~~ag-~e~~~~l~~f~s~np~~~ 409 (466)
T 3kgl_A 333 NAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDRVFDGQVSQGQLLSIPQGFSVVKRAT-SEQFRWIEFKTNANAQIN 409 (466)
T ss_dssp TEEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSSSCCEE
T ss_pred CcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcEEEEeEecCCcEEEECCCCeEEEEcC-CCCEEEEEEECCCCCccc
Confidence 3568899997 579999999999999998754 57888999999999999999987655 4558888888764 5433
No 97
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=98.13 E-value=7.6e-06 Score=76.29 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=56.5
Q ss_pred CccccccCC-CceEEEEEeceEEEEEecCCC-------------cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 114 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 114 ~f~~eH~H~-~dEiryileG~g~f~v~~~~d-------------~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
.....|+|+ ..|+.||++|+|.+.+-+.++ +.+.-.+++||+++||+|..|+..+.+ .+..+-|
T Consensus 277 ~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~~--~~~~v~f 354 (434)
T 2ea7_A 277 ALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINATS--NLNFFAF 354 (434)
T ss_dssp EEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEE
T ss_pred eeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcCC--CeEEEEE
Confidence 457899998 689999999999999987643 256668999999999999999998883 4777777
Q ss_pred EcCC
Q 027870 180 FVGE 183 (217)
Q Consensus 180 F~~~ 183 (217)
+...
T Consensus 355 ~~~~ 358 (434)
T 2ea7_A 355 GINA 358 (434)
T ss_dssp EETC
T ss_pred ECCC
Confidence 7654
No 98
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=98.12 E-value=1.2e-05 Score=75.92 Aligned_cols=91 Identities=12% Similarity=0.223 Sum_probs=69.2
Q ss_pred eeeeeCccCccChHHH----------hcCccccccCC-CceEEEEEeceEEEEEecCC-CcEEEEEEeCCCEEEeCCCCe
Q 027870 96 DLLDLCPEKVTNYEEK----------LKNFYTEHIHA-DEEIRYCLEGSGYFDVRDES-DQWIRIWIKAGDLIVLPAGIY 163 (217)
Q Consensus 96 Dvi~i~p~~~p~y~~k----------~~~f~~eH~H~-~dEiryileG~g~f~v~~~~-d~wi~i~v~~GDlIiIPaG~~ 163 (217)
.+..++...+|..... .+.....|+|+ ..|+.||++|+|.+.+-+.+ .+.+.-.+++||+++||+|..
T Consensus 306 ~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~~~f~~~l~~GDVfvvP~g~~ 385 (465)
T 3qac_A 306 RLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQSVFDEELSRGQLVVVPQNFA 385 (465)
T ss_dssp EEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEEECTTCE
T ss_pred eEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCcEEEEEEecCCeEEEECCCcE
Confidence 3445555556655432 24568899998 57999999999999999775 458888899999999999999
Q ss_pred eeeeeCCCCcEEEEEEEcC-CCceE
Q 027870 164 HRFTLDTSNYVKLMRLFVG-EPVWT 187 (217)
Q Consensus 164 H~F~~~~~~~~~aiRlF~~-~~gW~ 187 (217)
|.-.++ +..+..+-||+. .|+-+
T Consensus 386 h~~~ag-~e~~~~l~f~~s~np~~~ 409 (465)
T 3qac_A 386 IVKQAF-EDGFEWVSFKTSENAMFQ 409 (465)
T ss_dssp EEEEEE-EEEEEEEEEESSTTCCEE
T ss_pred EEEEcC-CCCeEEEEEecCCCCccc
Confidence 987765 445888888854 35533
No 99
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=98.10 E-value=1e-05 Score=75.22 Aligned_cols=68 Identities=15% Similarity=0.280 Sum_probs=54.9
Q ss_pred CccccccCC-CceEEEEEeceEEEEEecCCC-------------------------cEEEEEEeCCCEEEeCCCCeeeee
Q 027870 114 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESD-------------------------QWIRIWIKAGDLIVLPAGIYHRFT 167 (217)
Q Consensus 114 ~f~~eH~H~-~dEiryileG~g~f~v~~~~d-------------------------~wi~i~v~~GDlIiIPaG~~H~F~ 167 (217)
..+..|+|+ ..|+.||++|+|.+.+-+.++ +.+.-.+++||+++||+|.+||..
T Consensus 274 g~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~ 353 (418)
T 3s7i_A 274 ALMLPHFNSKAMVIVVVNKGTGNLELVAVRKEQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAIN 353 (418)
T ss_dssp EEEEEEEESSCEEEEEEEECCEEEEEEEEEEC-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEE
T ss_pred ceeCceecCCCCEEEEEEeCeEEEEEEeCCCccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEE
Confidence 457899996 689999999999998875432 467889999999999999999988
Q ss_pred eCCCCcEEEEEEEcCC
Q 027870 168 LDTSNYVKLMRLFVGE 183 (217)
Q Consensus 168 ~~~~~~~~aiRlF~~~ 183 (217)
+++ + +..+-|+...
T Consensus 354 ~~~-~-l~~v~f~~~~ 367 (418)
T 3s7i_A 354 ASS-E-LHLLGFGINA 367 (418)
T ss_dssp ESS-C-EEEEEEEESC
T ss_pred CCC-C-EEEEEEEcCC
Confidence 765 3 6666665443
No 100
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=98.09 E-value=6.2e-06 Score=61.75 Aligned_cols=62 Identities=13% Similarity=0.155 Sum_probs=47.0
Q ss_pred cccccCCCc-eEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 116 YTEHIHADE-EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 116 ~~eH~H~~d-EiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
..+|.|..+ ++.++++|++.+..+ ++++..+.+++||.+.+|+|+.|++.+.++..+..|-+
T Consensus 30 ~~~H~H~~~~~iv~v~~G~~~~~~~--dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 30 TGHHTHGMDYVVVPMADGEMTIVAP--DGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCSEECCSCEEEEESSCBC-CEECT--TSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cCcEeCCCCEEEEEEeeEEEEEEeC--CCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 579999854 555667888777664 34333578999999999999999999988777776655
No 101
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.05 E-value=6.5e-06 Score=75.57 Aligned_cols=52 Identities=17% Similarity=0.267 Sum_probs=48.0
Q ss_pred ccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 115 FYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
--..|.|...+|++|++|+|...|+++ ++.+++||+++||++..|++.++++
T Consensus 291 ~t~~hRht~s~Vy~V~eG~G~~~I~~~-----~~~w~~gD~fvvP~w~~h~~~n~~~ 342 (368)
T 3nw4_A 291 ETATRNEVGSTVFQVFEGAGAVVMNGE-----TTKLEKGDMFVVPSWVPWSLQAETQ 342 (368)
T ss_dssp BCCCEEESSCEEEEEEESCEEEEETTE-----EEEECTTCEEEECTTCCEEEEESSS
T ss_pred ccCCeeccccEEEEEEeCcEEEEECCE-----EEEecCCCEEEECCCCcEEEEeCCC
Confidence 357899999999999999999999988 9999999999999999999988753
No 102
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.04 E-value=5.9e-06 Score=72.75 Aligned_cols=78 Identities=14% Similarity=0.086 Sum_probs=58.7
Q ss_pred eeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 027870 95 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 95 ~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~-~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~ 173 (217)
.=++++.|.. . ...|.|..+|+.||++|++.+.++ ++ ...+++||.+.+|+|..|++.+.+.-.
T Consensus 72 ~~lv~l~PGg--------~--s~~~~h~~EEfiyVleG~l~l~l~~g~-----~~~L~~Gds~y~p~~~~H~~~N~~~Ar 136 (266)
T 4e2q_A 72 MYLAKMKEMS--------S--SGLPPQDIERLIFVVEGAVTLTNTSSS-----SKKLTVDSYAYLPPNFHHSLDCVESAT 136 (266)
T ss_dssp EEEEEECSSE--------E--CCCCCTTEEEEEEEEEECEEEEC--CC-----CEEECTTEEEEECTTCCCEEEESSCEE
T ss_pred EEEEEECcCC--------c--CCCCCCCCeEEEEEEEEEEEEEECCCc-----EEEEcCCCEEEECCCCCEEEEeCCCEE
Confidence 4467777763 1 245788899999999999999998 77 799999999999999999999865433
Q ss_pred EEEE-EEEcCCCceE
Q 027870 174 VKLM-RLFVGEPVWT 187 (217)
Q Consensus 174 ~~ai-RlF~~~~gW~ 187 (217)
+..+ +-|..-+|..
T Consensus 137 ~l~V~k~y~~~~g~~ 151 (266)
T 4e2q_A 137 LVVFERRYEYLGSHT 151 (266)
T ss_dssp EEEEEEECCCCTTCC
T ss_pred EEEEEeEeeeCCCCC
Confidence 3333 3366556633
No 103
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=97.96 E-value=3.8e-05 Score=71.87 Aligned_cols=69 Identities=16% Similarity=0.250 Sum_probs=56.6
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecCCC---------c--EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEE
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDESD---------Q--WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLF 180 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~~d---------~--wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF 180 (217)
+.....|+|+ ..|+.||++|+|++.+-+.++ + .+...+++||+++||+|..|+-.+.+ .+..+-|+
T Consensus 291 g~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~~--~~~~v~f~ 368 (445)
T 2cav_A 291 GALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIG 368 (445)
T ss_dssp TEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CCEEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEE
T ss_pred CceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcCC--CeEEEEEE
Confidence 3568899997 699999999999999997653 3 68899999999999999999988883 36666776
Q ss_pred cCC
Q 027870 181 VGE 183 (217)
Q Consensus 181 ~~~ 183 (217)
...
T Consensus 369 ~~~ 371 (445)
T 2cav_A 369 VNA 371 (445)
T ss_dssp ESC
T ss_pred ccC
Confidence 444
No 104
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=97.94 E-value=2.2e-05 Score=74.13 Aligned_cols=80 Identities=16% Similarity=0.293 Sum_probs=62.5
Q ss_pred CCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCC--C-------------------------
Q 027870 91 GYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDES--D------------------------- 143 (217)
Q Consensus 91 Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~--d------------------------- 143 (217)
||... .+++.|. .+...|+|+..|+.||++|+|++.+-..+ .
T Consensus 42 gvs~~-r~~i~p~----------Gl~lPh~~~a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~~~~~~ 110 (466)
T 3kgl_A 42 GVSFV-RYIIESK----------GLYLPSFFSTAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQGQGQQ 110 (466)
T ss_dssp TEEEE-EEEECTT----------EEEEEEEESSCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC-------------
T ss_pred CeEEE-EEEECCC----------CEeCCeeCCCCeEEEEEeCeEEEEEecCCCcchhhcccccccccccccccccccccc
Confidence 76543 3555554 37889999999999999999998876331 0
Q ss_pred ---------------------------------cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 144 ---------------------------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 144 ---------------------------------~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
+-| ..+++||+|.||||+.||..++++..+.++-++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv-~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~ 181 (466)
T 3kgl_A 111 GQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKV-EHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDL 181 (466)
T ss_dssp ----------------------------CCEEESCE-EEEETTEEEEECTTCEEEEECCSSSCEEEEEEEES
T ss_pred ccccccccccccccccccccccccccccccccceee-ccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcC
Confidence 011 37899999999999999999988888998888754
No 105
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.93 E-value=1.4e-05 Score=67.69 Aligned_cols=54 Identities=15% Similarity=0.189 Sum_probs=45.7
Q ss_pred cCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 027870 113 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 113 ~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
...+..|.|++-|+.||++|+|. .+++.... .+.+.+||+++||+|..|.+...
T Consensus 19 ~~~~~~~~~~~~~i~~v~~G~~~-~i~~~~~~--~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 19 TYIFNNLYINDYKMFWIDSGIAK-LIDKNCLV--SYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEEEEEEECSSCEEEEESSSCEE-EEETTTTE--EEEECTTEEEEECTTCEEEEEEE
T ss_pred chhccHhhhcceEEEEEecCceE-EECCccce--eEEEcCCCEEEEcCCCceeeccc
Confidence 34578999999999999999999 99854111 37899999999999999999876
No 106
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=97.91 E-value=3.6e-05 Score=71.59 Aligned_cols=70 Identities=14% Similarity=0.269 Sum_probs=53.0
Q ss_pred CccccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC-CCCcEEEEE--EEcCCCc
Q 027870 114 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD-TSNYVKLMR--LFVGEPV 185 (217)
Q Consensus 114 ~f~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~-~~~~~~aiR--lF~~~~g 185 (217)
.++..| |. .+||.||++|+|...+-+.++ .....+++||+++||+|+.||..+. ++..+..+- +....||
T Consensus 55 gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~-~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg 128 (418)
T 3s7i_A 55 TLVLPK-HADADNILVIQQGQATVTVANGNN-RKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPG 128 (418)
T ss_dssp EEEEEE-EESEEEEEEEEESEEEEEEECSSC-EEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTT
T ss_pred ceeeee-eCCCCeEEEEEEeeEEEEEEecCC-EEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCC
Confidence 367788 64 699999999999999976544 4468999999999999999998884 444555543 3333454
No 107
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=97.88 E-value=3e-05 Score=66.27 Aligned_cols=42 Identities=26% Similarity=0.332 Sum_probs=40.2
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
.+|+.||++|++.+.++++ .+.+++||.+.+|+|+.|++.+.
T Consensus 68 ~ee~~~Vl~G~~~~~~~~~-----~~~l~~Gd~~~~p~~~~H~~~n~ 109 (246)
T 1sfn_A 68 YQRFAFVLSGEVDVAVGGE-----TRTLREYDYVYLPAGEKHMLTAK 109 (246)
T ss_dssp SEEEEEEEEEEEEEECSSC-----EEEECTTEEEEECTTCCCEEEEE
T ss_pred eeEEEEEEECEEEEEECCE-----EEEECCCCEEEECCCCCEEEEeC
Confidence 7899999999999999988 89999999999999999999987
No 108
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=97.88 E-value=2.4e-05 Score=65.20 Aligned_cols=57 Identities=19% Similarity=0.172 Sum_probs=45.0
Q ss_pred cCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEE
Q 027870 113 KNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMR 178 (217)
Q Consensus 113 ~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiR 178 (217)
+..+..|.|...|+.|||+|+.. +. .-.+.+||++.+|+|..|...+++.....++-
T Consensus 135 G~~~p~H~H~g~E~~~VL~G~f~----de-----~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~ 191 (195)
T 2q1z_B 135 GQAVPDHGHRGLELTLVLQGAFR----DE-----TDRFGAGDIEIADQELEHTPVAERGLDCICLA 191 (195)
T ss_dssp TCBCCCCCCSSCEEEEEEESEEE----CS-----SSEEETTCEEEECSSCCCCCEECSSSCEEEEE
T ss_pred CCCCCCcCCCCeEEEEEEEEEEE----CC-----cEEECCCeEEEeCcCCccCCEeCCCCCEEEEE
Confidence 34688999999999999999833 34 34688999999999999999997444444443
No 109
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=97.81 E-value=3.3e-05 Score=62.74 Aligned_cols=95 Identities=15% Similarity=0.168 Sum_probs=62.7
Q ss_pred eeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC--CC
Q 027870 94 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD--TS 171 (217)
Q Consensus 94 ~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~--~~ 171 (217)
..-++.+.|.. .+..|.|...|..|||+|+..|+ +. + ..+.+||++..|+|..|...+. ++
T Consensus 43 ~v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~--e~-~----~~~~~Gd~~~~P~g~~H~~~~~~~~~ 105 (159)
T 3ebr_A 43 TITLLKAPAGM----------EMPRHHHTGTVIVYTVQGSWRYK--EH-D----WVAHAGSVVYETASTRHTPQSAYAEG 105 (159)
T ss_dssp EEEEEEECSSC----------BCCCEEESSCEEEEEEESCEEET--TS-S----CCBCTTCEEEECSSEEECEEESSSSS
T ss_pred EEEEEEECCCC----------CcccccCCCCEEEEEEEeEEEEe--CC-C----eEECCCeEEEECCCCcceeEeCCCCC
Confidence 44567777653 57899999999999999998874 22 2 3688999999999999999887 44
Q ss_pred CcEEEEEE------EcCCCceEEeCCCCCCcHHHHHHHHhhc
Q 027870 172 NYVKLMRL------FVGEPVWTAYNRPQEDHPARKEYIKGLT 207 (217)
Q Consensus 172 ~~~~aiRl------F~~~~gW~~~~r~~d~~~~R~~y~~~~~ 207 (217)
....++-. |.++.|.+- ++ .|-......|.+...
T Consensus 106 e~~~~~~~~~G~l~~~~~~g~~~-~~-~d~~~~~~~~~~~~~ 145 (159)
T 3ebr_A 106 PDIITFNIVAGELLYLDDKDNII-AV-ENWKTSMDRYLNYCK 145 (159)
T ss_dssp SCEEEEEEEESCEEEECTTCCEE-EE-ECHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCccEecCCCCCEE-EE-cCHHHHHHHHHHHHH
Confidence 44444432 333333222 00 244445555555544
No 110
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=97.70 E-value=6.7e-05 Score=62.44 Aligned_cols=60 Identities=25% Similarity=0.405 Sum_probs=46.7
Q ss_pred cCccccccCCC-------ceEEEEEeceEEEEEecCCC----------------cEEEEEEeCCCEEEeCCCCeeeeeeC
Q 027870 113 KNFYTEHIHAD-------EEIRYCLEGSGYFDVRDESD----------------QWIRIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 113 ~~f~~eH~H~~-------dEiryileG~g~f~v~~~~d----------------~wi~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
++..++|.|.. .|-++|+.|.+++.+++..- -|-.+.++|||.+.||+|++|||.++
T Consensus 63 GQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIppg~~H~f~ag 142 (175)
T 2y0o_A 63 GQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHWFQAG 142 (175)
T ss_dssp TCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEECTTCCEEEEEE
T ss_pred CCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEECCCCcEEEEeC
Confidence 34678999975 56677999999999975421 12357999999999999999999995
Q ss_pred CCC
Q 027870 170 TSN 172 (217)
Q Consensus 170 ~~~ 172 (217)
+++
T Consensus 143 eeg 145 (175)
T 2y0o_A 143 EEG 145 (175)
T ss_dssp EEE
T ss_pred CCC
Confidence 544
No 111
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.70 E-value=0.00012 Score=57.10 Aligned_cols=51 Identities=20% Similarity=0.296 Sum_probs=41.9
Q ss_pred ccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 117 TEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 117 ~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
..+.+.++|..|||+|++.+..++. . .+.+++||++++|+|..-..+..+.
