Query 027878
Match_columns 217
No_of_seqs 160 out of 1209
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 03:45:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bsf_A AT4G34840, nucleosidase 100.0 9.9E-41 3.4E-45 279.5 20.1 201 11-217 47-254 (254)
2 2h8g_A 5'-methylthioadenosine 100.0 3.7E-40 1.2E-44 278.1 22.1 202 10-217 59-267 (267)
3 4g41_A MTA/SAH nucleosidase; m 100.0 1.3E-38 4.5E-43 263.4 24.4 190 5-209 28-234 (236)
4 3o4v_A MTA/SAH nucleosidase; m 100.0 1.7E-37 5.7E-42 256.6 23.1 193 5-211 25-233 (234)
5 3dp9_A MTA/SAH nucleosidase; v 100.0 3.9E-37 1.3E-41 253.9 23.4 191 5-209 23-230 (231)
6 3eei_A 5-methylthioadenosine n 100.0 4.9E-37 1.7E-41 253.7 23.0 191 5-209 26-233 (233)
7 3nm6_B MTA/SAH nucleosidase; h 100.0 6.8E-37 2.3E-41 252.2 23.5 191 4-208 24-229 (230)
8 1zos_A 5'-methylthioadenosine 100.0 1.1E-35 3.9E-40 244.6 24.5 190 6-209 24-229 (230)
9 3bl6_A 5'-methylthioadenosine 100.0 9.7E-36 3.3E-40 245.0 22.5 189 6-208 25-229 (230)
10 1z34_A Purine nucleoside phosp 100.0 7.1E-32 2.4E-36 223.1 19.2 183 6-202 37-232 (235)
11 1odk_A Purine nucleoside phosp 100.0 3.3E-32 1.1E-36 225.1 16.2 179 10-202 43-232 (235)
12 1je0_A MTAP;, 5'-methylthioade 100.0 2.7E-32 9.2E-37 225.7 15.5 174 10-197 42-229 (236)
13 1vhw_A Purine nucleoside phosp 100.0 1.2E-31 4.1E-36 224.3 18.5 184 8-205 43-238 (253)
14 3uaw_A PNP, purine nucleoside 100.0 1.1E-31 3.7E-36 222.3 16.6 173 9-194 41-224 (235)
15 3u40_A Pnpase, purine nucleosi 100.0 5.4E-31 1.9E-35 219.0 18.0 172 6-191 47-230 (242)
16 2b94_A Purine nucleoside phosp 100.0 1E-31 3.6E-36 226.3 12.8 182 11-210 68-264 (267)
17 3phc_A Purine nucleoside phosp 100.0 6.1E-30 2.1E-34 216.1 16.0 187 8-209 43-245 (275)
18 3mb8_A Purine nucleoside phosp 100.0 1.2E-29 4.1E-34 214.7 17.6 155 9-179 48-215 (279)
19 1cb0_A Protein (5'-deoxy-5'-me 100.0 3E-29 1E-33 213.0 19.8 186 12-211 42-260 (283)
20 3ddo_A Urdpase, upase, uridine 100.0 2.4E-29 8.3E-34 210.3 17.9 154 9-177 46-223 (253)
21 1t8s_A AMP nucleosidase; alpha 100.0 4.3E-29 1.5E-33 224.1 20.2 158 9-181 257-434 (484)
22 1wta_A 5'-methylthioadenosine 100.0 9E-29 3.1E-33 209.1 19.3 195 8-211 38-257 (275)
23 2a8y_A 5'-methylthioadenosine 100.0 1.3E-28 4.5E-33 207.6 19.6 192 8-211 34-252 (270)
24 1ybf_A AMP nucleosidase; struc 100.0 1.2E-28 4.1E-33 207.7 17.3 148 19-181 58-216 (268)
25 3p0f_A Uridine phosphorylase 2 100.0 4.2E-29 1.4E-33 213.1 13.5 183 8-207 72-293 (297)
26 3qpb_A Uridine phosphorylase; 100.0 6E-29 2E-33 210.8 13.0 156 9-179 72-249 (282)
27 3euf_A Uridine phosphorylase 1 100.0 1.8E-28 6.1E-33 211.5 15.1 185 8-209 101-324 (328)
28 3ozb_A Methylthioadenosine pho 100.0 6.1E-27 2.1E-31 196.0 19.3 182 13-206 49-257 (259)
29 3odg_A Xanthosine phosphorylas 99.9 2.1E-26 7.1E-31 195.0 21.7 185 14-209 76-284 (287)
30 3bje_A Nucleoside phosphorylas 99.9 8.1E-27 2.8E-31 202.6 19.2 161 7-181 70-323 (349)
31 1g2o_A Purine nucleoside phosp 99.9 6.2E-26 2.1E-30 190.8 21.0 180 13-209 70-268 (268)
32 2p4s_A Purine nucleoside phosp 99.9 1.4E-25 4.7E-30 195.3 22.7 187 14-211 152-369 (373)
33 1vmk_A Purine nucleoside phosp 99.9 1.9E-25 6.4E-30 188.4 22.3 182 13-208 73-276 (277)
34 1tcv_A Purine-nucleoside phosp 99.9 3.3E-25 1.1E-29 188.0 21.5 188 13-211 68-286 (287)
35 3fuc_A Purine nucleoside phosp 99.9 1.7E-24 5.8E-29 183.2 22.1 183 14-209 67-282 (284)
36 3la8_A SMU.1229, putative puri 99.9 1E-24 3.5E-29 185.0 19.2 183 14-209 98-303 (303)
37 3khs_A Purine nucleoside phosp 99.9 2.1E-24 7.2E-29 182.7 20.7 184 14-212 64-282 (285)
38 3phb_E Purine nucleoside phosp 99.9 6.3E-24 2.1E-28 182.0 20.7 185 14-211 102-319 (324)
39 1qe5_A Pentosyltransferase; en 99.9 1.6E-23 5.5E-28 175.9 20.5 177 14-207 65-265 (266)
40 2ebj_A Pyrrolidone carboxyl pe 62.4 22 0.00074 27.5 6.6 28 44-71 44-71 (192)
41 3giu_A Pyrrolidone-carboxylate 62.0 24 0.00081 27.8 6.8 34 45-80 50-83 (215)
42 4gxh_A Pyrrolidone-carboxylate 54.7 31 0.0011 27.1 6.4 27 45-71 50-76 (216)
43 3ro0_A Pyrrolidone-carboxylate 52.4 15 0.0005 29.3 4.1 34 45-80 50-83 (223)
44 1a2z_A Pyrrolidone carboxyl pe 51.9 41 0.0014 26.5 6.7 27 45-71 49-75 (220)
45 1x10_A Pyrrolidone-carboxylate 51.2 35 0.0012 26.6 6.2 30 40-71 45-74 (208)
46 4hps_A Pyrrolidone-carboxylate 51.1 38 0.0013 26.9 6.4 27 45-71 71-97 (228)
47 3lac_A Pyrrolidone-carboxylate 50.1 17 0.00059 28.7 4.2 27 45-71 49-75 (215)
48 1iu8_A Pyrrolidone-carboxylate 48.4 19 0.00065 28.2 4.2 27 45-71 45-71 (206)
49 1tvm_A PTS system, galactitol- 45.3 69 0.0024 22.1 6.4 51 33-87 28-79 (113)
50 3fwy_A Light-independent proto 32.6 67 0.0023 26.5 5.3 32 33-65 52-83 (314)
51 2woj_A ATPase GET3; tail-ancho 25.7 75 0.0026 26.6 4.5 37 33-69 22-61 (354)
52 3ug7_A Arsenical pump-driving 25.6 1.1E+02 0.0036 25.5 5.4 29 33-61 30-58 (349)
53 1w2w_B 5-methylthioribose-1-ph 25.5 29 0.001 26.7 1.8 28 145-172 66-93 (191)
54 4dzz_A Plasmid partitioning pr 25.1 1.2E+02 0.0041 22.2 5.3 29 33-61 6-34 (206)
55 3zq6_A Putative arsenical pump 24.5 1E+02 0.0035 25.2 5.1 29 33-61 18-46 (324)
56 1kv4_A Moricin; helix, antibio 23.7 42 0.0014 19.1 1.6 20 40-59 19-38 (42)
57 2woo_A ATPase GET3; tail-ancho 23.2 1.2E+02 0.0039 25.0 5.2 30 33-62 23-52 (329)
58 3fkq_A NTRC-like two-domain pr 22.7 1.2E+02 0.0042 25.2 5.3 27 33-59 148-174 (373)
59 2jr8_A Antimicrobial peptide m 21.7 45 0.0015 19.0 1.5 20 40-59 19-38 (42)
60 1vb5_A Translation initiation 20.2 1.3E+02 0.0043 24.4 4.7 30 145-174 192-221 (276)
61 3ecs_A Translation initiation 20.1 1.4E+02 0.0046 24.9 4.9 31 145-175 204-234 (315)
62 3q9l_A Septum site-determining 20.1 1.8E+02 0.0061 22.2 5.5 29 33-61 7-35 (260)
No 1
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=100.00 E-value=9.9e-41 Score=279.52 Aligned_cols=201 Identities=64% Similarity=1.009 Sum_probs=180.6
Q ss_pred cCcEEEEEEEcceeEEEeeeeeEeeCC------CCcCHHHHHHHHHHHHHhcCCCEEEEEeeeccc-CCCCCCcccEEEE
Q 027878 11 VGHTCTQQEYEIHDLFFANLNLILSEV------DSVGTISASLVTYASIQALKPDLIINAGTAGGF-KAKGASIGDVFLI 83 (217)
Q Consensus 11 ~g~~~~~G~~~~~~v~~~~v~~~~~G~------~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l-~~~~~~~GDvvi~ 83 (217)
++++||.|++++++|.+ +.+|. ..||+++|++++++|+.+|+|+.+|++|+|||+ + +++++|||||+
T Consensus 47 ~~~~~~~G~~~g~~V~v-----~~~G~~h~~~~~~iG~~~aa~~~~~ll~~~~~~~iI~~G~aGgl~~-~~~~~GDvvi~ 120 (254)
T 3bsf_A 47 VTWIMFKGMYKDLNINI-----VCPGKDSTLGVESVGTVPASLVTYASILAIQPDLIINAGTAGGFKA-KGACISDVYVV 120 (254)
T ss_dssp SCCEEEEEEETTEEEEE-----EECCBCTTTCSBCCSHHHHHHHHHHHHHSSCCSEEEEEEEEEECGG-GTCCTTCEEEE
T ss_pred CCeEEEEEEECCEEEEE-----EECCCccccccCccCHHHHHHHHHHHHHHcCCCEEEEEEeecCcCC-CCCccCCEEEE
Confidence 68899999999999988 66661 117999999999999999999999999999999 7 79999999999
Q ss_pred cceeeccCCCCCCCcccCCCCccCCCCChhHhhcCcceEEEEeecCceecChHhHHHHHhCCCcEEcccchHHHHHHHhC
Q 027878 84 SDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEGAAVAYVADLF 163 (217)
Q Consensus 84 ~~~~~~d~~~~~p~f~~y~~g~~p~~~~~~l~~~~~~~~G~i~Sgd~~~~~~~~~~~l~~~~a~~vdME~aava~~a~~~ 163 (217)
++++++|.+.+.+.|+.|..++.|.|+++.|.++++++.|+++|+|+|+.+++.+++++++++++||||+++++++|+++
T Consensus 121 ~~~~~~d~~~~~~~~~~~~~~~~p~~~~~~L~~~~~~~~G~i~sgd~f~~~~~~~~~~~~~g~~~veME~aa~a~va~~~ 200 (254)
T 3bsf_A 121 STVAFHDRRIPVPVLDIYGVGMRNTFPTPNLIKELNLKVGRLSTGDSMDMSPHDEESITANDATVKDMEGAAVAYVADIF 200 (254)
T ss_dssp EEEEESSCCCCSTTHHHHHHCCEECCCCHHHHHHTTCEEEEEEECSCSSCCHHHHHHHHHTTCSEEESSHHHHHHHHHHT
T ss_pred eeeeeccCCCCccccCcCCCCcCCCCCCHHHHhCCCeEEeeEEECccccCCHHHHHHHHHcCCcEEECcHHHHHHHHHHc
Confidence 99999998755445644666778888888888889999999999999998888888888889999999999999999999
Q ss_pred CCCEEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCC
Q 027878 164 KVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFINGKRFSEL 217 (217)
Q Consensus 164 ~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~l~~~~~~~~~~~ 217 (217)
++||++||+|||++++++++.++|.++++.+++++.+.+.++|+.+.+|.+|+|
T Consensus 201 ~ip~~~Ir~ISD~a~~~~~s~~~~~~~~~~a~~~~~~~l~~~l~~l~~~~~~~~ 254 (254)
T 3bsf_A 201 KVPTILIKGVTDIVDGNRPTSEEFLENLAAVTAKLDESLTKVIDFISGKCLSDL 254 (254)
T ss_dssp TCCEEEEEEEEEETTTTCCSTTTTTSHHHHHHHHHHHHHHHHHHHHTTCBTTTC
T ss_pred CCCEEEEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcccC
Confidence 999999999999999876445889999999999999999999999999999997
No 2
>2h8g_A 5'-methylthioadenosine nucleosidase; protein-adenine complex, hydrolase; HET: ADE; 1.50A {Arabidopsis thaliana} PDB: 2qsu_A 2qtg_A* 2qtt_A* 3lgs_A*
Probab=100.00 E-value=3.7e-40 Score=278.06 Aligned_cols=202 Identities=70% Similarity=1.031 Sum_probs=181.2
Q ss_pred ecCcEEEEEEEcceeEEEeeeeeEeeC------CCCcCHHHHHHHHHHHHHhcCCCEEEEEeeeccc-CCCCCCcccEEE
Q 027878 10 VVGHTCTQQEYEIHDLFFANLNLILSE------VDSVGTISASLVTYASIQALKPDLIINAGTAGGF-KAKGASIGDVFL 82 (217)
Q Consensus 10 ~~g~~~~~G~~~~~~v~~~~v~~~~~G------~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l-~~~~~~~GDvvi 82 (217)
.++++||.|++++++|.+ +.+| ...||+++|++++++|+..|+|+.+|++|+|||+ + +++++|||||
T Consensus 59 ~~~~~~~~G~~~g~~Vvv-----~~~G~~h~~~~~~~G~v~aa~~~~~ll~~~~~~~iI~~G~aGgl~~-~~~~~GDvVi 132 (267)
T 2h8g_A 59 GLPWVLYHGVHKDLRINV-----VCPGRDAALGIDSVGTVPASLITFASIQALKPDIIINAGTCGGFKV-KGANIGDVFL 132 (267)
T ss_dssp SCCCEEEEEEETTEEEEE-----EECCBCTTTCSBCCSHHHHHHHHHHHHHHHCCSEEEEEEEEEECGG-GTCCTTCEEE
T ss_pred CCCcEEEEEEECCEEEEE-----EECCCccccccCcccHHHHHHHHHHHHHHcCCCEEEEEEeecccCC-CCCCCCCEEE
Confidence 378899999999999988 6555 1118999999999999999999999999999999 7 7999999999
Q ss_pred EcceeeccCCCCCCCcccCCCCccCCCCChhHhhcCcceEEEEeecCceecChHhHHHHHhCCCcEEcccchHHHHHHHh
Q 027878 83 ISDVAFHDRRIPIPVFDLYGVGQRQAFSTPNLLRELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEGAAVAYVADL 162 (217)
Q Consensus 83 ~~~~~~~d~~~~~p~f~~y~~g~~p~~~~~~l~~~~~~~~G~i~Sgd~~~~~~~~~~~l~~~~a~~vdME~aava~~a~~ 162 (217)
+++++++|.+...+.|+.|..++.|.|++++|.++++++.|+++|||+|+.+++.+++++++++++||||+++++++|++
T Consensus 133 ~~~~i~~d~~~~~~~f~~~~~~~~p~~~~~~L~~~~~~~~G~i~sgd~f~~~~~~~~~l~~~ga~~veME~aa~a~va~~ 212 (267)
T 2h8g_A 133 VSDVVFHDRRIPIPMFDLYGVGLRQAFSTPNLLKELNLKIGRLSTGDSLDMSTQDETLIIANDATLKDMEGAAVAYVADL 212 (267)
T ss_dssp EEEEEESSCCCCSTTHHHHHHCCEECCCCHHHHHHHCCEEEEEEECSCSSCCHHHHHHHHHTTCSEEESSHHHHHHHHHH
T ss_pred EeeheeccCCCCccccCccccCCCCCCCCHHHHhCCCeEEeeEEECCcccCCHHHHHHHHHcCCeEEeccHHHHHHHHHH
Confidence 99999999876544564466677888888888888889999999999999988888888888999999999999999999
Q ss_pred CCCCEEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCC
Q 027878 163 FKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFINGKRFSEL 217 (217)
Q Consensus 163 ~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~l~~~~~~~~~~~ 217 (217)
+++||++||+|||++++++.+.++|.++++.+++++.+.+.++|+.+.+|++|+|
T Consensus 213 ~gip~~~Ir~ISD~a~~~~~s~~~~~~~~~~aa~~~~~~l~~~l~~l~~~~~~~~ 267 (267)
T 2h8g_A 213 LKIPVVFLKAVTDLVDGDKPTAEEFLQNLTVVTAALEGTATKVINFINGRNLSDL 267 (267)
T ss_dssp TTCCEEEEEEEEEETTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred cCCCEEEEEEEEECccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccccccC
Confidence 9999999999999999776456999999999999999999999999999999987
No 3
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=100.00 E-value=1.3e-38 Score=263.42 Aligned_cols=190 Identities=25% Similarity=0.379 Sum_probs=159.8
Q ss_pred CeeEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEc
Q 027878 5 GTDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLIS 84 (217)
Q Consensus 5 ~~~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~ 84 (217)
-+.....+++||+|+|++++|++ +.+| ||+++|++++++|+.+|+|+.+|++|+|||++ +++++|||||++
T Consensus 28 ~~~~~~~~~~~~~G~~~g~~Vvv-----~~~G---~G~~~aa~~~~~l~~~~~~~~ii~~G~aGgl~-~~i~~GDvvi~~ 98 (236)
T 4g41_A 28 AQEHQVLSKTYYTGRFGKHELIL-----VQSG---VGKVMSAMTVAILVEHFKAQAIINTGSAGAVA-SHLAIGDVVVAD 98 (236)
T ss_dssp EEEEEETTEEEEEEEETTEEEEE-----EECC---SHHHHHHHHHHHHHHTTCCSEEEEEEEECBCS-TTCCTTCEEEEE
T ss_pred CceEecCCcEEEEEEECCEEEEE-----EeCC---CCHHHHHHHHHHHHHhCCCCEEEEEeeecCCC-CCCCCCeEEEEe
Confidence 45677899999999999999988 8899 99999999999999999999999999999999 899999999999
Q ss_pred ceeeccCCCCCCCcccCCCCccCCC-----CChhHh---------hcCcceEEEEeecCceecChHhHHHHH-hC-CCcE
Q 027878 85 DVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELNLKVCKLSTGDSLDMSSQDETSIT-AN-DATI 148 (217)
Q Consensus 85 ~~~~~d~~~~~p~f~~y~~g~~p~~-----~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~~~~l~-~~-~a~~ 148 (217)
+++++|.+.+.. .|..++.|.. +|+.|. .++++|.|+++|+|.|+.+++.+++++ ++ ++++
T Consensus 99 ~~i~~d~~~~~~---~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~G~i~S~d~~~~~~~~~~~l~~~~~g~~~ 175 (236)
T 4g41_A 99 RLVYHDVDATAF---GYAYGQMAGQPLYYDCDPQFVAIFKQVLKHEKTNGQVGLIATGDSFVAGQDKIDQIKTAFSNVLA 175 (236)
T ss_dssp EEEESSCBCGGG---TCCTTCCTTSCSSEECCHHHHHHHHHHHHHTTCCEEEEEEEECSBCCCCHHHHHHHHHHSTTCCE
T ss_pred eeEEcCCCCCcc---CCcCCcCCCCCccccCCHHHHHHHHHHHHhcCCCeeeceEEecCCcccCHHHHHHHHHHcCCCeE
Confidence 999999875422 2333333332 245543 257899999999999999998888887 44 9999
Q ss_pred EcccchHHHHHHHhCCCCEEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 149 KDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 149 vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
+|||++|++++|+++++||++||+|||+++++++ +|++| .+.++++..+.++++|+.|
T Consensus 176 veME~aa~~~va~~~~~p~~~Ir~ISD~ad~~~~~~~~~~---~~~Aa~~~a~~v~~~l~~l 234 (236)
T 4g41_A 176 VEMEGAAIAQAAHTAGKPFIVVRAMSDTAAHDANITFDQF---IIEAGKRSAQILMTFLENL 234 (236)
T ss_dssp EESSHHHHHHHHHHTTCCEEEEEEESSCTTCCCCSCHHHH---HHHHHHHHHHHHHHHHHTS
T ss_pred EechHHHHHHHHHHcCCCEEEEEEEEeCCCCcCcccHHHH---HHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999998876 55555 5556666677788887765
No 4
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=100.00 E-value=1.7e-37 Score=256.59 Aligned_cols=193 Identities=24% Similarity=0.368 Sum_probs=163.2
Q ss_pred CeeEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEc
Q 027878 5 GTDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLIS 84 (217)
Q Consensus 5 ~~~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~ 84 (217)
-+.+..+++++|+|++++++|.+ +.+| ||+++|++++++|++.++|+.||++|+|||++ +++++||+|+++
T Consensus 25 ~~~~~~~~~~~~~G~~~g~~v~v-----~~~G---iG~~~aa~~~~~li~~~~~~~iI~~G~aG~l~-~~~~~GDvvi~~ 95 (234)
T 3o4v_A 25 RQTISLGGCEIYTGQLNGTEVAL-----LKSG---IGKVAAALGATLLLEHCKPDVIINTGSAGGLA-PTLKVGDIVVSD 95 (234)
T ss_dssp EEEEEETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHHHCCSEEEEEEEEEECS-TTCCTTCEEEEE
T ss_pred CceEeeCCeEEEEEEECCEEEEE-----EECC---CCHHHHHHHHHHHHHhCCCCEEEEEEEEeccC-CCCCCCcEEEEC
Confidence 45678899999999999999988 8899 99999999999999999999999999999999 799999999999
Q ss_pred ceeeccCCCCCCCcccCCCCccCCC-----CChhHh---------hcCcceEEEEeecCceecChHhHHHHHh-C-CCcE
Q 027878 85 DVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELNLKVCKLSTGDSLDMSSQDETSITA-N-DATI 148 (217)
Q Consensus 85 ~~~~~d~~~~~p~f~~y~~g~~p~~-----~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~~~~l~~-~-~a~~ 148 (217)
+++++|.+.+ .| .|..++.|.. +|++|. .+++++.|+++|+|.|+.+++.+++|++ + ++++
T Consensus 96 ~~~~~d~~~~--~~-~~~~g~~p~~~~~~~~d~~L~~~~~~~~~~~~~~~~~G~~~sgd~f~~~~~~~~~l~~~~~ga~~ 172 (234)
T 3o4v_A 96 EARYHDADVT--AF-GYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIA 172 (234)
T ss_dssp EEEESSCBCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHHHTTCCEEEEEEEECSBCCCSHHHHHHHHHHCTTEEE
T ss_pred eEEEcccCCc--cc-CCccCcCCCCCccccCCHHHHHHHHHHHHhcCCCeEEeeEEEcCeeeCCHHHHHHHHHHcCCccE
Confidence 9999997543 22 2444444432 355553 1478999999999999999888888886 4 9999
Q ss_pred EcccchHHHHHHHhCCCCEEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027878 149 KDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFING 211 (217)
Q Consensus 149 vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~l~~~~~ 211 (217)
+|||+++++++|+++++||++||+|||++++++. ++|.++.+.+++...+.+.++|+.+..
