Query 027891
Match_columns 217
No_of_seqs 181 out of 313
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 04:06:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/027891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hx0_A Putative DNA-binding pr 99.5 7.6E-14 2.6E-18 113.6 8.5 67 149-216 13-80 (154)
2 2p6y_A Hypothetical protein VC 99.5 7.4E-14 2.5E-18 112.2 8.0 62 154-216 2-64 (142)
3 2dt4_A Hypothetical protein PH 99.3 2E-12 6.7E-17 103.6 4.8 62 155-216 10-74 (143)
4 2h6l_A Hypothetical protein; N 99.3 2.7E-12 9.1E-17 103.1 5.1 61 155-216 10-74 (146)
5 3htn_A Putative DNA binding pr 99.1 3.3E-11 1.1E-15 97.6 5.5 62 155-216 16-80 (149)
6 3hwu_A Putative DNA-binding pr 98.4 6.7E-07 2.3E-11 72.0 6.6 61 155-216 13-76 (147)
7 2ezd_A High mobility group pro 96.8 0.00048 1.6E-08 41.7 2.0 17 121-137 2-18 (26)
8 4i95_A Putative uncharacterize 87.8 0.59 2E-05 38.2 4.5 35 180-216 36-70 (142)
9 4gzv_A Hypothetical protein; A 76.1 3.1 0.00011 34.0 4.5 36 180-217 36-71 (142)
10 4dyq_A Gene 1 protein; GP1, oc 68.3 1.5 5.2E-05 34.1 0.9 14 88-101 3-16 (140)
11 1t3g_A X-linked interleukin-1 62.6 5.2 0.00018 31.7 3.1 29 160-188 50-78 (159)
12 1fyx_A TOLL-like receptor 2; b 47.8 9.4 0.00032 29.7 2.2 29 160-188 43-71 (149)
13 2j67_A TOLL like receptor 10; 47.6 9.6 0.00033 30.9 2.3 29 160-188 73-101 (178)
14 4gqw_A CBS domain-containing p 37.5 31 0.0011 24.6 3.6 40 153-192 90-129 (152)
15 4esy_A CBS domain containing m 37.3 21 0.00071 26.9 2.7 40 152-191 22-61 (170)
16 3j0a_A TOLL-like receptor 5; m 32.1 29 0.00099 33.2 3.3 32 157-188 708-739 (844)
17 3h16_A TIR protein; bacteria T 30.4 32 0.0011 26.5 2.7 29 160-188 56-84 (154)
18 3sl7_A CBS domain-containing p 30.2 42 0.0014 24.8 3.3 41 152-192 102-142 (180)
19 2rih_A Conserved protein with 30.1 43 0.0015 24.0 3.3 40 150-189 7-46 (141)
20 3k2v_A Putative D-arabinose 5- 27.3 44 0.0015 24.3 2.9 42 149-190 29-72 (149)
21 2jlp_A Extracellular superoxid 26.6 82 0.0028 26.9 4.9 46 166-212 26-81 (222)
22 3fio_A A cystathionine beta-sy 26.5 1.2E+02 0.0041 18.9 5.0 32 158-190 2-33 (70)
23 3kpb_A Uncharacterized protein 25.8 55 0.0019 22.5 3.1 38 154-191 7-44 (122)
24 3nqr_A Magnesium and cobalt ef 25.7 71 0.0024 22.5 3.8 37 154-191 75-111 (127)
25 3i8n_A Uncharacterized protein 25.0 79 0.0027 22.3 3.9 37 154-191 78-114 (130)
26 3lfr_A Putative metal ION tran 25.0 90 0.0031 22.3 4.3 39 152-191 74-112 (136)
27 1o50_A CBS domain-containing p 24.9 69 0.0024 23.4 3.7 38 153-191 101-138 (157)
28 1pbj_A Hypothetical protein; s 24.1 80 0.0027 21.7 3.7 36 154-190 7-42 (125)
29 3jtf_A Magnesium and cobalt ef 23.2 76 0.0026 22.5 3.5 36 154-190 75-110 (129)
30 2yzi_A Hypothetical protein PH 23.2 87 0.003 22.0 3.8 40 150-189 9-48 (138)
31 3ghd_A A cystathionine beta-sy 22.6 1.8E+02 0.006 19.4 5.5 38 158-195 2-39 (70)
32 3fcg_A F1 capsule-anchoring pr 22.6 72 0.0025 23.7 3.3 20 191-214 26-50 (90)
33 3k2v_A Putative D-arabinose 5- 22.1 79 0.0027 22.9 3.5 36 153-188 100-135 (149)
34 2o16_A Acetoin utilization pro 21.8 1.4E+02 0.0047 22.0 4.8 37 154-191 84-120 (160)
35 4esy_A CBS domain containing m 21.3 54 0.0019 24.5 2.5 39 152-191 109-147 (170)
No 1
>2hx0_A Putative DNA-binding protein; NESG, PSI-2, SCR59, structural genomics, protein structure initiative; 1.55A {Salmonella choleraesuis} SCOP: d.290.1.3 PDB: 2nmu_A
