Query 027884
Match_columns 217
No_of_seqs 272 out of 1129
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 03:55:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027884.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027884hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1we9_A PHD finger family prote 99.7 7E-19 2.4E-23 124.0 2.8 60 158-217 3-62 (64)
2 1wep_A PHF8; structural genomi 99.6 2.4E-16 8.2E-21 115.7 4.7 57 157-214 8-64 (79)
3 1wew_A DNA-binding family prot 99.6 2E-16 6.7E-21 116.2 2.9 58 157-216 12-75 (78)
4 3kqi_A GRC5, PHD finger protei 99.6 7.5E-17 2.6E-21 117.5 -0.3 57 157-214 6-62 (75)
5 1wee_A PHD finger family prote 99.6 2.5E-16 8.6E-21 113.8 1.9 58 155-214 10-67 (72)
6 2vpb_A Hpygo1, pygopus homolog 99.6 7.6E-17 2.6E-21 115.5 -1.9 54 159-212 6-65 (65)
7 1wem_A Death associated transc 99.5 3.5E-16 1.2E-20 113.8 -0.5 55 159-215 14-72 (76)
8 2kgg_A Histone demethylase jar 99.5 1.1E-15 3.6E-20 104.5 1.8 49 162-211 3-52 (52)
9 3o70_A PHD finger protein 13; 99.5 1.9E-15 6.6E-20 108.9 2.6 53 157-213 15-67 (68)
10 2rsd_A E3 SUMO-protein ligase 99.5 2.3E-15 8E-20 107.8 1.7 55 159-215 8-67 (68)
11 1weu_A Inhibitor of growth fam 99.5 3.6E-14 1.2E-18 108.0 7.2 55 156-216 31-88 (91)
12 3o7a_A PHD finger protein 13 v 99.5 8E-15 2.7E-19 100.0 2.4 47 162-212 5-51 (52)
13 2xb1_A Pygopus homolog 2, B-ce 99.5 2.7E-15 9.3E-20 116.1 -0.5 54 161-214 3-62 (105)
14 2k16_A Transcription initiatio 99.5 1.1E-14 3.9E-19 105.3 2.3 54 159-214 16-69 (75)
15 1wen_A Inhibitor of growth fam 99.4 9.5E-14 3.3E-18 100.8 5.9 54 157-216 12-68 (71)
16 2lv9_A Histone-lysine N-methyl 99.4 3.2E-13 1.1E-17 103.1 5.8 51 160-214 27-77 (98)
17 2g6q_A Inhibitor of growth pro 99.4 6.6E-14 2.3E-18 99.2 1.1 52 157-214 7-61 (62)
18 2ri7_A Nucleosome-remodeling f 99.3 4.3E-14 1.5E-18 115.8 -1.4 55 158-213 5-59 (174)
19 3kv5_D JMJC domain-containing 99.3 7.4E-14 2.5E-18 132.5 -0.8 55 158-213 34-88 (488)
20 3c6w_A P28ING5, inhibitor of g 99.3 1.5E-13 5.1E-18 96.5 0.9 50 159-214 7-59 (59)
21 2vnf_A ING 4, P29ING4, inhibit 99.3 2.7E-13 9.3E-18 95.3 0.9 51 158-214 7-60 (60)
22 3kv4_A PHD finger protein 8; e 99.3 1.6E-13 5.4E-18 129.2 -1.7 55 159-214 3-57 (447)
23 2jmi_A Protein YNG1, ING1 homo 99.2 2E-12 6.7E-17 98.2 2.1 50 157-212 22-75 (90)
24 1x4i_A Inhibitor of growth pro 99.2 1.1E-12 3.6E-17 95.0 -1.3 48 159-212 4-54 (70)
25 3pur_A Lysine-specific demethy 99.0 5.5E-11 1.9E-15 113.9 2.5 43 171-213 52-94 (528)
26 3lqh_A Histone-lysine N-methyl 98.9 1.2E-10 4.2E-15 98.0 1.0 40 176-215 20-65 (183)
27 1f62_A Transcription factor WS 98.8 2E-09 6.8E-14 72.3 3.4 49 163-213 2-50 (51)
28 2l5u_A Chromodomain-helicase-D 98.7 7.6E-09 2.6E-13 72.5 4.4 52 157-213 7-58 (61)
29 2ku3_A Bromodomain-containing 98.7 1.5E-09 5.2E-14 78.7 0.5 55 160-217 15-70 (71)
30 1mm2_A MI2-beta; PHD, zinc fin 98.7 1.4E-08 4.6E-13 71.2 3.8 54 158-216 6-59 (61)
31 2e6r_A Jumonji/ARID domain-con 98.6 7E-09 2.4E-13 78.3 1.4 52 160-213 15-66 (92)
32 1xwh_A Autoimmune regulator; P 98.6 1E-08 3.6E-13 72.7 2.1 52 160-216 7-58 (66)
33 2yql_A PHD finger protein 21A; 98.6 1.3E-08 4.5E-13 69.9 2.5 50 158-212 6-55 (56)
34 2l43_A N-teminal domain from h 98.6 6.8E-09 2.3E-13 77.8 1.0 53 160-215 24-77 (88)
35 2yt5_A Metal-response element- 98.6 1.4E-08 4.7E-13 71.3 1.4 57 159-215 4-63 (66)
36 3asl_A E3 ubiquitin-protein li 98.5 5.6E-08 1.9E-12 70.0 4.2 50 163-213 20-69 (70)
37 2puy_A PHD finger protein 21A; 98.5 9.4E-09 3.2E-13 71.4 -0.2 51 159-214 3-53 (60)
38 2lri_C Autoimmune regulator; Z 98.5 1.2E-07 4.2E-12 67.7 4.1 50 160-214 11-60 (66)
39 2e6s_A E3 ubiquitin-protein li 98.4 3.6E-07 1.2E-11 67.1 4.5 50 162-212 27-76 (77)
40 4gne_A Histone-lysine N-methyl 98.3 4.8E-07 1.6E-11 70.4 3.4 45 160-211 14-60 (107)
41 3shb_A E3 ubiquitin-protein li 98.2 8.7E-07 3E-11 65.1 3.9 51 161-212 26-76 (77)
42 3rsn_A SET1/ASH2 histone methy 98.2 1.3E-06 4.6E-11 73.4 5.5 53 160-213 4-59 (177)
43 1wev_A Riken cDNA 1110020M19; 98.2 2.5E-07 8.7E-12 69.1 0.6 55 159-214 14-73 (88)
44 3ask_A E3 ubiquitin-protein li 98.1 1.5E-06 5E-11 75.6 3.9 52 161-213 174-225 (226)
45 3v43_A Histone acetyltransfera 98.1 2.5E-06 8.4E-11 65.8 4.4 50 163-213 63-112 (112)
46 4bbq_A Lysine-specific demethy 98.0 1.4E-06 4.9E-11 66.8 2.0 51 164-214 62-115 (117)
47 2ysm_A Myeloid/lymphoid or mix 98.0 2.2E-06 7.5E-11 65.5 2.9 51 163-215 56-106 (111)
48 1fp0_A KAP-1 corepressor; PHD 98.0 8.8E-06 3E-10 61.4 5.2 51 159-214 23-73 (88)
49 2kwj_A Zinc finger protein DPF 97.9 3E-06 1E-10 65.6 2.2 49 163-213 60-108 (114)
50 2ysm_A Myeloid/lymphoid or mix 97.6 4.5E-05 1.5E-09 58.2 4.3 50 160-211 6-55 (111)
51 3v43_A Histone acetyltransfera 97.2 8.1E-05 2.8E-09 57.2 1.2 51 161-211 5-62 (112)
52 2kwj_A Zinc finger protein DPF 96.8 0.00021 7E-09 55.2 0.2 50 162-211 2-59 (114)
53 2lbm_A Transcriptional regulat 96.5 0.0013 4.5E-08 53.3 2.7 53 157-213 59-117 (142)
54 3ql9_A Transcriptional regulat 95.8 0.003 1E-07 50.4 1.9 54 156-213 52-111 (129)
55 2kiz_A E3 ubiquitin-protein li 94.3 0.019 6.4E-07 38.9 2.1 49 159-213 12-60 (69)
56 1iym_A EL5; ring-H2 finger, ub 94.3 0.036 1.2E-06 35.8 3.2 47 162-213 6-52 (55)
57 2ect_A Ring finger protein 126 92.5 0.11 3.9E-06 35.8 3.6 48 160-213 14-61 (78)
58 2ecm_A Ring finger and CHY zin 92.4 0.065 2.2E-06 34.4 2.1 48 161-213 5-52 (55)
59 2l0b_A E3 ubiquitin-protein li 91.7 0.075 2.6E-06 38.4 1.9 49 159-213 38-86 (91)
60 1x4j_A Ring finger protein 38; 91.3 0.081 2.8E-06 36.5 1.7 48 160-213 22-69 (75)
61 2ep4_A Ring finger protein 24; 90.8 0.16 5.4E-06 34.7 2.8 47 161-213 15-61 (74)
62 2e61_A Zinc finger CW-type PWW 90.1 0.23 8E-06 35.5 3.3 33 174-209 15-49 (69)
63 1v87_A Deltex protein 2; ring- 89.8 0.13 4.4E-06 38.0 1.8 50 163-212 27-90 (114)
64 2d8s_A Cellular modulator of i 89.6 0.24 8.2E-06 35.7 3.1 49 162-213 16-67 (80)
65 2csy_A Zinc finger protein 183 88.1 0.31 1.1E-05 33.9 2.7 47 158-213 12-58 (81)
66 1wil_A KIAA1045 protein; ring 87.6 0.21 7.3E-06 37.5 1.7 50 161-212 15-75 (89)
67 2ct2_A Tripartite motif protei 87.3 0.45 1.5E-05 33.1 3.2 51 160-213 14-65 (88)
68 2l7p_A Histone-lysine N-methyl 87.3 0.29 9.8E-06 37.5 2.3 36 172-209 23-58 (100)
69 2d8t_A Dactylidin, ring finger 84.7 0.69 2.4E-05 31.3 3.0 45 160-213 14-58 (71)
70 2yur_A Retinoblastoma-binding 83.4 0.88 3E-05 31.2 3.1 49 160-214 14-62 (74)
71 2lq6_A Bromodomain-containing 83.1 0.68 2.3E-05 34.0 2.5 33 159-193 15-49 (87)
72 2ysl_A Tripartite motif-contai 82.6 2.6 8.9E-05 28.2 5.2 49 160-214 19-67 (73)
73 1bor_A Transcription factor PM 80.6 0.7 2.4E-05 30.3 1.7 43 159-213 4-46 (56)
74 2egp_A Tripartite motif-contai 80.6 1.3 4.6E-05 30.0 3.2 50 160-213 11-62 (79)
75 2ecl_A Ring-box protein 2; RNF 77.3 0.44 1.5E-05 33.6 -0.2 45 164-213 18-73 (81)
76 3k1l_B Fancl; UBC, ring, RWD, 76.4 3.6 0.00012 38.1 5.5 55 159-213 306-370 (381)
77 2ecj_A Tripartite motif-contai 75.7 2 6.9E-05 27.3 2.8 45 160-210 14-58 (58)
78 2djb_A Polycomb group ring fin 74.3 1.5 5E-05 29.8 1.8 46 160-213 14-59 (72)
79 2ysj_A Tripartite motif-contai 74.2 2.2 7.6E-05 27.9 2.7 45 160-210 19-63 (63)
80 3lrq_A E3 ubiquitin-protein li 74.0 1.1 3.8E-05 32.6 1.3 47 160-213 21-67 (100)
81 2ecv_A Tripartite motif-contai 74.0 1.1 3.8E-05 30.5 1.2 49 161-213 19-68 (85)
82 2ea6_A Ring finger protein 4; 72.9 0.89 3.1E-05 30.0 0.5 49 161-214 15-66 (69)
83 3dpl_R Ring-box protein 1; ubi 72.4 1.8 6.1E-05 32.6 2.1 46 163-213 39-98 (106)
84 2ecw_A Tripartite motif-contai 71.4 2.5 8.5E-05 28.7 2.5 49 161-213 19-68 (85)
85 2ckl_B Ubiquitin ligase protei 71.1 1.6 5.5E-05 34.3 1.7 47 160-213 53-99 (165)
86 2ecy_A TNF receptor-associated 69.6 1.6 5.6E-05 28.9 1.2 46 160-213 14-59 (66)
87 1e4u_A Transcriptional repress 69.2 1.8 6.3E-05 30.6 1.5 48 161-213 11-59 (78)
88 3ng2_A RNF4, snurf, ring finge 66.7 0.75 2.6E-05 30.7 -1.0 48 161-213 10-60 (71)
89 2xeu_A Ring finger protein 4; 66.7 1.1 3.6E-05 29.1 -0.3 48 161-213 3-53 (64)
90 3ztg_A E3 ubiquitin-protein li 65.8 2.4 8.3E-05 29.8 1.5 49 159-213 11-59 (92)
91 2ckl_A Polycomb group ring fin 64.6 2.7 9.3E-05 30.6 1.6 46 160-213 14-59 (108)
92 3a1b_A DNA (cytosine-5)-methyl 63.5 3.1 0.00011 34.2 1.9 55 156-214 74-135 (159)
93 1t1h_A Gspef-atpub14, armadill 63.3 4.1 0.00014 27.7 2.3 46 160-213 7-52 (78)
94 2y43_A E3 ubiquitin-protein li 62.9 3.5 0.00012 29.4 2.0 46 160-213 21-66 (99)
95 1chc_A Equine herpes virus-1 r 62.2 2.1 7.1E-05 28.3 0.5 44 162-213 6-49 (68)
96 1v5n_A PDI-like hypothetical p 61.1 5.4 0.00019 29.1 2.7 37 162-200 48-84 (89)
97 4a0k_B E3 ubiquitin-protein li 60.3 2.2 7.4E-05 32.9 0.4 46 163-213 50-109 (117)
98 2pv0_B DNA (cytosine-5)-methyl 59.9 2.4 8.3E-05 39.2 0.7 60 151-214 83-149 (386)
99 4ayc_A E3 ubiquitin-protein li 59.3 3.2 0.00011 31.8 1.2 43 162-213 54-96 (138)
100 2ecn_A Ring finger protein 141 58.6 2.1 7.3E-05 28.5 0.1 42 161-212 15-56 (70)
101 3l11_A E3 ubiquitin-protein li 55.7 4.1 0.00014 29.9 1.3 46 160-213 14-59 (115)
102 1jm7_A BRCA1, breast cancer ty 55.3 3.9 0.00013 29.5 1.1 47 161-213 21-67 (112)
103 2a20_A Regulating synaptic mem 54.9 5 0.00017 28.2 1.5 54 160-214 8-61 (62)
104 2lcq_A Putative toxin VAPC6; P 52.5 11 0.00036 29.8 3.3 24 74-97 85-111 (165)
105 3fl2_A E3 ubiquitin-protein li 52.4 3.5 0.00012 30.8 0.4 46 161-214 52-97 (124)
106 3nw0_A Non-structural maintena 52.3 6.3 0.00022 33.6 2.1 46 161-212 180-225 (238)
107 1vyx_A ORF K3, K3RING; zinc-bi 48.5 4.6 0.00016 27.2 0.5 50 160-213 5-56 (60)
108 2ct0_A Non-SMC element 1 homol 43.7 14 0.00048 26.1 2.5 46 162-213 16-61 (74)
109 2fiy_A Protein FDHE homolog; F 41.5 8.8 0.0003 34.2 1.3 30 160-189 181-220 (309)
110 1zbd_B Rabphilin-3A; G protein 40.6 13 0.00044 29.3 2.0 52 161-213 55-107 (134)
111 2vrw_B P95VAV, VAV1, proto-onc 39.5 23 0.00078 31.3 3.7 37 159-195 355-392 (406)
112 1ptq_A Protein kinase C delta 37.3 28 0.00094 21.8 2.9 37 160-196 10-47 (50)
113 2jne_A Hypothetical protein YF 37.0 10 0.00035 29.0 0.9 51 162-212 33-89 (101)
114 3hct_A TNF receptor-associated 36.9 14 0.00048 27.2 1.6 46 160-213 17-62 (118)
115 1g25_A CDK-activating kinase a 36.3 9.2 0.00031 25.0 0.5 50 161-214 3-53 (65)
116 1jm7_B BARD1, BRCA1-associated 36.2 17 0.00058 26.7 2.0 44 160-213 21-64 (117)
117 4ap4_A E3 ubiquitin ligase RNF 34.0 7.3 0.00025 28.4 -0.4 49 160-213 6-57 (133)
118 2fnf_X Putative RAS effector N 33.4 39 0.0013 23.5 3.4 36 159-196 33-68 (72)
119 1k81_A EIF-2-beta, probable tr 32.7 12 0.0004 23.2 0.5 23 163-185 2-29 (36)
120 1faq_A RAF-1; transferase, ser 32.6 32 0.0011 21.7 2.7 34 160-196 13-46 (52)
121 1weq_A PHD finger protein 7; s 32.0 47 0.0016 24.4 3.7 34 175-212 44-78 (85)
122 1z6u_A NP95-like ring finger p 31.7 18 0.00063 28.2 1.6 46 160-213 77-122 (150)
123 2yuu_A NPKC-delta, protein kin 31.2 51 0.0018 23.1 3.8 37 159-195 26-63 (83)
124 2enz_A NPKC-theta, protein kin 30.7 44 0.0015 22.3 3.2 37 160-196 22-59 (65)
125 2enn_A NPKC-theta, protein kin 30.5 51 0.0017 22.9 3.6 38 159-196 32-70 (77)
126 2l6l_A DNAJ homolog subfamily 30.3 14 0.00047 28.8 0.7 32 157-189 108-145 (155)
127 2pk7_A Uncharacterized protein 29.9 28 0.00094 24.5 2.1 31 160-190 7-39 (69)
128 6rxn_A Rubredoxin; electron tr 29.3 28 0.00097 22.7 1.9 13 202-214 28-40 (46)
129 2eli_A Protein kinase C alpha 28.8 68 0.0023 22.7 4.1 37 160-196 27-64 (85)
130 2hf1_A Tetraacyldisaccharide-1 28.6 24 0.00081 24.7 1.6 30 161-190 8-39 (68)
131 2jr6_A UPF0434 protein NMA0874 28.4 27 0.00094 24.4 1.9 31 160-190 7-39 (68)
132 1nee_A EIF-2-beta, probable tr 27.7 27 0.00091 27.7 1.9 24 162-185 103-131 (138)
133 1rmd_A RAG1; V(D)J recombinati 27.6 19 0.00066 26.2 1.0 45 161-213 23-67 (116)
134 2jr7_A DPH3 homolog; DESR1, CS 26.6 18 0.00063 26.8 0.7 34 157-191 19-59 (89)
135 1wim_A KIAA0161 protein; ring 26.5 25 0.00085 24.7 1.4 52 161-213 5-61 (94)
136 2kpi_A Uncharacterized protein 26.4 24 0.00083 23.7 1.2 31 160-190 9-41 (56)
137 2js4_A UPF0434 protein BB2007; 26.3 27 0.00092 24.6 1.5 31 160-190 7-39 (70)
138 2kr4_A Ubiquitin conjugation f 26.3 47 0.0016 23.2 2.8 46 159-213 12-57 (85)
139 3uk3_C Zinc finger protein 217 25.2 54 0.0018 19.6 2.7 9 204-212 32-40 (57)
140 3hcs_A TNF receptor-associated 25.1 28 0.00096 27.0 1.6 46 160-213 17-62 (170)
141 2jny_A Uncharacterized BCR; st 24.5 35 0.0012 23.9 1.8 31 160-190 9-41 (67)
142 1yop_A KTI11P; zinc finger, me 23.8 23 0.00079 25.9 0.8 31 158-189 20-57 (83)
143 2d74_B Translation initiation 23.6 29 0.00099 27.9 1.4 24 162-185 105-133 (148)
144 3ddl_A Xanthorhodopsin; carote 23.4 17 0.00059 31.6 0.0 46 65-113 18-63 (273)
145 1y8f_A UNC-13 homolog A, MUNC1 23.2 53 0.0018 22.1 2.5 37 160-196 23-60 (66)
146 3uej_A NPKC-delta, protein kin 22.6 66 0.0023 21.4 2.9 37 160-196 19-56 (65)
147 1rfh_A RAS association (ralgds 22.3 44 0.0015 22.2 1.9 36 159-196 20-55 (59)
148 2akl_A PHNA-like protein PA012 22.3 34 0.0012 27.4 1.5 26 162-187 28-55 (138)
149 1kbe_A Kinase suppressor of RA 21.9 52 0.0018 21.5 2.2 31 162-195 15-45 (49)
150 2d8v_A Zinc finger FYVE domain 21.8 54 0.0019 23.3 2.3 30 158-192 5-35 (67)
151 2lce_A B-cell lymphoma 6 prote 21.7 96 0.0033 19.7 3.5 12 161-172 17-28 (74)
152 2xzl_A ATP-dependent helicase 21.3 46 0.0016 32.8 2.6 27 161-189 11-37 (802)
153 3ky9_A Proto-oncogene VAV; cal 21.2 65 0.0022 30.1 3.5 37 159-195 527-564 (587)
154 2jrp_A Putative cytoplasmic pr 21.1 54 0.0018 23.9 2.3 26 162-187 3-28 (81)
155 1wge_A Hypothetical protein 26 20.9 44 0.0015 24.4 1.8 33 157-190 26-65 (83)
156 3olj_A Ribonucleoside-diphosph 20.8 35 0.0012 29.5 1.4 37 70-109 105-141 (286)
157 2db6_A SH3 and cysteine rich d 20.7 30 0.001 24.0 0.8 38 159-196 26-64 (74)
158 2kre_A Ubiquitin conjugation f 20.6 1.2E+02 0.0042 21.8 4.2 46 159-213 27-72 (100)
159 1bbo_A Human enhancer-binding 20.6 72 0.0025 19.0 2.6 9 204-212 29-37 (57)
160 2k5c_A Uncharacterized protein 20.5 26 0.0009 26.1 0.5 22 84-105 61-82 (95)
161 4rxn_A Rubredoxin; electron tr 20.3 48 0.0016 22.3 1.8 14 201-214 33-46 (54)
No 1
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.73 E-value=7e-19 Score=124.03 Aligned_cols=60 Identities=70% Similarity=1.408 Sum_probs=53.1
Q ss_pred ccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcCCCC
Q 027884 158 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRGRQ 217 (217)
Q Consensus 158 e~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr~r~ 217 (217)
+.+..+|++|+++|+++++|||||.|+.|||+.|||++...++.++.|+|+.|..|++|+
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~~~ 62 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSGPS 62 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTCSS
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCCCC
Confidence 345678999999998789999999999999999999998877667899999999998874
No 2
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.62 E-value=2.4e-16 Score=115.74 Aligned_cols=57 Identities=37% Similarity=0.898 Sum_probs=49.5
Q ss_pred cccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
.+.+..+| +|+++|+++++|||||.|+.|||+.||+++...+..++.|+|+.|..++
T Consensus 8 ~~~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 8 MALVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred ccCCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 34556677 9999998789999999999999999999998877667899999999754
No 3
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.60 E-value=2e-16 Score=116.21 Aligned_cols=58 Identities=22% Similarity=0.610 Sum_probs=48.4