T Consensus 55 ~~~~~~~~E~~~iLeG~~~lt~ddG--~--~~~l~aGD~~~~P~G~~gtWev~e~ 105 (116)
T 3es4_A 55 NYAGRDLEETFVVVEGEALYSQADA--D--PVKIGPGSIVSIAKGVPSRLEILSS 105 (116)
T ss_dssp EECCCSEEEEEEEEECCEEEEETTC--C--CEEECTTEEEEECTTCCEEEEECSC
T ss_pred ECeeCCCcEEEEEEEeEEEEEeCCC--e--EEEECCCCEEEECCCCeEEEEEeEE
Confidence 3444556799999999999988643 2 6899999999999999998887664
No 112
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.60 E-value=0.0003 Score=60.95 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=51.3
Q ss_pred CCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc-----CCCceEEeCCCCC
Q 027870 121 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV-----GEPVWTAYNRPQE 194 (217)
Q Consensus 121 H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~-----~~~gW~~~~r~~d 194 (217)
++.+|+.|||+|+.....+++ .+.+++||+++||+|+.|++.+.+.-...- ..+. ..+|=+++.+.++
T Consensus 63 ~p~dE~~~VleG~~~lt~~g~-----~~~~~~Gd~~~ip~G~~~~w~~~~~~~~~y-~~~~~~~~p~~~~~~~i~~~~~ 135 (238)
T 3myx_A 63 YPYTEMLVMHRGSVTLTSGTD-----SVTLSTGESAVIGRGTQVRIDAQPESLWAF-CASTQASGPDKSGITALDRLAL 135 (238)
T ss_dssp CSSEEEEEEEESEEEEEETTE-----EEEEETTCEEEECTTCCEEEEECTTEEEEE-EEECSCCSCCCCSEEEECTTCC
T ss_pred CCCcEEEEEEEeEEEEECCCe-----EEEEcCCCEEEECCCCEEEEEecCCeEEEE-EeccCCCCCCCCccEEecCCCC
Confidence 445899999999999988666 899999999999999999999987643322 3344 2355566655443
No 113
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=97.54 E-value=0.00012 Score=70.19 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=30.8
Q ss_pred EEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 148 IWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 148 i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
..+++||+|.||||+.||..++++..+.++-++..
T Consensus 174 ~~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~Dt 208 (531)
T 3fz3_A 174 RRIREGDVVAIPAGVAYWSYNDGDQELVAVNLFHV 208 (531)
T ss_dssp EEEETTEEEEECTTCCEEEECCSSSCEEEEEEEET
T ss_pred ecccCCcEEEECCCCeEEEEeCCCceEEEEEEEcc
Confidence 46799999999999999999999998888877643
No 114
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=97.46 E-value=7.1e-05 Score=61.31 Aligned_cols=60 Identities=20% Similarity=0.299 Sum_probs=47.0
Q ss_pred eeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 95 MDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 95 ~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
.-++.+.|.. .+..|.|...|..|||+|+..+. +.. ...+++||++.+|+|..|...+.+
T Consensus 45 v~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~f~~~--~~~----~~~~~aGd~~~~P~g~~H~~~a~~ 104 (165)
T 3cjx_A 45 VMRASFAPGL----------TLPLHFHTGTVHMYTISGCWYYT--EYP----GQKQTAGCYLYEPGGSIHQFNTPR 104 (165)
T ss_dssp EEEEEECTTC----------BCCEEEESSCEEEEEEESEEEET--TCT----TSCEETTEEEEECTTCEECEECCT
T ss_pred EEEEEECCCC----------cCCcccCCCCEEEEEEEEEEEEC--CCc----eEEECCCeEEEeCCCCceeeEeCC
Confidence 4566666653 57899999999999999998873 211 145789999999999999988854
No 115
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=97.45 E-value=0.00053 Score=60.03 Aligned_cols=66 Identities=17% Similarity=0.239 Sum_probs=52.7
Q ss_pred CccccccCC-CceEEEEEeceEEEEEecC-CCcEEEEEE--eCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 114 NFYTEHIHA-DEEIRYCLEGSGYFDVRDE-SDQWIRIWI--KAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 114 ~f~~eH~H~-~dEiryileG~g~f~v~~~-~d~wi~i~v--~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
..-.+|.|. ..|.++|++|++.+++++. .++|+.+.+ +..+.+.||+|..|.|.+.++.....|-+
T Consensus 283 ~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~~ 352 (369)
T 3st7_A 283 ITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMW 352 (369)
T ss_dssp CEEEEEECSSCCEEEEEEESEEEEEEEETTCCCCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEEE
T ss_pred ceeccccccCcceEEEEEeeeEEEEEEcCCCCcEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEEe
Confidence 346789997 6799999999999999965 467877776 33499999999999999977655655544
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.28 E-value=0.00044 Score=59.00 Aligned_cols=64 Identities=20% Similarity=0.229 Sum_probs=48.3
Q ss_pred eeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEE
Q 027870 96 DLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVK 175 (217)
Q Consensus 96 Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~ 175 (217)
-++.+.|.. .+..|.|...|..|||+|+.. +. .-.+.+||++.+|+|+.|...+ ++..+.
T Consensus 46 ~lvr~~pG~----------~~p~H~H~g~Ee~~VL~G~f~----d~-----~~~~~~Gd~~~~P~g~~H~p~a-~~gc~~ 105 (223)
T 3o14_A 46 SIVRYAPGS----------RFSAHTHDGGEEFIVLDGVFQ----DE-----HGDYPAGTYVRNPPTTSHVPGS-AEGCTI 105 (223)
T ss_dssp EEEEECTTE----------ECCCEECTTCEEEEEEEEEEE----ET-----TEEEETTEEEEECTTCEECCEE-SSCEEE
T ss_pred EEEEECCCC----------CcccccCCCCEEEEEEEeEEE----EC-----CeEECCCeEEEeCCCCccccEe-CCCCEE
Confidence 356666653 578999999999999999954 23 2578899999999999999887 445444
Q ss_pred EEEE
Q 027870 176 LMRL 179 (217)
Q Consensus 176 aiRl 179 (217)
-+.+
T Consensus 106 ~vk~ 109 (223)
T 3o14_A 106 FVKL 109 (223)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 4443
No 117
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=96.98 E-value=0.0011 Score=53.99 Aligned_cols=66 Identities=14% Similarity=0.099 Sum_probs=49.6
Q ss_pred eeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCC
Q 027870 94 YMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSN 172 (217)
Q Consensus 94 ~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~ 172 (217)
..-++...+.. .+..|.|+..|..|+|+|+..+.-++..+. -.+.+|+++..|+|..|.....++.
T Consensus 47 ~t~lvr~~pG~----------~~p~H~H~g~ee~~VL~G~~~~~~Gd~~~~---~~~~aGsYv~ePpGs~H~p~~~~~~ 112 (153)
T 3bal_A 47 WTAIFNCPAGS----------SFASHIHAGPGEYFLTKGKMEVRGGEQEGG---STAYAPSYGFESSGALHGKTFFPVE 112 (153)
T ss_dssp EEEEEEECTTE----------EECCEEESSCEEEEEEESEEEETTCGGGTS---EEEESSEEEEECTTCEESCCEESSC
T ss_pred EEEEEEeCCCC----------CccCccCCCCEEEEEEEEEEEecCccccCc---cccCCCeEEEcCCCCcccceeCCCC
Confidence 45666666653 689999999999999999998865543222 4568999999999999985544333
No 118
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=96.71 E-value=0.0036 Score=54.15 Aligned_cols=47 Identities=17% Similarity=0.298 Sum_probs=39.6
Q ss_pred cCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 120 IHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 120 ~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
.|+.+|+.|||+|+..+...+. + .+.+++||.+++|+|..=.++..+
T Consensus 183 ~~~~~E~~~ILeG~v~lt~~~G--~--~~~~~aGD~~~~P~G~~~tWev~e 229 (238)
T 3myx_A 183 PHKIHELMNLIEGRVVLSLENG--S--SLTVNTGDTVFVAQGAPCKWTSTG 229 (238)
T ss_dssp ECSSCEEEEEEECCEEEEETTS--C--EEEECTTCEEEECTTCEEEEEESS
T ss_pred cCCCCEEEEEEEeEEEEEeCCC--C--EEEECCCCEEEECCCCEEEEEECc
Confidence 3467899999999999987532 2 799999999999999998888765
No 119
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=96.45 E-value=0.012 Score=46.93 Aligned_cols=68 Identities=18% Similarity=0.231 Sum_probs=48.9
Q ss_pred CccccccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCE-EEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 027870 114 NFYTEHIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDL-IVLPAGIYHRFTLDTSNYVKLMRLFVGEP 184 (217)
Q Consensus 114 ~f~~eH~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDl-IiIPaG~~H~F~~~~~~~~~aiRlF~~~~ 184 (217)
..-.+|.|. ..|+++|+.|+..+.+.+... --++.+...+. |.||+|+.|.+..-+++. .+-.+.+.+
T Consensus 46 ~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~~-~~~~~L~~~~~gL~IppgvWh~~~~~s~~a--vllvlas~~ 115 (141)
T 2pa7_A 46 EPRGFHAHKKLEQVLVCLNGSCRVILDDGNI-IQEITLDSPAVGLYVGPAVWHEMHDFSSDC--VMMVLASDY 115 (141)
T ss_dssp CCEEEEEESSCCEEEEEEESCEEEEEECSSC-EEEEEECCTTEEEEECTTCEEEEECCCTTC--EEEEEESSC
T ss_pred CEECcCcCCCceEEEEEEccEEEEEEECCcE-EEEEEECCCCcEEEeCCCEEEEEEEcCCCe--EEEEECCCC
Confidence 346789996 689999999999999975322 23555655555 999999999998876652 233344444
No 120
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.21 E-value=0.012 Score=49.56 Aligned_cols=61 Identities=15% Similarity=0.085 Sum_probs=50.1
Q ss_pred cCccccccCCCceEEEEEe-ceEEEEEecCC-----CcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 027870 113 KNFYTEHIHADEEIRYCLE-GSGYFDVRDES-----DQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 113 ~~f~~eH~H~~dEiryile-G~g~f~v~~~~-----d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~ 173 (217)
+..-..|.|....+..|+. |+..-.+-|.. ++|..+.+.++-.|.||+|..|-|.+-+++.
T Consensus 70 GvlRGlH~h~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~a 136 (197)
T 1nxm_A 70 NVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDFV 136 (197)
T ss_dssp TBEEEEEECSSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSEE
T ss_pred CCcceeeecccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCCe
Confidence 4556788899999999999 99654444333 6799999999999999999999998877653
No 121
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.14 E-value=0.017 Score=48.08 Aligned_cols=60 Identities=17% Similarity=0.374 Sum_probs=47.1
Q ss_pred cCccccccC---CCceEEEEEeceEE---EEEecCC---CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 027870 113 KNFYTEHIH---ADEEIRYCLEGSGY---FDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 172 (217)
Q Consensus 113 ~~f~~eH~H---~~dEiryileG~g~---f~v~~~~---d~wi~i~v~~--GDlIiIPaG~~H~F~~~~~~ 172 (217)
+..-..|.| ...++..|+.|+.. ++++... ++|..+.+.+ +..|.||+|..|-|.+-+++
T Consensus 58 GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 128 (185)
T 1ep0_A 58 GVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE 128 (185)
T ss_dssp TBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 445567877 68999999999986 4444211 5899999986 57899999999999987766
No 122
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=96.02 E-value=0.054 Score=44.65 Aligned_cols=60 Identities=10% Similarity=0.107 Sum_probs=49.4
Q ss_pred cCccccccCC-CceEEEEEeceEEEEEecC-C-----CcEEEEEEe---CCCEEEeCCCCeeeeeeCCCC
Q 027870 113 KNFYTEHIHA-DEEIRYCLEGSGYFDVRDE-S-----DQWIRIWIK---AGDLIVLPAGIYHRFTLDTSN 172 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG~g~f~v~~~-~-----d~wi~i~v~---~GDlIiIPaG~~H~F~~~~~~ 172 (217)
+..-..|.|. ..++..|+.|+....+.|. . ++|..+.+. ++-.|.||+|..|-|.+-+++
T Consensus 63 GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~ 132 (174)
T 3ejk_A 63 RRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDT 132 (174)
T ss_dssp TCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTS
T ss_pred CCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCC
Confidence 4456788885 7899999999999988653 1 579999998 567899999999999987763
No 123
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=95.96 E-value=0.023 Score=47.22 Aligned_cols=60 Identities=23% Similarity=0.362 Sum_probs=47.1
Q ss_pred cCccccccC---CCceEEEEEeceEE---EEEecCC---CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 027870 113 KNFYTEHIH---ADEEIRYCLEGSGY---FDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 172 (217)
Q Consensus 113 ~~f~~eH~H---~~dEiryileG~g~---f~v~~~~---d~wi~i~v~~--GDlIiIPaG~~H~F~~~~~~ 172 (217)
+..-..|.| ....+..|+.|+.. ++++... ++|..+.+.+ +..|.||+|..|-|.+-+++
T Consensus 59 GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~ 129 (184)
T 2ixk_A 59 GVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY 129 (184)
T ss_dssp TBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE
T ss_pred CceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC
Confidence 445567877 57899999999986 4444211 5899999887 57899999999999987766
No 124
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.96 E-value=0.019 Score=51.07 Aligned_cols=47 Identities=17% Similarity=0.231 Sum_probs=42.1
Q ss_pred ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEE
Q 027870 124 EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVK 175 (217)
Q Consensus 124 dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~ 175 (217)
+-.+++++|+....++++ .+.+++||.|.||||+.|.+...++....
T Consensus 227 d~wiWqLEGss~Vt~~~q-----~~~L~~~DsLLIpa~~~y~~~r~~gsv~L 273 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTMGGR-----RLSLAPDDSLLVLAGTSYAWERTQGSVAL 273 (286)
T ss_dssp CEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEEECTTCEEE
T ss_pred cEEEEEEcCceEEEECCe-----EEeccCCCEEEecCCCeEEEEecCCeEEE
Confidence 777999999999999988 89999999999999999999998875433
No 125
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=95.79 E-value=0.034 Score=47.10 Aligned_cols=61 Identities=20% Similarity=0.358 Sum_probs=48.1
Q ss_pred cCccccccCC----CceEEEEEeceE---EEEEecCC---CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCCc
Q 027870 113 KNFYTEHIHA----DEEIRYCLEGSG---YFDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 113 ~~f~~eH~H~----~dEiryileG~g---~f~v~~~~---d~wi~i~v~~--GDlIiIPaG~~H~F~~~~~~~ 173 (217)
+..-..|.|. ..++..|+.|++ .++++... ++|..+.+.+ +-.|.||+|..|-|.+-+++.
T Consensus 80 GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a 152 (205)
T 3ryk_A 80 GTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHT 152 (205)
T ss_dssp TBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSE
T ss_pred CcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCE
Confidence 4455677774 789999999997 55655332 6899999986 788999999999999877663
No 126
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=95.71 E-value=0.037 Score=45.92 Aligned_cols=61 Identities=25% Similarity=0.457 Sum_probs=46.8
Q ss_pred cCccccccC----CCceEEEEEeceEE---EEEecCC---CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCCc
Q 027870 113 KNFYTEHIH----ADEEIRYCLEGSGY---FDVRDES---DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 113 ~~f~~eH~H----~~dEiryileG~g~---f~v~~~~---d~wi~i~v~~--GDlIiIPaG~~H~F~~~~~~~ 173 (217)
+..-..|.| ....+..|+.|+.. ++++... ++|..+.+.+ +..|.||+|..|-|.+-+++.
T Consensus 57 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~a 129 (183)
T 1dzr_A 57 NVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYA 129 (183)
T ss_dssp TBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEE
T ss_pred CeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCe
Confidence 445567877 56899999999986 4444211 5699999887 478999999999999877663
No 127
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.69 E-value=0.019 Score=54.11 Aligned_cols=57 Identities=5% Similarity=0.091 Sum_probs=46.6
Q ss_pred CCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcC
Q 027870 121 HADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 121 H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~ 182 (217)
.+.|+++++-+|++.+.-+=- .+.+++||+++||.|+.++..+.+..+..++-.|..