Probab=99.48 E-value=7.6e-14 Score=113.64 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=61.5
Q ss_pred CCCCCceeEEEEecCCccHHHHHHHHhhcCC-ceEEEecccCeeeeEEeeCCCCCCCceeEeeeeeeec
Q 027891 149 SAGMGFTPHVITVAVGEDIAMKLLSFSQQGP-RAICVLSANGAISTATLRQPSSSGGSVTYECPFLEVY 216 (217)
Q Consensus 149 s~g~~f~pHVI~V~~GEDV~~kI~~Faqq~~-raiCILSasGsVSnVTLRqp~ssg~tvtyeGrFEILS 216 (217)
+..+.+++|+|+|.+||||.++|.+||++.. ++.|||++.|+|++|+||+++... +++|+|+|||||
T Consensus 13 ~~~~~~r~~vlrL~~Gedl~~~i~~~~~~~gi~~a~v~s~iGsl~~~~l~~~~~~~-~~~~~g~~EIls 80 (154)
T 2hx0_A 13 HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEA-TTSLTGTFEVIS 80 (154)
T ss_dssp CSCCCCEEEEEEECTTCBHHHHHHHHHHHHTCSSEEEEEEEEEEEEEEEECTTCSS-CEEEEEEEEEEE
T ss_pred CCCCCccEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEeeeEEeEEEccCCCc-cEecCCcEEEEE
Confidence 4567899999999999999999999998777 799999999999999999998844 789999999987
No 2
>2p6y_A Hypothetical protein VCA0587; NESG, Q9KM02_vibch, VCR80, structural genomics, PSI-2, prote structure initiative; 1.63A {Vibrio cholerae}
Probab=99.48 E-value=7.4e-14 Score=112.22 Aligned_cols=62 Identities=21% Similarity=0.296 Sum_probs=58.2
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCC-ceEEEecccCeeeeEEeeCCCCCCCceeEeeeeeeec
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGP-RAICVLSANGAISTATLRQPSSSGGSVTYECPFLEVY 216 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~-raiCILSasGsVSnVTLRqp~ssg~tvtyeGrFEILS 216 (217)
|++|+|+|.+||||.++|.+||++.. ++.||+++.|+|++|+||+++.. .+++|+|+|||||
T Consensus 2 ~r~~~lrL~~Gedl~~~i~~~~~~~~i~~a~v~~~iGsl~~~~l~~~~~~-~~~~~~g~~EIls 64 (142)
T 2p6y_A 2 IHLIALRLTRGMDLKQQIVQLVQQHRIHAGSIASCVGCLSTLHIRLADSV-STLQVSAPFEILS 64 (142)
T ss_dssp CEEEEEEECTTCBHHHHHHHHHHHTTCSSEEEEEEEEEEEEEEEECTTSS-CEEEECSCEEEEE
T ss_pred CcEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEEEEEeEEEECCCCC-ccEecCCcEEEEE
Confidence 78999999999999999999999887 79999999999999999999984 4789999999986
No 3
>2dt4_A Hypothetical protein PH0802; PPC domain, structural genomics, unknown function; 1.60A {Pyrococcus horikoshii}
Probab=99.28 E-value=2e-12 Score=103.56 Aligned_cols=62 Identities=8% Similarity=0.169 Sum_probs=53.9
Q ss_pred eeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeeeeEEeeCCCCCC---CceeEeeeeeeec
Q 027891 155 TPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAISTATLRQPSSSG---GSVTYECPFLEVY 216 (217)
Q Consensus 155 ~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVSnVTLRqp~ssg---~tvtyeGrFEILS 216 (217)
++|+|+|.+||||.++|.+||++.....|++++.|+|++|+||+++... ..++++|+|||||
T Consensus 10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~~~~~~~~g~~EIls 74 (143)
T 2dt4_A 10 RTYLFRVPEGEELLTYIKNFCKKEGIETAIINGIGTLKNPKIGYFLEEKKEYKVIPLKGSYELIS 74 (143)
T ss_dssp EEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEEETTTTEEEEEECCSEEEEEE
T ss_pred CEEEEEECCCCcHHHHHHHHHHHcCCCEEEEEEEEEEEEEEEEeecCccCcceeEeecCCEEEEE
Confidence 6999999999999999999999988544445999999999999987643 2688999999986
No 4
>2h6l_A Hypothetical protein; NESG GR103, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Archaeoglobus fulgidus} SCOP: d.290.1.3
Probab=99.27 E-value=2.7e-12 Score=103.12 Aligned_cols=61 Identities=16% Similarity=0.202 Sum_probs=54.6
Q ss_pred eeEEEEecCCccHHHHHHHHhhcCC-ceEEEecccCeeeeEEeeCCCCCC---CceeEeeeeeeec