Q ss_pred cccCCceeCccCCCCCCCCceEecc--CCCCeeeccccccCcccc----CCCCeEEcCCCCCcCCC
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKITPAKA----ENIKQYKCPSCSMKRGR 216 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgIt~~~a----~~~d~y~Cp~C~~kr~r 216 (217)
++.+.++| +|+++++ +++||||| .|+.|||+.||||+...+ ..+++|+|+.|..++.+
T Consensus 12 ~~~~~~~C-iC~~~~~-~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 12 QPEIKVRC-VCGNSLE-TDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp SCCCCCCC-SSCCCCC-CSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CCCCCEEe-ECCCcCC-CCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 33566777 9999965 67999999 999999999999998764 34679999999987754
No 4
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=99.59 E-value=7.5e-17 Score=117.52 Aligned_cols=57 Identities=35% Similarity=0.911 Sum_probs=48.8
Q ss_pred cccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
.+.+..+| +|+++|+++++|||||.|+.|||+.|||++...+..++.|+|+.|..+.
T Consensus 6 ~~~~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 6 MATVPVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp TCCCCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred CCCCeeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 34556677 9999998789999999999999999999998877666889999998653
No 5
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=99.59 E-value=2.5e-16 Score=113.79 Aligned_cols=58 Identities=26% Similarity=0.588 Sum_probs=47.9
Q ss_pred CCcccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 155 EEDEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 155 edee~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
++++.+..+| +|+++++++.+|||||.|+.|||+.||+++...+ .++.|+|+.|..++
T Consensus 10 ~~~~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~-~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 10 RGVDNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADA-LPSKFLCFRCIELS 67 (72)
T ss_dssp CSSCSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSC-CCSCCCCHHHHHHC
T ss_pred CCCCCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCcccc-CCCcEECCCccCCC
Confidence 3445666788 9999987677999999999999999999997543 35789999998765
No 6
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=99.57 E-value=7.6e-17 Score=115.49 Aligned_cols=54 Identities=28% Similarity=0.680 Sum_probs=44.8
Q ss_pred cCCceeCccCCCCCCCCceEecc-CCCCeeeccccccCccccCCC-----CeEEcCCCCC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCD-ICERWFHGKCVKITPAKAENI-----KQYKCPSCSM 212 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD-~Ce~WfH~~CVgIt~~~a~~~-----d~y~Cp~C~~ 212 (217)
.....|++|++||+++.+||+|| .|++|||+.||||++..+..+ ..|+|+.|.+
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~~ 65 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCMA 65 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHHC
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCccC
Confidence 34557999999999899999999 999999999999998765433 3899999863
No 7
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.54 E-value=3.5e-16 Score=113.83 Aligned_cols=55 Identities=42% Similarity=0.995 Sum_probs=45.3
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccC----CCCeEEcCCCCCcCC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAE----NIKQYKCPSCSMKRG 215 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~----~~d~y~Cp~C~~kr~ 215 (217)
.+..+| +|+++++ +++|||||.|+.|||+.|||++...+. ..+.|+|+.|..++.
T Consensus 14 ~~~~~C-~C~~~~~-~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~ 72 (76)
T 1wem_A 14 PNALYC-ICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSG 72 (76)
T ss_dssp TTCCCS-TTCCCCC-SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSC
T ss_pred CCCCEE-ECCCccC-CCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccC
Confidence 345677 9999997 779999999999999999999976532 236899999987654
No 8
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=99.54 E-value=1.1e-15 Score=104.48 Aligned_cols=49 Identities=35% Similarity=0.905 Sum_probs=42.2
Q ss_pred ceeCccCCCCCCCCceEecc-CCCCeeeccccccCccccCCCCeEEcCCCC
Q 027884 162 TLCGSCGGNYNADEFWIGCD-ICERWFHGKCVKITPAKAENIKQYKCPSCS 211 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD-~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~ 211 (217)
.-|++|++||+++++||+|| .|+.|||+.|||++...+.. ++|+|+.|+
T Consensus 3 c~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~-~~~~C~~C~ 52 (52)
T 2kgg_A 3 CAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAEN-EDYICINCA 52 (52)
T ss_dssp CSCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHH-SCCCCSCC-
T ss_pred ccCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCC-CCEECCCCC
Confidence 34779999998889999999 89999999999999875543 689999995
No 9
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=99.53 E-value=1.9e-15 Score=108.89 Aligned_cols=53 Identities=23% Similarity=0.561 Sum_probs=44.9
Q ss_pred cccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
++....+| +|+++++ +++|||||.|+.|||+.|||++...+ ++.|+|+.|...
T Consensus 15 ~~~~~~~C-iC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~~~--~~~~~C~~C~~s 67 (68)
T 3o70_A 15 YFQGLVTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNV--PEVFVCQKCRDS 67 (68)
T ss_dssp TTTTCCCS-TTCCCCT-TCCEEECTTTCCEEETTTTTCCTTSC--CSSCCCHHHHTC
T ss_pred CCCCceEe-ECCCcCC-CCCEEECCCCCccccccccCcCcccC--CCcEECCCCCCC
Confidence 33456677 9999987 88999999999999999999998644 478999999865
No 10
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=99.51 E-value=2.3e-15 Score=107.81 Aligned_cols=55 Identities=25% Similarity=0.658 Sum_probs=44.1
Q ss_pred cCCceeCccCCCCCCCCceEecc--CCCCeeeccccccCccccCC---CCeEEcCCCCCcCC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKITPAKAEN---IKQYKCPSCSMKRG 215 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgIt~~~a~~---~d~y~Cp~C~~kr~ 215 (217)
...++| +|+.+++ +++||+|| .|+.|||+.||||+...+.. +++|+|+.|+.+|+
T Consensus 8 e~~v~C-~C~~~~~-~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r~ 67 (68)
T 2rsd_A 8 EAKVRC-ICSSTMV-NDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLSRA 67 (68)
T ss_dssp SCEECC-TTCCCSC-CSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHHT
T ss_pred CCCEEe-ECCCCcC-CCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCccc
Confidence 344666 9999876 77999999 49999999999998765433 35899999987764
No 11
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.50 E-value=3.6e-14 Score=107.95 Aligned_cols=55 Identities=36% Similarity=0.763 Sum_probs=44.2
Q ss_pred CcccCCceeCccCCCCCCCCceEeccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcCCC
Q 027884 156 EDEHSETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKRGR 216 (217)
Q Consensus 156 dee~~~~~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr~r 216 (217)
.++....+| +|+++++ ++||+||. |. .|||+.||+|+... ..+|+|+.|..++.|
T Consensus 31 ~d~~e~~yC-iC~~~~~--g~MI~CD~~dC~~~WfH~~CVgl~~~p---~g~W~Cp~C~~~~~k 88 (91)
T 1weu_A 31 VDPNEPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKP---RGKWFCPRCSQESGP 88 (91)
T ss_dssp CCSCCCBCS-TTCCBCC--SCCCCCSCSSCSCCCCCSTTTTCSSCC---CSSCCCTTTCCCCSS
T ss_pred cCCCCCcEE-ECCCCCC--CCEeEecCCCCCCCCEecccCCcCcCC---CCCEECcCccCcCCc
Confidence 344566777 9999874 58999999 76 89999999998753 368999999987654
No 12
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=99.48 E-value=8e-15 Score=99.98 Aligned_cols=47 Identities=26% Similarity=0.687 Sum_probs=41.0
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
++| +|+++++ +++|||||.|+.|||+.|||++...+ ++.|+|+.|..
T Consensus 5 ~~C-~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~~~--~~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNV--PEVFVCQKCRD 51 (52)
T ss_dssp BCS-TTCCBCT-TCCEEECTTTCCEEETTTTTCCGGGC--CSSCCCHHHHT
T ss_pred eEE-EeCCcCC-CCCEEEcCCCCccccccccCCCcccC--CCcEECcCCCC
Confidence 445 9999987 88999999999999999999998754 47899999964
No 13
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=99.47 E-value=2.7e-15 Score=116.12 Aligned_cols=54 Identities=28% Similarity=0.708 Sum_probs=46.5
Q ss_pred CceeCccCCCCCCCCceEecc-CCCCeeeccccccCccccCCC-----CeEEcCCCCCcC
Q 027884 161 ETLCGSCGGNYNADEFWIGCD-ICERWFHGKCVKITPAKAENI-----KQYKCPSCSMKR 214 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD-~Ce~WfH~~CVgIt~~~a~~~-----d~y~Cp~C~~kr 214 (217)
...|++|+++|+++++||+|| .|++|||+.||||+...+..+ ..|+|+.|..++
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 357999999998888999998 999999999999998654433 789999998755
No 14
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.47 E-value=1.1e-14 Score=105.26 Aligned_cols=54 Identities=35% Similarity=0.764 Sum_probs=45.6
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
....+|.+|+++++ +++||+||.|+.|||..||+++...++ ...|+|+.|..+.
T Consensus 16 ~~~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~-~~~w~C~~C~~~~ 69 (75)
T 2k16_A 16 NQIWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPE-EMQWFCPKCANKI 69 (75)
T ss_dssp CEEECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCS-SSCCCCTTTHHHH
T ss_pred CCCcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCC-CCCEEChhccCch
Confidence 45567999999986 779999999999999999999887654 3689999998754
No 15
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.44 E-value=9.5e-14 Score=100.82 Aligned_cols=54 Identities=37% Similarity=0.789 Sum_probs=43.4
Q ss_pred cccCCceeCccCCCCCCCCceEeccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcCCC
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKRGR 216 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr~r 216 (217)
++....+| +|+++++ ++||+||. |. .|||+.||+|+... ..+|+|+.|..++.|
T Consensus 12 d~~~~~~C-~C~~~~~--g~MI~CD~~~C~~~wfH~~Cvgl~~~p---~g~w~Cp~C~~~~~k 68 (71)
T 1wen_A 12 DPNEPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKP---RGKWFCPRCSQESGP 68 (71)
T ss_dssp CTTSCCCS-TTCCCSC--SSEECCSCSSCSCCCEETTTTTCSSCC---SSCCCCTTTSSCSSS
T ss_pred CCCCCCEE-ECCCCCC--CCEeEeeCCCCCCccEecccCCcCcCC---CCCEECCCCCccccc
Confidence 34456677 9999874 58999999 77 79999999998753 267999999986654
No 16
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.39 E-value=3.2e-13 Score=103.09 Aligned_cols=51 Identities=31% Similarity=0.724 Sum_probs=42.7
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
+.+.| +|+.+++ +++||+||.|..|||..|++++...+ ++.|+|+.|..++
T Consensus 27 d~vrC-iC~~~~~-~~~mi~Cd~C~~w~H~~C~~~~~~~~--p~~w~C~~C~~~~ 77 (98)
T 2lv9_A 27 DVTRC-ICGFTHD-DGYMICCDKCSVWQHIDCMGIDRQHI--PDTYLCERCQPRN 77 (98)
T ss_dssp CBCCC-TTSCCSC-SSCEEEBTTTCBEEETTTTTCCTTSC--CSSBCCTTTSSSC
T ss_pred CCEEe-ECCCccC-CCcEEEcCCCCCcCcCcCCCCCccCC--CCCEECCCCcCCC
Confidence 34567 9999886 78999999999999999999986654 3579999998654
No 17
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.37 E-value=6.6e-14 Score=99.23 Aligned_cols=52 Identities=33% Similarity=0.681 Sum_probs=40.5
Q ss_pred cccCCceeCccCCCCCCCCceEeccCCC---CeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCDICE---RWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD~Ce---~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
+.....+| +|+++++ ++||+||.|+ +|||+.|||++... .++|+||.|..+|
T Consensus 7 d~~e~~yC-~C~~~~~--g~MI~CD~c~C~~~WfH~~Cvgl~~~p---~~~w~Cp~C~~~r 61 (62)
T 2g6q_A 7 DPNEPTYC-LCNQVSY--GEMIGCDNEQCPIEWFHFSCVSLTYKP---KGKWYCPKCRGDN 61 (62)
T ss_dssp ---CCEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCC---SSCCCCHHHHTCC
T ss_pred CCCCCcEE-ECCCCCC--CCeeeeeCCCCCcccEecccCCcCcCC---CCCEECcCcccCC
Confidence 33455667 9999864 5899999954 99999999998753 4689999998765
No 18
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=99.35 E-value=4.3e-14 Score=115.78 Aligned_cols=55 Identities=38% Similarity=1.020 Sum_probs=46.9
Q ss_pred ccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 158 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 158 e~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+....+| +|+++++++++||+||.|+.|||+.|+|++...+...+.|+|+.|..+
T Consensus 5 ~~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 5 SDTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp --CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 3456778 999999878899999999999999999998876666789999999864
No 19
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.34 E-value=7.4e-14 Score=132.51 Aligned_cols=55 Identities=38% Similarity=1.017 Sum_probs=48.0
Q ss_pred ccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 158 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 158 e~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+....+| +|+++|+++++|||||.|+.|||+.|||++...+..++.|+|+.|..+
T Consensus 34 ~~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 34 PPPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 3455666 999999878999999999999999999999987766789999999854
No 20
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.34 E-value=1.5e-13 Score=96.46 Aligned_cols=50 Identities=34% Similarity=0.804 Sum_probs=40.1
Q ss_pred cCCceeCccCCCCCCCCceEeccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
.+..+| +|+++++ ++||+||. |. +|||+.|||++.... ++|+|+.|..+|
T Consensus 7 ~e~~yC-~C~~~~~--g~mi~CD~~~C~~~wfH~~Cvgl~~~p~---~~w~Cp~C~~~r 59 (59)
T 3c6w_A 7 NEPTYC-LCHQVSY--GEMIGCDNPDCPIEWFHFACVDLTTKPK---GKWFCPRCVQEK 59 (59)
T ss_dssp -CCEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCCS---SCCCCHHHHCC-
T ss_pred CCCcEE-ECCCCCC--CCeeEeeCCCCCCCCEecccCCcccCCC---CCEECcCccCcC
Confidence 345667 9999874 58999999 77 799999999987542 579999998765
No 21
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.31 E-value=2.7e-13 Score=95.25 Aligned_cols=51 Identities=37% Similarity=0.800 Sum_probs=39.1
Q ss_pred ccCCceeCccCCCCCCCCceEeccC--CC-CeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 158 EHSETLCGSCGGNYNADEFWIGCDI--CE-RWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 158 e~~~~~C~iC~~py~~d~~mIqCD~--Ce-~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
+....+| +|+++++ ++||+||. |. .|||+.|||++... ...|+|+.|..+|
T Consensus 7 ~~e~~~C-~C~~~~~--g~mi~CD~cdC~~~wfH~~Cvgl~~~p---~g~w~C~~C~~~r 60 (60)
T 2vnf_A 7 PNEPTYC-LCHQVSY--GEMIGCDNPDCSIEWFHFACVGLTTKP---RGKWFCPRCSQER 60 (60)
T ss_dssp --CCEET-TTTEECC--SEEEECSCTTCSSCEEETGGGTCSSCC---SSCCCCHHHHC--
T ss_pred CCCCCEE-ECCCcCC--CCEEEeCCCCCCCceEehhcCCCCcCC---CCCEECcCccCcC
Confidence 3445667 9999874 68999999 65 89999999998753 2689999998765
No 22
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.29 E-value=1.6e-13 Score=129.23 Aligned_cols=55 Identities=38% Similarity=1.001 Sum_probs=48.1
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
....+| +|+++|+++++|||||.|+.|||+.|||++...+..++.|+|+.|..++
T Consensus 3 ~~~~yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 3 SVPVYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp CCCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred CCCeEE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcccc
Confidence 345666 9999998789999999999999999999999877777899999998643
No 23
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.23 E-value=2e-12 Score=98.19 Aligned_cols=50 Identities=26% Similarity=0.622 Sum_probs=39.6
Q ss_pred cccCCceeCccCCCCCCCCceEeccCCC---CeeeccccccCccccCCCCeEEcCC-CCC
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCDICE---RWFHGKCVKITPAKAENIKQYKCPS-CSM 212 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD~Ce---~WfH~~CVgIt~~~a~~~d~y~Cp~-C~~ 212 (217)
++....+| +|++++. ++||+||.|+ .|||+.||||+... .+.|+|+. |..
