BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 027892
(217 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVE0|ORN_ARATH Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2
Length = 222
Score = 298 bits (763), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 169/200 (84%), Gaps = 1/200 (0%)
Query: 15 SSSNLTLENQQNSQTPLE-FEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVE 73
+SS+ T + +++ LE +YK PLVWIDLEMTGL +EVDRILEIACIIT+G LT+SVE
Sbjct: 21 ASSSSTGKQEESVNGSLEDGDYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVE 80
Query: 74 GPDLVIHQTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTP 133
GPDLV+ QTK+CLD M +WCQ HH ASGLTKKVL S +TEREAE++V+EFVKK+VG+ P
Sbjct: 81 GPDLVVRQTKDCLDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNP 140
Query: 134 LLAGNSVYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRAL 193
LLAGNSVYVDF+FLKKYMP+LA+LF H+LVDVSS+KALC RW+P + RK P+K+ HRA+
Sbjct: 141 LLAGNSVYVDFLFLKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAM 200
Query: 194 DDIRESIMELKYYKENIFKT 213
DDIRESI ELKYYK+ IFK
Sbjct: 201 DDIRESIKELKYYKKTIFKA 220
>sp|A2VE52|ORN_BOVIN Oligoribonuclease, mitochondrial OS=Bos taurus GN=REXO2 PE=2 SV=1
Length = 237
Score = 190 bits (482), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMKHL 162
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>sp|Q5U1X1|ORN_RAT Oligoribonuclease, mitochondrial OS=Rattus norvegicus GN=Rexo2 PE=2
SV=1
Length = 237
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>sp|Q9D8S4|ORN_MOUSE Oligoribonuclease, mitochondrial OS=Mus musculus GN=Rexo2 PE=1 SV=2
Length = 237
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL K+MP
Sbjct: 103 KSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKHMPQFMKHL 162
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ ++DVS++K LC RWYP DY P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>sp|Q9Y3B8|ORN_HUMAN Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3
Length = 237
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 116/173 (67%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
+VW+DLEMTGL IE D+I+E+AC+ITD L EGP+L+I Q E LDSM +WC+ HH
Sbjct: 43 MVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMSDWCKEHHG 102
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGLTK V S +T ++AE + + FV++ LAGNSV+ D FL KYMP
Sbjct: 103 KSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKYMPQFMKHL 162
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ ++DVS++K LC RWYP +Y P K HRALDDI ESI EL++Y+ NIF
Sbjct: 163 HYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNIF 215
>sp|Q9VCI0|ORN_DROME Probable oligoribonuclease OS=Drosophila melanogaster GN=CG10214
PE=1 SV=1
Length = 211
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 109/174 (62%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
+VW+DLEMTGL IE D+ILE+ACIITD L EGP I+ +E DSM EWC HH
Sbjct: 38 IVWMDLEMTGLDIEKDKILEVACIITDQDLNVKSEGPCFAINHPQEVYDSMNEWCMKHHY 97
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL + S + EA V+ +++KN+ L GNSVY D +F+ K+MP + +
Sbjct: 98 NSGLIDRCKSSDVNLEEASNLVLSYLEKNIPKRACPLGGNSVYTDRLFIMKFMPLVDAYL 157
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +VDVS+IK L RW+P P K HR+LDDIRESI EL YYK N+FK
Sbjct: 158 HYRIVDVSTIKELAKRWHPAILDSAPKKSFTHRSLDDIRESIKELAYYKANLFK 211
>sp|P57885|ORN_PASMU Oligoribonuclease OS=Pasteurella multocida (strain Pm70) GN=orn
PE=3 SV=1
Length = 184
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Query: 36 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 95
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L IHQ+ ECL M +WC
Sbjct: 5 KQNLIWIDLEMTGLDPESERIIEIATIVTDKHLNILAEGPVLAIHQSDECLAKMNDWCMK 64
Query: 96 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 155
H +GL ++V +S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA
Sbjct: 65 THTENGLVERVKNSRLTERAAELQTLDFLKKWVPKGVSPICGNSVSQDKRFLFKYMPELA 124