T Consensus 176 aDGD~Livpq~G~l~i~TEfG-----~L~v~pgei~VIPRGi~frv~l~~p~Rgyi~E~~g~ 232 (471)
T 1eyb_A 176 SDGDFLIVPQKGNLLIYTEFG-----KMLVQPNEICVIQRGMRFSIDVFEETRGYILEVYGV 232 (471)
T ss_dssp SSEEEEEEEEESCEEEEETTE-----EEEECTTEEEEECTTCCEEEECSSSEEEEEEEEESC
T ss_pred CCCCEEEEEEeCCEEEEEecc-----cEEeccCCEEEECCccEEEEeeCCCceEEEEEccCC
Confidence 357999999999999988854 799999999999999999999876444555555544
No 128
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=95.40 E-value=0.1 Score=42.65 Aligned_cols=71 Identities=15% Similarity=0.232 Sum_probs=55.2
Q ss_pred CccccccCCC-ceEEEEEeceEEEEEecCCCcE----EEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 027870 114 NFYTEHIHAD-EEIRYCLEGSGYFDVRDESDQW----IRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 184 (217)
Q Consensus 114 ~f~~eH~H~~-dEiryileG~g~f~v~~~~d~w----i~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~ 184 (217)
+.-..|-|.. ..+.+|++|+....+-..++.+ -+..+.+||..+.|+|-.|++.+..+.....|.+|..+-
T Consensus 80 q~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp~ 155 (171)
T 3eqe_A 80 KETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPL 155 (171)
T ss_dssp CBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEEEEEEESCC
T ss_pred CCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCCCc
Confidence 3456799985 7888899999997653212111 256789999999999999999987778888999998764
No 129
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=95.24 E-value=0.074 Score=43.89 Aligned_cols=73 Identities=14% Similarity=0.208 Sum_probs=54.7
Q ss_pred CccccccCCCceEEEEEeceE-EEEEecCCCcEEEEE----EeCCCE--EEeCCCCeeeeeeCCCCcEEEEEEEcCCCce
Q 027870 114 NFYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIW----IKAGDL--IVLPAGIYHRFTLDTSNYVKLMRLFVGEPVW 186 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g-~f~v~~~~d~wi~i~----v~~GDl--IiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW 186 (217)
.+-.+|....+||.|+..|.+ .+.+-+.++...++. +.+|+. ++||+|+.+...+.+..+ ++--..=.|||
T Consensus 60 ~~S~~HRv~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge~pQ~vVP~G~wqaa~~~~g~~--~LV~C~VaPGF 137 (170)
T 1yud_A 60 EVSHFHRLTADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNQDGF--SLVGCMVSPGF 137 (170)
T ss_dssp CCEEEEECSSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTEESCEEECTTCEEEEEESSSSE--EEEEEEESSCC
T ss_pred CCCeeEEcCCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCceeEEEECCCCEEEEEECCCCc--EEEEEEECCCc
Confidence 355678888999999999997 776755566655555 567888 999999999987763333 55666667888
Q ss_pred EE
Q 027870 187 TA 188 (217)
Q Consensus 187 ~~ 188 (217)
..
T Consensus 138 ~f 139 (170)
T 1yud_A 138 TF 139 (170)
T ss_dssp CG
T ss_pred cC
Confidence 65
No 130
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=95.14 E-value=0.065 Score=45.70 Aligned_cols=61 Identities=18% Similarity=0.257 Sum_probs=47.2
Q ss_pred cCccccccCC----CceEEEEEeceEE---EEEecC---CCcEEEEEEeCC--CEEEeCCCCeeeeeeCCCCc
Q 027870 113 KNFYTEHIHA----DEEIRYCLEGSGY---FDVRDE---SDQWIRIWIKAG--DLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 113 ~~f~~eH~H~----~dEiryileG~g~---f~v~~~---~d~wi~i~v~~G--DlIiIPaG~~H~F~~~~~~~ 173 (217)
+..-..|.|. ...+..|+.|++. ++++.. -++|..+.+.+. ..|.||+|..|-|.+-+++.
T Consensus 65 GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 137 (216)
T 2c0z_A 65 GVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEA 137 (216)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEE
T ss_pred CcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCe
Confidence 4455677775 6899999999986 455422 157999999875 68999999999999877663
No 131
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=94.98 E-value=0.13 Score=43.13 Aligned_cols=72 Identities=14% Similarity=0.085 Sum_probs=56.0
Q ss_pred cCccccccCCCceEEEEEeceEEEEEec--CCCcEE----EEEEeCCCEEEeCC--CCeeeeeeC-CCCcEEEEEEEcCC
Q 027870 113 KNFYTEHIHADEEIRYCLEGSGYFDVRD--ESDQWI----RIWIKAGDLIVLPA--GIYHRFTLD-TSNYVKLMRLFVGE 183 (217)
Q Consensus 113 ~~f~~eH~H~~dEiryileG~g~f~v~~--~~d~wi----~i~v~~GDlIiIPa--G~~H~F~~~-~~~~~~aiRlF~~~ 183 (217)
++....|-|....+++|++|+..-.+-. .++..+ +..+.+|+.+.+++ |-.|+..+. ++.....|.+|..+
T Consensus 89 Gq~spiHdH~~~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~~ 168 (208)
T 2gm6_A 89 GQRTPIHDHTVWGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGAN 168 (208)
T ss_dssp TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred CcccCcccCCcceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcCC
Confidence 4567899998899999999999766522 122222 57899999999999 999999865 56678889998774
Q ss_pred C
Q 027870 184 P 184 (217)
Q Consensus 184 ~ 184 (217)
-
T Consensus 169 ~ 169 (208)
T 2gm6_A 169 I 169 (208)
T ss_dssp G
T ss_pred C
Confidence 3
No 132
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=94.87 E-value=0.11 Score=43.63 Aligned_cols=60 Identities=13% Similarity=0.195 Sum_probs=46.4
Q ss_pred cCccccccCC----CceEEEEEeceEEE-EEecCC-----CcEEEEEEeC--CCEEEeCCCCeeeeeeCCCC
Q 027870 113 KNFYTEHIHA----DEEIRYCLEGSGYF-DVRDES-----DQWIRIWIKA--GDLIVLPAGIYHRFTLDTSN 172 (217)
Q Consensus 113 ~~f~~eH~H~----~dEiryileG~g~f-~v~~~~-----d~wi~i~v~~--GDlIiIPaG~~H~F~~~~~~ 172 (217)
+..-..|.|. ...+..|+.|+.+. .|+... ++|..+.+.+ +..|.||+|..|-|.+-+++
T Consensus 75 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 75 GVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp TBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE
T ss_pred CcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC
Confidence 4456678775 68999999999954 333222 5699999986 68899999999999987764
No 133
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=94.08 E-value=0.26 Score=41.51 Aligned_cols=61 Identities=21% Similarity=0.382 Sum_probs=46.3
Q ss_pred cCccccccCC----CceEEEEEeceEE---EEEecC---CCcEEEEEEeC--CCEEEeCCCCeeeeeeCCCCc
Q 027870 113 KNFYTEHIHA----DEEIRYCLEGSGY---FDVRDE---SDQWIRIWIKA--GDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 113 ~~f~~eH~H~----~dEiryileG~g~---f~v~~~---~d~wi~i~v~~--GDlIiIPaG~~H~F~~~~~~~ 173 (217)
+..-..|.|. ...+..|+.|+.. ++++.. =++|..+.+.+ +..|.||+|..|-|.+-+++.
T Consensus 57 GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~a 129 (205)
T 1oi6_A 57 GVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDDT 129 (205)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTTE
T ss_pred CeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCCe
Confidence 4455677774 6899999999986 333311 15699999887 478999999999999877664
No 134
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=93.67 E-value=0.14 Score=44.99 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=46.7
Q ss_pred cccccCCCc---------eEEEE-E---eceEEEEEec---CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEE
Q 027870 116 YTEHIHADE---------EIRYC-L---EGSGYFDVRD---ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 116 ~~eH~H~~d---------Eiryi-l---eG~g~f~v~~---~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRl 179 (217)
|+.|.|+.+ |++|+ + .|.|.-.+-. ..|+ .+.|+.||.++||.|- |--.+.+.-...-|-.
T Consensus 168 yPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de--~~~V~~~d~VlvP~Gy-Hp~~a~pGy~~Yylwv 244 (270)
T 2qjv_A 168 WPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDE--CMAVYNRDVVXVPXGY-HPVATIAGYDNYYLNV 244 (270)
T ss_dssp CSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEE--EEEEETTCEEEESSSB-CCEEECTTCEEEEEEE
T ss_pred CCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCce--EEEEECCCEEecCCCc-CCCcCCCCcccEEEEE
Confidence 789999864 99987 4 3666666611 1222 6999999999999999 9855443222222222
Q ss_pred Ec-CCCceEEeCCC
Q 027870 180 FV-GEPVWTAYNRP 192 (217)
Q Consensus 180 F~-~~~gW~~~~r~ 192 (217)
-. ....|...+.|
T Consensus 245 MaG~~r~~~~~~dP 258 (270)
T 2qjv_A 245 MAGPLRXWRFTWEE 258 (270)
T ss_dssp EECSSCCCCCEECG
T ss_pred EECCCccccccCCC
Confidence 22 33457665554
No 135
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=93.63 E-value=0.15 Score=41.28 Aligned_cols=52 Identities=12% Similarity=0.323 Sum_probs=40.1
Q ss_pred ccCCCceEEEEEeceEEEEEecCC----------------------------------CcEEEEEEeCCCEEEeCCCCee
Q 027870 119 HIHADEEIRYCLEGSGYFDVRDES----------------------------------DQWIRIWIKAGDLIVLPAGIYH 164 (217)
Q Consensus 119 H~H~~dEiryileG~g~f~v~~~~----------------------------------d~wi~i~v~~GDlIiIPaG~~H 164 (217)
|.-..+-+...+.|+=.+.+-... -..+++.++|||+|.||+|-.|
T Consensus 140 H~D~~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~gW~H 219 (235)
T 4gjz_A 140 HQDPQQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSPGEILFIPVKYWH 219 (235)
T ss_dssp ECCSSEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEECTTCEEEECTTCEE
T ss_pred eeccccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEECCCCEEEeCCCCcE
Confidence 444456677788999999884211 1467899999999999999999
Q ss_pred eeeeCC
Q 027870 165 RFTLDT 170 (217)
Q Consensus 165 ~F~~~~ 170 (217)
...+.+
T Consensus 220 ~V~~l~ 225 (235)
T 4gjz_A 220 YVRALD 225 (235)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 988765
No 136
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=93.59 E-value=0.073 Score=45.15 Aligned_cols=50 Identities=16% Similarity=0.095 Sum_probs=39.4
Q ss_pred CccccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 027870 114 NFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~ 173 (217)
.-+..|.|..+|+ +||+|+.. +. .-...+|+.|.+|+|..|.+.++++..
T Consensus 157 ~~~~~~~hgG~Ei-lVL~G~~~----d~-----~~~~~~GsWlR~P~gs~h~~~ag~~g~ 206 (223)
T 3o14_A 157 ANLTSEAAGGIEV-LVLDGDVT----VN-----DEVLGRNAWLRLPEGEALSATAGARGA 206 (223)
T ss_dssp CEEEECCSSCEEE-EEEEEEEE----ET-----TEEECTTEEEEECTTCCEEEEEEEEEE
T ss_pred CccCCCCCCcEEE-EEEEeEEE----EC-----CceECCCeEEEeCCCCccCcEECCCCe
Confidence 4578899977887 99999953 23 257789999999999999998865543
No 137
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=93.56 E-value=0.38 Score=41.16 Aligned_cols=61 Identities=20% Similarity=0.368 Sum_probs=46.6
Q ss_pred cCccccccCC----CceEEEEEeceEE---EEEecC---CCcEEEEEEeCC--CEEEeCCCCeeeeeeCCCCc
Q 027870 113 KNFYTEHIHA----DEEIRYCLEGSGY---FDVRDE---SDQWIRIWIKAG--DLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 113 ~~f~~eH~H~----~dEiryileG~g~---f~v~~~---~d~wi~i~v~~G--DlIiIPaG~~H~F~~~~~~~ 173 (217)
+..-..|.|. ...+..|+.|++. ++++.. -++|..+.+.+. ..|.||+|..|-|.+-+++.
T Consensus 76 GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 148 (225)
T 1upi_A 76 GVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNS 148 (225)
T ss_dssp TBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSE
T ss_pred CeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCE
Confidence 4455677774 6899999999986 333321 156999999875 78999999999999877664
No 138
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=93.52 E-value=0.17 Score=44.08 Aligned_cols=59 Identities=22% Similarity=0.283 Sum_probs=42.3
Q ss_pred cCccccccCC-CceEEEEEec---eEEEEEecCC-------------CcE------EEEEEeCCCEEEeCCCCeeeeeeC
Q 027870 113 KNFYTEHIHA-DEEIRYCLEG---SGYFDVRDES-------------DQW------IRIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 113 ~~f~~eH~H~-~dEiryileG---~g~f~v~~~~-------------d~w------i~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
++..++|.|. -.|-+.+.-| ..+....+.+ |.+ =.|.+.||+-|.||+|++|||-+.
T Consensus 116 gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~Pg~~H~F~ae 195 (246)
T 3kmh_A 116 AQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLPPGLYHSFWAE 195 (246)
T ss_dssp TCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEECTTEEEEEEEC
T ss_pred CCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecCCCCEEEEEec
Confidence 3557899997 4777777777 4444444322 111 146889999999999999999998
Q ss_pred CC
Q 027870 170 TS 171 (217)
Q Consensus 170 ~~ 171 (217)
+.
T Consensus 196 ~g 197 (246)
T 3kmh_A 196 AG 197 (246)
T ss_dssp TT
T ss_pred CC
Confidence 86
No 139
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=93.29 E-value=0.42 Score=41.41 Aligned_cols=65 Identities=12% Similarity=0.225 Sum_probs=48.5
Q ss_pred ccccccCCCc-eEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCC--CCeeeeee-CCCCcEEEEEEEcCC
Q 027870 115 FYTEHIHADE-EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA--GIYHRFTL-DTSNYVKLMRLFVGE 183 (217)
Q Consensus 115 f~~eH~H~~d-EiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPa--G~~H~F~~-~~~~~~~aiRlF~~~ 183 (217)
=|..|.|.+. .|-|+++|+....=. -+. .-.+++||+-..-| |+.|.=.. .++..+..++|....
T Consensus 76 gf~~HPHrg~EtvTyvl~G~~~H~DS--~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQlWi~l 144 (256)
T 2vec_A 76 AFQPRTYPKVDILNVILDGEAEYRDS--EGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQLWLDA 144 (256)
T ss_dssp EEEEECCSSEEEEEEEEESEEEEEET--TSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEEEEEC
T ss_pred ccCCcCCCCcEEEEEEEeeEEEEEeC--CCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEEEEeC
Confidence 3689999865 578999999887533 122 67899999999977 57998655 445678888887553
No 140
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=93.06 E-value=0.75 Score=36.23 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=52.4
Q ss_pred hcCccccc----cCCC-ceEEEEEeceEEEEEecCCCc---EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 112 LKNFYTEH----IHAD-EEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 112 ~~~f~~eH----~H~~-dEiryileG~g~f~v~~~~d~---wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
.+.+...| +|.. -+.+-|++|+..|..-+.++. --.+...+|+..+|||+..|+...-.++-..-|.||..+
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leFyc~~ 102 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFFVAP 102 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEEEECH
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEEEeCC
Confidence 35567778 5764 588889999999885333222 224678899999999999999997555544447777655
Q ss_pred C
Q 027870 184 P 184 (217)
Q Consensus 184 ~ 184 (217)
+
T Consensus 103 ~ 103 (127)
T 3bb6_A 103 E 103 (127)
T ss_dssp H
T ss_pred c
Confidence 3
No 141
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=92.79 E-value=0.77 Score=38.66 Aligned_cols=61 Identities=20% Similarity=0.262 Sum_probs=46.7
Q ss_pred cCccccccC----CCceEEEEEeceEEEEEecC------CCcEEEEEEeC--CCEEEeCCCCeeeeeeCCCCc
Q 027870 113 KNFYTEHIH----ADEEIRYCLEGSGYFDVRDE------SDQWIRIWIKA--GDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 113 ~~f~~eH~H----~~dEiryileG~g~f~v~~~------~d~wi~i~v~~--GDlIiIPaG~~H~F~~~~~~~ 173 (217)
+..-..|.| ....+..|+.|+.+-.+-|. =++|..+.+.+ +-.|.||+|..|-|.+-+++.
T Consensus 54 GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a 126 (201)
T 4hn1_A 54 GALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDA 126 (201)
T ss_dssp TBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTE
T ss_pred CceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCe
Confidence 445567776 47899999999975443332 16799999886 778999999999999877653
No 142
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=91.63 E-value=0.69 Score=42.99 Aligned_cols=55 Identities=22% Similarity=0.318 Sum_probs=43.8
Q ss_pred cccccCCCceEEEEEeceEEEEEecCC----------------CcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 116 YTEHIHADEEIRYCLEGSGYFDVRDES----------------DQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 116 ~~eH~H~~dEiryileG~g~f~v~~~~----------------d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
+..|.-..+-+...+.|+=.+.+-... ...+.+.+++||++.||+|..|...+.+
T Consensus 153 ~~~H~D~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 153 LPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp SCSEECSSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred ccceECCcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 457776677788889999999885432 1246789999999999999999998765
No 143
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=91.14 E-value=0.85 Score=43.21 Aligned_cols=65 Identities=20% Similarity=0.300 Sum_probs=49.2
Q ss_pred cccccCCCceEEEEEeceEEEEEecCCC--------------------cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEE
Q 027870 116 YTEHIHADEEIRYCLEGSGYFDVRDESD--------------------QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVK 175 (217)
Q Consensus 116 ~~eH~H~~dEiryileG~g~f~v~~~~d--------------------~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~ 175 (217)
+..|.=+.+-+..-+.|+=.+.+....+ ..+.+.+++||++.||+|..|...+.++..-.
T Consensus 178 ~~pH~D~~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~Sl 257 (489)
T 4diq_A 178 FAPHYDDIEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL 257 (489)
T ss_dssp SCCBCCSSEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEE
T ss_pred ccCccCCcceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCceEEEecCCCceE
Confidence 4567667777888889999998875321 23689999999999999999999987655544
Q ss_pred EEEEE
Q 027870 176 LMRLF 180 (217)
Q Consensus 176 aiRlF 180 (217)
.+.+-
T Consensus 258 hlTi~ 262 (489)
T 4diq_A 258 HLTLS 262 (489)
T ss_dssp EEEEE
T ss_pred EEeec
Confidence 55443
No 144
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=91.12 E-value=0.23 Score=44.12 Aligned_cols=24 Identities=38% Similarity=0.642 Sum_probs=21.1
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 147 RIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 147 ~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
.+.++|||.+.||||+.|.+..+.
