Query 027891
Match_columns 217
No_of_seqs 181 out of 313
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 04:06:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/027891.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/027891hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hx0a1 d.290.1.3 (A:6-141) Hy 99.3 6.5E-12 4.7E-16 98.5 8.4 65 151-216 3-68 (136)
2 d2h6la1 d.290.1.3 (A:1-138) Hy 98.9 2.8E-10 2.1E-14 88.3 5.0 62 155-216 10-74 (138)
3 d3ddja2 d.37.1.1 (A:1-135) Unc 35.0 13 0.00098 25.2 3.1 48 150-197 76-124 (135)
4 d2j9la1 d.37.1.1 (A:578-746) C 34.1 13 0.00094 26.6 2.9 45 151-195 103-147 (169)
5 d2yvxa2 d.37.1.1 (A:132-275) M 33.4 8 0.00059 27.5 1.6 45 149-193 2-51 (144)
6 d2ef7a1 d.37.1.1 (A:1-127) Unc 32.4 15 0.0011 25.0 3.0 46 151-196 7-52 (127)
7 d2o16a3 d.37.1.1 (A:20-158) Hy 30.8 22 0.0016 24.5 3.7 35 154-188 81-115 (139)
8 d2ouxa2 d.37.1.1 (A:136-262) M 28.5 17 0.0013 25.0 2.7 41 152-192 69-109 (127)
9 d2yzia1 d.37.1.1 (A:4-135) Unc 28.0 20 0.0014 24.6 3.0 36 152-187 74-109 (132)
10 d2yzqa1 d.37.1.1 (A:123-278) U 27.9 21 0.0015 24.8 3.1 40 152-191 103-142 (156)
11 d1uf2c2 b.19.1.1 (C:148-300) R 27.9 23 0.0017 27.0 3.5 35 180-215 119-153 (153)
12 d2ef7a1 d.37.1.1 (A:1-127) Unc 27.8 27 0.002 23.6 3.7 41 152-192 71-111 (127)
13 d1y5ha3 d.37.1.1 (A:2-124) Hyp 27.2 22 0.0016 23.9 3.1 40 153-192 6-45 (123)
14 d2yzia1 d.37.1.1 (A:4-135) Unc 25.8 37 0.0027 23.1 4.1 40 153-192 10-49 (132)
15 d2yzqa2 d.37.1.1 (A:1-122) Unc 25.7 26 0.0019 23.7 3.2 41 152-192 64-104 (122)
16 d2v8qe1 d.37.1.1 (E:182-326) 5 25.5 38 0.0028 23.1 4.2 40 152-191 88-127 (145)
17 d1pvma4 d.37.1.1 (A:1-142) Hyp 25.1 31 0.0022 23.9 3.6 38 154-191 75-112 (142)
18 d2ooxe2 d.37.1.1 (E:182-334) U 22.5 44 0.0032 23.2 4.1 39 154-192 82-120 (153)
19 d1fyva_ c.23.2.1 (A:) Toll-lik 21.7 22 0.0016 25.8 2.2 29 160-188 48-76 (161)
20 d1fyxa_ c.23.2.1 (A:) Toll-lik 20.7 24 0.0017 25.2 2.2 28 160-187 43-70 (149)
No 1
>d2hx0a1 d.290.1.3 (A:6-141) Hypothetical protein STM3071 {Salmonella typhimurium [TaxId: 90371]}
Probab=99.26 E-value=6.5e-12 Score=98.46 Aligned_cols=65 Identities=17% Similarity=0.264 Sum_probs=60.5
Q ss_pred CCCceeEEEEecCCccHHHHHHHHhhcCC-ceEEEecccCeeeeEEeeCCCCCCCceeEeeeeeeec
Q 027891 151 GMGFTPHVITVAVGEDIAMKLLSFSQQGP-RAICVLSANGAISTATLRQPSSSGGSVTYECPFLEVY 216 (217)
Q Consensus 151 g~~f~pHVI~V~~GEDV~~kI~~Faqq~~-raiCILSasGsVSnVTLRqp~ssg~tvtyeGrFEILS 216 (217)
++..|-+++++.+||||.++|..||++.. ++.||+++.|++++|+|+++.. ....+++|+|||+|
T Consensus 3 ~~~~R~~~lrl~~Gedl~~~i~~~~~~~~I~~a~V~~~iGs~~~~~~~~~~~-~~~~~~~g~~Ei~s 68 (136)
T d2hx0a1 3 ASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQ-EATTSLTGTFEVIS 68 (136)
T ss_dssp CCCCEEEEEEECTTCBHHHHHHHHHHHHTCSSEEEEEEEEEEEEEEEECTTC-SSCEEEEEEEEEEE
T ss_pred CCCCcEEEEEECCCChHHHHHHHHHHHhCCCEEEEEEEeeeeEEEEEEeCCC-CCcEEecCcEEEEE
Confidence 47789999999999999999999998888 8999999999999999999987 56789999999997
No 2
>d2h6la1 d.290.1.3 (A:1-138) Hypothetical protein AF0104 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.94 E-value=2.8e-10 Score=88.34 Aligned_cols=62 Identities=15% Similarity=0.147 Sum_probs=54.9
Q ss_pred eeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeeeeEEeeCCCC---CCCceeEeeeeeeec
Q 027891 155 TPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAISTATLRQPSS---SGGSVTYECPFLEVY 216 (217)
Q Consensus 155 ~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVSnVTLRqp~s---sg~tvtyeGrFEILS 216 (217)
+-++|++.+||||.++|.+||++.....|++++.|++++|+|+.... ....+.++|+|||+|