Q 027891 155 TPHVITVAVGEDIAMKLLSFSQQGP-RAICVLSANGAISTATLRQPSSSG---GSVTYECPFLEVY 216 (217)
Q Consensus 155 ~pHVI~V~~GEDV~~kI~~Faqq~~-raiCILSasGsVSnVTLRqp~ssg---~tvtyeGrFEILS 216 (217)
++|+|+|.+||||.++|.+||++.. ++.|| ++.|+|++|+||+++... .+++++|+|||||
T Consensus 10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~v-s~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EIls 74 (146)
T 2h6l_A 10 KGFLLRLDYGKDLVRQIEEFLEEKGIHAAHI-SAIGAVRSAVIGYYDQEKKEYVKKELMEPLEILS 74 (146)
T ss_dssp EEEEEECCTTSBHHHHHHHHHHHHTCCSEEE-EEEEEEEEEEEEEEETTTTEEEEEEECSCEEEEE
T ss_pred CEEEEEECCCCCHHHHHHHHHHHcCCCEEEE-EEEEEEEEEEEECCCCCCcceeEEEecCcEEEEE
Confidence 6999999999999999999999887 56666 999999999999987754 2689999999986
No 5
>3htn_A Putative DNA binding protein; DUF269 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE 1PE; 1.50A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.290.1.0
Probab=99.15 E-value=3.3e-11 Score=97.58 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=54.3
Q ss_pred eeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeeeeEEeeCCCCCC---CceeEeeeeeeec
Q 027891 155 TPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAISTATLRQPSSSG---GSVTYECPFLEVY 216 (217)
Q Consensus 155 ~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVSnVTLRqp~ssg---~tvtyeGrFEILS 216 (217)
+.++|+|.+||||.++|.+||++.....|++++.|++++|+||+++... ..++++|+|||||
T Consensus 16 r~~~lrl~~Gedl~~~l~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EI~s 80 (149)
T 3htn_A 16 NKYIVSINNHTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISN 80 (149)
T ss_dssp TEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEECTTTCCEEEEEECSCEEEEE
T ss_pred CEEEEEECCCChHHHHHHHHHHHcCCcEEEEEEEEEeeeEEEEccCCCcccceeEEecCceEEEE
Confidence 7899999999999999999999999655555999999999999976522 2689999999997
No 6
>3hwu_A Putative DNA-binding protein; YP_299413.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.30A {Ralstonia eutropha}
Probab=98.35 E-value=6.7e-07 Score=71.99 Aligned_cols=61 Identities=15% Similarity=0.131 Sum_probs=50.1
Q ss_pred eeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeeeeEEeeCCCCCC---CceeEeeeeeeec
Q 027891 155 TPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAISTATLRQPSSSG---GSVTYECPFLEVY 216 (217)
Q Consensus 155 ~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVSnVTLRqp~ssg---~tvtyeGrFEILS 216 (217)
+-+++++.+||||.++|..||++..-..+++++.|++++++|+..+... ...+++ +|||+|
T Consensus 13 ~~~~~rL~~Gedl~~~l~~~~~~~~i~~a~v~~iGsl~~~~l~~~~~~~~~y~~~~~~-~~Ei~s 76 (147)
T 3hwu_A 13 TGYLMVLRHGDNVLQNLEQLARDEHIPSASFVGIGFMSEATFGFYDFGRKQFDPKTYR-NVEMAN 76 (147)
T ss_dssp TEEEEEEETTCBHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEEEETTTTEEEEEEEE-EEEEEE
T ss_pred CEEEEEECCCChHHHHHHHHHHHcCCCEEEEEEEecccEEEEEeecCCcCccccEEec-CcEEEE
Confidence 3489999999999999999999999544455999999999999765422 146788 899997
No 7
>2ezd_A High mobility group protein HMG-I/HMG-Y; DNA binding protein, minor groove DNA binding, transcriptional CO-activator, architectural factor; HET: DNA; NMR {Homo sapiens} SCOP: j.10.1.1 PDB: 2eze_A*
Probab=96.85 E-value=0.00048 Score=41.65 Aligned_cols=17 Identities=59% Similarity=0.954 Sum_probs=14.9
Q ss_pred CcCcCCCCCCCCCCCCc
Q 027891 121 PTQKRGRGRPPGTGRKQ 137 (217)
Q Consensus 121 ~~~KR~RGRP~GS~nK~ 137 (217)
+..||+||||.|||||.
