BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>027886
MQAAENMALGKTQRGGPAAVMQSAAEANERAGFTSHSTATHIARDQGVTVSESTVADGNR
IITEAIGDQVLAQYATPEVPTRASGAALGRDQSTIGEALEATALSAGDKAVDQRDAAAIY
AAEARASATNEIKPGGIGSRAQSAATQNERTTFFSDKITISDVSGDATTKLSDDKPVTRE
DAEGIISPEIRNKPDMRTTPGGVASSMAAAARLNQSK

High Scoring Gene Products

Symbol, full name Information P value
AT3G22490 protein from Arabidopsis thaliana 1.0e-45
ATECP31
AT3G22500
protein from Arabidopsis thaliana 7.8e-39
RAB28
responsive to abscisic acid 28
protein from Arabidopsis thaliana 4.4e-29
AT5G27980 protein from Arabidopsis thaliana 5.9e-25
AT5G53270 protein from Arabidopsis thaliana 7.7e-16
AT5G53260 protein from Arabidopsis thaliana 3.3e-15

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027886
        (217 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2077081 - symbol:AT3G22490 "AT3G22490" species...   480  1.0e-45   1
TAIR|locus:2076996 - symbol:ATECP31 "AT3G22500" species:3...   415  7.8e-39   1
TAIR|locus:2007529 - symbol:RAB28 "responsive to abscisic...   323  4.4e-29   1
TAIR|locus:2143789 - symbol:AT5G27980 "AT5G27980" species...   284  5.9e-25   1
TAIR|locus:2154252 - symbol:AT5G53270 "AT5G53270" species...   198  7.7e-16   1
TAIR|locus:2154242 - symbol:AT5G53260 "AT5G53260" species...   192  3.3e-15   1


>TAIR|locus:2077081 [details] [associations]
            symbol:AT3G22490 "AT3G22490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=ISS] Pfam:PF04927 EMBL:CP002686
            EMBL:AP000731 UniGene:At.64534 InterPro:IPR007011
            ProtClustDB:CLSN2684142 EMBL:BT002907 EMBL:BT004425 IPI:IPI00543172
            RefSeq:NP_188888.1 PRIDE:Q9LJ97 EnsemblPlants:AT3G22490.1
            GeneID:821820 KEGG:ath:AT3G22490 TAIR:At3g22490
            HOGENOM:HOG000239749 InParanoid:Q9LJ97 OMA:KPVAPQD PhylomeDB:Q9LJ97
            ArrayExpress:Q9LJ97 Genevestigator:Q9LJ97 Uniprot:Q9LJ97
        Length = 262

 Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
 Identities = 112/221 (50%), Positives = 139/221 (62%)

Query:     1 MQAAENMALGKTQRGGPAAVMQSAAEANERAGFTSHSTATHIARDQGVTVSESTVADGNR 60
             MQAAE    G TQ+GG AAVMQSAA AN+R GF      T +A ++GVTV+++ V  G R
Sbjct:    39 MQAAETRVFGHTQKGGAAAVMQSAATANKRGGFVHPGDTTDLAAERGVTVAQTDVP-GAR 97

Query:    61 IITEAIGDQVLAQYATPE-VPTRASGAA--LGRD-QS--TIGEALEATALSAGDKAVDQR 114
             + TE +G QV+ QY  P  V T A+  A  +G   QS  TIGEALEAT  +AG+K VDQ 
Sbjct:    98 VTTEFVGGQVVGQYVEPRPVATAAAMEAEVVGLSLQSAITIGEALEATVQTAGNKPVDQS 157

Query:   115 DXXXXXXXXXXXXXTNEIKPGGIGSRAQSAATQNERTTFFSDKITISDVSGDATTKLSDD 174
             D             TN I PGGI + AQSAA  N       DKI + DV   AT KL+ D
Sbjct:   158 DAAAIQAAEVRACGTNVIAPGGIAASAQSAANHNATIDRDEDKIKLIDVLAGATGKLAAD 217

Query:   175 KPVTREDAEGIISPEIRNKPDMRTTPGGVASSMAAAARLNQ 215
             K VTR+DAEG++S E+RN P++ T PGGVA+S+ AAARLN+
Sbjct:   218 KAVTRQDAEGVVSAELRNNPNLSTHPGGVAASITAAARLNE 258


>TAIR|locus:2076996 [details] [associations]
            symbol:ATECP31 "AT3G22500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=ISS] [GO:0016114 "terpenoid biosynthetic
            process" evidence=RCA] Pfam:PF04927 EMBL:CP002686 EMBL:AP000731
            InterPro:IPR007011 EMBL:AY052316 EMBL:BT000845 IPI:IPI00519010
            RefSeq:NP_188889.1 UniGene:At.280 PRIDE:Q9LJ95 ProMEX:Q9LJ95
            EnsemblPlants:AT3G22500.1 GeneID:821821 KEGG:ath:AT3G22500
            TAIR:At3g22500 InParanoid:Q9LJ95 OMA:AATTNIR PhylomeDB:Q9LJ95
            ProtClustDB:CLSN2684142 Genevestigator:Q9LJ95 Uniprot:Q9LJ95
        Length = 256

 Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
 Identities = 99/218 (45%), Positives = 122/218 (55%)

Query:     1 MQAAENMALGKTQRGGPAAVMQSAAEANERAGFTSHSTATHIARDQGVTVSESTVADGNR 60
             MQ+AE    G TQ+GGPAAVMQSAA  N R GF      T +  ++G TV E TV     
Sbjct:    38 MQSAETHVFGHTQKGGPAAVMQSAATTNIRGGFVHPDDKTELVAERGATV-EQTVPAAT- 95

Query:    61 IITEAIGDQVLAQYATPE---VPTRASGAALGRDQSTIGEALEATALSAGDKAVDQRDXX 117
             + TE +G QV+ Q+  P       R    AL +   TIGEALEAT  +AG+K VDQ D  
Sbjct:    96 VTTEFVGGQVVGQHVEPRRVVAAARTDEEAL-QSTITIGEALEATVKTAGNKPVDQSDAA 154

Query:   118 XXXXXXXXXXXTNEIKPGGIGSRAQSAATQNERTTFFSDKITISDVSGDATTKLSDDKPV 177
                        TN I   G+ + AQSAA  N        KI + DV   A  KLS D+ V
Sbjct:   155 AIQAAEMRASGTNVIALAGVAASAQSAADHNATVDRDERKIKLRDVLTGAAGKLSADRAV 214

Query:   178 TREDAEGIISPEIRNKPDMRTTPGGVASSMAAAARLNQ 215
             TREDAEG++S E+RN P + T PGGVA+S+  AARLN+
Sbjct:   215 TREDAEGVVSAEMRNNPKLCTHPGGVAASLTVAARLNE 252


>TAIR|locus:2007529 [details] [associations]
            symbol:RAB28 "responsive to abscisic acid 28"
            species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0007275 "multicellular organismal development"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0006873 "cellular ion homeostasis"
            evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
            [GO:0010226 "response to lithium ion" evidence=IMP] Pfam:PF04927
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005730 GO:GO:0010226
            GO:GO:0009845 GO:GO:0006873 EMBL:AC006550 InterPro:IPR007011
            HOGENOM:HOG000244195 IPI:IPI00539885 PIR:C86162 RefSeq:NP_171811.1
            UniGene:At.42559 PaxDb:Q9SA57 PRIDE:Q9SA57
            EnsemblPlants:AT1G03120.1 GeneID:839571 KEGG:ath:AT1G03120
            TAIR:At1g03120 eggNOG:NOG303957 OMA:DDVARKQ PhylomeDB:Q9SA57
            ProtClustDB:CLSN2913512 Genevestigator:Q9SA57 Uniprot:Q9SA57
        Length = 182

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 72/159 (45%), Positives = 98/159 (61%)

Query:    61 IITEAIGDQVLAQ----YATPEVPTRASGAALGRDQSTIGEALEATALSAGDKAVDQRDX 116
             I+    GD V  +    ++ P+ PT A+  ++  D  TIGEALEATALS GDK VD+RD 
Sbjct:    25 IVFSVSGDDVARKQGDSFSQPD-PTVATMGSV--DTVTIGEALEATALSLGDKPVDRRDA 81

Query:   117 XXXXXXXXXXXXTNEIKPGGIGSRAQSAATQNERTTFFSDKITISDVSGDATTKLSDDKP 176
                          ++ +PGG+   AQ+AAT NE+T    DK+ I+D+  DA  +L  DK 
Sbjct:    82 AAIQAAETRATGESKGRPGGLAVAAQAAATTNEQTVSEEDKVNIADILTDAAERLPGDKV 141

Query:   177 VTREDAEGIISPEIRNKPDMRTTPGGVASSMAAAARLNQ 215
             VT EDAE ++  E+R+  +M+TTPGGVA SM+A ARLNQ
Sbjct:   142 VTSEDAEAVVGAELRSSSEMKTTPGGVADSMSAGARLNQ 180


>TAIR|locus:2143789 [details] [associations]
            symbol:AT5G27980 "AT5G27980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] [GO:0009860 "pollen tube growth"
            evidence=RCA] Pfam:PF04927 EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR007011 EMBL:AK118645 IPI:IPI00541342 RefSeq:NP_198150.1
            UniGene:At.30773 PaxDb:Q8GWT7 PRIDE:Q8GWT7
            EnsemblPlants:AT5G27980.1 GeneID:832868 KEGG:ath:AT5G27980
            TAIR:At5g27980 eggNOG:NOG298104 HOGENOM:HOG000244195 OMA:GRTNIMP
            PhylomeDB:Q8GWT7 ProtClustDB:CLSN2916666 Genevestigator:Q8GWT7
            Uniprot:Q8GWT7
        Length = 192

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 67/160 (41%), Positives = 90/160 (56%)

