AmiGO: BLAST Results


BLAST match view associations BLAST with AT2G26970 AT2G26970 AT2G26970	protein from Arabidopsis thaliana	1.7e-73
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Uncharacterized protein	protein from Gallus gallus	6.2e-46
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Bos taurus	1.3e-45
BLAST match view associations BLAST with Rexo2 Rexo2 Rexo2 REX2, RNA exonuclease 2 homolog (S. cerevisiae)	protein from Mus musculus	2.1e-45
BLAST match view associations BLAST with Rexo2 Rexo2 Rexo2 REX2, RNA exonuclease 2 homolog (S. cerevisiae)	gene from Rattus norvegicus	2.1e-45
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-45
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	2.7e-45
BLAST match view associations BLAST with smfn smfn smfn small fragment nuclease	gene_product from Danio rerio	3.1e-44
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	1.1e-41
BLAST match view associations BLAST with CG10214 CG10214 CG10214	protein from Drosophila melanogaster	3.3e-40
BLAST match view associations BLAST with C08B6.8 C08B6.8 C08B6.8	gene from Caenorhabditis elegans	1.1e-39
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	2.1e-38
BLAST match view associations BLAST with rexo2-2 rexo2-2 rexo2-2 RNA exonuclease 2	gene from Dictyostelium discoideum	5.5e-38
BLAST match view associations BLAST with rexo2-1 rexo2-1 rexo2-1 RNA exonuclease 2	gene from Dictyostelium discoideum	5.5e-38
BLAST match view associations BLAST with orn orn orn Oligoribonuclease	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.1e-34
BLAST match view associations BLAST with VC_0341 VC_0341 VC_0341 oligoribonuclease	protein from Vibrio cholerae O1 biovar El Tor	1.1e-34
BLAST match view associations BLAST with orn orn orn oligoribonuclease monomer	protein from Escherichia coli K-12	1.3e-34
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	5.8e-34
BLAST match view associations BLAST with SO_0592 SO_0592 SO_0592 oligoribonuclease	protein from Shewanella oneidensis MR-1	7.4e-34
BLAST match view associations BLAST with CBU_1235 CBU_1235 CBU_1235 oligoribonuclease	protein from Coxiella burnetii RSA 493	1.5e-33
BLAST match view associations BLAST with REX2 REX2 REX2 3'-5' RNA exonuclease	gene from Saccharomyces cerevisiae	3.2e-33
BLAST match view associations BLAST with CPS_4379 CPS_4379 CPS_4379 oligoribonuclease	protein from Colwellia psychrerythraea 34H	8.5e-33
BLAST match view associations BLAST with orn orn orn Oligoribonuclease	protein from Pseudomonas protegens Pf-5	1.4e-32
BLAST match view associations BLAST with orn orn orn Oligoribonuclease	protein from Mycobacterium tuberculosis	1.4e-30
BLAST match view associations BLAST with REX2 REX2 REX2	gene_product from Candida albicans	1.3e-27
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	2.6e-24
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	3.3e-24
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	3.6e-18
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	2.9e-16
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	1.5e-10
BLAST match view associations BLAST with REXO2 REXO2 REXO2 REXO2 protein	protein from Homo sapiens	3.0e-07
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Uncharacterized protein	protein from Sus scrofa	3.0e-07
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	1.5e-06
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	1.5e-06

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  027892
        (217 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2059263 - symbol:AT2G26970 species:3702 "Arabi...   742  1.7e-73   1
UNIPROTKB|F1NGJ1 - symbol:REXO2 "Uncharacterized protein"...   482  6.2e-46   1
UNIPROTKB|A2VE52 - symbol:REXO2 "Oligoribonuclease, mitoc...   479  1.3e-45   1
MGI|MGI:1888981 - symbol:Rexo2 "REX2, RNA exonuclease 2 h...   477  2.1e-45   1
RGD|1304874 - symbol:Rexo2 "REX2, RNA exonuclease 2 homol...   477  2.1e-45   1
UNIPROTKB|Q5U1X1 - symbol:Rexo2 "Oligoribonuclease, mitoc...   477  2.1e-45   1
UNIPROTKB|E2QWT2 - symbol:REXO2 "Uncharacterized protein"...   476  2.7e-45   1
UNIPROTKB|Q9Y3B8 - symbol:REXO2 "Oligoribonuclease, mitoc...   476  2.7e-45   1
ZFIN|ZDB-GENE-040426-1709 - symbol:smfn "small fragment n...   466  3.1e-44   1
UNIPROTKB|H0YG54 - symbol:REXO2 "Oligoribonuclease, mitoc...   442  1.1e-41   1
FB|FBgn0039115 - symbol:CG10214 species:7227 "Drosophila ...   428  3.3e-40   1
WB|WBGene00007429 - symbol:C08B6.8 species:6239 "Caenorha...   423  1.1e-39   1
UNIPROTKB|F5GYG5 - symbol:REXO2 "Oligoribonuclease, mitoc...   411  2.1e-38   1
DICTYBASE|DDB_G0273741 - symbol:rexo2-2 "RNA exonuclease ...   407  5.5e-38   1
DICTYBASE|DDB_G0273355 - symbol:rexo2-1 "RNA exonuclease ...   407  5.5e-38   1
UNIPROTKB|Q9KV17 - symbol:orn "Oligoribonuclease" species...   376  1.1e-34   1
TIGR_CMR|VC_0341 - symbol:VC_0341 "oligoribonuclease" spe...   376  1.1e-34   1
UNIPROTKB|P0A784 - symbol:orn "oligoribonuclease monomer"...   375  1.3e-34   1
UNIPROTKB|H0YGR4 - symbol:REXO2 "Oligoribonuclease, mitoc...   369  5.8e-34   1
TIGR_CMR|SO_0592 - symbol:SO_0592 "oligoribonuclease" spe...   368  7.4e-34   1
TIGR_CMR|CBU_1235 - symbol:CBU_1235 "oligoribonuclease" s...   365  1.5e-33   1
SGD|S000004049 - symbol:REX2 "3'-5' RNA exonuclease" spec...   362  3.2e-33   1
TIGR_CMR|CPS_4379 - symbol:CPS_4379 "oligoribonuclease" s...   358  8.5e-33   1
UNIPROTKB|Q4KJ81 - symbol:orn "Oligoribonuclease" species...   356  1.4e-32   1
UNIPROTKB|P65597 - symbol:orn "Oligoribonuclease" species...   337  1.4e-30   1
POMBASE|SPBC1347.07 - symbol:rex2 "RNA exonuclease (predi...   337  1.4e-30   1
ASPGD|ASPL0000041574 - symbol:AN10348 species:162425 "Eme...   325  2.7e-29   1
CGD|CAL0004656 - symbol:REX2 species:5476 "Candida albica...   309  1.3e-27   1
UNIPROTKB|H0YG83 - symbol:REXO2 "Oligoribonuclease, mitoc...   278  2.6e-24   1
UNIPROTKB|F5GX07 - symbol:REXO2 "Oligoribonuclease, mitoc...   277  3.3e-24   1
UNIPROTKB|H0YH58 - symbol:REXO2 "Oligoribonuclease, mitoc...   220  3.6e-18   1
UNIPROTKB|F5H784 - symbol:REXO2 "Oligoribonuclease, mitoc...   202  2.9e-16   1
UNIPROTKB|H0YF66 - symbol:REXO2 "Oligoribonuclease, mitoc...   148  1.5e-10   1
UNIPROTKB|Q9BTR4 - symbol:REXO2 "REXO2 protein" species:9...   119  3.0e-07   1
UNIPROTKB|F1SJV8 - symbol:REXO2 "Uncharacterized protein"...   119  3.0e-07   1
UNIPROTKB|F5H6P8 - symbol:REXO2 "Oligoribonuclease, mitoc...   113  1.5e-06   1
UNIPROTKB|H0YG37 - symbol:REXO2 "Oligoribonuclease, mitoc...   113  1.5e-06   1