T Consensus 2 ptpKrpRgRpkGSKNk~ 18 (26)
T 2ezd_A 2 PTPKRPRGRPKGSKNKG 18 (26)
T ss_dssp CSCCCCSSCCTTCCCCS
T ss_pred CCCcCCCCCcCcccccC
Confidence 34799999999999995
No 8
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=87.80 E-value=0.59 Score=38.21 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=30.7
Q ss_pred ceEEEecccCeeeeEEeeCCCCCCCceeEeeeeeeec
Q 027891 180 RAICVLSANGAISTATLRQPSSSGGSVTYECPFLEVY 216 (217)
Q Consensus 180 raiCILSasGsVSnVTLRqp~ssg~tvtyeGrFEILS 216 (217)
...=|||.-|+..|++++. + ++.++|.+|-|||.|
T Consensus 36 n~lKIlSdDgtF~Ni~m~~-~-~~aiIt~~GtY~~~S 70 (142)
T 4i95_A 36 NTFKVLSDDGRIVNFTIRP-G-TDAIITGYGTYRQIS 70 (142)
T ss_dssp EEEEEECTTSEEEEEECCT-T-SCCEEEEEEEEEEEE
T ss_pred ccEEEEcCCCcEEEEEEec-C-CCcEEEEeEEEEecC
Confidence 3677999999999999993 3 588999999999987
No 9
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=76.13 E-value=3.1 Score=33.95 Aligned_cols=36 Identities=19% Similarity=0.192 Sum_probs=30.7
Q ss_pred ceEEEecccCeeeeEEeeCCCCCCCceeEeeeeeeecC
Q 027891 180 RAICVLSANGAISTATLRQPSSSGGSVTYECPFLEVYG 217 (217)
Q Consensus 180 raiCILSasGsVSnVTLRqp~ssg~tvtyeGrFEILS~ 217 (217)
...=|||.-|+..|+++... ++.++|..|-||+.|.
T Consensus 36 ~~~KIlS~DgtF~N~~m~~~--~~aiIt~yGtY~l~SD 71 (142)
T 4gzv_A 36 NTFKVLSDDGRIVNFTIIPG--ADAIITGYGTYKQLTD 71 (142)
T ss_dssp EEEEEECTTSEEEEEECCTT--SCCEEEEEEEEEEEET
T ss_pred CceEEECCCCcEEEEEEeCC--CCcEEEEeEEEEecCC
Confidence 46789999999999999664 2679999999999873
No 10
>4dyq_A Gene 1 protein; GP1, octamer, DNA-binding, viral protein; 1.50A {Shigella phage SF6} PDB: 4dyc_A 4dyr_A 3hef_A 4dzj_A 4dzp_A
Probab=68.28 E-value=1.5 Score=34.10 Aligned_cols=14 Identities=43% Similarity=0.873 Sum_probs=6.2
Q ss_pred cccCCCCCCCCCCC
Q 027891 88 VKRKRGRPRKYGPD 101 (217)
Q Consensus 88 ~KkKRGRPRKY~~d 101 (217)
.|+|+|||.||-+.