Query:    61 IITEAIGDQVLAQYATPEV---PTRASGAALGRDQSTIGEALEATALSAGDKAVDQRDXX 117
             ++ EA G+Q   +    +V   P ++ G        TIGEALEA  L+AG+K V+  D  
Sbjct:    39 VVAEASGEQAEGEVNQKKVVANPLKSEGTI------TIGEALEAAVLTAGNKPVEWSDAA 92

Query:   118 XXXXXXXXXXXTNEIKPGGIGSRAQSAATQNERTTFFSDKITISDVSGDATTKLSDDKPV 177
                           I PGG+ + AQSAAT N R      K T++DV   A++KL  DK  
Sbjct:    93 AIQAAEVRATGRTNIMPGGVAASAQSAATLNARIGSDDTKTTLADVLTGASSKLPSDKAA 152

Query:   178 TREDAEGIISPEIRNKPDMRTTPGGVASSMAAAARLNQSK 217
             TR+DAEG+   E+RN P + T P GVA+S+AAAAR+NQSK
Sbjct:   153 TRKDAEGVTGAEMRNDPHLTTYPTGVAASVAAAARINQSK 192


>TAIR|locus:2154252 [details] [associations]
            symbol:AT5G53270 "AT5G53270" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] Pfam:PF04927 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB013388 InterPro:IPR007011
            IPI:IPI00521222 RefSeq:NP_200139.1 UniGene:At.65673
            EnsemblPlants:AT5G53270.1 GeneID:835408 KEGG:ath:AT5G53270
            TAIR:At5g53270 eggNOG:NOG277291 HOGENOM:HOG000152512 OMA:RKPVETT
            PhylomeDB:Q9FK14 ProtClustDB:CLSN2686524 Genevestigator:Q9FK14
            Uniprot:Q9FK14
        Length = 159

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 50/149 (33%), Positives = 78/149 (52%)

Query:    67 GDQVLAQYA-TPEVPTRASGAALGRDQSTIGEALEATALSAGDKAVDQRDXXXXXXXXXX 125
             G  +L QYA T E  + A+ A +GR  +T+ EAL+A A++ G K V+  D          
Sbjct:     4 GFGLLKQYAGTTEQISTAAEALVGRS-TTLTEALKAAAINVGRKPVETTDLAAIKEVEAR 62

Query:   126 XXXTNEIKPGGIGSRAQSAATQNERTTFFSDKITISDVSGDATTKLSDDKPVTREDAEGI 185
                 +    GG+ + A  A  +N++    ++K  + DV  +   K++ D+ VT EDAE +
Sbjct:    63 AIGGDIESDGGVTAVASKAVARNQKIGEDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAV 122

Query:   186 ISPEIRNKPDMRTTPGGVASSMAAAARLN 214
             I  E+ + P     PGGVA S+ AA +LN
Sbjct:   123 IRAELNHSPFNNIIPGGVAESVTAAYKLN 151


>TAIR|locus:2154242 [details] [associations]
            symbol:AT5G53260 "AT5G53260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] Pfam:PF04927 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB013388 InterPro:IPR007011
            HOGENOM:HOG000152512 ProtClustDB:CLSN2686524 IPI:IPI00516866
            RefSeq:NP_200138.1 UniGene:At.55521 PaxDb:Q9FK15
            EnsemblPlants:AT5G53260.1 GeneID:835407 KEGG:ath:AT5G53260
            TAIR:At5g53260 eggNOG:NOG329343 OMA:ISVEEHF PhylomeDB:Q9FK15
            Genevestigator:Q9FK15 Uniprot:Q9FK15
        Length = 176

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 46/139 (33%), Positives = 73/139 (52%)

Query:    76 TPEVPTRASGAALGRDQSTIGEALEATALSAGDKAVDQRDXXXXXXXXXXXXXTNEIKPG 135
             T E+ T A  A +GR  +T+ EAL+A +++ G K V+  D              +    G
Sbjct:    34 TEEISTAAE-ALIGRS-TTLTEALKAASMNVGHKPVETTDVAAIKEVETRAIGGDIESEG 91

Query:   136 GIGSRAQSAATQNERTTFFSDKITISDVSGDATTKLSDDKPVTREDAEGIISPEIRNKPD 195
             G+ + A  A  +N++    ++K  + DV  +   K++ D+ VT EDAE +I  E+ + P 
Sbjct:    92 GVTAVASKAVARNQKIGKDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSPF 151

Query:   196 MRTTPGGVASSMAAAARLN 214
                 PGGVA S+AAA +LN
Sbjct:   152 NNIIPGGVAESVAAAYKLN 170


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.306   0.121   0.319    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      217       204   0.00094  111 3  10 23  0.46    33
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  544 (58 KB)
  Total size of DFA:  168 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.03u 0.11s 25.14t   Elapsed:  00:00:02
  Total cpu time:  25.03u 0.11s 25.14t   Elapsed:  00:00:02
  Start:  Tue May 21 01:41:25 2013   End:  Tue May 21 01:41:27 2013

Back to top