Query: 156 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNL 215
F + +DVS++K L RW P D K +K+ H ALDDIRESI EL YY+E+ NL
Sbjct: 125 DYFHYRHLDVSTLKELASRWKP-DVLKGFTKKNTHLALDDIRESIAELAYYREHFI--NL 181
Query: 216 K 216
K
Sbjct: 182 K 182
>sp|A5UFF2|ORN_HAEIG Oligoribonuclease OS=Haemophilus influenzae (strain PittGG) GN=orn
PE=3 SV=1
Length = 182
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 36 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 95
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 96 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 155
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 156 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 214
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>sp|A5UBG1|ORN_HAEIE Oligoribonuclease OS=Haemophilus influenzae (strain PittEE) GN=orn
PE=3 SV=1
Length = 182
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 36 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 95
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 96 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 155
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 156 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 214
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>sp|Q4QJM8|ORN_HAEI8 Oligoribonuclease OS=Haemophilus influenzae (strain 86-028NP)
GN=orn PE=3 SV=1
Length = 182
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 36 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 95
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 96 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 155
H +GL ++V S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 156 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 214
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>sp|P45340|ORN_HAEIN Oligoribonuclease OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=orn PE=1 SV=1
Length = 182
Score = 167 bits (423), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 36 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 95
K L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L+ M +WCQ
Sbjct: 5 KQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQK 64
Query: 96 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 155
H +GL +++ S LTER AE Q ++F+KK V + GNS+ D FL KYMPDLA
Sbjct: 65 THSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLA 124
Query: 156 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 214
F + +DVS++K L RW P KE H ALDDIRESI EL YY+E+ K +
Sbjct: 125 DYFHYRHLDVSTLKELAARWKPEILEGF-KKENTHLALDDIRESIKELAYYREHFMKLD 182
>sp|Q17819|ORN_CAEEL Probable oligoribonuclease OS=Caenorhabditis elegans GN=C08B6.8
PE=3 SV=1
Length = 193
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
++WID EMTGL +E + EIA I+TD +L GPD+VIHQ KE LD+M EW +N
Sbjct: 15 IIWIDCEMTGLDVEKQTLCEIALIVTDSELNTIATGPDIVIHQPKEVLDNMEEWPRNTFH 74
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
+GL +K++ S + +AE +V++F+K + +AGNS+Y+D +F+KKYMP L
Sbjct: 75 ENGLMEKIIASKYSMADAENEVIDFLKLHALPGKSPIAGNSIYMDRLFIKKYMPKLDKFA 134
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ +DVS+IK L RWYP DY+ P K+ HRA DDI ESI ELK Y+E+IF
Sbjct: 135 HYRCIDVSTIKGLVQRWYP-DYKH-PKKQCTHRAFDDIMESIAELKNYRESIF 185
>sp|A1U4D2|ORN_MARAV Oligoribonuclease OS=Marinobacter aquaeolei (strain ATCC 700491 /
DSM 11845 / VT8) GN=orn PE=3 SV=1
Length = 180
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E +RI+E+A IITD +L EGP + IHQ L+ M EWC H
Sbjct: 7 LIWIDLEMTGLDPEQERIIEMASIITDSQLNIVAEGPVIAIHQPDSLLEQMDEWCTRTHG 66
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
ASGLT++V S ++E EAE+Q +EF+ K++ L GNS+ D FL KYMP L + F
Sbjct: 67 ASGLTQRVKESTISEAEAEQQTLEFLGKHLEPGQSPLCGNSIGQDRRFLVKYMPKLEAFF 126
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P D + K+ H ALDDIR+SI EL++Y+++ FK
Sbjct: 127 HYRNLDVSTVKELARRWRP-DVLEGVKKQGSHLALDDIRDSINELRHYRDHFFK 179
