Your job contains 1 sequence.
>027878
MDTNGTDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDL
IINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNL
KVCKLSTGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGD
KPTAEEFMQNLVAVTAALEQSVSQVIDFINGKRFSEL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 027878
(217 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2141806 - symbol:MTN1 "methylthioadenosine nuc... 681 5.1e-67 1
TAIR|locus:2116925 - symbol:MTN2 species:3702 "Arabidopsi... 623 7.1e-61 1
UNIPROTKB|Q9KPI8 - symbol:mtnN "5'-methylthioadenosine/S-... 137 5.7e-08 1
TIGR_CMR|VC_2379 - symbol:VC_2379 "MTA/SAH nucleosidase" ... 137 5.7e-08 1
TIGR_CMR|CPS_4743 - symbol:CPS_4743 "MTA/SAH nucleosidase... 98 2.4e-07 2
TIGR_CMR|SO_1322 - symbol:SO_1322 "5-methylthioadenosine ... 131 4.5e-07 1
UNIPROTKB|P0AF12 - symbol:mtn "5'-methylthioadenosine/S-a... 120 1.2e-05 1
TIGR_CMR|BA_4602 - symbol:BA_4602 "MTA/SAH nucleosidase" ... 116 3.9e-05 1
>TAIR|locus:2141806 [details] [associations]
symbol:MTN1 "methylthioadenosine nucleosidase 1"
species:3702 "Arabidopsis thaliana" [GO:0003824 "catalytic
activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0009116 "nucleoside metabolic process" evidence=ISS]
[GO:0008930 "methylthioadenosine nucleosidase activity"
evidence=IDA;NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0019509 "L-methionine salvage from methylthioadenosine"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0000003
"reproduction" evidence=IGI] [GO:0001944 "vasculature development"
evidence=IGI] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR000845 Pfam:PF01048 UniPathway:UPA00904 GO:GO:0005829
GO:GO:0005886 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009693
GO:GO:0000003 GO:GO:0019509 GO:GO:0030912 EMBL:AL161594
eggNOG:COG0775 InterPro:IPR018017 PANTHER:PTHR21234 GO:GO:0001944
EMBL:AL035656 GO:GO:0019284 EMBL:AF370297 EMBL:AY142681
IPI:IPI00520876 PIR:T06079 RefSeq:NP_195591.1 UniGene:At.2827
UniGene:At.31148 PDB:2H8G PDB:2QSU PDB:2QTG PDB:2QTT PDB:3LGS
PDBsum:2H8G PDBsum:2QSU PDBsum:2QTG PDBsum:2QTT PDBsum:3LGS
ProteinModelPortal:Q9T0I8 SMR:Q9T0I8 IntAct:Q9T0I8 STRING:Q9T0I8
PaxDb:Q9T0I8 PRIDE:Q9T0I8 EnsemblPlants:AT4G38800.1 GeneID:830035
KEGG:ath:AT4G38800 TAIR:At4g38800 HOGENOM:HOG000241650
InParanoid:Q9T0I8 KO:K01244 OMA:VDGDKPT PhylomeDB:Q9T0I8
ProtClustDB:PLN02584 EvolutionaryTrace:Q9T0I8 Genevestigator:Q9T0I8
GO:GO:0008782 GO:GO:0008930 Uniprot:Q9T0I8
Length = 267
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 132/181 (72%), Positives = 155/181 (85%)
Query: 37 VDSVGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFHDRRIPIP 96
+DSVGT+ ASL+T+ASIQALKPD+IIN +IGDVFL+SDV FHDRRIPIP