>TAIR|locus:2059263 [details] [associations]
            symbol:AT2G26970 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
            "exonuclease activity" evidence=IEA;ISS] [GO:0005622
            "intracellular" evidence=IEA;ISS] InterPro:IPR006055
            InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
            GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AC005623
            HOGENOM:HOG000246596 EMBL:AY064031 EMBL:BT001963 IPI:IPI00519246
            PIR:B84667 RefSeq:NP_850090.1 UniGene:At.27095
            ProteinModelPortal:Q9ZVE0 SMR:Q9ZVE0 STRING:Q9ZVE0 PaxDb:Q9ZVE0
            PRIDE:Q9ZVE0 EnsemblPlants:AT2G26970.1 GeneID:817238
            KEGG:ath:AT2G26970 TAIR:At2g26970 eggNOG:COG1949 InParanoid:Q9ZVE0
            KO:K13288 OMA:LEAFFHY PhylomeDB:Q9ZVE0 ProtClustDB:CLSN2690937
            Genevestigator:Q9ZVE0 Uniprot:Q9ZVE0
        Length = 222

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 141/205 (68%), Positives = 167/205 (81%)

Query:     8 ESKSKANSSSNLTLENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGK 67
             E    A+SSS    E   N     + +YK PLVWIDLEMTGL +EVDRILEIACIIT+G 
Sbjct:    16 EDAPMASSSSTGKQEESVNGSLE-DGDYKQPLVWIDLEMTGLNVEVDRILEIACIITNGD 74

Query:    68 LTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKN 127
             LT+SVEGPDLV+ QTK+CLD M +WCQ HH ASGLTKKVL S +TEREAE++V+EFVKK+
Sbjct:    75 LTQSVEGPDLVVRQTKDCLDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKH 134

Query:   128 VGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKE 187
             VG+  PLLAGNSVYVDF+FLKKYMP+LA+LF H+LVDVSS+KALC RW+P + RK P+K+
Sbjct:   135 VGSGNPLLAGNSVYVDFLFLKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKK 194

Query:   188 QKHRALDDIRESIMELKYYKENIFK 212
               HRA+DDIRESI ELKYYK+ IFK
Sbjct:   195 NNHRAMDDIRESIKELKYYKKTIFK 219


>UNIPROTKB|F1NGJ1 [details] [associations]
            symbol:REXO2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
            HAMAP:MF_00045 InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005730 GO:GO:0003676 InterPro:IPR013520
            SUPFAM:SSF53098 GO:GO:0008408 OMA:LEAFFHY
            GeneTree:ENSGT00390000009255 EMBL:AADN02041797 EMBL:AADN02041798
            IPI:IPI00598739 Ensembl:ENSGALT00000011363 Uniprot:F1NGJ1
        Length = 236

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 93/181 (51%), Positives = 123/181 (67%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL +E D+ILE+AC+ITD  L    EGP+L+I Q  E LDSM EWC+ HH 
Sbjct:    42 MVWVDLEMTGLDVEKDQILEMACLITDSDLNVLAEGPNLIIKQPDELLDSMSEWCKEHHG 101

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLTK V  S ++ ++AE + + FV++        LAGNSV+ D  FL KYMP      
Sbjct:   102 KSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMRHL 161

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK--TNLK 216
              + ++DVS++K LC RWYP +Y   P K   HRALDDIRESI EL++Y+++IFK  T+ K
Sbjct:   162 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDIRESIKELQFYRDSIFKRKTDEK 221

Query:   217 K 217
             K
Sbjct:   222 K 222


>UNIPROTKB|A2VE52 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0005886
            "plasma membrane" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR022894
            SMART:SM00479 Pfam:PF00929 GO:GO:0005739 GO:GO:0005886
            GO:GO:0005730 GO:GO:0003676 GO:GO:0090305 InterPro:IPR013520
            SUPFAM:SSF53098 GO:GO:0008408 HOGENOM:HOG000246596 eggNOG:COG1949
            KO:K13288 OMA:LEAFFHY EMBL:BC133575 IPI:IPI00708018
            RefSeq:NP_001075204.1 UniGene:Bt.57665 ProteinModelPortal:A2VE52
            STRING:A2VE52 PRIDE:A2VE52 Ensembl:ENSBTAT00000007680 GeneID:540139
            KEGG:bta:540139 CTD:25996 GeneTree:ENSGT00390000009255
            HOVERGEN:HBG002323 InParanoid:A2VE52 OrthoDB:EOG437RG0
            NextBio:20878440 Uniprot:A2VE52
        Length = 237

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 93/181 (51%), Positives = 121/181 (66%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH 
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLTK V  S +T ++AE + + FV++        LAGNSV+ D  FL KYMP      
Sbjct:   103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK--TNLK 216
              + ++DVS++K LC RWYP +Y   P K   HRALDDI ESI EL++Y+ NIFK  T+ K
Sbjct:   163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKTDEK 222

Query:   217 K 217
             K
Sbjct:   223 K 223


>MGI|MGI:1888981 [details] [associations]
            symbol:Rexo2 "REX2, RNA exonuclease 2 homolog (S.
            cerevisiae)" species:10090 "Mus musculus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004518 "nuclease activity"
            evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0006139 "nucleobase-containing
            compound metabolic process" evidence=ISA] [GO:0008408 "3'-5'
            exonuclease activity" evidence=ISA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016788 "hydrolase activity, acting on
            ester bonds" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 MGI:MGI:1888981
            GO:GO:0005739 GO:GO:0005886 GO:GO:0005730 GO:GO:0003676
            InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408
            HOGENOM:HOG000246596 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY CTD:25996
            GeneTree:ENSGT00390000009255 HOVERGEN:HBG002323 OrthoDB:EOG437RG0
            EMBL:AK007731 IPI:IPI00173343 RefSeq:NP_077195.2 UniGene:Mm.21911
            ProteinModelPortal:Q9D8S4 SMR:Q9D8S4 STRING:Q9D8S4
            PhosphoSite:Q9D8S4 PaxDb:Q9D8S4 PRIDE:Q9D8S4
            Ensembl:ENSMUST00000034524 GeneID:104444 KEGG:mmu:104444
            UCSC:uc009pia.1 InParanoid:Q9D8S4 NextBio:357130 Bgee:Q9D8S4
            CleanEx:MM_REXO2 Genevestigator:Q9D8S4
            GermOnline:ENSMUSG00000032026 Uniprot:Q9D8S4
        Length = 237

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 93/181 (51%), Positives = 121/181 (66%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH 
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLTK V  S +T ++AE + + FV++        LAGNSV+ D  FL K+MP      
Sbjct:   103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK--TNLK 216
              + ++DVS++K LC RWYP DY   P K   HRALDDI ESI EL++Y+ NIFK  T+ K
Sbjct:   163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKTDEK 222

Query:   217 K 217
             K
Sbjct:   223 K 223


>RGD|1304874 [details] [associations]
            symbol:Rexo2 "REX2, RNA exonuclease 2 homolog (S. cerevisiae)"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005739
            "mitochondrion" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
            evidence=IEA;ISO] [GO:0006139 "nucleobase-containing compound
            metabolic process" evidence=ISO] [GO:0008408 "3'-5' exonuclease
            activity" evidence=IEA;ISO] InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 RGD:1304874
            GO:GO:0005739 GO:GO:0005886 GO:GO:0005730 GO:GO:0003676
            GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408
            HOGENOM:HOG000246596 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY CTD:25996
            GeneTree:ENSGT00390000009255 HOVERGEN:HBG002323 OrthoDB:EOG437RG0
            EMBL:BC086420 IPI:IPI00373292 RefSeq:NP_001008327.1
            UniGene:Rn.11496 ProteinModelPortal:Q5U1X1 STRING:Q5U1X1
            PRIDE:Q5U1X1 Ensembl:ENSRNOT00000047633 GeneID:300689
            KEGG:rno:300689 UCSC:RGD:1304874 InParanoid:Q5U1X1 NextBio:647326
            ArrayExpress:Q5U1X1 Genevestigator:Q5U1X1
            GermOnline:ENSRNOG00000018939 Uniprot:Q5U1X1
        Length = 237

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 93/181 (51%), Positives = 121/181 (66%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH 
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLTK V  S +T ++AE + + FV++        LAGNSV+ D  FL K+MP      
Sbjct:   103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK--TNLK 216
              + ++DVS++K LC RWYP DY   P K   HRALDDI ESI EL++Y+ NIFK  T+ K
Sbjct:   163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKTDEK 222