>sp|Q7MGZ7|ORN_VIBVY Oligoribonuclease OS=Vibrio vulnificus (strain YJ016) GN=orn PE=3
SV=2
Length = 181
Score = 164 bits (415), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL +V +I+EIA I+TD +L EGP L IHQ++E L M EWC N H
Sbjct: 8 LIWIDLEMTGLDPDVHKIIEIASIVTDSELNILAEGPVLAIHQSEEELAKMDEWCTNTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL ++V S +TE+EA +Q + F++K V + GNS+ D FL ++MP+L F
Sbjct: 68 GSGLVERVRGSQITEQEAVEQTIAFLEKWVPKGVSPICGNSIGQDRRFLYRHMPELEGYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P + K SK+ H ALDDIRESI ELK+Y++ IFK
Sbjct: 128 HYRYIDVSTLKELTRRWNP-EVLKGFSKQGTHLALDDIRESIAELKFYRQTIFK 180
>sp|Q8DCV6|ORN_VIBVU Oligoribonuclease OS=Vibrio vulnificus (strain CMCP6) GN=orn PE=3
SV=2
Length = 181
Score = 164 bits (415), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL +V +I+EIA I+TD +L EGP L IHQ++E L M EWC N H
Sbjct: 8 LIWIDLEMTGLDPDVHKIIEIASIVTDSELNILAEGPVLAIHQSEEELAKMDEWCTNTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL ++V S +TE+EA +Q + F++K V + GNS+ D FL ++MP+L F
Sbjct: 68 GSGLVERVRGSQITEQEAVEQTIAFLEKWVPKGVSPICGNSIGQDRRFLYRHMPELEGYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P + K SK+ H ALDDIRESI ELK+Y++ IFK
Sbjct: 128 HYRYIDVSTLKELTRRWNP-EVLKGFSKQGTHLALDDIRESIAELKFYRQTIFK 180
>sp|Q8NMU1|ORN_CORGL Oligoribonuclease OS=Corynebacterium glutamicum (strain ATCC 13032
/ DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=orn
PE=3 SV=1
Length = 219
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 118/192 (61%), Gaps = 1/192 (0%)
Query: 21 LENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIH 80
+ +N+ TP LVW+DLEMTGL ++ I+E+A ++TD L EG DLV+H
Sbjct: 1 MSESENNTTPAVAARDDRLVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVH 60
Query: 81 QTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNS 139
T+E L M ++ N HE+SGLT+++ S +T +EAE V+ ++K+ P LAGNS
Sbjct: 61 ATEEELAQMDDFVTNMHESSGLTEQIRESAVTLKEAEDAVLALIEKHCDPAHPAPLAGNS 120
Query: 140 VYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRES 199
+ D F++++MP L + +VDVSS+K L RWYPR Y K P K HRAL DI ES
Sbjct: 121 IATDRAFIREHMPRLDEALHYRMVDVSSVKELARRWYPRVYYKQPEKGLAHRALADIVES 180
Query: 200 IMELKYYKENIF 211
I EL YY+ + F
Sbjct: 181 IRELDYYRRSFF 192
>sp|Q7VNN8|ORN_HAEDU Oligoribonuclease OS=Haemophilus ducreyi (strain 35000HP / ATCC
700724) GN=orn PE=3 SV=1
Length = 183
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL DRI+EIA I+TD L +GP L +HQ L M EWC H
Sbjct: 9 LIWIDLEMTGLDPNQDRIIEIATIVTDKDLNILAKGPVLAVHQPNTLLSKMNEWCIKTHT 68
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
A+GL ++V S LTER AE Q ++F+K+ V + + GNSV D FL +YMPDLA F
Sbjct: 69 ANGLIERVKQSKLTERAAELQTLDFLKQWVMKGSSPICGNSVAQDKRFLYQYMPDLADYF 128
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P ++ SK+ H ALDDIRESI ELK+Y+E+ K
Sbjct: 129 HYRHLDVSTLKELARRWKPEILQQF-SKKNSHLALDDIRESIEELKFYREHFIK 181
>sp|Q87L01|ORN_VIBPA Oligoribonuclease OS=Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633) GN=orn PE=3 SV=1
Length = 181
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELAKMDDWCTNTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
ASGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 ASGLVERVRNSKISEQDAVAQTIEFLEKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>sp|A1WTK7|ORN_HALHL Oligoribonuclease OS=Halorhodospira halophila (strain DSM 244 /
SL1) GN=orn PE=3 SV=1
Length = 183
Score = 162 bits (410), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL DRI+EIA ++TD L EGP L IHQ + LDSM EW H
Sbjct: 8 LIWIDLEMTGLDPSRDRIIEIAVVVTDSNLDTLAEGPVLAIHQDRSLLDSMDEWNTRQHG 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGLT++V S +TE EAE QV+ F+K+ V T + GNS+ D FL ++MPDL + F
Sbjct: 68 RSGLTERVRASTVTEAEAEAQVLAFLKQYVPARTSPMCGNSICQDRRFLARWMPDLEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P V K H ALDDIR+SI EL++Y+ +
Sbjct: 128 HYRHIDVSTLKELARRWSPEVAEGV-RKSGNHLALDDIRDSIHELRHYRREFLR 180