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~~~G~ 182 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHALCKGA 182 (319)
T ss_dssp EEECCTTCEEEECTTCCEEECSSE
T ss_pred EEEcCCCCEEEcCCCCceEecCCC
Confidence 789999999999999999976543
No 145
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=90.89 E-value=1.1 Score=40.04 Aligned_cols=65 Identities=9% Similarity=0.085 Sum_probs=47.4
Q ss_pred ccccCCCceEEEEEeceEEEEEecC-------------------------C----------CcEEEEEEeCCCEEEeCCC
Q 027870 117 TEHIHADEEIRYCLEGSGYFDVRDE-------------------------S----------DQWIRIWIKAGDLIVLPAG 161 (217)
Q Consensus 117 ~eH~H~~dEiryileG~g~f~v~~~-------------------------~----------d~wi~i~v~~GDlIiIPaG 161 (217)
..|....+-+...+.|+=.+.+-.. . ...+.+.+++||+|.||+|
T Consensus 197 ~~H~D~~~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~pGD~LyiP~g 276 (349)
T 3d8c_A 197 PAHYGEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMY 276 (349)
T ss_dssp EEECCSEEEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEECTTCEEEECTT
T ss_pred cceECChhcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEECCCCEEEECCC
Confidence 4455555666777889888776321 0 1578999999999999999
Q ss_pred CeeeeeeCC-CCcEEEEEEEc
Q 027870 162 IYHRFTLDT-SNYVKLMRLFV 181 (217)
Q Consensus 162 ~~H~F~~~~-~~~~~aiRlF~ 181 (217)
-.|.....+ +..-.++.++-
T Consensus 277 WwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 277 WWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp CEEEEEECTTSCCEEEEEEEE
T ss_pred CcEEEEEcCCCCcEEEEEEEc
Confidence 999998876 34556677644
No 146
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=90.11 E-value=1.4 Score=37.64 Aligned_cols=63 Identities=24% Similarity=0.405 Sum_probs=47.0
Q ss_pred ccccccCCC-ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCC--CCeeeeee-CCCCcEEEEEEEc
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA--GIYHRFTL-DTSNYVKLMRLFV 181 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPa--G~~H~F~~-~~~~~~~aiRlF~ 181 (217)
=|..|-|.. +.|-|+++|+....=. -+. .-.+++||+-..-| |+.|.=.. .++..+..++|..
T Consensus 53 gf~~HPHrg~EtvTyvl~G~~~H~DS--~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQlWv 119 (242)
T 1tq5_A 53 GFGTHPHKDMEILTYVLEGTVEHQDS--MGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWI 119 (242)
T ss_dssp EEEEEEECSCEEEEEEEESEEEEEES--SSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEEEE
T ss_pred cCCCcCCCCcEEEEEEEEeEEEEEeC--CCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEEEE
Confidence 368999985 5589999999876432 122 67899999988866 58998554 4456788888875
No 147
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=89.91 E-value=0.21 Score=35.89 Aligned_cols=29 Identities=14% Similarity=0.205 Sum_probs=24.6
Q ss_pred CccccccCC-CceEEEEEeceEEEEEecCC
Q 027870 114 NFYTEHIHA-DEEIRYCLEGSGYFDVRDES 142 (217)
Q Consensus 114 ~f~~eH~H~-~dEiryileG~g~f~v~~~~ 142 (217)
..+..|+|+ .-||.||++|++++.+-+..
T Consensus 47 g~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 47 ALFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp CEEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred cCcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 358899998 67999999999999887543
No 148
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=89.71 E-value=1.3 Score=39.56 Aligned_cols=57 Identities=18% Similarity=0.397 Sum_probs=44.5
Q ss_pred CccccccCCCceEEEEEeceEEEEEe-cCC---------------------------------CcEEEEEEeCCCEEEeC
Q 027870 114 NFYTEHIHADEEIRYCLEGSGYFDVR-DES---------------------------------DQWIRIWIKAGDLIVLP 159 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g~f~v~-~~~---------------------------------d~wi~i~v~~GDlIiIP 159 (217)
.-...|.-..+-+...+.|+=.+.+- ..+ ...+.+.++|||+|.||
T Consensus 152 ~~~~~H~D~~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~pGD~LyiP 231 (342)
T 1vrb_A 152 GGFKAHFDAYTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLTPGTMLYLP 231 (342)
T ss_dssp CCCCSEECSSEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEECTTCEEEEC
T ss_pred CCCCCeECChhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEECCCcEEEeC
Confidence 34567776677778888999888887 211 12478899999999999
Q ss_pred CCCeeeeeeCC
Q 027870 160 AGIYHRFTLDT 170 (217)
Q Consensus 160 aG~~H~F~~~~ 170 (217)
+|..|...+.+
T Consensus 232 ~gwwH~v~s~~ 242 (342)
T 1vrb_A 232 RGLWHSTKSDQ 242 (342)
T ss_dssp TTCEEEEECSS
T ss_pred CCccEEEEECC
Confidence 99999998874
No 149
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=89.15 E-value=4 Score=33.78 Aligned_cols=72 Identities=11% Similarity=-0.042 Sum_probs=55.1
Q ss_pred CccccccCC-CceEEEEEeceEEEEEecCC-C------cEEEEEEeCCCEEEe-CCCCeeeeeeCC-CCcEEEEEEEcCC
Q 027870 114 NFYTEHIHA-DEEIRYCLEGSGYFDVRDES-D------QWIRIWIKAGDLIVL-PAGIYHRFTLDT-SNYVKLMRLFVGE 183 (217)
Q Consensus 114 ~f~~eH~H~-~dEiryileG~g~f~v~~~~-d------~wi~i~v~~GDlIiI-PaG~~H~F~~~~-~~~~~aiRlF~~~ 183 (217)
+.-..|-|. .-.+.+|++|+..-..-+.. + ..=...+.+||...+ |++-.|+..+.. +.....|.+|..+
T Consensus 81 q~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~pp 160 (200)
T 3eln_A 81 HGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPP 160 (200)
T ss_dssp CBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEESC
T ss_pred CcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCCCC
Confidence 456789998 57999999999997753221 1 122578899999999 877799999765 6788889999876
Q ss_pred Cc
Q 027870 184 PV 185 (217)
Q Consensus 184 ~g 185 (217)
-+
T Consensus 161 ~~ 162 (200)
T 3eln_A 161 FD 162 (200)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 150
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=88.73 E-value=0.88 Score=40.30 Aligned_cols=38 Identities=18% Similarity=0.274 Sum_probs=30.3
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEE-EEcCCC
Q 027870 145 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMR-LFVGEP 184 (217)
Q Consensus 145 wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiR-lF~~~~ 184 (217)
.+.+.+++||+|.||+|-.|...+.+. -.++- .|...+
T Consensus 239 ~~~~~L~pGD~LyiP~gWwH~v~~l~~--sisvn~~~~~~~ 277 (338)
T 3al5_A 239 RYECSLEAGDVLFIPALWFHNVISEEF--GVGVNIFWKHLP 277 (338)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEESSC--EEEEEEEECSSC
T ss_pred CEEEEECCCCEEEECCCCeEEEeeCCC--EEEEEEEecCCc
Confidence 789999999999999999999988753 34555 466554
No 151
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=86.94 E-value=0.33 Score=42.76 Aligned_cols=26 Identities=19% Similarity=-0.025 Sum_probs=22.1
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 145 WIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 145 wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
--.+.++|||.+.||||+.|.+..+.
T Consensus 157 Ln~v~l~pGd~~~ipaGt~HA~~~G~ 182 (300)
T 1zx5_A 157 LNTFETTPYDTFVIRPGIPHAGEGLR 182 (300)
T ss_dssp EEEEECCTTCEEEECTTCCEEEESEE
T ss_pred hceeECCCCCEEEcCCCCceEcCCCC
Confidence 34788999999999999999987654
No 152
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=86.33 E-value=1.2 Score=39.45 Aligned_cols=50 Identities=18% Similarity=0.232 Sum_probs=27.6
Q ss_pred cccccCC-C-ceEEEEE-ec-eEEEEEecCCCcEEEEEEeCCCEEEeCCCCeee
Q 027870 116 YTEHIHA-D-EEIRYCL-EG-SGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR 165 (217)
Q Consensus 116 ~~eH~H~-~-dEiryil-eG-~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~ 165 (217)
++.|+|+ . |+.+|+- .. ...|...+..|+-+.+.|+-||.+++|.|-+|.
T Consensus 196 yPpHkHDrr~E~yyYF~l~p~~~v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 196 MPCHTHERRMEAYVYFDMEEDTRIFHMMGKPDETKHLVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp --------CEEEEEEESCCTTCCEEEEESSTTSCEEEEECTTEEEEECTTSCCC
T ss_pred CCCccCCCCCeeEEEEEeCCCCeEEEECCCCCceEEEEEECCCEEEeCCCcccC
Confidence 7899998 3 4444442 11 123333445566556899999999999999996
No 153
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=86.17 E-value=1.1 Score=39.75 Aligned_cols=37 Identities=32% Similarity=0.437 Sum_probs=31.1
Q ss_pred CCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCe
Q 027870 122 ADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY 163 (217)
Q Consensus 122 ~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~ 163 (217)
....|..|++|+|.+...+. .+.+++||.++|||+..
T Consensus 268 ~~~~il~v~~G~~~l~~~~~-----~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 268 ESFLICSVIEGSGLLKYEDK-----TCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SSCEEEEEEEEEEEEEETTE-----EEEEETTCEEEECTTCC
T ss_pred CccEEEEEEcCeEEEEECCE-----EEEEcCCcEEEEeCCCc
Confidence 45789999999999876433 68899999999999873
No 154
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=85.65 E-value=2.1 Score=37.61 Aligned_cols=51 Identities=20% Similarity=0.265 Sum_probs=37.2
Q ss_pred CCc-eEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCee-eeeeCCCCcEEEEEEEc
Q 027870 122 ADE-EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYH-RFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 122 ~~d-EiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H-~F~~~~~~~~~aiRlF~ 181 (217)
... .|..|++| |....++. .+.+++||.++|||++.- .+.. + .++++|.|.
T Consensus 246 ~~~~~il~v~~G-~~i~~~~~-----~~~l~~G~~~~ipa~~~~~~i~g--~-~~~~~~a~~ 298 (300)
T 1zx5_A 246 GGVMNILYAAEG-YFILRGKE-----TADLHRGYSCLVPASTDSFTVES--E-RGKIVRIYL 298 (300)
T ss_dssp CSBCEEEEEEES-CEEEESSS-----EEEECTTCEEEECTTCCEEEEEE--E-EEEEEEEEE
T ss_pred CCceEEEEEccc-EEEEeCCe-----EEEEccceEEEEeCCCceEEEEe--C-ceEEEEEEE
Confidence 445 89999999 98877554 678999999999999843 3332 1 366666553
No 155
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=85.09 E-value=3 Score=36.20 Aligned_cols=64 Identities=22% Similarity=0.347 Sum_probs=47.7
Q ss_pred ccccccCCC-ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCC--CCeeeeeeCCCCcEEEEEEEcC
Q 027870 115 FYTEHIHAD-EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPA--GIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 115 f~~eH~H~~-dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPa--G~~H~F~~~~~~~~~aiRlF~~ 182 (217)
=|..|-|.. +-|-|+++|+.... |.-+. .-.+++||+-..-| |+.|.=...++..+..++|...
T Consensus 51 gf~~HPHrg~EtVTyvl~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvn 117 (277)
T 2p17_A 51 TFDVHPHRGIETVTYVISGELEHF--DSKAG--HSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQLWVN 117 (277)
T ss_dssp CCCCEEECSEEEEEEEEESCEEEE--ETTTE--EEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEEEEE
T ss_pred CCCCCCCCCcEEEEEEEEeEEEEe--eCCCC--ceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEEEee
Confidence 478999986 55899999997764 22222 57789999977777 5789866666677888888764
No 156
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=85.02 E-value=10 Score=31.72 Aligned_cols=72 Identities=13% Similarity=0.090 Sum_probs=54.9
Q ss_pred cCccccccCCCceEEEEEeceEEEEEec--CCCcEE----EEEEeCCCEEEeCCC--CeeeeeeC-CCCcEEEEEEEcCC
Q 027870 113 KNFYTEHIHADEEIRYCLEGSGYFDVRD--ESDQWI----RIWIKAGDLIVLPAG--IYHRFTLD-TSNYVKLMRLFVGE 183 (217)
Q Consensus 113 ~~f~~eH~H~~dEiryileG~g~f~v~~--~~d~wi----~i~v~~GDlIiIPaG--~~H~F~~~-~~~~~~aiRlF~~~ 183 (217)
++.-..|-|..--+..|++|+..-.+-. .++... +..+.+||.+.++++ -.|+..+. ++.....|.+|..+
T Consensus 83 Gq~spiHDH~swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~p 162 (211)
T 3uss_A 83 GQITPVHDHRVWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGAN 162 (211)
T ss_dssp TCBCCSBCCSSCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSC
T ss_pred CCcCCCCCCCeeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCCC
Confidence 3457889999889999999998765521 222222 277999999999987 79999865 46678899999887
Q ss_pred C
Q 027870 184 P 184 (217)
Q Consensus 184 ~ 184 (217)
-
T Consensus 163 l 163 (211)
T 3uss_A 163 I 163 (211)
T ss_dssp G
T ss_pred C
Confidence 5
No 157
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=84.02 E-value=2.8 Score=38.29 Aligned_cols=54 Identities=19% Similarity=0.342 Sum_probs=38.0
Q ss_pred cCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEc
Q 027870 120 IHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFV 181 (217)
Q Consensus 120 ~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~ 181 (217)
.++...|..|++|+|.....+. .+.+++||.++|||+..- ++..+ ..+++|.|.
T Consensus 339 ~~~~~~il~v~~G~~~l~~~~~-----~~~l~~G~~~fvpa~~~~-~~i~g--~~~~~~~~~ 392 (394)
T 2wfp_A 339 GQHSAAILFCVEGEAVLRKDEQ-----RLVLKPGESAFIGADESP-VNASG--TGRLARVYN 392 (394)
T ss_dssp CCSSCEEEEEEEEEEEEEETTE-----EEEECTTCEEEECGGGCC-EEEEE--EEEEEEEEC
T ss_pred cCCCcEEEEEEeceEEEEECCe-----EEEEccCcEEEEeCCCce-EEEEe--eeEEEEEEe
Confidence 3445689999999999776543 689999999999998532 22222 255666553
No 158
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=83.97 E-value=2.6 Score=37.28 Aligned_cols=56 Identities=16% Similarity=0.183 Sum_probs=37.8
Q ss_pred cccccCC--CceEEEEE---eceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCc
Q 027870 116 YTEHIHA--DEEIRYCL---EGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNY 173 (217)
Q Consensus 116 ~~eH~H~--~dEiryil---eG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~ 173 (217)
++.|+|+ .||++|+- .|.+.-.+ +..++-..+.|+-||.+++|.+-+|.-- +-+++
T Consensus 196 yPpHkHDrr~EeyyYF~l~~~gfv~q~~-g~p~Etrhi~V~n~daVlvP~wh~h~~~-G~~~Y 256 (282)
T 1xru_A 196 MPCHTHERRMEVYFYFNMDDDACVFHMM-GQPQETRHIVMHNEQAVISPSWSIHSGV-GTKAY 256 (282)
T ss_dssp CSEEECTTEEEEEEEESCCTTCCEEEEE-EETTEEEEEEECSSEEEEECTTCEEEEE-ESSCC
T ss_pred CCCccCCCCceEEEEEEeCCCCEEEEEe-CCCCCeeEEEEECCCEEEeCCCCCCCCC-Cccce
Confidence 7899998 37777764 24444444 4555555678999999999975667633 44443
No 159
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=83.79 E-value=1.8 Score=36.01 Aligned_cols=57 Identities=18% Similarity=0.336 Sum_probs=39.8
Q ss_pred cCccccccCCCce---EEEEEe--ceEEEEEecCC------------------CcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 027870 113 KNFYTEHIHADEE---IRYCLE--GSGYFDVRDES------------------DQWIRIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 113 ~~f~~eH~H~~dE---iryile--G~g~f~v~~~~------------------d~wi~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
+.|...|.|..-- ++|+-- +.|.+.+.+.. ..++.+..++||+|+.|+.+.|.....
T Consensus 113 G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~l~H~V~p~ 192 (216)
T 2rg4_A 113 GGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESWLRHEVPMN 192 (216)
T ss_dssp TCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETTSCEEECCC
T ss_pred CCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCCCEEeccCC
Confidence 6789999997543 345432 33444444321 345688899999999999999998873
No 160
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=83.27 E-value=5.6 Score=30.82 Aligned_cols=59 Identities=19% Similarity=0.303 Sum_probs=41.9
Q ss_pred eEEEEEeceEEEEEecCCCc---EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 027870 125 EIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 184 (217)
Q Consensus 125 EiryileG~g~f~v~~~~d~---wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~ 184 (217)
.-+-|++|+..|..-..++. --.+.+.+|+.-+|||...|+..+.++-.+. |.||..++
T Consensus 40 gkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~sdD~~f~-leFyc~~~ 101 (119)
T 3dl3_A 40 GQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIELSDDAQFN-INFWSDQD 101 (119)
T ss_dssp EEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEECTTCEEE-EEEEECC-
T ss_pred EEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEECCCeEEE-EEEEECch
Confidence 45678999999996322221 1356888999999999999999966554433 67776654
No 161
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=83.14 E-value=0.78 Score=41.96 Aligned_cols=23 Identities=17% Similarity=0.263 Sum_probs=21.0
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeC
Q 027870 147 RIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 147 ~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
.+.++|||.+.||||+.|.+..+
T Consensus 241 ~v~l~pGd~~fipAG~~HAy~~G 263 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAYLQG 263 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred EEECCCCCEEEcCCCCceEcCCC
Confidence 78999999999999999998755
No 162
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=82.53 E-value=1.8 Score=38.70 Aligned_cols=27 Identities=22% Similarity=0.377 Sum_probs=24.4
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 145 WIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 145 wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
.+++.+++||+|.||+|-.|...+.+.