T Consensus 10 r~~~~rl~~Gedl~~~l~~~~~~~~i~~a~is~iG~~~~~~l~~~~~~~~~~~~~~~~g~~Ei~s 74 (138)
T d2h6la1 10 KGFLLRLDYGKDLVRQIEEFLEEKGIHAAHISAIGAVRSAVIGYYDQEKKEYVKKELMEPLEILS 74 (138)
T ss_dssp EEEEEECCTTSBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEEETTTTEEEEEEECSCEEEEE
T ss_pred CEEEEEECCCChHHHHHHHHHHHcCCcEEEEEEEeecccceEEEecCCCCccceEecCCCEEEEE
Confidence 78999999999999999999999997778999999999999996433 234678999999997
No 3
>d3ddja2 d.37.1.1 (A:1-135) Uncharacterized protein SSO3205 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=35.03 E-value=13 Score=25.22 Aligned_cols=48 Identities=19% Similarity=0.101 Sum_probs=38.8
Q ss_pred CCCCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccC-eeeeEEee
Q 027891 150 AGMGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANG-AISTATLR 197 (217)
Q Consensus 150 ~g~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasG-sVSnVTLR 197 (217)
...-|+.-++.|.+.+++.+.+..|.+++=..++|+...| .|.-||++
T Consensus 76 v~~im~~~~~~v~~~~~l~~a~~~m~~~~i~~lpVvd~~g~lvGiit~~ 124 (135)
T d3ddja2 76 IIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTER 124 (135)
T ss_dssp GGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHH
T ss_pred HHHHhCCccceEEeccccchhhhhhhhcceeEEEEEeCCCEEEEEEEHH
Confidence 3455788889999999999999999998889999998887 55555543
No 4
>d2j9la1 d.37.1.1 (A:578-746) Chloride channel protein 5, ClC-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.11 E-value=13 Score=26.57 Aligned_cols=45 Identities=16% Similarity=0.045 Sum_probs=35.6
Q ss_pred CCCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeeeeEE
Q 027891 151 GMGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAISTAT 195 (217)
Q Consensus 151 g~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVSnVT 195 (217)
..-|++.+++|.+-+++.+.+-.|.+.+.+.++|.-..-.|--||
T Consensus 103 ~~im~~~~~tv~~~~~l~~v~~~~~~~~~~~l~V~d~g~lvGiIt 147 (169)
T d2j9la1 103 RNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIIT 147 (169)
T ss_dssp GGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEE
T ss_pred hhhccCCCEEECCCCcHHHHHHHHHhcCceEEEEEECCEEEEEEE
Confidence 344778899999999999999889999999999987544444444
No 5
>d2yvxa2 d.37.1.1 (A:132-275) Magnesium transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=33.37 E-value=8 Score=27.45 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=35.4
Q ss_pred CCCCCceeEEEEecCCccHHHHHHHHhhcC-----CceEEEecccCeeee
Q 027891 149 SAGMGFTPHVITVAVGEDIAMKLLSFSQQG-----PRAICVLSANGAIST 193 (217)
Q Consensus 149 s~g~~f~pHVI~V~~GEDV~~kI~~Faqq~-----~raiCILSasGsVSn 193 (217)
++|.-|++.+|+|.+..-|.+.|-.+-++. -..++|+...|.+.-
T Consensus 2 taG~iM~~~~itv~~~~tv~ea~~~m~~~~~~~~~~~~~~Vvd~~~~l~G 51 (144)
T d2yvxa2 2 EAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKG 51 (144)
T ss_dssp SSGGGCBSCCCEECSSCBHHHHHHHSSSSCTTSSCSSBCEEBCTTCBBCC
T ss_pred CcccccCCCCEEECCCCcHHHHHHHHHHhcccccceeeeEEecCCCCEec
Confidence 578889999999999999999997765553 246888888766543
No 6
>d2ef7a1 d.37.1.1 (A:1-127) Uncharacterized protein ST2348 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=32.45 E-value=15 Score=25.05 Aligned_cols=46 Identities=13% Similarity=0.133 Sum_probs=37.5
Q ss_pred CCCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeeeeEEe
Q 027891 151 GMGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAISTATL 196 (217)
Q Consensus 151 g~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVSnVTL 196 (217)
..-|+..++.|.+...|.+.+-.|.+.+-..++|+.....+.-+|.