Sbjct: 87 IDSVGTVPASLITFASIQALKPDIIINAGTCGGFKVKGANIGDVFLVSDVVFHDRRIPIP 146
Query: 97 VFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEGAAV 156
+FDLYGVG RQAFSTPNLL+ELNLK+ +LSTGDSLDMS+QDET I ANDAT+KDMEGAAV
Sbjct: 147 MFDLYGVGLRQAFSTPNLLKELNLKIGRLSTGDSLDMSTQDETLIIANDATLKDMEGAAV 206
Query: 157 AYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFINGKRFSE 216
AYVADL K+P +F+KAVTDLVDGDKPTAEEF+QNL VTAALE + ++VI+FING+ S+
Sbjct: 207 AYVADLLKIPVVFLKAVTDLVDGDKPTAEEFLQNLTVVTAALEGTATKVINFINGRNLSD 266
Query: 217 L 217
L
Sbjct: 267 L 267
>TAIR|locus:2116925 [details] [associations]
symbol:MTN2 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008930
"methylthioadenosine nucleosidase activity" evidence=IDA;NAS]
[GO:0019509 "L-methionine salvage from methylthioadenosine"
evidence=IDA] [GO:0000003 "reproduction" evidence=IGI] [GO:0001944
"vasculature development" evidence=IGI] InterPro:IPR000845
Pfam:PF01048 UniPathway:UPA00904 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009693 GO:GO:0000003 GO:GO:0019509
GO:GO:0030912 EMBL:AL161586 InterPro:IPR018017 PANTHER:PTHR21234
GO:GO:0001944 EMBL:AL079347 GO:GO:0019284 HOGENOM:HOG000241650
KO:K01244 ProtClustDB:PLN02584 GO:GO:0008782 GO:GO:0008930
EMBL:BT010195 EMBL:AK229730 IPI:IPI00517272 PIR:T10230
RefSeq:NP_195210.2 UniGene:At.31466 PDB:3BSF PDBsum:3BSF
ProteinModelPortal:Q7XA67 SMR:Q7XA67 STRING:Q7XA67 PaxDb:Q7XA67
PRIDE:Q7XA67 DNASU:829636 EnsemblPlants:AT4G34840.1 GeneID:829636
KEGG:ath:AT4G34840 TAIR:At4g34840 eggNOG:NOG301743
InParanoid:Q7XA67 OMA:HDEESIT PhylomeDB:Q7XA67
EvolutionaryTrace:Q7XA67 Genevestigator:Q7XA67 Uniprot:Q7XA67
Length = 254
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 118/181 (65%), Positives = 148/181 (81%)
Query: 37 VDSVGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFHDRRIPIP 96
V+SVGT+ ASLVTYASI A++PDLIIN I DV+++S VAFHDRRIP+P
Sbjct: 74 VESVGTVPASLVTYASILAIQPDLIINAGTAGGFKAKGACISDVYVVSTVAFHDRRIPVP 133
Query: 97 VFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEGAAV 156
V D+YGVG R F TPNL++ELNLKV +LSTGDS+DMS DE SITANDAT+KDMEGAAV
Sbjct: 134 VLDIYGVGMRNTFPTPNLIKELNLKVGRLSTGDSMDMSPHDEESITANDATVKDMEGAAV 193
Query: 157 AYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFINGKRFSE 216
AYVAD+FKVP + +K VTD+VDG++PT+EEF++NL AVTA L++S+++VIDFI+GK S+
Sbjct: 194 AYVADIFKVPTILIKGVTDIVDGNRPTSEEFLENLAAVTAKLDESLTKVIDFISGKCLSD 253
Query: 217 L 217
L
Sbjct: 254 L 254
>UNIPROTKB|Q9KPI8 [details] [associations]
symbol:mtnN "5'-methylthioadenosine/S-adenosylhomocysteine
nucleosidase" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008152 "metabolic process" evidence=ISS] [GO:0008782
"adenosylhomocysteine nucleosidase activity" evidence=ISS]