Query:   217 K 217
             K
Sbjct:   223 K 223


>UNIPROTKB|Q5U1X1 [details] [associations]
            symbol:Rexo2 "Oligoribonuclease, mitochondrial"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 RGD:1304874
            GO:GO:0005739 GO:GO:0005886 GO:GO:0005730 GO:GO:0003676
            GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408
            HOGENOM:HOG000246596 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY CTD:25996
            GeneTree:ENSGT00390000009255 HOVERGEN:HBG002323 OrthoDB:EOG437RG0
            EMBL:BC086420 IPI:IPI00373292 RefSeq:NP_001008327.1
            UniGene:Rn.11496 ProteinModelPortal:Q5U1X1 STRING:Q5U1X1
            PRIDE:Q5U1X1 Ensembl:ENSRNOT00000047633 GeneID:300689
            KEGG:rno:300689 UCSC:RGD:1304874 InParanoid:Q5U1X1 NextBio:647326
            ArrayExpress:Q5U1X1 Genevestigator:Q5U1X1
            GermOnline:ENSRNOG00000018939 Uniprot:Q5U1X1
        Length = 237

 Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
 Identities = 93/181 (51%), Positives = 121/181 (66%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH 
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLTK V  S +T ++AE + + FV++        LAGNSV+ D  FL K+MP      
Sbjct:   103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK--TNLK 216
              + ++DVS++K LC RWYP DY   P K   HRALDDI ESI EL++Y+ NIFK  T+ K
Sbjct:   163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKTDEK 222

Query:   217 K 217
             K
Sbjct:   223 K 223


>UNIPROTKB|E2QWT2 [details] [associations]
            symbol:REXO2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
            [GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] HAMAP:MF_00045
            InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR022894
            SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
            GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 OMA:LEAFFHY
            GeneTree:ENSGT00390000009255 EMBL:AAEX03003476 EMBL:AAEX03003474
            EMBL:AAEX03003475 Ensembl:ENSCAFT00000021436 Uniprot:E2QWT2
        Length = 236

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 93/181 (51%), Positives = 121/181 (66%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH 
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLTK V  S +T+ +AE + + FV++        LAGNSV+ D  FL KYMP      
Sbjct:   103 KSGLTKAVKESTMTQ-QAEYEFLSFVRQQTSPGLCPLAGNSVHADKKFLDKYMPQFMKHL 161

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK--TNLK 216
              + ++DVS++K LC RWYP +Y   P K   HRALDDI ESI EL++Y+ NIFK  T+ K
Sbjct:   162 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKTDEK 221

Query:   217 K 217
             K
Sbjct:   222 K 222


>UNIPROTKB|Q9Y3B8 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=IDA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IDA] [GO:0009117 "nucleotide metabolic process"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR006055
            InterPro:IPR012337 InterPro:IPR022894 SMART:SM00479 Pfam:PF00929
            GO:GO:0005739 GO:GO:0005886 CleanEx:HS_SFN GO:GO:0005730
            GO:GO:0009117 GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
            GO:GO:0008408 HOGENOM:HOG000246596 eggNOG:COG1949 KO:K13288
            OMA:LEAFFHY CTD:25996 HOVERGEN:HBG002323 OrthoDB:EOG437RG0
            EMBL:AF151872 EMBL:AL110239 EMBL:CR533500 EMBL:AK223200
            EMBL:BC105024 EMBL:BC105026 EMBL:BC107887 IPI:IPI00032830
            IPI:IPI00217330 PIR:T14770 RefSeq:NP_056338.2 UniGene:Hs.677190
            UniGene:Hs.714231 ProteinModelPortal:Q9Y3B8 SMR:Q9Y3B8
            STRING:Q9Y3B8 PhosphoSite:Q9Y3B8 DMDM:116242694 PaxDb:Q9Y3B8
            PRIDE:Q9Y3B8 DNASU:25996 Ensembl:ENST00000265881 GeneID:25996
            KEGG:hsa:25996 UCSC:uc001poy.3 GeneCards:GC11P114311
            H-InvDB:HIX0010145 HGNC:HGNC:17851 HPA:HPA038450 HPA:HPA038451
            MIM:607149 neXtProt:NX_Q9Y3B8 PharmGKB:PA142671085
            InParanoid:Q9Y3B8 PhylomeDB:Q9Y3B8 ChiTaRS:REXO2 GenomeRNAi:25996
            NextBio:47710 ArrayExpress:Q9Y3B8 Bgee:Q9Y3B8 CleanEx:HS_REXO2
            Genevestigator:Q9Y3B8 GermOnline:ENSG00000076043 Uniprot:Q9Y3B8
        Length = 237

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 90/177 (50%), Positives = 118/177 (66%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH 
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLTK V  S +T ++AE + + FV++        LAGNSV+ D  FL KYMP      
Sbjct:   103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 162

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 215
              + ++DVS++K LC RWYP +Y   P K   HRALDDI ESI EL++Y+ NIFK  +
Sbjct:   163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKI 219


>ZFIN|ZDB-GENE-040426-1709 [details] [associations]
            symbol:smfn "small fragment nuclease" species:7955
            "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004527 "exonuclease activity" evidence=IEA] [GO:0016788
            "hydrolase activity, acting on ester bonds" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] HAMAP:MF_00045
            InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR022894
            SMART:SM00479 Pfam:PF00929 ZFIN:ZDB-GENE-040426-1709 GO:GO:0003676
            GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
            GeneTree:ENSGT00390000009255 EMBL:CU633836 IPI:IPI00487828
            Ensembl:ENSDART00000003435 ArrayExpress:F1QNX9 Bgee:F1QNX9
            Uniprot:F1QNX9
        Length = 259

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 86/179 (48%), Positives = 121/179 (67%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+I+E+ACI+TD  L    EGP+L+I+Q  + LD M +WC+ HH 
Sbjct:    69 MVWVDLEMTGLDIEKDQIIEMACIVTDSDLNVIAEGPNLIINQPDDLLDGMSDWCKEHHG 128

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLT+ V  S +T ++AE + + F++++       LAGNSV+ D  FL KYMP      
Sbjct:   129 KSGLTQAVRDSHITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHADKKFLDKYMPQFMHHL 188

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 217
              + ++DVS+IK L  RWYP +Y   P K+  HRALDDI+ESI EL++Y+ ++FK   KK
Sbjct:   189 HYRIIDVSTIKELSRRWYPEEYNLAPQKKSSHRALDDIQESIKELQFYRTSVFKAKEKK 247


>UNIPROTKB|H0YG54 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
            GO:GO:0005739 GO:GO:0005886 GO:GO:0005730 GO:GO:0003676
            GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:17851
            ChiTaRS:REXO2 EMBL:AP002373 Ensembl:ENST00000544827 Uniprot:H0YG54
        Length = 197

 Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
 Identities = 85/171 (49%), Positives = 112/171 (65%)

Query:    45 EMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHEASGLTK 104
             +MTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH  SGLTK
Sbjct:     9 KMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTK 68

Query:   105 KVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVD 164
              V  S +T ++AE + + FV++        LAGNSV+ D  FL KYMP       + ++D
Sbjct:    69 AVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHLHYRIID 128

Query:   165 VSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 215
             VS++K LC RWYP +Y   P K   HRALDDI ESI EL++Y+ NIFK  +
Sbjct:   129 VSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKI 179


>FB|FBgn0039115 [details] [associations]
            symbol:CG10214 species:7227 "Drosophila melanogaster"
            [GO:0000175 "3'-5'-exoribonuclease activity" evidence=NAS]
            [GO:0008946 "oligonucleotidase activity" evidence=ISS] [GO:0005739
            "mitochondrion" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR006055
            InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 EMBL:AE014297
            GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 GO:GO:0090305
            InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG1949 KO:K13288
            OMA:LEAFFHY GeneTree:ENSGT00390000009255 EMBL:AY061251
            RefSeq:NP_651184.1 UniGene:Dm.23336 ProteinModelPortal:Q9VCI0
            SMR:Q9VCI0 DIP:DIP-17679N IntAct:Q9VCI0 MINT:MINT-1548388
            STRING:Q9VCI0 PaxDb:Q9VCI0 PRIDE:Q9VCI0 EnsemblMetazoa:FBtr0084463
            GeneID:42811 KEGG:dme:Dmel_CG10214 UCSC:CG10214-RA
            FlyBase:FBgn0039115 InParanoid:Q9VCI0 OrthoDB:EOG41ZCT5
            PhylomeDB:Q9VCI0 GenomeRNAi:42811 NextBio:830698 Bgee:Q9VCI0
            GermOnline:CG10214 Uniprot:Q9VCI0
        Length = 211