T Consensus 7 ~d~m~~~~v~v~~~~tl~~a~~~m~~~~~~~~pV~d~~~~~Givt~ 52 (127)
T d2ef7a1 7 KEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITE 52 (127)
T ss_dssp GGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEH
T ss_pred HHhCCCCCeEECCcCcHHHHHHHHHHcCCceEEeecccchhhhcch
Confidence 3457888999999999999998898888899999987655555554
No 7
>d2o16a3 d.37.1.1 (A:20-158) Hypothetical protein VC0737 {Vibrio cholerae [TaxId: 666]}
Probab=30.83 E-value=22 Score=24.49 Aligned_cols=35 Identities=11% Similarity=0.169 Sum_probs=30.0
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEeccc
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSAN 188 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSas 188 (217)
|+..++.|.+.+++.+.+..|.+++-+.++|+...
T Consensus 81 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~ 115 (139)
T d2o16a3 81 MHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKD 115 (139)
T ss_dssp SCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEETT
T ss_pred hccccccccccchHHHHHHHHHHcCceEEEEEECC
Confidence 45667899999999999988998888899999853
No 8
>d2ouxa2 d.37.1.1 (A:136-262) Magnesium transporter MgtE {Enterococcus faecalis [TaxId: 1351]}
Probab=28.46 E-value=17 Score=25.01 Aligned_cols=41 Identities=20% Similarity=0.126 Sum_probs=35.1
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAIS 192 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVS 192 (217)
.-|+..++.|.+.+++.+.+..|.+.+-+.+-|+...|-+-
T Consensus 69 ~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lPVVD~~g~lv 109 (127)
T d2ouxa2 69 DILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLL 109 (127)
T ss_dssp HHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEE
T ss_pred hhccCCCccCCCCCCHHHHHHHHHHhCCEEEEEEeCCCEEE
Confidence 34777788999999999999999999999999998877653
No 9
>d2yzia1 d.37.1.1 (A:4-135) Uncharacterized protein PH0107 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.05 E-value=20 Score=24.63 Aligned_cols=36 Identities=17% Similarity=0.166 Sum_probs=30.4
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecc
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSA 187 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSa 187 (217)
.-|.+.++.|.+.+++.+.+..|.+.+-+.+.|...