[GO:0008930 "methylthioadenosine nucleosidase activity"
evidence=ISS] HAMAP:MF_01684 InterPro:IPR000845 InterPro:IPR010049
Pfam:PF01048 UniPathway:UPA00904 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0019509 eggNOG:COG0775
InterPro:IPR018017 PANTHER:PTHR21234 GO:GO:0009164 GO:GO:0008782
GO:GO:0008930 KO:K01243 ProtClustDB:PRK05584 PANTHER:PTHR21234:SF6
TIGRFAMs:TIGR01704 OMA:SIGRHEV PIR:A82084 RefSeq:NP_232009.1
PDB:3DP9 PDBsum:3DP9 ProteinModelPortal:Q9KPI8 SMR:Q9KPI8
DNASU:2613048 GeneID:2613048 KEGG:vch:VC2379 PATRIC:20083781
BioCyc:MetaCyc:MONOMER-14562 ChEMBL:CHEMBL1250374
EvolutionaryTrace:Q9KPI8 Uniprot:Q9KPI8
Length = 231
Score = 137 (53.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/174 (25%), Positives = 85/174 (48%)
Query: 30 LNLILSEVDSVGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFH 89
++++L + +G +SA+L T I PD++IN ++GDV + S+V H
Sbjct: 41 VDVVLLQ-SGIGKVSAALGTALLISQYAPDVVINTGSAGGFDASL-NVGDVVISSEVRHH 98
Query: 90 DRRIPIPVFDLYGV-GQRQAFSTPNLLREL---------NLKVCK--LSTGDSLDMSSQD 137
D + +++ + GQ AF L + N + + TGD+ +++
Sbjct: 99 DADVTAFGYEIGQMAGQPAAFKADEKLMTVAEQALAQLPNTHAVRGLICTGDAFVCTAER 158
Query: 138 ETSITANDATIK--DMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTA-EEFM 188
+ I + ++ +ME +A+A FKVP + V+A++D+ D + P + EEF+
Sbjct: 159 QQFIRQHFPSVVAVEMEASAIAQTCHQFKVPFVVVRAISDVADKESPLSFEEFL 212
>TIGR_CMR|VC_2379 [details] [associations]
symbol:VC_2379 "MTA/SAH nucleosidase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0008782 "adenosylhomocysteine nucleosidase
activity" evidence=ISS] [GO:0008930 "methylthioadenosine
nucleosidase activity" evidence=ISS] HAMAP:MF_01684
InterPro:IPR000845 InterPro:IPR010049 Pfam:PF01048
UniPathway:UPA00904 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0019509 eggNOG:COG0775 InterPro:IPR018017 PANTHER:PTHR21234
GO:GO:0009164 GO:GO:0008782 GO:GO:0008930 KO:K01243
ProtClustDB:PRK05584 PANTHER:PTHR21234:SF6 TIGRFAMs:TIGR01704
OMA:SIGRHEV PIR:A82084 RefSeq:NP_232009.1 PDB:3DP9 PDBsum:3DP9
ProteinModelPortal:Q9KPI8 SMR:Q9KPI8 DNASU:2613048 GeneID:2613048
KEGG:vch:VC2379 PATRIC:20083781 BioCyc:MetaCyc:MONOMER-14562
ChEMBL:CHEMBL1250374 EvolutionaryTrace:Q9KPI8 Uniprot:Q9KPI8
Length = 231
Score = 137 (53.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 44/174 (25%), Positives = 85/174 (48%)
Query: 30 LNLILSEVDSVGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFH 89
++++L + +G +SA+L T I PD++IN ++GDV + S+V H
Sbjct: 41 VDVVLLQ-SGIGKVSAALGTALLISQYAPDVVINTGSAGGFDASL-NVGDVVISSEVRHH 98
Query: 90 DRRIPIPVFDLYGV-GQRQAFSTPNLLREL---------NLKVCK--LSTGDSLDMSSQD 137
D + +++ + GQ AF L + N + + TGD+ +++
Sbjct: 99 DADVTAFGYEIGQMAGQPAAFKADEKLMTVAEQALAQLPNTHAVRGLICTGDAFVCTAER 158