>sp|A6VN13|ORN_ACTSZ Oligoribonuclease OS=Actinobacillus succinogenes (strain ATCC 55618
/ 130Z) GN=orn PE=3 SV=1
Length = 182
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ + LD M +WC H
Sbjct: 8 LIWIDLEMTGLDPEQERIIEIATIVTDKNLNILAEGPVLAVHQPNQLLDKMSDWCIKTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
A+GL ++V S LTER AE Q ++F+K V + GNSV D FL KYMPDLA F
Sbjct: 68 ANGLVERVKASKLTERAAELQTIDFLKLWVPKGASPICGNSVAQDKRFLFKYMPDLADYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 214
+ +DVS++K L RW P + K H ALDDIRESI EL YY+E+ K +
Sbjct: 128 HYRHLDVSTLKELARRWKP-EISDGFQKANTHLALDDIRESIKELAYYREHFIKLD 182
>sp|Q556Y2|ORN_DICDI Probable oligoribonuclease OS=Dictyostelium discoideum GN=rexo2-1
PE=3 SV=1
Length = 190
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 2/183 (1%)
Query: 30 PLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSM 89
P+ E +VW+DLEMTGL I D ILE+A +ITD +L +GP+LVIH++ E L +M
Sbjct: 10 PVINERSKRMVWVDLEMTGLDISKDVILEMAIVITDAELNVIEKGPNLVIHRSDEVLKNM 69
Query: 90 GEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKK 149
+WC HH SGLT+ V +S ++ EAEK ++EFV+K+ LAGN+V+ D FL K
Sbjct: 70 NDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGNTVHEDRRFLLK 129
Query: 150 YMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKEN 209
MP A + ++DVS+IK L RWYP Y P K HRAL DI ESI ELK Y+
Sbjct: 130 EMPTFAEHLHYRIIDVSTIKELSRRWYP--YIPSPKKVCGHRALQDIEESIEELKSYRVT 187
Query: 210 IFK 212
+FK
Sbjct: 188 VFK 190
>sp|Q5P0T5|ORN_AROAE Oligoribonuclease OS=Aromatoleum aromaticum (strain EbN1) GN=orn
PE=3 SV=1
Length = 183
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+W+D+EMTGL+ + DRI+EIA +ITD +L E P + +HQ LD+M EW +N H
Sbjct: 8 LIWLDMEMTGLQPDSDRIIEIAIVITDSQLNTVAEAPVIAVHQPDSVLDAMDEWNRNTHG 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGLT +V S + E +AE Q++ F++++V +T + GNS+ D F+ +YMP L + F
Sbjct: 68 KSGLTDRVKASLIGEADAEAQMLAFLQQHVPAHTSPMCGNSICQDRRFMARYMPHLEAWF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P Y+ V K+ KH AL DIRESI EL++Y++N +
Sbjct: 128 HYRNLDVSTLKELAKRWRPEVYKGV-EKKGKHEALADIRESIAELRHYRDNFLR 180
>sp|A4QGM5|ORN_CORGB Oligoribonuclease OS=Corynebacterium glutamicum (strain R) GN=orn
PE=3 SV=1
Length = 219
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 117/192 (60%), Gaps = 1/192 (0%)
Query: 21 LENQQNSQTPLEFEYKMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIH 80
+ +N+ TP LVW+DLEMTGL ++ I+E+A ++TD L EG DLV+H
Sbjct: 1 MSESENNTTPAVAARDDRLVWVDLEMTGLDLKRHVIVEVAALVTDANLNVLGEGVDLVVH 60
Query: 81 QTKECLDSMGEWCQNHHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPL-LAGNS 139
T+E L M ++ N HE+SGLT+++ S +T +EAE V+ ++K+ P LAGNS
Sbjct: 61 ATEEELAQMDDFVTNMHESSGLTEQIRESAVTLKEAEDAVLALIEKHCDPAHPAPLAGNS 120
Query: 140 VYVDFMFLKKYMPDLASLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRES 199
+ D F+++ MP L + +VDVSS+K L RWYPR Y K P K HRAL DI ES
Sbjct: 121 IATDRAFIREQMPRLDEALHYRMVDVSSVKELARRWYPRVYYKQPEKGLAHRALADIVES 180
Query: 200 IMELKYYKENIF 211
I EL YY+ + F
Sbjct: 181 IRELDYYRRSFF 192
>sp|Q0SGU7|ORN_RHOSR Oligoribonuclease OS=Rhodococcus sp. (strain RHA1) GN=orn PE=3 SV=1
Length = 199
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
LVWID EMTGL++ D+++EIA ++TD +L EG D+VIH + L +M + HE
Sbjct: 5 LVWIDCEMTGLRLGTDKLIEIAALVTDSELNVLGEGVDIVIHADDDALAAMPDVVTKMHE 64
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTY-TPLLAGNSVYVDFMFLKKYMPDLASL 157
SGLT +V S +T EAE+QV+ +++++V T LAGNS+ D F+ + MPDL +
Sbjct: 65 NSGLTDEVRKSTVTLAEAEQQVLAYIREHVPVAGTAPLAGNSIATDRGFIARDMPDLDTY 124
Query: 158 FSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ ++DVSSIK L RWYPR Y P K HRAL DIRESI ELKYY++ F
Sbjct: 125 LHYRMIDVSSIKELSRRWYPRIYFGQPEKGLAHRALADIRESIRELKYYRKTAF 178
>sp|Q65SE1|ORN_MANSM Oligoribonuclease OS=Mannheimia succiniciproducens (strain MBEL55E)
GN=orn PE=3 SV=1
Length = 186