T Consensus 22 ~~~~~~yC-iC~~~~~--g~MI~CD~c~C~~eWfH~~CVgl~~~p---~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 22 NNQEEVYC-FCRNVSY--GPMVACDNPACPFEWFHYGCVGLKQAP---KGKWYCSKDCKE 75 (90)
T ss_dssp --CCSCCS-TTTCCCS--SSEECCCSSSCSCSCEETTTSSCSSCT---TSCCCSSHHHHH
T ss_pred CCCCCcEE-EeCCCCC--CCEEEecCCCCccccCcCccCCCCcCC---CCCccCChhhcc
Confidence 34456677 9999875 4799999977 99999999998753 26899999 874
No 24
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.19 E-value=1.1e-12 Score=95.04 Aligned_cols=48 Identities=33% Similarity=0.746 Sum_probs=39.5
Q ss_pred cCCceeCccCCCCCCCCceEeccCCC---CeeeccccccCccccCCCCeEEcCCCCC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICE---RWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce---~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
....+| +|+++++ ++||+||.|+ .|||+.||+|+... .+.|+|+.|..
T Consensus 4 ~~~~yC-~C~~~~~--g~MI~CD~cdC~~~WfH~~Cvgl~~~p---~~~w~Cp~C~~ 54 (70)
T 1x4i_A 4 GSSGYC-ICNQVSY--GEMVGCDNQDCPIEWFHYGCVGLTEAP---KGKWYCPQCTA 54 (70)
T ss_dssp SCCCCS-TTSCCCC--SSEECCSCTTCSCCCEEHHHHTCSSCC---SSCCCCHHHHH
T ss_pred CCCeEE-EcCCCCC--CCEeEeCCCCCCccCCcccccccCcCC---CCCEECCCCCc
Confidence 345667 9999864 4999999985 99999999998753 46899999975
No 25
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.03 E-value=5.5e-11 Score=113.93 Aligned_cols=43 Identities=30% Similarity=0.786 Sum_probs=39.1
Q ss_pred CCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 171 YNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 171 y~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.+++.+||+||.|+.|||+.|||++...++.+++|+||.|..+
T Consensus 52 ~n~~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~ 94 (528)
T 3pur_A 52 KKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPH 94 (528)
T ss_dssp TTSTTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHH
T ss_pred CCcCCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCC
Confidence 3468999999999999999999999998888899999999864
No 26
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=98.94 E-value=1.2e-10 Score=98.04 Aligned_cols=40 Identities=28% Similarity=0.773 Sum_probs=33.0
Q ss_pred ceEeccCCCCeeeccccccCccccCCC------CeEEcCCCCCcCC
Q 027884 176 FWIGCDICERWFHGKCVKITPAKAENI------KQYKCPSCSMKRG 215 (217)
Q Consensus 176 ~mIqCD~Ce~WfH~~CVgIt~~~a~~~------d~y~Cp~C~~kr~ 215 (217)
+|||||.|++|||++|+||+.+.++.+ ..|+|+.|+.+..
T Consensus 20 ~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 20 KMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 399999999999999999997544332 2799999998764
No 27
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.82 E-value=2e-09 Score=72.34 Aligned_cols=49 Identities=27% Similarity=0.649 Sum_probs=39.2
Q ss_pred eeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 163 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 163 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.|.+|++..+ ++.||.||.|+.|||..|++.....++. +.|+|+.|...
T Consensus 2 ~C~vC~~~~~-~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~-g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGE-DDKLILCDECNKAFHLFCLRPALYEVPD-GEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSC-CSCCEECTTTCCEECHHHHCTTCCSCCS-SCCSCTTTSCC
T ss_pred CCCCCCCCCC-CCCEEECCCCChhhCcccCCCCcCCCCC-CcEECcCcccc
Confidence 5889998865 6799999999999999999644333332 58999999864
No 28
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.74 E-value=7.6e-09 Score=72.50 Aligned_cols=52 Identities=27% Similarity=0.622 Sum_probs=41.2
Q ss_pred cccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
++..+.+|.+|++. +.||.||.|..|||..|++.....++ ...|+|+.|..+
T Consensus 7 ~~~~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~p~l~~~p-~g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG----GEIILCDTCPRAYHMVCLDPDMEKAP-EGKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCC----SSEEECSSSSCEEEHHHHCTTCCSCC-CSSCCCTTGGGG
T ss_pred cCCCCCCCccCCCC----CcEEECCCCChhhhhhccCCCCCCCC-CCceECcccccc
Confidence 34455679899973 58999999999999999998644443 368999999865
No 29
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.73 E-value=1.5e-09 Score=78.66 Aligned_cols=55 Identities=22% Similarity=0.535 Sum_probs=44.5
Q ss_pred CCceeCccCCCC-CCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcCCCC
Q 027884 160 SETLCGSCGGNY-NADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRGRQ 217 (217)
Q Consensus 160 ~~~~C~iC~~py-~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr~r~ 217 (217)
.+..|.+|++.. .+++.||.||.|+.|||..|+++.. ++ ...|+|+.|..+++++
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP-~g~W~C~~C~~~~~~p 70 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IP-EGQWLCRHCLQSRARP 70 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CC-SSCCCCHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CC-CCCcCCccCcCcCccC
Confidence 445699999875 3367999999999999999999874 22 3579999999887664
No 30
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.67 E-value=1.4e-08 Score=71.19 Aligned_cols=54 Identities=20% Similarity=0.566 Sum_probs=41.4
Q ss_pred ccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcCCC
Q 027884 158 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRGR 216 (217)
Q Consensus 158 e~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr~r 216 (217)
+..+.+|.+|+. ++.||.||.|..+||..|++......+ ...|+|+.|..+..+
T Consensus 6 d~~~~~C~vC~~----~g~ll~Cd~C~~~fH~~Cl~ppl~~~p-~g~W~C~~C~~~~~k 59 (61)
T 1mm2_A 6 DHHMEFCRVCKD----GGELLCCDTCPSSYHIHCLNPPLPEIP-NGEWLCPRCTCPALK 59 (61)
T ss_dssp CSSCSSCTTTCC----CSSCBCCSSSCCCBCSSSSSSCCSSCC-SSCCCCTTTTTTCCT
T ss_pred cCCCCcCCCCCC----CCCEEEcCCCCHHHcccccCCCcCcCC-CCccCChhhcCchhc
Confidence 345567989985 358999999999999999995443343 357999999987643
No 31
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=7e-09 Score=78.30 Aligned_cols=52 Identities=21% Similarity=0.553 Sum_probs=41.0
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|.+|++..+ ...||.||.|..|||..|++.....++ ...|+|+.|..+
T Consensus 15 ~~~~C~vC~~~~~-~~~ll~CD~C~~~~H~~Cl~Ppl~~~P-~g~W~C~~C~~~ 66 (92)
T 2e6r_A 15 DSYICQVCSRGDE-DDKLLFCDGCDDNYHIFCLLPPLPEIP-RGIWRCPKCILA 66 (92)
T ss_dssp CCCCCSSSCCSGG-GGGCEECTTTCCEECSSSSSSCCSSCC-SSCCCCHHHHHH
T ss_pred CCCCCccCCCcCC-CCCEEEcCCCCchhccccCCCCcccCC-CCCcCCccCcCc
Confidence 3456999999875 678999999999999999994433333 358999999864
No 32
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.62 E-value=1e-08 Score=72.65 Aligned_cols=52 Identities=27% Similarity=0.558 Sum_probs=40.3
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcCCC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRGR 216 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr~r 216 (217)
.+.+|.+|+.. +.||.||.|..|||..|++.....++. ..|+|+.|..++.+
T Consensus 7 ~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~ppl~~~P~-g~W~C~~C~~~~~~ 58 (66)
T 1xwh_A 7 NEDECAVCRDG----GELICCDGCPRAFHLACLSPPLREIPS-GTWRCSSCLQATVQ 58 (66)
T ss_dssp CCCSBSSSSCC----SSCEECSSCCCEECTTTSSSCCSSCCS-SCCCCHHHHHTCCC
T ss_pred CCCCCccCCCC----CCEEEcCCCChhhcccccCCCcCcCCC-CCeECccccCcccc
Confidence 45679999963 479999999999999999944333333 68999999976643
No 33
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=1.3e-08 Score=69.87 Aligned_cols=50 Identities=24% Similarity=0.600 Sum_probs=38.6
Q ss_pred ccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 027884 158 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 158 e~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
+..+.+|.+|++. +.||.||.|..|||..|++......+ ...|+|+.|..
T Consensus 6 ~~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~ppl~~~p-~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKS----GQLLMCDTCSRVYHLDCLDPPLKTIP-KGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCS----SCCEECSSSSCEECSSSSSSCCCSCC-CSSCCCHHHHC
T ss_pred CCCCCCCccCCCC----CeEEEcCCCCcceECccCCCCcCCCC-CCceEChhhhC
Confidence 3455679999974 48999999999999999994433333 35899999964
No 34
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.61 E-value=6.8e-09 Score=77.84 Aligned_cols=53 Identities=21% Similarity=0.526 Sum_probs=42.2
Q ss_pred CCceeCccCCCC-CCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcCC
Q 027884 160 SETLCGSCGGNY-NADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRG 215 (217)
Q Consensus 160 ~~~~C~iC~~py-~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr~ 215 (217)
.+..|.+|+... .+++.||.||.|..|||..|+++.. ++ ...|+|+.|..+..
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP-~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IP-EGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CC-SSCCCCHHHHHHTT
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cC-CCceECccccCccc
Confidence 446799999875 2367999999999999999999874 22 25899999987553
No 35
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.56 E-value=1.4e-08 Score=71.35 Aligned_cols=57 Identities=21% Similarity=0.498 Sum_probs=42.9
Q ss_pred cCCceeCccCCCCC-CCCceEeccCCCCeeeccccccCccc--cCCCCeEEcCCCCCcCC
Q 027884 159 HSETLCGSCGGNYN-ADEFWIGCDICERWFHGKCVKITPAK--AENIKQYKCPSCSMKRG 215 (217)
Q Consensus 159 ~~~~~C~iC~~py~-~d~~mIqCD~Ce~WfH~~CVgIt~~~--a~~~d~y~Cp~C~~kr~ 215 (217)
..+..|.+|+..+. .++.||.||.|..+||..|++..... ......|+|+.|..+.+
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 44567999998753 36899999999999999999974332 11235799999987653
No 36
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.54 E-value=5.6e-08 Score=69.98 Aligned_cols=50 Identities=26% Similarity=0.650 Sum_probs=38.7
Q ss_pred eeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 163 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 163 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.|.+|++..+ ++.||.||.|+.+||..|++.....++....|+|+.|..+
T Consensus 20 ~C~~C~~~~~-~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSC-GGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCC-CCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 5668888765 7899999999999999999943333333238999999864
No 37
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.53 E-value=9.4e-09 Score=71.45 Aligned_cols=51 Identities=24% Similarity=0.581 Sum_probs=39.2
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
..+.+|.+|++. +.||.||.|..|||..|++......+ ...|+|+.|..+.
T Consensus 3 ~~~~~C~vC~~~----g~ll~Cd~C~~~fH~~Cl~ppl~~~p-~g~W~C~~C~~~~ 53 (60)
T 2puy_A 3 IHEDFCSVCRKS----GQLLMCDTCSRVYHLDCLDPPLKTIP-KGMWICPRCQDQM 53 (60)
T ss_dssp CCCSSCTTTCCC----SSCEECSSSSCEECGGGSSSCCSSCC-CSCCCCHHHHHHH
T ss_pred CCCCCCcCCCCC----CcEEEcCCCCcCEECCcCCCCcCCCC-CCceEChhccChh
Confidence 345679999974 48999999999999999994333333 3589999997643
No 38
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.46 E-value=1.2e-07 Score=67.66 Aligned_cols=50 Identities=26% Similarity=0.549 Sum_probs=38.2
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
....|.+|+. ++.||.||.|..+||..|+...-...+. ..|+|+.|+..+
T Consensus 11 ~~~~C~vC~~----~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~-g~W~C~~C~~~~ 60 (66)
T 2lri_C 11 PGARCGVCGD----GTDVLRCTHCAAAFHWRCHFPAGTSRPG-TGLRCRSCSGDV 60 (66)
T ss_dssp TTCCCTTTSC----CTTCEECSSSCCEECHHHHCTTTCCCCS-SSCCCTTTTTCC
T ss_pred CCCCcCCCCC----CCeEEECCCCCCceecccCCCccCcCCC-CCEECccccCCC
Confidence 3456999984 3469999999999999999754443433 579999998654
No 39
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.35 E-value=3.6e-07 Score=67.06 Aligned_cols=50 Identities=28% Similarity=0.648 Sum_probs=39.1
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
..|.+|++..+ ++.||.||.|..+||..|++......+....|+|+.|..
T Consensus 27 c~C~vC~~~~~-~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHE-PNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCC-STTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCC-CCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 36889998765 789999999999999999994333333322799999974
No 40
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.25 E-value=4.8e-07 Score=70.37 Aligned_cols=45 Identities=27% Similarity=0.653 Sum_probs=35.4
Q ss_pred CCceeCccCCCCCCCCceEecc--CCCCeeeccccccCccccCCCCeEEcCCCC
Q 027884 160 SETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKITPAKAENIKQYKCPSCS 211 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~ 211 (217)
.+.+|.+|+. ++.||.|| .|..|||..|++++... ...|+||.|.
T Consensus 14 ~~~~C~~C~~----~G~ll~CD~~~Cp~~fH~~Cl~L~~~P---~g~W~Cp~c~ 60 (107)
T 4gne_A 14 HEDYCFQCGD----GGELVMCDKKDCPKAYHLLCLNLTQPP---YGKWECPWHQ 60 (107)
T ss_dssp SCSSCTTTCC----CSEEEECCSTTCCCEECTGGGTCSSCC---SSCCCCGGGB
T ss_pred CCCCCCcCCC----CCcEeEECCCCCCcccccccCcCCcCC---CCCEECCCCC
Confidence 4456888882 56899999 89999999999976532 3579999775
No 41
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.21 E-value=8.7e-07 Score=65.09 Aligned_cols=51 Identities=25% Similarity=0.619 Sum_probs=38.3
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
...|.+|++..+ .+.||.||.|+.+||..|++-.-..++..+.|+|+.|++
T Consensus 26 ~C~C~vC~~~~d-~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 26 VCACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTSBTTTCCCSC-GGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCcCCccCCCCC-CcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 335778888765 678999999999999999994333344333499999975
No 42
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=98.21 E-value=1.3e-06 Score=73.43 Aligned_cols=53 Identities=17% Similarity=0.447 Sum_probs=36.4
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCC---eEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIK---QYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d---~y~Cp~C~~k 213 (217)
...+| .|+++.+-+..|+||+.|.+|||..|++.........+ .|.|..|...
T Consensus 4 ~~~yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~ 59 (177)
T 3rsn_A 4 QAGSV-DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHS 59 (177)
T ss_dssp --------CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTT
T ss_pred eeeEE-EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCC
Confidence 34567 99998877899999999999999999986543332212 6899999863
No 43
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.19 E-value=2.5e-07 Score=69.08 Aligned_cols=55 Identities=18% Similarity=0.411 Sum_probs=41.8
Q ss_pred cCCceeCccCCCCCC-CCceEeccCCCCeeeccccccCccc----cCCCCeEEcCCCCCcC
Q 027884 159 HSETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITPAK----AENIKQYKCPSCSMKR 214 (217)
Q Consensus 159 ~~~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt~~~----a~~~d~y~Cp~C~~kr 214 (217)
..+.+|.+|++.... ++.+|.||.|...||..|.+..... .+ ...|+|+.|..+.