T Consensus 3 ~~~k~GRPtk~t~e 16 (140)
T 4dyq_A 3 TEPKAGRPSDYMPE 16 (140)
T ss_dssp -------CCSCCTT
T ss_pred CCCCCCCCCCCCHH
Confidence 37999999999876
No 11
>1t3g_A X-linked interleukin-1 receptor accessory protein-like 1; TIR, IL-1RAPL, IL-1R, TLR, membrane protein; 2.30A {Homo sapiens}
Probab=62.64 E-value=5.2 Score=31.70 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=26.0
Q ss_pred EecCCccHHHHHHHHhhcCCceEEEeccc
Q 027891 160 TVAVGEDIAMKLLSFSQQGPRAICVLSAN 188 (217)
Q Consensus 160 ~V~~GEDV~~kI~~Faqq~~raiCILSas 188 (217)
.+.+|++|.+.|....++..+.|+|||.+
T Consensus 50 D~~~G~~i~~~i~~~I~~Sr~~IvVlS~~ 78 (159)
T 1t3g_A 50 DLIPTGTYIEDVARCVDQSKRLIIVMTPN 78 (159)
T ss_dssp HCCCCTTHHHHHHHHHHTBSEEEEEECHH
T ss_pred cccCccchHHHHHHHHHHcCEEEEEEccc
Confidence 36799999999999999999999999854
No 12
>1fyx_A TOLL-like receptor 2; beta-alpha-beta fold, signaling protein; 2.80A {Homo sapiens} SCOP: c.23.2.1 PDB: 1fyw_A 1o77_A
Probab=47.76 E-value=9.4 Score=29.68 Aligned_cols=29 Identities=21% Similarity=0.276 Sum_probs=26.2
Q ss_pred EecCCccHHHHHHHHhhcCCceEEEeccc
Q 027891 160 TVAVGEDIAMKLLSFSQQGPRAICVLSAN 188 (217)
Q Consensus 160 ~V~~GEDV~~kI~~Faqq~~raiCILSas 188 (217)
.+.+|+++.+.|....++..+.|+|||.+
T Consensus 43 d~~~G~~~~~~i~~~i~~Sr~~I~VlS~~ 71 (149)
T 1fyx_A 43 DFIHGKWIIDNIIDSIEKSHKTVFVLSEN 71 (149)
T ss_dssp HCCSSSCHHHHHHHHHHHEEEEEEEECHH
T ss_pred cCCCchhHHHHHHHHHHHcCEEEEEeCcc
Confidence 47899999999999999999999999864
No 13
>2j67_A TOLL like receptor 10; TIR, IL-1, TLR10, membrane, innate immunity, immune response, leucine-rich repeat, glycoprotein, transmembrane; 2.20A {Homo sapiens} PDB: 1fyv_A
Probab=47.61 E-value=9.6 Score=30.88 Aligned_cols=29 Identities=31% Similarity=0.478 Sum_probs=26.1
Q ss_pred EecCCccHHHHHHHHhhcCCceEEEeccc
Q 027891 160 TVAVGEDIAMKLLSFSQQGPRAICVLSAN 188 (217)
Q Consensus 160 ~V~~GEDV~~kI~~Faqq~~raiCILSas 188 (217)
.+.+|+++.+.|....++..+.|+|||.+
T Consensus 73 D~~~G~~i~~~i~~aI~~Sr~~IvVlS~~ 101 (178)
T 2j67_A 73 YFDPGKSISENIVSFIEKSYKSIFVLSPN 101 (178)
T ss_dssp HCCTTSCHHHHHHHHHHTEEEEEEEECHH
T ss_pred cCCCCccHHHHHHHHHHhCCEEEEEeccc
Confidence 47799999999999999988999999864
No 14
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=37.51 E-value=31 Score=24.57 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=33.3
Q ss_pred CceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeee
Q 027891 153 GFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAIS 192 (217)
Q Consensus 153 ~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVS 192 (217)
-|++.++.|.+.+++.+.+..|.+++-+.++|+...|.+.