T Consensus 173 veME~aa~a~va~~~~ip~~~ir~ISD~a~~~~~--~~~~~~~~~aa~~~a~~v~~~l~~l~~ 233 (234)
T 3o4v_A 173 VEMEATAIAHVCHNFNVPFVVVRAISDVADQQSH--LSFDEFLAVAAKQSSLMVESLVQKLAH 233 (234)
T ss_dssp EESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehhHHHHHHHHHHhCCCEEEEEEEecCCCCcch--hhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999998765 556666666777777788888887753
No 5
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1
Probab=100.00 E-value=3.9e-37 Score=253.90 Aligned_cols=191 Identities=27% Similarity=0.458 Sum_probs=160.8
Q ss_pred CeeEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEc
Q 027878 5 GTDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLIS 84 (217)
Q Consensus 5 ~~~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~ 84 (217)
-+..+.+++++|+|+|++++|.+ +.+| ||+++|++++++|+..++|+.||++|+|||++ +++++||+|+++
T Consensus 23 ~~~~~~~~~~~~~G~~~g~~v~v-----~~~G---iG~~~aa~~~~~li~~~~~~~iI~~G~aG~l~-~~~~~GDvvi~~ 93 (231)
T 3dp9_A 23 VQEVNQAGCTFYSGQIQGVDVVL-----LQSG---IGKVSAALGTALLISQYAPDVVINTGSAGGFD-ASLNVGDVVISS 93 (231)
T ss_dssp EEEEEETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHHHCCSEEEEEEEEEECS-TTCCTTCEEEEE
T ss_pred cceeeeCCeEEEEEEECCEEEEE-----EECC---CCHHHHHHHHHHHHHhcCCCEEEEEEEeeccC-CCCcCCCEEEEe
Confidence 46678899999999999999998 8899 99999999999999999999999999999999 899999999999
Q ss_pred ceeeccCCCCCCCcccCCCCccCC----C-CChhHh-------h---cCcceEEEEeecCceecChHhHHHHH-hC-CCc
Q 027878 85 DVAFHDRRIPIPVFDLYGVGQRQA----F-STPNLL-------R---ELNLKVCKLSTGDSLDMSSQDETSIT-AN-DAT 147 (217)
Q Consensus 85 ~~~~~d~~~~~p~f~~y~~g~~p~----~-~~~~l~-------~---~~~~~~G~i~Sgd~~~~~~~~~~~l~-~~-~a~ 147 (217)
+++++|.+.+ .| .|..++.|. + +|+.|. + +++++.|+++|+|.|+.+++.+++++ ++ +++
T Consensus 94 ~~~~~d~~~~--~~-g~~~g~~p~~~~~~~~d~~L~~~~~~~~~~~~~~~~~~G~~~sgd~f~~~~~~~~~l~~~~~g~~ 170 (231)
T 3dp9_A 94 EVRHHDADVT--AF-GYEIGQMAGQPAAFKADEKLMTVAEQALAQLPNTHAVRGLICTGDAFVCTAERQQFIRQHFPSVV 170 (231)
T ss_dssp EEEETTCBCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHTTSTTCCEEEEEEEECSBCCCSHHHHHHHHHHCTTEE
T ss_pred eEEEccCCCC--cc-CCcCCcCCCCCceecCCHHHHHHHHHHHHhcCCCceEEEEEEECCeeeCCHHHHHHHHHhcCCCc
Confidence 9999997643 22 233444432 1 355553 1 46899999999999999988888887 47 999
Q ss_pred EEcccchHHHHHHHhCCCCEEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 148 IKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 148 ~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
++|||+++++++|+++++||++||+|||++++++. .+|.++.+.++....+.+.++|+.+
T Consensus 171 ~veME~aa~a~~a~~~~ip~~~ir~ISD~a~~~~~--~~~~~~~~~aa~~~a~~v~~~l~~l 230 (231)
T 3dp9_A 171 AVEMEASAIAQTCHQFKVPFVVVRAISDVADKESP--LSFEEFLPLAAKSSSAMVLKMVELL 230 (231)
T ss_dssp EEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEechHHHHHHHHHHcCCCEEEEEEEecCCCCccc--ccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999998765 5566666667777777788887754
No 6
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1
Probab=100.00 E-value=4.9e-37 Score=253.65 Aligned_cols=191 Identities=26% Similarity=0.379 Sum_probs=162.0
Q ss_pred CeeEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEc
Q 027878 5 GTDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLIS 84 (217)
Q Consensus 5 ~~~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~ 84 (217)
-+..+.++++||+|++++++|.+ +.+| ||+++|++++++|+..|+|+.||++|+|||++ +++++||+|+++
T Consensus 26 ~~~~~~~~~~~~~G~~~g~~v~v-----~~~G---~G~~~aa~~~~~li~~~~~~~iI~~G~aG~l~-~~~~~GDvvv~~ 96 (233)
T 3eei_A 26 VKAVSFGRFSAYEGELAGKRMVL-----ALSG---IGKVNAAVATAWIIREFAADCVINTGSAGGLG-KGLKVGDVVIGT 96 (233)
T ss_dssp EEEEEETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHHHCCSEEEECCEEEECS-TTCCTTCEEEEE
T ss_pred cceeeeCCeEEEEEEECCEEEEE-----EECC---CCHHHHHHHHHHHHHhCCCCEEEEEEEeecCC-CCCccccEEEEc
Confidence 35667899999999999999998 8889 99999999999999999999999999999999 799999999999
Q ss_pred ceeeccCCCCCCCcccCCCCccCCC-----CChhHh-------h--cCc-ceEEEEeecCceecChHhHHHHHh-C-CCc
Q 027878 85 DVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL-------R--ELN-LKVCKLSTGDSLDMSSQDETSITA-N-DAT 147 (217)
Q Consensus 85 ~~~~~d~~~~~p~f~~y~~g~~p~~-----~~~~l~-------~--~~~-~~~G~i~Sgd~~~~~~~~~~~l~~-~-~a~ 147 (217)
+++++|.+.+ .| .|..++.|.. +|+.|. + +++ ++.|+++|+|.|+.+++.++++++ + +++
T Consensus 97 ~~~~~d~~~~--~~-g~~~~~~p~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~G~~~sgd~f~~~~~~~~~l~~~~~ga~ 173 (233)
T 3eei_A 97 ETAHHDVDVT--AF-GYAWGQVPQLPARFASDGILIEAAKRAARTFEGAAVEQGLIVSGDRFVHSSEGVAEIRKHFPEVK 173 (233)
T ss_dssp EEEESSCBCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHHTCCSSCEEEEEEEECSBCCCSHHHHHHHHHHCTTEE
T ss_pred eEEEccCCcc--cc-CCcCCCCCCCCccccCCHHHHHHHHHHHHhcCCCcEEEEEEEEcceeeCCHHHHHHHHHHcCCce
Confidence 9999997643 22 2333444432 355553 1 356 899999999999999888888874 6 999
Q ss_pred EEcccchHHHHHHHhCCCCEEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 148 IKDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 148 ~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
++|||+++++++|+++++||++||+|||+++++++ ++|.++.+.+++...+.+.++|+.+
T Consensus 174 ~veME~aa~a~~a~~~gip~~~ir~IsD~a~~~~~--~~~~~~~~~aa~~~~~~v~~~l~~l 233 (233)
T 3eei_A 174 AVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKAD--ISFDEFLKTAAANSAKMVAEIVKSL 233 (233)
T ss_dssp EEESSHHHHHHHHHHTTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEechHHHHHHHHHHcCCCEEEEEEEecCCCCcch--hhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999998765 5677777778888888888888764
No 7
>3nm6_B MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A {Helicobacter pylori} SCOP: c.56.2.0 PDB: 3nm5_A* 3nm4_A* 4ffs_A*
Probab=100.00 E-value=6.8e-37 Score=252.22 Aligned_cols=191 Identities=21% Similarity=0.338 Sum_probs=159.9
Q ss_pred CCeeEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEE
Q 027878 4 NGTDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLI 83 (217)
Q Consensus 4 ~~~~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~ 83 (217)
+-+..+.+++++|+|+++|++|.+ +.+| ||+++|++++++|+..++|+.||++|+|||++ +++++||+|++
T Consensus 24 ~~~~~~~~~~~~~~G~~~g~~v~v-----~~~G---~G~~~aa~~~~~l~~~~~~~~iI~~G~aG~l~-~~~~~Gdvvi~ 94 (230)
T 3nm6_B 24 DFEEIPLGGNVFHKGVYHNKEIIV-----AYSK---IGKVHSTLTTTSMILAFGVQKVLFSGVAGSLV-KDLKINDLLVA 94 (230)
T ss_dssp CCEEEEETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHHHCCSEEEEEEEEEECS-TTCCTTCEEEE
T ss_pred cccEEEECCEEEEEEEECCEEEEE-----EECC---CCHHHHHHHHHHHHHhCCCCEEEEEEeecCCC-CCCccccEEEE
Confidence 457788999999999999999998 8889 99999999999999999999999999999999 89999999999
Q ss_pred cceeeccCCCCCCCcccCCCCccCCC-----CChhHh---------hcCcceEEEEeecCceecChHhHHHHHh-CCCcE
Q 027878 84 SDVAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELNLKVCKLSTGDSLDMSSQDETSITA-NDATI 148 (217)
Q Consensus 84 ~~~~~~d~~~~~p~f~~y~~g~~p~~-----~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~~~~l~~-~~a~~ 148 (217)
++++++|.+.+ .| .|+.+..|.+ +|+.|. .+++++.|+++|+|.|+.+++.++++++ +++++
T Consensus 95 ~~~~~~d~~~~--~~-g~~~g~~p~~~~~~~~d~~l~~~~~~~~~~~~~~~~~G~~~sgd~f~~~~~~~~~l~~~~ga~~ 171 (230)
T 3nm6_B 95 TQLVQHDVDLS--AF-DHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEFKASA 171 (230)
T ss_dssp EEEEETTCCCG--GG-TCCTTCCTTSCSEEECCHHHHHHHHHHHHHTTCCEEEEEEEECSSCCCCHHHHHHHHHHHCCSE
T ss_pred eeEEEccCCCc--cc-CCCCCCCCCCCccccCCHHHHHHHHHHHHhcCCCEEEEEEEECChhcCCHHHHHHHHHHcCCcE
Confidence 99999997643 12 2333444432 355553 2578999999999999999888888875 79999
Q ss_pred EcccchHHHHHHHhCCCCEEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027878 149 KDMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDF 208 (217)
Q Consensus 149 vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~l~~ 208 (217)
+|||+++++++|+++++||++||+|||+++++++ .+|.++.+.+++...+.+..+|+.
T Consensus 172 veME~aa~a~~a~~~gi~~~~ir~IsD~a~~~~~--~~~~~~~~~a~~~~~~~~~~~l~~ 229 (230)
T 3nm6_B 172 VEMEGASVAFVCQKFGVPCCVLRSISDNADEKAG--MSFDEFLEKSAHTSAKFLKSMVDE 229 (230)
T ss_dssp EESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EeccHHHHHHHHHHcCCCEEEEEEEecCCCCCCc--cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998665 455555556666666777777764
No 8
>1zos_A 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase; transition state, inhibitor, hydrolase; HET: MTM; 1.60A {Streptococcus pneumoniae R6} PDB: 3mms_A*
Probab=100.00 E-value=1.1e-35 Score=244.63 Aligned_cols=190 Identities=23% Similarity=0.386 Sum_probs=162.9
Q ss_pred eeEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcc
Q 027878 6 TDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISD 85 (217)
Q Consensus 6 ~~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~ 85 (217)
+..+.+++++|.|++++++|.+ +.+| +|+++|+++++.|+..|+|+.+|++|+|||++ +++++||+|++++
T Consensus 24 ~~~~~~~~~~~~G~~~g~~V~~-----~~~G---~G~~~aa~~~~~l~~~~~~~~ii~~G~aG~l~-~~~~~Gdvvv~~~ 94 (230)
T 1zos_A 24 QEQVVLGNTYHTGTIASHEVVL-----VESG---IGKVMSAMSVAILADHFQVDALINTGSAGAVA-EGIAVGDVVIADK 94 (230)
T ss_dssp EEEEETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHHHCCSEEEEEEEEEECS-TTCCTTCEEEEEE
T ss_pred ceeecCCeEEEEEEECCEEEEE-----EECC---CCHHHHHHHHHHHHHhcCCCEEEEEEEecCCC-CCCccCCEEEEee
Confidence 4567789999999999999998 7889 99999999999999999999999999999999 7999999999999
Q ss_pred eeeccCCCCCCCcccCCCCccCCC-----CChhHhh---------cCcceEEEEeecCceecChHhHHHHH-hC-CCcEE
Q 027878 86 VAFHDRRIPIPVFDLYGVGQRQAF-----STPNLLR---------ELNLKVCKLSTGDSLDMSSQDETSIT-AN-DATIK 149 (217)
Q Consensus 86 ~~~~d~~~~~p~f~~y~~g~~p~~-----~~~~l~~---------~~~~~~G~i~Sgd~~~~~~~~~~~l~-~~-~a~~v 149 (217)
++++|.+.+ .| .|+.++.|.. +++.|.+ +++++.|+++|+|.|+.+++.++++. ++ +++++
T Consensus 95 ~~~~d~~~~--~~-g~~~g~~p~~~~~~~~d~~l~~~~~~~~~~~~~~~~~G~~~sgd~f~~~~~~~~~l~~~~~g~~~v 171 (230)
T 1zos_A 95 LAYHDVDVT--AF-GYAYGQMAQQPLYFESDKTFVAQIQESLSQLDQNWHLGLIATGDSFVAGNDKIEAIKSHFPEVLAV 171 (230)
T ss_dssp EEESSCBCG--GG-TCCTTCCTTSCSCEECCHHHHHHHHHTSCTTCCSEEEEEEEECSBCCCSHHHHHHHHHHCTTEEEE
T ss_pred eEEcCCCCC--cc-CCcCCCCCCCCCcccCCHHHHHHHHHHHHhcCCcEEEeeEEECCcccCCHHHHHHHHHhCCCCcEe
Confidence 999998653 12 2444444432 3555542 46899999999999999988777775 57 99999
Q ss_pred cccchHHHHHHHhCCCCEEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 150 DMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 150 dME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
|||+++++++|+++++|+++||+|||+++++++ ++|.++++.+++++.+.+.++|+.+
T Consensus 172 eME~aa~~~~a~~~~~~~~~ir~IsD~~~~~~~--~~~~~~~~~aa~~~~~~~~~~l~~l 229 (230)
T 1zos_A 172 EMEGAAIAQAAHTLNLPVLVIRAMSDNANHEAN--IFFDEFIIEAGRRSAQVLLAFLKAL 229 (230)
T ss_dssp ESSHHHHHHHHHHTTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHcCCCEEEEEEeccCCCCcch--hhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998764 7777778888888889999998875
No 9
>3bl6_A 5'-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN, alpha and beta proteins, hydrolase; HET: FMC; 1.70A {Staphylococcus aureus}
Probab=100.00 E-value=9.7e-36 Score=245.04 Aligned_cols=189 Identities=30% Similarity=0.451 Sum_probs=160.0
Q ss_pred eeEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcc
Q 027878 6 TDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISD 85 (217)
Q Consensus 6 ~~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~ 85 (217)
+..+.++.++|.|++++++|.+ +.+| ||+++|++++++|+..|+|+.+|++|+|||++ +++++||+|++++
T Consensus 25 ~~~~~~~~~~~~G~~~g~~V~~-----~~~G---~G~~~aa~~~~~l~~~~~~~~ii~~G~aG~l~-~~~~~Gdvvv~~~ 95 (230)
T 3bl6_A 25 SEISVAHVKFYTGILKDREVVI-----TQSG---IGKVNAAISTTLLINKFKPDVIINTGSAGALD-ESLNVGDVLISDD 95 (230)
T ss_dssp EEEEETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHHHCCSEEEECSEEEECS-TTCCTTCEEEEEE
T ss_pred ceeeeCCeEEEEEEECCEEEEE-----EECC---CCHHHHHHHHHHHHHhcCCCEEEEEEEEcCCC-CCCccCCEEEECe
Confidence 4567789999999999999988 8889 99999999999999999999999999999999 7999999999999
Q ss_pred eeeccCCCCCCCcccCCCCccCCC-----CChhHh---------hcCcceEEEEeecCceecChHhHHHHH-hC-CCcEE
Q 027878 86 VAFHDRRIPIPVFDLYGVGQRQAF-----STPNLL---------RELNLKVCKLSTGDSLDMSSQDETSIT-AN-DATIK 149 (217)
Q Consensus 86 ~~~~d~~~~~p~f~~y~~g~~p~~-----~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~~~~l~-~~-~a~~v 149 (217)
++++|.+.+ .| .|+.++.|.. +++.|. .+++++.|+++|+|.|+++++.++++. ++ +++++
T Consensus 96 ~~~~d~~~~--~~-g~~~g~~p~~~~~~~~d~~l~~~~~~~~~~~~~~~~~G~~~sgd~f~~~~~~~~~l~~~~~g~~~v 172 (230)
T 3bl6_A 96 VKYHDADAT--AF-GYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAV 172 (230)
T ss_dssp EEESSCCCG--GG-TCCTTCCTTSCSSEECCHHHHHHHHHHHHHTTCCEEEEEEEECSSCCCSHHHHHHHHHHCTTEEEE
T ss_pred eEEccCCCc--cc-CCcCCcCCCCCccccCCHHHHHHHHHHHHhcCCCeEEeeEeEcchhhCCHHHHHHHHHhCCCcEEE
Confidence 999998643 12 2334444432 355553 146899999999999999988777665 57 99999
Q ss_pred cccchHHHHHHHhCCCCEEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027878 150 DMEGAAVAYVADLFKVPALFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDF 208 (217)
Q Consensus 150 dME~aava~~a~~~~ip~~~ir~ISD~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~l~~ 208 (217)
|||+++++++|+++++||++||+|||+++++++ .+|.++++.+++++.+.++++|+.