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSC
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCC
Confidence 468999999999999999999988775
No 163
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=80.78 E-value=4.6 Score=37.45 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=39.5
Q ss_pred CCCceEEEEEeceEEEEEecCCCcEEE-EEEeCCCEEEeCCCCeeeeeeCC---CCcEEEEEEEc
Q 027870 121 HADEEIRYCLEGSGYFDVRDESDQWIR-IWIKAGDLIVLPAGIYHRFTLDT---SNYVKLMRLFV 181 (217)
Q Consensus 121 H~~dEiryileG~g~f~v~~~~d~wi~-i~v~~GDlIiIPaG~~H~F~~~~---~~~~~aiRlF~ 181 (217)
+....|..|++|+|.+...+.. . . ..+++||.++||++..=.+.... ...+.+.|-|.
T Consensus 377 ~~~~~illv~~G~g~i~~~~~~-~--~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~~~~~a~~ 438 (440)
T 1pmi_A 377 LNGPSIVIATNGKGTIQITGDD-S--TKQKIDTGYVFFVAPGSSIELTADSANQDQDFTTYRAFV 438 (440)
T ss_dssp CSSCEEEEEEESEEEEEETTCG-G--GCEEEETTCEEEECTTCCEEEEECSSCCSSCCEEEEEEC
T ss_pred CCCcEEEEEEeCeEEEEeCCcc-c--ceEEeccCCEEEEeCCCcEEEEEecccCCCcEEEEEEEe
Confidence 3467899999999998875320 1 1 68999999999999544455431 33466666554
No 164
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=79.51 E-value=5 Score=29.67 Aligned_cols=36 Identities=17% Similarity=0.350 Sum_probs=28.5
Q ss_pred EEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCC
Q 027870 146 IRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGE 183 (217)
Q Consensus 146 i~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~ 183 (217)
++-.+++||+++||+|-+=...+.. + +..+-|.+..
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~-~-le~v~F~tna 41 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS-D-LNMVGIGVNA 41 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS-S-EEEEEEEESC
T ss_pred hhceecCCcEEEECCCCceeEEecC-C-eEEEEEEecC
Confidence 4667999999999999888877775 3 7777776665
No 165
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=77.30 E-value=6.8 Score=34.27 Aligned_cols=63 Identities=25% Similarity=0.330 Sum_probs=46.8
Q ss_pred cccccCCCc-eEEEEE-eceEEEEEecCCCcEEEEEEeCCCEEEeCC--CCeeeeeeCCCCcEEEEEEEcC
Q 027870 116 YTEHIHADE-EIRYCL-EGSGYFDVRDESDQWIRIWIKAGDLIVLPA--GIYHRFTLDTSNYVKLMRLFVG 182 (217)
Q Consensus 116 ~~eH~H~~d-Eiryil-eG~g~f~v~~~~d~wi~i~v~~GDlIiIPa--G~~H~F~~~~~~~~~aiRlF~~ 182 (217)
|..|-|..- -|-|++ +|+.... |.-+. .-.+++||+-..=| |+.|.=...++..+..++|...
T Consensus 53 f~~HPHrg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQlWvn 119 (290)
T 1j1l_A 53 FPDHPHRGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWVN 119 (290)
T ss_dssp EEEEEEBSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEEEEECTTCEEEEEEECSSSCEEEEEEEEE
T ss_pred CCCCCCCCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEEEEEec
Confidence 799999865 589999 9998764 22222 57789999977766 5789765555677888888763
No 166
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=76.87 E-value=3.3 Score=38.63 Aligned_cols=46 Identities=20% Similarity=0.322 Sum_probs=35.8
Q ss_pred EEEEEeceEEEEEec-------------------------CCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 126 IRYCLEGSGYFDVRD-------------------------ESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 126 iryileG~g~f~v~~-------------------------~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
...++.|+=.|.+-. ..++++++.+++||+|+||+|-.|...+.++
T Consensus 256 w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWwH~V~nled 326 (447)
T 3kv4_A 256 WYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVD 326 (447)
T ss_dssp EEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCEEEEEESSC
T ss_pred eEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCeEEEecCCC
Confidence 456788887776631 1246789999999999999999999877654
No 167
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=76.53 E-value=2 Score=39.50 Aligned_cols=28 Identities=18% Similarity=0.320 Sum_probs=24.4
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
++++++.+++||+|+||+|-.|...+-+
T Consensus 241 ~~~~ev~l~pGEtlfIPsGWwH~V~nle 268 (392)
T 3pua_A 241 DKCYKCIVKQGQTLFIPSGWIYATLTPV 268 (392)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred cceEEEEECCCcEEeeCCCceEEEecCC
Confidence 4678999999999999999999876554
No 168
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=76.18 E-value=2.1 Score=39.09 Aligned_cols=28 Identities=21% Similarity=0.421 Sum_probs=24.5
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
++++++.+++||+|+||+|-.|...+-+
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~nle 241 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLTPV 241 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred CceEEEEECCCcEEEeCCCCeEEEecCC
Confidence 4678999999999999999999877644
No 169
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=76.08 E-value=1.8 Score=40.24 Aligned_cols=23 Identities=17% Similarity=0.287 Sum_probs=20.8
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeC
Q 027870 147 RIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 147 ~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
.+.++|||.|.||||+.|.+..+
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~G 289 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYISG 289 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEEE
T ss_pred eEecCCCCEEecCCCCccccCCC
Confidence 68899999999999999988655
No 170
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=74.32 E-value=2.5 Score=40.46 Aligned_cols=29 Identities=28% Similarity=0.438 Sum_probs=24.5
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
+.|+++.+++||+|+||+|-.|...+-++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleD 391 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVD 391 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEE
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCC
Confidence 45789999999999999999998765443
No 171
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=72.99 E-value=4 Score=38.12 Aligned_cols=29 Identities=31% Similarity=0.413 Sum_probs=25.2
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
++.+++.+++||+|+||+|=.|...+-++
T Consensus 263 ~~~~~v~l~pGE~LfIPsGWwH~V~nled 291 (451)
T 2yu1_A 263 SDCQRIELKQGYTFVIPSGWIHAVYTPTD 291 (451)
T ss_dssp SCCEEEEECTTCEEEECTTCEEEEECSSC
T ss_pred ccceEEEECCCcEEEeCCCceEEEecCCC
Confidence 35789999999999999999999877654
No 172
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=72.40 E-value=2.9 Score=39.36 Aligned_cols=56 Identities=20% Similarity=0.235 Sum_probs=39.9
Q ss_pred cccccCCCce--EEEEEeceEEEEEecC-------------------------CCcEEEEEEeCCCEEEeCCCCeeeeee
Q 027870 116 YTEHIHADEE--IRYCLEGSGYFDVRDE-------------------------SDQWIRIWIKAGDLIVLPAGIYHRFTL 168 (217)
Q Consensus 116 ~~eH~H~~dE--iryileG~g~f~v~~~-------------------------~d~wi~i~v~~GDlIiIPaG~~H~F~~ 168 (217)
-..|.....- ...++.|+=.|.+-.. .++++++.+++||+|+||+|-.|...+
T Consensus 279 T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWwH~V~n 358 (488)
T 3kv5_D 279 TDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWIHAVLT 358 (488)
T ss_dssp EEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCEEEEEE
T ss_pred CCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCceEEeeC
Confidence 3445554433 4567788877776522 235789999999999999999999776
Q ss_pred CCC
Q 027870 169 DTS 171 (217)
Q Consensus 169 ~~~ 171 (217)
-++
T Consensus 359 led 361 (488)
T 3kv5_D 359 SQD 361 (488)
T ss_dssp EEE
T ss_pred CCC
Confidence 543
No 173
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=71.31 E-value=3.3 Score=38.18 Aligned_cols=28 Identities=21% Similarity=0.426 Sum_probs=24.5
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
++++++.+++||.++||+|-.|...+-+
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nle 269 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQ 269 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEE
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCc
Confidence 4678999999999999999999977654
No 174
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=71.12 E-value=16 Score=27.20 Aligned_cols=46 Identities=11% Similarity=0.169 Sum_probs=37.4
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
..|+.=|++|+..+.+.+. +.|. ...+||-..||+|..-.....+.
T Consensus 41 ~~E~M~vvsG~~~V~lpg~-~ew~--~~~aGesF~Vpans~F~l~v~~~ 86 (94)
T 2oyz_A 41 APERMTVVKGALVVKRVGE-ADWT--TYSSGESFDVEGNSSFELQVKDA 86 (94)
T ss_dssp SCEEEEEEESEEEEEETTC-SSCE--EEETTCEEEECSSEEEEEEESSC
T ss_pred CeEEEEEEEeEEEEEcCCC-CcCE--EECCCCEEEECCCCEEEEEEccc
Confidence 5789999999999999864 4564 45699999999999877766543
No 175
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=70.74 E-value=4.6 Score=37.26 Aligned_cols=37 Identities=30% Similarity=0.328 Sum_probs=28.1
Q ss_pred EEEEEeCCCEEEeCCCCeeeeeeCCCCcEE-EEEEEcCC
Q 027870 146 IRIWIKAGDLIVLPAGIYHRFTLDTSNYVK-LMRLFVGE 183 (217)
Q Consensus 146 i~i~v~~GDlIiIPaG~~H~F~~~~~~~~~-aiRlF~~~ 183 (217)
+.+.-++||.|+||||-+|-..+-.+ .|+ +.-|++.+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~-~i~va~df~spe 330 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHS-CIQVTEDFVSPE 330 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSE-EEEEEEEECCGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccc-hhhHhhhhcChh
Confidence 47888899999999999999988774 444 44454444
No 176
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=69.44 E-value=5.7 Score=35.80 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=29.9
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceE
Q 027870 145 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWT 187 (217)
Q Consensus 145 wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~ 187 (217)
++++.=+|||+|++++|++||.-..+ +-..+-.-..++-|.
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G--~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATG--WCNNIAWNVGPLTAY 318 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESS--SEEEEEEEEESCTTG
T ss_pred eEEEEECCCCEEEECCCceEEEEecc--eeeEEEEEeCCCcHH
Confidence 55778889999999999999966554 244455555566554
No 177
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=67.41 E-value=7.5 Score=34.41 Aligned_cols=30 Identities=27% Similarity=0.451 Sum_probs=25.7
Q ss_pred cCCCceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeee
Q 027870 120 IHADEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR 165 (217)
Q Consensus 120 ~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~ 165 (217)
.|+..|=.|||+|.. .+|+..+-|+|+.|-
T Consensus 235 iHdy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HG 264 (303)
T 2qdr_A 235 IQPYNEEGYCLTGYC----------------DVGDYRIVKDHYWYC 264 (303)
T ss_dssp EECSCEEEEEEEEEE----------------EETTEEEETTEEEEE
T ss_pred eeccceeEEEEeeec----------------cCceeeEcCCCCccC
Confidence 588888889999965 359999999999997
No 178
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=66.22 E-value=17 Score=26.02 Aligned_cols=57 Identities=16% Similarity=0.044 Sum_probs=36.7
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiIP---aG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+++ .+.-.+.+||++-.. .+.++.+++.......++++
T Consensus 46 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~~~~i 106 (149)
T 2pqq_A 46 GDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIGELSLFDPGPRTATGTALTEVKLLAL 106 (149)
T ss_dssp ECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEESGGGGTSCEECSSEEEESSCEEEEEE
T ss_pred CCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEechHHhcCCCCcceEEEEccceEEEEE
Confidence 4679999999999887765554 455578999987322 24444444443344555555
No 179
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=58.78 E-value=11 Score=36.02 Aligned_cols=43 Identities=23% Similarity=0.222 Sum_probs=32.1
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEe
Q 027870 145 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAY 189 (217)
Q Consensus 145 wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~~ 189 (217)
++++.=++||+|++++|++||.-..+- -..+-.-...+-|.++
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~--~~n~awN~a~~~~~q~ 379 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGW--CNNIAWNVGPLTACQY 379 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSS--EEEEEEEECCSSHHHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecce--eeeeEEEeccCchHHH
Confidence 456777899999999999999776653 3445666666777664
No 180
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=57.49 E-value=8.2 Score=36.73 Aligned_cols=41 Identities=22% Similarity=0.184 Sum_probs=28.2
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceE
Q 027870 145 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWT 187 (217)
Q Consensus 145 wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~ 187 (217)
++++.=+|||+|++++|++||.-+.+- -..+-.-..++-|.
T Consensus 312 vyr~iQkPGdfVit~PgtyH~Vqs~Gf--~~niaWNvap~t~~ 352 (510)
T 4ask_A 312 VYRFVQRPGDLVWINAGTVHWVQATGW--CNNIAWNVGPLTAY 352 (510)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSS--EEEEEEEECBSSHH
T ss_pred eEEEEECCCCEEEECCCceEEEEecCe--eeeeEEEecCCCHH
Confidence 446777899999999999999776543 23344444545443
No 181
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=57.34 E-value=20 Score=25.46 Aligned_cols=57 Identities=9% Similarity=0.060 Sum_probs=32.8
Q ss_pred CceEEEEEeceEEEEEecCCCc-EE---EEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WI---RIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi---~i~v~~GDlIiIP---aG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+++ .+ --.+.+||++=.. .+.++.+++.......++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG~~~~~~~~~~~~~~~a~~~~~~~~i 110 (142)
T 3mdp_A 47 ADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFGVSSLIKPYHYTSSARATKPVRVVDI 110 (142)
T ss_dssp CCEEEEEEESCEEEECC---------CEEEEECTTCEECGGGSSTTCBCSSEEEESSCEEEEEE
T ss_pred CCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEechHHHcCCCCceEEEEECCcEEEEEE
Confidence 5789999999999887655553 33 4568999987433 34555444433333444444
No 182
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=57.03 E-value=23 Score=26.94 Aligned_cols=57 Identities=9% Similarity=0.011 Sum_probs=37.6
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEE-eC---CCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIV-LP---AGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIi-IP---aG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+|+ .+.-.+.+||++- +. .+.++.+++.......++++
T Consensus 48 ~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a~~~~~v~~i 109 (194)
T 3dn7_A 48 CRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLSDYMAFQKQQPADFYIQSVENCELLSI 109 (194)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEECCHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred eeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEeehHHHhcCCCCceEEEEECCEEEEEE
Confidence 4789999999999887666554 5555689999985 32 24455454444334555554
No 183
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=56.83 E-value=9.5 Score=33.77 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=27.2
Q ss_pred ccCC-CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCee
Q 027870 119 HIHA-DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYH 164 (217)
Q Consensus 119 H~H~-~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H 164 (217)
=.|. +-| +||++|+..+ + .-.+.+|..+.+|+|+.-
T Consensus 107 Gi~~ad~E-~fVL~G~i~~--G-------~~~l~~h~Y~f~PaGV~~ 143 (303)
T 2qdr_A 107 GIFTADLE-IFVIKGAIQL--G-------EWQLNKHSYSFIPAGVRI 143 (303)
T ss_dssp BEESSCEE-EEEEESEEEE--T-------TEEECTTEEEEECTTCCB
T ss_pred cccccceE-EEEEEeEEEe--C-------CEEecCCceEEecCCCcc
Confidence 3444 556 9999888764 3 257889999999999855
No 184
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=55.15 E-value=46 Score=25.77 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=26.3
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEe
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL 158 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiI 158 (217)
.+.+++|++|....... .+|+ .+--.+.+||++-.
T Consensus 45 ~~~~y~i~~G~v~~~~~-~~G~~~~~~~~~~G~~~G~ 80 (220)
T 2fmy_A 45 RNLVFLVKSGRVRVYLA-YEDKEFTLAILEAGDIFCT 80 (220)
T ss_dssp SCEEEEEEESEEEEEEE-CSSCEEEEEEEETTCEEES
T ss_pred CCeEEEEEecEEEEEEC-CCCCEEEEEEcCCCCEeCC
Confidence 46789999999988543 4444 55567899999866
No 185
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=55.01 E-value=41 Score=25.89 Aligned_cols=57 Identities=11% Similarity=0.049 Sum_probs=36.6
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEe-----CCCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL-----PAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiI-----PaG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++.+ -.+.++.+++.......++++
T Consensus 44 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a~~~~~~~~i 106 (220)
T 3dv8_A 44 CTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEAEKDTDLWII 106 (220)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEESSCEEEEEE
T ss_pred cceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEEeeeeEEEEE
Confidence 5689999999999888766665 44556889999632 234444444433334455554
No 186
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=54.25 E-value=49 Score=27.67 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=38.4
Q ss_pred cccccCCCceEEEEEeceEEEEEecCCCcEEEEEEeC----CCE--EEeCCCCeeeeeeC
Q 027870 116 YTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWIKA----GDL--IVLPAGIYHRFTLD 169 (217)
Q Consensus 116 ~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v~~----GDl--IiIPaG~~H~F~~~ 169 (217)
-.+|.-..+||.+.-.|.+...+-..++..-++.+.+ |+. ++||+|+.......