Score = 160 bits (405), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 109/176 (61%), Gaps = 1/176 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E +RI+EIA I+TD L EGP L +HQ+ E L M +WC H
Sbjct: 8 LIWIDLEMTGLDPENERIIEIATIVTDKDLNILAEGPVLAVHQSDELLAKMSDWCIKTHS 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
A+GL +V S LTER AE Q ++F+KK V + GNSV D FL KYMP+LA F
Sbjct: 68 ANGLVDRVKASKLTERAAELQTIDFLKKWVPKGASPICGNSVAQDKRFLFKYMPELADYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 214
+ +DVS++K L RW P K+ H ALDDIRESI EL YY+++ K +
Sbjct: 128 HYRHLDVSTLKELARRWKPELLNGF-EKKNTHLALDDIRESIAELAYYRDHFIKLD 182
>sp|A7MZ48|ORN_VIBHB Oligoribonuclease OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120)
GN=orn PE=3 SV=1
Length = 181
Score = 160 bits (404), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+W+DLEMTGL E +I+EIA I+TD +L EGP L +HQ +E L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPETHKIIEIASIVTDSELNILAEGPVLAVHQPEEELVKMDDWCTNTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
+SGL ++V +S ++E++A Q +EF++K V + GNS+ D FL K+MP+L F
Sbjct: 68 SSGLVERVRNSDVSEQDAVAQTIEFLEKWVPKGVSPICGNSIGQDRRFLYKHMPELEEYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P SK+ H ALDDIRESI ELKYY+E IFK
Sbjct: 128 HYRYLDVSTLKELTRRWKPEVLDGF-SKQGTHLALDDIRESIAELKYYRETIFK 180
>sp|Q0VME0|ORN_ALCBS Oligoribonuclease OS=Alcanivorax borkumensis (strain SK2 / ATCC
700651 / DSM 11573) GN=orn PE=3 SV=1
Length = 181
Score = 160 bits (404), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA I+TD +L EGP L +HQ+ LD M EW HH
Sbjct: 8 LIWIDLEMTGLSPENDRIIEIATIVTDAELNVLAEGPVLAVHQSDALLDGMDEWNTTHHN 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL +V S + + AE Q + F+++ V + GNS+ D FL YMP L + F
Sbjct: 68 NSGLVARVKASTVNDAAAESQTIAFLEQYVEAGMSPMCGNSICQDRRFLANYMPKLEAFF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ +DVS++K L RW P D SKE KH ALDDIRESI EL YY+E+
Sbjct: 128 HYRNLDVSTLKELARRWKP-DILPGFSKENKHLALDDIRESIAELVYYREHFI 179
>sp|Q5WT59|ORN_LEGPL Oligoribonuclease OS=Legionella pneumophila (strain Lens) GN=orn
PE=3 SV=1
Length = 187
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL+ E DRI+E+A I+TD +L EGP + + Q K LDSM W H
Sbjct: 7 LIWIDLEMTGLEPEQDRIIEMATIVTDPQLNILAEGPVIAVSQPKILLDSMDAWNTKQHN 66
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL K+VL S ++E +AE+ +EF+K+ V + GNS+ D FL KYMP+LA+ F
Sbjct: 67 QSGLVKRVLESNVSESQAEQLTIEFLKQYVDKGKSPMCGNSICQDRRFLYKYMPELAAYF 126
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ +DVSS+K L +RW P V KE KH ALDDI++SI EL YY+++
Sbjct: 127 HYRNLDVSSLKELVLRWRPELMNGV-VKESKHLALDDIKDSINELIYYRQHFI 178
>sp|Q5ZRY0|ORN_LEGPH Oligoribonuclease OS=Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=orn
PE=3 SV=1
Length = 187
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL+ E DRI+E+A I+TD +L EGP + + Q K LDSM W H
Sbjct: 7 LIWIDLEMTGLEPEQDRIIEMATIVTDPQLNILAEGPVIAVSQPKILLDSMDAWNTKQHN 66
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL K+VL S ++E +AE+ +EF+K+ V + GNS+ D FL KYMP+LA+ F
Sbjct: 67 QSGLVKRVLESNVSESQAEQLTIEFLKQYVDKGKSPMCGNSICQDRRFLYKYMPELAAYF 126
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ +DVSS+K L +RW P V KE KH ALDDI++SI EL YY+++
Sbjct: 127 HYRNLDVSSLKELVLRWRPELMNGV-VKESKHLALDDIKDSINELIYYRQHFI 178
>sp|A5IAI0|ORN_LEGPC Oligoribonuclease OS=Legionella pneumophila (strain Corby) GN=orn
PE=3 SV=1
Length = 187
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL+ E DRI+E+A I+TD +L EGP + + Q K LDSM W H
Sbjct: 7 LIWIDLEMTGLEPEQDRIIEMATIVTDPQLNILAEGPVIAVSQPKILLDSMDAWNTKQHN 66
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL K+VL S ++E +AE+ +EF+K+ V + GNS+ D FL KYMP+LA+ F
Sbjct: 67 QSGLVKRVLESNVSESQAEQLTIEFLKQYVDKGKSPMCGNSICQDRRFLYKYMPELAAYF 126
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ +DVSS+K L +RW P V KE KH ALDDI++SI EL YY+++
Sbjct: 127 HYRNLDVSSLKELVLRWRPELMNGV-VKESKHLALDDIKDSINELIYYRQHFI 178
>sp|Q5X1E6|ORN_LEGPA Oligoribonuclease OS=Legionella pneumophila (strain Paris) GN=orn