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 85/174 (48%), Positives = 109/174 (62%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+ILE+ACIITD  L    EGP   I+  +E  DSM EWC  HH 
Sbjct:    38 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHHY 97

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGL  +   S +   EA   V+ +++KN+      L GNSVY D +F+ K+MP + +  
Sbjct:    98 NSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFMPLVDAYL 157

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
              + +VDVS+IK L  RW+P      P K   HR+LDDIRESI EL YYK N+FK
Sbjct:   158 HYRIVDVSTIKELAKRWHPAILDSAPKKSFTHRSLDDIRESIKELAYYKANLFK 211


>WB|WBGene00007429 [details] [associations]
            symbol:C08B6.8 species:6239 "Caenorhabditis elegans"
            [GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
            SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
            GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
            HOGENOM:HOG000246596 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY
            GeneTree:ENSGT00390000009255 EMBL:Z72502 PIR:T19081
            RefSeq:NP_001256185.1 ProteinModelPortal:Q17819 SMR:Q17819
            STRING:Q17819 PaxDb:Q17819 EnsemblMetazoa:C08B6.8a GeneID:179411
            KEGG:cel:CELE_C08B6.8 UCSC:C08B6.8 CTD:179411 WormBase:C08B6.8
            InParanoid:Q17819 NextBio:905276 Uniprot:Q17819
        Length = 193

 Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
 Identities = 84/173 (48%), Positives = 115/173 (66%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             ++WID EMTGL +E   + EIA I+TD +L     GPD+VIHQ KE LD+M EW +N   
Sbjct:    15 IIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRNTFH 74

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              +GL +K++ S  +  +AE +V++F+K +       +AGNS+Y+D +F+KKYMP L    
Sbjct:    75 ENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLDKFA 134

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
              +  +DVS+IK L  RWYP DY K P K+  HRA DDI ESI ELK Y+E+IF
Sbjct:   135 HYRCIDVSTIKGLVQRWYP-DY-KHPKKQCTHRAFDDIMESIAELKNYRESIF 185


>UNIPROTKB|F5GYG5 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
            GO:GO:0005739 GO:GO:0005886 GO:GO:0005730 GO:GO:0003676
            GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:17851
            ChiTaRS:REXO2 EMBL:AP002373 IPI:IPI01009259
            ProteinModelPortal:F5GYG5 SMR:F5GYG5 Ensembl:ENST00000539754
            ArrayExpress:F5GYG5 Bgee:F5GYG5 Uniprot:F5GYG5
        Length = 222

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 83/177 (46%), Positives = 110/177 (62%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH 
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHH- 101

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
                        G   ++AE + + FV++        LAGNSV+ D  FL KYMP      
Sbjct:   102 -----------G---KQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 147

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 215
              + ++DVS++K LC RWYP +Y   P K   HRALDDI ESI EL++Y+ NIFK  +
Sbjct:   148 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKI 204


>DICTYBASE|DDB_G0273741 [details] [associations]
            symbol:rexo2-2 "RNA exonuclease 2" species:44689
            "Dictyostelium discoideum" [GO:0005622 "intracellular"
            evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016070 "RNA
            metabolic process" evidence=IC] [GO:0008408 "3'-5' exonuclease
            activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
            [GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR006055
            InterPro:IPR012337 SMART:SM00479 dictyBase:DDB_G0273741
            dictyBase:DDB_G0273355 Pfam:PF00929 GO:GO:0005739
            GenomeReviews:CM000151_GR GO:GO:0003676 EMBL:AAFI02000011
            EMBL:AAFI02000009 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0016070
            GO:GO:0008408 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY
            RefSeq:XP_644487.1 RefSeq:XP_644763.1 ProteinModelPortal:Q556Y2
            STRING:Q556Y2 EnsemblProtists:DDB0305003 EnsemblProtists:DDB0305004
            GeneID:8618865 GeneID:8619111 KEGG:ddi:DDB_G0273355
            KEGG:ddi:DDB_G0273741 ProtClustDB:CLSZ2431156 Uniprot:Q556Y2
        Length = 190

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 88/183 (48%), Positives = 116/183 (63%)

Query:    30 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 89
             P+  E    +VW+DLEMTGL I  D ILE+A +ITD +L    +GP+LVIH++ E L +M
Sbjct:    10 PVINERSKRMVWVDLEMTGLDISKDVILEMAIVITDAELNVIEKGPNLVIHRSDEVLKNM 69

Query:    90 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 149
              +WC  HH  SGLT+ V +S ++  EAEK ++EFV+K+       LAGN+V+ D  FL K
Sbjct:    70 NDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGNTVHEDRRFLLK 129

Query:   150 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 209
              MP  A    + ++DVS+IK L  RWYP  Y   P K   HRAL DI ESI ELK Y+  
Sbjct:   130 EMPTFAEHLHYRIIDVSTIKELSRRWYP--YIPSPKKVCGHRALQDIEESIEELKSYRVT 187

Query:   210 IFK 212
             +FK
Sbjct:   188 VFK 190


>DICTYBASE|DDB_G0273355 [details] [associations]
            symbol:rexo2-1 "RNA exonuclease 2" species:44689
            "Dictyostelium discoideum" [GO:0005622 "intracellular"
            evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016070 "RNA
            metabolic process" evidence=IC] [GO:0008408 "3'-5' exonuclease
            activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
            [GO:0090305 "nucleic acid phosphodiester bond hydrolysis"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR006055
            InterPro:IPR012337 SMART:SM00479 dictyBase:DDB_G0273741
            dictyBase:DDB_G0273355 Pfam:PF00929 GO:GO:0005739
            GenomeReviews:CM000151_GR GO:GO:0003676 EMBL:AAFI02000011
            EMBL:AAFI02000009 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0016070
            GO:GO:0008408 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY
            RefSeq:XP_644487.1 RefSeq:XP_644763.1 ProteinModelPortal:Q556Y2
            STRING:Q556Y2 EnsemblProtists:DDB0305003 EnsemblProtists:DDB0305004
            GeneID:8618865 GeneID:8619111 KEGG:ddi:DDB_G0273355
            KEGG:ddi:DDB_G0273741 ProtClustDB:CLSZ2431156 Uniprot:Q556Y2
        Length = 190

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 88/183 (48%), Positives = 116/183 (63%)

Query:    30 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 89
             P+  E    +VW+DLEMTGL I  D ILE+A +ITD +L    +GP+LVIH++ E L +M
Sbjct:    10 PVINERSKRMVWVDLEMTGLDISKDVILEMAIVITDAELNVIEKGPNLVIHRSDEVLKNM 69

Query:    90 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 149
              +WC  HH  SGLT+ V +S ++  EAEK ++EFV+K+       LAGN+V+ D  FL K
Sbjct:    70 NDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGNTVHEDRRFLLK 129

Query:   150 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 209
              MP  A    + ++DVS+IK L  RWYP  Y   P K   HRAL DI ESI ELK Y+  
Sbjct:   130 EMPTFAEHLHYRIIDVSTIKELSRRWYP--YIPSPKKVCGHRALQDIEESIEELKSYRVT 187

Query:   210 IFK 212
             +FK
Sbjct:   188 VFK 190


>UNIPROTKB|Q9KV17 [details] [associations]
            symbol:orn "Oligoribonuclease" species:243277 "Vibrio
            cholerae O1 biovar El Tor str. N16961" [GO:0004532 "exoribonuclease
            activity" evidence=ISS] [GO:0006401 "RNA catabolic process"
            evidence=ISS] HAMAP:MF_00045 InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 GO:GO:0005737
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0006401
            InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004532 eggNOG:COG1949
            KO:K13288 OMA:LEAFFHY ProtClustDB:PRK05359 PIR:E82333
            RefSeq:NP_229995.1 ProteinModelPortal:Q9KV17 SMR:Q9KV17
            DNASU:2615077 GeneID:2615077 KEGG:vch:VC0341 PATRIC:20079739
            Uniprot:Q9KV17
        Length = 181