T Consensus 93 S~wHRv~sdEiW~~h~G~p~~~li~~dg~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~ 152 (203)
T 1xe7_A 93 GKFHKNINRIIHILQRGKGQYVLVYPDGQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLL 152 (203)
T ss_dssp EEEEEESSCEEEEEEEECEEEEEECTTSCEEEEEESSCGGGTCBSEEEECTTCEEEEEEC
T ss_pred ccceeeCCCEEEEEEcCCccEEEEcCCCCEEEEEeCCCcccCcccEEEEcCCEEEEeEec
Confidence 3444446899999999977665555566666666654 443 89999998877654
No 187
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=52.60 E-value=19 Score=29.96 Aligned_cols=55 Identities=15% Similarity=0.082 Sum_probs=36.5
Q ss_pred CCCceEEEEEeceEEEEEe-cCCCcEEEEEEeCCCEEEeCCCCee---eeeeCCCCcEEEEEEE
Q 027870 121 HADEEIRYCLEGSGYFDVR-DESDQWIRIWIKAGDLIVLPAGIYH---RFTLDTSNYVKLMRLF 180 (217)
Q Consensus 121 H~~dEiryileG~g~f~v~-~~~d~wi~i~v~~GDlIiIPaG~~H---~F~~~~~~~~~aiRlF 180 (217)
+..--+.|+++|...+.+. ++ .+.+++||.+++-....- ....+....+..|+++
T Consensus 138 ~~~~~~v~~l~G~~~v~~~~~~-----~~~L~~~d~l~~~~~~~~~~~~~~~~g~~~~~~i~l~ 196 (200)
T 1yll_A 138 TASTLLLFAQQDGVAISLQGQP-----RGQLAAHDCLCAEGLQGLQHWRLTAHEPAWVCAVELD 196 (200)
T ss_dssp CCSEEEEEESSSCEEEEETTEE-----EEEECTTCEEEEESCCSCEEEEEEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEccCcEEEEcCCCc-----eeecCCCCEEEEeCCCccceeEeccCCceEEEEEEEe
Confidence 3456789999999888775 23 688999999998554322 3333444444555554
No 188
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=52.27 E-value=36 Score=26.03 Aligned_cols=57 Identities=14% Similarity=-0.003 Sum_probs=37.0
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEe--CCCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL--PAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiI--PaG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++=. -.+.++.+++.......++++
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge~~~~~~~~~~~~~A~~~~~v~~i 76 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGEEALEGKAYRYTAEAMTEAVVQGL 76 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECGGGGTCSBCSSEEEESSSEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEechhhhCCCCceeEEEECCcEEEEEE
Confidence 4678999999999887665554 55567899998743 123445455444444555555
No 189
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=51.66 E-value=53 Score=24.11 Aligned_cols=56 Identities=9% Similarity=-0.168 Sum_probs=34.2
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiI---PaG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|...... +.+|+ .+--.+.+||++=- -.|.++.+++.......++++
T Consensus 79 ~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~fGe~~~~~~~~~~~~v~A~~~~~~~~i 138 (161)
T 3idb_B 79 GDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSFGELALMYNTPRAATITATSPGALWGL 138 (161)
T ss_dssp CCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEECGGGGTCCCCCSSEEEESSSEEEEEE
T ss_pred CcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEechHHHHcCCCcccEEEECCCeEEEEE
Confidence 5689999999999888 44554 44456899997632 224444444433333444443
No 190
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=51.28 E-value=27 Score=26.50 Aligned_cols=44 Identities=25% Similarity=0.361 Sum_probs=35.9
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeC
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
..|+.=|++|+..+.+.+. +.|. ...+|+-..||+|..-.....
T Consensus 54 ~~E~MevvsG~l~V~LpG~-~eW~--~~~aGesF~VpanssF~lkv~ 97 (106)
T 3eo6_A 54 VAETIRVLSGMAYYHAEGA-NDVQ--ELHAGDSMVIPANQSYRLEVM 97 (106)
T ss_dssp SCEEEEEEEEEEEEECTTC-SSCE--EEETTCEEEECSSSCEEEEEE
T ss_pred CcEEEEEEEeEEEEECCCC-ccCE--EECCCCEEEECCCCcEEEEEC
Confidence 5789999999999999864 4674 456999999999988776654
No 191
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=51.11 E-value=50 Score=25.68 Aligned_cols=34 Identities=9% Similarity=0.251 Sum_probs=25.6
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIV 157 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIi 157 (217)
.+.+++|++|....... .+|+ .+--.+.+||++-
T Consensus 41 ~~~~y~i~~G~v~~~~~-~~G~~~~~~~~~~G~~fG 75 (222)
T 1ft9_A 41 ENGVFVVVDGRLRVYLV-GEEREISLFYLTSGDMFC 75 (222)
T ss_dssp CCCEEEEEESEEEEEEE-ETTEEEEEEEEETTCEEE
T ss_pred CCeEEEEEecEEEEEEC-CCCCEEEEEEcCCCCEec
Confidence 46789999999988633 4444 5556789999987
No 192
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=50.65 E-value=2.2 Score=32.12 Aligned_cols=30 Identities=23% Similarity=0.426 Sum_probs=24.0
Q ss_pred EEEEec--eEEEEEecCCCcEEEEEEeCCCEEEeCC
Q 027870 127 RYCLEG--SGYFDVRDESDQWIRIWIKAGDLIVLPA 160 (217)
Q Consensus 127 ryileG--~g~f~v~~~~d~wi~i~v~~GDlIiIPa 160 (217)
-|++.| ||...++|.. ...+++||+|+|=+
T Consensus 32 TYvI~GerSG~I~lNGAA----Arl~~~GD~vII~a 63 (97)
T 1uhe_A 32 TYVILGKKRGEICVNGAA----ARKVAIGDVVIILA 63 (97)
T ss_dssp EECEEECSTTCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEeeccCCeEEEchHH----HccCCCCCEEEEEE
Confidence 578888 6889999874 56789999999743
No 193
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=50.34 E-value=46 Score=25.79 Aligned_cols=35 Identities=14% Similarity=0.343 Sum_probs=27.6
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIV 157 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIi 157 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 52 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 52 AGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 4789999999999887666655 4556689999974
No 194
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=49.21 E-value=59 Score=24.82 Aligned_cols=46 Identities=15% Similarity=0.198 Sum_probs=37.6
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
..|+.=|++|+....+.+. +.|. ...+|+-..||++..-.....+.
T Consensus 57 ~~E~MevvsG~l~V~Lpg~-~eW~--~~~aGesF~VpanssF~lkv~~~ 102 (111)
T 3hqx_A 57 VPERMEIISGECRVKIADS-TESE--LFRAGQSFYVPGNSLFKIETDEV 102 (111)
T ss_dssp SCEEEEEEESEEEEEETTC-SSCE--EEETTCEEEECTTCEEEEECSSC
T ss_pred CcEEEEEEEeEEEEEcCCc-ccCE--EeCCCCEEEECCCCcEEEEECcc
Confidence 4688999999999999864 4674 45699999999999888776653
No 195
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=47.50 E-value=24 Score=29.81 Aligned_cols=46 Identities=7% Similarity=0.112 Sum_probs=33.7
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCCC---CcEEEEEEEcCCCceEE
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDTS---NYVKLMRLFVGEPVWTA 188 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~~---~~~~aiRlF~~~~gW~~ 188 (217)
..++.+.+++||+++.-..+.|+-..... .....+++......|.+
T Consensus 213 ~~~v~~~~~aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~~~~y~~ 261 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASADCHYID 261 (308)
T ss_dssp SCCEEECBCTTCEEEECTTCCEEECCBCSSSCEEEEEEEEEETTCEECC
T ss_pred CCeEEccCCCccEEEECCCccccCCCCCCCCceEEEEEEEECCCceEcc
Confidence 46789999999999999999999875432 23445666666555554
No 196
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=46.83 E-value=1e+02 Score=25.02 Aligned_cols=55 Identities=9% Similarity=0.061 Sum_probs=40.4
Q ss_pred CccccccCCCceEEEEEeceE-EEEEecCCCcEEEEEEe----CCC---EEEeCCCCeeeeee
Q 027870 114 NFYTEHIHADEEIRYCLEGSG-YFDVRDESDQWIRIWIK----AGD---LIVLPAGIYHRFTL 168 (217)
Q Consensus 114 ~f~~eH~H~~dEiryileG~g-~f~v~~~~d~wi~i~v~----~GD---lIiIPaG~~H~F~~ 168 (217)
.+-.+|.-..+|+.+.-.|.. .+.+-+.+++..++.+. +|+ -++||+|+......
T Consensus 64 ~~S~~HRv~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~ 126 (172)
T 3loi_A 64 QPDPFHRVKSDETFVHNLGGSMKIHMIHPDGSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV 126 (172)
T ss_dssp CCEEEEECSSEEEEEEEEESCEEEEEECTTSCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE
T ss_pred CCccCEEecCCEEEEEEcCCCEEEEEEcCCCceEEEEeCCCcccCCcceEEEECCCEEEEEEe
Confidence 344455556899999999976 56666567777777775 577 58999999776666
No 197
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=45.90 E-value=93 Score=26.99 Aligned_cols=68 Identities=16% Similarity=0.126 Sum_probs=46.4
Q ss_pred HcCCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCCcEEEEEE--eC--------CCEEEe
Q 027870 89 ARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESDQWIRIWI--KA--------GDLIVL 158 (217)
Q Consensus 89 e~Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d~wi~i~v--~~--------GDlIiI 158 (217)
.-.|.+.+++.|.++. -+...+-..|-....|.|.+.+.+++. +..+ .. .|.+.|
T Consensus 25 ~~~y~~f~~~~L~~Ge----------~~~~~~~~~E~~iv~l~G~~~V~~~g~-----~~~~~g~R~svF~~~~p~~lYv 89 (270)
T 2qjv_A 25 GWEYVGFDVWQLXAGE----------SITLPSDERERCLVLVAGLASVXAADS-----FFYRIGQRMSPFERIPAYSVYL 89 (270)
T ss_dssp TSSSCEEEEEEECTTC----------EEEECCSSEEEEEEEEESCEEEEETTE-----EEEEECCCSSGGGCSCCCEEEE
T ss_pred CcEEeEEEEEEecCCC----------EEEecCCCcEEEEEEecceEEEEECCE-----EEeccccccccccCCCCcEEEE
Confidence 3456667778877653 123333344566778899999999865 4543 33 599999
Q ss_pred CCCCeeeeeeCCC
Q 027870 159 PAGIYHRFTLDTS 171 (217)
Q Consensus 159 PaG~~H~F~~~~~ 171 (217)
|.|..=.|++...
T Consensus 90 p~g~~v~i~a~~~ 102 (270)
T 2qjv_A 90 PHHTEAXVTAETD 102 (270)
T ss_dssp CSSCCEEEEESSS
T ss_pred CCCCEEEEEecCC
Confidence 9999777877664
No 198
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=44.66 E-value=75 Score=24.06 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=27.3
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIV 157 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIi 157 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++=
T Consensus 31 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 31 CETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 4679999999999887766554 4556789999974
No 199
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=44.01 E-value=51 Score=25.08 Aligned_cols=35 Identities=29% Similarity=0.474 Sum_probs=27.8
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIV 157 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIi 157 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 37 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 37 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIG 72 (210)
T ss_dssp CCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEES
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEee
Confidence 5679999999999887766665 4555689999984
No 200
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=43.26 E-value=46 Score=25.48 Aligned_cols=57 Identities=11% Similarity=-0.011 Sum_probs=36.6
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiIP---aG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++-.. .|.++.+++.......++++
T Consensus 40 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a~~~~~v~~i 100 (216)
T 4ev0_A 40 GQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVAVEDTELLAL 100 (216)
T ss_dssp CCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEESSSEEEEEE
T ss_pred CCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEEcCCEEEEEE
Confidence 5789999999999888766655 455668999987421 23344444433333455544
No 201
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=42.72 E-value=21 Score=29.76 Aligned_cols=41 Identities=12% Similarity=0.255 Sum_probs=31.3
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCC---CCcEEEEEEEcCC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDT---SNYVKLMRLFVGE 183 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~---~~~~~aiRlF~~~ 183 (217)
..++.+.+++||+++.-..+.|+-.... ......+++..+.
T Consensus 225 ~~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~~~ 268 (291)
T 2opw_A 225 SLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEAS 268 (291)
T ss_dssp GGCEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEECT
T ss_pred CCeeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEcCC
Confidence 3588999999999999999999976432 3445667776654
No 202
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=42.23 E-value=51 Score=25.79 Aligned_cols=34 Identities=9% Similarity=0.053 Sum_probs=27.2
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLI 156 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlI 156 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 52 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 52 AQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 5689999999999888766655 455568999987
No 203
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=41.61 E-value=25 Score=29.16 Aligned_cols=40 Identities=15% Similarity=0.241 Sum_probs=30.6
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCCCC------cEEEEEEEcC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDTSN------YVKLMRLFVG 182 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~------~~~aiRlF~~ 182 (217)
..|+.+.+++||+++.-..+.|+-.....+ ....+|+...
T Consensus 208 ~~~v~~~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 208 EHLLHSPMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp SCEECCCCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred CceeecccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecC
Confidence 458899999999999999999998755433 2445566655
No 204
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=40.71 E-value=58 Score=25.26 Aligned_cols=57 Identities=9% Similarity=0.029 Sum_probs=35.9
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEeC---CCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP---AGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiIP---aG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++=.. .+.++.+++.......++++
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~~~~~v~~i 107 (227)
T 3d0s_A 47 GDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSM 107 (227)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEEcccEEEEEE
Confidence 4678999999999887766555 445578999987321 23444444333333555554
No 205
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=40.49 E-value=38 Score=30.90 Aligned_cols=54 Identities=11% Similarity=0.005 Sum_probs=28.8
Q ss_pred EEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEeCCCCCCcHHHH
Q 027870 145 WIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQEDHPARK 200 (217)
Q Consensus 145 wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~~~r~~d~~~~R~ 200 (217)
+.++.-++||+|++=+|.+|+--..+-+ .+...--..+-|.++.+.+....++.
T Consensus 304 v~r~vQ~pGEfViTfP~aYH~gfn~Gfn--~aEAvNFA~~~Wl~~g~~a~~C~C~~ 357 (373)
T 3opt_A 304 CNEIVHHEGEFMITYPYGYHAGFNYGYN--LAESVNFALEEWLPIGKKAGKCHCIS 357 (373)
T ss_dssp CEEEEECTTCEEEECTTCCEEEEESSSE--EEEEEEECCC----------------
T ss_pred eEEEEECCCCEEEECCCceEEEEecCcc--HHHHHccCcHHHHHhhccCccCcccC
Confidence 5588889999999999999997665544 34455556788999988765555553
No 206
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=40.44 E-value=47 Score=25.82 Aligned_cols=34 Identities=24% Similarity=0.115 Sum_probs=26.2
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLI 156 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlI 156 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 40 ~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 40 IEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp CCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 4578999999998877655555 455568999987
No 207
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=40.15 E-value=65 Score=24.65 Aligned_cols=34 Identities=15% Similarity=0.037 Sum_probs=27.2
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLI 156 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlI 156 (217)
.+.+++|++|.......+.+|+ .+.-.+.+||++
T Consensus 80 ~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 80 GDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 5689999999999888776665 445578999986
No 208
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=39.30 E-value=61 Score=25.59 Aligned_cols=37 Identities=11% Similarity=0.231 Sum_probs=26.2
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeC
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP 159 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIP 159 (217)
.+.+++|++|.......+.+|+-+.+..-+||++-..
T Consensus 36 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~G~~~Ge~ 72 (238)
T 2bgc_A 36 QEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMS 72 (238)
T ss_dssp CCEEEEEEESEEEEEEECTTSCEEEEEEEESSEEEES
T ss_pred CceEEEEEecEEEEEEECCCCCEEEEEEcCCCEecch
Confidence 4678999999999887666665333333399998544
No 209
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=38.65 E-value=63 Score=26.09 Aligned_cols=57 Identities=18% Similarity=0.222 Sum_probs=36.3
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEeCC---CC-eeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLPA---GI-YHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiIPa---G~-~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++=..+ +. ++.+++.......++++
T Consensus 87 ~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A~~~~~l~~i 148 (260)
T 3kcc_A 87 AETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEI 148 (260)
T ss_dssp CCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEESSCEEEEEE
T ss_pred CCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEECCCeEEEEE
Confidence 5689999999999887766655 4556689999984332 22 34344333333455554
No 210
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=38.52 E-value=16 Score=27.37 Aligned_cols=28 Identities=36% Similarity=0.698 Sum_probs=21.7
Q ss_pred EEEe---ceEEEEEecCCCcEEEEEEeCCCEEEeC
Q 027870 128 YCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLP 159 (217)
Q Consensus 128 yile---G~g~f~v~~~~d~wi~i~v~~GDlIiIP 159 (217)
|++. |||...+++.. ...+++||+|+|-
T Consensus 34 YvI~GerGSG~I~lNGAA----Arl~~~GD~vII~ 64 (96)
T 1vc3_B 34 YALPGERGSGVIGINGAA----AHLVKPGDLVILV 64 (96)
T ss_dssp ECEEECTTTTCEEEEGGG----GGTCCTTCEEEEE
T ss_pred EEEEccCCCCeEEEchHH----HccCCCCCEEEEE
Confidence 4554 57999999875 5678999999974
No 211
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=38.25 E-value=60 Score=25.53 Aligned_cols=64 Identities=13% Similarity=0.112 Sum_probs=39.4
Q ss_pred hHHHHHHHHHcCCCeeeeeeeCccCccChHHHhcCccccccC-CCceEEEEEeceEEEEEecCCC-cEEEEEEeCCCEEE
Q 027870 80 DEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIH-ADEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIV 157 (217)
Q Consensus 80 ~~~l~~l~~e~Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H-~~dEiryileG~g~f~v~~~~d-~wi~i~v~~GDlIi 157 (217)
++.++.|....+ ....++.++.. .+. .. ..+.+++|++|.......+.+| +.+--.+.+||++=
T Consensus 31 ~~~~~~l~~~~~---~~~~~~~~ge~---------i~~--~G~~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG 96 (232)
T 1zyb_A 31 HEDFTSILDKVK---LHFIKHKAGET---------IIK--SGNPCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIE 96 (232)
T ss_dssp HHHHHHHHHTSC---CEEEEECTTCE---------EEC--TTSBCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEEC
T ss_pred HHHHHHHHhhCC---cEEEEECCCCE---------EEC--CCCcccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeee
Confidence 667888865311 24455554421 111 22 3567999999999887654444 45556789999873
No 212
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=38.10 E-value=24 Score=29.30 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=34.3
Q ss_pred EEEEEeceEEEEEecC--CCcEEEEEEeCCCEEEeCCCCeeeeee
Q 027870 126 IRYCLEGSGYFDVRDE--SDQWIRIWIKAGDLIVLPAGIYHRFTL 168 (217)
Q Consensus 126 iryileG~g~f~v~~~--~d~wi~i~v~~GDlIiIPaG~~H~F~~ 168 (217)
+..=+-++..|.++.. ++..+.+.+..||+++.+.+..+|+-.