T Consensus 74 ~im~~~~~~v~~~~~~~~~~~~m~~~~~~~l~V~~~ 109 (132)
T d2yzia1 74 RIMTRNLITANVNTPLGEVLRKMAEHRIKHILIEEE 109 (132)
T ss_dssp GTCBCSCCEEETTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred ecccccccccCcchHHHHHHHHHHHcCCCEEEEEEC
Confidence 346677889999999999999999999888888754
No 10
>d2yzqa1 d.37.1.1 (A:123-278) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=27.94 E-value=21 Score=24.75 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=34.4
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
..|++.+++|.+...+.+.+-.|.+.+-+.+.|+...|-+
T Consensus 103 ~~m~~~~~tv~~~~~l~~~~~~m~~~~~~~lpVvd~~g~l 142 (156)
T d2yzqa1 103 EIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDL 142 (156)
T ss_dssp GTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEE
T ss_pred hhcccCceEECcccccHHHHHHHHHcCeeEEEEEeCCCEE
Confidence 3467778889999999999999999999999999887754
No 11
>d1uf2c2 b.19.1.1 (C:148-300) RDV p8, central (top) domain {Rice dwarf virus [TaxId: 10991]}
Probab=27.89 E-value=23 Score=27.02 Aligned_cols=35 Identities=20% Similarity=0.146 Sum_probs=30.2
Q ss_pred ceEEEecccCeeeeEEeeCCCCCCCceeEeeeeeee
Q 027891 180 RAICVLSANGAISTATLRQPSSSGGSVTYECPFLEV 215 (217)
Q Consensus 180 raiCILSasGsVSnVTLRqp~ssg~tvtyeGrFEIL 215 (217)
-++-=+|=+|=+-||||--|-. |=.+.+||.|.||
T Consensus 119 D~ivSfSl~GG~Invtt~Vp~t-Gf~IAIeG~F~ml 153 (153)
T d1uf2c2 119 DSRLSFSLGGGNINLELGVAKT-GFCVAIEGEFTIL 153 (153)
T ss_dssp SCCEEEEGGGSEEEEEESSCBS-SEEEEEEEEEEEC
T ss_pred cCEEEEEecCceEEEEEcccce-eEEEEEecceeeC
Confidence 3566788899999999999987 6689999999997
No 12
>d2ef7a1 d.37.1.1 (A:1-127) Uncharacterized protein ST2348 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=27.76 E-value=27 Score=23.59 Aligned_cols=41 Identities=22% Similarity=0.207 Sum_probs=34.5
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAIS 192 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVS 192 (217)
.-+...+++|.+.+++.+.+-.|.+.+-..++|+...|-+-
T Consensus 71 ~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~lv 111 (127)
T d2ef7a1 71 EFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLK 111 (127)
T ss_dssp GTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEE
T ss_pred hhhhhhccccccccchhHHHHHHHHcCceEEEEEeCCCeEE
Confidence 34667788999999999999889898888999998887654
No 13
>d1y5ha3 d.37.1.1 (A:2-124) Hypothetical protein Rv2626c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=27.22 E-value=22 Score=23.95 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=33.9
Q ss_pred CceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeee
Q 027891 153 GFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAIS 192 (217)
Q Consensus 153 ~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVS 192 (217)
-|+..++.|.+.+.|.+.+..+.+++-+.++|+...|.+.
T Consensus 6 iM~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~~~ 45 (123)
T d1y5ha3 6 IMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLH 45 (123)
T ss_dssp HSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEE
T ss_pred hcCCCCcEECCcCcHHHHHHHHHHcCCCceEEEeccchhh
Confidence 3677788999999999999889888889999998777543
No 14
>d2yzia1 d.37.1.1 (A:4-135) Uncharacterized protein PH0107 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.76 E-value=37 Score=23.11 Aligned_cols=40 Identities=10% Similarity=0.149 Sum_probs=34.5
Q ss_pred CceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeee
Q 027891 153 GFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAIS 192 (217)
Q Consensus 153 ~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVS 192 (217)
-|+.-+++|.+.+.+.+.+-.+.+.+.+.++|+...|.+-
T Consensus 10 im~~~~~~v~~~~t~~~a~~~m~~~~~~~~~Vvd~~~~~~ 49 (132)
T d2yzia1 10 YMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVV 49 (132)
T ss_dssp TCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEE
T ss_pred HcCCCCeEECCcCcHHHHHHHHHHcCCcEEEEecccceee
Confidence 3556689999999999999999999999999998887644
No 15
>d2yzqa2 d.37.1.1 (A:1-122) Uncharacterized protein PH1780 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.72 E-value=26 Score=23.68 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=34.3