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p-~g~W~C~~C~~~~ 73 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDP-RLVWYCARCTRQM 73 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCT-TCCCCCHHHHHHH
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCC-CCCeeCccccchh
Confidence 356679999987643 4689999999999999999854331 22 3579999998643
No 44
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.11 E-value=1.5e-06 Score=75.60 Aligned_cols=52 Identities=25% Similarity=0.610 Sum_probs=36.2
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
...|.+|++..+ ++.|+.||.|..+||..|++..-...+....|+|+.|...
T Consensus 174 ~c~C~vC~~~~~-~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~~ 225 (226)
T 3ask_A 174 VCACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 225 (226)
T ss_dssp TTSCSSSCCCCC---CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC--
T ss_pred CCCCcCCCCCCC-CCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcCc
Confidence 447999998765 7799999999999999999843333333227999999753
No 45
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.09 E-value=2.5e-06 Score=65.84 Aligned_cols=50 Identities=24% Similarity=0.584 Sum_probs=37.8
Q ss_pred eeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 163 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 163 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.|.+|+....+++.++.||.|+.+||..|+.-.-...+. ..|+|+.|+.|
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~-~~W~C~~C~~k 112 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPK-GMWICQICRPR 112 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCS-SCCCCTTTSCC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCC-CCeECCCCCCc
Confidence 566788765446789999999999999999643333332 47999999865
No 46
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=98.03 E-value=1.4e-06 Score=66.84 Aligned_cols=51 Identities=18% Similarity=0.451 Sum_probs=36.7
Q ss_pred eCccCCCCCCCCceEeccCCCCeeeccccccCccc---cCCCCeEEcCCCCCcC
Q 027884 164 CGSCGGNYNADEFWIGCDICERWFHGKCVKITPAK---AENIKQYKCPSCSMKR 214 (217)
Q Consensus 164 C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~---a~~~d~y~Cp~C~~kr 214 (217)
|+.|...++.+..||+|+.|+.|||..|+++..+. .+.++.|.|+.|..+.
T Consensus 62 c~~c~~~~~~~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 62 VDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp BCCHHHHCCGGGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ccccccccccCcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 44555555556779999999999999999986542 2335679999998754
No 47
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.02 E-value=2.2e-06 Score=65.54 Aligned_cols=51 Identities=22% Similarity=0.610 Sum_probs=39.5
Q ss_pred eeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcCC
Q 027884 163 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKRG 215 (217)
Q Consensus 163 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr~ 215 (217)
.|.+|++..+ +..|+.||.|+++||..|++......+. +.|+|+.|...+.
T Consensus 56 ~C~~C~~~~~-~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~-g~W~C~~C~~c~~ 106 (111)
T 2ysm_A 56 VCQNCKQSGE-DSKMLVCDTCDKGYHTFCLQPVMKSVPT-NGWKCKNCRICIS 106 (111)
T ss_dssp CCTTTCCCSC-CTTEEECSSSCCEEEGGGSSSCCSSCCS-SCCCCHHHHCCSC
T ss_pred cccccCccCC-CCCeeECCCCCcHHhHHhcCCccccCCC-CCcCCcCCcCcCC
Confidence 5777888765 6789999999999999999844333333 5899999987553
No 48
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=97.97 E-value=8.8e-06 Score=61.38 Aligned_cols=51 Identities=24% Similarity=0.501 Sum_probs=38.0
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
..+.+|.+|++. +.++.||.|..-||..|+.-.....+ ...|+|+.|....
T Consensus 23 ~n~~~C~vC~~~----g~LL~CD~C~~~fH~~Cl~PpL~~~P-~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 23 DSATICRVCQKP----GDLVMCNQCEFCFHLDCHLPALQDVP-GEEWSCSLCHVLP 73 (88)
T ss_dssp SSSSCCSSSCSS----SCCEECTTSSCEECTTSSSTTCCCCC-SSSCCCCSCCCCC
T ss_pred CCCCcCcCcCCC----CCEEECCCCCCceecccCCCCCCCCc-CCCcCCccccCCC
Confidence 344579999964 36999999999999999943333333 2579999998543
No 49
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.93 E-value=3e-06 Score=65.58 Aligned_cols=49 Identities=29% Similarity=0.562 Sum_probs=38.0
Q ss_pred eeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 163 LCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 163 ~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.|.+|++..+ ++.||.||.|+.+||..|++..-..++ ...|+|+.|...
T Consensus 60 ~C~~C~~~~~-~~~ll~Cd~C~~~yH~~Cl~ppl~~~P-~g~W~C~~C~~~ 108 (114)
T 2kwj_A 60 SCILCGTSEN-DDQLLFCDDCDRGYHMYCLNPPVAEPP-EGSWSCHLCWEL 108 (114)
T ss_dssp CCTTTTCCTT-TTTEEECSSSCCEEETTTSSSCCSSCC-SSCCCCHHHHHH
T ss_pred ccCcccccCC-CCceEEcCCCCccccccccCCCccCCC-CCCeECccccch
Confidence 4778888765 679999999999999999994333333 257999999753
No 50
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=97.62 E-value=4.5e-05 Score=58.17 Aligned_cols=50 Identities=24% Similarity=0.594 Sum_probs=39.7
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCS 211 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~ 211 (217)
.+.+|.+|+...+ ...||.|+.|.+.||..|+++...... ...|+|+.|.
T Consensus 6 ~~~~C~~C~~~g~-~~~ll~C~~C~~~~H~~Cl~~~~~~~~-~~~W~C~~C~ 55 (111)
T 2ysm_A 6 SGANCAVCDSPGD-LLDQFFCTTCGQHYHGMCLDIAVTPLK-RAGWQCPECK 55 (111)
T ss_dssp CCSCBTTTCCCCC-TTTSEECSSSCCEECTTTTTCCCCTTT-STTCCCTTTC
T ss_pred CCCCCcCCCCCCC-CcCCeECCCCCCCcChHHhCCcccccc-ccCccCCcCC
Confidence 4457999998754 457899999999999999998765432 3579999885
No 51
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.21 E-value=8.1e-05 Score=57.25 Aligned_cols=51 Identities=25% Similarity=0.574 Sum_probs=37.8
Q ss_pred CceeCccCCCC-----CCCCceEeccCCCCeeeccccccCccccC--CCCeEEcCCCC
Q 027884 161 ETLCGSCGGNY-----NADEFWIGCDICERWFHGKCVKITPAKAE--NIKQYKCPSCS 211 (217)
Q Consensus 161 ~~~C~iC~~py-----~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~--~~d~y~Cp~C~ 211 (217)
..+|.+|.+.. ...+.+|.|+.|...||..|+++.+.... ....|+|+.|.
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 45788997653 23578999999999999999987643211 13579999995
No 52
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=96.80 E-value=0.00021 Score=55.19 Aligned_cols=50 Identities=26% Similarity=0.582 Sum_probs=36.2
Q ss_pred ceeCccCCCC------CCCCceEeccCCCCeeeccccccCccccC--CCCeEEcCCCC
Q 027884 162 TLCGSCGGNY------NADEFWIGCDICERWFHGKCVKITPAKAE--NIKQYKCPSCS 211 (217)
Q Consensus 162 ~~C~iC~~py------~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~--~~d~y~Cp~C~ 211 (217)
.+|.+|.... ...+.+|.|+.|...||..|+++...... ....|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 4688887644 22578999999999999999998743211 12469888874
No 53
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=96.46 E-value=0.0013 Score=53.29 Aligned_cols=53 Identities=23% Similarity=0.516 Sum_probs=39.4
Q ss_pred cccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCcc-----cc-CCCCeEEcCCCCCc
Q 027884 157 DEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPA-----KA-ENIKQYKCPSCSMK 213 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~-----~a-~~~d~y~Cp~C~~k 213 (217)
++..+.+|.+|+. ++..|.||.|.+-||..|+..... .+ ...+.|.|+.|..+
T Consensus 59 ~Dg~~d~C~vC~~----GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 59 SDGMDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TTSCBCSCSSSCC----CSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCCeecccCC----CCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 3445568999985 567999999999999999983321 11 12468999999865
No 54
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=95.85 E-value=0.003 Score=50.44 Aligned_cols=54 Identities=22% Similarity=0.536 Sum_probs=39.3
Q ss_pred CcccCCceeCccCCCCCCCCceEeccCCCCeeeccccccC--c---ccc-CCCCeEEcCCCCCc
Q 027884 156 EDEHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKIT--P---AKA-ENIKQYKCPSCSMK 213 (217)
Q Consensus 156 dee~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt--~---~~a-~~~d~y~Cp~C~~k 213 (217)
|+|..+.+|.+|+. ++..|.||.|.+-||..|+... + ..+ ...+.|.|..|..+
T Consensus 52 d~Dg~~~~C~vC~d----GG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 52 DSDGMDEQCRWCAE----GGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp CTTSCBSSCTTTCC----CSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCCCcCeecCC----CCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 33445567989984 5689999999999999999742 1 112 12468999999865
No 55
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=94.34 E-value=0.019 Score=38.94 Aligned_cols=49 Identities=27% Similarity=0.472 Sum_probs=32.5
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.....|++|...+..+.. +..-.|+..||..|+.---.. ...||.|+..
T Consensus 12 ~~~~~C~IC~~~~~~~~~-~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~~ 60 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGED-VRRLPCMHLFHQVCVDQWLIT-----NKKCPICRVD 60 (69)
T ss_dssp TCCCSBTTTTBCCCSSSC-EEECTTSCEEEHHHHHHHHHH-----CSBCTTTCSB
T ss_pred CCCCCCeeCCccccCCCc-EEEeCCCCHHHHHHHHHHHHc-----CCCCcCcCcc
Confidence 344569999887753333 333469999999999633221 2359999864
No 56
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=94.27 E-value=0.036 Score=35.77 Aligned_cols=47 Identities=23% Similarity=0.473 Sum_probs=34.6
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
..|++|...+..+...+.-..|+..||..|+.--.. ....||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~-----~~~~CP~Cr~~ 52 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG-----SHSTCPLCRLT 52 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT-----TCCSCSSSCCC
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHHHH-----cCCcCcCCCCE
Confidence 459999998875555666667999999999964322 13569999864
No 57
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=92.49 E-value=0.11 Score=35.79 Aligned_cols=48 Identities=25% Similarity=0.492 Sum_probs=32.1
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+......+. -.|...||..|+.---. ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~-~~C~H~fc~~Ci~~~~~-----~~~~CP~Cr~~ 61 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQ-LPCNHLFHDSCIVPWLE-----QHDSCPVCRKS 61 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEE-CTTSCEEETTTTHHHHT-----TTCSCTTTCCC
T ss_pred CCCCCeeCCccccCCCCEEE-eCCCCeecHHHHHHHHH-----cCCcCcCcCCc
Confidence 34569999988764433222 25889999999963321 12579999864
No 58
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=92.40 E-value=0.065 Score=34.42 Aligned_cols=48 Identities=21% Similarity=0.454 Sum_probs=34.6
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+..|++|...+..++..+..-.|...||..|+.--... ...||.|+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 52 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKE-----GYRCPLCSGP 52 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHH-----TCCCTTSCCS
T ss_pred CCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHc-----CCcCCCCCCc
Confidence 34599999887545555666779999999999643221 1679999864
No 59
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=91.66 E-value=0.075 Score=38.39 Aligned_cols=49 Identities=29% Similarity=0.583 Sum_probs=33.3
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
..+..|++|...+..+...+.- .|...||..|+.---. ....||.|+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l-~C~H~Fh~~Ci~~wl~-----~~~~CP~Cr~~ 86 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATEL-PCHHYFHKPCVSIWLQ-----KSGTCPVCRCM 86 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEE-TTTEEEEHHHHHHHHT-----TTCBCTTTCCB
T ss_pred CCCCCCcccChhhcCCCcEEec-CCCChHHHHHHHHHHH-----cCCcCcCcCcc
Confidence 3456799999877644444333 4999999999864221 13479999864
No 60
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.28 E-value=0.081 Score=36.46 Aligned_cols=48 Identities=27% Similarity=0.570 Sum_probs=32.8
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.+..|++|...+..+ ..+..-.|..-||..|+.---.. ...||.|+..
T Consensus 22 ~~~~C~IC~~~~~~~-~~~~~l~C~H~fh~~Ci~~w~~~-----~~~CP~Cr~~ 69 (75)
T 1x4j_A 22 EQTLCVVCMCDFESR-QLLRVLPCNHEFHAKCVDKWLKA-----NRTCPICRAD 69 (75)
T ss_dssp SCCEETTTTEECCBT-CEEEEETTTEEEETTHHHHHHHH-----CSSCTTTCCC
T ss_pred CCCCCeECCcccCCC-CeEEEECCCCHhHHHHHHHHHHc-----CCcCcCcCCc
Confidence 345699999887633 34444469999999999643221 2469999864
No 61
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.79 E-value=0.16 Score=34.67 Aligned_cols=47 Identities=28% Similarity=0.603 Sum_probs=32.0
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+..|++|...+......+.. .|...||..|+.---.. ...||.|+..
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~-~C~H~f~~~Ci~~~~~~-----~~~CP~Cr~~ 61 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGIC-PCKHAFHRKCLIKWLEV-----RKVCPLCNMP 61 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEE-TTTEEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCCcCCCcccCCCCcEEEc-CCCCEecHHHHHHHHHc-----CCcCCCcCcc
Confidence 34699999988644444433 58999999999643221 1379999864
No 62
>2e61_A Zinc finger CW-type PWWP domain protein 1; ZF-CW domain, structural genomics, NPPSFA, national project protein structural and functional analyses; NMR {Homo sapiens} PDB: 2rr4_A*
Probab=90.10 E-value=0.23 Score=35.47 Aligned_cols=33 Identities=21% Similarity=0.571 Sum_probs=21.2
Q ss_pred CCceEecc--CCCCeeeccccccCccccCCCCeEEcCC
Q 027884 174 DEFWIGCD--ICERWFHGKCVKITPAKAENIKQYKCPS 209 (217)
Q Consensus 174 d~~mIqCD--~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~ 209 (217)
...||||| .|.+|=-.. .++... ...+.|+|..
T Consensus 15 ~~~WVQCd~p~C~KWR~LP-~~~~~~--~lpd~W~C~m 49 (69)
T 2e61_A 15 CLVWVQCSFPNCGKWRRLC-GNIDPS--VLPDNWSCDQ 49 (69)
T ss_dssp CCCEEECSSTTTCCEEECC-SSCCTT--TSCTTCCGGG
T ss_pred CCeEEEeCccccCcccCCc-cccccc--cCCCcCEeCC
Confidence 46899999 999995441 122221 2356899963
No 63
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=89.78 E-value=0.13 Score=38.03 Aligned_cols=50 Identities=20% Similarity=0.347 Sum_probs=31.7
Q ss_pred eeCccCCCCCCCC--------------ceEeccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 027884 163 LCGSCGGNYNADE--------------FWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 163 ~C~iC~~py~~d~--------------~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
.|++|...+.... ..+.--.|...||..|+.---..........||.|+.
T Consensus 27 ~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~ 90 (114)
T 1v87_A 27 DCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKT 90 (114)
T ss_dssp EETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCC
T ss_pred cCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCC
Confidence 6999987764221 2333557999999999963221111123578999985
No 64
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.62 E-value=0.24 Score=35.66 Aligned_cols=49 Identities=16% Similarity=0.395 Sum_probs=32.2
Q ss_pred ceeCccCCCCCCCCceEe---ccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 162 TLCGSCGGNYNADEFWIG---CDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIq---CD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
..|.+|...++.++.+|. |.+...+||..|+.-=-... ....||.|+..
T Consensus 16 ~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~---~~~~CplCr~~ 67 (80)
T 2d8s_A 16 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSS---DTRCCELCKYE 67 (80)
T ss_dssp CCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHH---CCSBCSSSCCB
T ss_pred CCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhC---CCCCCCCCCCe
Confidence 359999988765666763 22334999999996321111 23679999853
No 65
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.06 E-value=0.31 Score=33.90 Aligned_cols=47 Identities=17% Similarity=0.376 Sum_probs=32.5
Q ss_pred ccCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 158 EHSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 158 e~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
......|++|...+. + . +. -.|...||..|+.--... ...||.|+..
T Consensus 12 ~~~~~~C~IC~~~~~-~-p-~~-~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 58 (81)
T 2csy_A 12 EEIPFRCFICRQAFQ-N-P-VV-TKCRHYFCESCALEHFRA-----TPRCYICDQP 58 (81)
T ss_dssp CCCCSBCSSSCSBCC-S-E-EE-CTTSCEEEHHHHHHHHHH-----CSBCSSSCCB
T ss_pred CCCCCCCcCCCchhc-C-e-eE-ccCCCHhHHHHHHHHHHC-----CCcCCCcCcc
Confidence 344567999998875 2 2 22 479999999999643221 3579999864
No 66
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=87.58 E-value=0.21 Score=37.51 Aligned_cols=50 Identities=24% Similarity=0.604 Sum_probs=36.1
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccC---c--------cccCCCCeEEcCCCCC
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKIT---P--------AKAENIKQYKCPSCSM 212 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt---~--------~~a~~~d~y~Cp~C~~ 212 (217)
+..|.+|..-. .+.++.|..|.+-||..|..-. . .+|....-|.|+.|..
T Consensus 15 D~~C~VC~~~t--~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 15 DEMCDVCEVWT--AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp SCCCTTTCCCC--SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CcccCcccccc--ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 34699998643 5689999999999999998521 1 1222335799999965
No 67
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.31 E-value=0.45 Score=33.07 Aligned_cols=51 Identities=20% Similarity=0.390 Sum_probs=34.3
Q ss_pred CCceeCccCCCCCCCCc-eEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEF-WIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~-mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+..+.. .+.- .|+..||..|+.---... .....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~-~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLL-HCGHTICRQCLEKLLASS--INGVRCPFCSKI 65 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEEC-SSSCEEEHHHHHHHHHHC--SSCBCCTTTCCC
T ss_pred CCCCCccCCccccccCCCeEEC-CCCChhhHHHHHHHHHcC--CCCcCCCCCCCc
Confidence 34569999998874332 3333 699999999997432211 135789999874
No 68
>2l7p_A Histone-lysine N-methyltransferase ASHH2; CW-domain; NMR {Arabidopsis thaliana}
Probab=87.28 E-value=0.29 Score=37.50 Aligned_cols=36 Identities=17% Similarity=0.602 Sum_probs=23.6
Q ss_pred CCCCceEeccCCCCeeeccccccCccccCCCCeEEcCC
Q 027884 172 NADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPS 209 (217)
Q Consensus 172 ~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~ 209 (217)
.....|||||.|.+|=-.. .++... ....+.|+|..