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 80/174 (45%), Positives = 109/174 (62%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             L+WIDLEMTGL  E+ +I+E+A I+TD +L    EGP + IHQ +  L  M EWC   H 
Sbjct:     8 LIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
             ASGL  +V  S ++E EA  Q + F+K+ V      + GNS+  D  FL K+MP L + F
Sbjct:    68 ASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
              +  +DVS+IK L  RW P   ++  SK   H ALDDIRESI EL++Y++ +FK
Sbjct:   128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180


>TIGR_CMR|VC_0341 [details] [associations]
            symbol:VC_0341 "oligoribonuclease" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0004532 "exoribonuclease activity"
            evidence=ISS] [GO:0006401 "RNA catabolic process" evidence=ISS]
            HAMAP:MF_00045 InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 GO:GO:0005737
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0006401
            InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0004532 eggNOG:COG1949
            KO:K13288 OMA:LEAFFHY ProtClustDB:PRK05359 PIR:E82333
            RefSeq:NP_229995.1 ProteinModelPortal:Q9KV17 SMR:Q9KV17
            DNASU:2615077 GeneID:2615077 KEGG:vch:VC0341 PATRIC:20079739
            Uniprot:Q9KV17
        Length = 181

 Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
 Identities = 80/174 (45%), Positives = 109/174 (62%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             L+WIDLEMTGL  E+ +I+E+A I+TD +L    EGP + IHQ +  L  M EWC   H 
Sbjct:     8 LIWIDLEMTGLDPEMHKIIEMATIVTDSELNILAEGPVIAIHQPESELAKMDEWCTTTHT 67

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
             ASGL  +V  S ++E EA  Q + F+K+ V      + GNS+  D  FL K+MP L + F
Sbjct:    68 ASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICGNSIGQDRRFLYKHMPRLEAYF 127

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
              +  +DVS+IK L  RW P   ++  SK   H ALDDIRESI EL++Y++ +FK
Sbjct:   128 HYRYIDVSTIKELTRRWQPEVLKEF-SKTGSHLALDDIRESIAELQFYRKAVFK 180


>UNIPROTKB|P0A784 [details] [associations]
            symbol:orn "oligoribonuclease monomer" species:83333
            "Escherichia coli K-12" [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0090305 "nucleic acid
            phosphodiester bond hydrolysis" evidence=IEA] [GO:0034611
            "oligoribonucleotidase activity" evidence=IDA] [GO:0000175
            "3'-5'-exoribonuclease activity" evidence=IDA] [GO:0008310
            "single-stranded DNA specific 3'-5' exodeoxyribonuclease activity"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006401
            "RNA catabolic process" evidence=IMP] HAMAP:MF_00045
            InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR022894
            SMART:SM00479 Pfam:PF00929 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
            GO:GO:0003676 GO:GO:0006401 EMBL:U14003 InterPro:IPR013520
            SUPFAM:SSF53098 GO:GO:0000175 GO:GO:0008310 HOGENOM:HOG000246596
            eggNOG:COG1949 KO:K13288 OMA:LEAFFHY ProtClustDB:PRK05359
            PIR:S56390 RefSeq:NP_418586.4 RefSeq:YP_492307.1 PDB:1YTA PDB:2IGI
            PDBsum:1YTA PDBsum:2IGI ProteinModelPortal:P0A784 SMR:P0A784
            PRIDE:P0A784 EnsemblBacteria:EBESCT00000002902
            EnsemblBacteria:EBESCT00000014870 GeneID:12932085 GeneID:948675
            KEGG:ecj:Y75_p4051 KEGG:eco:b4162 PATRIC:32123897 EchoBASE:EB2373
            EcoGene:EG12480 BioCyc:EcoCyc:G7842-MONOMER
            BioCyc:ECOL316407:JW5740-MONOMER BioCyc:MetaCyc:G7842-MONOMER
            EvolutionaryTrace:P0A784 Genevestigator:P0A784 GO:GO:0034611
            Uniprot:P0A784
        Length = 181

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 79/174 (45%), Positives = 109/174 (62%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             L+WIDLEMTGL  E DRI+EIA ++TD  L    EGP + +HQ+ E L  M +W    H 
Sbjct:     8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
             ASGL ++V  S + +REAE   +EF+K+ V      + GNS+  D  FL KYMP+L + F
Sbjct:    68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
              +  +DVS++K L  RW P       +K+  H+A+DDIRES+ EL YY+E+  K
Sbjct:   128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180


>UNIPROTKB|H0YGR4 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
            GO:GO:0005739 GO:GO:0005886 GO:GO:0005730 GO:GO:0003676
            GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:17851
            ChiTaRS:REXO2 EMBL:AP002373 Ensembl:ENST00000539119 Uniprot:H0YGR4
        Length = 192

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 70/144 (48%), Positives = 93/144 (64%)

Query:    72 VEGPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY 131
             +EGP+L+I Q  E LDSM +WC+ HH  SGLTK V  S +T ++AE + + FV++     
Sbjct:    31 LEGPNLIIKQPDELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPG 90

Query:   132 TPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHR 191
                LAGNSV+ D  FL KYMP       + ++DVS++K LC RWYP +Y   P K   HR
Sbjct:    91 LCPLAGNSVHEDKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHR 150

Query:   192 ALDDIRESIMELKYYKENIFKTNL 215
             ALDDI ESI EL++Y+ NIFK  +
Sbjct:   151 ALDDISESIKELQFYRNNIFKKKI 174


>TIGR_CMR|SO_0592 [details] [associations]
            symbol:SO_0592 "oligoribonuclease" species:211586
            "Shewanella oneidensis MR-1" [GO:0000292 "RNA fragment catabolic
            process" evidence=ISS] [GO:0008946 "oligonucleotidase activity"
            evidence=ISS] HAMAP:MF_00045 InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 GO:GO:0005737
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004527
            GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
            HOGENOM:HOG000246596 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY
            ProtClustDB:PRK05359 RefSeq:NP_716225.1 ProteinModelPortal:Q8EJ78
            SMR:Q8EJ78 GeneID:1168461 KEGG:son:SO_0592 PATRIC:23520872
            Uniprot:Q8EJ78
        Length = 181

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 76/174 (43%), Positives = 108/174 (62%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             L+WIDLEMTGL+ +VDR++EIA ++TD +L    +GP + IHQ+ E L +M +W Q HH 
Sbjct:     8 LIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDDWNQKHHG 67

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGL ++V  S + E EA  Q + F+ + V      + GNSV  D  FL +YM +L   F
Sbjct:    68 ESGLIERVRASQVNEAEAVAQTIAFLAQYVPKGVSPMCGNSVGQDRRFLNRYMRELEDYF 127

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
              +  +DVS++K L  RW P        K+  H+AL DI+ESI EL+YY+  +FK
Sbjct:   128 HYRNLDVSTVKELVKRWSPETMAGF-KKQNTHQALQDIQESIAELQYYRSKVFK 180


>TIGR_CMR|CBU_1235 [details] [associations]
            symbol:CBU_1235 "oligoribonuclease" species:227377
            "Coxiella burnetii RSA 493" [GO:0008946 "oligonucleotidase
            activity" evidence=ISS] HAMAP:MF_00045 InterPro:IPR006055
            InterPro:IPR012337 InterPro:IPR022894 SMART:SM00479 Pfam:PF00929
            GO:GO:0005737 GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
            HOGENOM:HOG000246596 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY
            ProtClustDB:PRK05359 RefSeq:NP_820230.1 PDB:3TR8 PDBsum:3TR8
            ProteinModelPortal:Q83C93 SMR:Q83C93 GeneID:1209140
            KEGG:cbu:CBU_1235 PATRIC:17931205
            BioCyc:CBUR227377:GJ7S-1222-MONOMER Uniprot:Q83C93
        Length = 183

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 80/179 (44%), Positives = 108/179 (60%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             L+W+DLEMTGL  E DRI+EIA I+T+  L    EGP   IHQ  + L +M  W  +HH 
Sbjct:     8 LIWLDLEMTGLDPERDRIIEIATIVTNSHLDILAEGPAFAIHQPDKLLTAMDNWNTSHHT 67

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
             ASGL ++V +S + E EAE   + F++K V      L GNSV  D  FL +YMP L   F
Sbjct:    68 ASGLLERVKNSSVDEVEAETLTLAFLEKYVSAGKSPLCGNSVCQDRRFLSRYMPRLNQFF 127