T Consensus 173 eME~a~~~~~a~~~~~~~~~ir~IsD~~~~~~~--~~~~~~~~~aa~~~~~~~~~~l~~ 229 (230)
T 3bl6_A 173 EMEATAIAQTCYQFNVPFVVVRAVSDLANGEAE--MSFEAFLEKAAVSSSQTVEALVSQ 229 (230)
T ss_dssp ESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EchHHHHHHHHHHcCCCEEEEEEeccCCCCcch--hhHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998765 667677777888888888888865
No 10
>1z34_A Purine nucleoside phosphorylase; alpha-beta-alpha sandwich, transferase; HET: 2FD; 2.40A {Trichomonas vaginalis} PDB: 1z33_A* 1z35_A* 1z36_A* 1z37_A* 1z38_A* 1z39_A* 2i4t_A* 2isc_A*
Probab=100.00 E-value=7.1e-32 Score=223.11 Aligned_cols=183 Identities=16% Similarity=0.143 Sum_probs=143.7
Q ss_pred eeE-EecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEc
Q 027878 6 TDI-DVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLIS 84 (217)
Q Consensus 6 ~~~-~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~ 84 (217)
+.+ +.+++++|+|+|++++|.+ +.+| ||+++|++++++|+..++|+.+|++|+|||++ +++++||+|+++
T Consensus 37 ~~~~~~~~~~~~~G~~~g~~V~v-----~~~G---~G~~~aa~~~~~l~~~~g~~~iI~~G~aGgl~-~~~~~GDvvv~~ 107 (235)
T 1z34_A 37 KLVNNVRGIQGYTGTYKGKPISV-----MGHG---MGLPSICIYAEELYSTYKVKTIIRVGTCGAID-MDIHTRDIVIFT 107 (235)
T ss_dssp EEEECGGGCCEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHTSCCCEEEEEEEEEECS-TTCCTTCEEEEE
T ss_pred eeeeeeCCEEEEEEEECCEEEEE-----EecC---CCHHHHHHHHHHHHHHcCCCEEEEEEccccCC-CCCCCCCEEEEc
Confidence 445 6789999999999999988 8899 99999999999999999999999999999999 799999999999
Q ss_pred ceeeccCCCCCCCcccCCCC-ccCCCCChhHh---------hcCcceEEEEeecCceecChHhH-HHHHhCCCcEEcccc
Q 027878 85 DVAFHDRRIPIPVFDLYGVG-QRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSSQDE-TSITANDATIKDMEG 153 (217)
Q Consensus 85 ~~~~~d~~~~~p~f~~y~~g-~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~~-~~l~~~~a~~vdME~ 153 (217)
+++++|.. + +. |.++ ..|..+++.|. .+++++.|+++|+|.|+.+.+.+ +.+++++++++|||+
T Consensus 108 ~~i~~d~~-~-~~---~~p~~~~~~~~d~~L~~~~~~~~~~~~~~~~~G~~~s~d~f~~~~~~~~~~~~~~g~~~veME~ 182 (235)
T 1z34_A 108 SAGTNSKI-N-RI---RFMDHDYPATASFDVVCALVDAAKELNIPAKVGKGFSTDLFYNPQTELAQLMNKFHFLAVEMES 182 (235)
T ss_dssp EEEESCSH-H-HH---HTTTSCCCCBCCHHHHHHHHHHHHHTTCCCEEEEEEECSCSSCSCTHHHHHHHHTTCCEEESSH
T ss_pred ceeccCCc-c-cc---ccCCCCcCccCCHHHHHHHHHHHHHcCCCeEEEEEeecCcCcCCcHHHHHHHHHcCceEEechH
Confidence 99998872 2 11 2111 11222455553 14689999999999999876544 445578999999999
Q ss_pred hHHHHHHHhCCCCEEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHH
Q 027878 154 AAVAYVADLFKVPALFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSV 202 (217)
Q Consensus 154 aava~~a~~~~ip~~~ir~ISD~~~~~~~-~~~~~~~~~~~a~~~~~~~l 202 (217)
++++++|+++++||++||+|||+++.... +.+++.+...++.+..++.+
T Consensus 183 aa~~~~a~~~gi~~~~i~~IsD~~~~~~~~~~~~~~~~~~~~~~~al~~~ 232 (235)
T 1z34_A 183 AGLFPIADLYGARAGCICTVSDHILHHEETTAEERQNSFQNMMKIALEAA 232 (235)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEEESSSCCC-----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEEEEEEecCCCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987653 55666655555554444433
No 11
>1odk_A Purine nucleoside phosphorylase; alpha-beta protein, transferase, riken structural genomics/proteomics initiative, RSGI; 1.9A {Thermus thermophilus} SCOP: c.56.2.1 PDB: 1odj_A* 1odi_A 1odl_A
Probab=100.00 E-value=3.3e-32 Score=225.13 Aligned_cols=179 Identities=15% Similarity=0.154 Sum_probs=141.1
Q ss_pred ecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcceeec
Q 027878 10 VVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFH 89 (217)
Q Consensus 10 ~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~~~ 89 (217)
.+++++|+|+|++++|.+ +.+| ||+++|+++++.|+. ++|+.+|++|+|||++ +++++||+|++++++++
T Consensus 43 ~~~~~~~~G~~~g~~V~v-----~~~G---~G~~~aa~~~~~l~~-~~~~~iI~~G~aG~l~-~~~~~GDvvv~~~~~~~ 112 (235)
T 1odk_A 43 HRGLWGYTGLYKGVPVSV-----QTTG---MGTPSAAIVVEELVR-LGARVLVRVGTAGAAS-SDLAPGELIVAQGAVPL 112 (235)
T ss_dssp GGGCCEEEEEETTEEEEE-----ECCC---SSHHHHHHHHHHHHH-TTCCEEEEEEEEEESS-TTSCTTCEEEEEEEEEE
T ss_pred cCCeEEEEEEECCEEEEE-----EecC---CCHHHHHHHHHHHHH-CCCCEEEEEeccccCC-CCCCCCCEEEEchhhcc
Confidence 388999999999999988 7888 999999999999998 9999999999999999 79999999999999998
Q ss_pred cCCCCCCCcccCCCCccCCCCChhHh---------hcCcceEEEEeecCceecChHhHHH-HHhCCCcEEcccchHHHHH
Q 027878 90 DRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSSQDETS-ITANDATIKDMEGAAVAYV 159 (217)
Q Consensus 90 d~~~~~p~f~~y~~g~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~~~~-l~~~~a~~vdME~aava~~ 159 (217)
|.. + +. .|+....|..+++.|. .+++++.|+++|+|.|+.+.+.+.+ +++++++++|||+++++++
T Consensus 113 dg~-~-~~--~~~~~~~~~~~d~~L~~~~~~~~~~~~~~~~~G~~~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~~ 188 (235)
T 1odk_A 113 DGT-T-RQ--YLEGRPYAPVPDPEVFRALWRRAEALGYPHRVGLVASEDAFYATTPEEARAWARYGVLAFEMEASALFLL 188 (235)
T ss_dssp SHH-H-HH--HHTTCCCCCCCCHHHHHHHHHHHHHTTCCEEEEEEEEESCTTTCCHHHHHHHHTTTEEEEESSHHHHHHH
T ss_pred CCC-C-cc--ccCCCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEEEEeCCCCCCCHHHHHHHHHcCCcEEeccHHHHHHH
Confidence 852 1 11 1221122323455553 1468999999999999988765544 4468999999999999999
Q ss_pred HHhCCCCEEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHH
Q 027878 160 ADLFKVPALFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSV 202 (217)
Q Consensus 160 a~~~~ip~~~ir~ISD~~~~~~~-~~~~~~~~~~~a~~~~~~~l 202 (217)
|+++++||++||+|||++++... +.+++.+...+..+...+.+
T Consensus 189 a~~~gip~~~ir~IsD~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 232 (235)
T 1odk_A 189 GRMRGVRTGAILAVSNRIGDPELAPPEVLQEGVRRMVEVALEAV 232 (235)
T ss_dssp HHHHTCEEEEEEEEEEEC------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEEEecCcccCccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987544 56777666666655554443
No 12
>1je0_A MTAP;, 5'-methylthioadenosine phosphorylase; alpha-beta protein, transferase; 1.60A {Sulfolobus solfataricus} SCOP: c.56.2.1 PDB: 1jdt_A* 1jdu_A 1jdv_A* 1jdz_A* 1jds_A 1je1_A* 1jp7_A 1jpv_A
Probab=100.00 E-value=2.7e-32 Score=225.68 Aligned_cols=174 Identities=16% Similarity=0.180 Sum_probs=138.2
Q ss_pred ecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcceeec
Q 027878 10 VVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFH 89 (217)
Q Consensus 10 ~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~~~ 89 (217)
.+++++|+|+|++++|.+ +.+| ||+++|+++++.|+. ++|+.+|++|+|||++ +++++||+||+++++++
T Consensus 42 ~~~~~~~~G~~~g~~V~v-----~~~G---~G~~~aa~~~~~l~~-~~~~~iI~~G~aGgl~-~~~~~GDvvi~~~~~~~ 111 (236)
T 1je0_A 42 NRGFLVYTGKYNGETVSI-----ATHG---IGGPSIAIVLEELAM-LGANVFIRYGTTGALV-PYINLGEYIIVTGASYN 111 (236)
T ss_dssp GGGCCEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHH-TTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEBC
T ss_pred cCCeEEEEEEECCEEEEE-----EecC---CCHhHHHHHHHHHHH-cCCCEEEEEeccccCC-CCCCCCCEEEEhhhccC
Confidence 478999999999999988 8889 999999999999998 9999999999999999 79999999999999998
Q ss_pred cCCCCCCCcccCCCC--ccCCCCChhHh---------hcCcceEEEEeecCceecChHhH-HHHHhCCCcEEcccchHHH
Q 027878 90 DRRIPIPVFDLYGVG--QRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSSQDE-TSITANDATIKDMEGAAVA 157 (217)
Q Consensus 90 d~~~~~p~f~~y~~g--~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~~-~~l~~~~a~~vdME~aava 157 (217)
|.+. |..|.++ ..|..+++.|. .+++++.|+++|+|.|+.+.+.+ +.+++++++++|||+++++
T Consensus 112 d~~~----~~~~~p~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~G~~~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~ 187 (236)
T 1je0_A 112 QGGL----FYQYLRDNACVASTPDFELTNKLVTSFSKRNLKYYVGNVFSSDAFYAEDEEFVKKWSSRGNIAVEMECATLF 187 (236)
T ss_dssp CSHH----HHHHHSSCCBCCCCCCHHHHHHHHHHHHHTTCCEEEEEEEECSCTTCCCTTHHHHHHTTTEEEEESSHHHHH
T ss_pred CCCc----cccccCCCCCCCCCCCHHHHHHHHHHHHHcCCCeEEEEEEecCcCccCCHHHHHHHHHcCCeEEeccHHHHH
Confidence 8752 2123222 12323455553 14689999999999999876444 4455689999999999999
Q ss_pred HHHHhCCCCEEEEEeeecCCCC-CCc-cHHHHHHHHHHHHHH
Q 027878 158 YVADLFKVPALFVKAVTDLVDG-DKP-TAEEFMQNLVAVTAA 197 (217)
Q Consensus 158 ~~a~~~~ip~~~ir~ISD~~~~-~~~-~~~~~~~~~~~a~~~ 197 (217)
++|+++++||++||+|||++++ ... +++++.+...+..+.
T Consensus 188 ~~a~~~gi~~~~ir~IsD~~~~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1je0_A 188 TLSKVKGWKSATVLVVSDNLAKGGIWITKEELEKSVMDGAKA 229 (236)
T ss_dssp HHHHHHTCEEEEEEEEEEECC--------CHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEEEEEcccccCCccCCHHHHHHHHHHHHHH
Confidence 9999999999999999999987 333 667776655444433
No 13
>1vhw_A Purine nucleoside phosphorylase; structural genomics, transferase; HET: ADN; 1.54A {Vibrio cholerae} SCOP: c.56.2.1 PDB: 1vhj_A* 3of3_A* 3occ_A* 1pw7_A* 1pr1_A* 1pr2_A* 1pr4_A* 1pr5_A* 1pr0_A* 1pr6_A* 3onv_A 1pk7_A* 1k9s_A* 1pke_A* 1pk9_A 3ooe_A 3ooh_A 1ecp_A 1a69_A 1oty_A* ...
Probab=99.98 E-value=1.2e-31 Score=224.28 Aligned_cols=184 Identities=18% Similarity=0.178 Sum_probs=146.6
Q ss_pred EEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEccee
Q 027878 8 IDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVA 87 (217)
Q Consensus 8 ~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~ 87 (217)
.+.+++.+|+|+|++++|.+ +.+| ||+++|++++++|+..++|+.||++|+|||++ +++++||+||++.++
T Consensus 43 ~~~~~~~~~~G~~~g~~V~v-----~~~G---~G~~~aa~~~~~l~~~~g~~~iI~~G~aGgl~-~~~~~GDvVi~~~~i 113 (253)
T 1vhw_A 43 CDVRNMFGYTGTYKGRRISV-----MGHG---MGIPSCSIYVTELIKDYGVKKIIRVGSCGAVN-EGIKVRDVVIGMGAC 113 (253)
T ss_dssp ECGGGCCEEEEEETTEEEEE-----ECCC---SSHHHHHHHHHHHHHHHCCCEEEEEEEEEECS-TTSCTTCEEEEEEEE
T ss_pred eeeCCeEEEEEEECCEEEEE-----EeCC---CCHHHHHHHHHHHHHHcCCCEEEEEEeccCCC-CCCCCCCEEEEcceE
Confidence 46789999999999999988 8888 99999999999999999999999999999999 799999999999998
Q ss_pred eccCCCCCCCcccCCCCc-cCCCCChhHhh---------cCcceEEEEeecCceecChHh-HHHHHhCCCcEEcccchHH
Q 027878 88 FHDRRIPIPVFDLYGVGQ-RQAFSTPNLLR---------ELNLKVCKLSTGDSLDMSSQD-ETSITANDATIKDMEGAAV 156 (217)
Q Consensus 88 ~~d~~~~~p~f~~y~~g~-~p~~~~~~l~~---------~~~~~~G~i~Sgd~~~~~~~~-~~~l~~~~a~~vdME~aav 156 (217)
+|.+.+ + .|-++. .+..+++.|.+ +++++.|+++|+|.|+.+.+. .+.+++++++++|||++++
T Consensus 114 -~d~g~~-~---~~~p~~~~~~~~d~~L~~~l~~~~~~~~~~~~~G~i~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~ 188 (253)
T 1vhw_A 114 -TDSKVN-R---IRFKDHDFAAIADYKMVKAAEEAAKARGIDVKVGNLFSAELFYTPDPSMFDVMDKYGIVGVEMEAAGI 188 (253)
T ss_dssp -ESCSHH-H---HHTTTSBCCCBCCHHHHHHHHHHHHHTTCCCEEEEEEECSCSSCSCTTHHHHHHHTTCCEEESSHHHH
T ss_pred -ECCCCc-c---cccCCCcccccCCHHHHHHHHHHHHHcCCCeEEEEEEEeCccccCcHHHHHHHHHcCCcEEechHHHH
Confidence 566532 1 111111 12224555531 468999999999999987644 4455678999999999999
Q ss_pred HHHHHhCCCCEEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHH
Q 027878 157 AYVADLFKVPALFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSVSQV 205 (217)
Q Consensus 157 a~~a~~~~ip~~~ir~ISD~~~~~~~-~~~~~~~~~~~a~~~~~~~l~~~ 205 (217)
+++|+++++|+++||+|||+++.... +.++..+...++.+...+.+.++
T Consensus 189 ~~~a~~~gi~~~~I~~IsD~~~~~~~~~~~e~~~~~~~~~~~ale~~~~~ 238 (253)
T 1vhw_A 189 YGVAAEYGAKALAICTVSDHIKTGEQTTSEERQNTFNEMIEIALDSVLIG 238 (253)
T ss_dssp HHHHHHHTCEEEEEEEEEEETTTCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEEccCCCCccCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999986543 66776666666555555555443
No 14
>3uaw_A PNP, purine nucleoside phosphorylase DEOD-type; necleoside phosphorylase I (NP-I) family, transferase; HET: ADN GOL; 1.20A {Bacillus cereus} PDB: 2ac7_A 3uav_A* 3uax_A* 1xe3_A 3uay_A* 3uaz_A* 4d8y_A 4d8x_A 4d8v_A 4d98_A 4d9h_A* 4da0_A* 4da6_A* 4da7_A* 4da8_A* 4dab_A* 4dae_A* 4dan_A* 4dao_A* 4dar_A*
Probab=99.98 E-value=1.1e-31 Score=222.33 Aligned_cols=173 Identities=21% Similarity=0.206 Sum_probs=138.1
Q ss_pred EecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcceee
Q 027878 9 DVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAF 88 (217)
Q Consensus 9 ~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~~ 88 (217)
+.+++++|+|+|+|++|.+ +.+| ||+++|++++++|+..++|+.||++|+|||++ +++++||+||++++++
T Consensus 41 ~~r~~~~~~G~~~g~~v~v-----~~~G---~G~~~aa~~~~~l~~~~g~~~iI~~G~aGgl~-~~~~~GDvVi~~~~i~ 111 (235)
T 3uaw_A 41 NVRGMLGFTGTYKGKRVSV-----QGTG---MGVPSISIYVNELIQSYGVKNLIRVGTCGAIQ-KDVKVRDVIIAMTACT 111 (235)
T ss_dssp CGGGCCEEEEEETTEEEEE-----ECCC---SSHHHHHHHHHHHHHHHCCCEEEEEEEEEECS-TTSCTTCEEEEEEEEE
T ss_pred eeCCEEEEEEEECCEEEEE-----EeCC---CCHHHHHHHHHHHHHHCCCCEEEEEeeccCCC-CCCCCCcEEEEChhhc
Confidence 7889999999999999999 8889 99999999999999999999999999999999 7999999999999884
Q ss_pred ccCCCCCCCcccCCCCccCCCCChhHh---------hcCcceEEEEeecCceecCh-HhHHHHHhCCCcEEcccchHHHH
Q 027878 89 HDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSS-QDETSITANDATIKDMEGAAVAY 158 (217)
Q Consensus 89 ~d~~~~~p~f~~y~~g~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~-~~~~~l~~~~a~~vdME~aava~ 158 (217)
|.+.. +. .+.....|..+|+.|. .+++++.|+++|+|.|+.+. +..+.++++++++||||++++++
T Consensus 112 -d~g~~-~~--~~~~~~~~~~~d~~L~~~l~~~a~~~g~~~~~G~~~s~d~f~~~~~~~~~~~~~~g~~~veME~aa~~~ 187 (235)
T 3uaw_A 112 -DSNMN-RL--TFPGFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYRESMDMVKKLGDYGVLAVEMETTALYT 187 (235)
T ss_dssp -SCSHH-HH--HSTTCCCCCBCCHHHHHHHHHHHHHHTCCEEEEEEEECSCSSCSCCHHHHHHHHTTCCEEESSHHHHHH
T ss_pred -cCCCC-cc--ccCCCcccccCCHHHHHHHHHHHHHcCCCeEEEEEEEcCcCccCCHHHHHHHHHcCCcEEEccHHHHHH
Confidence 54422 10 1111112222466654 25789999999999998754 45677778999999999999999
Q ss_pred HHHhCCCCEEEEEeeecCCCCCCc-cHHHHHHHHHHH
Q 027878 159 VADLFKVPALFVKAVTDLVDGDKP-TAEEFMQNLVAV 194 (217)
Q Consensus 159 ~a~~~~ip~~~ir~ISD~~~~~~~-~~~~~~~~~~~a 194 (217)
+|+++|+|+++||+|||++..... +.+++.....+.
T Consensus 188 va~~~gi~~~~i~~ISD~~~~~e~~~~~e~~~~~~~~ 224 (235)
T 3uaw_A 188 LAAKYGVNALSVLTVSDHIFTGEETTSEERQTTFNEM 224 (235)
T ss_dssp HHHHHTCEEEEEEEEEEETTTCCBCCTGGGHHHHHHH
T ss_pred HHHHcCCCEEEEEEEecccCCCCcCChHHHHHHHHHH
Confidence 999999999999999999875432 334444433333
No 15
>3u40_A Pnpase, purine nucleoside phosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: ADN; 2.05A {Entamoeba histolytica} SCOP: c.56.2.0 PDB: 3tl6_A*
Probab=99.97 E-value=5.4e-31 Score=219.02 Aligned_cols=172 Identities=19% Similarity=0.224 Sum_probs=139.5
Q ss_pred eeEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcc
Q 027878 6 TDIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISD 85 (217)
Q Consensus 6 ~~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~ 85 (217)
...+.+++.+|+|+|+|++|.+ +.+| ||++++++++++|+..++|+.||++|+|||++ +++++||+||+++
T Consensus 47 ~~~~~r~~~~~tG~~~g~~V~v-----~~~G---~G~~saai~~~eLi~~~gv~~iI~~GtaGgl~-~~~~~GDvVi~~~ 117 (242)
T 3u40_A 47 QYNSVRGAVGYTGYYKGVKLSV-----QAHG---MGMPSIGIYAYELFNFYGVKRIIRIGSAGAFD-ESLKLGDIVIGMG 117 (242)
T ss_dssp EEECGGGCCEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHHSCCCEEEEEEEEEECS-TTCCTTCEEEEEE
T ss_pred EEEEECCEEEEEEEECCEEEEE-----EeCC---CCHHHHHHHHHHHHHHcCCCEEEEEEeeeCCC-CCCCCCCEEEecc
Confidence 4467899999999999999999 8899 99999999999999999999999999999999 8999999999999
Q ss_pred eeeccCCCCCCCcccCCCC-ccCCCCChhHh---------hcCcceEEEEeecCceecChHhHHHHHhCCCcEEcccchH
Q 027878 86 VAFHDRRIPIPVFDLYGVG-QRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSSQDETSITANDATIKDMEGAA 155 (217)
Q Consensus 86 ~~~~d~~~~~p~f~~y~~g-~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~~~~l~~~~a~~vdME~aa 155 (217)
+++.+ +.. ..|..+ ..|..+|++|. .+++++.|+++|+|.|+.+++..++++++++++||||+++
T Consensus 118 ~i~~~-~~~----~~~~~~~~~~~~~d~~L~~~l~~~a~~~g~~~~~G~i~s~d~fy~~~~~~~~~~~~g~~~veMEsaa 192 (242)
T 3u40_A 118 ACYDS-NFE----RQYDIPGKYSCIADFQLCREAVDAAEKLGYRYKVGNIYSANYFYDDGDHSGAWKKMGVLAVEMEAAA 192 (242)
T ss_dssp EEESC-SSS----GGGTCSSBCCEECCHHHHHHHHHHHHHTTCCEEEEEEEECSCSSCSSCCCHHHHHTTCCEEESSHHH
T ss_pred eeecC-Ccc----ccccCCCcccccCCHHHHHHHHHHHHHcCCceEEeEEEEeCCCcCCHHHHHHHHHcCCcEEEchHHH
Confidence 98654 322 123222 12222466653 2578999999999999977776777888999999999999
Q ss_pred HHHHHHhCCCCEEEEEeeec-CCC-CCCccHHHHHHHH
Q 027878 156 VAYVADLFKVPALFVKAVTD-LVD-GDKPTAEEFMQNL 191 (217)
Q Consensus 156 va~~a~~~~ip~~~ir~ISD-~~~-~~~~~~~~~~~~~ 191 (217)
++++|+.+++|+++||+||| +.- ++..+.++.+...
T Consensus 193 l~~va~~~gi~~~~i~~ISD~~~~~~e~~~~~e~~~~~ 230 (242)
T 3u40_A 193 LYMIAARARKQALCMLTISDLCYGSGEKMTAEERRTKF 230 (242)
T ss_dssp HHHHHHHHTCEEEEEEEEEEESSTTCCBCCHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEEEEEcCcccCCCcCCHHHHHHHH
Confidence 99999999999999999999 753 3332345544433
No 16
>2b94_A Purine nucleoside phosphorylase; SGPP, structural genomics, PSI, protein structure initiative UDP, ontario/toronto SGC; 1.85A {Plasmodium knowlesi} PDB: 3emv_A 1sq6_A 2bsx_A* 3enz_A*
Probab=99.97 E-value=1e-31 Score=226.32 Aligned_cols=182 Identities=12% Similarity=0.087 Sum_probs=139.9
Q ss_pred cCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCC-CCcccEEEEcceeec
Q 027878 11 VGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKG-ASIGDVFLISDVAFH 89 (217)
Q Consensus 11 ~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~-~~~GDvvi~~~~~~~ 89 (217)
++.++|+|+|++++|.+ +.+| ||+++|+++++.|+ +++|+.||++|+|||++ ++ +++|||||+++++++
T Consensus 68 ~~~~~~~G~~~g~~V~v-----~~~G---iG~~~aa~~~~~L~-~~g~~~iI~~G~aGgl~-~~~l~~GDvVi~~~~i~~ 137 (267)
T 2b94_A 68 REYKSVECTYKGQKFLC-----VSHG---VGSAGCAICFEELM-NNGAKVIIRAGSCGSLQ-PTQMKRGDICICNAAVRE 137 (267)
T ss_dssp -CEEEEEEEETTEEEEE-----EEEC---TTCSCSHHHHHHHH-HTTCCEEEEEEEEEESC-TTTCCTTCEEEEEEEEEE
T ss_pred CCeEEEEEEECCEEEEE-----EeCC---CCHHHHHHHHHHHH-HcCCCEEEEeccccccC-cccCCCCCEEEEhhhccc
Confidence 67889999999999988 8899 99999999999998 69999999999999999 78 999999999999999
Q ss_pred cCCCCCCCcccCCCCccCCCCChhHh---------hcCcceEEEEeecCceecCh---HhHHHHHhCCCcEEcccchHHH
Q 027878 90 DRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSS---QDETSITANDATIKDMEGAAVA 157 (217)
Q Consensus 90 d~~~~~p~f~~y~~g~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~---~~~~~l~~~~a~~vdME~aava 157 (217)
|. .. +. |.+...|..+++.|. .+++++.|+++|+|.|+.+. ...+.++++++++||||+++++
T Consensus 138 dg-~~-~~---~~p~~~~~~~d~~L~~~l~~~~~~~~~~~~~G~i~sgd~f~~~~~~~~~~~~~~~~ga~~veME~aa~a 212 (267)
T 2b94_A 138 DR-VS-HL---MIYSDFPAVADFEVYDTLNKVAQELEVPVFNGISLSSDLYYPHKIIPTRLEDYSKANVAVVEMEVATLM 212 (267)
T ss_dssp SS-TH-HH---HSCTTSCEECCHHHHHHHHHHHHHTTCCCEEEEEEEESSHHHHCCCCTTHHHHHHTTCCEEESSHHHHH
T ss_pred CC-CC-cc---ccCCCcCCCCCHHHHHHHHHHHHHcCCCeEEEEEeeeCccccCCcchHHHHHHHHcCCeEEeCcHHHHH
Confidence 85 21 11 222223333455553 14789999999999999654 3445566789999999999999
Q ss_pred HHHHhCCCCEEEEEeeecCCCCCCc-cHH-HHHHHHHHHHHHHHHHHHHHHHHhc
Q 027878 158 YVADLFKVPALFVKAVTDLVDGDKP-TAE-EFMQNLVAVTAALEQSVSQVIDFIN 210 (217)
Q Consensus 158 ~~a~~~~ip~~~ir~ISD~~~~~~~-~~~-~~~~~~~~a~~~~~~~l~~~l~~~~ 210 (217)
++|+++++||++||+|||++++... +++ ++ ...++.+..+.++++|+.+.