T Consensus 90 ~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~ 129 (152)
T 4gqw_A 90 LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLV 129 (152)
T ss_dssp HSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEE
T ss_pred hcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEE
Confidence 3566778899999999999889888888999998777554
No 15
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=37.33 E-value=21 Score=26.90 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=34.7
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
.-|+..+++|.+.+.|.+.+..+.+++-.++.|+...|.+
T Consensus 22 diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~l 61 (170)
T 4esy_A 22 DILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHL 61 (170)
T ss_dssp GGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCE
T ss_pred HhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccE
Confidence 4477889999999999999988998888999999888654
No 16
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=32.08 E-value=29 Score=33.24 Aligned_cols=32 Identities=13% Similarity=0.229 Sum_probs=27.9
Q ss_pred EEEEecCCccHHHHHHHHhhcCCceEEEeccc
Q 027891 157 HVITVAVGEDIAMKLLSFSQQGPRAICVLSAN 188 (217)
Q Consensus 157 HVI~V~~GEDV~~kI~~Faqq~~raiCILSas 188 (217)
|-=.+.+|++|++.|.+-.++..+.|||||-+
T Consensus 708 ~~rd~~~G~~~~~~i~~~i~~sr~~i~vls~~ 739 (844)
T 3j0a_A 708 EERDFVPGENRIANIQDAIWNSRKIVCLVSRH 739 (844)
T ss_dssp SSSSCCSSSCHHHHHHHHHHHSSEEEEEECTT
T ss_pred EccccCCCchHHHHHHHHHHHhCeEEEEeccc
Confidence 33457899999999999999999999999875
No 17
>3h16_A TIR protein; bacteria TIR domain, signaling protein; 2.50A {Paracoccus denitrificans PD1222}
Probab=30.45 E-value=32 Score=26.51 Aligned_cols=29 Identities=17% Similarity=0.166 Sum_probs=25.7
Q ss_pred EecCCccHHHHHHHHhhcCCceEEEeccc
Q 027891 160 TVAVGEDIAMKLLSFSQQGPRAICVLSAN 188 (217)
Q Consensus 160 ~V~~GEDV~~kI~~Faqq~~raiCILSas 188 (217)
++.+|+++.+.|..-.++....|+|+|-+
T Consensus 56 ~l~~G~~~~~~i~~ai~~s~~~i~v~S~~ 84 (154)
T 3h16_A 56 SLRPGDSLRRSIDKGLGSSRFGIVVLSTH 84 (154)
T ss_dssp EECTTCCHHHHHHHHHTSEEEEEEEEEHH
T ss_pred hCCCccHHHHHHHHHHHhCcEEEEEeCcc
Confidence 57899999999999888888899999865
No 18
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=30.21 E-value=42 Score=24.78 Aligned_cols=41 Identities=17% Similarity=0.160 Sum_probs=33.9
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAIS 192 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVS 192 (217)
.-|++.++.|.+.+++.+.+..|.+.+-+.++|+...|.+.
T Consensus 102 ~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~v 142 (180)
T 3sl7_A 102 DLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLI 142 (180)
T ss_dssp HHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEE
T ss_pred HHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEE
Confidence 34677788999999999999888888889999998776544
No 19
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=30.08 E-value=43 Score=23.98 Aligned_cols=40 Identities=3% Similarity=-0.021 Sum_probs=33.3
Q ss_pred CCCCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccC
Q 027891 150 AGMGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANG 189 (217)
Q Consensus 150 ~g~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasG 189 (217)
++.-|++.++.|.+.+.+.+.+..|.+.+...+.|+...|
T Consensus 7 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~ 46 (141)
T 2rih_A 7 TSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDN 46 (141)
T ss_dssp GGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTE
T ss_pred HHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCC
Confidence 3455777889999999999999888888888999998765
No 20
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=27.34 E-value=44 Score=24.34 Aligned_cols=42 Identities=7% Similarity=0.070 Sum_probs=35.4
Q ss_pred CCCCCcee--EEEEecCCccHHHHHHHHhhcCCceEEEecccCe
Q 027891 149 SAGMGFTP--HVITVAVGEDIAMKLLSFSQQGPRAICVLSANGA 190 (217)
Q Consensus 149 s~g~~f~p--HVI~V~~GEDV~~kI~~Faqq~~raiCILSasGs 190 (217)
.+..-|++ .++.|.+.+.+.+.+..+.+.+...+.|+...|.