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 217
              +  +DV+++K L  RW P+       KE +H AL DIR+SI EL+YY+ ++   NL K
Sbjct:   128 HYRHLDVTTLKILAQRWAPQ-IAAAHIKESQHLALQDIRDSIEELRYYRAHLL--NLSK 183


>SGD|S000004049 [details] [associations]
            symbol:REX2 "3'-5' RNA exonuclease" species:4932
            "Saccharomyces cerevisiae" [GO:0000002 "mitochondrial genome
            maintenance" evidence=IGI;IMP] [GO:0005739 "mitochondrion"
            evidence=IEA;IMP;IDA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
            "exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=ISS] [GO:0000467 "exonucleolytic trimming to generate
            mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0034475 "U4
            snRNA 3'-end processing" evidence=IGI;IMP] [GO:0034476 "U5 snRNA
            3'-end processing" evidence=IGI] [GO:0004518 "nuclease activity"
            evidence=IEA] [GO:0000175 "3'-5'-exoribonuclease activity"
            evidence=IMP] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
            SGD:S000004049 Pfam:PF00929 GO:GO:0005739 GO:GO:0003676
            EMBL:BK006945 GO:GO:0000002 InterPro:IPR013520 SUPFAM:SSF53098
            GO:GO:0000175 GO:GO:0000467 EMBL:X94607 HOGENOM:HOG000246596
            GO:GO:0034475 GO:GO:0034476 eggNOG:COG1949 KO:K13288
            GeneTree:ENSGT00390000009255 OrthoDB:EOG43R6X0 EMBL:L47977
            EMBL:Z73231 EMBL:AY693005 PIR:S61633 RefSeq:NP_013160.1
            ProteinModelPortal:P54964 SMR:P54964 DIP:DIP-5084N IntAct:P54964
            MINT:MINT-549084 STRING:P54964 PaxDb:P54964 PeptideAtlas:P54964
            EnsemblFungi:YLR059C GeneID:850748 KEGG:sce:YLR059C CYGD:YLR059c
            OMA:RIIEICC NextBio:966876 Genevestigator:P54964 GermOnline:YLR059C
            Uniprot:P54964
        Length = 269

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 89/208 (42%), Positives = 124/208 (59%)

Query:    20 TLENQQN-SQTPLEFEYKM--PLVWIDLEMTGLKIEVDRILEIACIITDGKLT--KSVEG 74
             T++N Q+ +QTP E + K+  PLVWID EMTGL    DRI+EI CIITDG L   K+ +G
Sbjct:    34 TIQNLQSMAQTP-ELKTKLFKPLVWIDCEMTGLDHVNDRIIEICCIITDGHLAPVKAADG 92

Query:    75 P-----DLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVK---- 125
                   + VIH   E ++ M EWC  HH  SGLT KVL S  T  + E +++E+++    
Sbjct:    93 QGDSHYESVIHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIP 152

Query:   126 -KNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVP 184
              KNVG    +LAGNSV++D +F+ +  P +     + +VDVSSI  +  R  P    + P
Sbjct:   153 DKNVG----VLAGNSVHMDRLFMVREFPKVIDHLFYRIVDVSSIMEVARRHNPALQARNP 208

Query:   185 SKEQKHRALDDIRESIMELKYYKENIFK 212
              KE  H A  DI+ESI +L++Y +N  K
Sbjct:   209 KKEAAHTAYSDIKESIAQLQWYMDNYLK 236


>TIGR_CMR|CPS_4379 [details] [associations]
            symbol:CPS_4379 "oligoribonuclease" species:167879
            "Colwellia psychrerythraea 34H" [GO:0000292 "RNA fragment catabolic
            process" evidence=ISS] [GO:0008946 "oligonucleotidase activity"
            evidence=ISS] HAMAP:MF_00045 InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 GO:GO:0005737
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004527
            GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
            HOGENOM:HOG000246596 eggNOG:COG1949 KO:K13288 OMA:LEAFFHY
            RefSeq:YP_271028.1 HSSP:P0A784 ProteinModelPortal:Q47VZ4 SMR:Q47VZ4
            STRING:Q47VZ4 GeneID:3522950 KEGG:cps:CPS_4379 PATRIC:21471603
            ProtClustDB:PRK05359 BioCyc:CPSY167879:GI48-4388-MONOMER
            Uniprot:Q47VZ4
        Length = 181

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 80/174 (45%), Positives = 103/174 (59%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             L+W+DLEMTGL+   D ILEIA IITD +L    +GP   I QT + LD+M  WC  HH 
Sbjct:     8 LIWLDLEMTGLEPVEDVILEIAIIITDSELNILAQGPIFAISQTDDVLDNMNPWCIEHHG 67

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLT++   S ++   A K+ + FV++ V      + GNS+  D  F+ KYMPD    F
Sbjct:    68 KSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCGNSIGQDRRFINKYMPDFEDHF 127

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
              +  +DVS+IK L  RW P     V  K   H ALDDI+ESI ELK Y+E  FK
Sbjct:   128 HYRNLDVSTIKELAKRWKPEVLESVV-KTGAHLALDDIKESIAELKVYRELFFK 180


>UNIPROTKB|Q4KJ81 [details] [associations]
            symbol:orn "Oligoribonuclease" species:220664 "Pseudomonas
            protegens Pf-5" [GO:0034611 "oligoribonucleotidase activity"
            evidence=ISS] HAMAP:MF_00045 InterPro:IPR006055 InterPro:IPR012337
            InterPro:IPR022894 SMART:SM00479 Pfam:PF00929 GO:GO:0005737
            GO:GO:0003676 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0004527
            InterPro:IPR013520 SUPFAM:SSF53098 HOGENOM:HOG000246596
            eggNOG:COG1949 KO:K13288 OMA:LEAFFHY ProtClustDB:PRK05359
            GO:GO:0034611 RefSeq:YP_257702.1 ProteinModelPortal:Q4KJ81
            SMR:Q4KJ81 STRING:Q4KJ81 GeneID:3481149 KEGG:pfl:PFL_0558
            PATRIC:19870273 BioCyc:PFLU220664:GIX8-559-MONOMER Uniprot:Q4KJ81
        Length = 180

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 77/174 (44%), Positives = 105/174 (60%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             L+WIDLEMTGL  + D I+E+A I+TD  L    EGP + IHQ+ E L  M EW    H 
Sbjct:     7 LIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHQSDEILAGMDEWNTRQHG 66

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
              SGLT++V  S ++  EAE Q + F+++ V      + GNS+  D  FL ++M  L S F
Sbjct:    67 GSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMKALESYF 126

Query:   159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
              +  +DVS++K L  RW P D R    K   H ALDDIRESI EL++Y+++  K
Sbjct:   127 HYRNLDVSTLKELAARWAP-DVRDSFKKGSTHLALDDIRESIAELQHYRKHFIK 179


>UNIPROTKB|P65597 [details] [associations]
            symbol:orn "Oligoribonuclease" species:1773 "Mycobacterium
            tuberculosis" [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00045
            InterPro:IPR006055 InterPro:IPR012337 InterPro:IPR022894
            SMART:SM00479 Pfam:PF00929 GO:GO:0005737 GO:GO:0040007
            EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
            EMBL:BX842580 GO:GO:0003676 GO:GO:0004527 GO:GO:0090305
            InterPro:IPR013520 SUPFAM:SSF53098 HOGENOM:HOG000246596
            eggNOG:COG1949 KO:K13288 OMA:LEAFFHY ProtClustDB:PRK05359
            PIR:G70551 RefSeq:NP_217027.1 RefSeq:NP_337076.1
            RefSeq:YP_006515950.1 ProteinModelPortal:P65597 SMR:P65597
            PRIDE:P65597 EnsemblBacteria:EBMYCT00000003866
            EnsemblBacteria:EBMYCT00000069519 GeneID:13319226 GeneID:888633
            GeneID:925738 KEGG:mtc:MT2586 KEGG:mtu:Rv2511 KEGG:mtv:RVBD_2511
            PATRIC:18127440 TubercuList:Rv2511 Uniprot:P65597
        Length = 215