T Consensus 213 ~va~~~gip~~~Ir~IsD~~~~~~~~~~~~~~---~~~a~~~~~~~~l~~l~~l~ 264 (267)
T 2b94_A 213 VMGTLRKVKTGGIFIVDGCPLKWDEGDFDNNL---VPEKLENMIKISLETCARLA 264 (267)
T ss_dssp HHHHHHTCEEEEEEEEEECGGGC-------CC---CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEEEEEEcccccCccccCCHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999986553 232 22 23344444555666665554
No 17
>3phc_A Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.00A {Plasmodium falciparum} PDB: 1q1g_A* 1nw4_A* 3fow_A*
Probab=99.97 E-value=6.1e-30 Score=216.15 Aligned_cols=187 Identities=14% Similarity=0.079 Sum_probs=144.4
Q ss_pred EEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCC-CCcccEEEEcce
Q 027878 8 IDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKG-ASIGDVFLISDV 86 (217)
Q Consensus 8 ~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~-~~~GDvvi~~~~ 86 (217)
-+.+++++|+|+|+|++|.+ +.+| ||++++++++++|+. ++++.||++|+|||++ ++ +++||+||++.+
T Consensus 43 ~~~r~~~~~tG~~~G~~V~v-----~~~G---iG~psaai~~~eL~~-~gv~~iI~~GtaGgL~-~~~i~~GDiVI~~~a 112 (275)
T 3phc_A 43 AYNREYKSVECHYKGQKFLC-----VSHG---VGSAGCAVCFEELCQ-NGAKVIIRAGSCGSLQ-PDLIKRGDICICNAA 112 (275)
T ss_dssp EEETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHT-TTCCEEEEEEEEEESC-TTTCCTTCEEEEEEE
T ss_pred eeeCCeEEEEEEECCEEEEE-----EECC---CChHHHHHHHHHHHH-CCCCEEEEeeeecCcc-cccCCCCcEEEEhhe
Confidence 36799999999999999999 8899 999999999999986 8999999999999999 79 999999999999
Q ss_pred eeccCCCCCCCcccCCCCccCCCCChhHh---------hcCcceEEEEeecCceecChHh---HHHHHhCCCcEEcccch
Q 027878 87 AFHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSSQD---ETSITANDATIKDMEGA 154 (217)
Q Consensus 87 ~~~d~~~~~p~f~~y~~g~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~---~~~l~~~~a~~vdME~a 154 (217)
+++|. .. + .|.++..|..+|+.|. .+.+++.|+++|+|.|+.+.+. .+.++++|+++||||++
T Consensus 113 i~~dg-~~-~---~y~~~~~p~~~d~~L~~~l~~~a~~~g~~~~~G~v~s~D~Fy~~~~~~~k~~~~~~~Ga~aVEMEsa 187 (275)
T 3phc_A 113 VREDR-VS-H---LLIHGDFPAVGDFDVYDTLNKCAQELNVPVFNGISVSSDMYYPNKIIPSRLEDYSKANAAVVEMELA 187 (275)
T ss_dssp EEESS-HH-H---HHSCTTSCEECCHHHHHHHHHHHHHTTCCCEEEEEEEESCSSCCSSSCCSHHHHHHTTCCEEESSHH
T ss_pred eccCC-cc-c---ccCCCCcCCcCCHHHHHHHHHHHHHcCCCeEEEEEEEeCCCccCchhhHHHHHHHHcCCEEEECcHH
Confidence 98874 22 1 2433333433465553 2578999999999999987653 36677889999999999
Q ss_pred HHHHHHHhCCCCEEEEEeeecCCCCCCc-cH--HHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 155 AVAYVADLFKVPALFVKAVTDLVDGDKP-TA--EEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 155 ava~~a~~~~ip~~~ir~ISD~~~~~~~-~~--~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
+++++|+.+|+|+++|+.|+|....... ++ +...+...++.....+.+.++++.-
T Consensus 188 al~~vA~~~gi~~~~I~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ialeai~~L~~~~ 245 (275)
T 3phc_A 188 TLMVIGTLRKVKTGGILIVDGCPFKWDEGDFDNNLVPHQLENMIKIALGACAKLATKY 245 (275)
T ss_dssp HHHHHHHHTTCEEEEEEEEEECGGGGGGTCBCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEEECCcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999887542211 11 1223334444444455555555443
No 18
>3mb8_A Purine nucleoside phosphorylase; PNP, immucillin H, IMMH, TR; HET: IMH; 1.90A {Toxoplasma gondii}
Probab=99.97 E-value=1.2e-29 Score=214.66 Aligned_cols=155 Identities=16% Similarity=0.049 Sum_probs=132.0
Q ss_pred EecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCC-CCcccEEEEccee
Q 027878 9 DVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKG-ASIGDVFLISDVA 87 (217)
Q Consensus 9 ~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~-~~~GDvvi~~~~~ 87 (217)
+.+++++|+|+|+|++|.+ +.+| ||++++++++++|+. ++++.||++|+|||++ ++ +++||+||++.++
T Consensus 48 ~~r~~~~ytG~~~G~~V~v-----~~~G---iG~psaai~~~eLi~-~gv~~iIriGtaGgL~-~~~l~~GDiVI~~~ai 117 (279)
T 3mb8_A 48 YNREYRSFRVVYDSQPITV-----ISHG---IGCPGTSIAIEELAY-LGAKVIIRAGTCGSLK-PKTLKQGDVCVTYAAV 117 (279)
T ss_dssp EETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHH-TTCCEEEEEEEEEESC-TTTSCTTCEEEEEEEE
T ss_pred eecCeEEEEEEECCEEEEE-----EECC---CCHHHHHHHHHHHHH-CCCCEEEEeecccCcC-cccCCCCCEEEeeeeE
Confidence 6799999999999999999 8899 999999999999987 8999999999999999 79 9999999999999
Q ss_pred eccCCCCCCCcccCCCCccCCCCChhHh---------hcCcceEEEEeecCceecChHh---HHHHHhCCCcEEcccchH
Q 027878 88 FHDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSSQD---ETSITANDATIKDMEGAA 155 (217)
Q Consensus 88 ~~d~~~~~p~f~~y~~g~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~~---~~~l~~~~a~~vdME~aa 155 (217)
++|. .. ..|.++..|..+|+.|. .+.+++.|+++|+|.|+.+.+. .+.+++++++ ||||++|
T Consensus 118 ~~dg-~~----~~y~~~~~p~~~d~~L~~~l~~~a~~~g~~~~~G~v~S~D~Fy~e~~~~~k~~~~~~~Ga~-VEMEsaa 191 (279)
T 3mb8_A 118 NETG-LI----SNILPEGFPCVATPHVYQALMDAAKELGIEAASGIGVTQDYFYQNGILPSKLEMYSKCCDV-IDMEMSG 191 (279)
T ss_dssp ECCH-HH----HHHSCTTCCEECCHHHHHHHHHHHHHHTCCCEEEEEEECSCSCCCCSSCCCHHHHHTTCSE-EESSHHH
T ss_pred cCCC-Cc----cccCCCccCCcCCHHHHHHHHHHHHHcCCCeEEEEEEEECCCccCchHhHHHHHHHHcCCE-EecCHHH
Confidence 8774 21 12433334434566553 2578999999999999976543 4667778999 9999999
Q ss_pred HHHHHHhCCCCEEEEEeeecCCCC
Q 027878 156 VAYVADLFKVPALFVKAVTDLVDG 179 (217)
Q Consensus 156 va~~a~~~~ip~~~ir~ISD~~~~ 179 (217)
++++|+.+|+|+++|++|||....
T Consensus 192 la~vA~~~gv~~~~I~~VSd~~~~ 215 (279)
T 3mb8_A 192 VLGLCQARGIATCGILAVDGSPLQ 215 (279)
T ss_dssp HHHHHHHTTCEEEEEEEECBCGGG
T ss_pred HHHHHHHcCCCEEEEEEEECCccc
Confidence 999999999999999999998754
No 19
>1cb0_A Protein (5'-deoxy-5'-methylthioadenosine phosphor; methylthioadenosine phosphorylase, purine nucleoside phospho purine salvage, adenine; HET: ADE; 1.70A {Homo sapiens} SCOP: c.56.2.1 PDB: 1cg6_A* 1k27_A* 1sd1_A* 1sd2_A* 3ozc_A* 3ozd_A* 3oze_A
Probab=99.97 E-value=3e-29 Score=212.95 Aligned_cols=186 Identities=11% Similarity=0.081 Sum_probs=151.7
Q ss_pred CcEEEEEEEcceeEEEeeeeeE-eeCCCCcCH------HHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEc
Q 027878 12 GHTCTQQEYEIHDLFFANLNLI-LSEVDSVGT------ISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLIS 84 (217)
Q Consensus 12 g~~~~~G~~~~~~v~~~~v~~~-~~G~~gvG~------~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~ 84 (217)
+.++|.|+++|++|.+ + .+| +|+ ++++++ .+++..++++.||++|+|||++ +++++||+||++
T Consensus 42 ~~~~~~G~l~g~~V~~-----~~~~G---~G~~~~~~~v~aa~~-~~~l~~~gv~~iI~~G~aG~l~-~~l~~GDiVi~~ 111 (283)
T 1cb0_A 42 SDALILGKIKNVDCVL-----LARHG---RQHTIMPSKVNYQAN-IWALKEEGCTHVIVTTACGSLR-EEIQPGDIVIID 111 (283)
T ss_dssp SSCEEEEEETTEEEEE-----EETTT---TTTCCCGGGCCHHHH-HHHHHHTTCSEEEEEEEEEECS-TTSCTTCEECCC
T ss_pred CccEEEEEECCEEEEE-----EECCC---CCcccCcccccHHHH-HHHHHHcCCCEEEEecceeecC-CCCCCCcEEEEH
Confidence 6789999999999888 5 489 999 999877 8888999999999999999999 899999999999
Q ss_pred ceeeccCCCCCCCcccCCCC--ccC------C-C-CChhHh---------hcCcceE-EEE--eecCceecChHhHHHHH
Q 027878 85 DVAFHDRRIPIPVFDLYGVG--QRQ------A-F-STPNLL---------RELNLKV-CKL--STGDSLDMSSQDETSIT 142 (217)
Q Consensus 85 ~~~~~d~~~~~p~f~~y~~g--~~p------~-~-~~~~l~---------~~~~~~~-G~i--~Sgd~~~~~~~~~~~l~ 142 (217)
+++++|.+... .| |..+ +.| . + .|+.|. .+++++. |++ .|||+|+++++. +.++
T Consensus 112 ~~i~~~~~~~~-~~--~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~~~~~~~gG~~~~~sG~~f~t~ae~-~~~~ 187 (283)
T 1cb0_A 112 QFIDRTTMRPQ-SF--YDGSHSCARGVCHIPMAEPFCPKTREVLIETAKKLGLRCHSKGTMVTIEGPRFSSRAES-FMFR 187 (283)
T ss_dssp EEEEECCSCCC-CS--CSSSCTTSCSEECCCCSSCSCHHHHHHHHHHHHHTTCCEESCCEEEEECCSSCCCHHHH-HHHH
T ss_pred HHhhCcCCCCC-cc--cCCccccccCccCCCCcccCCHHHHHHHHHHHHHcCCceEcceEEEEeeCCcccCHHHH-HHHH
Confidence 99999874211 12 2222 111 1 1 255553 1467888 788 999999987665 6677
Q ss_pred hCCCcEEcccchHHHHHHHhCCCCEEEEEeeecCCCC---CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027878 143 ANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG---DKP-TAEEFMQNLVAVTAALEQSVSQVIDFING 211 (217)
Q Consensus 143 ~~~a~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~---~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~~~ 211 (217)
++|+++||||+++++++|+++++|+++||.|||++.+ +.. ++++|.+.+++++.++.+.+.++|+.+..
T Consensus 188 ~~Ga~~V~ME~aa~a~vA~~~gi~~~~i~~VSd~a~~~~~~~~~~~~e~~~~~~~~~~~~~~lv~~~i~~l~~ 260 (283)
T 1cb0_A 188 TWGADVINMTTVPEVVLAKEAGICYASIAMATDYDCWKEHEEAVSVDRVLKTLKENANKAKSLLLTTIPQIGS 260 (283)
T ss_dssp HTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEECTTC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HcCCeEEeCcHHHHHHHHHHcCCCEEEEEEEEccccCcCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 7899999999999999999999999999999999532 223 89999999999999999999999998843
No 20
>3ddo_A Urdpase, upase, uridine phosphorylase; transferase, cytoplasm, glycosyltransferase; 1.50A {Salmonella typhimurium} SCOP: c.56.2.1 PDB: 1ryz_A 1sj9_A* 1y1q_A* 1y1s_A 1y1r_A 1zl2_A* 2hn9_A 1y1t_A* 2hsw_A 2hwu_A* 2pga_A* 2hrd_A 3dps_A 3fwp_A* 3nsr_A* 3c74_A* 2qdk_A 2iq5_A 2oec_A* 2i8a_A ...
Probab=99.97 E-value=2.4e-29 Score=210.33 Aligned_cols=154 Identities=15% Similarity=0.086 Sum_probs=126.6
Q ss_pred EecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcceee
Q 027878 9 DVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAF 88 (217)
Q Consensus 9 ~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~~ 88 (217)
+.+++.+|+|+|++++|.+ +.+| +|+++|+++++.| ..|+++.+|++|+|||++ +++++||+||++++++
T Consensus 46 ~~~~~~~~~G~~~g~~V~~-----~~~G---~G~~~aa~~~~~l-~~~g~~~ii~~G~aGgl~-~~~~~Gdvvi~~~~i~ 115 (253)
T 3ddo_A 46 SHREFTSWRAELDGKAVIV-----CSTG---IGGPSTSIAVEEL-AQLGIRTFLRIGTTGAIQ-PHINVGDVLVTTASVR 115 (253)
T ss_dssp EETTEEEEEEEETTEEEEE-----ECCC---SSHHHHHHHHHHH-HHTTCCEEEEEEEECCCS-TTCCTTCEEEEEEEEE
T ss_pred cCCCeEEEEEEECCEEEEE-----EeCC---CChHHHHHHHHHH-HHcCCCEEEEEEeeccCC-CCCCCCeEEEechhee
Confidence 6789999999999999998 7888 9999999999999 779999999999999999 7999999999999999
Q ss_pred ccCCCCCCCcccCCCCccCCCCChhHh---------hcCcceEEEEeecCceecChH---------------hHHHHHhC
Q 027878 89 HDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSSQ---------------DETSITAN 144 (217)
Q Consensus 89 ~d~~~~~p~f~~y~~g~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~~---------------~~~~l~~~ 144 (217)
+|.. . + .|..++.|..+++.|. .+.+++.|.++|+|.|+.+.+ ..+.++++
T Consensus 116 ~dg~-~-~---~y~~~~~p~~~d~~l~~~l~~~a~~~~~~~~~G~~~s~d~F~~~~~r~~~~~~~i~~~~~~~~~~~~~~ 190 (253)
T 3ddo_A 116 LDGA-S-L---HFAPMEFPAVADFACTTALVEAAKSIGATTHVGVTASSDTFYPGQERYDTYSGRVVRRFKGSMEEWQAM 190 (253)
T ss_dssp ESSG-G-G---GTSCTTSCEECCHHHHHHHHHHHHHTTCCEEEEEEEEESCSSGGGTCCCSSSCCCCGGGTTHHHHHHHT
T ss_pred CCCc-c-c---ccCCCccCCcCCHHHHHHHHHHHHHCCCCEEEEEEEEcCcccCCcccccccccchhhhHHHHHHHHHHC
Confidence 9852 2 1 2444444543455543 257899999999999986542 23456678
Q ss_pred CCcEEcccchHHHHHHHhCCCCEEEEEeeecCC
Q 027878 145 DATIKDMEGAAVAYVADLFKVPALFVKAVTDLV 177 (217)
Q Consensus 145 ~a~~vdME~aava~~a~~~~ip~~~ir~ISD~~ 177 (217)
++++||||+++++++|+++|+|+.+|..+++..
T Consensus 191 ga~aveME~aa~a~va~~~gi~~~~i~~v~~~R 223 (253)
T 3ddo_A 191 GVMNYEMESATLLTMCASQGLRAGMVAGVIVNR 223 (253)
T ss_dssp TCCEEESSHHHHHHHHHTTTCEEEEEEEECCCT
T ss_pred CceEEeccHHHHHHHHHHcCCcEEEEEEEEEec
Confidence 999999999999999999999966666555544
No 21
>1t8s_A AMP nucleosidase; alpha-beta-alpha sandwich, alpha-beta fold, hydrolase; HET: FMP; 2.60A {Escherichia coli} SCOP: c.56.2.1 PDB: 1t8r_A* 1t8w_A 1t8y_A 2guw_A
Probab=99.97 E-value=4.3e-29 Score=224.13 Aligned_cols=158 Identities=20% Similarity=0.182 Sum_probs=129.6
Q ss_pred EecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcceee
Q 027878 9 DVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAF 88 (217)
Q Consensus 9 ~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~~ 88 (217)
+..+..|++|+++|++|.+ +.+| ||++||+++++.| ..++|+.||++|+|||++ +++++||+||++++++
T Consensus 257 ~~~~~~~~~G~~~G~~VvV-----v~tG---mG~~nAAi~~~eL-~~~gvk~II~vGtAGgL~-~di~lGDVVIa~~ai~ 326 (484)
T 1t8s_A 257 KHQMPAWHLITADGQGITL-----VNIG---VGPSNAKTICDHL-AVLRPDVWLMIGHCGGLR-ESQAIGDYVLAHAYLR 326 (484)
T ss_dssp HCSSCEEEEEETTSCCEEE-----EECC---SSHHHHHHHHHHH-GGGCCSEEEECCEEEECS-TTCCTTCEEEEEEEEE
T ss_pred cCCCceEEEEEECCEEEEE-----EeCC---CChHHHHHHHHHH-HHcCCCEEEEEEEeeccC-CCCcCCEEEEEeeEEE
Confidence 4577899999999999999 8899 9999999999999 779999999999999999 7999999999999999
Q ss_pred ccCCCCCCCcccCCCCccCCCCChh----Hh----h---------cCcceEEEEeecCceecC---hHhHHHHHhCCCcE
Q 027878 89 HDRRIPIPVFDLYGVGQRQAFSTPN----LL----R---------ELNLKVCKLSTGDSLDMS---SQDETSITANDATI 148 (217)
Q Consensus 89 ~d~~~~~p~f~~y~~g~~p~~~~~~----l~----~---------~~~~~~G~i~Sgd~~~~~---~~~~~~l~~~~a~~ 148 (217)
+|...+ . |.+...|..++.. |. + +++++.|+++|+|.|+++ ++.+++++..++++
T Consensus 327 ~Dg~~~--~---y~~~~~p~pa~~~l~~~L~~aA~~~~~~~g~~lg~~v~~G~i~SgD~Fy~E~r~~~~~~~~~~~Gala 401 (484)
T 1t8s_A 327 DDHVLD--A---VLPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVA 401 (484)
T ss_dssp ECCTTT--T---TSCTTSCCCCCHHHHHHHHHHHHHHSSCCGGGGGGTEEEEEEEEESCTTGGGGHHHHHHHHHHHTEEE
T ss_pred CCCCcc--c---ccCCCCCCCCCHHHHHHHHHHHHHHhhhcccccCCceEEEEEEEcCccccccCCHHHHHHHHhcCCeE
Confidence 887533 1 2222233212222 21 1 457899999999999843 34445555679999
Q ss_pred EcccchHHHHHHHhCCCCEEEEEeeecCCCCCC
Q 027878 149 KDMEGAAVAYVADLFKVPALFVKAVTDLVDGDK 181 (217)
Q Consensus 149 vdME~aava~~a~~~~ip~~~ir~ISD~~~~~~ 181 (217)
||||+++++++|+++++|+++||+|||+++..+
T Consensus 402 VEMEsAAla~vA~~~gvp~l~Ir~VSD~a~~~e 434 (484)
T 1t8s_A 402 IDMESATIAAQGYRFRVPYGTLLCVSDKPLHGE 434 (484)
T ss_dssp EESSHHHHHHHHHHTTCCEEEEEEEEECTTSSC
T ss_pred EeccHHHHHHHHHHcCCCEEEEEEEEecCCccc
Confidence 999999999999999999999999999998654
No 22
>1wta_A 5'-methylthioadenosine phosphorylase; A/B structure, transferase; HET: ADE; 1.78A {Aeropyrum pernix}
Probab=99.96 E-value=9e-29 Score=209.11 Aligned_cols=195 Identities=14% Similarity=0.089 Sum_probs=156.4
Q ss_pred EEecC--cEEEEEEEcceeEEEeeeeeEe-eCCCC---cCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEE
Q 027878 8 IDVVG--HTCTQQEYEIHDLFFANLNLIL-SEVDS---VGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVF 81 (217)
Q Consensus 8 ~~~~g--~~~~~G~~~~~~v~~~~v~~~~-~G~~g---vG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvv 81 (217)
+.+++ .++|+|+++|++|.+ +. +|... +++++++ +..+++..++++.||++|+|||++ +++++||+|
T Consensus 38 ~~~g~~~~~~~~G~~~G~~V~v-----~~r~G~gh~~~~~~v~~~-a~~~~l~~~Gv~~iI~~gaaG~l~-~~l~~GDlV 110 (275)
T 1wta_A 38 TPYGNPSDFIVVGDVAGVKVAF-----LPRHGRGHRIPPHAINYR-ANIWALKALGVKWVISVSAVGSLR-EDYRPGDFV 110 (275)
T ss_dssp CTTCCCSSCEEEEEETTEEEEE-----EETTTTTTCSCGGGCCHH-HHHHHHHHHTCCEEEEEEEEEESS-TTSCTTCEE
T ss_pred EecCCCcceEEEEEECCEEEEE-----EECCCCCCccChhhhhHH-HHHHHHHHcCCCEEEEecceeccC-CCCCCCCEE
Confidence 33444 679999999999998 76 89211 2588887 788899999999999999999999 899999999
Q ss_pred EEcceeeccCC-CCCCCcccCCCCccCCC---CChhHh---------hcCcce-EEEEe--ecCceecChHhHHHHH-hC
Q 027878 82 LISDVAFHDRR-IPIPVFDLYGVGQRQAF---STPNLL---------RELNLK-VCKLS--TGDSLDMSSQDETSIT-AN 144 (217)
Q Consensus 82 i~~~~~~~d~~-~~~p~f~~y~~g~~p~~---~~~~l~---------~~~~~~-~G~i~--Sgd~~~~~~~~~~~l~-~~ 144 (217)
|++++++++.+ .....|+ +.....|.+ .|++|. .+.+++ .|+++ +||+|.+. +..++++ ++
T Consensus 111 i~~~~i~~~~~~~~~~~~~-~~g~~~~~~~~~~d~~L~~~l~~~a~~~g~~~~~~Gv~~~~~Gp~f~t~-ae~~~~~~~~ 188 (275)
T 1wta_A 111 VPDQFIDMTKNRRHYTFYD-GPVTVHVSMADPFCEDLRQRLIDSGRRLGYTVHERGTYVCIEGPRFSTR-AESRVWKDVF 188 (275)
T ss_dssp CCCEEEEECCCCSCSCSCC-SSSCBCCCCSSCSCHHHHHHHHHHHHHHTCCEESCCEEEEECCSSCCCH-HHHHHHHHTS
T ss_pred EEhHHhhhcCCCCccccCC-CCCcccCCCCcccCHHHHHHHHHHHHHcCCceecceEEEEecCCEecCH-HHHHHHHHHc
Confidence 99999999976 2111221 111112222 255553 156788 89886 88999865 4467888 78
Q ss_pred CCcEEcccchHHHHHHHhCCCCEEEEEeeecCCCCC-Cc-cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027878 145 DATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGD-KP-TAEEFMQNLVAVTAALEQSVSQVIDFING 211 (217)
Q Consensus 145 ~a~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~-~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~~~ 211 (217)
|+++||||+++++++|+++|+|+++|+.|||+++.. .+ +++++.+.++++++++.+.+..+|+.+..