T Consensus 23 ~~~~~WVQCD~C~KWRrLP-~~~~~~-~~~pd~W~C~m 58 (100)
T 2l7p_A 23 STESAWVRCDDCFKWRRIP-ASVVGS-IDESSRWICMN 58 (100)
T ss_dssp SSSSEEEECTTTCCEEEEC-HHHHTT-STTSSCCCGGG
T ss_pred CCCCeEEeeCCCCccccCC-hhHccc-cCCCCCceeCC
Confidence 3367999999999996654 222211 12357899965
No 69
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.67 E-value=0.69 Score=31.34 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=30.6
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+. + .+.- .|...||..|+.--.. ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~-~--~~~~-~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~~ 58 (71)
T 2d8t_A 14 TVPECAICLQTCV-H--PVSL-PCKHVFCYLCVKGASW-----LGKRCALCRQE 58 (71)
T ss_dssp SCCBCSSSSSBCS-S--EEEE-TTTEEEEHHHHHHCTT-----CSSBCSSSCCB
T ss_pred CCCCCccCCcccC-C--CEEc-cCCCHHHHHHHHHHHH-----CCCcCcCcCch
Confidence 3456999998765 2 2332 5898999999964322 13679999864
No 70
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=83.35 E-value=0.88 Score=31.20 Aligned_cols=49 Identities=18% Similarity=0.472 Sum_probs=33.4
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
....|++|...+. .-+.-..|...||..|+.---... ....||.|+..-
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~~---~~~~CP~Cr~~~ 62 (74)
T 2yur_A 14 DELLCLICKDIMT---DAVVIPCCGNSYCDECIRTALLES---DEHTCPTCHQND 62 (74)
T ss_dssp GGGSCSSSCCCCT---TCEECSSSCCEECTTHHHHHHHHS---SSSCCSSSCCSS
T ss_pred CCCCCcCCChHHh---CCeEcCCCCCHHHHHHHHHHHHhc---CCCcCCCCCCcC
Confidence 4567999988775 233444599999999996433211 246899999753
No 71
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=83.10 E-value=0.68 Score=34.05 Aligned_cols=33 Identities=24% Similarity=0.387 Sum_probs=26.6
Q ss_pred cCCceeCccCCCCCCCCceEecc--CCCCeeeccccc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVK 193 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVg 193 (217)
.+...|.+|++.. .+--|||. .|...||..|..
T Consensus 15 R~~l~C~iC~~~~--~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 15 RWKLTCYLCKQKG--VGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCBTTTTBCC--SSCEEECSCTTTCCEEEHHHHH
T ss_pred HhcCCCcCCCCCC--CcEeEecCCCCCCCcCcHHHHH
Confidence 5677899998642 35789998 599999999963
No 72
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.60 E-value=2.6 Score=28.15 Aligned_cols=49 Identities=22% Similarity=0.449 Sum_probs=33.0
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
....|++|...+. + .+.- .|+.-||..|+.--... ......||.|+..-
T Consensus 19 ~~~~C~IC~~~~~-~--~~~~-~CgH~fC~~Ci~~~~~~--~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 19 EEVICPICLDILQ-K--PVTI-DCGHNFCLKCITQIGET--SCGFFKCPLCKTSV 67 (73)
T ss_dssp CCCBCTTTCSBCS-S--EEEC-TTCCEEEHHHHHHHCSS--SCSCCCCSSSCCCC
T ss_pred cCCEeccCCcccC-C--eEEc-CCCChhhHHHHHHHHHc--CCCCCCCCCCCCcC
Confidence 3457999998775 2 2222 89999999999743221 12357899998753
No 73
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=80.59 E-value=0.7 Score=30.27 Aligned_cols=43 Identities=16% Similarity=0.448 Sum_probs=29.4
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.....|++|...+.. -..+ .|..-|+..|+.- ....||.|+..
T Consensus 4 ~~~~~C~IC~~~~~~-p~~l---~CgH~fC~~Ci~~--------~~~~CP~Cr~~ 46 (56)
T 1bor_A 4 FQFLRCQQCQAEAKC-PKLL---PCLHTLCSGCLEA--------SGMQCPICQAP 46 (56)
T ss_dssp CCCSSCSSSCSSCBC-CSCS---TTSCCSBTTTCSS--------SSSSCSSCCSS
T ss_pred ccCCCceEeCCccCC-eEEc---CCCCcccHHHHcc--------CCCCCCcCCcE
Confidence 344669999988763 2222 4777888889754 23579999864
No 74
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=80.58 E-value=1.3 Score=30.02 Aligned_cols=50 Identities=16% Similarity=0.424 Sum_probs=32.4
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccc--cCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAK--AENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~--a~~~d~y~Cp~C~~k 213 (217)
....|++|...+.. -..+ .|+.-||..|+.---.. ........||.|+..
T Consensus 11 ~~~~C~IC~~~~~~-p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~ 62 (79)
T 2egp_A 11 EEVTCPICLELLTE-PLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGIS 62 (79)
T ss_dssp CCCEETTTTEECSS-CCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCC
T ss_pred cCCCCcCCCcccCC-eeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCc
Confidence 34679999987752 2222 68889999998632221 111236789999864
No 75
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.25 E-value=0.44 Score=33.65 Aligned_cols=45 Identities=20% Similarity=0.557 Sum_probs=28.4
Q ss_pred eCccCCCCC-----------CCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 164 CGSCGGNYN-----------ADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 164 C~iC~~py~-----------~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
|++|...+. .++..+.--.|..-||..|+.-=-. ..-.||.|+..
T Consensus 18 C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-----~~~~CP~CR~~ 73 (81)
T 2ecl_A 18 CAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVK-----QNNRCPLCQQD 73 (81)
T ss_dssp BTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTT-----TCCBCTTTCCB
T ss_pred CcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHH-----hCCCCCCcCCC
Confidence 666666553 2333444447999999999873221 12379999864
No 76
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=76.44 E-value=3.6 Score=38.09 Aligned_cols=55 Identities=22% Similarity=0.403 Sum_probs=36.4
Q ss_pred cCCceeCccCCCCCCCCc--eEecc--CCCCeeecccccc------CccccCCCCeEEcCCCCCc
Q 027884 159 HSETLCGSCGGNYNADEF--WIGCD--ICERWFHGKCVKI------TPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~--mIqCD--~Ce~WfH~~CVgI------t~~~a~~~d~y~Cp~C~~k 213 (217)
....-|++|-....+++. -..|+ .|+.=||..|+-- +....-..-.--||.|+.+
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 455679999876554233 25698 9999999999931 1112223346789999864
No 77
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.69 E-value=2 Score=27.31 Aligned_cols=45 Identities=22% Similarity=0.494 Sum_probs=29.3
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSC 210 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C 210 (217)
....|++|...+... ..+ .|..-||..|+.---... .....||.|
T Consensus 14 ~~~~C~IC~~~~~~p-~~~---~CgH~fC~~Ci~~~~~~~--~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEP-VII---ECGHNFCKACITRWWEDL--ERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSC-CCC---SSCCCCCHHHHHHHTTSS--CCSCCCSCC
T ss_pred cCCCCccCCcccCcc-EeC---CCCCccCHHHHHHHHHhc--CCCCCCCCC
Confidence 345699999887632 222 688899999996432211 135678887
No 78
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.29 E-value=1.5 Score=29.76 Aligned_cols=46 Identities=22% Similarity=0.444 Sum_probs=32.1
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+.+ -+.-..|..-||..|+.---.. ...||.|+..
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~-----~~~CP~Cr~~ 59 (72)
T 2djb_A 14 PYILCSICKGYLID---ATTITECLHTFCKSCIVRHFYY-----SNRCPKCNIV 59 (72)
T ss_dssp GGGSCTTTSSCCSS---CEECSSSCCEECHHHHHHHHHH-----CSSCTTTCCC
T ss_pred CCCCCCCCChHHHC---cCEECCCCCHHHHHHHHHHHHc-----CCcCCCcCcc
Confidence 34679999887752 3444578999999998643221 3579999864
No 79
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.24 E-value=2.2 Score=27.89 Aligned_cols=45 Identities=24% Similarity=0.476 Sum_probs=29.5
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSC 210 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C 210 (217)
.+..|++|...+. + ..+ - .|+..||..|+.---.. ......||.|
T Consensus 19 ~~~~C~IC~~~~~-~-p~~-~-~CgH~fC~~Ci~~~~~~--~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQ-K-PVT-I-DCGHNFCLKCITQIGET--SCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCS-S-CEE-C-TTSSEECHHHHHHHHHH--CSSCCCCSCC
T ss_pred cCCCCCcCCchhC-C-eEE-e-CCCCcchHHHHHHHHHc--CCCCCcCcCC
Confidence 3456999998775 2 222 2 79999999999633221 1134678887
No 80
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=74.02 E-value=1.1 Score=32.58 Aligned_cols=47 Identities=17% Similarity=0.349 Sum_probs=35.0
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+. .-+.|-.|+.-||..|+.---.. ....||.|+..
T Consensus 21 ~~~~C~IC~~~~~---~p~~~~~CgH~FC~~Ci~~~~~~----~~~~CP~Cr~~ 67 (100)
T 3lrq_A 21 EVFRCFICMEKLR---DARLCPHCSKLCCFSCIRRWLTE----QRAQCPHCRAP 67 (100)
T ss_dssp HHTBCTTTCSBCS---SEEECTTTCCEEEHHHHHHHHHH----TCSBCTTTCCB
T ss_pred CCCCCccCCcccc---CccccCCCCChhhHHHHHHHHHH----CcCCCCCCCCc
Confidence 4457999998875 46788899999999999643221 12689999864
No 81
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.99 E-value=1.1 Score=30.54 Aligned_cols=49 Identities=20% Similarity=0.448 Sum_probs=31.5
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccc-cCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAK-AENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~-a~~~d~y~Cp~C~~k 213 (217)
...|++|...+.. -..+ .|...||..|+..--.. ........||.|+..
T Consensus 19 ~~~C~IC~~~~~~-p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecv_A 19 EVTCPICLELLTQ-PLSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRIS 68 (85)
T ss_dssp CCCCTTTCSCCSS-CBCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCS
T ss_pred CCCCCCCCcccCC-ceeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCc
Confidence 4569999988752 2222 68889999999642211 001135789999864
No 82
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.95 E-value=0.89 Score=29.95 Aligned_cols=49 Identities=22% Similarity=0.481 Sum_probs=32.6
Q ss_pred CceeCccCCCCCCC---CceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 161 ETLCGSCGGNYNAD---EFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 161 ~~~C~iC~~py~~d---~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
...|++|...+... ...+.--.|..-||..|+.--... ...||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~~ 66 (69)
T 2ea6_A 15 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKKI 66 (69)
T ss_dssp CCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH-----CSSCTTTCCCC
T ss_pred CCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc-----CCCCCCCCCcc
Confidence 45699999876431 233444578999999999643221 24699998653
No 83
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=72.43 E-value=1.8 Score=32.59 Aligned_cols=46 Identities=20% Similarity=0.389 Sum_probs=30.0
Q ss_pred eeCccCCCCCCC--------------CceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 163 LCGSCGGNYNAD--------------EFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 163 ~C~iC~~py~~d--------------~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.|++|...+... +-.+.--.|..-||..|+.-=-. ....||.|+..
T Consensus 39 ~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~-----~~~~CP~Cr~~ 98 (106)
T 3dpl_R 39 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-----TRQVCPLDNRE 98 (106)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT-----TCSBCSSSCSB
T ss_pred CCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHH-----cCCcCcCCCCc
Confidence 488998776521 11233347999999999863211 13579999874
No 84
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=71.35 E-value=2.5 Score=28.71 Aligned_cols=49 Identities=18% Similarity=0.403 Sum_probs=31.7
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCcccc-CCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKA-ENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a-~~~d~y~Cp~C~~k 213 (217)
...|++|...+.. .. .. .|..-||..|+.---... .......||.|+..
T Consensus 19 ~~~C~IC~~~~~~--p~-~~-~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~ 68 (85)
T 2ecw_A 19 EVTCPICLELLKE--PV-SA-DCNHSFCRACITLNYESNRNTDGKGNCPVCRVP 68 (85)
T ss_dssp TTSCTTTCSCCSS--CE-EC-TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCC
T ss_pred CCCCcCCChhhCc--ce-eC-CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCc
Confidence 4569999988752 22 22 588899999986322111 11236889999864
No 85
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=71.14 E-value=1.6 Score=34.30 Aligned_cols=47 Identities=23% Similarity=0.496 Sum_probs=34.3
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+. .-+.+-.|+..||..|+.---.. ....||.|+..
T Consensus 53 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 99 (165)
T 2ckl_B 53 SELMCPICLDMLK---NTMTTKECLHRFCADCIITALRS----GNKECPTCRKK 99 (165)
T ss_dssp HHHBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHHT----TCCBCTTTCCB
T ss_pred CCCCCcccChHhh---CcCEeCCCCChhHHHHHHHHHHh----CcCCCCCCCCc
Confidence 4567999988775 34566689999999999643221 24779999864
No 86
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.61 E-value=1.6 Score=28.90 Aligned_cols=46 Identities=17% Similarity=0.344 Sum_probs=31.6
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+.. -.. -.|+.-||..|+.---. .....||.|+..
T Consensus 14 ~~~~C~IC~~~~~~-p~~---~~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~~ 59 (66)
T 2ecy_A 14 DKYKCEKCHLVLCS-PKQ---TECGHRFCESCMAALLS----SSSPKCTACQES 59 (66)
T ss_dssp CCEECTTTCCEESS-CCC---CSSSCCCCHHHHHHHHT----TSSCCCTTTCCC
T ss_pred cCCCCCCCChHhcC-eeE---CCCCCHHHHHHHHHHHH----hCcCCCCCCCcC
Confidence 34679999987752 222 27888999999974322 124679999875
No 87
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=69.21 E-value=1.8 Score=30.65 Aligned_cols=48 Identities=19% Similarity=0.399 Sum_probs=31.8
Q ss_pred CceeCccCCCCCC-CCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+..|++|-.+... +.....| .|+.-|+..|....-.. ..+.||.|++.
T Consensus 11 ~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~~----~~~~CP~CR~~ 59 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRTD----ENGLCPACRKP 59 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTTS----SCSBCTTTCCB
T ss_pred CCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHhc----CCCCCCCCCCc
Confidence 4569999998752 2222234 58888999998633221 35899999974
No 88
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=66.73 E-value=0.75 Score=30.67 Aligned_cols=48 Identities=23% Similarity=0.549 Sum_probs=32.5
Q ss_pred CceeCccCCCCCC---CCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNA---DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~---d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+..|++|...+.. ++..+.--.|+.-||..|+.---.. ...||.|+..
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 60 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKK 60 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHc-----CCCCCCCCCc
Confidence 4569999987642 2344455689999999999632221 2479999864
No 89
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=66.69 E-value=1.1 Score=29.14 Aligned_cols=48 Identities=23% Similarity=0.536 Sum_probs=32.1
Q ss_pred CceeCccCCCCCC---CCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNA---DEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~---d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+..|++|...+.. ....+.--.|+.-||..|+.--... ...||.|+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~-----~~~CP~Cr~~ 53 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN-----ANTCPTCRKK 53 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc-----CCCCCCCCcc
Confidence 3469999987642 2233444588999999999643221 2479999864
No 90
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=65.75 E-value=2.4 Score=29.75 Aligned_cols=49 Identities=20% Similarity=0.510 Sum_probs=32.6
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.....|++|...+. + -+.-..|+.-|+..|+.-.-.. ...+.||.|+..
T Consensus 11 ~~~~~C~IC~~~~~-~--p~~~~~CgH~fC~~Ci~~~~~~---~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 11 PDELLCLICKDIMT-D--AVVIPCCGNSYCDECIRTALLE---SDEHTCPTCHQN 59 (92)
T ss_dssp CTTTEETTTTEECS-S--CEECTTTCCEECHHHHHHHHHH---CTTCCCTTTCCS
T ss_pred CcCCCCCCCChhhc-C--ceECCCCCCHHHHHHHHHHHHh---cCCCcCcCCCCc
Confidence 45578999998775 2 2333348999999998633211 124789999875
No 91
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=64.57 E-value=2.7 Score=30.62 Aligned_cols=46 Identities=22% Similarity=0.451 Sum_probs=32.9
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+. .-+....|+.-||..|+.---. ....||.|+..
T Consensus 14 ~~~~C~IC~~~~~---~p~~~~~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~~ 59 (108)
T 2ckl_A 14 PHLMCVLCGGYFI---DATTIIECLHSFCKTCIVRYLE-----TSKYCPICDVQ 59 (108)
T ss_dssp GGTBCTTTSSBCS---SEEEETTTCCEEEHHHHHHHHT-----SCSBCTTTCCB
T ss_pred CcCCCccCChHHh---CcCEeCCCCChhhHHHHHHHHH-----hCCcCcCCCcc
Confidence 3456999988775 3455568999999999964322 12679999864
No 92
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=63.51 E-value=3.1 Score=34.17 Aligned_cols=55 Identities=27% Similarity=0.603 Sum_probs=40.1
Q ss_pred CcccCCceeCccCCCCCCCCceEecc--CCCCeeecccccc--Cc---cccCCCCeEEcCCCCCcC
Q 027884 156 EDEHSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKI--TP---AKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 156 dee~~~~~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgI--t~---~~a~~~d~y~Cp~C~~kr 214 (217)
|+|.-+.+|-+|+. ++..|.|| .|.+=|=..|+.. .+ ..+...+.|.|-.|..+.
T Consensus 74 DeDG~~~yC~wC~~----Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 74 DDDGYQSYCTICCG----GREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp CTTSSBSSCTTTSC----CSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCCCcceeeEecC----CCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 44445668988984 66899999 8999999999863 22 112235789999998754
No 93
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=63.30 E-value=4.1 Score=27.65 Aligned_cols=46 Identities=9% Similarity=0.014 Sum_probs=32.1
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|..... ...+. .|+.-|+..|+.---. .....||.|+..