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 74/174 (42%), Positives = 101/174 (58%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
             LVWID EMTGL +  D+++EIA ++TD  L    +G D+V+H     L  M +     H 
Sbjct:     5 LVWIDCEMTGLDLGSDKLIEIAALVTDADLNILGDGVDVVMHADDAALSGMIDVVAEMHS 64

Query:    99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLASL 157
              SGL  +V  S +    AE  V++++ ++V    T  LAGNS+  D  F+ + MP L S 
Sbjct:    65 RSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAGNSIATDRAFIARDMPTLDSF 124

Query:   158 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
               + ++DVSSIK LC RWYPR Y   P K   HRAL DI ESI EL++Y+   F
Sbjct:   125 LHYRMIDVSSIKELCRRWYPRIYFGQPPKGLTHRALADIHESIRELRFYRRTAF 178


>POMBASE|SPBC1347.07 [details] [associations]
            symbol:rex2 "RNA exonuclease (predicted)" species:4896
            "Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005739 "mitochondrion" evidence=ISS] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISS]
            [GO:0008408 "3'-5' exonuclease activity" evidence=ISS]
            InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
            PomBase:SPBC1347.07 Pfam:PF00929 GO:GO:0005829 GO:GO:0005739
            GO:GO:0005634 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
            InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408 GO:GO:0006364
            HOGENOM:HOG000246596 eggNOG:COG1949 PIR:T39395 RefSeq:NP_596699.2
            STRING:O94626 GeneID:2539853 OrthoDB:EOG43R6X0 NextBio:20801000
            Uniprot:O94626
        Length = 252

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 74/175 (42%), Positives = 105/175 (60%)

Query:    36 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 95
             K PLVWID EMTGL++    ++E+A IITDG L    E  D VI   ++ L  M +WC  
Sbjct:    77 KQPLVWIDCEMTGLEVGKHVLMEVAAIITDGNLRPVEEKFDAVIKLDEKQLSEMNDWCIE 136

Query:    96 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP-LLAGNSVYVDFMFLKKYMPDL 154
              H  SGLT++   S LT ++ E Q++ ++KK +      L+AGNSV+ D  FL   MP +
Sbjct:   137 QHGKSGLTERCRQSNLTVKDVENQLLAYIKKYIPKKREALIAGNSVHADVRFLSVEMPKI 196

Query:   155 ASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQK--HRALDDIRESIMELKYYK 207
                  + ++DVS+IK L  RW P     +P+ ++K  HRAL DI ESI EL++Y+
Sbjct:   197 IEHLHYRIIDVSTIKELAKRWCP----DIPAYDKKGDHRALSDILESIGELQHYR 247


>ASPGD|ASPL0000041574 [details] [associations]
            symbol:AN10348 species:162425 "Emericella nidulans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000002
            "mitochondrial genome maintenance" evidence=IEA] [GO:0034476 "U5
            snRNA 3'-end processing" evidence=IEA] [GO:0000467 "exonucleolytic
            trimming to generate mature 3'-end of 5.8S rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0034475 "U4 snRNA 3'-end processing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000175
            "3'-5'-exoribonuclease activity" evidence=IEA] InterPro:IPR006055
            InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 EMBL:BN001306
            GO:GO:0003676 GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520
            SUPFAM:SSF53098 HOGENOM:HOG000246596 OMA:LEAFFHY
            ProteinModelPortal:C8VJB6 EnsemblFungi:CADANIAT00010222
            Uniprot:C8VJB6
        Length = 194

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 78/179 (43%), Positives = 105/179 (58%)

Query:    38 PLVWIDLEMTGLKIEVDRILEIACIITDGKLTK-SVEGPDLVIHQTKECLDSMGEWCQNH 96
             PLVWID EMTGL    D IL+I C ITD  L      G + VIH  +  LDSM +WC + 
Sbjct:     9 PLVWIDCEMTGLDPTTDHILQICCFITDADLNLLDATGFEAVIHVPQSALDSMSQWCIDT 68

Query:    97 HEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGT-YTPLLAGNSVYVDFMFLKKYMPDLA 155
             H  +GLT++V +S +T   A   ++ ++K+ +    T LLAGNSV+ D  FL    P  A
Sbjct:    69 HGRTGLTQRVQNSTVTPEAAAADLLAYIKRYIPKPRTALLAGNSVHADKAFLA-CGPYAA 127

Query:   156 SL-FSHV-LVDVSSIKALCMRWYPRDYRK-VPSKEQKHRALDDIRESIMELKYYKENIF 211
              L + H  +VDVS+IK +  RW        VP K++ H A +DI ESI E+K+YKE +F
Sbjct:   128 ILEWLHYRIVDVSTIKEVVRRWGGEGLLSAVPPKKEVHEAREDILESIEEMKFYKEQLF 186


>CGD|CAL0004656 [details] [associations]
            symbol:REX2 species:5476 "Candida albicans" [GO:0000175
            "3'-5'-exoribonuclease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000002
            "mitochondrial genome maintenance" evidence=IEA] [GO:0034476 "U5
            snRNA 3'-end processing" evidence=IEA] [GO:0000467 "exonucleolytic
            trimming to generate mature 3'-end of 5.8S rRNA from tricistronic
            rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0034475 "U4 snRNA 3'-end processing" evidence=IEA]
            InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 CGD:CAL0004656
            Pfam:PF00929 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
            InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AACQ01000008
            EMBL:AACQ01000007 eggNOG:COG1949 KO:K13288 RefSeq:XP_722377.1
            RefSeq:XP_722516.1 ProteinModelPortal:Q5ALW0 STRING:Q5ALW0
            GeneID:3635783 GeneID:3635981 KEGG:cal:CaO19.1466
            KEGG:cal:CaO19.9041 Uniprot:Q5ALW0
        Length = 255

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 77/182 (42%), Positives = 102/182 (56%)

Query:    36 KMPLVWIDLEMTGLKI-EVDRILEIACIITDGKLTKSVE-GPDLVIHQTKECLDSMGEWC 93
             K PLVW+D EMTGL +   D I+EI CIIT+  L    E G +  I+  K  LD M EWC
Sbjct:    44 KKPLVWVDCEMTGLDVFGDDNIIEICCIITNEDLDIVDENGYESTIYYPKSRLDKMNEWC 103

Query:    94 QNHHEASGLTKKVLHSGLTEREA-EKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYM 151
                H  SGLT K+L +   +    E +++E++KK V    T LLAGNSVY+D  F+ K  
Sbjct:   104 IETHGKSGLTDKILANPDRKLSVVEDELLEYIKKYVPEVRTGLLAGNSVYMDRFFMMKEF 163

Query:   152 PDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
             P +     +  VDVSSI     R  P+  +  P K   H A  DI ESI +LK+Y++  F
Sbjct:   164 PKVIDHLHYRNVDVSSIMEFGYRHNPKLMKMFPKKTGAHTAKSDILESIEQLKWYRKYYF 223

Query:   212 KT 213
             K+
Sbjct:   224 KS 225


>UNIPROTKB|H0YG83 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005730 GO:GO:0003676 InterPro:IPR013520
            SUPFAM:SSF53098 HGNC:HGNC:17851 ChiTaRS:REXO2 EMBL:AP002373
            Ensembl:ENST00000538403 Uniprot:H0YG83
        Length = 154

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 55/118 (46%), Positives = 74/118 (62%)

Query:    98 EASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASL 157
             + SGLTK V  S +T ++AE + + FV++        LAGNSV+ D  FL KYMP     
Sbjct:    19 DKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKH 78

Query:   158 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 215
               + ++DVS++K LC RWYP +Y   P K   HRALDDI ESI EL++Y+ NIFK  +
Sbjct:    79 LHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKI 136


>UNIPROTKB|F5GX07 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005730 GO:GO:0003676 InterPro:IPR013520
            SUPFAM:SSF53098 HGNC:HGNC:17851 ChiTaRS:REXO2 EMBL:AP002373
            IPI:IPI01012069 ProteinModelPortal:F5GX07 SMR:F5GX07
            Ensembl:ENST00000538791 ArrayExpress:F5GX07 Bgee:F5GX07
            Uniprot:F5GX07
        Length = 147

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 55/116 (47%), Positives = 73/116 (62%)

Query:   100 SGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLFS 159
             SGLTK V  S +T ++AE + + FV++        LAGNSV+ D  FL KYMP       
Sbjct:    14 SGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHLH 73