Query: 138 ETSITANDATIK--DMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTA-EEFM 188
+ I + ++ +ME +A+A FKVP + V+A++D+ D + P + EEF+
Sbjct: 159 QQFIRQHFPSVVAVEMEASAIAQTCHQFKVPFVVVRAISDVADKESPLSFEEFL 212
>TIGR_CMR|CPS_4743 [details] [associations]
symbol:CPS_4743 "MTA/SAH nucleosidase" species:167879
"Colwellia psychrerythraea 34H" [GO:0008782 "adenosylhomocysteine
nucleosidase activity" evidence=ISS] [GO:0008930
"methylthioadenosine nucleosidase activity" evidence=ISS]
[GO:0019509 "L-methionine salvage from methylthioadenosine"
evidence=ISS] HAMAP:MF_01684 InterPro:IPR000845 InterPro:IPR010049
Pfam:PF01048 UniPathway:UPA00904 GO:GO:0019509 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0775 InterPro:IPR018017
PANTHER:PTHR21234 GO:GO:0009164 GO:GO:0008782 GO:GO:0008930
HSSP:P0AF12 HOGENOM:HOG000259346 KO:K01243 OMA:LLVGKAK
PANTHER:PTHR21234:SF6 TIGRFAMs:TIGR01704 RefSeq:YP_271387.1
ProteinModelPortal:Q47UY5 STRING:Q47UY5 GeneID:3521873
KEGG:cps:CPS_4743 PATRIC:21472303
BioCyc:CPSY167879:GI48-4749-MONOMER Uniprot:Q47UY5
Length = 243
Score = 98 (39.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 27/94 (28%), Positives = 50/94 (53%)
Query: 125 LSTGDSLDMSSQDETSITANDATIK--DMEGAAVAYVADLFKVPALFVKAVTDLVDGDKP 182
++TGD+ +D AN T+ +MEGAA+A K P + +++++D+ + P
Sbjct: 151 ITTGDTFMTKEEDVAKARANFPTMAAVEMEGAAIAQACLQLKTPFVVIRSLSDIAGKESP 210
Query: 183 -TAEEFMQNLVAVTAALEQSVSQVIDFINGKRFS 215
T EE+++ AV ++ Q V ++ + GK S
Sbjct: 211 HTFEEYLET-AAVNSS--QLVLNMLGQLKGKVLS 241
Score = 76 (31.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 20/89 (22%), Positives = 40/89 (44%)
Query: 20 YEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGD 79
Y H ++++ + +G ++A+L T I + D ++N +GD
Sbjct: 31 YTFHQGQLDGSDVVIVQ-SGIGKVAAALATAILIDRFQVDYVVNTGSAGGFDASL-KVGD 88
Query: 80 VFLISDVAFHDRRIPIPVFDLYGVGQRQA 108
+ + S+V +HD + + F Y +GQ A
Sbjct: 89 IVVSSEVRYHD--VDLTAFG-YEIGQLPA 114
>TIGR_CMR|SO_1322 [details] [associations]
symbol:SO_1322 "5-methylthioadenosine
nucleosidase/S-adenosylhomocysteine nucleosidase" species:211586
"Shewanella oneidensis MR-1" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0008782 "adenosylhomocysteine nucleosidase
activity" evidence=ISS] [GO:0008930 "methylthioadenosine
nucleosidase activity" evidence=ISS] HAMAP:MF_01684
InterPro:IPR000845 InterPro:IPR010049 Pfam:PF01048
UniPathway:UPA00904 GO:GO:0019509 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0775 InterPro:IPR018017
PANTHER:PTHR21234 GO:GO:0009164 GO:GO:0008782 GO:GO:0008930
HSSP:P0AF12 HOGENOM:HOG000259346 KO:K01243 PANTHER:PTHR21234:SF6
TIGRFAMs:TIGR01704 RefSeq:NP_716942.1 ProteinModelPortal:Q8EHA7