T Consensus 134 ~svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~H~ 178 (211)
T 3i3q_A 134 VSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHG 178 (211)
T ss_dssp EEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCCEE
T ss_pred EEEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceEec
Confidence 3455778999999864 366889999999999999988776543
No 213
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=37.48 E-value=77 Score=24.59 Aligned_cols=35 Identities=11% Similarity=-0.030 Sum_probs=26.3
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIV 157 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIi 157 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++=
T Consensus 47 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 47 GEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp TTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred CCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 5679999999999887766554 5556789999874
No 214
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=36.03 E-value=27 Score=25.16 Aligned_cols=34 Identities=12% Similarity=0.008 Sum_probs=24.0
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLI 156 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlI 156 (217)
.+.+++|++|.......+.+++ .+.-.+.+||++
T Consensus 53 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 53 AHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred cceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 4679999999999876654443 445578899987
No 215
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=35.61 E-value=55 Score=25.00 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=36.3
Q ss_pred ceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEEeC--CCCeeeeeeCCCCcEEEEEE
Q 027870 124 EEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIVLP--AGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 124 dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIiIP--aG~~H~F~~~~~~~~~aiRl 179 (217)
+.+++|++|.......+.+|+ .+--.+.+||++-.+ .|.++.+++..-....++++
T Consensus 26 ~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A~~~~~v~~i 84 (202)
T 2zcw_A 26 DRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEAATDVRLEPL 84 (202)
T ss_dssp CCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEESSCEEEEEC
T ss_pred CeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEEcccEEEEEE
Confidence 678999999999877655554 555668999987431 13444444433344566666
No 216
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=35.41 E-value=17 Score=24.38 Aligned_cols=12 Identities=17% Similarity=0.562 Sum_probs=8.0
Q ss_pred EEEEeCCCEEEe
Q 027870 147 RIWIKAGDLIVL 158 (217)
Q Consensus 147 ~i~v~~GDlIiI 158 (217)
.+.+++||+|.|
T Consensus 22 ELs~~~Gd~i~v 33 (65)
T 2lj0_A 22 ELELRDGDIVDV 33 (65)
T ss_dssp BCCBCTTCEEEE
T ss_pred CcCCCCCCEEEE
Confidence 466677777665
No 217
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=35.09 E-value=71 Score=25.35 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=27.1
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLI 156 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlI 156 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++
T Consensus 61 ~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~ 95 (243)
T 3la7_A 61 AERVYFLLKGAVKLSRVYEAGEEITVALLRENSVF 95 (243)
T ss_dssp CCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEE
T ss_pred CceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEE
Confidence 4689999999999887766655 556668999987
No 218
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=34.92 E-value=62 Score=26.96 Aligned_cols=57 Identities=11% Similarity=-0.112 Sum_probs=36.7
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiI---PaG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+++.+...+.+||++=- =.+.++.++........++++
T Consensus 54 ~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~fGe~~l~~~~~~~~~v~A~~~~~~~~i 113 (333)
T 4ava_A 54 AVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTG 113 (333)
T ss_dssp CCCEEEEEECCEEEEEECTTCCEEEEEECTTCEESHHHHHHTCBCSSEEEESSCEEEEEE
T ss_pred CCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEeeHHHhcCCCCceEEEEEecCEEEEEE
Confidence 467899999999988877766666677899998721 123444444433333444444
No 219
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=33.89 E-value=63 Score=24.72 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=23.9
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLI 156 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlI 156 (217)
.+.+++|++|...... .+|+ +...+.+||++
T Consensus 112 ~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 112 GDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp CSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred CcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 4679999999998776 3455 45678999986
No 220
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=33.30 E-value=77 Score=25.13 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=27.1
Q ss_pred CceEEEEEeceEEEEEecCCCc-EEEEEEeCCCEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ-WIRIWIKAGDLIV 157 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~-wi~i~v~~GDlIi 157 (217)
.+.+++|++|.......+.+|+ .+--.+.+||++-
T Consensus 50 ~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G 85 (250)
T 3e6c_C 50 ITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIG 85 (250)
T ss_dssp CCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEEC
T ss_pred CCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEe
Confidence 4678999999999887766655 4555689999974
No 221
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=32.89 E-value=1.2e+02 Score=27.77 Aligned_cols=40 Identities=10% Similarity=0.049 Sum_probs=33.2
Q ss_pred EEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeee
Q 027870 127 RYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFT 167 (217)
Q Consensus 127 ryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~ 167 (217)
+.|++|.....-++.++- ....++++|-.-|-|-++|.|+
T Consensus 358 Y~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE
T ss_pred EEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc
Confidence 446788877777755444 8899999999999999999999
No 222
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=30.61 E-value=97 Score=22.47 Aligned_cols=31 Identities=13% Similarity=0.193 Sum_probs=23.3
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIV 157 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIi 157 (217)
.+.+++|++|......+ ++. ...+.+||++=
T Consensus 79 ~~~~y~i~~G~v~~~~~---~~~-~~~~~~G~~fG 109 (154)
T 3pna_A 79 GDNFYVIDQGEMDVYVN---NEW-ATSVGEGGSFG 109 (154)
T ss_dssp CCEEEEEEESCEEEEET---TEE-EEEECTTCEEC
T ss_pred CCeEEEEEecEEEEEEC---CEE-EEEecCCCEee
Confidence 57899999999998763 333 34589999863
No 223
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=29.43 E-value=62 Score=25.19 Aligned_cols=85 Identities=14% Similarity=0.119 Sum_probs=45.1
Q ss_pred hHHHHHHHHHcCCCeeeeeeeCccCccChHHHhcCccccccCCCceEEEEEeceEEEEEecCCC-cEEEEEEeCCCEEEe
Q 027870 80 DEELQKIREARGYSYMDLLDLCPEKVTNYEEKLKNFYTEHIHADEEIRYCLEGSGYFDVRDESD-QWIRIWIKAGDLIVL 158 (217)
Q Consensus 80 ~~~l~~l~~e~Gy~~~Dvi~i~p~~~p~y~~k~~~f~~eH~H~~dEiryileG~g~f~v~~~~d-~wi~i~v~~GDlIiI 158 (217)
++.++.|... ....++.++.. .+.+- -..+.+++|++|.......+.+| +.+--.+.+||++=.
T Consensus 23 ~~~~~~l~~~-----~~~~~~~~g~~---------i~~~g-~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~ 87 (232)
T 2gau_A 23 EEERELLDKE-----IQPFPCKKAST---------VFSEG-DIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFFGM 87 (232)
T ss_dssp HHHHHHHHHH-----CEEEEECTTCE---------EECTT-CCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEESH
T ss_pred HHHHHHHHhh-----CeEEEECCCCE---------EEeCC-CCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEeee
Confidence 5677777652 34555555421 12211 12467999999999887655444 355567899998732
Q ss_pred C---CCCeeeeeeCCCCcEEEEEE
Q 027870 159 P---AGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 159 P---aG~~H~F~~~~~~~~~aiRl 179 (217)
. .+.++.+++.......++++
T Consensus 88 ~~~~~~~~~~~~~~A~~~~~v~~i 111 (232)
T 2gau_A 88 RPYFAEETCSSTAIAVENSKVLAI 111 (232)
T ss_dssp HHHHHTSCCSSEEEESSCEEEEEE
T ss_pred ehhhCCCCcceEEEEecceEEEEE
Confidence 2 13344444333333455544
No 224
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=29.28 E-value=30 Score=30.87 Aligned_cols=40 Identities=10% Similarity=0.131 Sum_probs=33.5
Q ss_pred EEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeee
Q 027870 126 IRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHR 165 (217)
Q Consensus 126 iryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~ 165 (217)
+..=|-+...|.++..++..+.+.+.+||+++.+....+.
T Consensus 226 ~slSLG~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~ 265 (345)
T 3tht_A 226 VSLSLGSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYL 265 (345)
T ss_dssp EEEEESSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHT
T ss_pred EEEECCCceeEEEccCCCceEEEEcCCCcEEEEChHHhhc
Confidence 3444778999999987788999999999999999987743
No 225
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=28.68 E-value=39 Score=28.43 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=24.1
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDT 170 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~ 170 (217)
..++.+.+++||+++.-..+.|+-....
T Consensus 217 ~~~v~~~~~aGd~v~f~~~l~H~s~~N~ 244 (313)
T 2fct_A 217 ASAVPMQMKAGQFIIFWSTLMHASYPHS 244 (313)
T ss_dssp GGCEEECBCTTEEEEEETTSEEEECCBC
T ss_pred CceeEeeeCCceEEEEeCCceeeCCCCC
Confidence 3578999999999999999999976544
No 226
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=28.62 E-value=7.4 Score=29.50 Aligned_cols=30 Identities=13% Similarity=0.320 Sum_probs=22.9
Q ss_pred EEEEe--ceEEEEEecCCCcEEEEEEeCCCEEEeCC
Q 027870 127 RYCLE--GSGYFDVRDESDQWIRIWIKAGDLIVLPA 160 (217)
Q Consensus 127 ryile--G~g~f~v~~~~d~wi~i~v~~GDlIiIPa 160 (217)
-|++. |+|...++|.. ...+++||.|+|-+
T Consensus 33 TYvI~GeGSG~I~lNGAA----Arl~~~GD~vII~a 64 (102)
T 3plx_B 33 TYTIATQEEGVVCLNGAA----ARLAEVGDKVIIMS 64 (102)
T ss_dssp EECEEESSTTCEEEEGGG----GGGCCTTCEEEEEE
T ss_pred EEEEEcCCCCEEEeCcHH----HhccCCCCEEEEEE
Confidence 35555 46889999875 56789999999854
No 227
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=28.54 E-value=95 Score=21.86 Aligned_cols=53 Identities=8% Similarity=0.018 Sum_probs=31.1
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeC---CCCeeeeee-CCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLP---AGIYHRFTL-DTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIP---aG~~H~F~~-~~~~~~~aiRl 179 (217)
.+.+++|++|...... .+++. ..+.+||++=.- .+.++.+++ .......++++
T Consensus 58 ~~~~y~i~~G~v~~~~--~~g~~--~~l~~G~~fG~~~~~~~~~~~~~~~~a~~~~~~~~i 114 (134)
T 2d93_A 58 LDSWYVILNGTVEISH--PDGKV--ENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQFVCI 114 (134)
T ss_dssp ECEEEECCBSCEEEEC--SSSCE--EEECTTCEESCCSSSCCEECCSEEEESSSSEEEEEE
T ss_pred CCeEEEEEeCEEEEEc--CCCcE--EEecCCCccChhHhcCCCcceeEEEEEecceEEEEE
Confidence 3568999999998764 34443 558899986322 234444444 33344454444
No 228
>2qfe_A Calpain-7; C2-like domain, hydrolase, nuclear protein, protease, thiol protease; 1.45A {Homo sapiens}
Probab=28.44 E-value=36 Score=26.58 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=24.2
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCC
Q 027870 147 RIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEP 184 (217)
Q Consensus 147 ~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~ 184 (217)
+..+.||.++||| ..|..+.+..|. ||+|...+
T Consensus 109 ~~~L~pG~YvIVP----STf~P~~eg~F~-LrVfs~~~ 141 (148)
T 2qfe_A 109 LENIPSGIFNIIP----STFLPKQEGPFF-LDFNSIIP 141 (148)
T ss_dssp EEEECSEEEEEEE----EESSTTCCEEEE-EEEEESSC
T ss_pred EEEcCCCCEEEEe----ccCCCCCccceE-EEEEeCCC
Confidence 5778899999987 456666655554 79998865
No 229
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=28.34 E-value=73 Score=28.83 Aligned_cols=48 Identities=23% Similarity=0.263 Sum_probs=35.5
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEeCCCC
Q 027870 144 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYNRPQ 193 (217)
Q Consensus 144 ~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~~~r~~ 193 (217)
...++.-++||+|++-+|.+|+--..+-+. +....-..+.|+++.+.+
T Consensus 260 pv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~--aEAvNFA~~~Wl~~g~~A 307 (354)
T 3dxt_A 260 PFNRITQEAGEFMVTFPYGYHAGFNHGFNC--AEAINFATPRWIDYGKMA 307 (354)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEE--EEEEEECCGGGHHHHHHC
T ss_pred ceEEEEeCCCcEEEECCCceEEEeeccccH--hHhhccCcHHHHHhhhhc
Confidence 356888999999999999999976665443 444444567799875543
No 230
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=27.54 E-value=9.4 Score=29.44 Aligned_cols=29 Identities=14% Similarity=0.257 Sum_probs=22.2
Q ss_pred EEEEe---ceEEEEEecCCCcEEEEEEeCCCEEEeC
Q 027870 127 RYCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLP 159 (217)
Q Consensus 127 ryile---G~g~f~v~~~~d~wi~i~v~~GDlIiIP 159 (217)
-|++. |+|...++|.. ...+++||.|||-
T Consensus 60 TYvI~GerGSg~I~lNGAA----Ar~~~~GD~vII~ 91 (114)
T 3oug_A 60 TYVIKGEPNSKTIALNGPA----ARRCEIGDQLFII 91 (114)
T ss_dssp EEEEEECTTSCCEEEEGGG----GGGCCTTCEEEEE
T ss_pred EEEEEccCCCCEEEeCCHH----HhccCCCCEEEEE
Confidence 35554 57899999875 5678999999884
No 231
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=27.39 E-value=34 Score=29.57 Aligned_cols=41 Identities=15% Similarity=0.092 Sum_probs=28.8
Q ss_pred CcEEEEEEeCCCEEEeCCCCeeeeeeCC--CCc---EEEEEEEcCC
Q 027870 143 DQWIRIWIKAGDLIVLPAGIYHRFTLDT--SNY---VKLMRLFVGE 183 (217)
Q Consensus 143 d~wi~i~v~~GDlIiIPaG~~H~F~~~~--~~~---~~aiRlF~~~ 183 (217)
..++.+.+++||+++.-..+.|.-.... .+. ...+++....
T Consensus 219 ~~~v~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R~a~~~~y~~~~ 264 (319)
T 3gja_A 219 SQAYPMVLKPGEAVIFWSNTMHASLPHTGSKTDYRMGFAARYVPTQ 264 (319)
T ss_dssp --CCBCCBCTTEEEEEETTSCEEECCCCSCTTCCEEEEEEEEEETT
T ss_pred CceeEeeECCCeEEEEcCCccccCCCCCCCCCCcEEEEEEEEECCC
Confidence 3577899999999999999999976554 332 3345655544
No 232
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=26.84 E-value=53 Score=24.49 Aligned_cols=48 Identities=15% Similarity=0.244 Sum_probs=28.3
Q ss_pred EEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEE-EEEcCCCceEEeCCC
Q 027870 135 YFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLM-RLFVGEPVWTAYNRP 192 (217)
Q Consensus 135 ~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~ai-RlF~~~~gW~~~~r~ 192 (217)
.+.++++ .+.|++||+|.|+. ..+...+.+..= -|..+..+++-+.+|
T Consensus 4 Ii~~gGk-----QykV~~Gd~i~vek-----l~~~~G~~v~~~~VLlv~~~~~~~iG~P 52 (103)
T 3r8s_R 4 VFQSGGK-----QHRVSEGQTVRLEK-----LDIATGETVEFAEVLMIANGEEVKIGVP 52 (103)
T ss_dssp EEECSSS-----EEEEETTCEEEESC-----CCSCTTCEEEECCEEEEESSSEEECSSS
T ss_pred EEEECCE-----EEEEeCCCEEEECC-----cCCCCCCEEEEeEEEEEecCCCEEECCc
Confidence 3556666 78999999999985 223333333321 233444456666666
No 233
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=26.40 E-value=1.3e+02 Score=24.13 Aligned_cols=34 Identities=21% Similarity=0.108 Sum_probs=26.0
Q ss_pred CceEEEEEeceEEEEEecCCC--cEEEEEEeCCCEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESD--QWIRIWIKAGDLI 156 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d--~wi~i~v~~GDlI 156 (217)
.+.+++|++|+........++ ......+.+||++
T Consensus 198 ~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 198 GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 467899999999987664443 3556678999987
No 234
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=25.92 E-value=71 Score=24.54 Aligned_cols=53 Identities=9% Similarity=0.160 Sum_probs=31.8
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiI---PaG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|....... +++ ...+.+||++=. =.|.++.+++.......++++
T Consensus 113 ~~~ly~I~~G~v~v~~~--~g~--~~~l~~G~~fGe~~~~~~~~~~~~v~a~~~~~l~~i 168 (202)
T 3bpz_A 113 GKKMYFIQHGVVSVLTK--GNK--EMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSL 168 (202)
T ss_dssp CCEEEEEEECEEEEECT--TSC--CEEEETTCEECHHHHHHCSBCSSEEEESSCEEEEEE
T ss_pred CCeEEEEeccEEEEEEC--CCe--EEEEcCCCEeccHHHhcCCCcccEEEEeeEEEEEEE
Confidence 46799999999987543 333 246899998722 124444444444444555544
No 235
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=24.55 E-value=1.7e+02 Score=24.78 Aligned_cols=43 Identities=9% Similarity=0.063 Sum_probs=28.8
Q ss_pred eEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 125 EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 125 EiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
-..|+++|++.+. +.++. ...+.+||++.+-.+..=.+++.++
T Consensus 204 ~~l~v~~G~v~v~--g~~~~--~~~l~~gd~~~l~~~~~l~l~a~~~ 246 (256)
T 2vec_A 204 AYLQSIHGKFHAL--THHEE--KAALTCGDGAFIRDEANITLVADSP 246 (256)
T ss_dssp EEEEEEESCEEEE--ETTEE--EEEECTTCEEEEESCSEEEEEESSS
T ss_pred EEEEEEECEEEEC--Ccccc--ceEECCCCEEEECCCCeEEEEeCCC
Confidence 4578889988764 31111 3568999999998776556666544
No 236
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=24.45 E-value=90 Score=28.45 Aligned_cols=45 Identities=16% Similarity=0.224 Sum_probs=33.4
Q ss_pred cEEEEEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEeC
Q 027870 144 QWIRIWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAYN 190 (217)
Q Consensus 144 ~wi~i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~~~ 190 (217)
.++++.-++||+|++=+|.+|+--..+-+.-.|+-| ..+-|.++.