T Consensus 7 ~~~~C~IC~~~~~--~Pv~~--~CgH~fc~~Ci~~~~~----~~~~~CP~C~~~ 52 (78)
T 1t1h_A 7 EYFRCPISLELMK--DPVIV--STGQTYERSSIQKWLD----AGHKTCPKSQET 52 (78)
T ss_dssp SSSSCTTTSCCCS--SEEEE--TTTEEEEHHHHHHHHT----TTCCBCTTTCCB
T ss_pred ccCCCCCcccccc--CCEEc--CCCCeecHHHHHHHHH----HCcCCCCCCcCC
Confidence 4567999998875 23332 6999999999864322 125789999864
No 94
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=62.92 E-value=3.5 Score=29.43 Aligned_cols=46 Identities=20% Similarity=0.500 Sum_probs=32.4
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+.+ -+..-.|+.-||..|+.---. ....||.|+..
T Consensus 21 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~-----~~~~CP~Cr~~ 66 (99)
T 2y43_A 21 DLLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLS-----YKTQCPTCCVT 66 (99)
T ss_dssp HHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHT-----TCCBCTTTCCB
T ss_pred CCCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHH-----CCCCCCCCCCc
Confidence 34579999988752 344457999999999864322 23689999864
No 95
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=62.20 E-value=2.1 Score=28.33 Aligned_cols=44 Identities=18% Similarity=0.339 Sum_probs=29.4
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
..|++|...+.. -+..-.|+.-||..|+.--... ...||.|+..
T Consensus 6 ~~C~IC~~~~~~---~~~~~~C~H~fc~~Ci~~~~~~-----~~~CP~Cr~~ 49 (68)
T 1chc_A 6 ERCPICLEDPSN---YSMALPCLHAFCYVCITRWIRQ-----NPTCPLCKVP 49 (68)
T ss_dssp CCCSSCCSCCCS---CEEETTTTEEESTTHHHHHHHH-----SCSTTTTCCC
T ss_pred CCCeeCCccccC---CcEecCCCCeeHHHHHHHHHhC-----cCcCcCCChh
Confidence 459999987652 1233468888999999642221 2479999864
No 96
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=61.12 E-value=5.4 Score=29.13 Aligned_cols=37 Identities=24% Similarity=0.467 Sum_probs=29.8
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeeccccccCccccC
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAE 200 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~ 200 (217)
..|-+|++.. .++.-.|..|+.-+|..|+...+....
T Consensus 48 ~~C~~C~~~~--~~~~Y~C~~C~f~lH~~Ca~~p~~~~~ 84 (89)
T 1v5n_A 48 YTCDKCEEEG--TIWSYHCDECDFDLHAKCALNEDTKES 84 (89)
T ss_dssp CCCTTTSCCC--CSCEEECTTTCCCCCHHHHHCSSCSSC
T ss_pred eEeCCCCCcC--CCcEEEcCCCCCeEcHHhcCCCCcccc
Confidence 4698999864 567788999999999999987765443
No 97
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=60.28 E-value=2.2 Score=32.93 Aligned_cols=46 Identities=20% Similarity=0.389 Sum_probs=0.0
Q ss_pred eeCccCCCCCCC--------------CceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 163 LCGSCGGNYNAD--------------EFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 163 ~C~iC~~py~~d--------------~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.|.+|...+... +..|.--.|..-||..|+.-=-. ..-.||.|+..
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~-----~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK-----TRQVCPLDNRE 109 (117)
T ss_dssp -----------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHH-----cCCcCCCCCCe
Confidence 599998776421 11122236899999999854221 24579999864
No 98
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=59.92 E-value=2.4 Score=39.23 Aligned_cols=60 Identities=20% Similarity=0.429 Sum_probs=42.3
Q ss_pred CCCCCCcccCCceeCccCCCCCCCCceEecc--CCCCeeeccccccCc--c---ccCCCCeEEcCCCCCcC
Q 027884 151 SFDDEEDEHSETLCGSCGGNYNADEFWIGCD--ICERWFHGKCVKITP--A---KAENIKQYKCPSCSMKR 214 (217)
Q Consensus 151 ~~eeedee~~~~~C~iC~~py~~d~~mIqCD--~Ce~WfH~~CVgIt~--~---~a~~~d~y~Cp~C~~kr 214 (217)
+.-.-|+|..+.+|-.|+. ++..+.|| .|.+=|=..|+...- . ++...+.|.|-.|..+.
T Consensus 83 ~~f~~D~DG~~~yCr~C~~----Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 83 ALFLYDDDGYQSYCSICCS----GETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp TTTCBCSSSSBCSCTTTCC----CSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred cCcccCCCCCcccceEcCC----CCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 3333345556678988985 56899999 999999999986422 1 11224789999998753
No 99
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=59.30 E-value=3.2 Score=31.77 Aligned_cols=43 Identities=19% Similarity=0.506 Sum_probs=29.2
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
..|++|...+. +-.++ .|+..||..|+.---. ....||.|+..
T Consensus 54 ~~C~iC~~~~~-~~~~~---~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~~ 96 (138)
T 4ayc_A 54 LQCIICSEYFI-EAVTL---NCAHSFCSYCINEWMK-----RKIECPICRKD 96 (138)
T ss_dssp SBCTTTCSBCS-SEEEE---TTSCEEEHHHHHHHTT-----TCSBCTTTCCB
T ss_pred CCCcccCcccC-CceEC---CCCCCccHHHHHHHHH-----cCCcCCCCCCc
Confidence 46999998875 22222 5888999999863211 23569999853
No 100
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.64 E-value=2.1 Score=28.50 Aligned_cols=42 Identities=24% Similarity=0.546 Sum_probs=29.4
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
...|++|...+.. .. -.|..-||..|+.--.. ....||.|+.
T Consensus 15 ~~~C~IC~~~~~~--~~---~~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~ 56 (70)
T 2ecn_A 15 EEECCICMDGRAD--LI---LPCAHSFCQKCIDKWSD-----RHRNCPICRL 56 (70)
T ss_dssp CCCCSSSCCSCCS--EE---ETTTEEECHHHHHHSSC-----CCSSCHHHHH
T ss_pred CCCCeeCCcCccC--cc---cCCCCcccHHHHHHHHH-----CcCcCCCcCC
Confidence 4569999988763 22 35888899999964322 2467999875
No 101
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=55.69 E-value=4.1 Score=29.87 Aligned_cols=46 Identities=24% Similarity=0.399 Sum_probs=31.7
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.+..|++|...+. + ..+- .|+.-||..|+.---. .....||.|+..
T Consensus 14 ~~~~C~iC~~~~~-~-p~~~--~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~~ 59 (115)
T 3l11_A 14 SECQCGICMEILV-E-PVTL--PCNHTLCKPCFQSTVE----KASLCCPFCRRR 59 (115)
T ss_dssp HHHBCTTTCSBCS-S-CEEC--TTSCEECHHHHCCCCC----TTTSBCTTTCCB
T ss_pred CCCCCccCCcccC-c-eeEc--CCCCHHhHHHHHHHHh----HCcCCCCCCCcc
Confidence 3467999998775 2 2222 6898999999864332 134789999864
No 102
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=55.33 E-value=3.9 Score=29.52 Aligned_cols=47 Identities=17% Similarity=0.296 Sum_probs=31.1
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
...|++|...+... ..+ .|+..||..|+.---... .....||.|+..
T Consensus 21 ~~~C~IC~~~~~~p-~~~---~CgH~fC~~Ci~~~~~~~--~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 21 ILECPICLELIKEP-VST---KCDHIFCKFCMLKLLNQK--KGPSQCPLCKND 67 (112)
T ss_dssp HTSCSSSCCCCSSC-CBC---TTSCCCCSHHHHHHHHSS--SSSCCCTTTSCC
T ss_pred CCCCcccChhhcCe-EEC---CCCCHHHHHHHHHHHHhC--CCCCCCcCCCCc
Confidence 45699999877522 222 689999999986332211 134789999864
No 103
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=54.93 E-value=5 Score=28.18 Aligned_cols=54 Identities=20% Similarity=0.476 Sum_probs=40.4
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
....|.+|.+..-.++-=-.|-.|+.=|-..|-|-.+-+.. ...|.|..|+++.
T Consensus 8 d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~-k~~WvC~lC~k~q 61 (62)
T 2a20_A 8 DAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSN-KVMWVCNLCRKQQ 61 (62)
T ss_dssp CCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTT-CEEEEEHHHHHHT
T ss_pred CcchhhhhccceeccCCCccccccCCeeecccCCEeeecCC-eEEEEehhhhhcc
Confidence 34579999998766777778999999999999875443222 2479999998653
No 104
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=52.50 E-value=11 Score=29.78 Aligned_cols=24 Identities=21% Similarity=0.284 Sum_probs=17.3
Q ss_pred cchHHHHHHHHhhccc---Chhhhhhh
Q 027884 74 TDSWLLSVAFYLGARL---NRNERKRL 97 (217)
Q Consensus 74 ~d~wl~~~a~~~~~~~---~~~~r~rL 97 (217)
.|+||+++|.-+++.+ |.+-|+..
T Consensus 85 ~D~~lIaLA~~l~~~lvT~D~~l~~vA 111 (165)
T 2lcq_A 85 ADIEVLALAYELKGEIFSDDYNVQNIA 111 (165)
T ss_dssp HHHHHHHHHHHHTCCEECCCHHHHHHH
T ss_pred HHHHHHHhHHHhCCeEEcCcHHHHHHH
Confidence 4799999999888765 54444443
No 105
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=52.38 E-value=3.5 Score=30.77 Aligned_cols=46 Identities=17% Similarity=0.421 Sum_probs=31.4
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
...|++|...+. + . +.- .|+.-||..|+.---. ...+.||.|+..-
T Consensus 52 ~~~C~IC~~~~~-~-p-~~~-~CgH~fC~~Ci~~~~~----~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 52 TFQCICCQELVF-R-P-ITT-VCQHNVCKDCLDRSFR----AQVFSCPACRYDL 97 (124)
T ss_dssp HTBCTTTSSBCS-S-E-EEC-TTSCEEEHHHHHHHHH----TTCCBCTTTCCBC
T ss_pred CCCCCcCChHHc-C-c-EEe-eCCCcccHHHHHHHHh----HCcCCCCCCCccC
Confidence 356999998775 2 2 222 7899999999863322 1357899998643
No 106
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=52.33 E-value=6.3 Score=33.60 Aligned_cols=46 Identities=22% Similarity=0.479 Sum_probs=34.0
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCC
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
...|.+|...-.. =+.|..|+.=||..|+.---.. ...-.||.|..
T Consensus 180 i~~C~iC~~iv~~---g~~C~~C~~~~H~~C~~~~~~~---~~~~~CP~C~~ 225 (238)
T 3nw0_A 180 VKICNICHSLLIQ---GQSCETCGIRMHLPCVAKYFQS---NAEPRCPHCND 225 (238)
T ss_dssp CCBCTTTCSBCSS---CEECSSSCCEECHHHHHHHTTT---CSSCBCTTTCC
T ss_pred CCcCcchhhHHhC---CcccCccChHHHHHHHHHHHHh---CCCCCCCCCCC
Confidence 5679999987653 3899999999999999642211 13467999975
No 107
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=48.48 E-value=4.6 Score=27.23 Aligned_cols=50 Identities=16% Similarity=0.369 Sum_probs=28.7
Q ss_pred CCceeCccCCCCCCCCceEec--cCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGC--DICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqC--D~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|-+|....+ +....-| .+.-.+||..|+.-=-... ....|+.|...
T Consensus 5 ~~~~CrIC~~~~~-~~l~~PC~C~gs~~~~H~~Cl~~W~~~~---~~~~C~~C~~~ 56 (60)
T 1vyx_A 5 DVPVCWICNEELG-NERFRACGCTGELENVHRSCLSTWLTIS---RNTACQICGVV 56 (60)
T ss_dssp SCCEETTTTEECS-CCCCCSCCCSSGGGSCCHHHHHHHHHHH---TCSBCTTTCCB
T ss_pred CCCEeEEeecCCC-CceecCcCCCCchhhhHHHHHHHHHHhC---CCCccCCCCCe
Confidence 3446989976543 2222233 3334599999996221110 23679999864
No 108
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.70 E-value=14 Score=26.11 Aligned_cols=46 Identities=22% Similarity=0.496 Sum_probs=32.1
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
..|.+|...... -+.|..|..=||..|+.---... ..=.||.|+..
T Consensus 16 ~~C~IC~~~i~~---g~~C~~C~h~fH~~Ci~kWl~~~---~~~~CP~Cr~~ 61 (74)
T 2ct0_A 16 KICNICHSLLIQ---GQSCETCGIRMHLPCVAKYFQSN---AEPRCPHCNDY 61 (74)
T ss_dssp CBCSSSCCBCSS---SEECSSSCCEECHHHHHHHSTTC---SSCCCTTTCSC
T ss_pred CcCcchhhHccc---CCccCCCCchhhHHHHHHHHHhc---CCCCCCCCcCc
Confidence 359999988753 36899999999999997321110 11359999853
No 109
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=41.54 E-value=8.8 Score=34.17 Aligned_cols=30 Identities=30% Similarity=0.699 Sum_probs=19.9
Q ss_pred CCceeCccCCCC----------CCCCceEeccCCCCeeec
Q 027884 160 SETLCGSCGGNY----------NADEFWIGCDICERWFHG 189 (217)
Q Consensus 160 ~~~~C~iC~~py----------~~d~~mIqCD~Ce~WfH~ 189 (217)
...+|++||... ..+..+..|..|+.-.|.
T Consensus 181 ~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~ 220 (309)
T 2fiy_A 181 SRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHY 220 (309)
T ss_dssp TCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEEC
T ss_pred cCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEee
Confidence 446899998632 124458899999844455
No 110
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=40.65 E-value=13 Score=29.27 Aligned_cols=52 Identities=19% Similarity=0.376 Sum_probs=38.1
Q ss_pred CceeCccCCCCC-CCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYN-ADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~-~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+..|..|.+++. -+..-..|-.|..=+=.+|-+..... .....|+|..|...
T Consensus 55 ~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~-~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 55 VNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNN-RPHPVWLCKICLEQ 107 (134)
T ss_dssp SSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCS-SSSCCEEEHHHHHH
T ss_pred CccccccCCCcccccCCCCCCCCCCcccccccCCccCCC-CCccceechhhHHH
Confidence 456999999984 24566899999988888888765321 12357999999864
No 111
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=39.53 E-value=23 Score=31.30 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=28.8
Q ss_pred cCCceeCccCCCCC-CCCceEeccCCCCeeeccccccC
Q 027884 159 HSETLCGSCGGNYN-ADEFWIGCDICERWFHGKCVKIT 195 (217)
Q Consensus 159 ~~~~~C~iC~~py~-~d~~mIqCD~Ce~WfH~~CVgIt 195 (217)
...+.|..|+.... -...-.+|..|+..+|..|...-
T Consensus 355 ~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~ 392 (406)
T 2vrw_B 355 EETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRV 392 (406)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGS
T ss_pred CCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhC
Confidence 45678999998764 23455789999999999998744
No 112
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=37.31 E-value=28 Score=21.82 Aligned_cols=37 Identities=27% Similarity=0.505 Sum_probs=28.2
Q ss_pred CCceeCccCCCCCC-CCceEeccCCCCeeeccccccCc
Q 027884 160 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 160 ~~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
..++|..|++.--. .....+|..|+.-.|.+|...-+
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~ 47 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVA 47 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSC
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhcC
Confidence 45789899876531 35678999999999999987543
No 113
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=37.05 E-value=10 Score=28.97 Aligned_cols=51 Identities=20% Similarity=0.352 Sum_probs=26.8
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeec--cccccCcc----ccCCCCeEEcCCCCC
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHG--KCVKITPA----KAENIKQYKCPSCSM 212 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~--~CVgIt~~----~a~~~d~y~Cp~C~~ 212 (217)
..|+.|+++-...+....|+.|+.=|-. .|=.-..+ .+=....|+|..|..
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYFC~~chg 89 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYFCQHGHG 89 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEEETTTTE
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchhhccCCc
Confidence 5688888765333345568888764422 23211110 111113688888874
No 114
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=36.86 E-value=14 Score=27.25 Aligned_cols=46 Identities=22% Similarity=0.285 Sum_probs=30.8
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+. .-+.. .|+.-|+..|+.---... ...||.|+..
T Consensus 17 ~~~~C~IC~~~~~---~p~~~-~CgH~fC~~Ci~~~~~~~----~~~CP~Cr~~ 62 (118)
T 3hct_A 17 SKYECPICLMALR---EAVQT-PCGHRFCKACIIKSIRDA----GHKCPVDNEI 62 (118)
T ss_dssp GGGBCTTTCSBCS---SEEEC-TTSCEEEHHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCCcCChhhc---CeEEC-CcCChhhHHHHHHHHhhC----CCCCCCCCCC
Confidence 4467999998775 22444 699999999986432211 1379999753
No 115
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=36.35 E-value=9.2 Score=25.00 Aligned_cols=50 Identities=18% Similarity=0.504 Sum_probs=30.6
Q ss_pred CceeCccCC-CCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCcC
Q 027884 161 ETLCGSCGG-NYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMKR 214 (217)
Q Consensus 161 ~~~C~iC~~-py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~kr 214 (217)
+..|++|.. .+.....-+.=-.|+.-||..|+.---.. ....||.|+..-
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~~ 53 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR----GAGNCPECGTPL 53 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHT----TSSSCTTTCCCC
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHc----CCCcCCCCCCcc
Confidence 456999988 44322211111378889999999643211 235799998743
No 116
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=36.23 E-value=17 Score=26.70 Aligned_cols=44 Identities=23% Similarity=0.466 Sum_probs=29.5
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+.. - +.--.|+.-|+..|+.-... ..||.|+..
T Consensus 21 ~~~~C~IC~~~~~~-p--v~~~~CgH~fC~~Ci~~~~~-------~~CP~Cr~~ 64 (117)
T 1jm7_B 21 KLLRCSRCTNILRE-P--VCLGGCEHIFCSNCVSDCIG-------TGCPVCYTP 64 (117)
T ss_dssp HTTSCSSSCSCCSS-C--BCCCSSSCCBCTTTGGGGTT-------TBCSSSCCB
T ss_pred hCCCCCCCChHhhC-c--cEeCCCCCHHHHHHHHHHhc-------CCCcCCCCc
Confidence 45679999987752 2 22225788888999854321 569999864
No 117
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=33.96 E-value=7.3 Score=28.43 Aligned_cols=49 Identities=22% Similarity=0.500 Sum_probs=31.4
Q ss_pred CCceeCccCCCCCCC---CceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNAD---EFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d---~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
+...|++|...+.+. +..+.--.|+.-||..|+.---. ....||.|+..