T Consensus 29 ~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~ 72 (149)
T 3k2v_A 29 RVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMN 72 (149)
T ss_dssp BGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCB
T ss_pred CHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCc
Confidence 45566888 8899999999999998898888899999987654
No 21
>2jlp_A Extracellular superoxide dismutase (Cu-Zn); glycolisation, oxidoreductase, heparin binding, heparin-BIND oxidative stress, antioxidant; 1.70A {Homo sapiens}
Probab=26.65 E-value=82 Score=26.93 Aligned_cols=46 Identities=11% Similarity=0.172 Sum_probs=21.5
Q ss_pred cHHHHHHHHhhcCC--ceEEEeccc--------CeeeeEEeeCCCCCCCceeEeeee
Q 027891 166 DIAMKLLSFSQQGP--RAICVLSAN--------GAISTATLRQPSSSGGSVTYECPF 212 (217)
Q Consensus 166 DV~~kI~~Faqq~~--raiCILSas--------GsVSnVTLRqp~ssg~tvtyeGrF 212 (217)
||..+|..+.--.. .|+|||..+ ...-.|++.|... ++.+.+++.+
T Consensus 26 ~~~~~l~~~~~~~~~~~Avc~l~~~a~~~~~~~~v~G~V~f~q~~~-~~~v~v~~~l 81 (222)
T 2jlp_A 26 EIWQEVMQRRDDDGTLHAACQVQPSATLDAAQPRVTGVVLFRQLAP-RAKLDAFFAL 81 (222)
T ss_dssp ------------CCCEEEEEEEEECTTCCTTSCCCEEEEEEEESST-TSCEEEEEEE
T ss_pred HHHHHHhcccccccceEEEEEeeccccccCCCCCcEEEEEEEEeCC-CCeEEEEEEE
Confidence 44455554442222 799999743 3678899999654 3334554443
No 22
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=26.46 E-value=1.2e+02 Score=18.86 Aligned_cols=32 Identities=13% Similarity=0.141 Sum_probs=27.0
Q ss_pred EEEecCCccHHHHHHHHhhcCCceEEEecccCe
Q 027891 158 VITVAVGEDIAMKLLSFSQQGPRAICVLSANGA 190 (217)
Q Consensus 158 VI~V~~GEDV~~kI~~Faqq~~raiCILSasGs 190 (217)
+++|.+.+.+.+.+..+.+++...+.|+.. |.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~ 33 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DE 33 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TE
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CE
Confidence 578999999999998888888888999887 53
No 23
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=25.84 E-value=55 Score=22.52 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=31.5
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
|++.++.|.+.+.+.+.+..|.+.+...+.|+...|.+
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~ 44 (122)
T 3kpb_A 7 LSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKL 44 (122)
T ss_dssp CCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBE
T ss_pred hCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCE
Confidence 55668889999999999988888888899999876643
No 24
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=25.70 E-value=71 Score=22.49 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=30.3
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
|++ ++.|.+.+++.+.+..|.+.+-+.+.|+...|.+
T Consensus 75 m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~ 111 (127)
T 3nqr_A 75 LRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGV 111 (127)
T ss_dssp CBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCE
T ss_pred cCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCE
Confidence 445 5789999999999988988888899999877644
No 25
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=24.97 E-value=79 Score=22.33 Aligned_cols=37 Identities=11% Similarity=0.174 Sum_probs=30.9
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
|++ ++.|.+.+++.+.+..|.+++-+.+.|+...|.+
T Consensus 78 m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~ 114 (130)
T 3i8n_A 78 MRP-IQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTV 114 (130)
T ss_dssp SEE-CCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCE
T ss_pred hcC-CcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCE
Confidence 455 6899999999999989999888899999876643
No 26
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=24.96 E-value=90 Score=22.34 Aligned_cols=39 Identities=15% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
.-|++ ++.|.+.+++.+.+..|.+.+-+.+.|+...|.+
T Consensus 74 ~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~l 112 (136)
T 3lfr_A 74 KLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGV 112 (136)
T ss_dssp GTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCE
T ss_pred HHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCE
Confidence 34667 8999999999999999999888899999876543
No 27
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=24.92 E-value=69 Score=23.44 Aligned_cols=38 Identities=13% Similarity=0.137 Sum_probs=32.3
Q ss_pred CceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 153 GFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 153 ~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
-|++ ++.|.+.+++.+.+..|.+.+-+.+.|+...|.+
T Consensus 101 im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~ 138 (157)
T 1o50_A 101 IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEI 138 (157)
T ss_dssp HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCE
T ss_pred HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEE
Confidence 3667 8999999999999989999988899999866644
No 28
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=24.12 E-value=80 Score=21.69 Aligned_cols=36 Identities=14% Similarity=0.260 Sum_probs=29.9
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCe
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGA 190 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGs 190 (217)
|++.++.|.+.+.+.+.+..+.+.+...+.|+. .|.