GeneID:1169143 KEGG:son:SO_1322 PATRIC:23522300 OMA:SIGRHEV
ProtClustDB:CLSK906203 Uniprot:Q8EHA7
Length = 236
Score = 131 (51.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 41/157 (26%), Positives = 72/157 (45%)
Query: 40 VGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFHDRRIPIPVFD 99
+G ++AS+ T I+ PD +IN SIGD+ + S+V HD + ++
Sbjct: 50 IGKVAASIATTLLIEKYAPDAVINTGSAGGFVDSL-SIGDIVISSEVRHHDVDVTAFGYE 108
Query: 100 LYGVGQRQA--FSTPNLLRELNLKVCKLS----------TGDSLDMSSQDETSITANDAT 147
+ + Q+ A P L+ N + +L TGDS ++ + T
Sbjct: 109 IGQMAQQPAAFIPAPYLVEAANKAIAQLGEVRAIEGLICTGDSFICDPVRTKTMLEHFPT 168
Query: 148 IK--DMEGAAVAYVADLFKVPALFVKAVTDLVDGDKP 182
+ +MEGAA+A V F VP + +++++D + D P
Sbjct: 169 MAACEMEGAAIAQVCHQFGVPFVVIRSLSDNANNDSP 205
>UNIPROTKB|P0AF12 [details] [associations]
symbol:mtn "5'-methylthioadenosine/S-adenosylhomocysteine
nucleosidase monomer" species:83333 "Escherichia coli K-12"
[GO:0009164 "nucleoside catabolic process" evidence=IEA]
[GO:0019509 "L-methionine salvage from methylthioadenosine"
evidence=IEA] [GO:0019284 "L-methionine biosynthetic process from
S-adenosylmethionine" evidence=IDA] [GO:0003001 "generation of a
signal involved in cell-cell signaling" evidence=IDA] [GO:0008930
"methylthioadenosine nucleosidase activity" evidence=IEA;IDA]
[GO:0008782 "adenosylhomocysteine nucleosidase activity"
evidence=IEA;IDA] HAMAP:MF_01684 InterPro:IPR000845
InterPro:IPR010049 Pfam:PF01048 UniPathway:UPA00904 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0019509 DrugBank:DB00173 EMBL:U70214 eggNOG:COG0775
InterPro:IPR018017 PANTHER:PTHR21234 GO:GO:0009164 EMBL:M31772
GO:GO:0003001 GO:GO:0019284 GO:GO:0008782 GO:GO:0008930
HOGENOM:HOG000259346 KO:K01243 ProtClustDB:PRK05584
PANTHER:PTHR21234:SF6 TIGRFAMs:TIGR01704 EMBL:U24438 EMBL:M83735
PIR:S45227 RefSeq:NP_414701.1 RefSeq:YP_488462.1 PDB:1JYS PDB:1NC1
PDB:1NC3 PDB:1Y6Q PDB:1Y6R PDB:1Z5N PDB:1Z5O PDB:1Z5P PDB:3O4V
PDBsum:1JYS PDBsum:1NC1 PDBsum:1NC3 PDBsum:1Y6Q PDBsum:1Y6R
PDBsum:1Z5N PDBsum:1Z5O PDBsum:1Z5P PDBsum:3O4V
ProteinModelPortal:P0AF12 SMR:P0AF12 IntAct:P0AF12
SWISS-2DPAGE:P0AF12 PaxDb:P0AF12 PRIDE:P0AF12
EnsemblBacteria:EBESCT00000000541 EnsemblBacteria:EBESCT00000015764
GeneID:12931997 GeneID:948542 KEGG:ecj:Y75_p0156 KEGG:eco:b0159
PATRIC:32115427 EchoBASE:EB1082 EcoGene:EG11090 OMA:QRAGCEI
BioCyc:EcoCyc:EG11090-MONOMER BioCyc:ECOL316407:JW0155-MONOMER
BioCyc:MetaCyc:EG11090-MONOMER BindingDB:P0AF12 ChEMBL:CHEMBL2866
EvolutionaryTrace:P0AF12 Genevestigator:P0AF12 Uniprot:P0AF12
Length = 232
Score = 120 (47.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 44/180 (24%), Positives = 80/180 (44%)
Query: 40 VGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFHDRRIPIPVFD 99