Query:   160 HVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 215
             + ++DVS++K LC RWYP +Y   P K   HRALDDI ESI EL++Y+ NIFK  +
Sbjct:    74 YRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIFKKKI 129


>UNIPROTKB|H0YH58 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005730 GO:GO:0003676 InterPro:IPR013520
            SUPFAM:SSF53098 HGNC:HGNC:17851 ChiTaRS:REXO2 EMBL:AP002373
            Ensembl:ENST00000539788 Bgee:H0YH58 Uniprot:H0YH58
        Length = 111

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 40/78 (51%), Positives = 51/78 (65%)

Query:   138 NSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIR 197
             NSV+ D  FL KYMP       + ++DVS++K LC RWYP +Y   P K   HRALDDI 
Sbjct:    16 NSVHEDKKFLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDIS 75

Query:   198 ESIMELKYYKENIFKTNL 215
             ESI EL++Y+ NIFK  +
Sbjct:    76 ESIKELQFYRNNIFKKKI 93


>UNIPROTKB|F5H784 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676
            InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:17851 ChiTaRS:REXO2
            EMBL:AP002373 IPI:IPI01010096 ProteinModelPortal:F5H784 SMR:F5H784
            Ensembl:ENST00000541703 ArrayExpress:F5H784 Bgee:F5H784
            Uniprot:F5H784
        Length = 121

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 35/59 (59%), Positives = 45/59 (76%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 97
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHH 101


>UNIPROTKB|H0YF66 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR012337 GO:GO:0003676 SUPFAM:SSF53098
            HGNC:HGNC:17851 ChiTaRS:REXO2 EMBL:AP002373 Ensembl:ENST00000546316
            Bgee:H0YF66 Uniprot:H0YF66
        Length = 67

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 26/47 (55%), Positives = 34/47 (72%)

Query:    51 IEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHH 97
             IE D+I+E+AC+ITD  L    EGP+L+I Q  E LDSM +WC+ HH
Sbjct:     1 IEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHH 47


>UNIPROTKB|Q9BTR4 [details] [associations]
            symbol:REXO2 "REXO2 protein" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR012337
            Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
            UniGene:Hs.677190 UniGene:Hs.714231 HGNC:HGNC:17851 ChiTaRS:REXO2
            EMBL:AP002373 EMBL:BC003502 IPI:IPI01009750 HSSP:P45340 SMR:Q9BTR4
            STRING:Q9BTR4 Ensembl:ENST00000539275 UCSC:uc001poz.3
            Uniprot:Q9BTR4
        Length = 79

 Score = 119 (46.9 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEG 74
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EG
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEG 78


>UNIPROTKB|F1SJV8 [details] [associations]
            symbol:REXO2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR012337
            Pfam:PF00929 GO:GO:0005739 GO:GO:0005886 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0008408
            GeneTree:ENSGT00390000009255 EMBL:CU856090
            Ensembl:ENSSSCT00000016422 Uniprot:F1SJV8
        Length = 79

 Score = 119 (46.9 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 22/36 (61%), Positives = 28/36 (77%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEG 74
             +VW+DLEMTGL IE D+I+E+AC+ITD  L    EG
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEG 78


>UNIPROTKB|F5H6P8 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676
            InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:17851 ChiTaRS:REXO2
            EMBL:AP002373 IPI:IPI01012443 ProteinModelPortal:F5H6P8 SMR:F5H6P8
            Ensembl:ENST00000544196 ArrayExpress:F5H6P8 Bgee:F5H6P8
            Uniprot:F5H6P8
        Length = 85

 Score = 113 (44.8 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 20/30 (66%), Positives = 26/30 (86%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKL 68
             +VW+DLEMTGL IE D+I+E+AC+ITD  L
Sbjct:    43 MVWVDLEMTGLDIEKDQIIEMACLITDSDL 72


>UNIPROTKB|H0YG37 [details] [associations]
            symbol:REXO2 "Oligoribonuclease, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676
            InterPro:IPR013520 SUPFAM:SSF53098 HGNC:HGNC:17851 ChiTaRS:REXO2
            EMBL:AP002373 Ensembl:ENST00000538198 Uniprot:H0YG37
        Length = 90

 Score = 113 (44.8 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 20/30 (66%), Positives = 26/30 (86%)

Query:    39 LVWIDLEMTGLKIEVDRILEIACIITDGKL 68
             +VW+DLEMTGL IE D+I+E+AC+ITD  L
Sbjct:    38 MVWVDLEMTGLDIEKDQIIEMACLITDSDL 67


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.132   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      217       217   0.00090  112 3  11 22  0.40    33
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  37
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  181 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.74u 0.17s 20.91t   Elapsed:  00:00:01
  Total cpu time:  20.74u 0.17s 20.91t   Elapsed:  00:00:01
  Start:  Tue May 21 01:53:44 2013   End:  Tue May 21 01:53:45 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT2G26970 AT2G26970 AT2G26970	protein from Arabidopsis thaliana	1.7e-73
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Uncharacterized protein	protein from Gallus gallus	6.2e-46
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Bos taurus	1.3e-45
BLAST match view associations BLAST with Rexo2 Rexo2 Rexo2 REX2, RNA exonuclease 2 homolog (S. cerevisiae)	protein from Mus musculus	2.1e-45
BLAST match view associations BLAST with Rexo2 Rexo2 Rexo2 REX2, RNA exonuclease 2 homolog (S. cerevisiae)	gene from Rattus norvegicus	2.1e-45
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-45
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	2.7e-45
BLAST match view associations BLAST with smfn smfn smfn small fragment nuclease	gene_product from Danio rerio	3.1e-44
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	1.1e-41
BLAST match view associations BLAST with CG10214 CG10214 CG10214	protein from Drosophila melanogaster	3.3e-40
BLAST match view associations BLAST with C08B6.8 C08B6.8 C08B6.8	gene from Caenorhabditis elegans	1.1e-39
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	2.1e-38
BLAST match view associations BLAST with rexo2-2 rexo2-2 rexo2-2 RNA exonuclease 2	gene from Dictyostelium discoideum	5.5e-38
BLAST match view associations BLAST with rexo2-1 rexo2-1 rexo2-1 RNA exonuclease 2	gene from Dictyostelium discoideum	5.5e-38
BLAST match view associations BLAST with orn orn orn Oligoribonuclease	protein from Vibrio cholerae O1 biovar El Tor str. N16961	1.1e-34
BLAST match view associations BLAST with VC_0341 VC_0341 VC_0341 oligoribonuclease	protein from Vibrio cholerae O1 biovar El Tor	1.1e-34
BLAST match view associations BLAST with orn orn orn oligoribonuclease monomer	protein from Escherichia coli K-12	1.3e-34
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	5.8e-34
BLAST match view associations BLAST with SO_0592 SO_0592 SO_0592 oligoribonuclease	protein from Shewanella oneidensis MR-1	7.4e-34
BLAST match view associations BLAST with CBU_1235 CBU_1235 CBU_1235 oligoribonuclease	protein from Coxiella burnetii RSA 493	1.5e-33
BLAST match view associations BLAST with REX2 REX2 REX2 3'-5' RNA exonuclease	gene from Saccharomyces cerevisiae	3.2e-33
BLAST match view associations BLAST with CPS_4379 CPS_4379 CPS_4379 oligoribonuclease	protein from Colwellia psychrerythraea 34H	8.5e-33
BLAST match view associations BLAST with orn orn orn Oligoribonuclease	protein from Pseudomonas protegens Pf-5	1.4e-32
BLAST match view associations BLAST with orn orn orn Oligoribonuclease	protein from Mycobacterium tuberculosis	1.4e-30
BLAST match view associations BLAST with REX2 REX2 REX2	gene_product from Candida albicans	1.3e-27
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	2.6e-24
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	3.3e-24
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	3.6e-18
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	2.9e-16
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	1.5e-10
BLAST match view associations BLAST with REXO2 REXO2 REXO2 REXO2 protein	protein from Homo sapiens	3.0e-07
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Uncharacterized protein	protein from Sus scrofa	3.0e-07
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	1.5e-06
BLAST match view associations BLAST with REXO2 REXO2 REXO2 Oligoribonuclease, mitochondrial	protein from Homo sapiens	1.5e-06