T Consensus 189 GadaV~Me~a~ea~vA~~~gi~~~~i~~Vsd~a~~~~~~~~~~e~~~~~~~~~~~~~~lv~~~i~~l~~ 257 (275)
T 1wta_A 189 KADIIGMTLVPEINLACEAQLCYATLAMVTDYDVWADRPVTAEEVERVMISNVERARRMLYDVIPKLAG 257 (275)
T ss_dssp CCSEEESSHHHHHHHHHHTTCEEEEEEEEEECTTSSSSCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSS
T ss_pred CCEEEcccHHHHHHHHHHCCCCEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999864 44 89999999999999999999999998853
No 23
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=99.96 E-value=1.3e-28 Score=207.61 Aligned_cols=192 Identities=14% Similarity=0.093 Sum_probs=156.0
Q ss_pred EEecC--cEEEEEEEcceeEEEeeeeeEe-eCCCCc------CHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcc
Q 027878 8 IDVVG--HTCTQQEYEIHDLFFANLNLIL-SEVDSV------GTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIG 78 (217)
Q Consensus 8 ~~~~g--~~~~~G~~~~~~v~~~~v~~~~-~G~~gv------G~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~G 78 (217)
+.+++ .++|+|+++|++|.+ +. +| + ++++++ +..+++..++++.||++|+|||++ +++++|
T Consensus 34 ~~~g~p~~~~~~G~~~G~~V~~-----~~r~G---~gh~~~~~~v~~~-a~~~~l~~~Gv~~iI~~gaaG~l~-~~l~~G 103 (270)
T 2a8y_A 34 TPYGQPSDFITIGKIGNKSVAF-----LPRHG---RGHRIPPHKINYR-ANIWALKELGVRWVISVSAVGSLR-MDYKLG 103 (270)
T ss_dssp CTTCCCSSCEEEEEETTEEEEE-----EETTT---GGGCCCGGGCCHH-HHHHHHHHTTCCEEEEEEEEEESS-TTSCTT
T ss_pred EEecCCcceEEEEEECCEEEEE-----EECCC---CCCCcCchhhhhH-HHHHHHHHcCCCEEEEeeeeeccC-CCCCCC
Confidence 33444 679999999999998 66 88 7 588887 788899999999999999999999 899999
Q ss_pred cEEEEcceeeccCCCCCCCcccCCCCccCCC---CChhHh---------hcCcce-EEEEe--ecCceecChHhHHHHH-
Q 027878 79 DVFLISDVAFHDRRIPIPVFDLYGVGQRQAF---STPNLL---------RELNLK-VCKLS--TGDSLDMSSQDETSIT- 142 (217)
Q Consensus 79 Dvvi~~~~~~~d~~~~~p~f~~y~~g~~p~~---~~~~l~---------~~~~~~-~G~i~--Sgd~~~~~~~~~~~l~- 142 (217)
|+||++++++++.+.....|+ +.....|.+ .|++|. .+.+++ .|+++ +||+|.+. +..++++
T Consensus 104 DlVi~~~~i~~~~~~~~~~~~-~~g~~~~~~~~~~d~~L~~~~~~~a~~~g~~~~~~Gv~~~~~Gp~fet~-ae~~~~~~ 181 (270)
T 2a8y_A 104 DFVIPDQFIDMTKNREYSFFD-GPVVAHVSMADPFCNSLRKLAIETAKELNIKTHESGTYICIEGPRFSTR-AESRTWRE 181 (270)
T ss_dssp CEECCCEEEEECCSCCCCSCC-SSSCBCCCCSSCSCHHHHHHHHHHHHHHTCCEESCCEEEEECCSSCCCH-HHHHHHHH
T ss_pred CEEEEhHHhhccCCCCCcccC-CCCCccCCCCcccCHHHHHHHHHHHHHcCCeEEcceEEEEecCCEecCH-HHHHHHHH
Confidence 999999999988763111222 111112222 255553 156788 89886 88999865 4467888
Q ss_pred hCCCcEEcccchHHHHHHHhCCCCEEEEEeeecCCCC-CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027878 143 ANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG-DKP-TAEEFMQNLVAVTAALEQSVSQVIDFING 211 (217)
Q Consensus 143 ~~~a~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~-~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~~~ 211 (217)
++|+++||||+++++++|+++|+|+++|+.|||+++. +.+ +++++.+.++++++++.+.+..+|+.+..
T Consensus 182 ~~GadaV~Me~a~ea~vA~~~gi~~~~i~~Vsd~a~~~~~~~~~ee~~~~~~~~~~~~~~lv~~~i~~l~~ 252 (270)
T 2a8y_A 182 VYKADIIGMTLVPEVNLACEAQMCYATIAMVTDYDVFAEIPVTAEEVTRVMAENTEKAKKLLYALIQKLPE 252 (270)
T ss_dssp TTCCCEEESSHHHHHHHHHHTTCEEEEEEEEEECTTSSSSCCCHHHHHHHHHHTHHHHHHHHHHHHHHCCS
T ss_pred HcCCEEECCcHHHHHHHHHHCCCCEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 7899999999999999999999999999999999986 344 89999999999999999999999999853
No 24
>1ybf_A AMP nucleosidase; structural genomics, protein structure initiative, PSI, NEW research center for structural genomics, nysgxrc; 2.90A {Bacteroides thetaiotaomicron} SCOP: c.56.2.1
Probab=99.96 E-value=1.2e-28 Score=207.73 Aligned_cols=148 Identities=17% Similarity=0.150 Sum_probs=124.6
Q ss_pred EEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcceeeccCCCCCCCc
Q 027878 19 EYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVF 98 (217)
Q Consensus 19 ~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~~~d~~~~~p~f 98 (217)
+|+|++|.+ +.+| ||+++++++ .+++..++|+.||++|+|||++ +++++||+||++.++++|....
T Consensus 58 ~~~g~~V~v-----~~~G---~G~~~aa~~-~~~l~~~gv~~iI~~GtaGgl~-~~i~~GDvVi~~~~i~~d~~~~---- 123 (268)
T 1ybf_A 58 NASAEGVTL-----INFG---MGSANAATI-MDLLWAIHPKAVIFLGKCGGLK-LENALGDYLLPIAAIRGEGTSN---- 123 (268)
T ss_dssp BCCCSSEEE-----EECC---SCHHHHHHH-HHHTTTTCCSEEEEEEEECCSS-CTTCTTCEEEEEEEEECSSTGG----
T ss_pred eECCeEEEE-----EECC---CCHHHHHHH-HHHHHHcCCCEEEEEEeeecCC-CCCCCCcEEEEhhheecCCCcc----
Confidence 789999988 8899 999999887 5677889999999999999999 7999999999999998886422
Q ss_pred ccCCCCccCCCCChhHh---------hcCcceEEEEeecCceec--ChHhHHHHHhCCCcEEcccchHHHHHHHhCCCCE
Q 027878 99 DLYGVGQRQAFSTPNLL---------RELNLKVCKLSTGDSLDM--SSQDETSITANDATIKDMEGAAVAYVADLFKVPA 167 (217)
Q Consensus 99 ~~y~~g~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~--~~~~~~~l~~~~a~~vdME~aava~~a~~~~ip~ 167 (217)
.|.+++.|..++..|. .+++++.|+++|+|.|+. +++.+++|++.++++||||+++++++|+.+++|+
T Consensus 124 -~~~~~~~p~~~~~~l~~~l~~~a~~~~~~~~~G~~~s~d~f~~e~~~e~~~~l~~~g~~~veMEsaal~~~a~~~gv~~ 202 (268)
T 1ybf_A 124 -DYLPEEVPSLPSFSVLRAISSAIQNKGKDYWTGTVYTTNRRVWEYDEKFKDYLRSTHASGVDMETATLMTVGFANKIPM 202 (268)
T ss_dssp -GTSCTTSCBCCCHHHHHHHHHHHHTTTCCEEEEEEEECSCCCCTTCHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCE
T ss_pred -cccCCccCCCCCHHHHHHHHHHHHHcCCCEEEEEEEEeCCCccCCCHHHHHHHHHcCCeEEecCHHHHHHHHHHcCCCE
Confidence 2444555544554442 146889999999999876 4555677888899999999999999999999999
Q ss_pred EEEEeeecCCCCCC
Q 027878 168 LFVKAVTDLVDGDK 181 (217)
Q Consensus 168 ~~ir~ISD~~~~~~ 181 (217)
++||+|||+++..+
T Consensus 203 ~~i~~VsD~~~~~~ 216 (268)
T 1ybf_A 203 GALLLISDRPMFPE 216 (268)
T ss_dssp EEEEEECSCSSCCS
T ss_pred EEEEEEEcCCCCcc
Confidence 99999999998755
No 25
>3p0f_A Uridine phosphorylase 2; transferase; HET: BAU; 1.54A {Homo sapiens} PDB: 3p0e_A* 2xrf_A
Probab=99.96 E-value=4.2e-29 Score=213.09 Aligned_cols=183 Identities=16% Similarity=0.084 Sum_probs=140.1
Q ss_pred EEecCcEEEEE---EEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcC-----CCEEEEEeeecccCCCCCCccc
Q 027878 8 IDVVGHTCTQQ---EYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALK-----PDLIINAGTAGGFKAKGASIGD 79 (217)
Q Consensus 8 ~~~~g~~~~~G---~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~-----~~~ii~~G~aG~l~~~~~~~GD 79 (217)
.+++++.+|+| +|+|++|++ +.|| ||+++|++++++|+..++ ++.||++|+|||++ +++||
T Consensus 72 ~~~r~~~~~tG~y~~ykG~~Vsv-----~~tG---iG~psaaI~~~ELi~~~~~~~~~~~~iIriGtaGgl~---l~vGD 140 (297)
T 3p0f_A 72 EDIKDICAGTDRYCMYKTGPVLA-----ISHG---MGIPSISIMLHELIKLLHHARCCDVTIIRIGTSGGIG---IAPGT 140 (297)
T ss_dssp CCTTSCCTTSSSCCEEEETTEEE-----EECC---SSHHHHHHHHHHHHHHHHHTTCBSCEEEEEEEEEESS---SCTTC
T ss_pred ceecceEEEEEEEeeECCeEEEE-----EECC---CCHHHHHHHHHHHHHhccccccCcceEEEEEeecccc---ccCCc
Confidence 46788899999 689999999 9999 999999999999999873 78999999999997 99999
Q ss_pred EEEEcceeeccCCCCCCCcccCCCCc---cCCCCChhHh---------h-cCcceEEEEeecCceecChHh---------
Q 027878 80 VFLISDVAFHDRRIPIPVFDLYGVGQ---RQAFSTPNLL---------R-ELNLKVCKLSTGDSLDMSSQD--------- 137 (217)
Q Consensus 80 vvi~~~~~~~d~~~~~p~f~~y~~g~---~p~~~~~~l~---------~-~~~~~~G~i~Sgd~~~~~~~~--------- 137 (217)
+||++.+++... .|.+..+..+. .|..+|+.|. . +.+++.|.++|+|.|+.+.+.
T Consensus 141 vVIa~~av~~~~---~~~~~~~~~~~~~~~~~~ad~~L~~~l~~aa~~~~~~~~~~G~~~S~D~Fy~~q~r~~~~~~~~~ 217 (297)
T 3p0f_A 141 VVITDIAVDSFF---KPRFEQVILDNIVTRSTELDKELSEELFNCSKEIPNFPTLVGHTMCTYDFYEGQGRLDGALCSFS 217 (297)
T ss_dssp EEEEEEEECTTS---CSEEEEEETTEEEEEECBCCHHHHHHHHHHHHTSTTCCEEEEEEEECSCSSGGGTCSSSSCCCSC
T ss_pred EEeechhhhccc---cccccccccCcccccccCCCHHHHHHHHHHHHhcCCCCeEEEEEEECCccccCCcccccccccch
Confidence 999999985321 12221111121 1223565553 1 468999999999999975431
Q ss_pred -------HHHHHhCCCcEEcccchHHHHHHHhCCCCEEEEEeeecCCCCC-Cc-cHHHHHHHHHHHHHHHHHHHHHHHH
Q 027878 138 -------ETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDGD-KP-TAEEFMQNLVAVTAALEQSVSQVID 207 (217)
Q Consensus 138 -------~~~l~~~~a~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~-~~-~~~~~~~~~~~a~~~~~~~l~~~l~ 207 (217)
.+.++++++.++|||+||++++|+.+|+|+++|+.|||..... .. ++++|...+++.++.+ +..+|+
T Consensus 218 ~~~k~~~~~~~~~~gv~avEMEsAAl~~va~~~gv~a~~i~~isdnr~~~~~~~~~~~~~~~~~~~~~~l---v~~~i~ 293 (297)
T 3p0f_A 218 REKKLDYLKRAFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRPQLL---ISNFIR 293 (297)
T ss_dssp HHHHHHHHHHHHHHTEEEEESSHHHHHHHHHHTTCEEEEEEEEEEETTTCSSCCCCHHHHHHHHTHHHHH---HHHHHH
T ss_pred hhhHHHHHHHHHHcCcEEEehHHHHHHHHHHHcCCcEEEEEEEEcCccCCCcccChHHHHHHHHHHHHHH---HHHHHH
Confidence 2334557999999999999999999999999999999988553 33 6788877766666544 444444
No 26
>3qpb_A Uridine phosphorylase; hexamer, NP-I superfamily, pyrimidine salvage pathway, uridi phosphorylase, transition state; HET: R1P; 1.82A {Streptococcus pyogenes serotype M6}
Probab=99.96 E-value=6e-29 Score=210.85 Aligned_cols=156 Identities=15% Similarity=0.067 Sum_probs=129.8
Q ss_pred EecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcceee
Q 027878 9 DVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVAF 88 (217)
Q Consensus 9 ~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~~ 88 (217)
+.+++.+|+|+|+|++|.+ +.+| ||+++|+++++.|+. ++++.||++|+|||++ +++++||+||++.+++
T Consensus 72 ~~r~~~~~tG~~~g~~V~v-----~~~G---~G~~~aa~~~~~L~~-~g~~~iI~~G~aGgl~-~~~~~GDvVi~~~ai~ 141 (282)
T 3qpb_A 72 DSREYVTYTGTLNGEKVSV-----TSTG---IGGPSASIAMEELKL-CGADTFIRVGTCGGIE-LDVKGGDIVIATGAIR 141 (282)
T ss_dssp EETTEEEEEEEETTEEEEE-----ECCC---SSHHHHHHHHHHHHH-TTCCEEEEEEEEEECS-TTCCTTCEEEEEEEEE
T ss_pred ccCCeeEEEEEECCEEEEE-----EeCC---CCHHHHHHHHHHHHH-cCCCEEEEeeeeecCC-CCCCCCcEEEeeeeee
Confidence 4678999999999999999 7888 999999999999988 9999999999999999 7999999999999998
Q ss_pred ccCCCCCCCcccCCCCccCCCCChhHh---------hcCcceEEEEeecCceecCh---------Hh---HHHHHhCCCc
Q 027878 89 HDRRIPIPVFDLYGVGQRQAFSTPNLL---------RELNLKVCKLSTGDSLDMSS---------QD---ETSITANDAT 147 (217)
Q Consensus 89 ~d~~~~~p~f~~y~~g~~p~~~~~~l~---------~~~~~~~G~i~Sgd~~~~~~---------~~---~~~l~~~~a~ 147 (217)
+|. .. + .|.++..|..+|+.|. .+.+++.|.++|+|.|+.+. +. .+.+++.|++
T Consensus 142 ~dg-~~-~---~y~~~~~p~~~d~~L~~~l~~~a~~~g~~~~~G~~~s~D~Fy~q~~~~~~~~~~e~~~~~~~~~~~Ga~ 216 (282)
T 3qpb_A 142 MEG-TS-K---EYAPIEFPAVADLEVTNALVNAAKKLGYTSHAGVVQCKDAFYGQHEPERMPVSYELLNKWEAWKRLGTK 216 (282)
T ss_dssp ESS-TG-G---GTSCTTSCEECCHHHHHHHHHHHHHHTCCEEEEEEEEESCHHHHHCGGGSTTHHHHHHHHHHHHHTTCC
T ss_pred cCC-cc-c---ccCCCccCCCCCHHHHHHHHHHHHHcCCCEEEEEEEEecceecccccccccccHhHHHHHHHHHHcCCe
Confidence 874 22 2 3444444544566553 25789999999999998522 22 2344568999
Q ss_pred EEcccchHHHHHHHhCCCCEEE-EEeeecCCCC
Q 027878 148 IKDMEGAAVAYVADLFKVPALF-VKAVTDLVDG 179 (217)
Q Consensus 148 ~vdME~aava~~a~~~~ip~~~-ir~ISD~~~~ 179 (217)
+||||+++++++|+.+|+|+++ +++|+|.+++
T Consensus 217 aVEMEsaala~vA~~~gi~~~~il~visn~~~~ 249 (282)
T 3qpb_A 217 ASEMESAALFVAASHLGVRCGSDFLVVGNQERN 249 (282)
T ss_dssp EECSSHHHHHHHHHHHTCEEEEEEEEEEEHHHH
T ss_pred EEeccHHHHHHHHHHcCCCEEEEEEEEEccccc
Confidence 9999999999999999999999 7889998654
No 27
>3euf_A Uridine phosphorylase 1; nucleoside phosphorylase, uridine rescue, 5- benzylacyclouridine, alternative splicing, glycosyltransferase, transferase; HET: BAU; 1.90A {Homo sapiens} PDB: 3eue_A* 3nbq_A 3ku4_A 3kuk_A* 3kvr_A 3kvy_A
Probab=99.96 E-value=1.8e-28 Score=211.48 Aligned_cols=185 Identities=16% Similarity=0.102 Sum_probs=138.0
Q ss_pred EEecCcEEEEE---EEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHh---cCCC--EEEEEeeecccCCCCCCccc
Q 027878 8 IDVVGHTCTQQ---EYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQA---LKPD--LIINAGTAGGFKAKGASIGD 79 (217)
Q Consensus 8 ~~~~g~~~~~G---~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~---~~~~--~ii~~G~aG~l~~~~~~~GD 79 (217)
-+.+++.+|+| +|+|++|++ +.|| ||++||++++++|+.. |+++ .||++|+|||++ +++||
T Consensus 101 ~~~R~~~~~tG~y~~ykG~~Vsv-----~stG---IG~psaaI~~~ELi~~~~~~gv~~~~iIriGtaGgl~---l~vGD 169 (328)
T 3euf_A 101 RDYPNICAGTDRYAMYKVGPVLS-----VSHG---MGIPSISIMLHELIKLLYYARCSNVTIIRIGTSGGIG---LEPGT 169 (328)
T ss_dssp CCCCCTTTTCCSCCEEEETTEEE-----EECC---SSHHHHHHHHHHHHHHHHHTTCBSCEEEEEEEEEESS---SCTTC
T ss_pred ccccceEEEecceeEECCEEEEE-----EECC---CCHHHHHHHHHHHHHhhhhcCCCccEEEEEeeecCcC---CcCCc
Confidence 35678889999 999999999 9999 9999999999999996 6776 999999999993 89999
Q ss_pred EEEEcceeeccCCCCCCCcccCCCC---ccCCCCChhHh---------h-cCcceEEEEeecCceecChHh---------
Q 027878 80 VFLISDVAFHDRRIPIPVFDLYGVG---QRQAFSTPNLL---------R-ELNLKVCKLSTGDSLDMSSQD--------- 137 (217)
Q Consensus 80 vvi~~~~~~~d~~~~~p~f~~y~~g---~~p~~~~~~l~---------~-~~~~~~G~i~Sgd~~~~~~~~--------- 137 (217)
+||++.+++.|. . +.+..+..| ..|..+|+.|. . +.+++.|.++|+|.|+.+.+.
T Consensus 170 vVIa~~av~~d~-t--~~~~~~~~g~~~~~p~~aD~~L~~~l~~aa~~~~~~~~~~G~~~S~D~Fy~~q~r~~~~~~~~~ 246 (328)
T 3euf_A 170 VVITEQAVDTCF-K--AEFEQIVLGKRVIRKTDLNKKLVQELLLCSAELSEFTTVVGNTMCTLDFYEGQGRLDGALCSYT 246 (328)
T ss_dssp EEEEEEEECTTS-C--SEEEEEETTEEEEEECCCCHHHHHHHHHHHHHHCSSCEEEEEEEECSCSSGGGTCSCSSBCCSC
T ss_pred EEEecceecCCC-c--cchhhhhcCCCCccCCCCCHHHHHHHHHHHHhccCCCeEEEEeeccCccccCccccccccccch
Confidence 999999986443 2 122110112 23333566653 1 578999999999999976431
Q ss_pred -------HHHHHhCCCcEEcccchHHHHHHHhCCCCEEEEEeeecCCCC-CCc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027878 138 -------ETSITANDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG-DKP-TAEEFMQNLVAVTAALEQSVSQVIDF 208 (217)
Q Consensus 138 -------~~~l~~~~a~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~-~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~ 208 (217)
.++++++++.++|||+||++++|+.+|+|+++||+|||.... +.. +++++...+.+.+ .+.+.++|+.
T Consensus 247 ~~~k~~~~~~~~~~gv~avEMEsAAla~va~~~gv~a~~I~~isdnr~~ge~~~~~~e~l~~~~~~~---~~~v~~~ik~ 323 (328)
T 3euf_A 247 EKDKQAYLEAAYAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQRP---QRLVSYFIKK 323 (328)
T ss_dssp HHHHHHHHHHHHHTTEEEEESSHHHHHHHHHHTTCEEEEEEEEEEETTSCSSCCSCHHHHHHHHTHH---HHHHHHHHHH
T ss_pred hhhHHHHHHHHHHcCCEEEehHHHHHHHHHHHcCCcEEEEEEEEccccCCccCCCcHHHHHHHHHHH---HHHHHHHHHH
Confidence 223456899999999999999999999999999999997743 332 4566654433333 3445555544
Q ss_pred h
Q 027878 209 I 209 (217)
Q Consensus 209 ~ 209 (217)
.