PE=3 SV=1
Length = 187
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL+ E DRI+E+A I+TD +L EGP + + Q K LDSM W H
Sbjct: 7 LIWIDLEMTGLEPEQDRIIEMATIVTDPQLNILAEGPVIAVSQPKILLDSMDAWNTKQHN 66
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL K+VL S ++E +AE+ +EF+K+ V + GNS+ D FL KYMP+LA+ F
Sbjct: 67 QSGLVKRVLESNVSESQAEQLTIEFLKQYVDKGKSPMCGNSICQDRRFLYKYMPELAAYF 126
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ +DVSS+K L +RW P V KE KH ALDDI++SI EL YY+++
Sbjct: 127 HYRNLDVSSLKELVLRWRPELMNGV-VKESKHLALDDIKDSINELIYYRQHFI 178
>sp|A3N1D8|ORN_ACTP2 Oligoribonuclease OS=Actinobacillus pleuropneumoniae serotype 5b
(strain L20) GN=orn PE=3 SV=1
Length = 184
Score = 159 bits (402), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/179 (47%), Positives = 113/179 (63%), Gaps = 3/179 (1%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E +RI+E+A I+TD L EGP L +HQ+ + L+ M +WC H
Sbjct: 9 LIWIDLEMTGLDPEKERIIEVATIVTDKDLNILAEGPVLTVHQSNDLLNKMSDWCIKTHT 68
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
+GL ++V S LTER E Q ++F+K+ V + GNSV D FL KYMPDLA F
Sbjct: 69 ENGLIERVKQSKLTERAVELQTIDFLKQWVPKGASPICGNSVAQDKRFLYKYMPDLADYF 128
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTNLKK 217
+ +DVS++K L RW P D +K+ H ALDDIRESI ELK+Y+ + NL+K
Sbjct: 129 HYRHLDVSTLKELARRWKP-DMLNAFNKKNTHLALDDIRESIEELKFYRTHFI--NLEK 184
>sp|A3QAD3|ORN_SHELP Oligoribonuclease OS=Shewanella loihica (strain ATCC BAA-1088 /
PV-4) GN=orn PE=3 SV=1
Length = 181
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+W+DLEMTGL+ EVDRI+EIA I+TD +L EGP + IHQ+++ L +M +W Q HH
Sbjct: 8 LIWVDLEMTGLEPEVDRIIEIATIVTDKELNILAEGPVIAIHQSEDVLAAMDDWNQKHHG 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL +V S +E++A +Q + F+ ++V + GNS+ D FL +YMP L F
Sbjct: 68 ESGLIDRVRASDFSEQDAIEQTIAFLSEHVPAGVSPMCGNSIGQDRRFLNRYMPTLEDYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVSS+K L RW P + K+ H+AL DI+ESI EL+YY+E +FK
Sbjct: 128 HYRNIDVSSVKELVRRWRP-EVMDGFKKQGTHQALVDIQESIAELRYYREKVFK 180
>sp|Q8ZIW9|ORN_YERPE Oligoribonuclease OS=Yersinia pestis GN=orn PE=3 SV=1
Length = 181
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL ++V S +R+AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 213
+ VDVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYVDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>sp|Q66FC2|ORN_YERPS Oligoribonuclease OS=Yersinia pseudotuberculosis serotype I (strain
IP32953) GN=orn PE=3 SV=1
Length = 181
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL ++V S +R+AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKTSPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 213
+ VDVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYVDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>sp|A7FMY7|ORN_YERP3 Oligoribonuclease OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=orn PE=3 SV=1
Length = 181
Score = 157 bits (398), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL ++V S +R+AE Q +EF+K+ V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKTSPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 213
+ VDVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ ++
Sbjct: 128 HYRYVDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQS 181
>sp|Q3IG97|ORN_PSEHT Oligoribonuclease OS=Pseudoalteromonas haloplanktis (strain TAC
125) GN=orn PE=3 SV=1
Length = 181
Score = 156 bits (395), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 108/176 (61%), Gaps = 1/176 (0%)
Query: 36 KMPLVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQN 95
K L+W+DLEMTGL+ E D+ILEIA ++TD L EGP + IHQ+ E LD+M EWC
Sbjct: 5 KSNLIWLDLEMTGLEPETDKILEIATVVTDADLNILAEGPTIAIHQSNELLDNMDEWCTT 64
Query: 96 HHEASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLA 155
H SGLT + S E A +Q + F+K+ V + GNS+ D F+ KYM +L
Sbjct: 65 QHGKSGLTARCKASTYDEAYAVEQTIAFLKQWVPAGASPMCGNSIGQDRRFMNKYMRELE 124