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAIS 192 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVS 192 (217)
.-+...++++.+.+++.+.+..|.+.+-..++|+...|.+-
T Consensus 64 ~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~~~li 104 (122)
T d2yzqa2 64 MLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPV 104 (122)
T ss_dssp CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEE
T ss_pred hccccceeecchhhHHHHHHHHHHHcCcEEEEEEeCCCEEE
Confidence 44566678999999999999999999989999998887543
No 16
>d2v8qe1 d.37.1.1 (E:182-326) 5'-AMP-activated protein kinase subunit gamma-1, AMPKg {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.52 E-value=38 Score=23.09 Aligned_cols=40 Identities=8% Similarity=0.159 Sum_probs=33.1
Q ss_pred CCceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 152 MGFTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 152 ~~f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
..+...+++|.+.+++.+.+..|.+++-+.++|+...|.+
T Consensus 88 ~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l 127 (145)
T d2v8qe1 88 SHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVV 127 (145)
T ss_dssp CSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBE
T ss_pred hhccCCCeEECCCCcHHHHHHHHHHcCceEEEEEccCCEE
Confidence 3455667789999999999999999998999999877654
No 17
>d1pvma4 d.37.1.1 (A:1-142) Hypothetical protein Ta0289 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=25.06 E-value=31 Score=23.94 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=32.4
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCee
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAI 191 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsV 191 (217)
|+.-+++|.+.+++.+.+..|.+.+-+.++|+...|-+
T Consensus 75 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~l 112 (142)
T d1pvma4 75 MRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRV 112 (142)
T ss_dssp SBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCE
T ss_pred cccccccccchhhHHHHHHHHHHcCCcEEEEEecCCEE
Confidence 44557899999999999988999999999999988743
No 18
>d2ooxe2 d.37.1.1 (E:182-334) Uncharacterized protein C1556.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=22.55 E-value=44 Score=23.16 Aligned_cols=39 Identities=10% Similarity=0.024 Sum_probs=32.5
Q ss_pred ceeEEEEecCCccHHHHHHHHhhcCCceEEEecccCeee
Q 027891 154 FTPHVITVAVGEDIAMKLLSFSQQGPRAICVLSANGAIS 192 (217)
Q Consensus 154 f~pHVI~V~~GEDV~~kI~~Faqq~~raiCILSasGsVS 192 (217)
+...++.+.+.+++.+.+..|.+++-+.++|+...|-+.
T Consensus 82 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~lv 120 (153)
T d2ooxe2 82 NFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLE 120 (153)
T ss_dssp CSSCCCEECTTCBHHHHHHHHHHSCCSEEEEECTTCBEE
T ss_pred ccCCCeEECCCCcHHHHHHhhhhceeeEEEEEcCCCEEE
Confidence 456678899999999999889988889999998776654
No 19
>d1fyva_ c.23.2.1 (A:) Toll-like receptor 1, TLR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.69 E-value=22 Score=25.79 Aligned_cols=29 Identities=24% Similarity=0.413 Sum_probs=25.7
Q ss_pred EecCCccHHHHHHHHhhcCCceEEEeccc
Q 027891 160 TVAVGEDIAMKLLSFSQQGPRAICVLSAN 188 (217)
Q Consensus 160 ~V~~GEDV~~kI~~Faqq~~raiCILSas 188 (217)
.+.+|+++.+.|....++..+.|+|||-+
T Consensus 48 d~~~G~~~~~~i~~~i~~s~~~i~vlS~~ 76 (161)
T d1fyva_ 48 NFVPGKSIVENIITCIEKSYKSIFVLSPN 76 (161)
T ss_dssp TCCTTSCHHHHHHHHHHHEEEEEEEESHH
T ss_pred ccccccccHHHHHHHHHhCCEEEEEecCc
Confidence 46899999999999999988999999864
No 20
>d1fyxa_ c.23.2.1 (A:) Toll-like receptor 2, TLR2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.72 E-value=24 Score=25.16 Aligned_cols=28 Identities=18% Similarity=0.241 Sum_probs=25.1
Q ss_pred EecCCccHHHHHHHHhhcCCceEEEecc
Q 027891 160 TVAVGEDIAMKLLSFSQQGPRAICVLSA 187 (217)
Q Consensus 160 ~V~~GEDV~~kI~~Faqq~~raiCILSa 187 (217)
.+.+|+++.+.|.....+..+.|+|||.
T Consensus 43 d~~~G~~~~~~i~~~i~~S~~~i~vlS~ 70 (149)
T d1fyxa_ 43 DFIHGKWIIDNIIDSIEKSHKTVFVLSE 70 (149)
T ss_dssp HCCSSSCHHHHHHHHHHHEEEEEEEECH
T ss_pred cccccchHHHHHHHHHHhCCEEEEEEcC
Confidence 4678999999999999988899999985
Done!