T Consensus 324 ~ 324 (328)
T 3euf_A 324 K 324 (328)
T ss_dssp H
T ss_pred H
Confidence 3
No 28
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa}
Probab=99.95 E-value=6.1e-27 Score=196.00 Aligned_cols=182 Identities=14% Similarity=0.164 Sum_probs=143.3
Q ss_pred cEEEEEEEcceeEEEeeeeeEe-eCCCCcC------HHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcc
Q 027878 13 HTCTQQEYEIHDLFFANLNLIL-SEVDSVG------TISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISD 85 (217)
Q Consensus 13 ~~~~~G~~~~~~v~~~~v~~~~-~G~~gvG------~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~ 85 (217)
-+++.|+++|++|.+ +. +| .| ++++++ ..+++..++++.||++|+|||++ +++++||+||+++
T Consensus 49 ~~l~~G~l~G~~Vv~-----l~rhG---~gh~~~~~~V~~~a-~i~~l~~~Gv~~II~tgaaGgl~-~~l~~GDlVi~~d 118 (259)
T 3ozb_A 49 APLQRGRYAGREVLF-----LARHG---HPHRFPPHQVNYRA-NLWALKQAGAEAVIAVNAVGGIH-AAMGTGHLCVPHQ 118 (259)
T ss_dssp SCBEEEEETTEEEEE-----EESSC---C---CCGGGSCHHH-HHHHHHHHTCSEEEEEEEEEECS-TTSCTTCEECCSE
T ss_pred ceEEEEEECCEEEEE-----EeCcC---CCcccChhhcchHH-HHHHHHHcCCCEEEEccceeecc-cccCCCCEEEehh
Confidence 468999999999988 54 68 77 676664 57888999999999999999999 8999999999999
Q ss_pred eeeccCCCCCCCcccCC-CC-ccCCC---CChhHh---------hcCc-ceEEE--EeecCceecChHhHHHHHhCCCcE
Q 027878 86 VAFHDRRIPIPVFDLYG-VG-QRQAF---STPNLL---------RELN-LKVCK--LSTGDSLDMSSQDETSITANDATI 148 (217)
Q Consensus 86 ~~~~d~~~~~p~f~~y~-~g-~~p~~---~~~~l~---------~~~~-~~~G~--i~Sgd~~~~~~~~~~~l~~~~a~~ 148 (217)
.++++.+.....|+ +. .+ ..|.+ .|++|. .+++ ++.|+ +.+||+|.+.++ .+++++.|+++
T Consensus 119 ~i~~~~~~~~t~~~-~~~~~~~~~~~~~~~d~~L~~~~~~~a~~~gi~~~~~Gvy~~~~Gp~fet~aE-~~~~~~~Gada 196 (259)
T 3ozb_A 119 LIDYTSGREHTYFA-GDIEHVTHIDFSHPYDEPLRQRLIEALRALGLAHSSHGVYACTQGPRLETVAE-IARLERDGNDI 196 (259)
T ss_dssp EEECCCSSCCCSSS-SSCSSCCCCCCSSCSCHHHHHHHHHHHHHTTCCEESCCEEEECCCSSCCCHHH-HHHHHHTTCSE
T ss_pred hcccCCCCCCcCCC-CcccCCCcCccCCCCCHHHHHHHHHHHHHcCCCeEeeeEEEEEeCCccCCHHH-HHHHHHcCCEE
Confidence 99988643211222 11 11 11111 255553 1455 67887 568899976555 46778899999
Q ss_pred EcccchHHHHHHHhCCCCEEEEEeeecCCCCC--Cc-cHHHHHHHHHHHHHHHHHHHHHHH
Q 027878 149 KDMEGAAVAYVADLFKVPALFVKAVTDLVDGD--KP-TAEEFMQNLVAVTAALEQSVSQVI 206 (217)
Q Consensus 149 vdME~aava~~a~~~~ip~~~ir~ISD~~~~~--~~-~~~~~~~~~~~a~~~~~~~l~~~l 206 (217)
||||+++++++|+++|+|+++|+.|||++... .+ +++++.+.++++++++.+.+..++
T Consensus 197 VgMe~~~ea~vA~~~gi~~~~I~~ISD~a~~~~~~~~s~eev~~~a~~~~~~~~~l~~~~i 257 (259)
T 3ozb_A 197 VGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHDGIGKVREVLARVL 257 (259)
T ss_dssp EESSSTTHHHHHHHTTCCEEEEEEEEEECTTTSSSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcCcHHHHHHHHHHcCCCeEEEEEEEeCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999863 33 899999999999999999888776
No 29
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=99.95 E-value=2.1e-26 Score=195.03 Aligned_cols=185 Identities=10% Similarity=0.110 Sum_probs=146.9
Q ss_pred EEEEEEEcceeEEEeeeeeEeeCCCCcCHHH------HHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEccee
Q 027878 14 TCTQQEYEIHDLFFANLNLILSEVDSVGTIS------ASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVA 87 (217)
Q Consensus 14 ~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~------Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~ 87 (217)
.++.|+++|++|.+ +. | .|... ...+..+++..++++.||++|+|||++ +++++||+||+++.+
T Consensus 76 ~l~~G~l~G~~Vv~-----l~-G---r~H~~eg~~~~~~~a~i~~l~~lGv~~II~tgaaGgl~-~~l~~GDlVi~~d~i 145 (287)
T 3odg_A 76 ELVLGDLCGVPVMC-----MK-G---RGHFYEGKGMSIMTNPVRTFKLMGCEFLFCTNAAGSLR-PEVLPGSVVMLKDHI 145 (287)
T ss_dssp EEEEEEETTEEEEE-----EE-S---CCCGGGTTCGGGGHHHHHHHHHTTCSEEEEEEEEEESS-TTSCTTCEEEEEEEE
T ss_pred eEEEEEECCEEEEE-----EE-C---CCcccCCCCHHHHHHHHHHHHHcCCCEEEEecceeccC-CCCCCCCEEEehhhh
Confidence 69999999999998 55 8 77542 345556788999999999999999999 899999999999999
Q ss_pred eccCCCCCCCcccCCCC-ccCCC---CChhHh---------hcCcceEEEE--eecCceecChHhHHHHHhCCCcEEccc
Q 027878 88 FHDRRIPIPVFDLYGVG-QRQAF---STPNLL---------RELNLKVCKL--STGDSLDMSSQDETSITANDATIKDME 152 (217)
Q Consensus 88 ~~d~~~~~p~f~~y~~g-~~p~~---~~~~l~---------~~~~~~~G~i--~Sgd~~~~~~~~~~~l~~~~a~~vdME 152 (217)
+++.....-+++...+| ..|.+ .|++|. .+++++.|++ .+||+|.+.++ .+++++.|+++|+||
T Consensus 146 ~~t~~~p~~g~~~~~~G~~~~~~~~~~d~~L~~~a~~aA~~~gi~~~~Gvy~~~~Gp~feT~AE-~~~~r~~GadaVgMe 224 (287)
T 3odg_A 146 NTMPGTPLVGPNDDRFGPRFFSLANAYDKDLRADMAKIAQQLDIPLTEGVFVSYPGPCFETPAE-IRMMQIIGGDVVGMS 224 (287)
T ss_dssp CCSSSCTTCSSCCTTTCCSSCCCTTSSCHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHH-HHHHHHTTCSEEESS
T ss_pred hccCCCCccCCCccccCCCCCCCCccCCHHHHHHHHHHHHHCCCCEEEEEEEEecCCccCCHHH-HHHHHHcCCEEEeCc
Confidence 88754210011111112 11211 255553 2578899986 57899976555 467888999999999
Q ss_pred chHHHHHHHhCCCCEEEEEeeecCCCC--CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 153 GAAVAYVADLFKVPALFVKAVTDLVDG--DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 153 ~aava~~a~~~~ip~~~ir~ISD~~~~--~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
+++++++|+++|+|+++|+.|||++.. +.+ +++++.+.++++++++.+.+..+|+.+
T Consensus 225 ~~pea~vA~~~gi~~~~I~~VSD~a~g~~~~~~s~eev~~~a~~~~~~~~~ll~~~i~~~ 284 (287)
T 3odg_A 225 VVPEVLSAAHCGLKVIALTAITNLAEGLSDVVLSHEQTLKFAKVASVNFTKLIEAFLKSK 284 (287)
T ss_dssp SHHHHHHHHHHTCEEEEEEEEEEECTTSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 334 899999999999999999999999887
No 30
>3bje_A Nucleoside phosphorylase, putative; uridine phosphorylase, structural medical structural genomics of pathogenic protozoa consorti MSGPP; HET: R1P; 1.44A {Trypanosoma brucei}
Probab=99.95 E-value=8.1e-27 Score=202.65 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=132.6
Q ss_pred eEEecCcEEEEEEEcceeEEEeeeeeEeeCCCCcCHHHHHHHHHHHHHh--c-------------------------CCC
Q 027878 7 DIDVVGHTCTQQEYEIHDLFFANLNLILSEVDSVGTISASLVTYASIQA--L-------------------------KPD 59 (217)
Q Consensus 7 ~~~~~g~~~~~G~~~~~~v~~~~v~~~~~G~~gvG~~~Aa~~~~~li~~--~-------------------------~~~ 59 (217)
..+.+++.+|+|+|+|++|++ +.|| ||++|+++++++|+.. | +++
T Consensus 70 ~~~~R~~~~~tG~ykG~~Vsv-----~stG---mG~psaaI~~~ELi~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~ 141 (349)
T 3bje_A 70 SRDHREIRFATGTYKGTPVTV-----ISTG---MGVDNIEIVLNEIHALKEYDMERGQWRHRKGDADAPSAGPFFDPSTM 141 (349)
T ss_dssp EEEETTEEEEEEEETTEEEEE-----EECC---SSHHHHHHHHHHHHHHHHEETTTTEECBCTTCTTSCTTCCBCCGGGC
T ss_pred EEeecCeEEEEEEECCEEEEE-----EECC---CCHHHHHHHHHHHHHHhhcccccccccccccccccccccccccCCCc
Confidence 567899999999999999999 9999 9999999999999987 5 599
Q ss_pred EEEEEeeecccCCCCCCcccEEEEcceeeccCCCCCCCcccCCC-----------------Ccc------C--CCCChhH
Q 027878 60 LIINAGTAGGFKAKGASIGDVFLISDVAFHDRRIPIPVFDLYGV-----------------GQR------Q--AFSTPNL 114 (217)
Q Consensus 60 ~ii~~G~aG~l~~~~~~~GDvvi~~~~~~~d~~~~~p~f~~y~~-----------------g~~------p--~~~~~~l 114 (217)
.||++|+|||++ +++++||+||++.++++|.... | |.+ ++. | ..+++.|
T Consensus 142 ~iIrvGT~Ggl~-~~l~vGdvVI~~~ai~~Dg~~~---~--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ad~~L 215 (349)
T 3bje_A 142 KIIRLGTCGSPA-ESVPPLALAVTRHAIGMDNTSL---Y--YSAGTRETSKDQQEIRRIVREQTGLRAIDIYTSMAHPNI 215 (349)
T ss_dssp EEEEEEEEEECC-TTSCTTCEEEEEEEEECSCGGG---G--GTTTTSCCCHHHHHHHHHHHHHSGGGGSCCEEEECCHHH
T ss_pred EEEEeecccCCC-CCCCCCCEEEEeeeEeccCccc---c--cccccccccccchhhhcccccccccCCCCcccCcCCHHH
Confidence 999999999999 8999999999999998887532 1 221 111 1 1245555
Q ss_pred hh---------c---------CcceEEEEeecCceecChHh--------------HHHHH---------hCCCcEEcccc
Q 027878 115 LR---------E---------LNLKVCKLSTGDSLDMSSQD--------------ETSIT---------ANDATIKDMEG 153 (217)
Q Consensus 115 ~~---------~---------~~~~~G~i~Sgd~~~~~~~~--------------~~~l~---------~~~a~~vdME~ 153 (217)
.+ + .+++.|.++|+|.|+.+... .++|. ++++.++|||+
T Consensus 216 ~~~l~~aa~~~~~~~~~~~~~~~~~~G~t~S~D~Fy~~q~r~~grf~~~~~~~~~~~kl~~~~~~~~~~~~gv~~vEMEs 295 (349)
T 3bje_A 216 TKSICAACDAHNAATGSEADKQQYVIGTTATASGFYGCQGRRVGRFMKHLTVPNMVEELGSLKFNLSNGVEVVTNIEMET 295 (349)
T ss_dssp HHHHHHHHHHHHHTCCCGGGCCCEEEEEEEECSSSSGGGTCCCGGGGGGCSSTTHHHHHHHCCEEETTEEECEEEEESSH
T ss_pred HHHHHHHHHHcCCccccccccccEEEEEEEECCccccCCcccccccccccccHHHHHHHHHhhhcchhhhcCcEEEECcH
Confidence 31 2 68999999999999976431 13443 46999999999
Q ss_pred hHHHHHHHhCCCCEEEEEeeecCCCCCC
Q 027878 154 AAVAYVADLFKVPALFVKAVTDLVDGDK 181 (217)
Q Consensus 154 aava~~a~~~~ip~~~ir~ISD~~~~~~ 181 (217)
+|++++|+.+|+|+++|++|||......
T Consensus 296 aal~~la~~~g~~a~~i~~Vsdn~~~~~ 323 (349)
T 3bje_A 296 SAICYLSDMLGYQAGAACVVVSKRVGEK 323 (349)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEESSTTC
T ss_pred HHHHHHHHHcCCCEEEEEEEEccCCCCc
Confidence 9999999999999999999999987654
No 31
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=99.95 E-value=6.2e-26 Score=190.78 Aligned_cols=180 Identities=17% Similarity=0.196 Sum_probs=147.9
Q ss_pred cEEEEEEEcceeEEEeeeeeEeeCCCCcC------HHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcce
Q 027878 13 HTCTQQEYEIHDLFFANLNLILSEVDSVG------TISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDV 86 (217)
Q Consensus 13 ~~~~~G~~~~~~v~~~~v~~~~~G~~gvG------~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~ 86 (217)
-+++.|+++|++|.+ + .| +| ++++..+..+++..++++.||++|.|||++ +++++||+||++++
T Consensus 70 ~~~~~G~l~G~~V~~-----~-~G---~gh~~~~~~v~~~~a~i~~l~~lGv~~iI~tgaaG~l~-~~l~~GDlVi~~d~ 139 (268)
T 1g2o_A 70 GELLSVPIGAHRVLV-----L-AG---RIHAYEGHDLRYVVHPVRAARAAGAQIMVLTNAAGGLR-ADLQVGQPVLISDH 139 (268)
T ss_dssp CEEEEEEETTEEEEE-----E-EC---CCCGGGTCCHHHHSHHHHHHHHTTCCEEEEEEEEEECS-TTCCTTCEEEEEEE
T ss_pred CeEEEEEECCEEEEE-----E-EC---CCcCCCCCCHHHHHHHHHHHHHcCCCEEEEecceecCC-CCCCCCCEEEEhHH
Confidence 369999999999988 5 48 88 788777778999999999999999999999 89999999999999
Q ss_pred eeccCCCCCCCcccCCCCccCCC---CChhHhh-----cCcceEEE--EeecCceecChHhHHHHHhCCCcEEcccchHH
Q 027878 87 AFHDRRIPIPVFDLYGVGQRQAF---STPNLLR-----ELNLKVCK--LSTGDSLDMSSQDETSITANDATIKDMEGAAV 156 (217)
Q Consensus 87 ~~~d~~~~~p~f~~y~~g~~p~~---~~~~l~~-----~~~~~~G~--i~Sgd~~~~~~~~~~~l~~~~a~~vdME~aav 156 (217)
++++.. + | |. +. ..|.+ .|++|.+ ...++.|+ +.+||+|.+. ...+++++.|+++||||++++
T Consensus 140 i~~t~~-~-~-~~-g~--~~~~~~~~~d~~L~~~~~~~a~~~~~Gvy~~~~Gp~feT~-aE~~~~~~~GadaVgMe~~~e 212 (268)
T 1g2o_A 140 LNLTAR-S-P-LV-GG--EFVDLTDAYSPRLRELARQSDPQLAEGVYAGLPGPHYETP-AEIRMLQTLGADLVGMSTVHE 212 (268)
T ss_dssp EECSSC-C-S-CC-SS--CCCCCTTSSCHHHHHHHHHHCTTCEEEEEEECCCSSCCCH-HHHHHHHHHTCSEEESSSHHH
T ss_pred hhccCC-C-c-CC-CC--CCCCCCcccCHHHHHHHHHHHHHhCCCeEEEEeCCEEeCH-HHHHHHHHcCCeEEecCHHHH
Confidence 998874 2 2 21 11 11222 2566542 12278887 7899998765 446777878999999999999
Q ss_pred HHHHHhCCCCEEEEEeeecCCCC--CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 157 AYVADLFKVPALFVKAVTDLVDG--DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 157 a~~a~~~~ip~~~ir~ISD~~~~--~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
+++|+++|+|+++|+.|||++.. +.+ +++++.+.++++++++.+.+..+|+.+
T Consensus 213 a~lA~~~gi~~~~i~~VtD~a~g~~~~~~s~eev~~~~~~~~~~~~~lv~~~i~~~ 268 (268)
T 1g2o_A 213 TIAARAAGAEVLGVSLVTNLAAGITGEPLSHAEVLAAGAASATRMGALLADVIARF 268 (268)
T ss_dssp HHHHHHTTCEEEEEEEEEEECTTSSCCCCCHHHHHHHHHTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEEEEecCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999975 233 899999999999999999999998764
No 32
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=99.94 E-value=1.4e-25 Score=195.26 Aligned_cols=187 Identities=12% Similarity=0.113 Sum_probs=150.4
Q ss_pred EEEEEEEcceeEEEeeeeeEeeCCCCcC------HHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEccee
Q 027878 14 TCTQQEYEIHDLFFANLNLILSEVDSVG------TISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVA 87 (217)
Q Consensus 14 ~~~~G~~~~~~v~~~~v~~~~~G~~gvG------~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~ 87 (217)
.++.|+++|++|.+ +. | +| +++++.+..+++..++++.||++|+|||++ +++++||+||+++++
T Consensus 152 ~l~~G~l~G~~Vvv-----m~-G---rgH~yeg~~v~~v~a~i~llk~lGV~~II~tgaaGgL~-~~l~pGDlVI~~d~I 221 (373)
T 2p4s_A 152 RLVFGYLAGVPVMC-----MQ-G---RFHHYEGYPLAKCAMPVRVMHLIGCTHLIATNAAGGAN-PKYRVGDIMLIKDHI 221 (373)
T ss_dssp EEEEEEETTEEEEE-----EE-S---CCCGGGTCCHHHHHHHHHHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEEE
T ss_pred eeEEEEECCEEEEE-----Ee-C---CCcCCCCCCHHHHHHHHHHHHHcCCCEEEEeccEeecC-CCCCCCCEEEEhHHh
Confidence 89999999999998 66 8 88 788877788999999999999999999999 899999999999999
Q ss_pred ec---cCCCCCCCcccCCCC-ccCCC---CChhHh-------h--cC--cceEEEEe--ecCceecChHhHHHHHhCCCc
Q 027878 88 FH---DRRIPIPVFDLYGVG-QRQAF---STPNLL-------R--EL--NLKVCKLS--TGDSLDMSSQDETSITANDAT 147 (217)
Q Consensus 88 ~~---d~~~~~p~f~~y~~g-~~p~~---~~~~l~-------~--~~--~~~~G~i~--Sgd~~~~~~~~~~~l~~~~a~ 147 (217)
++ ..+...-.++.+.++ ..|.+ .|++|. + ++ .++.|+++ +||+|.+.++ .++++..|++
T Consensus 222 d~dd~t~~~pl~g~~~~~~gv~~~~ms~~yd~~Lr~~a~~aA~~~gi~~~~~~Gvyv~~~GP~FeT~AE-~r~lr~~Gad 300 (373)
T 2p4s_A 222 NLMGFAGNNPLQGPNDERFGPRFFGMANTYDPKLNQQAKVIARQIGIENELREGVYTCLGGPNFETVAE-VKMLSMLGVD 300 (373)
T ss_dssp CHHHHTTCCTTCSCCCTTTCCSCBCCTTSBCHHHHHHHHHHHHHTTCGGGEEEEEEEECCCSSCCCHHH-HHHHHHTTCC
T ss_pred cCcCcCCCCCccccCccccCCCCCCCCccCCHHHHHHHHHHHHHcCCCcceeeEEEEEeeCCcccCHHH-HHHHHHcCCe
Confidence 88 322110012212222 11222 255553 1 34 57899886 6999987644 6677889999
Q ss_pred EEcccchHHHHHHHhCCCCEEEEEeeecCCCCC----Cc-cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027878 148 IKDMEGAAVAYVADLFKVPALFVKAVTDLVDGD----KP-TAEEFMQNLVAVTAALEQSVSQVIDFING 211 (217)
Q Consensus 148 ~vdME~aava~~a~~~~ip~~~ir~ISD~~~~~----~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~~~ 211 (217)
+|+||+++++++|+++++|+++|+.|||++... .+ +++++.+.++++++++.+.+..+|+.+..
T Consensus 301 aVgMetapEa~lAre~Gi~~~~I~~VTD~a~~~~~~~~~vs~eEvle~~~~~~~~~~~Lv~~~I~~l~~ 369 (373)
T 2p4s_A 301 AIGMSTVHEIITARHCGMTCFAFSLITNMCTMSYEEEEEHCHDSIVGVGKNREKTLGEFVSRIVKHIHY 369 (373)
T ss_dssp EEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSSCCCCCHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred EEecChHHHHHHHHHcCCCEEEEEEeecccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999742 33 89999999999999999999999998854
No 33
>1vmk_A Purine nucleoside phosphorylase; TM1596, structural genomics protein structure initiative, PSI, joint center for structu genomics; HET: GUN; 2.01A {Thermotoga maritima} SCOP: c.56.2.1
Probab=99.94 E-value=1.9e-25 Score=188.39 Aligned_cols=182 Identities=14% Similarity=0.155 Sum_probs=144.6
Q ss_pred cEEEEEEEcceeEEEeeeeeEeeCCCCcC---------HHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEE
Q 027878 13 HTCTQQEYEIHDLFFANLNLILSEVDSVG---------TISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLI 83 (217)
Q Consensus 13 ~~~~~G~~~~~~v~~~~v~~~~~G~~gvG---------~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~ 83 (217)
-+++.|+++|++|.+ +. | +| ++++ ..+++..++++.||++|.|||++ +++++||+||+
T Consensus 73 ~~l~~G~l~G~~Vv~-----~~-G---rgH~yeG~~p~~V~~---~i~~l~~lGv~~II~tgaaG~l~-~~l~~GDlVi~ 139 (277)
T 1vmk_A 73 GKLVFGRISDKPVMI-----MA-G---RFHLYEGHDPATVAF---PVYLAKYVGVKGVVVTNAAGAIN-PEFKPGEIILV 139 (277)
T ss_dssp CEEEEEEETTEEEEE-----EE-S---CCCGGGTCCHHHHHH---HHHHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEE
T ss_pred ceEEEEEECCEEEEE-----Ee-c---CCcccCCCCHHHHHH---HHHHHHHcCCCEEEEecceecCC-CCCCCCCEEEE
Confidence 369999999999998 66 8 77 6665 56888999999999999999999 89999999999
Q ss_pred cceeeccCCCCCCCcccCCCC-ccCCC---CChhHhh----cCcceEEEEe--ecCceecChHhHHHHHhCCCcEEcccc
Q 027878 84 SDVAFHDRRIPIPVFDLYGVG-QRQAF---STPNLLR----ELNLKVCKLS--TGDSLDMSSQDETSITANDATIKDMEG 153 (217)
Q Consensus 84 ~~~~~~d~~~~~p~f~~y~~g-~~p~~---~~~~l~~----~~~~~~G~i~--Sgd~~~~~~~~~~~l~~~~a~~vdME~ 153 (217)
++.++++.+...-.++.-+.| +.|.+ .|++|.+ +.+++.|+++ +||+|.+.++ .++++..|+++|+||+
T Consensus 140 ~d~i~~t~~~p~~g~~~~~~g~~~~~~~~~~d~~L~~~~a~~i~~~~Gvy~~~~Gp~feT~AE-~~~~r~~Gad~VgMe~ 218 (277)
T 1vmk_A 140 RDIINFMFRNPLRGPNDEKIGPRFPDMSSVVDPEWARKIQERLSLKEGVYIGVLGPSYETPAE-IRVFEKLGADLVGMST 218 (277)
T ss_dssp EEEEECSCCCTTCSCCCTTTCCSSCCCTTCSCHHHHHHHHHHHCCEEEEEEECCCSSCCCHHH-HHHHHHTTCSEEESSS
T ss_pred hHHHhhCCCCCcccCCCcccCcccCCCccccCHHHHHHHhhhCCCceEEEEEeeCCcccCHHH-HHHHHHcCCeEEecCh
Confidence 999999875211012111112 22222 2455542 2467899876 8999987644 6777889999999999
Q ss_pred hHHHHHHHhCCCCEEEEEeeecCCCCC--Cc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 027878 154 AAVAYVADLFKVPALFVKAVTDLVDGD--KP-TAEEFMQNLVAVTAALEQSVSQVIDF 208 (217)
Q Consensus 154 aava~~a~~~~ip~~~ir~ISD~~~~~--~~-~~~~~~~~~~~a~~~~~~~l~~~l~~ 208 (217)
++++++|+++++|+++|+.|||++... .+ +++++.+.++++++++.+.+..+|+.