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~ 42 (125)
T 1pbj_A 7 MVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGV 42 (125)
T ss_dssp CBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTE
T ss_pred cCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCe
Confidence 566788899999999999888888888899987 553
No 29
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=23.20 E-value=76 Score=22.45 Aligned_cols=36 Identities=14% Similarity=0.270 Sum_probs=29.3
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCe
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGA 190 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGs 190 (217)
|++ ++.|.+.+++.+.+..|.+.+-+.+.|+...|.
T Consensus 75 m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~ 110 (129)
T 3jtf_A 75 VRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGG 110 (129)
T ss_dssp CBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CC
T ss_pred hCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCC
Confidence 455 789999999999998888888888999987654
No 30
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=23.19 E-value=87 Score=22.04 Aligned_cols=40 Identities=10% Similarity=0.131 Sum_probs=33.0
Q ss_pred CCCCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccC
Q 027891 150 AGMGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANG 189 (217)
Q Consensus 150 ~g~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasG 189 (217)
++.-|+..++.|.+.+.+.+.+..|.+.+...+.|+...|
T Consensus 9 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~ 48 (138)
T 2yzi_A 9 IKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDG 48 (138)
T ss_dssp GGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCC
Confidence 3455777899999999999999888888888999998554
No 31
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=22.61 E-value=1.8e+02 Score=19.41 Aligned_cols=38 Identities=13% Similarity=0.174 Sum_probs=29.9
Q ss_pred EEEecCCccHHHHHHHHhhcCCceEEEecccCeeeeEE
Q 027891 158 VITVAVGEDIAMKLLSFSQQGPRAICVLSANGAISTAT 195 (217)
Q Consensus 158 VI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVSnVT 195 (217)
+|+|.+.+-|.+.+..+.+++-.++.|....-.|--+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT 39 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVT 39 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEE
Confidence 68999999999999889998888999987532333333
No 32
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=22.59 E-value=72 Score=23.67 Aligned_cols=20 Identities=15% Similarity=0.170 Sum_probs=14.3
Q ss_pred eeeEEeeCCCCCCCceeEe-----eeeee
Q 027891 191 ISTATLRQPSSSGGSVTYE-----CPFLE 214 (217)
Q Consensus 191 VSnVTLRqp~ssg~tvtye-----GrFEI 214 (217)
=+.|+|+|- +.+.|+ |+|||
T Consensus 26 ~A~V~v~qn----G~~iy~~~VppGpF~I 50 (90)
T 3fcg_A 26 QARVEVLRD----GYTVSNELVPSGPFEL 50 (90)
T ss_dssp SEEEEEESS----SCEEEEEEECSEEEEE
T ss_pred CcEEEEEEC----CEEEEEeEeCCCCeEE
Confidence 467999993 555554 88887
No 33
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=22.11 E-value=79 Score=22.90 Aligned_cols=36 Identities=14% Similarity=0.038 Sum_probs=30.5
Q ss_pred CceeEEEEecCCccHHHHHHHHhhcCCceEEEeccc
Q 027891 153 GFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSAN 188 (217)
Q Consensus 153 ~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSas 188 (217)
-|++.++.|.+.+++.+.+..|.+++-+.+.|+...
T Consensus 100 ~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 135 (149)
T 3k2v_A 100 VMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGD 135 (149)
T ss_dssp HSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT
T ss_pred HcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC
Confidence 356778999999999999988998888889998754
No 34
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=21.76 E-value=1.4e+02 Score=21.98 Aligned_cols=37 Identities=11% Similarity=0.167 Sum_probs=31.2
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
|++-++.|.+.+++.+.+..|.+.+-+.++|+.. |.+
T Consensus 84 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~l 120 (160)
T 2o16_A 84 MHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVL 120 (160)
T ss_dssp SCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEE
T ss_pred hcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEE
Confidence 5567899999999999998898888888999987 644
No 35
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=21.30 E-value=54 Score=24.53 Aligned_cols=39 Identities=21% Similarity=0.230 Sum_probs=33.0
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
.-|+..+++|.+.+++.+.+..|.+++-+.+.|+- .|.+
T Consensus 109 ~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~l 147 (170)
T 4esy_A 109 AVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVP 147 (170)
T ss_dssp HHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEE
T ss_pred hhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEE
Confidence 44778899999999999999999999989999997 4543
Done!