Query: 156 SLFSHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
F + +DVS+IK L RW P +V +K+ H ALDDI++SIMELK Y+E F
Sbjct: 125 DFFHYRNLDVSTIKELARRWKPEVLAQV-NKKGSHLALDDIKDSIMELKVYREKFF 179
>sp|A1SA28|ORN_SHEAM Oligoribonuclease OS=Shewanella amazonensis (strain ATCC BAA-1098 /
SB2B) GN=orn PE=3 SV=1
Length = 181
Score = 156 bits (395), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL+ EVDRILEIA ++TD L +GP + IHQ+ E L +M +W Q HH
Sbjct: 8 LIWIDLEMTGLEPEVDRILEIATLVTDQDLNILAQGPVIAIHQSDEVLAAMDDWNQQHHG 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
ASGL ++V S TE +A Q ++F+ +V + GNSV D FL KYM +L F
Sbjct: 68 ASGLIERVRSSQYTEADAIAQTIDFLSLHVPKGVSPMCGNSVGQDRRFLNKYMRELEDFF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS+IK L RW P + K K+ H+AL DI+ESI EL++Y++ +FK
Sbjct: 128 HYRNIDVSTIKELVKRWDP-EVMKGFKKQGTHQALLDIQESIAELQFYRDKVFK 180
>sp|Q6F805|ORN_ACIAD Oligoribonuclease OS=Acinetobacter sp. (strain ADP1) GN=orn PE=3
SV=1
Length = 183
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL + D+I+EIA IITD L EGP L +HQ L++M EW H
Sbjct: 9 LIWIDLEMTGLDTDNDQIIEIATIITDDHLNIVAEGPVLAVHQPDRILNAMDEWNTRQHG 68
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL ++V S LT R+ E Q +EF+KK V T + GNS+ D F+ + MP+L F
Sbjct: 69 QSGLIERVRRSKLTARDVELQTLEFLKKWVNPKTSPMCGNSICQDRRFMHRLMPELEQYF 128
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKTN 214
+ +DVSS+K L RW P + K H A+DDIR+SI ELKYY+E F N
Sbjct: 129 HYRNLDVSSVKELAKRWRPEIMSGL-KKNASHLAMDDIRDSISELKYYREYFFIKN 183
>sp|A1JIQ8|ORN_YERE8 Oligoribonuclease OS=Yersinia enterocolitica serotype O:8 / biotype
1B (strain 8081) GN=orn PE=3 SV=1
Length = 181
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP L +HQ+ E L M EW H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSDEQLGLMDEWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL ++V S + +AE Q +EF+K+ V T + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPICGNSVGQDRRFLFRYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-KKQNTHQALDDIRESVAELAYYREHFIQ 180
>sp|Q8K909|ORN_BUCAP Oligoribonuclease OS=Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg) GN=orn PE=3 SV=1
Length = 184
Score = 155 bits (391), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 113/175 (64%), Gaps = 3/175 (1%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E+ RI+EIA +ITD KL EGP + IHQ +E + M EW H+
Sbjct: 8 LIWIDLEMTGLNSEIHRIIEIATVITDTKLNIISEGPVIAIHQKEEHIVIMDEWNTKIHK 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
+GL K+V S E +AE + + F+KK V + + GNSVY D FL +YMP+L + F
Sbjct: 68 KNGLIKRVQKSIYNESKAESKTIFFLKKWVPIQSSPICGNSVYQDRKFLARYMPNLENYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 213
+ +DVS+IK L RW P ++K+ K+Q H AL+DI ESI+EL +YK+ F T
Sbjct: 128 HYRCIDVSTIKELVNRWCP-SFKKI--KKQNHTALEDIHESIIELNFYKKIFFDT 179
>sp|Q7MYS8|ORN_PHOLL Oligoribonuclease OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=orn PE=3 SV=1
Length = 181
Score = 154 bits (389), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA I+TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATIVTDANLNILDEGPVIAVHQSDEQLALMDKWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL ++V S + +REAEK +EF++K V + GNSV D FL +YMP+L + F
Sbjct: 68 GSGLVERVKASKIDDREAEKATIEFLEKWVPAGASPICGNSVSQDRRFLFRYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P + K+ H+ALDDIRES+ EL YY+E+ +
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGL-KKQNTHQALDDIRESVAELAYYREHFIQ 180
>sp|P0A784|ORN_ECOLI Oligoribonuclease OS=Escherichia coli (strain K12) GN=orn PE=1 SV=2
Length = 181
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>sp|P0A785|ORN_ECOL6 Oligoribonuclease OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=orn PE=3 SV=2
Length = 181
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>sp|A8A7Q9|ORN_ECOHS Oligoribonuclease OS=Escherichia coli O9:H4 (strain HS) GN=orn PE=3
SV=1
Length = 181