T Consensus 219 ~pea~lAr~~gi~~~~I~~ITD~a~g~~~~~~s~eev~~~~~~~~~~~~~lv~~~i~~ 276 (277)
T 1vmk_A 219 VPEVIAAKHCGLKVVVFSCVTNMAAGITHGRLSHEEVVRTTKMAQGKIEKALTTAVEV 276 (277)
T ss_dssp HHHHHHHHHHTCEEEEEEEEEEECTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEEecCccCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999853 33 89999999999999999999998875
No 34
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=99.94 E-value=3.3e-25 Score=187.99 Aligned_cols=188 Identities=11% Similarity=0.094 Sum_probs=137.8
Q ss_pred cEEEEEEEcceeEEEeeeeeEeeCCCCcC------HHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEcce
Q 027878 13 HTCTQQEYEIHDLFFANLNLILSEVDSVG------TISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDV 86 (217)
Q Consensus 13 ~~~~~G~~~~~~v~~~~v~~~~~G~~gvG------~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~ 86 (217)
-.++.|+++|++|.+ +. | +| .+.......+++..++++.||++|+|||++ +++++||+||+++.
T Consensus 68 g~l~~G~l~G~~V~~-----~~-G---~gH~yeG~~p~~V~~~i~~l~~lGv~~iI~tgaaG~l~-~~~~~GDlVi~~d~ 137 (287)
T 1tcv_A 68 GNLIFGTLSGRKVVV-----MQ-G---RFHMYEGYSNDTVALPIRVMKLLGVKILMVSNAAGGLN-RSLKLGDFVILKDH 137 (287)
T ss_dssp CEEEEEEETTEEEEE-----EE-S---CCCGGGTCCHHHHHHHHHHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEE
T ss_pred ceEEEEEECCEEEEE-----Ee-c---CCcccCCCCHHHHHHHHHHHHHcCCCEEEEecceeecC-CCCCCCCEEEEHHH
Confidence 368999999999998 55 8 76 233333368888999999999999999999 89999999999999
Q ss_pred eec---cCCCCCCCcccCCCC-ccCCC---CChhHh-------h----cCcceEEEEe--ecCceecChHhHHHHHhCCC
Q 027878 87 AFH---DRRIPIPVFDLYGVG-QRQAF---STPNLL-------R----ELNLKVCKLS--TGDSLDMSSQDETSITANDA 146 (217)
Q Consensus 87 ~~~---d~~~~~p~f~~y~~g-~~p~~---~~~~l~-------~----~~~~~~G~i~--Sgd~~~~~~~~~~~l~~~~a 146 (217)
+++ +.....-.++....+ +.|.+ .|++|. + +.+++.|+++ +|++|.+.++ .++++..|+
T Consensus 138 i~~~g~t~~~~~~~~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~~~~~~~~~Gvy~~~~Gp~feT~aE-~~~~r~~Ga 216 (287)
T 1tcv_A 138 IYLPGLGLNNILVGPNQEAFGTRFPALSNAYDRDLRKLAVQVAEENGFGNLVHQGVYVMNGGPCYETPAE-CTMLLNMGC 216 (287)
T ss_dssp EEHHHHTTTCTTCSSCCTTTCCSSCCCTTSBCHHHHHHHHHHHHHTTCGGGEEEEEEEECCCSSCCCHHH-HHHHHHTTC
T ss_pred hcccccCCCCCcccCCccccCCCCCCCCcccCHHHHHHHHHHHhhhcCCCceeeEEEEEecCCccCCHHH-HHHHHHcCC
Confidence 988 632211012111112 22222 245442 2 3568899887 7999986654 677788899
Q ss_pred cEEcccchHHHHHHHhCCCCEEEEEeeecCCCC-C---Cc-cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027878 147 TIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG-D---KP-TAEEFMQNLVAVTAALEQSVSQVIDFING 211 (217)
Q Consensus 147 ~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~-~---~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~~~ 211 (217)
++|+||+++++++|+++++|+++|+.|||++.. + .+ +++++.+.++++++++.+.+..+|+.+..
T Consensus 217 d~VgMe~~~ea~vA~~~gi~~~~i~~Vtd~a~~~~~~~~~~~~eev~~~~~~~~~~~~~lv~~~i~~l~~ 286 (287)
T 1tcv_A 217 DVVGMSTIPEVVIARHCGIQVFAVSLVTNISVLDVESDLKPNHEEVLATGAQRAELMQSWFEKIIEKLPK 286 (287)
T ss_dssp SEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCTTCC-----------CHHHHHHHHHHHHHHHHHSCC
T ss_pred cEEcccHHHHHHHHHHCCCCEEEEEEeeccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999973 2 33 88999999999999999999999998753
No 35
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} SCOP: c.56.2.1 PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=99.93 E-value=1.7e-24 Score=183.17 Aligned_cols=183 Identities=15% Similarity=0.105 Sum_probs=142.3
Q ss_pred EEEEEEEcceeEEEeeeeeEeeCCC------CcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEccee
Q 027878 14 TCTQQEYEIHDLFFANLNLILSEVD------SVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVA 87 (217)
Q Consensus 14 ~~~~G~~~~~~v~~~~v~~~~~G~~------gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~ 87 (217)
+++.|+++|++|.+ +. |+. .+++++++ .++++.++++.||++|.|||++ +++++||+||+++.+
T Consensus 67 ~l~~G~l~G~~Vv~-----~~-Gr~H~yeg~~~~~v~~~---~~~l~~lGv~~iI~tgaaGgl~-~~~~~GDlVi~~d~i 136 (284)
T 3fuc_A 67 RLVFGILNGRACVM-----MQ-GRFHMYEGYPFWKVTFP---VRVFRLLGVETLVVTNAAGGLN-PNFEVGDIMLIRDHI 136 (284)
T ss_dssp EEEEEEETTEEEEE-----EE-SCCCGGGTCCHHHHTHH---HHHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEEE
T ss_pred cEEEEEECCEEEEE-----Ee-CCccccCCCChHHHHHH---HHHHHHcCCCEEEEecceecCC-CCCCCCCEEEehHHh
Confidence 69999999999998 43 621 02344444 4588999999999999999999 899999999999999
Q ss_pred ecc--CCCCCCCcccCC---CC-ccCCC---CChhHh---------hcCc--ceEEE--EeecCceecChHhHHHHHhCC
Q 027878 88 FHD--RRIPIPVFDLYG---VG-QRQAF---STPNLL---------RELN--LKVCK--LSTGDSLDMSSQDETSITAND 145 (217)
Q Consensus 88 ~~d--~~~~~p~f~~y~---~g-~~p~~---~~~~l~---------~~~~--~~~G~--i~Sgd~~~~~~~~~~~l~~~~ 145 (217)
+++ .+.+ |.+ .+. ++ ..|.+ .|++|. .+++ ++.|+ +.+||+|.+.+| .+++++.|
T Consensus 137 ~~t~~~~~~-~~~-g~~~~~~g~~~~~~~~~~d~~L~~~~~~~a~~~gi~~~~~~Gvy~~~~Gp~feT~AE-~~~~r~~G 213 (284)
T 3fuc_A 137 NLPGFSGEN-PLR-GPNEERFGVRFPAMSDAYDRDMRQKAHSTWKQMGEQRELQEGTYVMLGGPNFETVAE-CRLLRNLG 213 (284)
T ss_dssp EHHHHTTCC-TTC-SSCCTTTCCSSCCCTTCSCHHHHHHHHHHHHHHTCSSCCEEEEEEECCCSSCCCHHH-HHHHHHTT
T ss_pred cccCCcCCC-CCc-CccccccCCCcCCCCcCCCHHHHHHHHHHHHHcCCCcceEeeEEEEecCCEEcCHHH-HHHHHHcC
Confidence 886 2322 211 111 11 11211 245553 1466 88998 568999986555 46788899
Q ss_pred CcEEcccchHHHHHHHhCCCCEEEEEeeecCCCC----CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 146 ATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG----DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 146 a~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~----~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
+++|+||+++++++|+++++|+++|+.|||++.. +.+ +++++.+.++++++++.+.+..+++.+
T Consensus 214 ad~VgMe~~pea~lAr~~gi~~~~I~~VTd~a~~~~~~~~~~s~eev~~~~~~~~~~~~~l~~~~i~~l 282 (284)
T 3fuc_A 214 ADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQGKANHEEVLEAGKQAAQKLEQFVSLLMASI 282 (284)
T ss_dssp CSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHGGGS
T ss_pred CcEEecCHHHHHHHHHHcCCCEEEEEEEecccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999972 334 899999999999999999999998876
No 36
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=99.93 E-value=1e-24 Score=185.02 Aligned_cols=183 Identities=16% Similarity=0.137 Sum_probs=137.6
Q ss_pred EEEEEEEcceeEEEeeeeeEeeCCC------CcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEccee
Q 027878 14 TCTQQEYEIHDLFFANLNLILSEVD------SVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVA 87 (217)
Q Consensus 14 ~~~~G~~~~~~v~~~~v~~~~~G~~------gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~ 87 (217)
+++.|+++|++|.+ +. |+. .+++++++ .+++++++++.||++|.|||++ +++||+||+++.+
T Consensus 98 ~l~~G~l~G~~Vv~-----~~-Gr~H~yEG~~p~~V~~~---i~~l~~lGv~~II~t~aaGgL~---l~~GDlVi~~d~I 165 (303)
T 3la8_A 98 KLIYGELAGRKVLA-----LQ-GRFHYYEGNSMELVTFP---IRIMKALGCQGLIVTNAAGGIG---FGPGTLMAISDHI 165 (303)
T ss_dssp EEEEEEETTEEEEE-----EC--CCCGGGC-CHHHHHHH---HHHHHHHTCCEEEEEEEEEESS---SCTTEEEEEEEEE
T ss_pred ceEEEEECCEEEEE-----Ee-cCcccccCCCHHHHHHH---HHHHHHcCCCEEEEecceeccc---cCCCcEEEEhhHh
Confidence 59999999999998 44 521 13566665 5788999999999999999997 9999999999999
Q ss_pred eccCCCCCCCcccCCCC-ccCCC--C-ChhHh---------hcCcceEEEE--eecCceecChHhHHHHHhCCCcEEccc
Q 027878 88 FHDRRIPIPVFDLYGVG-QRQAF--S-TPNLL---------RELNLKVCKL--STGDSLDMSSQDETSITANDATIKDME 152 (217)
Q Consensus 88 ~~d~~~~~p~f~~y~~g-~~p~~--~-~~~l~---------~~~~~~~G~i--~Sgd~~~~~~~~~~~l~~~~a~~vdME 152 (217)
+++.+.....++.+.+| ..|.+ | |++|. .+++++.|+. .+||+|.+.+| .++++..|+++|+||
T Consensus 166 ~~t~~~pl~g~~~~~~G~~f~~m~~~yd~~Lr~~a~~aA~~~gi~~~~Gvy~~~~GP~FeT~AE-~r~~r~~GadaVgMs 244 (303)
T 3la8_A 166 NLTGANPLMGENLDDFGFRFPDMSNAYTADYREVAHQVADKIGIKLDEGVYIGVSGPSYETPAE-IRAFKTLGADAVGMS 244 (303)
T ss_dssp ECSSCCTTCC-CCGGGCCCSCCCTTSSCHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHH-HHHHHHTTCSEEESS
T ss_pred hhcCCCCCcCCcccccCCCcCCCCcccCHHHHHHHHHHHHHcCCceEEEEEEEeeCCccCCHHH-HHHHHHcCCCEEecc
Confidence 98764221112222222 11211 1 45553 2578899985 69999987665 567888999999999
Q ss_pred chHHHHHHHhCCCCEEEEEeeecCCCC-CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 027878 153 GAAVAYVADLFKVPALFVKAVTDLVDG-DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 209 (217)
Q Consensus 153 ~aava~~a~~~~ip~~~ir~ISD~~~~-~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~ 209 (217)
+++++++|+++++|+++|+.|||++.. +.+ +++++.+.++++++++.+.+..+|+.+
T Consensus 245 t~pEa~vAre~gi~~~~Is~ITD~a~g~~~~vs~eevl~~a~~~~~~~~~ll~~~i~~~ 303 (303)
T 3la8_A 245 TVPEVIVAVHSGLKVLGISAITNYAAGFQSELNHEEVVAVTQQIKEDFKGLVKAILVEL 303 (303)
T ss_dssp SHHHHHHHHHTTCEEEEEEEEEEECTTC---------CCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEEEEeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999976 334 899999999999999999999998764
No 37
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus} SCOP: c.56.2.0
Probab=99.93 E-value=2.1e-24 Score=182.74 Aligned_cols=184 Identities=15% Similarity=0.122 Sum_probs=137.3
Q ss_pred EEEEEEEcceeEEEeeeeeEeeCCCCcC---------HHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEc
Q 027878 14 TCTQQEYEIHDLFFANLNLILSEVDSVG---------TISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLIS 84 (217)
Q Consensus 14 ~~~~G~~~~~~v~~~~v~~~~~G~~gvG---------~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~ 84 (217)
.++.|+++|++|.+ +. | +| +++++ .+++..++++.||++|.|||++ +++++||+||++
T Consensus 64 ~l~~G~l~G~~Vv~-----~~-G---rgH~yeg~~~~~v~~~---i~~l~~lGv~~iI~tgaaGgl~-~~~~~GDlVi~~ 130 (285)
T 3khs_A 64 SLIFGSVNGVSCVC-----MK-G---RFHLYEGHTAARATFP---MRVFKALGVKIVVLTNAAGGLN-PSYRPGDFMVVR 130 (285)
T ss_dssp EEEEEEETTEEEEE-----EE-S---CCCGGGTCCHHHHTHH---HHHHHHTTCCEEEEEEEEEECS-TTCCTTCEEEEE
T ss_pred ceEEEEECCEEEEE-----Ee-C---CCcccCCCChHHhHHH---HHHHHHcCCCEEEEecceecCC-CCCCCCCEEeeh
Confidence 79999999999998 54 8 76 66554 5688999999999999999999 899999999999
Q ss_pred ceeecc--CCCCCC--CcccCCCC-ccCCC---CChhHh---------hcCc--ceEEEE--eecCceecChHhHHHHHh
Q 027878 85 DVAFHD--RRIPIP--VFDLYGVG-QRQAF---STPNLL---------RELN--LKVCKL--STGDSLDMSSQDETSITA 143 (217)
Q Consensus 85 ~~~~~d--~~~~~p--~f~~y~~g-~~p~~---~~~~l~---------~~~~--~~~G~i--~Sgd~~~~~~~~~~~l~~ 143 (217)
+.++++ .+.+ | +++...+| ..|.+ .|++|. .+++ ++.|+. .+||+|.+.+| .+++++
T Consensus 131 d~id~t~~~~~~-pl~g~~~~~~g~~~~~~~~~yd~~L~~~~~~~a~~~gi~~~~~~Gvy~~~~Gp~feT~AE-~~~~r~ 208 (285)
T 3khs_A 131 DHINLPGLAGAN-PLTGPNDDTEGERFPSMTSVYDKTLRKYAISAARELGMSYATHEGVYCCVNGPSFETPAE-CKILRL 208 (285)
T ss_dssp EEEEHHHHTTCC-TTCSCCCTTTSCSSCCCTTCBCHHHHHHHHHHHHHHTCGGGEEEEEEEECCCSSCCCHHH-HHHHHH
T ss_pred heEecccccCCC-CCcCccccccCCCCCCcCccCCHHHHHHHHHHHHHcCCCcceeeEEEEEecCCEEeCHHH-HHHHHH
Confidence 999753 2222 2 11111112 11211 145553 1455 788974 68999987655 467888
Q ss_pred CCCcEEcccchHHHHHHHhCCCCEEEEEeeecCCCC----CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 027878 144 NDATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG----DKP-TAEEFMQNLVAVTAALEQSVSQVIDFINGK 212 (217)
Q Consensus 144 ~~a~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~----~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~~~~ 212 (217)
.|+++|+||+++++++|+++++|+++|+.|||++.. +.+ +++++.+.++++++++.+.+..+|+.+..+
T Consensus 209 ~Gad~VgMe~~pea~lAr~~gi~~~~i~~VTd~a~g~~~~~~~~s~~ev~~~~~~~~~~~~~lv~~~i~~l~~~ 282 (285)
T 3khs_A 209 MGSDAVGMSTAPETIVAKHGGMRCLAVSLISNVIASNCETPAEPTHEEVLRAGEEASARMTALVKLVIEKIRGE 282 (285)
T ss_dssp TTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCTTCC------------CHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCcEEeccHHHHHHHHHHCCCCEEEEEEEeccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999974 233 899999999999999999999999998654
No 38
>3phb_E Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.30A {Homo sapiens}
Probab=99.92 E-value=6.3e-24 Score=182.02 Aligned_cols=185 Identities=16% Similarity=0.099 Sum_probs=143.0
Q ss_pred EEEEEEEcceeEEEeeeeeEeeCCC------CcCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEccee
Q 027878 14 TCTQQEYEIHDLFFANLNLILSEVD------SVGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVA 87 (217)
Q Consensus 14 ~~~~G~~~~~~v~~~~v~~~~~G~~------gvG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~ 87 (217)
+++.|+++|++|.+ +. |+. .+++++++ .+++..++++.||++|.|||++ +++++||+||+++.+
T Consensus 102 ~l~~G~l~G~~Vv~-----m~-Gr~H~yeG~~~~~V~~~---~~ll~~lGv~~II~tgaaGgL~-~~l~~GDlVi~~d~I 171 (324)
T 3phb_E 102 RLVFGFLNGRACVM-----MQ-GRFHMYEGYPLWKVTFP---VRVFHLLGVDTLVVTNAAGGLN-PKFEVGDIMLIRDHI 171 (324)
T ss_dssp EEEEEEETTEEEEE-----EE-SCCCGGGTCCHHHHTHH---HHHHHHHTCCEEEEEEEEEECS-TTCCTTCEEEEEEEE
T ss_pred ceEEEEECCEEEEE-----Ee-CCccccCCCChHHHHHH---HHHHHHcCCCEEEEecceeecC-CCCCCCCEEEEhhHc
Confidence 69999999999998 43 621 13344444 3588999999999999999999 899999999999999
Q ss_pred eccC--CCCCCCcccCC---CC-ccCCC---CChhHhh---------cCc--ceEEE--EeecCceecChHhHHHHHhCC
Q 027878 88 FHDR--RIPIPVFDLYG---VG-QRQAF---STPNLLR---------ELN--LKVCK--LSTGDSLDMSSQDETSITAND 145 (217)
Q Consensus 88 ~~d~--~~~~p~f~~y~---~g-~~p~~---~~~~l~~---------~~~--~~~G~--i~Sgd~~~~~~~~~~~l~~~~ 145 (217)
+++. +.+ |.+ .+. ++ ..|.+ .|++|.+ +++ ++.|+ +.+||+|.+.+| .++++..|
T Consensus 172 d~t~~~~~~-pl~-G~~~~~~g~~~~~m~~~yd~~Lr~~a~~aA~~~gi~~~~~~Gvy~~~~GP~FeT~AE-~r~~r~~G 248 (324)
T 3phb_E 172 NLPGFSGQN-PLR-GPNDERFGDRFPAMSDAYDRTMRQRALSTWKQMGEQRELQEGTYVMVAGPSFETVAE-CRVLQKLG 248 (324)
T ss_dssp EHHHHHTCC-TTC-SSCCTTTCCSSCBCTTCSCHHHHHHHHHHHTTSCCSSCCEEEEEEECCCSSCCCHHH-HHHHHHHT
T ss_pred cCcCCcCCC-CCc-CCCccccCCCcCccCCCCCHHHHHHHHHHHHHcCCCceEeceEEEEecCCEEeCHHH-HHHHHHcC
Confidence 8752 222 211 111 11 11111 2455531 455 78897 478999987555 46778889
Q ss_pred CcEEcccchHHHHHHHhCCCCEEEEEeeecCCCC----CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 027878 146 ATIKDMEGAAVAYVADLFKVPALFVKAVTDLVDG----DKP-TAEEFMQNLVAVTAALEQSVSQVIDFING 211 (217)
Q Consensus 146 a~~vdME~aava~~a~~~~ip~~~ir~ISD~~~~----~~~-~~~~~~~~~~~a~~~~~~~l~~~l~~~~~ 211 (217)
+++|+||+++++++|+++++|+++|+.|||++.. +.+ +++++.+.++++++++.+.+..+|+.+..