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~-----~~~~CP~Cr~~ 57 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLK-----NANTCPTCRKK 57 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHT-----TCSBCTTTCCB
T ss_pred CCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHH-----hCCCCCCCCCc
Confidence 345799999876421 22333347888999999864321 12378888764
No 118
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=33.37 E-value=39 Score=23.46 Aligned_cols=36 Identities=19% Similarity=0.445 Sum_probs=28.7
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
...++|..|+.-- .....+|..|+.=.|.+|...-+
T Consensus 33 ~~pt~C~~C~~~l--~~qG~kC~~C~~~cHkkC~~~V~ 68 (72)
T 2fnf_X 33 GGPGWCDLCGREV--LRQALRCANCKFTCHSECRSLIQ 68 (72)
T ss_dssp SSCCBCTTTSSBC--SSCCEECTTSSCEECTGGGGGCC
T ss_pred CCCcchhhhhHHH--HhCcCccCCCCCeechhhhccCc
Confidence 3567899998765 45668999999999999987544
No 119
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=32.65 E-value=12 Score=23.17 Aligned_cols=23 Identities=22% Similarity=0.629 Sum_probs=15.6
Q ss_pred eeCccCCCCCC-----CCceEeccCCCC
Q 027884 163 LCGSCGGNYNA-----DEFWIGCDICER 185 (217)
Q Consensus 163 ~C~iC~~py~~-----d~~mIqCD~Ce~ 185 (217)
.|+.|+.|+.. +.++..|+.|+.
T Consensus 2 lC~~C~~peT~l~~~~~~~~l~C~aCG~ 29 (36)
T 1k81_A 2 ICRECGKPDTKIIKEGRVHLLKCMACGA 29 (36)
T ss_dssp CCSSSCSCEEEEEEETTEEEEEEETTTE
T ss_pred CCcCCCCCCcEEEEeCCcEEEEhhcCCC
Confidence 58889888643 445566777764
No 120
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=32.58 E-value=32 Score=21.71 Aligned_cols=34 Identities=24% Similarity=0.511 Sum_probs=26.9
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
..++|..|++.-- .-.+|..|+.-.|.+|...-+
T Consensus 13 ~pt~C~~C~~~l~---qG~~C~~C~~~~H~~C~~~v~ 46 (52)
T 1faq_A 13 KLAFCDICQKFLL---NGFRCQTCGYKFHEHCSTKVP 46 (52)
T ss_dssp SCEECTTSSSEEC---SEEECTTTTCCBCSTTSSSSS
T ss_pred CCcCCCCcccccc---cCCEeCCCCCeEChhHHhhCc
Confidence 4578989987543 567899999999999987544
No 121
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=32.01 E-value=47 Score=24.43 Aligned_cols=34 Identities=26% Similarity=0.580 Sum_probs=27.1
Q ss_pred CceEeccCCC-CeeeccccccCccccCCCCeEEcCCCCC
Q 027884 175 EFWIGCDICE-RWFHGKCVKITPAKAENIKQYKCPSCSM 212 (217)
Q Consensus 175 ~~mIqCD~Ce-~WfH~~CVgIt~~~a~~~d~y~Cp~C~~ 212 (217)
-.+|.|..|. .=-|..|..+... .+.|.|..|..
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~l~~~----~~~weC~~C~~ 78 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSSLRPN----SKKWECNECLP 78 (85)
T ss_dssp TBCEECSSSCCCEECSGGGTCCTT----CSCCCCTTTSC
T ss_pred EEEEeCcccCCchhHHHHhCCcCC----CCCEECCcCcc
Confidence 3468899996 7789999998643 36799999985
No 122
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=31.66 E-value=18 Score=28.17 Aligned_cols=46 Identities=15% Similarity=0.383 Sum_probs=31.8
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|...+. + ..+ -.|..-|+..|+.-.-.. ..+.||.|+..
T Consensus 77 ~~~~C~IC~~~~~-~-pv~--~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 122 (150)
T 1z6u_A 77 QSFMCVCCQELVY-Q-PVT--TECFHNVCKDCLQRSFKA----QVFSCPACRHD 122 (150)
T ss_dssp HHTBCTTTSSBCS-S-EEE--CTTSCEEEHHHHHHHHHT----TCCBCTTTCCB
T ss_pred cCCEeecCChhhc-C-CEE--cCCCCchhHHHHHHHHHh----CCCcCCCCCcc
Confidence 3457999998775 2 222 378999999998643321 34789999864
No 123
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.16 E-value=51 Score=23.13 Aligned_cols=37 Identities=22% Similarity=0.460 Sum_probs=28.6
Q ss_pred cCCceeCccCCCCCC-CCceEeccCCCCeeeccccccC
Q 027884 159 HSETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKIT 195 (217)
Q Consensus 159 ~~~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt 195 (217)
...++|..|+..--. .....+|..|..-.|..|....
T Consensus 26 ~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v 63 (83)
T 2yuu_A 26 GQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKI 63 (83)
T ss_dssp SSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTC
T ss_pred CCCcChhhcChhhccccccccccCCcCCeeChhhhhhC
Confidence 356789999876531 3467899999999999998754
No 124
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=30.72 E-value=44 Score=22.32 Aligned_cols=37 Identities=27% Similarity=0.535 Sum_probs=28.2
Q ss_pred CCceeCccCCCCCC-CCceEeccCCCCeeeccccccCc
Q 027884 160 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 160 ~~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
..++|..|++..-. ...-.+|..|..-.|.+|....+
T Consensus 22 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~ 59 (65)
T 2enz_A 22 SPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVA 59 (65)
T ss_dssp SCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTSC
T ss_pred CCcCchhcChhheecCCcccccCCCCCccCHhHHhhCc
Confidence 45789999875431 34568999999999999987543
No 125
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=30.52 E-value=51 Score=22.92 Aligned_cols=38 Identities=21% Similarity=0.423 Sum_probs=29.1
Q ss_pred cCCceeCccCCCCCC-CCceEeccCCCCeeeccccccCc
Q 027884 159 HSETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 159 ~~~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
...++|..|++.--. ...-.+|..|..-.|..|+...+
T Consensus 32 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~ 70 (77)
T 2enn_A 32 PQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVI 70 (77)
T ss_dssp SSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCC
T ss_pred CCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCc
Confidence 467899999875431 34668999999999999987543
No 126
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=30.34 E-value=14 Score=28.83 Aligned_cols=32 Identities=34% Similarity=0.684 Sum_probs=21.3
Q ss_pred cccCCceeCccCCCCCC--C----CceEeccCCCCeeec
Q 027884 157 DEHSETLCGSCGGNYNA--D----EFWIGCDICERWFHG 189 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~--d----~~mIqCD~Ce~WfH~ 189 (217)
.......| .|+..|.- + +..|+|..|..||..
T Consensus 108 ~~~f~~~C-rCG~~f~i~~~~l~~~~~v~C~sCSl~~~v 145 (155)
T 2l6l_A 108 DHSFYLSC-RCGGKYSVSKDEAEEVSLISCDTCSLIIEL 145 (155)
T ss_dssp TTEEEEEC-SSSCEEEEETTHHHHCCEEECSSSSCEEEE
T ss_pred CcEEEEcC-CCCCeEEecHHHhCCCCEEECCCCceEEEE
Confidence 34455667 58875532 1 257999999999854
No 127
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=29.93 E-value=28 Score=24.47 Aligned_cols=31 Identities=16% Similarity=0.138 Sum_probs=21.9
Q ss_pred CCceeCccCCCCC--CCCceEeccCCCCeeecc
Q 027884 160 SETLCGSCGGNYN--ADEFWIGCDICERWFHGK 190 (217)
Q Consensus 160 ~~~~C~iC~~py~--~d~~mIqCD~Ce~WfH~~ 190 (217)
....|+.|+.+-. .++....|..|+.+|=..
T Consensus 7 eiL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (69)
T 2pk7_A 7 DILACPICKGPLKLSADKTELISKGAGLAYPIR 39 (69)
T ss_dssp GTCCCTTTCCCCEECTTSSEEEETTTTEEEEEE
T ss_pred hheeCCCCCCcCeEeCCCCEEEcCCCCcEecCc
Confidence 3457999987643 345677899999888654
No 128
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=29.33 E-value=28 Score=22.67 Aligned_cols=13 Identities=23% Similarity=0.884 Sum_probs=10.5
Q ss_pred CCeEEcCCCCCcC
Q 027884 202 IKQYKCPSCSMKR 214 (217)
Q Consensus 202 ~d~y~Cp~C~~kr 214 (217)
++.|.||.|...+
T Consensus 28 P~dw~CP~Cg~~k 40 (46)
T 6rxn_A 28 PDDWCCPVCGVSK 40 (46)
T ss_dssp CTTCBCTTTCCBG
T ss_pred CCCCcCcCCCCcH
Confidence 5679999998654
No 129
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.76 E-value=68 Score=22.68 Aligned_cols=37 Identities=32% Similarity=0.651 Sum_probs=28.5
Q ss_pred CCceeCccCCCCCC-CCceEeccCCCCeeeccccccCc
Q 027884 160 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 160 ~~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
..++|..|+..--. ...-.+|..|..-.|.+|...-+
T Consensus 27 ~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (85)
T 2eli_A 27 SPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVP 64 (85)
T ss_dssp SCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSC
T ss_pred CCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcC
Confidence 56789999875431 34678999999999999987543
No 130
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=28.63 E-value=24 Score=24.74 Aligned_cols=30 Identities=20% Similarity=0.155 Sum_probs=20.9
Q ss_pred CceeCccCCCCC--CCCceEeccCCCCeeecc
Q 027884 161 ETLCGSCGGNYN--ADEFWIGCDICERWFHGK 190 (217)
Q Consensus 161 ~~~C~iC~~py~--~d~~mIqCD~Ce~WfH~~ 190 (217)
...|+.|+.+-. ..+....|..|+.+|=..
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKSKDELICKGDRLAFPIK 39 (68)
T ss_dssp ECBCTTTCCBCEEETTTTEEEETTTTEEEEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEecCC
Confidence 357899987642 245667799999888543
No 131
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=28.35 E-value=27 Score=24.41 Aligned_cols=31 Identities=13% Similarity=0.083 Sum_probs=21.7
Q ss_pred CCceeCccCCCCC--CCCceEeccCCCCeeecc
Q 027884 160 SETLCGSCGGNYN--ADEFWIGCDICERWFHGK 190 (217)
Q Consensus 160 ~~~~C~iC~~py~--~d~~mIqCD~Ce~WfH~~ 190 (217)
....|+.|+.+-. .......|..|+.+|=..
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (68)
T 2jr6_A 7 DILVCPVTKGRLEYHQDKQELWSRQAKLAYPIK 39 (68)
T ss_dssp CCCBCSSSCCBCEEETTTTEEEETTTTEEEEEE
T ss_pred hheECCCCCCcCeEeCCCCEEEcCCCCcEecCC
Confidence 4457999987642 245667799999888554
No 132
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=27.67 E-value=27 Score=27.74 Aligned_cols=24 Identities=17% Similarity=0.541 Sum_probs=18.1
Q ss_pred ceeCccCCCCCC-----CCceEeccCCCC
Q 027884 162 TLCGSCGGNYNA-----DEFWIGCDICER 185 (217)
Q Consensus 162 ~~C~iC~~py~~-----d~~mIqCD~Ce~ 185 (217)
..|..|+.|+.. ...++.|+.|+.
T Consensus 103 VlC~~C~sPdT~l~k~~r~~~l~C~ACGa 131 (138)
T 1nee_A 103 VICHECNRPDTRIIREGRISLLKCEACGA 131 (138)
T ss_dssp HHHTCCSSCSSCCEEETTTTEEECSTTSC
T ss_pred EECCCCCCcCcEEEEcCCeEEEEccCCCC
Confidence 569999998764 456777888864
No 133
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=27.63 E-value=19 Score=26.16 Aligned_cols=45 Identities=20% Similarity=0.366 Sum_probs=30.9
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
...|++|...+. ..+. -.|+..||..|+.---.. ....||.|+..
T Consensus 23 ~~~C~IC~~~~~---~p~~-~~CgH~fC~~Ci~~~~~~----~~~~CP~Cr~~ 67 (116)
T 1rmd_A 23 SISCQICEHILA---DPVE-TSCKHLFCRICILRCLKV----MGSYCPSCRYP 67 (116)
T ss_dssp HTBCTTTCSBCS---SEEE-CTTSCEEEHHHHHHHHHH----TCSBCTTTCCB
T ss_pred CCCCCCCCcHhc---CcEE-cCCCCcccHHHHHHHHhH----CcCcCCCCCCC
Confidence 467999998775 2333 379999999998633221 13469999864
No 134
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=26.63 E-value=18 Score=26.84 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=22.9
Q ss_pred cccCCceeCccCCCCCC-------CCceEeccCCCCeeeccc
Q 027884 157 DEHSETLCGSCGGNYNA-------DEFWIGCDICERWFHGKC 191 (217)
Q Consensus 157 ee~~~~~C~iC~~py~~-------d~~mIqCD~Ce~WfH~~C 191 (217)
++.....| -||..|.- +...++|+.|.-|....-
T Consensus 19 ~~~y~ypC-rCGd~F~IteedLe~ge~iv~C~sCSL~IkV~y 59 (89)
T 2jr7_A 19 SETYFYPC-PCGDNFSITKEDLENGEDVATCPSCSLIIKVIY 59 (89)
T ss_dssp TTEEEEEC-TTSSEEEEEHHHHHHTCCEEECTTTCCEEEEEC
T ss_pred CCEEEEcC-CCCCEEEECHHHHhCCCEEEECCCCccEEEEEE
Confidence 33455557 58865432 567899999999976543
No 135
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=26.49 E-value=25 Score=24.75 Aligned_cols=52 Identities=25% Similarity=0.438 Sum_probs=35.0
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeeccccccCccc--cC-CCCeEEcCC--CCCc
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAK--AE-NIKQYKCPS--CSMK 213 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~--a~-~~d~y~Cp~--C~~k 213 (217)
...|++|-..+. +..++.-..|+.-|...|+.-.-.. .+ ......||. |...
T Consensus 5 ~~~C~IC~~~~~-~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYP-VEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCB-GGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccc-cccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 446999988765 5678877789989999997522110 01 123589999 9864
No 136
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=26.38 E-value=24 Score=23.70 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=22.3
Q ss_pred CCceeCccCCCCCCCCceEecc--CCCCeeecc
Q 027884 160 SETLCGSCGGNYNADEFWIGCD--ICERWFHGK 190 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD--~Ce~WfH~~ 190 (217)
.-..|+.|+.+-..+.....|. .|..+|-..
T Consensus 9 ~iL~CP~c~~~L~~~~~~L~C~~~~c~~~YPI~ 41 (56)
T 2kpi_A 9 EILACPACHAPLEERDAELICTGQDCGLAYPVR 41 (56)
T ss_dssp TSCCCSSSCSCEEEETTEEEECSSSCCCEEEEE
T ss_pred hheeCCCCCCcceecCCEEEcCCcCCCcEEeeE
Confidence 4467999998743344667899 899988654
No 137
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=26.34 E-value=27 Score=24.58 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=22.2
Q ss_pred CCceeCccCCCC--CCCCceEeccCCCCeeecc
Q 027884 160 SETLCGSCGGNY--NADEFWIGCDICERWFHGK 190 (217)
Q Consensus 160 ~~~~C~iC~~py--~~d~~mIqCD~Ce~WfH~~ 190 (217)
....|+.|+.+- +..+....|..|+.+|=..
T Consensus 7 ~iL~CP~ck~~L~~~~~~~~LiC~~cg~~YPI~ 39 (70)
T 2js4_A 7 DILVCPVCKGRLEFQRAQAELVCNADRLAFPVR 39 (70)
T ss_dssp CCCBCTTTCCBEEEETTTTEEEETTTTEEEEEE
T ss_pred hheECCCCCCcCEEeCCCCEEEcCCCCceecCC
Confidence 345799998864 2245677899999988654
No 138
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=26.26 E-value=47 Score=23.19 Aligned_cols=46 Identities=4% Similarity=-0.262 Sum_probs=29.4
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.....|++|..... +..+ - .|+.-|-..|+.---.. ...||.|...
T Consensus 12 p~~~~CpI~~~~m~--dPV~-~-~cGhtf~r~~I~~~l~~-----~~~cP~~~~~ 57 (85)
T 2kr4_A 12 PDEFRDPLMDTLMT--DPVR-L-PSGTVMDRSIILRHLLN-----SPTDPFNRQM 57 (85)
T ss_dssp CTTTBCTTTCSBCS--SEEE-C-TTSCEEEHHHHHHHHHH-----CSBCTTTCCB
T ss_pred chheECcccCchhc--CCeE-C-CCCCEECHHHHHHHHhc-----CCCCCCCcCC
Confidence 45678999998764 2222 2 27878888887533221 3679988753
No 139
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=25.18 E-value=54 Score=19.56 Aligned_cols=9 Identities=44% Similarity=1.128 Sum_probs=6.4
Q ss_pred eEEcCCCCC
Q 027884 204 QYKCPSCSM 212 (217)
Q Consensus 204 ~y~Cp~C~~ 212 (217)
.|.|+.|..
T Consensus 32 ~~~C~~C~~ 40 (57)
T 3uk3_C 32 PYKCEFCEY 40 (57)
T ss_dssp CEECSSSSC
T ss_pred CcCCCCCcc
Confidence 477777765
No 140
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=25.13 E-value=28 Score=27.03 Aligned_cols=46 Identities=22% Similarity=0.285 Sum_probs=31.8
Q ss_pred CCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 160 SETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 160 ~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
....|++|..... .-+++ .|+.-|...|+.-.-... ...||.|+..