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>sp|A7ZV33|ORN_ECO24 Oligoribonuclease OS=Escherichia coli O139:H28 (strain E24377A /
ETEC) GN=orn PE=3 SV=1
Length = 181
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDDWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
ASGL ++V S + +REAE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 ASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+E+ K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILDGF-TKQGTHQAMDDIRESVAELAYYREHFIK 180
>sp|Q6LM23|ORN_PHOPR Oligoribonuclease OS=Photobacterium profundum GN=orn PE=3 SV=1
Length = 181
Score = 154 bits (388), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+W+DLEMTGL E+ +I+EIA I+TD +L EGP L IHQ++ L M +WC N H
Sbjct: 8 LIWVDLEMTGLDPEIHQIIEIATIVTDAQLNILAEGPVLAIHQSEAELAKMDDWCTNTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL +++ S TE +A +Q + F+++ V + GNS+ D FL K+MP+L F
Sbjct: 68 NSGLVERIRQSKFTEEDAIRQTIAFLEQWVPKGASPICGNSIGQDRRFLYKHMPELEQYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ +DVS+IK L RW P SK+ H ALDDI +SI EL+YY+E+IF
Sbjct: 128 HYRYLDVSTIKELTRRWQPELLEGF-SKKGSHLALDDIHDSIAELRYYREHIF 179
>sp|Q31HZ4|ORN_THICR Oligoribonuclease OS=Thiomicrospira crunogena (strain XCL-2) GN=orn
PE=3 SV=1
Length = 184
Score = 153 bits (387), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL + D+I+EIA ++TD +L EGP + I + LD M WC HH
Sbjct: 7 LIWIDLEMTGLDHKADQIIEIATVVTDAELNVLAEGPVMAIQTEQHYLDGMDAWCTTHHG 66
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGLTK+V S +T +AE++ ++F+K V + GNS+ D FL + MP+L F
Sbjct: 67 NSGLTKRVQESTITMAQAEQETIKFLKPYVPKGKSPMCGNSICQDRRFLIEQMPELEQFF 126
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIF 211
+ +DVSS+K L RW P Y K+ H ALDDI ESI ELKYY++N+F
Sbjct: 127 HYRNLDVSSLKELARRWAPTVYSGY-KKKGAHLALDDIYESIEELKYYRQNLF 178
>sp|A8AMN6|ORN_CITK8 Oligoribonuclease OS=Citrobacter koseri (strain ATCC BAA-895 / CDC
4225-83 / SGSC4696) GN=orn PE=3 SV=1
Length = 181
Score = 153 bits (386), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+WIDLEMTGL E DRI+EIA ++TD L EGP + +HQ+ E L M +W H
Sbjct: 8 LIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSAEQLALMDDWNVRTHT 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL +V S +R AE +EF+K+ V + GNS+ D FL KYMP+L + F
Sbjct: 68 GSGLVDRVKASSFDDRAAELATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYMPELEAYF 127
Query: 159 SHVLVDVSSIKALCMRWYPRDYRKVPSKEQKHRALDDIRESIMELKYYKENIFK 212
+ +DVS++K L RW P +K+ H+A+DDIRES+ EL YY+EN K
Sbjct: 128 HYRYLDVSTLKELARRWKPEILAGF-TKQGTHQAMDDIRESVAELAYYRENFIK 180
>sp|Q3SHU1|ORN_THIDA Oligoribonuclease OS=Thiobacillus denitrificans (strain ATCC 25259)
GN=orn PE=3 SV=1
Length = 182
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 111/177 (62%), Gaps = 5/177 (2%)
Query: 39 LVWIDLEMTGLKIEVDRILEIACIITDGKLTKSVEGPDLVIHQTKECLDSMGEWCQNHHE 98
L+W+D+EMTGL E DRI+E+A ++TD L EGP LV+HQ +D+M W + H
Sbjct: 8 LLWLDMEMTGLSPESDRIIELAIVVTDADLNTVAEGPVLVVHQPDAVMDAMDSWNRGTHG 67
Query: 99 ASGLTKKVLHSGLTEREAEKQVVEFVKKNVGTYTPLLAGNSVYVDFMFLKKYMPDLASLF 158
SGL +V S L+E +AE Q++EFVK++V T + GNS+ D F+ ++MP+L + F
Sbjct: 68 KSGLIDRVKASQLSESDAEAQMLEFVKQHVSPRTSPMCGNSICQDRRFMARHMPELEAFF 127
Query: 159 SHVLVDVSSIKALCMRWYPR--DYRKVPSKEQKHRALDDIRESIMELKYYKENIFKT 213
+ +DVS++K L RW P D K K KH AL DI ESI EL+YY+E+ +
Sbjct: 128 HYRNLDVSTLKELAKRWRPGLCDAFK---KSNKHEALADIYESIDELRYYREHFIRA 181
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,275,134
Number of Sequences: 539616
Number of extensions: 3011876
Number of successful extensions: 8993
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 8649
Number of HSP's gapped (non-prelim): 197
length of query: 217
length of database: 191,569,459
effective HSP length: 113
effective length of query: 104
effective length of database: 130,592,851
effective search space: 13581656504
effective search space used: 13581656504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)