BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027886
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P09444|LEA34_GOSHI Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum PE=4
SV=1
Length = 264
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 153/218 (70%), Gaps = 5/218 (2%)
Query: 1 MQAAENMALGKTQRGGPAAVMQSAAEANERAGFTSHSTATHIARDQGVTVSESTVADGNR 60
MQ AE LG+TQ+GG AAVMQ+AA NE+ G H+ T IA +QGVT++E+ VA G R
Sbjct: 47 MQTAETQVLGQTQKGGTAAVMQAAATRNEQVGVVGHNDITDIAGEQGVTLAETDVA-GRR 105
Query: 61 IITEAIGDQVLAQY--ATPEVPTRASGAALGRDQSTIGEALEATALSAGDKAVDQRDAAA 118
IITEA+ QV+ QY ATP V T G L ++ TIGEALEATA +AGDK VDQ DAAA
Sbjct: 106 IITEAVAGQVVGQYVQATP-VMTSQVGVVL-QNAITIGEALEATAKTAGDKPVDQSDAAA 163
Query: 119 IYAAEARASATNEIKPGGIGSRAQSAATQNERTTFFSDKITISDVSGDATTKLSDDKPVT 178
+ AAE RA+ +N I PGG+ + AQSAA N +KI ++ V AT KL DK VT
Sbjct: 164 VQAAEVRATGSNVIIPGGLAATAQSAAAHNATLDRDEEKIKLNQVLTGATAKLPADKAVT 223
Query: 179 REDAEGIISPEIRNKPDMRTTPGGVASSMAAAARLNQS 216
R+DAEG++S E+RN P++ T PGGVA+SMAAAARLN++
Sbjct: 224 RQDAEGVVSAELRNNPNVATHPGGVAASMAAAARLNEN 261
>sp|Q7SY23|AL4A1_DANRE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial
OS=Danio rerio GN=aldh4a1 PE=2 SV=1
Length = 556
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 60 RIITEAIGDQVLAQYATPE-------------VPTRASGAALGRDQSTIGEALEATALSA 106
+I+ E I VL Y PE P +GA +D+S I EA +A +A
Sbjct: 435 KIMNEEIFGPVLTVYVYPENDYKKVLHLIDNTSPYALTGAIFPQDKSVIEEAGKALRNAA 494
Query: 107 GDKAVDQRDAAAIYAAE----ARASATNEIKPGG 136
G+ ++ + +I A + ARAS TN+ KPGG
Sbjct: 495 GNYYINDKSTGSIVAQQPFGGARASGTND-KPGG 527
>sp|Q9V3X4|BSCL2_DROME Seipin OS=Drosophila melanogaster GN=Seipin PE=2 SV=1
Length = 370
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 115 DAAAIYAAEAR-ASATNEIKPGGIGSRAQSAATQNERTTFFSDKITISDVSGDATTKL-S 172
DA +++ + + A T ++PG I S+A S ++ +SDK I+DV GD + + +
Sbjct: 279 DAKWLHSVQIKYARLTKSLEPGVIHSKASSLRDDDDDLVAYSDKSDIADVGGDTLSDVDA 338
Query: 173 DDKPVTREDAEGII-SPE-IRNKPDMRTT 199
DD + ++ G SP+ +R +P +TT
Sbjct: 339 DDLVLVKKSRSGKRESPDALRKRPTKKTT 367
>sp|Q60821|ZBT17_MOUSE Zinc finger and BTB domain-containing protein 17 OS=Mus musculus
GN=Zbtb17 PE=1 SV=2
Length = 794
Score = 33.1 bits (74), Expect = 1.3, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 87 ALGRDQSTIGEALEATALSAGDK-AVDQRDAAAIYAAEARASATNEIKPG-----GIGSR 140
+L ST GE+ +A+A+ GDK A D++ AA + + +A ++ PG G +
Sbjct: 113 SLAEPSSTTGESADASAVEGGDKRAKDEKAAATMLSRLDQARGSSSTGPGRELKEERGGQ 172
Query: 141 AQSAATQNERT 151
A+SA++ E+T
Sbjct: 173 AESASSGAEQT 183
>sp|A7YWE4|AL4A1_BOVIN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Bos