T Consensus 278 pv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNF--A~~~Wl~~g 322 (381)
T 2ox0_A 278 PFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNF--ATRRWIEYG 322 (381)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEE--CCTTHHHHH
T ss_pred ceEEEEecCCCEEEECCCcEEEeecCcccHHHHhcc--CcHHHHHHh
Confidence 356888899999999999999976665554445444 566777654
No 237
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=24.15 E-value=1.5e+02 Score=24.10 Aligned_cols=57 Identities=9% Similarity=0.004 Sum_probs=35.5
Q ss_pred CceEEEEEeceEEEEEec-CCC-cEEEEEEeCCCEEEe---CCCCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRD-ESD-QWIRIWIKAGDLIVL---PAGIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~-~~d-~wi~i~v~~GDlIiI---PaG~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|+......+ .++ ..+.-.+.+||++=- =.|.++.+++.......++++
T Consensus 198 ~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~fGe~~ll~~~~~~~tv~a~~~~~l~~i 259 (299)
T 3shr_A 198 GDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWFGEKALQGEDVRTANVIAAEAVTCLVI 259 (299)
T ss_dssp ECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEECGGGGSSSEECSSEEEESSSEEEEEE
T ss_pred CCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEeChHHHhCCCCcceEEEECCCEEEEEE
Confidence 356889999999988875 334 355567899998731 124444444444444555544
No 238
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=23.30 E-value=1.4e+02 Score=26.30 Aligned_cols=42 Identities=17% Similarity=0.218 Sum_probs=33.4
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCe-eeeeeC
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY-HRFTLD 169 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~-H~F~~~ 169 (217)
.|-....+.|.|...+++. ...+.+.|.+.||.|.. -.|.+.
T Consensus 79 rE~~iV~lgG~~~V~vdg~-----~f~lg~~dalYVp~G~~~v~~as~ 121 (289)
T 1ywk_A 79 RELGVINIGGPGFIEIDGA-----KETMKKQDGYYIGKETKHVRFSSE 121 (289)
T ss_dssp EEEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEES
T ss_pred cEEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEec
Confidence 3445677899999999876 66888999999999977 567653
No 239
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=23.18 E-value=63 Score=24.05 Aligned_cols=21 Identities=5% Similarity=0.101 Sum_probs=16.7
Q ss_pred EEEEecCCCcEEEEEEeCCCEEEeCC
Q 027870 135 YFDVRDESDQWIRIWIKAGDLIVLPA 160 (217)
Q Consensus 135 ~f~v~~~~d~wi~i~v~~GDlIiIPa 160 (217)
.+.++++ .+.|++||+|.|+.
T Consensus 4 Ii~~gGk-----QykV~~Gd~i~vek 24 (101)
T 3v2d_V 4 IVKTGGK-----QYRVEPGLKLRVEK 24 (101)
T ss_dssp EEEETTE-----EEEECTTCEEEESC
T ss_pred EEEeCCE-----EEEEeCCCEEEECC
Confidence 3556666 78999999999984
No 240
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=23.12 E-value=1.7e+02 Score=25.59 Aligned_cols=57 Identities=18% Similarity=0.092 Sum_probs=37.7
Q ss_pred CceEEEEEeceEEEEEecCCCc---EEEEEEeCCCEEEeCC--CCeeeeeeCCCCcEEEEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQ---WIRIWIKAGDLIVLPA--GIYHRFTLDTSNYVKLMRL 179 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~---wi~i~v~~GDlIiIPa--G~~H~F~~~~~~~~~aiRl 179 (217)
.+.+++|++|.......+.+|+ .+-..+.+||++=-.+ |.++.+++.......++++
T Consensus 83 ~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe~~l~~~~~~~tv~A~~~~~l~~i 144 (469)
T 1o7f_A 83 GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGESILDNTPRHATIVTRESSELLRI 144 (469)
T ss_dssp CCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECGGGGGTCBCSSEEEESSSEEEEEE
T ss_pred CCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcchhhhCCCCccceEEEccceeEEEE
Confidence 4678999999999988766653 6667889999874433 3344444433334555554
No 241
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=23.07 E-value=2.3e+02 Score=23.68 Aligned_cols=38 Identities=8% Similarity=-0.011 Sum_probs=27.7
Q ss_pred eEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeeeeeCCC
Q 027870 125 EIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRFTLDTS 171 (217)
Q Consensus 125 EiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F~~~~~ 171 (217)
-..|+++|++.+ ++ ..+.+||++.+..+..=.+++.++
T Consensus 183 ~~~~v~~G~v~v--~g-------~~l~~gd~~~~~~~~~l~l~a~~~ 220 (242)
T 1tq5_A 183 VWIQVVKGNVTI--NG-------VKASTSDGLAIWDEQAISIHADSD 220 (242)
T ss_dssp EEEEEEESEEEE--TT-------EEEETTCEEEEESCSCEEEEESSS
T ss_pred EEEEEccCcEEE--CC-------EEeCCCCEEEECCCCeEEEEeCCC
Confidence 458899998865 32 358899999998776666666543
No 242
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=22.86 E-value=12 Score=29.75 Aligned_cols=29 Identities=31% Similarity=0.653 Sum_probs=22.6
Q ss_pred EEEe---ceEEEEEecCCCcEEEEEEeCCCEEEeCC
Q 027870 128 YCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLPA 160 (217)
Q Consensus 128 yile---G~g~f~v~~~~d~wi~i~v~~GDlIiIPa 160 (217)
|++. |||...+++.. ...+++||.|||-+
T Consensus 58 YvI~GerGSG~I~lNGAA----Arl~~~GD~vII~a 89 (139)
T 2c45_A 58 YAITGERGSGVIGINGAA----AHLVHPGDLVILIA 89 (139)
T ss_dssp CEEEECTTTTCEEEESST----TTTSCTTCEEEEEE
T ss_pred EEEEccCCCCEEEEchHH----HccCCCCCEEEEEE
Confidence 4554 57999999875 56789999999854
No 243
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=22.40 E-value=32 Score=22.00 Aligned_cols=12 Identities=8% Similarity=0.332 Sum_probs=7.9
Q ss_pred EEEEeCCCEEEe
Q 027870 147 RIWIKAGDLIVL 158 (217)
Q Consensus 147 ~i~v~~GDlIiI 158 (217)
.+.+++||+|.|
T Consensus 19 eLs~~~Gd~i~v 30 (62)
T 2fpe_A 19 ELELEVDDPLLV 30 (62)
T ss_dssp BCCBCTTCEEEE
T ss_pred cCcCCCCCEEEE
Confidence 355667777766
No 244
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=22.31 E-value=33 Score=26.17 Aligned_cols=27 Identities=37% Similarity=0.636 Sum_probs=20.3
Q ss_pred ceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeee
Q 027870 132 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRF 166 (217)
Q Consensus 132 G~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F 166 (217)
|.|.|.|++. ++ .|++|+.|.|+..|-
T Consensus 22 ~~g~f~i~g~-----~~---~g~i~v~p~~~~~W~ 48 (128)
T 2fi9_A 22 GNGGFRFADM-----SH---RGSIICIPSGIYGID 48 (128)
T ss_dssp ETTEEEETTE-----EE---ESEEEEETTEEEEEC
T ss_pred cCCEEEECCE-----EE---EeCEEEeCCCeeccC
Confidence 5667777754 33 499999999998884
No 245
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=22.21 E-value=2.8e+02 Score=22.04 Aligned_cols=56 Identities=11% Similarity=0.112 Sum_probs=38.3
Q ss_pred CccccccC-CCceEEEEEeceE-EEEEecCCCcEEEEEEe----CCCE--EEeCCCCeeeeeeC
Q 027870 114 NFYTEHIH-ADEEIRYCLEGSG-YFDVRDESDQWIRIWIK----AGDL--IVLPAGIYHRFTLD 169 (217)
Q Consensus 114 ~f~~eH~H-~~dEiryileG~g-~f~v~~~~d~wi~i~v~----~GDl--IiIPaG~~H~F~~~ 169 (217)
.+-.+|.= ..+||.+...|.. ...+-..++..-++.+. +|+. ++||+|+.......
T Consensus 51 ~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~ 114 (154)
T 1znp_A 51 VRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGERPQVIVPANCWQSAESL 114 (154)
T ss_dssp CCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEESEEEECTTCEEEEEES
T ss_pred CCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcccEEEEcCCEEEEeeEC
Confidence 34556665 7899999999984 44454445555456664 4554 89999998877655
No 246
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=21.92 E-value=11 Score=30.10 Aligned_cols=29 Identities=21% Similarity=0.500 Sum_probs=22.3
Q ss_pred EEEEe---ceEEEEEecCCCcEEEEEEeCCCEEEeC
Q 027870 127 RYCLE---GSGYFDVRDESDQWIRIWIKAGDLIVLP 159 (217)
Q Consensus 127 ryile---G~g~f~v~~~~d~wi~i~v~~GDlIiIP 159 (217)
-|++. |||...++|.. .-.+++||.|||-
T Consensus 74 TYvI~GerGSG~I~lNGAA----Arl~~~GD~VII~ 105 (143)
T 1pqh_A 74 TYAIAAERGSRIISVNGAA----AHCASVGDIVIIA 105 (143)
T ss_dssp EEEEEECTTCCCEECCGGG----GGTCCTTCEEEEE
T ss_pred EEEEEccCCCceEEechHH----HccCCCCCEEEEE
Confidence 35555 57999999875 5678999999984
No 247
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=21.89 E-value=53 Score=21.27 Aligned_cols=36 Identities=19% Similarity=0.171 Sum_probs=18.9
Q ss_pred EEEeCCCEEEeCCCCeeeeeeCCCCcEEEEEEEcCCCceEEe
Q 027870 148 IWIKAGDLIVLPAGIYHRFTLDTSNYVKLMRLFVGEPVWTAY 189 (217)
Q Consensus 148 i~v~~GDlIiIPaG~~H~F~~~~~~~~~aiRlF~~~~gW~~~ 189 (217)
+.+++||+|.|=... ..+....+-+.-.+..||.|-
T Consensus 25 Lsf~~Gd~i~v~~~~------~~~gW~~g~~~~~g~~G~fP~ 60 (67)
T 3rnj_A 25 LSFKEGDLITLLVPE------ARDGWHYGESEKTKMRGWFPF 60 (67)
T ss_dssp CCBCTTCEEEECSSS------CBTTEEEEEETTTCCEEEEEG
T ss_pred ccCCCCCEEEEeecc------CCCCCEEEEECCCCCEEEEEH
Confidence 667788888764321 112223333223456677774
No 248
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=21.86 E-value=2.8e+02 Score=23.47 Aligned_cols=56 Identities=16% Similarity=0.214 Sum_probs=36.7
Q ss_pred ccccccCCCceEEEEEeceE-EEEEecCCC----------------------------cEEEEEEe----CCCE--EEeC
Q 027870 115 FYTEHIHADEEIRYCLEGSG-YFDVRDESD----------------------------QWIRIWIK----AGDL--IVLP 159 (217)
Q Consensus 115 f~~eH~H~~dEiryileG~g-~f~v~~~~d----------------------------~wi~i~v~----~GDl--IiIP 159 (217)
+-.+|.-..+|+.+.-.|.. .+.+-+.++ ..-++.+. +|+. ++||
T Consensus 72 ~S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP 151 (225)
T 3m3i_A 72 PSHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVP 151 (225)
T ss_dssp CEEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESSCGGGTCBSEEEEC
T ss_pred CcccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCCCccCCceeEEEeC
Confidence 44445556899999999996 454444444 34556664 4664 7899
Q ss_pred CCCeeeeeeCC
Q 027870 160 AGIYHRFTLDT 170 (217)
Q Consensus 160 aG~~H~F~~~~ 170 (217)
+|+.-.....+
T Consensus 152 ~G~WqaA~~~~ 162 (225)
T 3m3i_A 152 GGAIFGSSVAA 162 (225)
T ss_dssp TTCEEEEECCS
T ss_pred CCEEEEEEECC
Confidence 99976665443
No 249
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=21.51 E-value=1.4e+02 Score=21.08 Aligned_cols=31 Identities=6% Similarity=-0.060 Sum_probs=22.9
Q ss_pred CceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIV 157 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIi 157 (217)
.+.+++|++|......+ ++ +.-.+.+||++=
T Consensus 64 ~~~~y~i~~G~v~~~~~---g~-~~~~~~~G~~fG 94 (139)
T 3ocp_A 64 GSLVYVMEDGKVEVTKE---GV-KLCTMGPGKVFG 94 (139)
T ss_dssp CCEEEEEEECCEEEEET---TE-EEEEECTTCEES
T ss_pred CCEEEEEEeCEEEEEEC---CE-EEEEeCCCCEec
Confidence 57899999999988543 33 345679999863
No 250
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=20.80 E-value=1.1e+02 Score=25.53 Aligned_cols=39 Identities=13% Similarity=0.332 Sum_probs=31.5
Q ss_pred EEEEEeceEEEEEecCC----------CcEEEEEEeCCCEEEeCCCCee
Q 027870 126 IRYCLEGSGYFDVRDES----------DQWIRIWIKAGDLIVLPAGIYH 164 (217)
Q Consensus 126 iryileG~g~f~v~~~~----------d~wi~i~v~~GDlIiIPaG~~H 164 (217)
+..-|-+...|.++... +..+++.+..||+++....+..
T Consensus 157 aslSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~ 205 (238)
T 2iuw_A 157 ASLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQA 205 (238)
T ss_dssp EEEEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHH
T ss_pred EEEECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhC
Confidence 34557789999998654 3689999999999999998764
No 251
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=20.77 E-value=23 Score=25.19 Aligned_cols=33 Identities=15% Similarity=0.184 Sum_probs=22.1
Q ss_pred CceEEEEEeceEEEEEecCCCcE-EEE--EEeCCCEE
Q 027870 123 DEEIRYCLEGSGYFDVRDESDQW-IRI--WIKAGDLI 156 (217)
Q Consensus 123 ~dEiryileG~g~f~v~~~~d~w-i~i--~v~~GDlI 156 (217)
.+.+++|++|...+.. ..+++- +-- .+.+||++
T Consensus 47 ~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 47 VNEMLFIIRGRLESVT-TDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CSEEEEEEECCCEEEC-CSSCSSSSSCEEECCTTCBS
T ss_pred CCeEEEEEeeEEEEEE-cCCCcceeeeeeeecCCCEe
Confidence 4678999999999553 333432 112 77899975
No 252
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=20.76 E-value=1.2e+02 Score=23.46 Aligned_cols=23 Identities=13% Similarity=-0.065 Sum_probs=19.8
Q ss_pred EEEEeCCCEEEeCCCCeeeeeeC
Q 027870 147 RIWIKAGDLIVLPAGIYHRFTLD 169 (217)
Q Consensus 147 ~i~v~~GDlIiIPaG~~H~F~~~ 169 (217)
.+.+.+|++++.-|+-.|+....
T Consensus 113 ~v~l~~G~FaiFfP~d~H~p~~~ 135 (155)
T 1s4c_A 113 TVTMKPKMFAVFYPYEPHKPCCV 135 (155)
T ss_dssp EEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEeCCCEEEEECCCcccccccc
Confidence 47789999999999999998664
No 253
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=20.57 E-value=1.6e+02 Score=25.73 Aligned_cols=41 Identities=20% Similarity=0.103 Sum_probs=32.9
Q ss_pred ceEEEEEeceEEEEEecCCCcEEEEEEeCCCEEEeCCCCe-eeeeeC
Q 027870 124 EEIRYCLEGSGYFDVRDESDQWIRIWIKAGDLIVLPAGIY-HRFTLD 169 (217)
Q Consensus 124 dEiryileG~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~-H~F~~~ 169 (217)
|-....+.|.|...+++. ...+.+.|.+.||.|.. -.|...
T Consensus 80 E~~iV~l~G~~~V~vdG~-----~f~lg~~dalYVp~g~~~v~~as~ 121 (282)
T 1xru_A 80 ELGVINIGGAGTITVDGQ-----CYEIGHRDALYVGKGAKEVVFASI 121 (282)
T ss_dssp EEEEEECSSCEEEEETTE-----EEEECTTCEEEECTTCCCEEEEES
T ss_pred EEEEEEccCeEEEEECCE-----EEecCCCCEEEeCCCCeEEEEEec
Confidence 444667899999999876 67888999999999996 566644
No 254
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=20.46 E-value=35 Score=26.50 Aligned_cols=27 Identities=26% Similarity=0.421 Sum_probs=20.1
Q ss_pred ceEEEEEecCCCcEEEEEEeCCCEEEeCCCCeeee
Q 027870 132 GSGYFDVRDESDQWIRIWIKAGDLIVLPAGIYHRF 166 (217)
Q Consensus 132 G~g~f~v~~~~d~wi~i~v~~GDlIiIPaG~~H~F 166 (217)
|.|.|.|++. ++ .|++|+.|.|+..|-
T Consensus 20 ~~g~f~ing~-----~~---~gsilv~p~~~~~W~ 46 (135)
T 2fvt_A 20 GKGGFYFAGM-----SH---QGSLLFLPDAVWGWD 46 (135)
T ss_dssp ETTEEECSSS-----EE---CSEEEECSSCEEEES
T ss_pred cCCEEEECCE-----EE---EeCEEEeCCCccccC
Confidence 4567777654 33 499999999998874
No 255
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=20.18 E-value=51 Score=20.47 Aligned_cols=12 Identities=8% Similarity=0.285 Sum_probs=8.2
Q ss_pred EEEEeCCCEEEe
Q 027870 147 RIWIKAGDLIVL 158 (217)
Q Consensus 147 ~i~v~~GDlIiI 158 (217)
.+.+++||.|.|
T Consensus 17 eLs~~~Gd~i~v 28 (58)
T 4e6r_A 17 ELSLVXGSRVTV 28 (58)
T ss_dssp BCCBCTTCEEEE
T ss_pred EeeEeCCCEEEE
Confidence 466777777765
Done!