T Consensus 17 ~~~~C~IC~~~~~---~pv~~-~CgH~fC~~Ci~~~~~~~----~~~CP~Cr~~ 62 (170)
T 3hcs_A 17 SKYECPICLMALR---EAVQT-PCGHRFCKACIIKSIRDA----GHKCPVDNEI 62 (170)
T ss_dssp GGGBCTTTCSBCS---SEEEC-TTSCEEEHHHHHHHHHHH----CSBCTTTCCB
T ss_pred CCCCCCCCChhhc---CcEEC-CCCCHHHHHHHHHHHHhC----CCCCCCCccC
Confidence 4567999998875 34666 699999999986432211 1379998753
No 141
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=24.47 E-value=35 Score=23.85 Aligned_cols=31 Identities=10% Similarity=0.020 Sum_probs=21.7
Q ss_pred CCceeCccCCCCC--CCCceEeccCCCCeeecc
Q 027884 160 SETLCGSCGGNYN--ADEFWIGCDICERWFHGK 190 (217)
Q Consensus 160 ~~~~C~iC~~py~--~d~~mIqCD~Ce~WfH~~ 190 (217)
....|+.|+.+-. ..+....|..|+.+|=..
T Consensus 9 eiL~CP~ck~~L~~~~~~g~LvC~~c~~~YPI~ 41 (67)
T 2jny_A 9 EVLACPKDKGPLRYLESEQLLVNERLNLAYRID 41 (67)
T ss_dssp CCCBCTTTCCBCEEETTTTEEEETTTTEEEEEE
T ss_pred HHhCCCCCCCcCeEeCCCCEEEcCCCCccccCC
Confidence 4567999987642 245567799999888553
No 142
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=23.78 E-value=23 Score=25.91 Aligned_cols=31 Identities=19% Similarity=0.418 Sum_probs=21.5
Q ss_pred ccCCceeCccCCCCC-------CCCceEeccCCCCeeec
Q 027884 158 EHSETLCGSCGGNYN-------ADEFWIGCDICERWFHG 189 (217)
Q Consensus 158 e~~~~~C~iC~~py~-------~d~~mIqCD~Ce~WfH~ 189 (217)
+.....| -||..|. .+...++|+.|.-|...
T Consensus 20 ~~y~ypC-rCGd~F~it~edL~~ge~iv~C~sCSL~I~V 57 (83)
T 1yop_A 20 QMFTYPC-PCGDRFQIYLDDMFEGEKVAVCPSCSLMIDV 57 (83)
T ss_dssp TEEEEEE-TTTEEEEEEHHHHHTTCCEEECSSSCCEEEC
T ss_pred CEEEEeC-CCCCeEEECHHHHhCCCEEEECCCCccEEEE
Confidence 3455567 5886442 25679999999999765
No 143
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=23.65 E-value=29 Score=27.90 Aligned_cols=24 Identities=21% Similarity=0.710 Sum_probs=18.0
Q ss_pred ceeCccCCCCCC-----CCceEeccCCCC
Q 027884 162 TLCGSCGGNYNA-----DEFWIGCDICER 185 (217)
Q Consensus 162 ~~C~iC~~py~~-----d~~mIqCD~Ce~ 185 (217)
..|..|+.|+.. ...++.|+.|+.
T Consensus 105 VlC~~C~sPdT~L~k~~r~~~l~C~ACGa 133 (148)
T 2d74_B 105 VICPVCGSPDTKIIKRDRFHFLKCEACGA 133 (148)
T ss_dssp SSCSSSCCTTCCCCBSSSSBCCCCSSSCC
T ss_pred EECCCCCCcCcEEEEeCCEEEEEecCCCC
Confidence 579999998764 456677888864
No 144
>3ddl_A Xanthorhodopsin; carotenoid, ION pump, light-harvesting, antenna, retinal, transport protein; HET: SXN UNL RET PX4 PCW; 1.90A {Salinibacter ruber}
Probab=23.40 E-value=17 Score=31.55 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=34.9
Q ss_pred cchhheehccchHHHHHHHHhhcccChhhhhhhhhhccCCCchhhhhhc
Q 027884 65 DWLSLVAVHTDSWLLSVAFYLGARLNRNERKRLFSLINDQPTVFEVVTE 113 (217)
Q Consensus 65 ~wl~~va~h~d~wl~~~a~~~~~~~~~~~r~rLf~mIndLPTVfEvVtg 113 (217)
|||.++.+ +=+++..||+..+.....++|+|-.+.-|.|....++-
T Consensus 18 ~~lw~~~a---~m~~atl~F~~~~~~v~~~~R~~~~v~~lit~IAai~Y 63 (273)
T 3ddl_A 18 NMFSFTVA---TMTASFVFFVLARNNVAPKYRISMMVSALVVFIAGYHY 63 (273)
T ss_dssp HHHHHHHH---HHHHHHHHHHHGGGGSCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHHHHHHHHHHHHccCCcceehhhHHHHHHHHHHHHHH
Confidence 56666554 44567778888898889999999999998887765543
No 145
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=23.24 E-value=53 Score=22.06 Aligned_cols=37 Identities=24% Similarity=0.452 Sum_probs=28.1
Q ss_pred CCceeCccCCCCCC-CCceEeccCCCCeeeccccccCc
Q 027884 160 SETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 160 ~~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
..++|..|+..--. ...-.+|..|..-.|.+|....+
T Consensus 23 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~ 60 (66)
T 1y8f_A 23 TPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLN 60 (66)
T ss_dssp SCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHSC
T ss_pred CCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhCc
Confidence 55789999875531 24568899999999999987644
No 146
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=22.61 E-value=66 Score=21.38 Aligned_cols=37 Identities=27% Similarity=0.490 Sum_probs=27.7
Q ss_pred CCceeCccCCCCC-CCCceEeccCCCCeeeccccccCc
Q 027884 160 SETLCGSCGGNYN-ADEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 160 ~~~~C~iC~~py~-~d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
..++|..|+..-- -...-.+|..|..-.|.+|...-+
T Consensus 19 ~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~ 56 (65)
T 3uej_A 19 SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVA 56 (65)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSC
T ss_pred CCCcccccChhhhccCceeeECCCCCCeEchhHhhhCC
Confidence 4578999987532 134568999999999999986543
No 147
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=22.34 E-value=44 Score=22.16 Aligned_cols=36 Identities=19% Similarity=0.445 Sum_probs=28.2
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
...++|..|+.-- .....+|..|..=.|.+|...-+
T Consensus 20 ~~pt~C~~C~~~i--~kqg~kC~~C~~~cH~kC~~~v~ 55 (59)
T 1rfh_A 20 GGPGWCDLCGREV--LRQALRCANCKFTCHSECRSLIQ 55 (59)
T ss_dssp SCCEECTTTCSEE--CSCCEECTTTSCEECHHHHTTCC
T ss_pred CCCeEchhcchhh--hhCccEeCCCCCeEehhhhhhCc
Confidence 3567898998765 45678999999999999986543
No 148
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=22.27 E-value=34 Score=27.43 Aligned_cols=26 Identities=27% Similarity=0.756 Sum_probs=19.8
Q ss_pred ceeCccCCCCCC-CCceEeccCCC-Cee
Q 027884 162 TLCGSCGGNYNA-DEFWIGCDICE-RWF 187 (217)
Q Consensus 162 ~~C~iC~~py~~-d~~mIqCD~Ce-~Wf 187 (217)
..|+.|+..|.. ++.+.-|..|. +|-
T Consensus 28 P~CP~C~seytYeDg~l~vCPeC~hEW~ 55 (138)
T 2akl_A 28 PPCPQCNSEYTYEDGALLVCPECAHEWS 55 (138)
T ss_dssp CCCTTTCCCCCEECSSSEEETTTTEEEC
T ss_pred CCCCCCCCcceEecCCeEECCccccccC
Confidence 569999987754 56677899997 783
No 149
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=21.94 E-value=52 Score=21.47 Aligned_cols=31 Identities=26% Similarity=0.548 Sum_probs=24.8
Q ss_pred ceeCccCCCCCCCCceEeccCCCCeeeccccccC
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWFHGKCVKIT 195 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt 195 (217)
+.|..|++..- . -.+|..|.-=.|.+|...-
T Consensus 15 t~C~~C~k~i~-~--G~kC~~Ck~~cH~kC~~~v 45 (49)
T 1kbe_A 15 QVCNVCQKSMI-F--GVKCKHCRLKCHNKCTKEA 45 (49)
T ss_dssp CCCSSSCCSSC-C--EEEETTTTEEESSSCTTTS
T ss_pred cCccccCceeE-C--cCCCCCCCCccchhhcCcC
Confidence 57989988764 2 3789999999999998743
No 150
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=21.76 E-value=54 Score=23.26 Aligned_cols=30 Identities=17% Similarity=0.584 Sum_probs=20.0
Q ss_pred ccCCceeCccCCCCCCCCceEeccCCC-Ceeecccc
Q 027884 158 EHSETLCGSCGGNYNADEFWIGCDICE-RWFHGKCV 192 (217)
Q Consensus 158 e~~~~~C~iC~~py~~d~~mIqCD~Ce-~WfH~~CV 192 (217)
+....+|++|... --+.|-.|+ .-|=..|-
T Consensus 5 ~ee~pWC~ICneD-----AtlrC~gCdgDLYC~rC~ 35 (67)
T 2d8v_A 5 SSGLPWCCICNED-----ATLRCAGCDGDLYCARCF 35 (67)
T ss_dssp CCCCSSCTTTCSC-----CCEEETTTTSEEECSSHH
T ss_pred CcCCCeeEEeCCC-----CeEEecCCCCceehHHHH
Confidence 3445679899853 348888884 66666664
No 151
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=21.66 E-value=96 Score=19.67 Aligned_cols=12 Identities=17% Similarity=0.672 Sum_probs=7.1
Q ss_pred CceeCccCCCCC
Q 027884 161 ETLCGSCGGNYN 172 (217)
Q Consensus 161 ~~~C~iC~~py~ 172 (217)
...|..|++.+.
T Consensus 17 ~~~C~~C~k~f~ 28 (74)
T 2lce_A 17 PYKCDRCQASFR 28 (74)
T ss_dssp SBCCTTSSCCBS
T ss_pred CeECCCCCceeC
Confidence 345666766554
No 152
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=21.26 E-value=46 Score=32.83 Aligned_cols=27 Identities=30% Similarity=0.902 Sum_probs=20.4
Q ss_pred CceeCccCCCCCCCCceEeccCCCCeeec
Q 027884 161 ETLCGSCGGNYNADEFWIGCDICERWFHG 189 (217)
Q Consensus 161 ~~~C~iC~~py~~d~~mIqCD~Ce~WfH~ 189 (217)
+.-|.+|+-.. -.-.++|-.|++||--
T Consensus 11 ~~~c~yc~~~~--~~~~~~c~~~~~wfcn 37 (802)
T 2xzl_A 11 DNSCAYCGIDS--AKCVIKCNSCKKWFCN 37 (802)
T ss_dssp -CCCTTTCCCC--TTTEEEETTTCCEEEC
T ss_pred hhhCcccCCCC--CceEEEeCCCCcEecC
Confidence 34588888654 4578999999999954
No 153
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=21.19 E-value=65 Score=30.12 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=28.3
Q ss_pred cCCceeCccCCCC-CCCCceEeccCCCCeeeccccccC
Q 027884 159 HSETLCGSCGGNY-NADEFWIGCDICERWFHGKCVKIT 195 (217)
Q Consensus 159 ~~~~~C~iC~~py-~~d~~mIqCD~Ce~WfH~~CVgIt 195 (217)
...+.|..|+..- .-...-..|..|+...|..|.+..
T Consensus 527 ~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v 564 (587)
T 3ky9_A 527 EETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV 564 (587)
T ss_dssp SSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS
T ss_pred CCCcccccccccccccccCCcCCCCCCCccchhhhhcC
Confidence 4567899998764 223345789999999999999854
No 154
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=21.05 E-value=54 Score=23.92 Aligned_cols=26 Identities=19% Similarity=0.469 Sum_probs=16.8
Q ss_pred ceeCccCCCCCCCCceEeccCCCCee
Q 027884 162 TLCGSCGGNYNADEFWIGCDICERWF 187 (217)
Q Consensus 162 ~~C~iC~~py~~d~~mIqCD~Ce~Wf 187 (217)
..|+.|+.+-..++...+|+.|+.=|
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~ 28 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDF 28 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEE
T ss_pred CCCCCCCCccccCCCceECccccccC
Confidence 45777777654455566777777643
No 155
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=20.86 E-value=44 Score=24.35 Aligned_cols=33 Identities=24% Similarity=0.403 Sum_probs=22.1
Q ss_pred cccCCceeCccCCCCC-------CCCceEeccCCCCeeecc
Q 027884 157 DEHSETLCGSCGGNYN-------ADEFWIGCDICERWFHGK 190 (217)
Q Consensus 157 ee~~~~~C~iC~~py~-------~d~~mIqCD~Ce~WfH~~ 190 (217)
++.....| -|+..|. .+...++|+.|.-|....
T Consensus 26 ~~~y~y~C-rCGd~F~it~edL~~ge~iv~C~sCSL~I~V~ 65 (83)
T 1wge_A 26 SETYFYPC-PCGDNFAITKEDLENGEDVATCPSCSLIIKVI 65 (83)
T ss_dssp TTEEEECC-SSSSCEEEEHHHHHTTCCEEECTTTCCEEEEE
T ss_pred CCEEEEeC-CCCCEEEECHHHHhCCCEEEECCCCceEEEEE
Confidence 33444557 5886553 156789999999997653
No 156
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=20.80 E-value=35 Score=29.50 Aligned_cols=37 Identities=27% Similarity=0.488 Sum_probs=29.1
Q ss_pred eehccchHHHHHHHHhhcccChhhhhhhhhhccCCCchhh
Q 027884 70 VAVHTDSWLLSVAFYLGARLNRNERKRLFSLINDQPTVFE 109 (217)
Q Consensus 70 va~h~d~wl~~~a~~~~~~~~~~~r~rLf~mIndLPTVfE 109 (217)
=|||+.+.-.-+--+. .|+.+|.++|..+.+.|.|-+
T Consensus 105 E~iHs~sYs~il~tl~---~d~~e~~~~f~~~~~~p~l~~ 141 (286)
T 3olj_A 105 ENIHSEMYSLLIDTYI---KDPKEREFLFNAIETMPCVKK 141 (286)
T ss_dssp HHHHHHHHHHHHHHHC---CCHHHHHHHHTHHHHCGGGHH
T ss_pred HHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHhCHHHHH
Confidence 4699998776665554 388899999999999998753
No 157
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.70 E-value=30 Score=23.97 Aligned_cols=38 Identities=18% Similarity=0.524 Sum_probs=28.2
Q ss_pred cCCceeCccCCCCCC-CCceEeccCCCCeeeccccccCc
Q 027884 159 HSETLCGSCGGNYNA-DEFWIGCDICERWFHGKCVKITP 196 (217)
Q Consensus 159 ~~~~~C~iC~~py~~-d~~mIqCD~Ce~WfH~~CVgIt~ 196 (217)
...++|..|+..--. ...-.+|..|..-.|.+|+...+
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~ 64 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVE 64 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGS
T ss_pred CCCcCchhcChhhccccCCccccCCCCCccChhHHhhCC
Confidence 356889999875421 13458999999999999997543
No 158
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=20.62 E-value=1.2e+02 Score=21.83 Aligned_cols=46 Identities=4% Similarity=-0.266 Sum_probs=29.4
Q ss_pred cCCceeCccCCCCCCCCceEeccCCCCeeeccccccCccccCCCCeEEcCCCCCc
Q 027884 159 HSETLCGSCGGNYNADEFWIGCDICERWFHGKCVKITPAKAENIKQYKCPSCSMK 213 (217)
Q Consensus 159 ~~~~~C~iC~~py~~d~~mIqCD~Ce~WfH~~CVgIt~~~a~~~d~y~Cp~C~~k 213 (217)
.....|++|..... +..+- .|+.-|-..|+.---. ....||.|...
T Consensus 27 p~~~~CpI~~~~m~--dPV~~--~cGhtf~r~~I~~~l~-----~~~~cP~~~~~ 72 (100)
T 2kre_A 27 PDEFRDPLMDTLMT--DPVRL--PSGTIMDRSIILRHLL-----NSPTDPFNRQT 72 (100)
T ss_dssp STTTBCTTTCSBCS--SEEEE--TTTEEEEHHHHHHHTT-----SCSBCSSSCCB
T ss_pred cHhhCCcCccCccc--CCeEC--CCCCEEchHHHHHHHH-----cCCCCCCCCCC
Confidence 45678999998764 23322 2777788888753321 13679999753
No 159
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=20.57 E-value=72 Score=18.96 Aligned_cols=9 Identities=33% Similarity=1.180 Sum_probs=6.4
Q ss_pred eEEcCCCCC
Q 027884 204 QYKCPSCSM 212 (217)
Q Consensus 204 ~y~Cp~C~~ 212 (217)
.|.|+.|..
T Consensus 29 ~~~C~~C~~ 37 (57)
T 1bbo_A 29 PYHCTYCNF 37 (57)
T ss_dssp CEECSSSSC
T ss_pred CccCCCCCc
Confidence 477777765
No 160
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=20.54 E-value=26 Score=26.13 Aligned_cols=22 Identities=36% Similarity=0.715 Sum_probs=19.6
Q ss_pred HhhcccChhhhhhhhhhccCCC
Q 027884 84 YLGARLNRNERKRLFSLINDQP 105 (217)
Q Consensus 84 ~~~~~~~~~~r~rLf~mIndLP 105 (217)
|+|..|.+++-...|.++||.-
T Consensus 61 FyG~~Lp~~EaeKVFELLNdFk 82 (95)
T 2k5c_A 61 FYGKTLPRREAEKVFELLNDFK 82 (95)
T ss_dssp EETTSSCTTTHHHHHHHHHSCS
T ss_pred HhcccCChHHHHHHHHHHHHcc
Confidence 6899999999999999999863
No 161
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=20.32 E-value=48 Score=22.27 Aligned_cols=14 Identities=21% Similarity=0.726 Sum_probs=10.9
Q ss_pred CCCeEEcCCCCCcC
Q 027884 201 NIKQYKCPSCSMKR 214 (217)
Q Consensus 201 ~~d~y~Cp~C~~kr 214 (217)
.++.|.||.|...+
T Consensus 33 lP~dw~CP~Cg~~K 46 (54)
T 4rxn_A 33 IPDDWVCPLCGVGK 46 (54)
T ss_dssp SCTTCBCTTTCCBG
T ss_pred CCCCCcCcCCCCcH
Confidence 35789999998654
Done!