taurus GN=ALDH4A1 PE=2 SV=1
Length = 563
Score = 32.3 bits (72), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 18/93 (19%)
Query: 61 IITEAIGDQVLAQYATPEVPTR-------------ASGAALGRDQSTIGEALEATALSAG 107
I+ E I VLA Y P+ + +GA +D+ + EA E +AG
Sbjct: 443 IMKEEIFGPVLAVYVYPDEEYKETLRLVDSTTSYGLTGAVFAQDKDVLREATELLRHAAG 502
Query: 108 DKAVDQRDAAAIYAAE----ARASATNEIKPGG 136
+ ++ + ++ + ARAS TN+ KPGG
Sbjct: 503 NFYINDKSTGSVVGQQPFGGARASGTND-KPGG 534
>sp|A4XI31|RPOC_CALS8 DNA-directed RNA polymerase subunit beta' OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rpoC
PE=3 SV=2
Length = 1163
Score = 31.6 bits (70), Expect = 3.9, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 45 DQGVTVSESTVADGNRIITEAIGDQVLAQYATPEVPTRASGAALGRDQSTIGEALEATAL 104
++G+ VSE + DG +I E + ++++ +YA ++ +G + + I E + +
Sbjct: 797 EKGIEVSE--IRDGTEVI-ETLEERIIGRYAAKDIINEKTGEVIVKRNELITEEIAKKIV 853
Query: 105 SAGDKAVDQR 114
AG+K+V R
Sbjct: 854 DAGEKSVYVR 863
>sp|O86033|GLPK_RHIME Glycerol kinase OS=Rhizobium meliloti (strain 1021) GN=glpK PE=1
SV=2
Length = 497
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 42 IARDQGVTVSESTVADGNRIITEAIGDQVLAQYATPEVPTRASGAALGRD-QSTIGEALE 100
+A DQG T + + V DGN+ I +G + Q+ + + ST+ EA+E
Sbjct: 6 LAIDQGTTSTRAIVFDGNQKIA-GVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIE 64
Query: 101 ATALSAGDKA----VDQRDAAAIYAAEARASATNEIKPGGIGSRAQSAATQNERTTFFSD 156
+ ++A D A +QR+ ++ E N I Q+ RT F D
Sbjct: 65 KSGITANDIAAIGITNQRETVVVWDRETGKPIHNAI------------VWQDRRTAAFCD 112
Query: 157 KI 158
K+
Sbjct: 113 KL 114
>sp|Q47SC6|DNLJ_THEFY DNA ligase OS=Thermobifida fusca (strain YX) GN=ligA PE=3 SV=1
Length = 745
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 19/123 (15%)
Query: 8 ALGKTQRGGPAAVMQSAAEANERAGFTSHSTATHIARDQGVTVSESTVA-DGNRIITEAI 66
++G+T R P AV++ A F + A +AR +GV + ++ V II E +
Sbjct: 353 SVGRTGRVTPYAVLEPVKVAGSEVEFATLHNAQEVAR-KGVLIGDTVVVRKAGDIIPEVV 411
Query: 67 GDQVLAQYAT--PEV-PTRA--SGAALGRDQS------------TIGEALEATALSAGDK 109
G V + T P V PT G+ LG+ + G+ E A AG K
Sbjct: 412 GPVVEKRTGTERPFVMPTECPECGSPLGQQKEGDVDLRCPNTRYCKGQLRERLAFIAGRK 471
Query: 110 AVD 112
A+D
Sbjct: 472 ALD 474
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.120 0.315
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,585,780
Number of Sequences: 539616
Number of extensions: 2521791
Number of successful extensions: 8151
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 7972
Number of HSP's gapped (non-prelim): 252
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 59 (27.3 bits)