+G ++A+L ++ KPD+IIN +GD+ + + +HD + ++
Sbjct: 50 IGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTL-KVGDIVVSDEARYHDADVTAFGYE 108
Query: 100 LYGV--GQRQAFSTPNLL--------RELNLKVCK--LSTGDSLDMSSQDETSITAN--D 145
YG G F + L ELNL + + +GD+ S I N
Sbjct: 109 -YGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQ 167
Query: 146 ATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTA-EEFMQNLVAVTAALEQSVSQ 204
A +ME A+A+V F VP + V+A++D+ D + +EF+ ++ + +S+ Q
Sbjct: 168 AIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQ 227
>TIGR_CMR|BA_4602 [details] [associations]
symbol:BA_4602 "MTA/SAH nucleosidase" species:198094
"Bacillus anthracis str. Ames" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0008782 "adenosylhomocysteine nucleosidase
activity" evidence=ISS] [GO:0008930 "methylthioadenosine
nucleosidase activity" evidence=ISS] HAMAP:MF_01684
InterPro:IPR000845 InterPro:IPR010049 Pfam:PF01048
UniPathway:UPA00904 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0019509 eggNOG:COG0775
InterPro:IPR018017 PANTHER:PTHR21234 GO:GO:0009164 GO:GO:0008782
GO:GO:0008930 RefSeq:NP_846821.1 RefSeq:YP_021248.2
RefSeq:YP_030518.1 HSSP:P0AF12 ProteinModelPortal:Q81LL4 SMR:Q81LL4
DNASU:1088631 EnsemblBacteria:EBBACT00000011240
EnsemblBacteria:EBBACT00000018004 EnsemblBacteria:EBBACT00000023762
GeneID:1088631 GeneID:2816559 GeneID:2850331 KEGG:ban:BA_4602
KEGG:bar:GBAA_4602 KEGG:bat:BAS4270 HOGENOM:HOG000259346 KO:K01243
OMA:LLVGKAK ProtClustDB:PRK05584
BioCyc:BANT260799:GJAJ-4326-MONOMER
BioCyc:BANT261594:GJ7F-4474-MONOMER PANTHER:PTHR21234:SF6
TIGRFAMs:TIGR01704 Uniprot:Q81LL4
Length = 231
Score = 116 (45.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/167 (24%), Positives = 80/167 (47%)
Query: 40 VGTISASLVTYASIQALKPDLIINXXXXXXXXXXXXSIGDVFLISDVAFHDRRIPIPVFD 99
+G ++A++ T ++ KP+ +IN ++GDV + ++V HD + + F+
Sbjct: 50 IGKVNAAMSTTILLERYKPEKVINTGSAGGFHHSL-NVGDVVISTEVRHHD--VDVTAFN 106
Query: 100 L-YGV--GQRQAFSTPNLL---------RELNLKVCK--LSTGDSLDMSSQDETSITAN- 144
YG G F L E N++V K ++TGDS MS + + +
Sbjct: 107 YEYGQVPGMPPGFKADEALVALAEKCMQAEENIQVVKGMIATGDSF-MSDPNRVAAIRDK 165
Query: 145 --DATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTA-EEFM 188
+ +ME AAVA V ++VP + ++A++D+ + + ++F+
Sbjct: 166 FENLYAVEMEAAAVAQVCHQYEVPFVIIRALSDIAGKESNVSFDQFL 212
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 217 205 0.00096 111 3 11 22 0.48 32
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 553 (59 KB)
Total size of DFA: 134 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.18u 0.13s 17.31t Elapsed: 00:00:01
Total cpu time: 17.19u 0.13s 17.32t Elapsed: 00:00:01
Start: Thu May 9 15:06:28 2013 End: Thu May 9 15:06:29 2013