T Consensus 249 adaVgMet~pEa~vAr~~gi~~~~Is~VTD~a~~~~~~~~~vs~eevl~~a~~~~~~~~~Lv~~~i~~l~~ 319 (324)
T 3phb_E 249 ADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMASIPL 319 (324)
T ss_dssp CSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred CcEEecChHHHHHHHHHCCCCEEEEEEEecccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999972 334 89999999999999999999999998853
No 39
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=99.92 E-value=1.6e-23 Score=175.89 Aligned_cols=177 Identities=16% Similarity=0.176 Sum_probs=139.4
Q ss_pred EEEEEEEcc-----eeEEEeeeeeEeeCCCC------cCHHHHHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEE
Q 027878 14 TCTQQEYEI-----HDLFFANLNLILSEVDS------VGTISASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFL 82 (217)
Q Consensus 14 ~~~~G~~~~-----~~v~~~~v~~~~~G~~g------vG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi 82 (217)
+++.|+++| ++|.+ + .|+.- ++++++ ..+++..++++.||++|.|||++ +++++||+||
T Consensus 65 ~l~~G~l~G~~~~~~~Vv~-----~-~Gr~h~yeg~~p~~V~a---~i~~l~~lGv~~iI~tgaaG~l~-~~l~~GDlVi 134 (266)
T 1qe5_A 65 VTRSIRVERADGSVRHALV-----L-GSRTHLYEGKGVRAVVH---GVRTAAATGAETLILTNGCGGLN-QEWGAGTPVL 134 (266)
T ss_dssp EEEEEEEECTTSCEEEEEE-----C-CSCCCGGGSSCHHHHSH---HHHHHHHTTCCEEEEEEEEEECC-TTSCTTCEEE
T ss_pred EEEEEEECCcCCCceEEEE-----E-ECCccccCCCCHHHHHH---HHHHHHHcCCCEEEEecceecCC-CCCCCCCEEE
Confidence 589999999 99888 4 46211 345564 34788999999999999999999 8999999999
Q ss_pred EcceeeccCCCCCCCcccCCCCccCCC---CChhHhh-----cCcceEEEE--eecCceecChHhHHHHHhCCCcEEccc
Q 027878 83 ISDVAFHDRRIPIPVFDLYGVGQRQAF---STPNLLR-----ELNLKVCKL--STGDSLDMSSQDETSITANDATIKDME 152 (217)
Q Consensus 83 ~~~~~~~d~~~~~p~f~~y~~g~~p~~---~~~~l~~-----~~~~~~G~i--~Sgd~~~~~~~~~~~l~~~~a~~vdME 152 (217)
++++++++.+ + | |.. ...|.+ .|++|.+ ...++.|+. .+|++|.+.+ ..++++..|+++|+||
T Consensus 135 ~~d~i~~t~~-~-~-~~g---~~~~~~~~~~d~~L~~~~~~~a~~~~~Gvy~~~~Gp~feT~a-E~~~~r~~Gad~VgMe 207 (266)
T 1qe5_A 135 LSDHINLTAR-S-P-LEG---PTFVDLTDVYSPRLRELAHRVDPTLPEGVYAQFPGPHYETPA-EVRMAGILGADLVGMS 207 (266)
T ss_dssp EEEEEECSSC-C-S-CCS---SCCCCCTTSBCHHHHHHHHHHCTTCCEEEEEECCCSSCCCHH-HHHHHHHHTCSEEESS
T ss_pred EhHHhhhCCC-C-C-CCC---CCCCCCCcccCHHHHHHHHHHHHHhCCCeEEEeeCCEEeCHH-HHHHHHHcCCeEEecC
Confidence 9999999875 2 3 311 111222 2555542 125678875 6899998654 4677787899999999
Q ss_pred chHHHHHHHhCCCCEEEEEeeecCCCC--CCc-cHHHHHHHHHHHHHHHHHHHHHHHH
Q 027878 153 GAAVAYVADLFKVPALFVKAVTDLVDG--DKP-TAEEFMQNLVAVTAALEQSVSQVID 207 (217)
Q Consensus 153 ~aava~~a~~~~ip~~~ir~ISD~~~~--~~~-~~~~~~~~~~~a~~~~~~~l~~~l~ 207 (217)
+++++++|+++|+|+++|+.|||++.. +.+ +++++.+.++++++++.+.+..+|+
T Consensus 208 ~~pea~lAr~~gi~~~~i~~Vtd~a~g~~~~~~s~eev~~~~~~~~~~~~~ll~~~i~ 265 (266)
T 1qe5_A 208 TTLEAIAARHCGLEVLGVSLVTNLAAGISPTPLSHAEVIEAGQAAGPRISALLADIAK 265 (266)
T ss_dssp SHHHHHHHHHTTCEEEEEEEEEEECTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHCCCCEEEEEEEecCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999975 233 8999999999999999998888774
No 40
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus}
Probab=62.42 E-value=22 Score=27.51 Aligned_cols=28 Identities=14% Similarity=0.131 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhcCCCEEEEEeeecccC
Q 027878 44 SASLVTYASIQALKPDLIINAGTAGGFK 71 (217)
Q Consensus 44 ~Aa~~~~~li~~~~~~~ii~~G~aG~l~ 71 (217)
.+.-.+.+++++++||.+|.+|.+|+..
T Consensus 44 ~~~~~l~~~~~~~~pd~vi~~G~a~~r~ 71 (192)
T 2ebj_A 44 EALGEALEDLHREGPKAVLHLGLAEDRP 71 (192)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEEECTTCS
T ss_pred cHHHHHHHHHHHhCCCEEEEeccCCCCc
Confidence 4445678888889999999999999887
No 41
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=62.01 E-value=24 Score=27.85 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccE
Q 027878 45 ASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDV 80 (217)
Q Consensus 45 Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDv 80 (217)
+.-.+.+++++++||.+|.+|.+|+.+ .+.+=-+
T Consensus 50 ~~~~l~~~i~~~~Pd~Vi~vG~a~gr~--~i~lEr~ 83 (215)
T 3giu_A 50 VDNIINKTLASNHYDVVLAIGQAGGRN--AITPERV 83 (215)
T ss_dssp HHHHHHHHHHHSCCSEEEEEEECTTCC--SBEEBCE
T ss_pred HHHHHHHHHHHhCCCEEEEeccCCCCc--eEEEEEE
Confidence 445567888899999999999999976 3544433
No 42
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=54.67 E-value=31 Score=27.12 Aligned_cols=27 Identities=33% Similarity=0.628 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhcCCCEEEEEeeecccC
Q 027878 45 ASLVTYASIQALKPDLIINAGTAGGFK 71 (217)
Q Consensus 45 Aa~~~~~li~~~~~~~ii~~G~aG~l~ 71 (217)
+.-.+..++++++|+.+|.+|.+|+..
T Consensus 50 ~~~~l~~~i~~~~Pd~vi~~G~a~gr~ 76 (216)
T 4gxh_A 50 SLEHLYAAVDKYQPELVISVGQAGGRT 76 (216)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHhhCCCEEEEeccCCCCC
Confidence 344567888889999999999999987
No 43
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=52.39 E-value=15 Score=29.28 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccE
Q 027878 45 ASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDV 80 (217)
Q Consensus 45 Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDv 80 (217)
+.-.+.+++++++||.+|.+|.+|+.+ .+.+=-+
T Consensus 50 ~~~~l~~~i~~~~Pd~VihvG~aggr~--~i~lEr~ 83 (223)
T 3ro0_A 50 SLAVLREAMKKHQPDIIICVGQAGGRM--QITPERV 83 (223)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCC--SBEEBSE
T ss_pred HHHHHHHHHHHhCCCEEEEeccCCCCc--eEEEEEE
Confidence 445567778889999999999999986 4554443
No 44
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=51.90 E-value=41 Score=26.51 Aligned_cols=27 Identities=26% Similarity=0.524 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhcCCCEEEEEeeecccC
Q 027878 45 ASLVTYASIQALKPDLIINAGTAGGFK 71 (217)
Q Consensus 45 Aa~~~~~li~~~~~~~ii~~G~aG~l~ 71 (217)
+.-.+.+++++++||.+|.+|.+|+..
T Consensus 49 ~~~~l~~~i~~~~Pd~Vi~vG~aggr~ 75 (220)
T 1a2z_A 49 ATIELKRYLEEIKPEIVINLGLAPTYS 75 (220)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCc
Confidence 445567788889999999999999987
No 45
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=51.19 E-value=35 Score=26.61 Aligned_cols=30 Identities=30% Similarity=0.484 Sum_probs=24.2
Q ss_pred cCHHHHHHHHHHHHHhcCCCEEEEEeeecccC
Q 027878 40 VGTISASLVTYASIQALKPDLIINAGTAGGFK 71 (217)
Q Consensus 40 vG~~~Aa~~~~~li~~~~~~~ii~~G~aG~l~ 71 (217)
.+++ .-.+.+++++++||.+|.+|.+|+..
T Consensus 45 ~~~~--~~~l~~~~~~~~pd~vi~vG~a~gr~ 74 (208)
T 1x10_A 45 FGKA--KEVLEKTLEEIKPDIAIHVGLAPGRS 74 (208)
T ss_dssp TTHH--HHHHHHHHHHHCCSEEEEEEECTTCC
T ss_pred HHHH--HHHHHHHHHHhCCCEEEEecCCCCCc
Confidence 4444 44667788889999999999999987
No 46
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=51.15 E-value=38 Score=26.91 Aligned_cols=27 Identities=33% Similarity=0.628 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhcCCCEEEEEeeecccC
Q 027878 45 ASLVTYASIQALKPDLIINAGTAGGFK 71 (217)
Q Consensus 45 Aa~~~~~li~~~~~~~ii~~G~aG~l~ 71 (217)
+.-.+.+++++++||.||.+|.+|+.+
T Consensus 71 ~~~~l~~~i~~~~Pd~VihvG~aggr~ 97 (228)
T 4hps_A 71 SLEHLYAAVDKYQPELVISVGQAGGRT 97 (228)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHhhCCCEEEEeccCCCCc
Confidence 344556778889999999999999987
No 47
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=50.13 E-value=17 Score=28.65 Aligned_cols=27 Identities=37% Similarity=0.503 Sum_probs=22.4
Q ss_pred HHHHHHHHHHhcCCCEEEEEeeecccC
Q 027878 45 ASLVTYASIQALKPDLIINAGTAGGFK 71 (217)
Q Consensus 45 Aa~~~~~li~~~~~~~ii~~G~aG~l~ 71 (217)
+.-.+.+++++++||.+|.+|.+|+.+
T Consensus 49 ~~~~l~~~~~~~~Pd~VihvG~aggr~ 75 (215)
T 3lac_A 49 SISVLKEYIEELAPEFIICIGQAGGRP 75 (215)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHhhCCCeEEEeccCCCCc
Confidence 334567788889999999999999876
No 48
>1iu8_A Pyrrolidone-carboxylate peptidase; hydrolase, thiol protease, complete proteome; 1.60A {Pyrococcus horikoshii} SCOP: c.56.4.1
Probab=48.39 E-value=19 Score=28.16 Aligned_cols=27 Identities=30% Similarity=0.416 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhcCCCEEEEEeeecccC
Q 027878 45 ASLVTYASIQALKPDLIINAGTAGGFK 71 (217)
Q Consensus 45 Aa~~~~~li~~~~~~~ii~~G~aG~l~ 71 (217)
+.-.+.+++++++||.+|.+|.+|+-.
T Consensus 45 ~~~~l~~~~~~~~Pd~vi~vG~a~gr~ 71 (206)
T 1iu8_A 45 AREKLLKVLDDVRPDITINLGLAPGRT 71 (206)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTCS
T ss_pred HHHHHHHHHHHhCCCEEEEcccCCCCc
Confidence 445567888889999999999999987
No 49
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=45.31 E-value=69 Score=22.09 Aligned_cols=51 Identities=8% Similarity=-0.125 Sum_probs=30.1
Q ss_pred EeeCCCCcCHHH-HHHHHHHHHHhcCCCEEEEEeeecccCCCCCCcccEEEEccee
Q 027878 33 ILSEVDSVGTIS-ASLVTYASIQALKPDLIINAGTAGGFKAKGASIGDVFLISDVA 87 (217)
Q Consensus 33 ~~~G~~gvG~~~-Aa~~~~~li~~~~~~~ii~~G~aG~l~~~~~~~GDvvi~~~~~ 87 (217)
|.+| ||... .+..+...+.+.+.+.-+..-....+. ..+.--|+|+.+.-+
T Consensus 28 C~sG---~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~-~~~~~~DlIist~~l 79 (113)
T 1tvm_A 28 CGGA---VATSTMAAEEIKELCQSHNIPVELIQCRVNEIE-TYMDGVHLICTTARV 79 (113)
T ss_dssp SCSC---SSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTT-TSTTSCSEEEESSCC
T ss_pred CCCC---HHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHh-hccCCCCEEEECCcc
Confidence 5555 88766 466667777777787433332223344 334446888887644
No 50
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=32.61 E-value=67 Score=26.47 Aligned_cols=32 Identities=16% Similarity=0.212 Sum_probs=25.3
Q ss_pred EeeCCCCcCHHHHHHHHHHHHHhcCCCEEEEEe
Q 027878 33 ILSEVDSVGTISASLVTYASIQALKPDLIINAG 65 (217)
Q Consensus 33 ~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii~~G 65 (217)
+.+|=+||||...++.+...+++.+-+ |+.++
T Consensus 52 AIaGKGGVGKTTtavNLA~aLA~~Gkk-VllID 83 (314)
T 3fwy_A 52 AVYGKGGIGKSTTSSNLSAAFSILGKR-VLQIG 83 (314)
T ss_dssp EEECSTTSSHHHHHHHHHHHHHHTTCC-EEEEE
T ss_pred EEECCCccCHHHHHHHHHHHHHHCCCe-EEEEe
Confidence 345888999999999999999987765 44444
No 51
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=25.73 E-value=75 Score=26.60 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=26.0
Q ss_pred EeeCCCCcCHHHHHHHHHHHHH--hcCCCEE-EEEeeecc
Q 027878 33 ILSEVDSVGTISASLVTYASIQ--ALKPDLI-INAGTAGG 69 (217)
Q Consensus 33 ~~~G~~gvG~~~Aa~~~~~li~--~~~~~~i-i~~G~aG~ 69 (217)
+.+|-+|+||...++++...++ +.+-+.+ |-+-.++.
T Consensus 22 v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~~~ 61 (354)
T 2woj_A 22 FVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPAHN 61 (354)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSCC
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCCC
Confidence 5677778999999999999988 6655533 33333333
No 52
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=25.62 E-value=1.1e+02 Score=25.49 Aligned_cols=29 Identities=14% Similarity=0.157 Sum_probs=23.3
Q ss_pred EeeCCCCcCHHHHHHHHHHHHHhcCCCEE
Q 027878 33 ILSEVDSVGTISASLVTYASIQALKPDLI 61 (217)
Q Consensus 33 ~~~G~~gvG~~~Aa~~~~~li~~~~~~~i 61 (217)
+.+|-+|+||...|+++...+++.+-+.+
T Consensus 30 v~sgKGGvGKTTvA~~LA~~lA~~G~rVL 58 (349)
T 3ug7_A 30 MFGGKGGVGKTTMSAATGVYLAEKGLKVV 58 (349)
T ss_dssp EEECSSSTTHHHHHHHHHHHHHHSSCCEE
T ss_pred EEeCCCCccHHHHHHHHHHHHHHCCCeEE
Confidence 56788889999999999988887655533
No 53
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=25.55 E-value=29 Score=26.73 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=22.6
Q ss_pred CCcEEcccchHHHHHHHhCCCCEEEEEe
Q 027878 145 DATIKDMEGAAVAYVADLFKVPALFVKA 172 (217)
Q Consensus 145 ~a~~vdME~aava~~a~~~~ip~~~ir~ 172 (217)
|..+=-.=++.+|.+|+.+++||+++--
T Consensus 66 G~v~nkiGT~~~Al~Ak~~~vPf~V~a~ 93 (191)
T 1w2w_B 66 GDTANKIGTLQLAVICKQFGIKFFVVAP 93 (191)
T ss_dssp SCEEEETTHHHHHHHHHHHTCEEEEECC
T ss_pred CCEEecccHHHHHHHHHHcCCCEEEecc
Confidence 5555566679999999999999999744
No 54
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=25.08 E-value=1.2e+02 Score=22.18 Aligned_cols=29 Identities=10% Similarity=0.140 Sum_probs=22.0
Q ss_pred EeeCCCCcCHHHHHHHHHHHHHhcCCCEE
Q 027878 33 ILSEVDSVGTISASLVTYASIQALKPDLI 61 (217)
Q Consensus 33 ~~~G~~gvG~~~Aa~~~~~li~~~~~~~i 61 (217)
+.++-+|+||...+..+...+.+.+-+.+
T Consensus 6 v~s~kgG~GKTt~a~~la~~la~~g~~vl 34 (206)
T 4dzz_A 6 FLNPKGGSGKTTAVINIATALSRSGYNIA 34 (206)
T ss_dssp ECCSSTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred EEeCCCCccHHHHHHHHHHHHHHCCCeEE
Confidence 45555679999999999998887655433
No 55
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=24.52 E-value=1e+02 Score=25.21 Aligned_cols=29 Identities=14% Similarity=0.108 Sum_probs=22.8
Q ss_pred EeeCCCCcCHHHHHHHHHHHHHhcCCCEE
Q 027878 33 ILSEVDSVGTISASLVTYASIQALKPDLI 61 (217)
Q Consensus 33 ~~~G~~gvG~~~Aa~~~~~li~~~~~~~i 61 (217)
+.+|-+|+||...|+++...+++.+-+.+
T Consensus 18 v~sgKGGvGKTTvA~~LA~~lA~~G~rVL 46 (324)
T 3zq6_A 18 FIGGKGGVGKTTISAATALWMARSGKKTL 46 (324)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred EEeCCCCchHHHHHHHHHHHHHHCCCcEE
Confidence 46677789999999999988887665533
No 56
>1kv4_A Moricin; helix, antibiotic, insect immunity; NMR {Bombyx mori} SCOP: j.4.1.3 PDB: 1x22_A
Probab=23.69 E-value=42 Score=19.09 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=18.1
Q ss_pred cCHHHHHHHHHHHHHhcCCC
Q 027878 40 VGTISASLVTYASIQALKPD 59 (217)
Q Consensus 40 vG~~~Aa~~~~~li~~~~~~ 59 (217)
.+.+++|.+++...++++|+
T Consensus 19 L~ai~~a~TahdVy~~~kpk 38 (42)
T 1kv4_A 19 LRAINIASTANDVFNFLKPK 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHTCCS
T ss_pred hhhhccchhHHHHHHHhccc
Confidence 78899999999999999886
No 57
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=23.17 E-value=1.2e+02 Score=24.99 Aligned_cols=30 Identities=10% Similarity=0.263 Sum_probs=24.3
Q ss_pred EeeCCCCcCHHHHHHHHHHHHHhcCCCEEE
Q 027878 33 ILSEVDSVGTISASLVTYASIQALKPDLII 62 (217)
Q Consensus 33 ~~~G~~gvG~~~Aa~~~~~li~~~~~~~ii 62 (217)
+.+|-+|+||...++++...+++.+-+.++
T Consensus 23 v~sgkGGvGKTTva~~LA~~lA~~G~rVll 52 (329)
T 2woo_A 23 FVGGKGGVGKTTTSCSLAIQMSKVRSSVLL 52 (329)
T ss_dssp EEECSSSSSHHHHHHHHHHHHHTSSSCEEE
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHCCCeEEE
Confidence 467778899999999999998877766554
No 58
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=22.71 E-value=1.2e+02 Score=25.22 Aligned_cols=27 Identities=15% Similarity=0.134 Sum_probs=22.1
Q ss_pred EeeCCCCcCHHHHHHHHHHHHHhcCCC
Q 027878 33 ILSEVDSVGTISASLVTYASIQALKPD 59 (217)
Q Consensus 33 ~~~G~~gvG~~~Aa~~~~~li~~~~~~ 59 (217)
+.+|-+|+||...|+.+...+++.+-+
T Consensus 148 v~s~KGGvGKTT~a~nLA~~La~~g~r 174 (373)
T 3fkq_A 148 FTSPCGGVGTSTVAAACAIAHANMGKK 174 (373)
T ss_dssp EECSSTTSSHHHHHHHHHHHHHHHTCC
T ss_pred EECCCCCChHHHHHHHHHHHHHhCCCC
Confidence 567778899999999999888876544
No 59
>2jr8_A Antimicrobial peptide moricin; antimicrobial protein; NMR {Synthetic} SCOP: j.4.1.3
Probab=21.66 E-value=45 Score=18.97 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=17.9
Q ss_pred cCHHHHHHHHHHHHHhcCCC
Q 027878 40 VGTISASLVTYASIQALKPD 59 (217)
Q Consensus 40 vG~~~Aa~~~~~li~~~~~~ 59 (217)
.+.+++|.++....+.++|+
T Consensus 19 l~ai~~a~TahdVy~~~kpk 38 (42)
T 2jr8_A 19 LRAINIAGTTHDVVSFFRPK 38 (42)
T ss_dssp HHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhccchhHHHHHHHhccc
Confidence 78899999999999998886
No 60
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=20.16 E-value=1.3e+02 Score=24.40 Aligned_cols=30 Identities=7% Similarity=0.019 Sum_probs=22.4
Q ss_pred CCcEEcccchHHHHHHHhCCCCEEEEEeee
Q 027878 145 DATIKDMEGAAVAYVADLFKVPALFVKAVT 174 (217)
Q Consensus 145 ~a~~vdME~aava~~a~~~~ip~~~ir~IS 174 (217)
|..+--..++.++.+|+.+++||+++--.+
T Consensus 192 G~v~nkiGt~~iA~~A~~~~vp~~V~a~~~ 221 (276)
T 1vb5_A 192 GYVVNKAGTYLLALACHENAIPFYVAAETY 221 (276)
T ss_dssp SCEEEETTHHHHHHHHHHTTCCEEEECCGG
T ss_pred CCEeechhHHHHHHHHHHcCCCEEEecccc
Confidence 333434667999999999999999864433
No 61
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=20.14 E-value=1.4e+02 Score=24.89 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=23.8
Q ss_pred CCcEEcccchHHHHHHHhCCCCEEEEEeeec
Q 027878 145 DATIKDMEGAAVAYVADLFKVPALFVKAVTD 175 (217)
Q Consensus 145 ~a~~vdME~aava~~a~~~~ip~~~ir~ISD 175 (217)
|..+--.-++.++.+|+.+++||+++--.+.
T Consensus 204 G~v~nkiGT~~iAl~Ak~~~vP~~V~a~~~K 234 (315)
T 3ecs_A 204 GGIINKIGTNQMAVCAKAQNKPFYVVAESFK 234 (315)
T ss_dssp SCEEEETTHHHHHHHHHHTTCCEEEECCGGG
T ss_pred CCeeehhhhHHHHHHHHHhCCCEEEEecccc
Confidence 4555556678999999999999998855443
No 62
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=20.08 E-value=1.8e+02 Score=22.17 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=22.3
Q ss_pred EeeCCCCcCHHHHHHHHHHHHHhcCCCEE
Q 027878 33 ILSEVDSVGTISASLVTYASIQALKPDLI 61 (217)
Q Consensus 33 ~~~G~~gvG~~~Aa~~~~~li~~~~~~~i 61 (217)
+.++-+|+||...++.+...+.+.+-+.+
T Consensus 7 v~s~kgGvGKTt~a~~LA~~la~~g~~Vl 35 (260)
T 3q9l_A 7 VTSGKGGVGKTTSSAAIATGLAQKGKKTV 35 (260)
T ss_dssp EECSSTTSSHHHHHHHHHHHHHHTTCCEE
T ss_pred EECCCCCCcHHHHHHHHHHHHHhCCCcEE
Confidence 45556679999999999999887665533
Done!